Citrus Sinensis ID: 025252

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MVFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGFR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccEEEcccccccccccccHHHHHHHHHHHcccccccccccccEEEEccccc
Secondary Structure Prediction (SSPRO)
ccEEEEEEEccccccccHHHHHcccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEEEcEEcccHHHHHHHHHHHHHHHcccEEEEEccccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEEEcccccHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEcccEEEEccccccHHHHHHHHHHHHcHHHcccccEEEEEccccc
Coil and Loop (DISEMBL)
MVFKCLSlkidnnilptLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADklghqdvcyihcdvsnereVINLVDTTVAKFGKLDILVNsgcnleyrgfvsildtpksDLERLLAVNTIGGFLVAKHAARVmvprrrgcilyttgtgttacteieglcnipanyygvskFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYnmakdddtsyvgkqnllvnggfr
Flexible Loop (DISEMBL)
MVFKCLslkidnnilPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGflvakhaarvmvprrRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGFR
Low Complexity Region (SEG)
MVFKCLSLKIDNNILPTLSSYYRLQGRVaiitggasgigasaaQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYttgtgttACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLamaeaiasianaaLYNMAKDDDTSYVGKQNLLVNGGFR
Disordered region (IsUnstruct)
*VFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLV*****
Disordered Region (DISOPRED)
***********************LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGFR
Disordered Region (DISEMBL)
MVFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGFR
Disordered Region (DISPRO)
MVFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNG***
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGFR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q94K41	257	Short-chain dehydrogenase	yes	no	0.862	0.856	0.423	8e-40
Q7FAE1	274	Momilactone A synthase OS	no	no	0.870	0.810	0.424	7e-38
O80713	257	Short-chain dehydrogenase	no	no	0.850	0.844	0.419	1e-37
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.713	0.681	0.445	5e-36
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.854	0.731	0.415	3e-35
O80714	258	Short-chain dehydrogenase	no	no	0.858	0.848	0.397	3e-35
F4J300	259	Short-chain dehydrogenase	no	no	0.858	0.845	0.415	4e-35
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.866	0.775	0.371	1e-34
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.866	0.729	0.369	7e-33
P50160	336	Sex determination protein	N/A	no	0.733	0.556	0.427	7e-26

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  164 bits (414), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/260 (42%), Positives = 150/260 (57%), Gaps = 40/260 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G++ IITGGASGIGA + +LF ++GA+VVI DVQD LGQ +A  +G     Y HCDV
Sbjct: 5   RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDV 64

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE EV N V  TV K+GKLD+L ++   +E   FVSILD   ++L+R +A+N  G    
Sbjct: 65  TNETEVENAVKFTVEKYGKLDVLFSNAGVIEP--FVSILDLNLNELDRTIAINLRGTAAF 122

Query: 143 AKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            KHAAR MV +  RG I+ T    T+   EI G      + Y  SK G+LGL+KS +  L
Sbjct: 123 IKHAARAMVEKGIRGSIVCT----TSVAAEIAGTA---PHGYTTSKHGLLGLIKSASGGL 175

Query: 202 GRYGIRVDCVSHTYGLA-------------MAEAIAS--------------IANAALYNM 234
           G+YGIRV+ V+  +G+A             + E   S              +A AAL+  
Sbjct: 176 GKYGIRVNGVA-PFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALF-- 232

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
              D+++YV  QNL V+GG+
Sbjct: 233 LASDESAYVSGQNLAVDGGY 252

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  157 bits (397), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/259 (42%), Positives = 146/259 (56%), Gaps = 37/259 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           +L G+VA+ITGGASGIGA  A+LF K+GA+VV+AD+QD LG +L  +LG     Y+HCDV
Sbjct: 14  KLVGKVAVITGGASGIGACTARLFVKHGARVVVADIQDELGASLVAELGPDASSYVHCDV 73

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE +V   VD  VA+FGKLD++ N+   +       + +  K D ER+LAVN +G FL 
Sbjct: 74  TNEGDVAAAVDHAVARFGKLDVMFNN-AGVSGPPCFRMSECTKEDFERVLAVNLVGPFLG 132

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            KHAARVM P RRG I+ T    ++            ++ Y  SK  ++G  ++ A ELG
Sbjct: 133 TKHAARVMAPARRGSIISTASLSSSV-------SGAASHAYTTSKHALVGFTENAAGELG 185

Query: 203 RYGIRVDCVSH---TYGLAMA------EAIAS------------------IANAALYNMA 235
           R+GIRV+CVS       LA A      EAI +                  IA AAL+   
Sbjct: 186 RHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALF--L 243

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             DD  YV  QNL V+GG 
Sbjct: 244 ASDDGRYVSGQNLRVDGGL 262

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  156 bits (395), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/262 (41%), Positives = 143/262 (54%), Gaps = 45/262 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G++AIITGGASGIGA A +LF  +GAKVVI D Q+ LGQ +A  +G     +  CDV
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE+EV N V  TV K+GKLD+L ++   +E  G  S LD      +R +AVN  G    
Sbjct: 65  TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG--SFLDLNLEQFDRTMAVNVRGAAAF 122

Query: 143 AKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
            KHAAR MV +  RG I+ T    T+  +EI G    P  + Y  SK  +LGLVKS    
Sbjct: 123 IKHAARAMVEKGTRGSIVCT----TSVASEIGG----PGPHAYTASKHALLGLVKSACGG 174

Query: 201 LGRYGIRVDCVSHTYGLAMAEAIAS----------------------------IANAALY 232
           LG+YGIRV+ V+     A+A AI S                            +A AAL+
Sbjct: 175 LGKYGIRVNGVAP---YAVATAINSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALF 231

Query: 233 NMAKDDDTSYVGKQNLLVNGGF 254
                DD++YV  QNL V+GG+
Sbjct: 232 --LASDDSAYVSGQNLAVDGGY 251

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  151 bits (381), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 9/191 (4%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-GHQDVCYIHCD 81
           RL+G+VA++TGGASGIG S A+LF ++GAK+ I DVQD LGQ ++ +L G    CY HCD
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V+ E +V   VD T  K+G +DI+VN+   +     + I D   ++ +++  +N  G FL
Sbjct: 62  VTVEDDVRRAVDFTAEKYGTIDIMVNN-AGITGDKVIDIRDADFNEFKKVFDINVNGVFL 120

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
             KHAAR+M+P+ +G I+      +     I G    P  Y G +K  ++GL KS+AAEL
Sbjct: 121 GMKHAARIMIPKMKGSIVSLASVSSV----IAGAG--PHGYTG-AKHAVVGLTKSVAAEL 173

Query: 202 GRYGIRVDCVS 212
           GR+GIRV+CVS
Sbjct: 174 GRHGIRVNCVS 184

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  149 bits (375), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 143/260 (55%), Gaps = 42/260 (16%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G++AIITGGASGIGA A +LF  +GAKVVI D+Q+ LGQ LA  +G     +  C+V+
Sbjct: 44  LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +E +V N V  TV K GKLD+L ++   LE   F S+LD      +R +AVN  G     
Sbjct: 104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE--AFGSVLDLDLEAFDRTMAVNVRGAAAFI 161

Query: 144 KHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
           KHAAR MV    RG I+ T    T+   EI G    P  + Y  SK  +LGL++S  A L
Sbjct: 162 KHAARSMVASGTRGSIVCT----TSIAAEIGG----PGPHSYTASKHALLGLIRSACAGL 213

Query: 202 GRYGIRVDCVSHTYGLAM-----------------AEAIAS----------IANAALYNM 234
           G+YGIRV+ V+  YG+A                   EA+ +          IA AAL+  
Sbjct: 214 GQYGIRVNGVA-PYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALF-- 270

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
              DD+ Y+  QNL+V+GGF
Sbjct: 271 LASDDSVYISGQNLVVDGGF 290

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  148 bits (374), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/259 (39%), Positives = 142/259 (54%), Gaps = 40/259 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G++ IITGGASGIGA AA+LF  +GAKVVI DVQ+ LGQ +A  +G     +  CDV
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE EV + V  TV K GKLD+L ++   LE     S LD      +R++AVN  G    
Sbjct: 65  TNETEVEDAVKFTVEKHGKLDVLFSNAGVLEP--LESFLDFDLERFDRIMAVNVRGAAAF 122

Query: 143 AKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            KHAAR MV +  RG I+ T    T+   EI G      + Y  SK G++GL++S   +L
Sbjct: 123 IKHAARAMVEKGTRGSIVCT----TSVSAEIGG----GHHGYTASKHGLVGLIRSACGDL 174

Query: 202 GRYGIRVDCVSHTYGLA--------------------------MAEAIASIANAALYNMA 235
           G+YGIRV+ V+  Y +A                          M    + +A  AL+  +
Sbjct: 175 GKYGIRVNGVA-PYAVATPMTSHDEVTGKQLEDYFDAKGILKGMVLKASHVAQVALFLAS 233

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             DD++Y+  QNL V+GG+
Sbjct: 234 --DDSAYISGQNLAVDGGY 250

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  148 bits (374), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/260 (41%), Positives = 142/260 (54%), Gaps = 41/260 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G++ IITGGASGIGA AA+LF  +GAKVVI D+Q+ LGQ +A  +G     +  CD+
Sbjct: 5   RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDI 64

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++E EV N V  TV K GKLD+L ++   +E  G  SILD      +R +AVN  G    
Sbjct: 65  TDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG--SILDLDLEAFDRTMAVNVRGAAAF 122

Query: 143 AKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
            KHAAR MV    RG I+ T    T+   EI G    P  + Y  SK  +LGLV+S    
Sbjct: 123 IKHAARSMVASGTRGSIVCT----TSVTAEIGG----PGPHSYTASKHALLGLVRSACGG 174

Query: 201 LGRYGIRVDCVSHTYGLA------------MAEAIAS--------------IANAALYNM 234
           LG+YGIRV+ V+  YG+A            M E   S              +A+AAL+  
Sbjct: 175 LGKYGIRVNGVA-PYGVATGLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALF-- 231

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
              DD+ Y+  QNL V+GG+
Sbjct: 232 LASDDSVYISGQNLGVDGGY 251

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  146 bits (369), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 140/269 (52%), Gaps = 48/269 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYI 78
           RL G+VA+ITGGA+GIG S  +LFHK+GAKV I D+QD+LG  +   L      +   +I
Sbjct: 17  RLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFI 76

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           H DV  E ++ N VD  V  FG LDIL+N+   L       I +   S+ E    VN  G
Sbjct: 77  HGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL  KHAARVM+P ++G I+       + C+    +  +  + Y  SK  +LGL +S+A
Sbjct: 136 AFLSMKHAARVMIPEKKGSIV-------SLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVA 188

Query: 199 AELGRYGIRVDCVSHTYGLAMAEAIA---------------------------------S 225
           AELG++GIRV+CVS  Y +A   A+A                                  
Sbjct: 189 AELGQHGIRVNCVS-PYAVATKLALAHLPEEERTEDAFVGFRNFAAANANLKGVELTVDD 247

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           +ANA L+     DD+ Y+   NL+++GGF
Sbjct: 248 VANAVLF--LASDDSRYISGDNLMIDGGF 274

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  140 bits (354), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/273 (36%), Positives = 141/273 (51%), Gaps = 52/273 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD----VCYI 78
           RL+G+VAIITGGA GIG +   LF ++GA VVIADV +  G +LA  L        V +I
Sbjct: 31  RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNL-EYRGFVSILDTPKSDLERLLAVNTI 137
            CDVS E +V NLV+ TVA++G+LDIL N+   L + +   SILD    + + ++ VN  
Sbjct: 91  SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query: 138 GGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
           G  L  KH AR M+ R  +GCI+ T             +  +  + Y  SK  I+GL K+
Sbjct: 151 GVGLGMKHGARAMIKRGFKGCIISTASVAGV-------MGGMGPHAYTASKHAIVGLTKN 203

Query: 197 LAAELGRYGIRVDCVSHTYGLAMAEAIAS------------------------------- 225
            A ELG+YGIRV+C+S  +G+A +  + +                               
Sbjct: 204 AACELGKYGIRVNCIS-PFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGET 262

Query: 226 -----IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                IA AALY     D++ YV   NL+V+GG
Sbjct: 263 LRANDIAEAALY--LASDESKYVNGHNLVVDGG 293

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  117 bits (293), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 118/199 (59%), Gaps = 12/199 (6%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+VAI+TGGA GIG +  +LF K+GA+VVIAD+ D  G+ALA  LG Q V ++ CDV
Sbjct: 52  RLDGKVAIVTGGARGIGEAIVRLFAKHGARVVIADIDDAAGEALASALGPQ-VSFVRCDV 110

Query: 83  SNEREVINLVDTTVAKF-GKLDILVNSGCNL--EYRGFVSILDTPKSDLERLLAVNTIGG 139
           S E +V   VD  +++  G+LD+  N+   L  + R   SIL    ++ +R+L VN +G 
Sbjct: 111 SVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGA 170

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
            L  KHAAR M PRR G I+               L  +  + Y  SK  I+GL K+ A 
Sbjct: 171 ALGMKHAARAMAPRRAGSIVSVASVAAV-------LGGLGPHAYTASKHAIVGLTKNAAC 223

Query: 200 ELGRYGIRVDCVSHTYGLA 218
           EL  +G+RV+CVS  +G+A
Sbjct: 224 ELRAHGVRVNCVS-PFGVA 241

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
224088424	274	predicted protein [Populus trichocarpa]	0.894	0.832	0.555	1e-63
297740170	245	unnamed protein product [Vitis vinifera]	0.882	0.918	0.563	9e-63
225440773	275	PREDICTED: momilactone A synthase-like [	0.878	0.814	0.530	8e-61
255579335	288	short chain alcohol dehydrogenase, putat	0.949	0.840	0.489	9e-59
380039552	275	tropinone reductase-like 2 [Erythroxylum	0.874	0.810	0.518	1e-58
380039550	272	tropinone reductase-like 1 [Erythroxylum	0.874	0.819	0.521	2e-58
6683479	273	wts2L [Citrullus lanatus]	0.866	0.809	0.503	2e-55
449437438	273	PREDICTED: zerumbone synthase-like [Cucu	0.854	0.798	0.467	5e-53
284192458	276	secoisolariciresinol dehydrogenase [Sino	0.858	0.793	0.469	7e-49
255578619	282	short chain alcohol dehydrogenase, putat	0.870	0.787	0.433	6e-46

>gi|224088424|ref|XP_002308449.1| predicted protein [Populus trichocarpa] gi|222854425|gb|EEE91972.1| predicted protein [Populus trichocarpa]

 Score =  249 bits (635), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 146/263 (55%), Positives = 183/263 (69%), Gaps = 35/263 (13%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC 76
           +++S  RL G+V+IITGGASGIGASA QLFH+NGAKVV+AD+QD LGQALA KLG +DVC
Sbjct: 6   SVASQKRLAGKVSIITGGASGIGASAVQLFHENGAKVVLADIQDTLGQALAQKLG-EDVC 64

Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
           YIHCDVSNE EV NLVD TV K+GKLDI+ N+   L  R   SILD PKSDL+RL++VN 
Sbjct: 65  YIHCDVSNEDEVSNLVDATVKKYGKLDIMYNNAGILG-RPLGSILDAPKSDLDRLISVNL 123

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
           +G FL AKHAAR+MV + +GCIL+T     +ACT I GL   PA  Y V+K GI+GL K+
Sbjct: 124 VGCFLGAKHAARIMVTQGQGCILFT----ASACTAIGGLAT-PA--YAVTKHGIVGLAKN 176

Query: 197 LAAELGRYGIRVDCVSHTYGLA--------------MAEAIASIAN-----AALYNMAK- 236
           LAAELG+YGIRV+CVS  YG+A              + E++  + N       + +MAK 
Sbjct: 177 LAAELGQYGIRVNCVS-PYGVATPMYEGFSADTAPMIEESLGQMGNLKGKIPKVEDMAKA 235

Query: 237 -----DDDTSYVGKQNLLVNGGF 254
                 D+ +YV   NL+V+GGF
Sbjct: 236 ALYLASDEANYVSGMNLVVDGGF 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297740170|emb|CBI30352.3| unnamed protein product [Vitis vinifera]

 Score =  246 bits (627), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 137/243 (56%), Positives = 178/243 (73%), Gaps = 18/243 (7%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           + S +RL+G+VAI+TGGASGIGAS  +LF +NGAKV+IAD+QD+LGQ + +KLG QDV Y
Sbjct: 1   MYSIFRLEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLG-QDVSY 59

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           IHCDVSNE +V NLVDTT++K G+LDI+ N+   L+ R   SILDT KSDL+RL+ VN +
Sbjct: 60  IHCDVSNEDDVQNLVDTTISKHGRLDIMYNNAGILD-RHLGSILDTQKSDLDRLIGVNLV 118

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G FL AKHAARVM+P+++GCIL+T     + CT I G   I  + Y V+K+GI GL ++L
Sbjct: 119 GSFLGAKHAARVMIPQKKGCILFT----ASCCTSIAG---ISTHSYAVTKYGIWGLARNL 171

Query: 198 AAELGRYGIRVDCVSHTYGLAMA---EAIAS---IANAALYNMAKDDDTSYVGKQNLLVN 251
           AAELG+YGIRV+CVS  YGL      + + S   +A AALY     D+ SYV   NL+V+
Sbjct: 172 AAELGQYGIRVNCVS-PYGLITGMGQQGLTSEEGVARAALY--LASDEASYVSGLNLVVD 228

Query: 252 GGF 254
           GGF
Sbjct: 229 GGF 231

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225440773|ref|XP_002275768.1| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  239 bits (610), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/264 (53%), Positives = 177/264 (67%), Gaps = 40/264 (15%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
           S   RL+G+VAI+TGGASGIGAS  +LF +NGAKV+IAD+QD+LGQ + +KLG QDV YI
Sbjct: 10  SPSKRLEGKVAIVTGGASGIGASTVRLFWENGAKVIIADIQDDLGQDITNKLG-QDVSYI 68

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           HCDVSNE +V NLVDTT++K G+LDI+ N+   L+ R   SILDT KSDL+RL+ VN +G
Sbjct: 69  HCDVSNEDDVQNLVDTTISKHGRLDIMYNNAGILD-RHLGSILDTQKSDLDRLIGVNLVG 127

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL AKHAARVM+P+++GCIL+T     + CT I G   I  + Y V+K+GI GL ++LA
Sbjct: 128 SFLGAKHAARVMIPQKKGCILFT----ASCCTSIAG---ISTHSYAVTKYGIWGLARNLA 180

Query: 199 AELGRYGIRVDCVSHTYGL--------------AMAEAIAS--------------IANAA 230
           AELG+YGIRV+CVS  YGL                AEA  S              +A AA
Sbjct: 181 AELGQYGIRVNCVS-PYGLITGMGQQGLTSEEVEAAEASLSEMGNLKGEVLKSEGVARAA 239

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           LY     D+ SYV   NL+V+GGF
Sbjct: 240 LY--LASDEASYVSGLNLVVDGGF 261

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255579335|ref|XP_002530512.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223529916|gb|EEF31844.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  232 bits (592), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 137/280 (48%), Positives = 188/280 (67%), Gaps = 38/280 (13%)

Query: 2   VFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN 61
           +F    +K+   +  ++ +Y+RL G+VAIITGGASGIGAS  +LFH NGAKVVIAD+QD 
Sbjct: 1   MFLPHPVKVVQWVNGSIPNYFRLAGKVAIITGGASGIGASTVKLFHGNGAKVVIADIQDE 60

Query: 62  LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL 121
           LGQA+A+ LG +DV Y+HCDV NE E+ N+VDTTV+K+GKLDI+ N+   ++ R   SIL
Sbjct: 61  LGQAIAENLG-EDVFYMHCDVRNEDEISNVVDTTVSKYGKLDIMYNNAGVID-RYLGSIL 118

Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           D+ KS+L+RLL+VN +G FL AKHAARVMV + +GCIL+T    ++ACT I G+   P  
Sbjct: 119 DSTKSELDRLLSVNVVGAFLGAKHAARVMVKQGKGCILFT----SSACTAIGGISTHP-- 172

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT------YGLAMAEAIA----------- 224
            Y V+K+GI+GL K+LAAELG++GIRV+CVS +       G+ ++EA             
Sbjct: 173 -YAVTKYGIVGLSKNLAAELGQHGIRVNCVSPSGVVTPIAGVTLSEAEIASAEAAISAVG 231

Query: 225 ----------SIANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                      +A AALY     D+ +YV   NL+V+GG+
Sbjct: 232 NLKGQVLRPEDVAKAALY--LASDEANYVSGLNLVVDGGY 269

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039552|gb|AFD32320.1| tropinone reductase-like 2 [Erythroxylum coca]

 Score =  232 bits (592), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 137/264 (51%), Positives = 175/264 (66%), Gaps = 41/264 (15%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHC 80
           + RL+G+VAIITGGASGIGA  A+LFH+NGAKVVIAD+QD+LGQALA KLG +  CYIHC
Sbjct: 8   HKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGK-ACYIHC 66

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGG 139
           DVS E EVINLVDTTVAK+G+LDI+ N+   +E +G  VS++++ KSDL+RLL+VN  G 
Sbjct: 67  DVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGA 126

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           FL AKHA RVMV +R+GCIL+T    ++ CT I GL     + Y  SK G+ GL K+L  
Sbjct: 127 FLGAKHATRVMVQQRKGCILFT----SSVCTSIAGL---SGHAYAASKSGVCGLAKNLTP 179

Query: 200 ELGRYGIRVDCVSHTYGLA---------------MAEAIAS--------------IANAA 230
           ELG+YGIRV+C+S  YGL                  EA+ S              IA AA
Sbjct: 180 ELGKYGIRVNCIS-PYGLVTGVSNVSGEGEANREFVEAMLSELGTLSGQTLRADGIAKAA 238

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           L+     D+  YV   N++V+GG+
Sbjct: 239 LF--LASDEAYYVSGINMVVDGGY 260

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039550|gb|AFD32319.1| tropinone reductase-like 1 [Erythroxylum coca]

 Score =  231 bits (590), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/261 (52%), Positives = 176/261 (67%), Gaps = 38/261 (14%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHC 80
           + RL+G+VAIITGGASGIGA  A+LFH+NGAKVVIAD+QD+LGQALA KLG +  CYIHC
Sbjct: 8   HKRLEGKVAIITGGASGIGACTAELFHENGAKVVIADIQDDLGQALATKLGGK-ACYIHC 66

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGG 139
           DVS E +VINLVDTTVAK+G+LDI+ N+   +E +G  VS++++ KSDL+RLL+VN  G 
Sbjct: 67  DVSKEDDVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGA 126

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           FL AKHA RVMV +R+GCIL+T    ++ CT I GL     + Y  SK G+ GL K+L  
Sbjct: 127 FLGAKHATRVMVQQRKGCILFT----SSLCTSIAGL---SGHAYAASKSGVCGLAKNLTP 179

Query: 200 ELGRYGIRVDCVSHTYGLA------------MAEAIAS--------------IANAALYN 233
           ELG+YGIRV+C+S  YGL             + EA+ S              IA AAL+ 
Sbjct: 180 ELGKYGIRVNCIS-PYGLVTGISNISEANRELVEAMLSELGTLSGQTLRADGIAKAALF- 237

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
               D+  YV   N++V+GG+
Sbjct: 238 -LASDEAYYVSGINMVVDGGY 257

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|6683479|dbj|BAA89230.1| wts2L [Citrullus lanatus]

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/258 (50%), Positives = 169/258 (65%), Gaps = 37/258 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+VAIITGGASGIG SA ++FH+NGAKV+IAD+QD +GQ +AD+LG  DV YIHCDV
Sbjct: 12  RLDGKVAIITGGASGIGTSAVRIFHENGAKVIIADIQDEIGQKIADELG-DDVSYIHCDV 70

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S E +V NLVD  V + GKLDI+ ++   L+ R F  ILD  KSDL+++L VN +G F  
Sbjct: 71  SKEDDVSNLVDAAVHRHGKLDIMYSNAGVLD-RSFSGILDVTKSDLDKVLGVNVMGAFWG 129

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           AKHAARVM+P + GCIL+T    ++A T I GL + P   Y  SK  +LGLV++LAAELG
Sbjct: 130 AKHAARVMIPEKNGCILFT----SSATTNIAGLSSHP---YAASKCAVLGLVRNLAAELG 182

Query: 203 RYGIRVDCVSH---TYGLA------MAEAIAS-----------------IANAALYNMAK 236
           ++GIRV+CV+      G+A       AEA+ +                 IA AALY    
Sbjct: 183 QHGIRVNCVAPFVVATGIAGSRDPMQAEALETMVTTWANLKGRVLKADDIAKAALY--LA 240

Query: 237 DDDTSYVGKQNLLVNGGF 254
            DD +YV   NL+V+GG+
Sbjct: 241 SDDANYVSGLNLVVDGGY 258

Source: Citrullus lanatus

Species: Citrullus lanatus

Genus: Citrullus

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449437438|ref|XP_004136499.1| PREDICTED: zerumbone synthase-like [Cucumis sativus] gi|449515867|ref|XP_004164969.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]

 Score =  213 bits (543), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/261 (46%), Positives = 170/261 (65%), Gaps = 43/261 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G+VAIITGGASGIGASA ++FH+NGAK++IAD+QD +GQ +AD+LG +DV Y+HCDV
Sbjct: 12  RLEGKVAIITGGASGIGASAVRIFHENGAKIIIADIQDEVGQKIADELG-EDVSYLHCDV 70

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S E +V N+VD  V + GKLDI+ ++   ++ R F  ILD  KSDL+++L+VN +G F  
Sbjct: 71  SKEEDVSNVVDAAVYRHGKLDIMYSNAGVID-RSFSGILDVTKSDLDKVLSVNVMGAFWG 129

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           AKHAARVM+P++ GCIL+T    +++ T I GL + P   Y  SK  +LGLV++L  ELG
Sbjct: 130 AKHAARVMIPQKNGCILFT----SSSTTNIAGLSSHP---YASSKCAVLGLVRNLCVELG 182

Query: 203 RYGIRVDCVSHTYGLAMAEAIA-----------------------------SIANAALYN 233
           ++GIRV+CV+      +A AIA                              IA AALY 
Sbjct: 183 QHGIRVNCVAP---FVVATAIAGPRNPMQVEALETMVTSWANLKGCVLKADDIAKAALYL 239

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
           ++  D+  YV   NL+V+GG+
Sbjct: 240 VS--DEAKYVSGLNLVVDGGY 258

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|284192458|gb|ADB82907.1| secoisolariciresinol dehydrogenase [Sinopodophyllum hexandrum]

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/260 (46%), Positives = 162/260 (62%), Gaps = 41/260 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G+VAIITGGASGIG +  +LF  +GAKVVIADVQD+LGQ L ++L +  + Y+HCDV
Sbjct: 12  RLEGKVAIITGGASGIGEAVVRLFWIHGAKVVIADVQDDLGQTLCNELDNNSI-YVHCDV 70

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE ++  +VD  V KFGKLDI+ N+   L+ +   SIL   K D+ER+L VN IGGF+ 
Sbjct: 71  TNEDDLSKVVDLAVEKFGKLDIMSNNPGILDTK-TTSILSINKEDIERVLNVNLIGGFMG 129

Query: 143 AKHAARVMVPRRRGCILYT-TGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           AKHAARVMVP R+GCIL+T + T + AC    G        Y  SK G++GLV ++AAEL
Sbjct: 130 AKHAARVMVPARKGCILFTGSATASIACPMRHG--------YVASKQGLVGLVHNIAAEL 181

Query: 202 GRYGIRVDCVSHTYGLAM-----------AEAIASI----------------ANAALYNM 234
           G+YGIRV+C+S  Y +A             E ++S                 A AALY  
Sbjct: 182 GQYGIRVNCIS-PYAVATTMMKNVIPHESPEQLSSFLSGTGNLKGAVLRVDNARAALY-- 238

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
              D+  YV  QNL ++GG+
Sbjct: 239 LASDEAQYVSGQNLALDGGY 258

Source: Sinopodophyllum hexandrum

Species: Sinopodophyllum hexandrum

Genus: Sinopodophyllum

Family: Berberidaceae

Order: Ranunculales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578619|ref|XP_002530171.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223530332|gb|EEF32226.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  190 bits (482), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/263 (43%), Positives = 157/263 (59%), Gaps = 41/263 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHC 80
           RLQG+VA+ITGGASG+G S+A+LF K+GAKVV+ADVQD LG +L  +LG   + + YIHC
Sbjct: 13  RLQGKVALITGGASGMGESSARLFVKHGAKVVVADVQDELGHSLCRELGPDQEIISYIHC 72

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV+ + +V N VD  V+K+GKLDI+  S   +    + SI+DT   D +R+  +N  G F
Sbjct: 73  DVTCDSDVQNAVDFAVSKYGKLDIMF-SNAGVAGNVYPSIVDTENEDFKRVFDINVFGAF 131

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           L AKHAARVM+P ++GCIL+T       C+ +   C    + Y  SK  ILGL K+L+ E
Sbjct: 132 LAAKHAARVMIPAKKGCILFT-------CSYLSVSCFQAIHPYVASKHAILGLSKNLSVE 184

Query: 201 LGRYGIRVDCVS----------HTYGLAMAE-------------------AIASIANAAL 231
           LG++GIRV+CVS             G+  AE                       IA AAL
Sbjct: 185 LGQHGIRVNCVSPFVVITPMMRKAMGVMEAEKEKLQEVVSASANLKNVTLEAEDIAEAAL 244

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y ++  D++ YV   NL+V+GG+
Sbjct: 245 YLVS--DESKYVSGMNLVVDGGY 265

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.709	0.704	0.424	1.1e-33
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.768	0.687	0.380	1.1e-29
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.717	0.603	0.387	3.7e-29
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.760	0.646	0.312	1.5e-26
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.725	0.539	0.324	5.1e-26
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.705	0.700	0.395	6.6e-26
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.705	0.588	0.322	1.7e-25
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.705	0.697	0.382	1.6e-24
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.721	0.710	0.385	2.6e-24
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.717	0.614	0.382	6.8e-24

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 329 (120.9 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
 Identities = 81/191 (42%), Positives = 108/191 (56%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             RL G++               +LF ++GA+VVI DVQD LGQ +A  +G     Y HCDV
Sbjct:     5 RLDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDV 64

Query:    83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
             +NE EV N V  TV K+GKLD+L ++   +E   FVSILD   ++L+R +A+N  G    
Sbjct:    65 TNETEVENAVKFTVEKYGKLDVLFSNAGVIE--PFVSILDLNLNELDRTIAINLRGTAAF 122

Query:   143 AKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
              KHAAR MV +  RG I+           EI G    P  Y   SK G+LGL+KS +  L
Sbjct:   123 IKHAARAMVEKGIRGSIVCTTS----VAAEIAGTA--PHGYT-TSKHGLLGLIKSASGGL 175

Query:   202 GRYGIRVDCVS 212
             G+YGIRV+ V+
Sbjct:   176 GKYGIRVNGVA 186

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 290 (107.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
 Identities = 81/213 (38%), Positives = 114/213 (53%)

Query:     6 LSLKIDNNILPTLSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQA 65
             +S   +++   +L S  RL G+V               +LFHK+GAKV I D+QD+LG  
Sbjct:     1 MSTNTESSSYSSLPSQ-RLLGKVALITGGATGIGESIVRLFHKHGAKVCIVDLQDDLGGE 59

Query:    66 LADKL--GH--QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL 121
             +   L  G   +   +IH DV  E ++ N VD  V  FG LDIL+N+   L       I 
Sbjct:    60 VCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFGTLDILINNA-GLCGAPCPDIR 118

Query:   122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNI--P 179
             +   S+ E    VN  G FL  KHAARVM+P ++G I+         C+ + G+     P
Sbjct:   119 NYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEKKGSIV-------SLCS-VGGVVGGVGP 170

Query:   180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
              +Y G SK  +LGL +S+AAELG++GIRV+CVS
Sbjct:   171 HSYVG-SKHAVLGLTRSVAAELGQHGIRVNCVS 202

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 3.7e-29, Sum P(2) = 3.7e-29
 Identities = 76/196 (38%), Positives = 108/196 (55%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLG-HQD---VCYI 78
             RL+G+V                LF ++GA VVIADV +  G +LA  L  H+    V +I
Sbjct:    31 RLEGKVAIITGGAHGIGKATVMLFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFI 90

Query:    79 HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNL-EYRGFVSILDTPKSDLERLLAVNTI 137
              CDVS E +V NLV+ TVA++G+LDIL N+   L + +   SILD    + + ++ VN  
Sbjct:    91 SCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVR 150

Query:   138 GGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKS 196
             G  L  KH AR M+ R  +GCI+        +   + G   +  + Y  SK  I+GL K+
Sbjct:   151 GVGLGMKHGARAMIKRGFKGCII-----STASVAGVMG--GMGPHAYTASKHAIVGLTKN 203

Query:   197 LAAELGRYGIRVDCVS 212
              A ELG+YGIRV+C+S
Sbjct:   204 AACELGKYGIRVNCIS 219

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 265 (98.3 bits), Expect = 1.5e-26, Sum P(2) = 1.5e-26
 Identities = 66/211 (31%), Positives = 112/211 (53%)

Query:     6 LSLKIDNNILPTLSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQA 65
             +S  I + +L + SS  +L+G+V               + F   GA+V+I D+ +  G  
Sbjct:    19 ISKPIRSTLLYSTSSR-KLEGKVAVITGGASGIGKATAEEFVSQGAQVIIVDIDEEAGHM 77

Query:    66 LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSG---CNLEYRGFVSILD 122
             +A +LG     ++ CDV+ E ++   V+T V + GKLD+++NS    C++      SI D
Sbjct:    78 VATELGSA-AHFLRCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPP---SIAD 133

Query:   123 TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCN-IPAN 181
                   ++++ +N  G  L  KHAAR M+P   G IL          + I GL   +  +
Sbjct:   134 LDMDTYDKVMRLNVRGTVLGIKHAARAMIPAGSGSIL--------CLSSISGLMGGLGPH 185

Query:   182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
              Y +SKF I G+VK++A+EL ++G+R++C+S
Sbjct:   186 AYSISKFTIPGVVKTVASELCKHGLRINCIS 216

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 253 (94.1 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
 Identities = 63/194 (32%), Positives = 102/194 (52%)

Query:    19 SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
             S+  +L+G+V                 F  +GAKV+IAD+Q  +G+    +LG     Y 
Sbjct:    73 STSRKLEGKVALITGGASGIGKATAGKFISHGAKVIIADIQPQIGRETEQELG-PSCAYF 131

Query:    79 HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
              CDV+ E ++ N VD  V+   KLDI+ N+   +  +   SI+D   +  ++++  N  G
Sbjct:   132 PCDVTKESDIANAVDFAVSLHTKLDIMYNNA-GIPCKTPPSIVDLDLNVFDKVINTNVRG 190

Query:   139 GFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
                  KHAARVM+PR  G I+        + T + G   +  + Y VSK  ++G+V+S A
Sbjct:   191 VMAGIKHAARVMIPRNSGSIICAG-----SVTGMMG--GLAQHTYSVSKSAVIGIVRSTA 243

Query:   199 AELGRYGIRVDCVS 212
             +EL ++ IRV+C+S
Sbjct:   244 SELCKHRIRVNCIS 257

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 76/192 (39%), Positives = 101/192 (52%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             RL G++               +LF  +GAKVVI D Q+ LGQ +A  +G     +  CDV
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDV 64

Query:    83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
             +NE+EV N V  TV K+GKLD+L ++   +E  G  S LD      +R +AVN  G    
Sbjct:    65 TNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG--SFLDLNLEQFDRTMAVNVRGAAAF 122

Query:   143 AKHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
              KHAAR MV +  RG I+          +EI G    P  + Y  SK  +LGLVKS    
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTS----VASEIGG----PGPHAYTASKHALLGLVKSACGG 174

Query:   201 LGRYGIRVDCVS 212
             LG+YGIRV+ V+
Sbjct:   175 LGKYGIRVNGVA 186

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 264 (98.0 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
 Identities = 62/192 (32%), Positives = 102/192 (53%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             +L+G+V                 F ++GA+VVIAD+    G   A +LG  +  ++ CDV
Sbjct:    40 KLEGKVALITGGASGLGKATASEFLRHGARVVIADLDAETGTKTAKELG-SEAEFVRCDV 98

Query:    83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
             + E ++   V+ TV ++GKLD++ N+   +      SI     ++ ER++ +N  G    
Sbjct:    99 TVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSG 158

Query:   143 AKHAARVMVPRRRGCILYXXXXXXXACTE-IEGLCN-IPANYYGVSKFGILGLVKSLAAE 200
              KHAA+ M+P R GCIL         CT  + G+   +  + Y +SKF   G+VKS A+E
Sbjct:   159 IKHAAKFMIPARSGCIL---------CTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASE 209

Query:   201 LGRYGIRVDCVS 212
             L  +G+R++C+S
Sbjct:   210 LCEHGVRINCIS 221

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
 Identities = 73/191 (38%), Positives = 101/191 (52%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             RL+G++               +LF  +GAKVVI DVQ+ LGQ +A  +G     +  CDV
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDV 64

Query:    83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
             +NE EV + V  TV K GKLD+L ++   LE     S LD      +R++AVN  G    
Sbjct:    65 TNETEVEDAVKFTVEKHGKLDVLFSNAGVLE--PLESFLDFDLERFDRIMAVNVRGAAAF 122

Query:   143 AKHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
              KHAAR MV +  RG I+           EI G      + Y  SK G++GL++S   +L
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVSA----EIGG----GHHGYTASKHGLVGLIRSACGDL 174

Query:   202 GRYGIRVDCVS 212
             G+YGIRV+ V+
Sbjct:   175 GKYGIRVNGVA 185

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 76/197 (38%), Positives = 102/197 (51%)

Query:    23 RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             RL G++               +LF  +GAKVVI D+Q+ LGQ +A  +G     +  CD+
Sbjct:     5 RLDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDI 64

Query:    83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
             ++E EV N V  TV K GKLD+L ++   +E  G  SILD      +R +AVN  G    
Sbjct:    65 TDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG--SILDLDLEAFDRTMAVNVRGAAAF 122

Query:   143 AKHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
              KHAAR MV    RG I+           EI G    P  + Y  SK  +LGLV+S    
Sbjct:   123 IKHAARSMVASGTRGSIVCTTSVTA----EIGG----PGPHSYTASKHALLGLVRSACGG 174

Query:   201 LGRYGIRVDCVSHTYGL 217
             LG+YGIRV+ V+  YG+
Sbjct:   175 LGKYGIRVNGVA-PYGV 190

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 274 (101.5 bits), Expect = 6.8e-24, P = 6.8e-24
 Identities = 75/196 (38%), Positives = 102/196 (52%)

Query:    24 LQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
             L G++               +LF  +GAKVVI D+Q+ LGQ LA  +G     +  C+V+
Sbjct:    44 LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 103

Query:    84 NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
             +E +V N V  TV K GKLD+L ++   LE   F S+LD      +R +AVN  G     
Sbjct:   104 DETDVENAVKFTVEKHGKLDVLFSNAGVLE--AFGSVLDLDLEAFDRTMAVNVRGAAAFI 161

Query:   144 KHAARVMVPR-RRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
             KHAAR MV    RG I+           EI G    P  + Y  SK  +LGL++S  A L
Sbjct:   162 KHAARSMVASGTRGSIVCTTSIAA----EIGG----PGPHSYTASKHALLGLIRSACAGL 213

Query:   202 GRYGIRVDCVSHTYGL 217
             G+YGIRV+ V+  YG+
Sbjct:   214 GQYGIRVNGVA-PYGV 228

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q94K41	SDR3B_ARATH	1, ., 1, ., 1, ., -	0.4230	0.8627	0.8560	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	9e-70
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	5e-61
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-44
cd05233	234	cd05233, SDR_c, classical (c) SDRs	4e-44
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-42
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-40
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-38
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	1e-37
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	7e-36
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	1e-35
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-34
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-34
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	2e-33
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-33
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	5e-33
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	9e-33
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-32
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	7e-32
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-31
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	3e-30
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	4e-30
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	4e-30
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-30
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	6e-30
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	8e-30
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-29
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-29
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-29
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	2e-29
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	2e-29
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	3e-29
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-29
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-28
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	2e-28
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-27
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-27
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-27
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	5e-27
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	5e-27
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-26
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	2e-26
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-26
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-26
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	3e-26
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	3e-26
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	4e-26
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	6e-26
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	1e-25
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	2e-25
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	2e-25
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	2e-25
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	3e-25
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	4e-25
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	6e-25
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-24
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	4e-24
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	7e-24
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	8e-24
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	9e-24
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	1e-23
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	6e-23
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	1e-22
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-22
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	3e-22
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	4e-22
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	6e-22
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	6e-22
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	6e-22
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	7e-22
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-21
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	1e-21
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	2e-21
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	3e-21
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	3e-21
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	5e-21
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-21
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	5e-21
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	5e-21
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	6e-21
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	7e-21
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-20
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	1e-20
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	1e-20
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-20
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-20
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-20
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-20
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	3e-20
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	4e-20
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	4e-20
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	4e-20
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	6e-20
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	9e-20
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	1e-19
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	1e-19
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	2e-19
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	2e-19
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-19
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	4e-19
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	5e-19
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	6e-19
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	6e-19
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	7e-19
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	1e-18
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-18
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-18
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	3e-18
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	3e-18
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-18
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	3e-18
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-18
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	3e-18
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-17
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-17
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	2e-17
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	2e-17
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-17
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	3e-17
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	3e-17
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	4e-17
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-17
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-16
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-16
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	5e-16
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	6e-16
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	9e-16
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-15
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	1e-15
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-15
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	2e-15
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-15
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	3e-15
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-15
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	4e-15
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	6e-15
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	6e-15
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	8e-15
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-14
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	1e-14
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	2e-14
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-14
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	2e-14
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-14
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	3e-14
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	4e-14
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	5e-14
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	9e-14
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-13
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-13
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-13
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-13
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	2e-13
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	2e-13
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	2e-13
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	2e-13
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	2e-13
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-13
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	6e-13
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	7e-13
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	8e-13
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	1e-12
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-12
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	2e-12
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	4e-12
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-12
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	4e-12
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-12
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	7e-12
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-11
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	1e-11
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-11
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	1e-11
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	2e-11
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	2e-11
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	2e-11
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	2e-11
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-11
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-11
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-11
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	5e-11
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	6e-11
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	8e-11
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-11
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	1e-10
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	1e-10
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	2e-10
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-10
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-10
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-10
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	6e-10
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	7e-10
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-09
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-09
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-09
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	7e-09
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	8e-09
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	2e-08
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	2e-08
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	4e-08
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-08
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	7e-08
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	9e-08
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	1e-07
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	2e-07
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	2e-07
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-07
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	2e-07
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	2e-07
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	2e-07
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	5e-07
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	7e-07
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	9e-07
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-06
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	1e-06
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	2e-06
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	2e-06
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	3e-06
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	4e-06
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	4e-06
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	1e-05
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	1e-05
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	1e-05
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	1e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	1e-05
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	1e-05
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	1e-05
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-05
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	2e-05
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-05
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	2e-05
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	2e-05
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-05
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	3e-05
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	3e-05
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-05
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	5e-05
PRK07453	322	PRK07453, PRK07453, protochlorophyllide oxidoreduc	5e-05
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	6e-05
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	7e-05
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	1e-04
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	1e-04
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	4e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-04
cd05258	337	cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, e	0.002
cd01075	200	cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding d	0.002
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	0.002
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.002
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	0.002
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	0.004
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  214 bits (547), Expect = 9e-70
 Identities = 112/263 (42%), Positives = 152/263 (57%), Gaps = 46/263 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+VAIITGGASGIG + A+LF K+GA+VVIAD+ D+ GQA+A +LG  D+ ++HCDV
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADIDDDAGQAVAAELGDPDISFVHCDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV-----SILDTPKSDLERLLAVNTI 137
           + E +V   VDT VA+FG+LDI+ N+       G +     SIL+T   + ER+L VN  
Sbjct: 61  TVEADVRAAVDTAVARFGRLDIMFNNA------GVLGAPCYSILETSLEEFERVLDVNVY 114

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G FL  KHAARVM+P ++G I+               +  +  + Y  SK  +LGL +S 
Sbjct: 115 GAFLGTKHAARVMIPAKKGSIVSVASVAGV-------VGGLGPHAYTASKHAVLGLTRSA 167

Query: 198 AAELGRYGIRVDCVS----------HTYGL---AMAEAIAS-------------IANAAL 231
           A ELG +GIRV+CVS            +G+   A+ EA+               IA A L
Sbjct: 168 ATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVL 227

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +A DD   YV  QNL+V+GG 
Sbjct: 228 Y-LASDDSR-YVSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  193 bits (491), Expect = 5e-61
 Identities = 108/273 (39%), Positives = 149/273 (54%), Gaps = 45/273 (16%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQD 74
            +     RL G+VA++TGGA+GIG S  +LFHK+GAKV I D+QD+LGQ + D LG   +
Sbjct: 8   ASSLPSQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPN 67

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
           VC+ HCDV+ E +V   VD TV KFG LDI+VN+   L       I +   S+ E++  V
Sbjct: 68  VCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNA-GLTGPPCPDIRNVELSEFEKVFDV 126

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           N  G FL  KHAAR+M+P ++G I+      +     I GL   P  Y G SK  +LGL 
Sbjct: 127 NVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA----IGGLG--PHAYTG-SKHAVLGLT 179

Query: 195 KSLAAELGRYGIRVDCVSHTYGLAMAEAIA------------------------------ 224
           +S+AAELG++GIRV+CVS  Y +  A A+A                              
Sbjct: 180 RSVAAELGKHGIRVNCVS-PYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVEL 238

Query: 225 ---SIANAALYNMAKDDDTSYVGKQNLLVNGGF 254
               +ANA L+     D+  Y+   NL+++GGF
Sbjct: 239 TVDDVANAVLF--LASDEARYISGLNLMIDGGF 269

Length = 280

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  149 bits (379), Expect = 2e-44
 Identities = 85/259 (32%), Positives = 126/259 (48%), Gaps = 42/259 (16%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLGHQ--DVCYI 78
            +L G+VAI+TG + GIG + A+L  K GAKVVIA D+ +   Q L +++  +  D   +
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS+E +V NLV+  V KFGK+DILVN   N     F  + D    + +R++ VN  G
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVN---NAGISNFGLVTDMTDEEWDRVIDVNLTG 117

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTG---TTACTEIEGLCNIPANYYGVSKFGILGLVK 195
             L+ ++A   M+ R+ G I+  +        +C  +          Y  SK  +    K
Sbjct: 118 VMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVL----------YSASKGAVNAFTK 167

Query: 196 SLAAELGRYGIRVDCVS----HTYGL---------AMAEAIAS--------IANAALYNM 234
           +LA EL   GIRV+ V+     T             +AE I          IA   L+ +
Sbjct: 168 ALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLF-L 226

Query: 235 AKDDDTSYVGKQNLLVNGG 253
           A  DD SY+  Q + V+GG
Sbjct: 227 A-SDDASYITGQIITVDGG 244

Length = 247

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  148 bits (376), Expect = 4e-44
 Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 13/186 (6%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCDVSNERE 87
           A++TG +SGIG + A+   + GAKVV+AD  ++ L +  A +    +   +  DVS+E +
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEED 60

Query: 88  VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA 147
           V  LV+  + +FG+LDILVN   N        + +    D +R+L VN  G FL+ + A 
Sbjct: 61  VEALVEEALEEFGRLDILVN---NAGIARPGPLEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 148 RVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAELGRYGI 206
             M  +  G I+  +           GL  +P    Y  SK  + GL +SLA EL  YGI
Sbjct: 118 PHMKKQGGGRIVNISSVA--------GLRPLPGQAAYAASKAALEGLTRSLALELAPYGI 169

Query: 207 RVDCVS 212
           RV+ V+
Sbjct: 170 RVNAVA 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  144 bits (366), Expect = 2e-42
 Identities = 76/259 (29%), Positives = 120/259 (46%), Gaps = 39/259 (15%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHC 80
            RL+G+VAI+TG +SGIG   A+ F   GA+VV+ D  +   + +A ++        +  
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAA 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVS+E +V   V   + +FG +DILV N+G          +LD  +++ +R+ AVN    
Sbjct: 61  DVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNG---PLLDVDEAEFDRIFAVNVKSP 117

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           +L  + A   M     G I+    T       +     +    Y  SK  ++ L K+LAA
Sbjct: 118 YLWTQAAVPAMRGEGGGAIVNVASTAG-----LRPRPGLGW--YNASKGAVITLTKALAA 170

Query: 200 ELGRYGIRVDCVS----------HTYGLAMAEA----IASI-----------ANAALYNM 234
           ELG   IRV+ V+             G    E     +A+I           ANAAL+  
Sbjct: 171 ELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLA 230

Query: 235 AKDDDTSYVGKQNLLVNGG 253
           +  D+ S++    L+V+GG
Sbjct: 231 S--DEASWITGVTLVVDGG 247

Length = 251

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  138 bits (351), Expect = 3e-40
 Identities = 78/260 (30%), Positives = 110/260 (42%), Gaps = 47/260 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            LQG+ A++TG + GIG + A     +GAKVVI D  +   +ALA +L     +   +  
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVF 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVS+E  V  L++  V  FG LDILV N+G          +    + D +R++ VN  G 
Sbjct: 62  DVSDEAAVRALIEAAVEAFGALDILVNNAGIT----RDALLPRMSEEDWDRVIDVNLTGT 117

Query: 140 FLVAKHAARVMVPRRRGCILYTTG-----TGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           F V + A   M+  R G I+         TG        G  N     Y  +K G++G  
Sbjct: 118 FNVVRAALPPMIKARYGRIV-NISSVSGVTGNP------GQTN-----YSAAKAGVIGFT 165

Query: 195 KSLAAELGRYGIRVDCV------------SHTYGLAMAEAI---------ASIANAALYN 233
           K+LA EL   GI V+ V                  A                +ANA  + 
Sbjct: 166 KALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFL 225

Query: 234 MAKDDDTSYVGKQNLLVNGG 253
               D  SY+  Q + VNGG
Sbjct: 226 A--SDAASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  134 bits (339), Expect = 1e-38
 Identities = 74/264 (28%), Positives = 121/264 (45%), Gaps = 45/264 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-----QALADKLGHQDVCY 77
            L G+VA++TG +SGIG + A+   + GA+VV+A  +          A   + G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 78  IHCDVSNERE-VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DVS++ E V  LV     +FG++DILVN+           + +  + D +R++ VN 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDA--PLEELTEEDWDRVIDVNL 119

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVK 195
           +G FL+ + A  +M  +R   I+  +         + GL   P    Y  SK  ++GL K
Sbjct: 120 LGAFLLTRAALPLMKKQR---IVNISS--------VAGLGGPPGQAAYAASKAALIGLTK 168

Query: 196 SLAAELGRYGIRVDCVS------------HTYGLAMAEAIAS------------IANAAL 231
           +LA EL   GIRV+ V+             +  L   + +A+            +A A  
Sbjct: 169 ALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA 228

Query: 232 YNMAKDDDTSYVGKQNLLVNGGFR 255
           + +A D+  SY+  Q L V+GG  
Sbjct: 229 F-LASDEAASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  131 bits (332), Expect = 1e-37
 Identities = 75/197 (38%), Positives = 100/197 (50%), Gaps = 25/197 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G+VAI+TGGA G+G + A+L    GAKVV++D+ D  GQA A +LG     + H DV
Sbjct: 2   RLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAELGDA-ARFFHLDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-----GCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           ++E     +VDT    FG+LD+LVN+     G  +E         T   +  RLL +N  
Sbjct: 61  TDEDGWTAVVDTAREAFGRLDVLVNNAGILTGGTVE--------TTTLEEWRRLLDINLT 112

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKS 196
           G FL  +     M     G I+          + IEGL   PA   Y  SK  + GL KS
Sbjct: 113 GVFLGTRAVIPPMKEAGGGSIINM--------SSIEGLVGDPALAAYNASKGAVRGLTKS 164

Query: 197 LAAELG--RYGIRVDCV 211
            A E     YGIRV+ V
Sbjct: 165 AALECATQGYGIRVNSV 181

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  127 bits (322), Expect = 7e-36
 Identities = 73/258 (28%), Positives = 110/258 (42%), Gaps = 37/258 (14%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIH 79
             L+GRVA++TG A GIG + A     +GA+V++ D+  +   A A+ +           
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV +   +   V   V  FG+LDILV    N          +      ER++ VN  G 
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILV---ANAGIFPLTPFAEMDDEQWERVIDVNLTGT 118

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           FL+ + A   ++    G I+  T +         GL +     Y  SK G++G  ++LA 
Sbjct: 119 FLLTQAALPALIRAGGGRIV-LTSSVAGPRVGYPGLAH-----YAASKAGLVGFTRALAL 172

Query: 200 ELGRYGIRVDCVSHTYGLA-----------MAEAIAS------------IANAALYNMAK 236
           EL    I V+ V H  G+             AEAIA+            IA A L+  + 
Sbjct: 173 ELAARNITVNSV-HPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLAS- 230

Query: 237 DDDTSYVGKQNLLVNGGF 254
            D+  Y+  Q L V+GG 
Sbjct: 231 -DEARYITGQTLPVDGGA 247

Length = 251

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 1e-35
 Identities = 77/258 (29%), Positives = 123/258 (47%), Gaps = 41/258 (15%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
           + L G+VA++TGGASGIG + A+LF   GA+V + D  +++ +  A +L   +   + CD
Sbjct: 11  FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCD 69

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSI---LDTPKSDLERLLAVNTIG 138
           VS+ + V   V   ++ FG++DILVNS       G   +    D  + D ++ + +N  G
Sbjct: 70  VSDSQSVEAAVAAVISAFGRIDILVNSA------GVALLAPAEDVSEEDWDKTIDINLKG 123

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL+A+   R M+    G I+               L    A  Y  SK G++G+ K LA
Sbjct: 124 SFLMAQAVGRHMIAAGGGKIVNLASQAGVV-----ALERHVA--YCASKAGVVGMTKVLA 176

Query: 199 AELGRYGIRVDCVSHTY--------------GLAMAEAI--------ASIANAALYNMAK 236
            E G YGI V+ +S T               G    + I          IA AAL+  + 
Sbjct: 177 LEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLAS- 235

Query: 237 DDDTSYVGKQNLLVNGGF 254
            D  + +  +NL+++GG+
Sbjct: 236 -DAAAMITGENLVIDGGY 252

Length = 255

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  124 bits (313), Expect = 1e-34
 Identities = 76/256 (29%), Positives = 114/256 (44%), Gaps = 36/256 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIH 79
            L+G+VA++TG + GIG + A+     GA VVI     +   +AL  ++G        + 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DVS+   V   VD   A+FG +DILVN+            +   + D +R++  N  G 
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLL---MRMKEEDWDRVIDTNLTGV 118

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F + K  AR M+ +R G I+    +         G  N     Y  SK G++G  KSLA 
Sbjct: 119 FNLTKAVARPMMKQRSGRII--NISSVVGLMGNPGQAN-----YAASKAGVIGFTKSLAR 171

Query: 200 ELGRYGIRVDCVSHTY-GLAM--------AEAIAS------------IANAALYNMAKDD 238
           EL   GI V+ V+  +    M         EAI +            IA+A  +  +  D
Sbjct: 172 ELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFLAS--D 229

Query: 239 DTSYVGKQNLLVNGGF 254
           + +Y+  Q L VNGG 
Sbjct: 230 EAAYITGQTLHVNGGM 245

Length = 248

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  130 bits (329), Expect = 2e-34
 Identities = 79/245 (32%), Positives = 115/245 (46%), Gaps = 43/245 (17%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY-IHCDV 82
           L G+VA++TG A GIG + A+     GA VV+AD+ +   +A A +LG  D    + CDV
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDV 479

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRG-FVS--ILDTPKSDLERLLAVNTIGG 139
           ++E  V    +     FG +DI+V++       G  +S  I +T   D  R   VN  G 
Sbjct: 480 TDEAAVQAAFEEAALAFGGVDIVVSNA------GIAISGPIEETSDEDWRRSFDVNATGH 533

Query: 140 FLVAKHAARVMVPRRR---GCILYTT-------GTGTTACTEIEGLCNIPANYYGVSKFG 189
           FLVA+ A R+M  + +   G I++         G    A              YG +K  
Sbjct: 534 FLVAREAVRIM--KAQGLGGSIVFIASKNAVNPGPNFGA--------------YGAAKAA 577

Query: 190 ILGLVKSLAAELGRYGIRV-----DCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVG 244
            L LV+ LA ELG  GIRV     D V    G+   E I   A AA Y +++++   +  
Sbjct: 578 ELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIE--ARAAAYGLSEEELEEFYR 635

Query: 245 KQNLL 249
            +NLL
Sbjct: 636 ARNLL 640

Length = 681

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  120 bits (304), Expect = 2e-33
 Identities = 79/256 (30%), Positives = 125/256 (48%), Gaps = 37/256 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G+VAI+TG  SG G   A+ F + GA+VVIAD+  +  + +A  +G   +  I  DV
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADINADGAERVAADIGEAAI-AIQADV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   +V  +V+  ++KFG+LDILVN+   + +R    +L+  + + +R+ AVN    +L 
Sbjct: 61  TKRADVEAMVEAALSKFGRLDILVNNA-GITHRN-KPMLEVDEEEFDRVFAVNVKSIYLS 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           A+     M  +  G I+    T         GL      +Y  SK  ++   K++A EL 
Sbjct: 119 AQALVPHMEEQGGGVIINIASTA--GLRPRPGL-----TWYNASKGWVVTATKAMAVELA 171

Query: 203 RYGIRVDCV----SHTYGLAM----------AEAIASI-----------ANAALYNMAKD 237
              IRV+C+      T  L+M          A+  A+I           ANAALY     
Sbjct: 172 PRNIRVNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALY--LAS 229

Query: 238 DDTSYVGKQNLLVNGG 253
           D+ S++    L V+GG
Sbjct: 230 DEASFITGVALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  120 bits (304), Expect = 3e-33
 Identities = 78/260 (30%), Positives = 114/260 (43%), Gaps = 46/260 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL GRVA+ITGG SGIG + A+     GA VV+ D+    G+A AD++G     ++  DV
Sbjct: 4   RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++E  V  L DT    +G +DI   N+G +       SIL+T     +R+  VN    +L
Sbjct: 61  TDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDD--SILNTGLDAWQRVQDVNLTSVYL 118

Query: 142 VAKHAARVMVPRRRGCILYTT---GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
             K A   MV + +G I+ T        +A ++I          Y  SK G+L + + L 
Sbjct: 119 CCKAALPHMVRQGKGSIINTASFVAVMGSATSQIS---------YTASKGGVLAMSRELG 169

Query: 199 AELGRYGIRVDCVS-------------------------HTYGLAMAEAIASIANAALYN 233
            +  R GIRV+ +                          H      AE    IA A  + 
Sbjct: 170 VQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEP-EEIAAAVAF- 227

Query: 234 MAKDDDTSYVGKQNLLVNGG 253
               DD S++     LV+GG
Sbjct: 228 -LASDDASFITASTFLVDGG 246

Length = 255

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  120 bits (303), Expect = 5e-33
 Identities = 62/192 (32%), Positives = 92/192 (47%), Gaps = 14/192 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            L+G+VA++TG ASGIG   A    K GAKVVIAD+ D    A A+ L         +  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV++E  +   +D  V  FG +DILVN   N   +    I D P    ++++A+   G F
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVN---NAGIQHVAPIEDFPTEKWKKMIAIMLDGAF 117

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAA 199
           L  K A  +M  +  G I+            + GL        Y  +K G++GL K +A 
Sbjct: 118 LTTKAALPIMKAQGGGRIINM--------ASVHGLVGSAGKAAYVSAKHGLIGLTKVVAL 169

Query: 200 ELGRYGIRVDCV 211
           E   +G+ V+ +
Sbjct: 170 EGATHGVTVNAI 181

Length = 258

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  119 bits (300), Expect = 9e-33
 Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 45/255 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSN 84
           +VA++TG + GIG + A      GAKV + D  +       +++     +   +  DVS+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNTIGGFL 141
              V  LV+   A+FG +DILVN+       G      ++   + D + ++ VN  G F 
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNA------GITRDNLLMRMSEEDWDAVINVNLTGVFN 114

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAA 199
           V +   R M+ RR G I+          + + GL   P  AN Y  SK G++G  KSLA 
Sbjct: 115 VTQAVIRAMIKRRSGRII--------NISSVVGLIGNPGQAN-YAASKAGVIGFTKSLAK 165

Query: 200 ELGRYGIRVDCVSHTY-GLAMAEAI--------------------ASIANAALYNMAKDD 238
           EL   GI V+ V+  +    M +A+                      +ANA  +     D
Sbjct: 166 ELASRGITVNAVAPGFIDTDMTDALPEKVKEKILKQIPLGRLGTPEEVANAVAFLA--SD 223

Query: 239 DTSYVGKQNLLVNGG 253
           D SY+  Q L VNGG
Sbjct: 224 DASYITGQVLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  118 bits (299), Expect = 2e-32
 Identities = 63/190 (33%), Positives = 94/190 (49%), Gaps = 13/190 (6%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L G+VAI+TGGA+ IGA+ A+     GA+V I D+  + G A+A  LG     +I  D+
Sbjct: 3   GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGE-RARFIATDI 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +++  +   V T VA+FG++DILVN  C     G      + ++D    L VN +   ++
Sbjct: 62  TDDAAIERAVATVVARFGRVDILVNLACTYLDDGL----ASSRADWLAALDVNLVSAAML 117

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           A+ A   +  R  G I+  T            L       Y  SK  I  L +S+A +L 
Sbjct: 118 AQAAHPHLA-RGGGAIVNFTSISAKFAQTGRWL-------YPASKAAIRQLTRSMAMDLA 169

Query: 203 RYGIRVDCVS 212
             GIRV+ VS
Sbjct: 170 PDGIRVNSVS 179

Length = 261

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  117 bits (294), Expect = 7e-32
 Identities = 65/207 (31%), Positives = 103/207 (49%), Gaps = 17/207 (8%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNL--GQALADKLGHQDVCYIHC 80
           L+G+VA++TG + GIG   A    + GA +VI    ++     Q L +K G  +     C
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEG-VEATAFTC 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVS+E  +   V+     FGK+DILVN +G            + P+++   ++ VN  G 
Sbjct: 62  DVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRR----HPAEEFPEAEWRDVIDVNLNGV 117

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F V++  AR M+ +  G I+        +     G   +PA  Y  SK G+ GL K+LA 
Sbjct: 118 FFVSQAVARHMIKQGHGKII-----NICSLLSELGGPPVPA--YAASKGGVAGLTKALAT 170

Query: 200 ELGRYGIRVDCVSHTY-GLAMAEAIAS 225
           E  R+GI+V+ ++  Y    M EA+ +
Sbjct: 171 EWARHGIQVNAIAPGYFATEMTEAVVA 197

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  115 bits (290), Expect = 4e-31
 Identities = 65/189 (34%), Positives = 93/189 (49%), Gaps = 10/189 (5%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G   ++TGGASGIG + A+ F + GA+V + DV +    A A +L    V     DV+
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVA 68

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  +V  + DT V +FG LD+LVN+       G   I +      E+ LAVN  G F  A
Sbjct: 69  DPAQVERVFDTAVERFGGLDVLVNNAGIAGPTG--GIDEITPEQWEQTLAVNLNGQFYFA 126

Query: 144 KHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           + A  ++     G  I+  +           G        Y  SK+ ++GLVKSLA ELG
Sbjct: 127 RAAVPLLKASGHGGVIIALSSVAGR--LGYPGRTP-----YAASKWAVVGLVKSLAIELG 179

Query: 203 RYGIRVDCV 211
             GIRV+ +
Sbjct: 180 PLGIRVNAI 188

Length = 264

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  113 bits (284), Expect = 3e-30
 Identities = 63/201 (31%), Positives = 96/201 (47%), Gaps = 19/201 (9%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI----ADVQDNLGQALADKLGHQDVCY 77
           + L+G+VAI+TGG+ GIG + A+   + GA V I    A   +   + LA K G +    
Sbjct: 4   FSLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVK-TKA 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
             CDVS++  V          FGK+DIL+ N+G  +        LD       +++ VN 
Sbjct: 63  YKCDVSSQESVEKTFKQIQKDFGKIDILIANAGITVH----KPALDYTYEQWNKVIDVNL 118

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN--YYGVSKFGILGLV 194
            G F  A+ AA++   + +G ++ T     T       + N P     Y  SK  ++ L 
Sbjct: 119 NGVFNCAQAAAKIFKKQGKGSLIITASMSGT-------IVNRPQPQAAYNASKAAVIHLA 171

Query: 195 KSLAAELGRYGIRVDCVSHTY 215
           KSLA E  +Y IRV+ +S  Y
Sbjct: 172 KSLAVEWAKYFIRVNSISPGY 192

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 4e-30
 Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 18/199 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ----DVCYI 78
           RL G+VA++TG A GIGA+ A+ F + GA V +AD+   L +  A  +        V  +
Sbjct: 4   RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAV 63

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
             DV++   V   V      FG LD+LVN +G N+    F   L     D  R  AV+  
Sbjct: 64  PADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINV----FADPLAMTDEDWRRCFAVDLD 119

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKS 196
           G +   +     MV R RG I+      +T   +I     IP  + Y V+K G+LGL ++
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIV---NIASTHAFKI-----IPGCFPYPVAKHGLLGLTRA 171

Query: 197 LAAELGRYGIRVDCVSHTY 215
           L  E     +RV+ ++  Y
Sbjct: 172 LGIEYAARNVRVNAIAPGY 190

Length = 260

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  117 bits (294), Expect = 4e-30
 Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 10/192 (5%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN 84
           Q RV ++TG A GIG +A Q F + G +VV+AD      +  AD LG         DVS+
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALA-MDVSD 62

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
           E ++    +    +FG++D+LVN+   +      + LDT   +  RL A+N  G +LVA+
Sbjct: 63  EAQIREGFEQLHREFGRIDVLVNNA-GVTDPTMTATLDTTLEEFARLQAINLTGAYLVAR 121

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAELGR 203
            A R+M+ +  G  +    +G        GL  +P    Y  SK  ++ L +SLA E   
Sbjct: 122 EALRLMIEQGHGAAIVNVASGA-------GLVALPKRTAYSASKAAVISLTRSLACEWAA 174

Query: 204 YGIRVDCVSHTY 215
            GIRV+ V   Y
Sbjct: 175 KGIRVNAVLPGY 186

Length = 520

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 5e-30
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 37/257 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
           RL G+VAIITG +SGIG +AA+LF + GAKVV+   +      L  ++  +  +   +  
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV +E     LV   V +FG LDI  N+   L   G   + +         LA N    F
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMG--PVAEMSLEGWRETLATNLTSAF 120

Query: 141 LVAKHAARVMVPRRRGCILYT-TGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           L AKH    M+ R  G +++T T  G TA     G   + A  Y  SK G++GL + LAA
Sbjct: 121 LGAKHQIPAMLARGGGSLIFTSTFVGHTA-----GFPGMAA--YAASKAGLIGLTQVLAA 173

Query: 200 ELGRYGIRVDC-----VSHTYGLAM---AEAIA---------------SIANAALYNMAK 236
           E G  GIRV+           G AM    EA+A                IA AAL+  + 
Sbjct: 174 EYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLAS- 232

Query: 237 DDDTSYVGKQNLLVNGG 253
            D  S+V    LLV+GG
Sbjct: 233 -DAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 6e-30
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 19/190 (10%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ----DVCYIHCD 81
            +VA++ GG   +GA       + G +V +AD+       +A ++  +           D
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
            ++E+ V+ L       FG++D+LV N+G          I D    D +R L VN +G F
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAF----ITDFQLGDFDRSLQVNLVGYF 117

Query: 141 LVAKHAARVMVPRR-RGCIL-YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
           L A+  +R+M+    +G I+   + +G        G        Y  +KFG +GL +SLA
Sbjct: 118 LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSG--------YSAAKFGGVGLTQSLA 169

Query: 199 AELGRYGIRV 208
            +L  YGI V
Sbjct: 170 LDLAEYGITV 179

Length = 259

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  111 bits (280), Expect = 8e-30
 Identities = 70/255 (27%), Positives = 114/255 (44%), Gaps = 48/255 (18%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIH--CDVSNE 85
           A++TG + GIG + A    K GAKV+I     +   + + ++L    V  +   CDVS+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 86  REVINLVDTTVAKFGKLDILVNSGC----NLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            +V  +V+    + G +DILVN+      NL       ++   + D + ++  N  G F 
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGITRDNL-------LMRMKEEDWDAVIDTNLTGVFN 113

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAA 199
           + +   R+M+ +R G I+          + + GL      AN Y  SK G++G  KSLA 
Sbjct: 114 LTQAVLRIMIKQRSGRIINI--------SSVVGLMGNAGQAN-YAASKAGVIGFTKSLAK 164

Query: 200 ELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIANAALYNMAKDD 238
           EL    I V+ V+        T  L       +   I          +ANA  + +A  D
Sbjct: 165 ELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAF-LAS-D 222

Query: 239 DTSYVGKQNLLVNGG 253
           + SY+  Q + V+GG
Sbjct: 223 EASYITGQVIHVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 1e-29
 Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 16/203 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
           R   +VAI+TG A GIG + A+   + GA VV+AD+     + +A ++   G   +  + 
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAI-AVQ 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DVS+      + D TV+ FG +D LVN+           ++  P    ++ ++VN  G 
Sbjct: 62  VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGA 121

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
            +  +   + M  R  G I+  + T             + +N+YG++K G+ GL + LA 
Sbjct: 122 LVCTRAVYKHMAKRGGGAIVNQSSTAAW----------LYSNFYGLAKVGLNGLTQQLAR 171

Query: 200 ELGRYGIRVDCVSHTYGLAMAEA 222
           ELG   IRV+ ++   G    EA
Sbjct: 172 ELGGMNIRVNAIAP--GPIDTEA 192

Length = 250

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  111 bits (279), Expect = 1e-29
 Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 14/189 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RLQG+VA++TG ASGIG + A+ +   GA+VVIAD++    +  A ++G      +  DV
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPA-AIAVSLDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + +  +  +V   V +FG +DIL N+    +      ILD  +   +RL AVN  G F +
Sbjct: 62  TRQDSIDRIVAAAVERFGGIDILFNNAALFDMA---PILDISRDSYDRLFAVNVKGLFFL 118

Query: 143 AKHAARVMVPRRRG--CILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            +  AR MV + RG   I   +  G       E L     ++Y  +K  ++   +S A  
Sbjct: 119 MQAVARHMVEQGRGGKIINMASQAGRRG----EAL----VSHYCATKAAVISYTQSAALA 170

Query: 201 LGRYGIRVD 209
           L R+GI V+
Sbjct: 171 LIRHGINVN 179

Length = 257

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  110 bits (278), Expect = 1e-29
 Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 15/227 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-GHQDVCYIHCDVSN 84
           G+VA++TGGASGIG + A+     GA VV+AD+   + + +A+   G      + CDV++
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQCDVTS 60

Query: 85  EREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           E +V +  +  V +FG LDI+V N+G          I +T   D  R + +N  G FLV+
Sbjct: 61  EAQVQSAFEQAVLEFGGLDIVVSNAGIATSSP----IAETSLEDWNRSMDINLTGHFLVS 116

Query: 144 KHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           + A R+M  +   G I++       A           A  Y  +K     L + LA E G
Sbjct: 117 REAFRIMKSQGIGGNIVFNASKNAVA-------PGPNAAAYSAAKAAEAHLARCLALEGG 169

Query: 203 RYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLL 249
             GIRV+ V +   +     I      A    A          +NLL
Sbjct: 170 EDGIRVNTV-NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLL 215

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 2e-29
 Identities = 70/256 (27%), Positives = 106/256 (41%), Gaps = 38/256 (14%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHC 80
           L G+ A++TG A G+GA+ A+   + GA V   D      + LA  L   G +    I  
Sbjct: 5   LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGR-AHAIAA 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+++   V    D   A  G LD LVN+      +   S  +      + ++ VN  G F
Sbjct: 64  DLADPASVQRFFDAAAAALGGLDGLVNNAGITNSK---SATELDIDTWDAVMNVNVRGTF 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           L+ + A   +    RG I+      +   T + G   + A  Y  SK  ++G+ +SLA E
Sbjct: 121 LMLRAALPHLRDSGRGRIV---NLASD--TALWGAPKLGA--YVASKGAVIGMTRSLARE 173

Query: 201 LGRYGIRVDCVS-------HTYGLAMAEAIAS---------------IANAALYNMAKDD 238
           LG  GI V+ ++        T  +   E  A                +A A L+     D
Sbjct: 174 LGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLF--LLSD 231

Query: 239 DTSYVGKQNLLVNGGF 254
              +V  Q L VNGGF
Sbjct: 232 AARFVTGQLLPVNGGF 247

Length = 250

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  110 bits (276), Expect = 2e-29
 Identities = 64/193 (33%), Positives = 102/193 (52%), Gaps = 20/193 (10%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L+G+VAI+TG  +GIGA+ A    + GA+VV+AD+     QA+  ++    +  +  DV+
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADIDGGAAQAVVAQIAGGALA-LRVDVT 59

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS----ILDTPKSDLERLLAVNTIGG 139
           +E++V  L +  V +FG LD+LVN+       G +     I+DT  +  ++ +A+N  G 
Sbjct: 60  DEQQVAALFERAVEEFGGLDLLVNNA------GAMHLTPAIIDTDLAVWDQTMAINLRGT 113

Query: 140 FLVAKHAARVMVPRRRGCILYT-TGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
           FL  +HAA  M+ R  G I+   +  G +               YG SK  I  L ++LA
Sbjct: 114 FLCCRHAAPRMIARGGGSIVNLSSIAGQSGDPGYGA--------YGASKAAIRNLTRTLA 165

Query: 199 AELGRYGIRVDCV 211
           AEL   GIR + +
Sbjct: 166 AELRHAGIRCNAL 178

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 3e-29
 Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 30/201 (14%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
             +  LQG++ I+TGG+SGIG +  +    NGA VV AD+             H++  ++
Sbjct: 2   QDWLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGG-------DGQHENYQFV 54

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPK----------SD 127
             DVS+  EV + V   + KFG++D LVN +G N+       +L   K          + 
Sbjct: 55  PTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIP-----RLLVDEKDPAGKYELNEAA 109

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK 187
            +++  +N  G FL+++  AR MV +  G I+  +       +E +         Y  +K
Sbjct: 110 FDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSC-------YAATK 162

Query: 188 FGILGLVKSLAAELGRYGIRV 208
             +    +S A ELG++ IRV
Sbjct: 163 AALNSFTRSWAKELGKHNIRV 183

Length = 266

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  109 bits (273), Expect = 8e-29
 Identities = 59/197 (29%), Positives = 95/197 (48%), Gaps = 24/197 (12%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYI 78
           L+G+VA++TG +SGIG + A      GA VV+      D  + + + +    G + +   
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAV-GGKAIAV- 58

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS E +V+ L  + + +FG LDILVN   N   +G  S  +    D  +++ VN  G
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVN---NAGLQGDASSHEMTLEDWNKVIDVNLTG 115

Query: 139 GFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLCNIP-ANY--YGVSKFGILGLV 194
            FL A+ A +     + +G I+       ++  E      IP   +  Y  SK G+  + 
Sbjct: 116 QFLCAREAIKRFRKSKIKGKIIN-----MSSVHEK-----IPWPGHVNYAASKGGVKMMT 165

Query: 195 KSLAAELGRYGIRVDCV 211
           K+LA E    GIRV+ +
Sbjct: 166 KTLAQEYAPKGIRVNAI 182

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  108 bits (273), Expect = 1e-28
 Identities = 64/192 (33%), Positives = 94/192 (48%), Gaps = 18/192 (9%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
           G VA++TGGASG+G +  +     GAKVVI D+ ++ G+ +A KLG     ++  DV++E
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDLPNSPGETVA-KLGDN-CRFVPVDVTSE 59

Query: 86  REVINLVDTTVAKFGKLDILVNS---GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++V   +    AKFG+LDI+VN        +               +R++ VN IG F V
Sbjct: 60  KDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTFNV 119

Query: 143 AKHAARVMVPR------RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
            + AA  M          RG I+      T +    EG   I    Y  SK GI+G+   
Sbjct: 120 IRLAAGAMGKNEPDQGGERGVII-----NTASVAAFEG--QIGQAAYSASKGGIVGMTLP 172

Query: 197 LAAELGRYGIRV 208
           +A +L   GIRV
Sbjct: 173 IARDLAPQGIRV 184

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  108 bits (271), Expect = 2e-28
 Identities = 79/276 (28%), Positives = 115/276 (41%), Gaps = 76/276 (27%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALAD--KLGHQDVCYIHC 80
           L+G+VA ITGG +GIG + A+ F + GA V IA    + L  A  +           I C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGC--------NLEYRGFVSILDTPKSDLERLL 132
           DV +   V   VD T+ +FGK+DIL+N+          +L   GF +++D          
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVIDI--------- 111

Query: 133 AVNTIGGFLVAKHAA-RVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY-------- 183
             +  G F   K    R++  +  G IL                 NI A Y         
Sbjct: 112 --DLNGTFNTTKAVGKRLIEAKHGGSIL-----------------NISATYAYTGSPFQV 152

Query: 184 --GVSKFGILGLVKSLAAELGRYGIRVDCVS-----HTYGL-----------AMAEAI-- 223
               +K G+  L +SLA E G YGIRV+ ++      T G+            M E +  
Sbjct: 153 HSAAAKAGVDALTRSLAVEWGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPL 212

Query: 224 ------ASIANAALYNMAKDDDTSYVGKQNLLVNGG 253
                   IAN AL+ ++  D  SY+    L+V+GG
Sbjct: 213 GRLGTPEEIANLALFLLS--DAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  105 bits (265), Expect = 1e-27
 Identities = 54/187 (28%), Positives = 86/187 (45%), Gaps = 12/187 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH---CDV 82
            +VAIITG A GIG + A+    +G  +V+AD+          +   +          DV
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +++ +V  L+D  V KFG  D++VN   N        +L   + DL+++ AVN  G    
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVN---NAGIAPITPLLTITEEDLKKVYAVNVFGVLFG 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            + AAR       G  +       ++   ++G  N+ A  Y  SKF + GL ++ A EL 
Sbjct: 119 IQAAARQFKKLGHGGKI----INASSIAGVQGFPNLGA--YSASKFAVRGLTQTAAQELA 172

Query: 203 RYGIRVD 209
             GI V+
Sbjct: 173 PKGITVN 179

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  105 bits (263), Expect = 2e-27
 Identities = 64/194 (32%), Positives = 96/194 (49%), Gaps = 19/194 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH-CD 81
           RL GRVAI+TG  SGIG + A+LF + GA+VV+AD      + +A  +      +    D
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNTIG 138
           V +   V  LVD   A++G+LD+LVN+       GF     ++ T ++D + ++ VN  G
Sbjct: 62  VGSAEAVEALVDFVAARWGRLDVLVNNA------GFGCGGTVVTTDEADWDAVMRVNVGG 115

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSL 197
            FL AK+A  +M  +  G I+ T      A               Y  SK  I  L +++
Sbjct: 116 VFLWAKYAIPIMQRQGGGSIVNTASQLALA--------GGRGRAAYVASKGAIASLTRAM 167

Query: 198 AAELGRYGIRVDCV 211
           A +    GIRV+ V
Sbjct: 168 ALDHATDGIRVNAV 181

Length = 252

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  104 bits (262), Expect = 4e-27
 Identities = 65/257 (25%), Positives = 106/257 (41%), Gaps = 40/257 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLG--HQDVCYIH 79
            L GRVA++TG A G+G + A    + GA VV+     +   + L + +    +    + 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV+++  +   V   V +FG++DILVN+    E +      D    + + ++ VN  G 
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKPLA---DMSDDEWDEVIDVNLSGV 119

Query: 140 FLVAKHAARVMVPRRRGCI-LYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
           F + +     M  +R G I   ++  G               + Y  +K G++GL K+LA
Sbjct: 120 FHLLRAVVPPMRKQRGGRIVNISSVAGLPG--------WPGRSNYAAAKAGLVGLTKALA 171

Query: 199 AELGRYGIRVDCVSHTYGL--AMAEAIAS--------------------IANAALYNMAK 236
            EL  YGI V+ V     +   M EA                       IA A  +    
Sbjct: 172 RELAEYGITVNMV-APGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFLC-- 228

Query: 237 DDDTSYVGKQNLLVNGG 253
            D + Y+  Q + V GG
Sbjct: 229 SDASDYITGQVIEVTGG 245

Length = 249

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 5e-27
 Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 18/193 (9%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCDVSN 84
           +VAIITGGASGIG + A+L  K GAKV I D  +N G    L          ++ CDV++
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTS 60

Query: 85  EREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG---GF 140
             ++       + KFG++DIL+ N+G   E               E+ + VN  G     
Sbjct: 61  WEQLAAAFKKAIEKFGRVDILINNAGILDEKSYL--FAGKLPPPWEKTIDVNLTGVINTT 118

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAA 199
            +A H        + G I+              GL   P    Y  SK G++G  +SLA 
Sbjct: 119 YLALHYMDKNKGGKGGVIVNIGSVA--------GLYPAPQFPVYSASKHGVVGFTRSLAD 170

Query: 200 EL-GRYGIRVDCV 211
            L  + G+RV+ +
Sbjct: 171 LLEYKTGVRVNAI 183

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  104 bits (261), Expect = 5e-27
 Identities = 72/267 (26%), Positives = 112/267 (41%), Gaps = 59/267 (22%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALADKL 70
           L G+VA++TG + GIG + A+   ++GA VV+             A+++   G+A+A   
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIA--- 57

Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLER 130
                  +  DVS+  +V  L D     FG +DILVN+   +       I +T + + +R
Sbjct: 58  -------VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVML---KKPIAETSEEEFDR 107

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKF 188
           +  VNT G F V + AA+ +   R G  +    +  TA          P NY  Y  SK 
Sbjct: 108 MFTVNTKGAFFVLQEAAKRL---RDGGRIINISSSLTAAY-------TP-NYGAYAGSKA 156

Query: 189 GILGLVKSLAAELGRYGIRVDCVS-------HTYGLAMAEAIASIANAALYN---MAKD- 237
            +    + LA ELG  GI V+ V+         Y     EA+   A  +        +D 
Sbjct: 157 AVEAFTRVLAKELGGRGITVNAVAPGPVDTDMFYAGKTEEAVEGYAKMSPLGRLGEPEDI 216

Query: 238 ---------DDTSYVGKQNLLVNGGFR 255
                     D  +V  Q +  NGG+ 
Sbjct: 217 APVVAFLASPDGRWVNGQVIRANGGYV 243

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 1e-26
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 31/209 (14%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALA--DKLGHQ 73
           T+   + L G+ A++TGG+ G+G   A+   + GA+VV+ A   + L +A A  + LG  
Sbjct: 3   TVLELFDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALG-I 61

Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-----GCNLEYRGFVSILDTPKSDL 128
           D  +I  DV++E ++  L + T+ +FG +DILVN+     G   E        D P    
Sbjct: 62  DALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAPAE--------DHPVEAW 113

Query: 129 ERLLAVNTIGGFLVAKHAARV-MVPRRRGCILYTTGTGTTACTEIEGLCNIPANY----- 182
           ++++ +N  G FL+++  A+  M+PR  G I+            + GL   P        
Sbjct: 114 DKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINV--------ASVAGLGGNPPEVMDTIA 165

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           Y  SK  ++   ++LAAE G +GIRV+ +
Sbjct: 166 YNTSKGAVINFTRALAAEWGPHGIRVNAI 194

Length = 259

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  102 bits (256), Expect = 2e-26
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 13/187 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
           G+VAI+TGG  GIG      F + G KVV AD+ +  G   A+  G  ++ ++H DV++E
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEERGADFAEAEG-PNLFFVHGDVADE 59

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
             V  +V   + K G++D+LVN+           +      + +R+L+VN  G + ++++
Sbjct: 60  TLVKFVVYAMLEKLGRIDVLVNNAARGSKG---ILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
               ++ + +G I+      +T   + E      +  Y  SK G++ L  +LA  LG   
Sbjct: 117 CRDELI-KNKGRII---NIASTRAFQSEP----DSEAYAASKGGLVALTHALAMSLGPD- 167

Query: 206 IRVDCVS 212
           IRV+C+S
Sbjct: 168 IRVNCIS 174

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 2e-26
 Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 21/213 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
           +L G+ A+ITG   GIG   A++F ++GA +++ D+   + + LAD+L   GH+    + 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVV- 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSG--CNLEYRGFVSILDTPKSDLERLLAVNTI 137
            DV +   V   +     K G++DILVN+   C L      S LD    D +  + +N  
Sbjct: 61  ADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLG-----SFLDMSDEDRDFHIDINIK 115

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
           G + V K     M+ R+ G I+  +  TG       E         Y ++K  I+GL KS
Sbjct: 116 GVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGE-------TAYALTKAAIVGLTKS 168

Query: 197 LAAELGRYGIRVDCVSHTYGLA-MAEAIASIAN 228
           LA E  + GIRV+ +   Y    MAE+IA  +N
Sbjct: 169 LAVEYAQSGIRVNAICPGYVRTPMAESIARQSN 201

Length = 263

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  102 bits (256), Expect = 3e-26
 Identities = 64/197 (32%), Positives = 87/197 (44%), Gaps = 26/197 (13%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGH-----QDVCYIH 79
           G+  +ITGG+SGIG + A+   K GA V+I A  +  L +A+ +         Q V YI 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNT 136
            D+S+  EV       V K G  D++VN        G        D    + ER + VN 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCA------GISIPGLFEDLTAEEFERGMDVNY 114

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILGLV 194
            G   VA     +M  +R G I++     + A      L  I   Y  Y  SKF + GL 
Sbjct: 115 FGSLNVAHAVLPLMKEQRPGHIVF---VSSQA-----ALVGI-YGYSAYCPSKFALRGLA 165

Query: 195 KSLAAELGRYGIRVDCV 211
           +SL  EL  Y IRV  V
Sbjct: 166 ESLRQELKPYNIRVSVV 182

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  102 bits (256), Expect = 3e-26
 Identities = 57/192 (29%), Positives = 90/192 (46%), Gaps = 14/192 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+G+VA+ITG +SGIG + A+   + GAKVV+A  ++   +ALAD++G      +  DV
Sbjct: 3   TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDV 62

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++   V   ++    +FG++DILVN+ G      G   + +    D +R++  N  G   
Sbjct: 63  TDRAAVEAAIEALPEEFGRIDILVNNAGL---ALG-DPLDEADLDDWDRMIDTNVKGLLN 118

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAE 200
             +     MV R+ G I+              G    P    YG +K  +      L  E
Sbjct: 119 GTRAVLPGMVERKSGHIINLGSIA--------GRYPYPGGAVYGATKAAVRAFSLGLRQE 170

Query: 201 LGRYGIRVDCVS 212
           L   GIRV  +S
Sbjct: 171 LAGTGIRVTVIS 182

Length = 246

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  102 bits (257), Expect = 3e-26
 Identities = 60/201 (29%), Positives = 86/201 (42%), Gaps = 36/201 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+G+V  ITGGA GIG + A+     GA+V I D+ + L +  A +LG      +  DV
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPL--DV 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTIGG 139
           ++       +D   A  G +D+LVN+       G +     LD P +   R+L VN  G 
Sbjct: 60  TDPASFAAFLDAVEADLGPIDVLVNNA------GVMPVGPFLDEPDAVTRRILDVNVYGV 113

Query: 140 FLVAKHAARVMVPRRRGCI---------LYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
            L +K AA  MVPR RG +         +   G  T                Y  SK  +
Sbjct: 114 ILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMAT----------------YCASKHAV 157

Query: 191 LGLVKSLAAELGRYGIRVDCV 211
           +G   +   EL   G+ V  V
Sbjct: 158 VGFTDAARLELRGTGVHVSVV 178

Length = 273

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  102 bits (254), Expect = 4e-26
 Identities = 64/198 (32%), Positives = 105/198 (53%), Gaps = 13/198 (6%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL--GHQDVCYIH 79
           + L G+ A+ITG ++GIG   A  + + GA+V IA    +  + LAD++      V  + 
Sbjct: 5   FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVC 64

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDVS  ++V +++D   A+ G +DI V   CN        +LD P  + +RL   N  G 
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGGIDIAV---CNAGIITVTPMLDMPLEEFQRLQNTNVTGV 121

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
           FL A+ AA+ MV + +G ++  T + +        + N+P   ++Y  SK  ++ L K++
Sbjct: 122 FLTAQAAAKAMVKQGQGGVIINTASMSGH------IINVPQQVSHYCASKAAVIHLTKAM 175

Query: 198 AAELGRYGIRVDCVSHTY 215
           A EL  + IRV+ VS  Y
Sbjct: 176 AVELAPHKIRVNSVSPGY 193

Length = 253

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  101 bits (254), Expect = 6e-26
 Identities = 61/194 (31%), Positives = 100/194 (51%), Gaps = 15/194 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
           R   +V I+TGG+ GIG    + F +NGAKVV     +  GQAL  +L   G     ++ 
Sbjct: 6   RYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVP 65

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CDV+ E ++  L+  TV +FG++D LV N+G +  ++   +  +T   +   LL +N I 
Sbjct: 66  CDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQ---TTDETSAQEFRDLLNLNLIS 122

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL +K+A   +   +   I  ++  G+    +        A  Y  +K  I  + K+LA
Sbjct: 123 YFLASKYALPHLRKSQGNIINLSSLVGSIGQKQ--------AAPYVATKGAITAMTKALA 174

Query: 199 AELGRYGIRVDCVS 212
            +  RYG+RV+C+S
Sbjct: 175 VDESRYGVRVNCIS 188

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  100 bits (251), Expect = 1e-25
 Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 22/189 (11%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L+ +VAI+TGG+ GIG +      + G+ V+  D+++           + DV Y   DVS
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEP---------SYNDVDYFKVDVS 54

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           N+ +VI  +D  ++K+G++DILVN   N     + +I    + + +R++ VN  G FL++
Sbjct: 55  NKEQVIKGIDYVISKYGRIDILVN---NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           K+    M+ + +G I+      + A T      N  A  Y  SK  +LGL +S+A +   
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTR-----NAAA--YVTSKHAVLGLTRSIAVD--- 161

Query: 204 YGIRVDCVS 212
           Y   + CV+
Sbjct: 162 YAPTIRCVA 170

Length = 258

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  100 bits (250), Expect = 2e-25
 Identities = 62/196 (31%), Positives = 87/196 (44%), Gaps = 29/196 (14%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH---CDVSN 84
           + +ITGG SGIG   A  F K GAKVVI D+ +   +  A+ +  +    +H   CDVS 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNV-RKAGGKVHYYKCDVSK 59

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNTIGGFL 141
             EV         + G + IL+N+       G VS   +L+ P  ++E+   VNT+  F 
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNA------GVVSGKKLLELPDEEIEKTFEVNTLAHFW 113

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLVKSLA 198
             K     M+ R  G I+      T A   + GL  I       Y  SK   +G  +SL 
Sbjct: 114 TTKAFLPDMLERNHGHIV------TIA--SVAGL--ISPAGLADYCASKAAAVGFHESLR 163

Query: 199 AELGRY---GIRVDCV 211
            EL  Y   GI+   V
Sbjct: 164 LELKAYGKPGIKTTLV 179

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  100 bits (250), Expect = 2e-25
 Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 14/189 (7%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVS 83
           G+ A++TG ASGIG + A+     GA VV+ D  +   +A A   G     V Y+  DV+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
            E E+ +++    A+FG LDILVN   N   +    I + P  D +R++AV     F   
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVN---NAGIQHVAPIEEFPPEDWDRIIAVMLTSAFHTI 117

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELG 202
           + A   M  +  G I+              GL   P  + Y  +K G++GL K LA E+ 
Sbjct: 118 RAALPHMKKQGWGRIINI--------ASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVA 169

Query: 203 RYGIRVDCV 211
            +GI V+ +
Sbjct: 170 EHGITVNAI 178

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 99.8 bits (249), Expect = 2e-25
 Identities = 76/261 (29%), Positives = 123/261 (47%), Gaps = 43/261 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---ALADKLGHQDVCYIH 79
              G+VA++TGGA+GIG + A  F + GAKVV+AD     G+   AL  + G  +  ++ 
Sbjct: 4   TFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAG-GEALFVA 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CDV+ + EV  LV+ T+A +G+LD    N+G  +E      + +  +++ + ++ VN  G
Sbjct: 63  CDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQG---RLAEGSEAEFDAIMGVNVKG 119

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSL 197
            +L  K+   +M+ +  G I+ T          + GL   P  + Y  SK  ++GL KS 
Sbjct: 120 VWLCMKYQIPLMLAQGGGAIVNT--------ASVAGLGAAPKMSIYAASKHAVIGLTKSA 171

Query: 198 AAELGRYGIRVDCVS----HTYGLAMAEA--------------------IASIANAALYN 233
           A E  + GIRV+ V      T     A                      +  +A+A LY 
Sbjct: 172 AIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYL 231

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
            +  D  S+     L+V+GG 
Sbjct: 232 CS--DGASFTTGHALMVDGGA 250

Length = 253

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 21/190 (11%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVV-----IADVQDNLGQALADKLGHQDVCYIHCD 81
           +V +ITG +SGIG + A      G +V+        ++         +L + ++  +  D
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLES------LGELLNDNLEVLELD 54

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++E  +   V   + +FG++D+LVN   N  Y  F  + +T   ++  L  VN  G   
Sbjct: 55  VTDEESIKAAVKEVIERFGRIDVLVN---NAGYGLFGPLEETSIEEVRELFEVNVFGPLR 111

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           V +    +M  +  G I+  +       T   G        Y  SK  +  L +SL  EL
Sbjct: 112 VTRAFLPLMRKQGSGRIVNVSSVAGLVPTPFLGP-------YCASKAALEALSESLRLEL 164

Query: 202 GRYGIRVDCV 211
             +GI+V  +
Sbjct: 165 APFGIKVTII 174

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 34/250 (13%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQ---DVCYIH 79
           ++G+ A+ITG +SGIGA  A+   + G  ++ +A  +D L +ALA +L  +   +V  I 
Sbjct: 4   MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKL-EALAKELEDKTGVEVEVIP 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+S+   +  L D    + G +D+LVN   N  +  F   L+    + E ++ +N +  
Sbjct: 63  ADLSDPEALERLEDELKERGGPIDVLVN---NAGFGTFGPFLELSLDEEEEMIQLNILAL 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLA 198
             + K     MV R  G I+     G+ A     GL   P    Y  +K  +L   ++L 
Sbjct: 120 TRLTKAVLPGMVERGAGHII---NIGSAA-----GLIPTPYMAVYSATKAFVLSFSEALR 171

Query: 199 AELGRYGIRVDCV--------------SHTYGLAMAEAIAS---IANAALYNMAKDDDTS 241
            EL   G++V  V              S  Y L+  E + S   +A AAL  + K     
Sbjct: 172 EELKGTGVKVTAVCPGPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKALEKGKREI 231

Query: 242 YVGKQNLLVN 251
             G  N  + 
Sbjct: 232 IPGLPNKALA 241

Length = 265

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 98.9 bits (247), Expect = 6e-25
 Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 26/213 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD- 81
           R  GRV ++TG   G+G + A  F + GAKVV+ D+  +   +         V     D 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKV----VDE 57

Query: 82  --------VSNEREVIN---LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLER 130
                   V+N   V +   +V T +  FG++DILVN+   L  R F  + +    D + 
Sbjct: 58  IKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGILRDRSFAKMSE---EDWDL 114

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
           ++ V+  G F V + A   M  ++ G I+ T+         + G  N     Y  +K G+
Sbjct: 115 VMRVHLKGSFKVTRAAWPYMRKQKFGRIINTSSA-----AGLYG--NFGQANYSAAKLGL 167

Query: 191 LGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAI 223
           LGL  +LA E  +Y I  + ++   G  M E +
Sbjct: 168 LGLSNTLAIEGAKYNITCNTIAPAAGSRMTETV 200

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 97.8 bits (244), Expect = 1e-24
 Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 18/192 (9%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDV 82
           L+G+VA+ITGG+ GIG + A+     G KV I A  Q  L +A A+     +V  +  DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            +E +V   VD  VA FG LD+L+ N+G       F  + +    +   ++  N  G F 
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGVGH----FAPVEELTPEEWRLVIDTNLTGAFY 119

Query: 142 VAKHAARVMVPRRRGCILYTTGT--GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
             K A   +  R  G I+    +  GT                Y  SKFG++G  ++   
Sbjct: 120 TIKAAVPAL-KRGGGYII-NISSLAGTNFFAGGAA--------YNASKFGLVGFSEAAML 169

Query: 200 ELGRYGIRVDCV 211
           +L +YGI+V  +
Sbjct: 170 DLRQYGIKVSTI 181

Length = 237

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score = 96.7 bits (241), Expect = 4e-24
 Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 23/209 (11%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYIHCDVS 83
           A++TGG+ GIG + A    + GA VVI      D    +   + +  G   V  +  DVS
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVV--VRADVS 58

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
             ++V  +      +FG+LD+LV++        F  + +   +  +  +  N       A
Sbjct: 59  QPQDVEEMFAAVKERFGRLDVLVSNAAA---GAFRPLSELTPAHWDAKMNTNLKALVHCA 115

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY--GVSKFGILGLVKSLAAEL 201
           + AA++M  R  G I+  +  G+              NY   G +K  +  LV+ LA EL
Sbjct: 116 QQAAKLMRERGGGRIVAISSLGSI---------RALPNYLAVGTAKAALEALVRYLAVEL 166

Query: 202 GRYGIRVDCVSHTYGLAMAEAIASIANAA 230
           G  GIRV+ VS   G+   +A+A   N  
Sbjct: 167 GPRGIRVNAVSP--GVIDTDALAHFPNRE 193

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 99.5 bits (248), Expect = 7e-24
 Identities = 65/193 (33%), Positives = 93/193 (48%), Gaps = 18/193 (9%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVS 83
            RV  ITGGA GIG + A  F   G +++I D      + LA+ LG  H  V     D++
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQ---ADIT 325

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +E  V +      A++G+LD+LVN+    E   F   L+    D  R+  VN  G F  A
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEV--FKPSLEQSAEDFTRVYDVNLSGAFACA 383

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAELG 202
           + AAR+M    +G ++   G+       I  L  +P  N Y  SK  +  L +SLA E  
Sbjct: 384 RAAARLM---SQGGVIVNLGS-------IASLLALPPRNAYCASKAAVTMLSRSLACEWA 433

Query: 203 RYGIRVDCVSHTY 215
             GIRV+ V+  Y
Sbjct: 434 PAGIRVNTVAPGY 446

Length = 520

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 95.5 bits (238), Expect = 8e-24
 Identities = 62/186 (33%), Positives = 89/186 (47%), Gaps = 17/186 (9%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALAD---KLGHQDVCYIHCDVS 83
           VA + G   G+GA+ A+ F   G  V   A  +  L   L D     G         D  
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVP-TDAR 59

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +E EVI L D    + G L++LV N+G N+ +     IL+T     E++  +   GGFL 
Sbjct: 60  DEDEVIALFDLIEEEIGPLEVLVYNAGANVWF----PILETTPRVFEKVWEMAAFGGFLA 115

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           A+ AA+ M+ R RG I++   TG TA   + G     A  +  +KF +  L +S+A ELG
Sbjct: 116 AREAAKRMLARGRGTIIF---TGATA--SLRGRAGFAA--FAGAKFALRALAQSMARELG 168

Query: 203 RYGIRV 208
             GI V
Sbjct: 169 PKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 95.8 bits (238), Expect = 9e-24
 Identities = 57/189 (30%), Positives = 95/189 (50%), Gaps = 10/189 (5%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G+ A+ITG A GIG + AQ + + GA+V IAD+     +A A ++G    C I  DV+
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAIADINLEAARATAAEIG-PAACAISLDVT 59

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           ++  +   V   V ++G +DILVN+    +      I+D  +   +RL A+N  G   + 
Sbjct: 60  DQASIDRCVAALVDRWGSIDILVNNAALFDLA---PIVDITRESYDRLFAINVSGTLFMM 116

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           +  AR M+ + RG  +      + A    E L  +    Y  +K  ++ L +S    L R
Sbjct: 117 QAVARAMIAQGRGGKI--INMASQAGRRGEALVGV----YCATKAAVISLTQSAGLNLIR 170

Query: 204 YGIRVDCVS 212
           +GI V+ ++
Sbjct: 171 HGINVNAIA 179

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 95.5 bits (238), Expect = 1e-23
 Identities = 63/212 (29%), Positives = 94/212 (44%), Gaps = 44/212 (20%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA------------------------DVQ 59
           L G+VA +TG + GIG + A    K GA VV+A                        +++
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 60  DNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS 119
              GQAL           I  DV +E +V  LV+ TV +FG+LDILVN+   +       
Sbjct: 61  AAGGQALP----------IVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS---L 107

Query: 120 ILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP 179
           + DTP    + +  VN  G +L+++ A   MV   +G IL  +   +          ++ 
Sbjct: 108 VEDTPAKRFDLMQRVNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLR----PARGDVA 163

Query: 180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
              Y   K G+  L   LAAEL R+GI V+ +
Sbjct: 164 ---YAAGKAGMSRLTLGLAAELRRHGIAVNSL 192

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score = 93.5 bits (233), Expect = 6e-23
 Identities = 56/187 (29%), Positives = 81/187 (43%), Gaps = 14/187 (7%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNE 85
            ++TG A GIG + A+   + GA+V   D        L   L   G+    Y   DV++ 
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYK-LDVADS 59

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
             V  +V     ++G +D+LVN    L      +I      D +   AVNT G F V++ 
Sbjct: 60  AAVDEVVQRLEREYGPIDVLVNVAGILR---LGAIDSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
            +  M  RR G I+ T G+       +     + A  Y  SK  +  L K L  EL  YG
Sbjct: 117 VSPRMKRRRSGAIV-TVGSNAANVPRM----GMAA--YAASKAALTMLTKCLGLELAPYG 169

Query: 206 IRVDCVS 212
           IR + VS
Sbjct: 170 IRCNVVS 176

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 92.6 bits (230), Expect = 1e-22
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 45/255 (17%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIHCDVSN 84
           VAI+TGGA+GIG + A    K GA VVIAD++    +A+A    + G Q +  + C+V++
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIG-LECNVTS 59

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTP--KSDLERLLAVNTIGGFLV 142
           E+++  +V  TV++FG + ILVN+       G     D P  + D E    +N    F +
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAGG----GGPKPFDMPMTEEDFEWAFKLNLFSAFRL 115

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           ++  A  M     G IL    + ++    +     I A  YG SK  +  + ++LA +LG
Sbjct: 116 SQLCAPHMQKAGGGAIL-NISSMSSENKNV----RIAA--YGSSKAAVNHMTRNLAFDLG 168

Query: 203 RYGIRVDCVSHTYGLAMAEAIAS------------------------IANAALYNMAKDD 238
             GIRV+ V+   G    +A+AS                        IANAAL+  +   
Sbjct: 169 PKGIRVNAVA--PGAVKTDALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSP-- 224

Query: 239 DTSYVGKQNLLVNGG 253
            +++V  Q L V+GG
Sbjct: 225 ASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 15/196 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK---LGHQDVCYIHC 80
           LQG+V IITG +SGIG   A    + GA++V++  ++   + +  +   LG      +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+S+  +   +V+  +  FG LDIL+N+   +  R      DT      +++ VN  G  
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNA-GISMRSLFH--DTSIDVDRKIMEVNYFGPV 117

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAA 199
            + K A   ++ R +G I+          + I G   +P    Y  SK  + G   SL A
Sbjct: 118 ALTKAALPHLIERSQGSIV--------VVSSIAGKIGVPFRTAYAASKHALQGFFDSLRA 169

Query: 200 ELGRYGIRVDCVSHTY 215
           EL    I V  V    
Sbjct: 170 ELSEPNISVTVVCPGL 185

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 78/263 (29%), Positives = 111/263 (42%), Gaps = 57/263 (21%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
             L GRV ++TGG  GIGA  A+ F   GA VV+       G+   + +  +   +   D
Sbjct: 2   LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVV------CGRRAPETVDGRPAEFHAAD 55

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V +  +V  LVD  V + G+LD+LVN   N     +    +      E+++ +N +   L
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVN---NAGGSPYALAAEASPRFHEKIVELNLLAPLL 112

Query: 142 VAKHAARVMVPR-RRGCILYTT---GT----GTTACTEIEGLCNIPANYYGVSKFGILGL 193
           VA+ A  VM  +   G I+      G     GT A              YG +K G+L L
Sbjct: 113 VAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAA--------------YGAAKAGLLNL 158

Query: 194 VKSLAAELGRYGIRVDCVS----HT------YGLAMAEAIASIA-NAALYNMAKDDD--- 239
            +SLA E     +RV+ V      T      YG   AE IA++A    L  +A   D   
Sbjct: 159 TRSLAVEWAP-KVRVNAVVVGLVRTEQSELHYG--DAEGIAAVAATVPLGRLATPADIAW 215

Query: 240 ---------TSYVGKQNLLVNGG 253
                     SYV   NL V+GG
Sbjct: 216 ACLFLASDLASYVSGANLEVHGG 238

Length = 252

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 91.3 bits (227), Expect = 4e-22
 Identities = 64/211 (30%), Positives = 96/211 (45%), Gaps = 27/211 (12%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           ++  +   G+  ++TG +SGIG + A    + GA+VV A        A  D+L  +  C 
Sbjct: 1   MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARN----AAALDRLAGETGCE 56

Query: 78  -IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCN-LEYRGFVSILDTPKSDLERLLAV 134
            +  DV ++      +   +A  G  D LVN  G   LE     S LD      +R++AV
Sbjct: 57  PLRLDVGDDAA----IRAALAAAGAFDGLVNCAGIASLE-----SALDMTAEGFDRVMAV 107

Query: 135 NTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILG 192
           N  G  LVA+H AR M+   R G I+          +    L  +P +  Y  SK  +  
Sbjct: 108 NARGAALVARHVARAMIAAGRGGSIVNV--------SSQAALVGLPDHLAYCASKAALDA 159

Query: 193 LVKSLAAELGRYGIRVDCVSHTYGLA-MAEA 222
           + + L  ELG +GIRV+ V+ T  L  MA  
Sbjct: 160 ITRVLCVELGPHGIRVNSVNPTVTLTPMAAE 190

Length = 245

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 91.0 bits (226), Expect = 6e-22
 Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 13/193 (6%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLGHQDVCYIH 79
            + +V +ITGG SG+G + A    K GAK+ + D+ +        AL +     +V  I 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DVS+E +V   VD TV +FG++D   N+   +E +      D    + ++++++N  G 
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNA-GIEGKQ-NLTEDFGADEFDKVVSINLRGV 118

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F   +   +VM  +  G I+ T   G      I G+ N   + Y  +K G++GL ++ A 
Sbjct: 119 FYGLEKVLKVMREQGSGMIVNTASVGG-----IRGVGN--QSGYAAAKHGVVGLTRNSAV 171

Query: 200 ELGRYGIRVDCVS 212
           E G+YGIR++ ++
Sbjct: 172 EYGQYGIRINAIA 184

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 91.1 bits (226), Expect = 6e-22
 Identities = 79/262 (30%), Positives = 116/262 (44%), Gaps = 43/262 (16%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK---LGHQDV 75
           S   RL G+ AIITG  +GIG   A  F   GA VV++D+  +    + D+   LG Q  
Sbjct: 4   SDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAF 63

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
               CD+++E+E+  L D  ++K GK+DILVN+      + F    D P +D  R   +N
Sbjct: 64  A-CRCDITSEQELSALADFALSKLGKVDILVNNAGGGGPKPF----DMPMADFRRAYELN 118

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               F +++  A  M     G IL  T              NI    Y  SK     LV+
Sbjct: 119 VFSFFHLSQLVAPEMEKNGGGVILTITSMAAEN-------KNINMTSYASSKAAASHLVR 171

Query: 196 SLAAELGRYGIRVDCVSHTYGLAMAEAIAS------------------------IANAAL 231
           ++A +LG   IRV+ ++   G  + +A+ S                        IANAAL
Sbjct: 172 NMAFDLGEKNIRVNGIAP--GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL 229

Query: 232 YNMAKDDDTSYVGKQNLLVNGG 253
           +  +     S+V  Q L V+GG
Sbjct: 230 FLCSP--AASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 90.7 bits (225), Expect = 6e-22
 Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 20/191 (10%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYIH 79
           LQG+VA++TG +SGIG + A+     GA V IA  + +  +ALAD+L    G   V  + 
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALV--LE 58

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            DV++E++V   V+ TV   G+LDILV N+G  L       + D   +D  R++  N +G
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIML----LGPVEDADTTDWTRMIDTNLLG 114

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSL 197
                  A    + R +G I+          + + G   +  +  Y  +KFG+    + L
Sbjct: 115 LMYTTHAALPHHLLRNKGTIV--------NISSVAGRVAVRNSAVYNATKFGVNAFSEGL 166

Query: 198 AAELGRYGIRV 208
             E+   G+RV
Sbjct: 167 RQEVTERGVRV 177

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 90.5 bits (225), Expect = 7e-22
 Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 36/256 (14%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ------DVCY 77
           L  R  +ITGG+ G+G + A     +GA V++ D+    G+A AD +             
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DV +       +D  V +FG+LDILVN+        F  +      + + ++ VN  
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSI---EEWDDVIDVNLD 120

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G F V + A   M+  RRG  +    +         G  N     Y  SK G++GL K+L
Sbjct: 121 GFFNVTQAALPPMIRARRGGRIVNIAS-VAGVRGNRGQVN-----YAASKAGLIGLTKTL 174

Query: 198 AAELGRYGIRVDCVSHTY-------GLAMAEAI------------ASIANAALYNMAKDD 238
           A EL   GI V+ V+            A  E +              +A    + ++  D
Sbjct: 175 ANELAPRGITVNAVAPGAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFLVS--D 232

Query: 239 DTSYVGKQNLLVNGGF 254
             SYV  Q + V+GGF
Sbjct: 233 AASYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score = 90.1 bits (224), Expect = 1e-21
 Identities = 62/191 (32%), Positives = 91/191 (47%), Gaps = 16/191 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGHQ--DVCYIH 79
           RL G+VA++TGG  G+GA+ A+ F + GA  +VI       G+A A +L        ++ 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+S+  +   +V      FG+LD LVN+   L  RG  +ILDT     +R  AVN    
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALVNAA-GLTDRG--TILDTSPELFDRHFAVNVRAP 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACT--EIEGLCNIPANYYGVSKFGILGLVKSL 197
           F + + A ++M  RRR       GT     +     G   + A  Y  SK  +  L ++ 
Sbjct: 120 FFLMQEAIKLM--RRRK----AEGTIVNIGSMSAHGGQPFLAA--YCASKGALATLTRNA 171

Query: 198 AAELGRYGIRV 208
           A  L R  IRV
Sbjct: 172 AYALLRNRIRV 182

Length = 260

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 90.0 bits (224), Expect = 1e-21
 Identities = 74/258 (28%), Positives = 106/258 (41%), Gaps = 41/258 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-------DVQDNLGQALADKLGHQDV 75
           +L+G+ A+ITGG SGIG + A  F + GA V I        D ++     L ++ G + +
Sbjct: 23  KLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETK--KLIEEEGRKCL 80

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
             I  D+ +E    +LV   V +FGKLDILVN           SI D     LE+    N
Sbjct: 81  L-IPGDLGDESFCRDLVKEVVKEFGKLDILVN--NAAYQHPQESIEDITTEQLEKTFRTN 137

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               F + K A   +  ++   I+ T  T  TA      L +     Y  +K  I+   +
Sbjct: 138 IFSMFYLTKAALPHL--KKGSSIINT--TSVTAYKGSPHLLD-----YAATKGAIVAFTR 188

Query: 196 SLAAELGRYGIRVDCVS--------------------HTYGLAMAEAIASIANAALYNMA 235
            L+ +L   GIRV+ V+                        + M  A      A  Y   
Sbjct: 189 GLSLQLAEKGIRVNAVAPGPIWTPLIPSSFPEEKVSEFGSQVPMGRAGQPAEVAPAYVFL 248

Query: 236 KDDDTSYVGKQNLLVNGG 253
              D+SYV  Q L VNGG
Sbjct: 249 ASQDSSYVTGQVLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 89.8 bits (223), Expect = 2e-21
 Identities = 68/263 (25%), Positives = 106/263 (40%), Gaps = 45/263 (17%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA----LADKLGHQDVCY 77
           + L G+VA +TG  SGIG   A    + GA V + D++ + G A      +  G +    
Sbjct: 4   FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRR-AIQ 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           I  DV+++ ++   V  T A+ G L + VN+             +  +   + ++ +N  
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAA---GIANANPAEEMEEEQWQTVMDINLT 119

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN------YYGVSKFGIL 191
           G FL  +  AR M+    G I+            I  +  I  N      +Y  SK G++
Sbjct: 120 GVFLSCQAEARAMLENGGGSIV-----------NIASMSGIIVNRGLLQAHYNASKAGVI 168

Query: 192 GLVKSLAAELGRYGIRVDCVSHTYGLA-------MAEAIASI-ANAALYNMAKDDD---- 239
            L KSLA E    GIRV+ +S  Y          M            +  MAK D+    
Sbjct: 169 HLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGP 228

Query: 240 --------TSYVGKQNLLVNGGF 254
                    S+    +LLV+GGF
Sbjct: 229 AVFLLSDAASFCTGVDLLVDGGF 251

Length = 254

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 89.2 bits (221), Expect = 3e-21
 Identities = 58/191 (30%), Positives = 92/191 (48%), Gaps = 13/191 (6%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH--CD 81
           L G+ A++TG ASGIG   A    + GA V IAD+  +   A+AD++       I    D
Sbjct: 5   LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMD 64

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V+NE  V   +D    +FG +DILV+   N   +    I +   +D +++ A++  G FL
Sbjct: 65  VTNEDAVNAGIDKVAERFGSVDILVS---NAGIQIVNPIENYSFADWKKMQAIHVDGAFL 121

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAE 200
             K A + M    RG ++   G+       +      P  + Y  +K G+LGL + LA E
Sbjct: 122 TTKAALKHMYKDDRGGVVIYMGS-------VHSHEASPLKSAYVTAKHGLLGLARVLAKE 174

Query: 201 LGRYGIRVDCV 211
             ++ +R   V
Sbjct: 175 GAKHNVRSHVV 185

Length = 262

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 89.0 bits (221), Expect = 3e-21
 Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 40/206 (19%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALA 67
           Y  L+G+V +ITGG++G+G + A  F K  AKVVI              +++   G+A+A
Sbjct: 2   YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIA 61

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD 127
                     +  DV+ E +V+NL+ T V +FG LD+++N   N      V   +    D
Sbjct: 62  ----------VKGDVTVESDVVNLIQTAVKEFGTLDVMIN---NAGIENAVPSHEMSLED 108

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIP---ANYY 183
             +++  N  G FL ++ A +  V    +G I+       ++  E      IP     +Y
Sbjct: 109 WNKVINTNLTGAFLGSREAIKYFVEHDIKGNII-----NMSSVHEQ-----IPWPLFVHY 158

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVD 209
             SK G+  + ++LA E    GIRV+
Sbjct: 159 AASKGGVKLMTETLAMEYAPKGIRVN 184

Length = 261

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 88.6 bits (220), Expect = 5e-21
 Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 20/215 (9%)

Query: 24  LQGRVAIITGGA-SGIGASAAQLFHKNGAKVVIADVQDN-LGQA---LADKLGHQDVCYI 78
           L G+V ++T  A +GIG++ A+   + GA+VVI+D+ +  LG+    LA +LG   V  +
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAV 74

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV++E +V  L+D  V + G+LD+LVN   N    G   ++D    +  R+L V   G
Sbjct: 75  VCDVTSEAQVDALIDAAVERLGRLDVLVN---NAGLGGQTPVVDMTDDEWSRVLDVTLTG 131

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGT--GTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
            F   + A R M  R  G ++    +  G  A             +Y  +K G++ L + 
Sbjct: 132 TFRATRAALRYMRARGHGGVIVNNASVLGWRAQHG--------QAHYAAAKAGVMALTRC 183

Query: 197 LAAELGRYGIRVDCVSHTYGLAMAEAIASIANAAL 231
            A E   YG+R++ V+ +  +AM   +A + +A L
Sbjct: 184 SALEAAEYGVRINAVAPS--IAMHPFLAKVTSAEL 216

Length = 262

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 5e-21
 Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 30/201 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L G+VA+ITGG SGIG +  + F   GA+V + +       +L  + G   V  +  DV
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG-DHVLVVEGDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE----RLLAVNTIG 138
           ++  +    VD TV  FGKLD  V +    +Y    S++D P   L+     +  VN  G
Sbjct: 62  TSYADNQRAVDQTVDAFGKLDCFVGNAGIWDY--NTSLVDIPAETLDTAFDEIFNVNVKG 119

Query: 139 GFLVAKHAARVMVPRRRGCILYT-------TGTGTTACTEIEGLCNIPANYYGVSKFGIL 191
             L AK A   +     G +++T        G G        G        Y  SK  ++
Sbjct: 120 YLLGAKAALPALK-ASGGSMIFTLSNSSFYPGGG--------GPL------YTASKHAVV 164

Query: 192 GLVKSLAAELGRYGIRVDCVS 212
           GLV+ LA EL    IRV+ V+
Sbjct: 165 GLVRQLAYELAPK-IRVNGVA 184

Length = 263

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 88.2 bits (219), Expect = 5e-21
 Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 49/264 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYI 78
           L G+VAIITG +SGIGA  A LF + GA++ +       +++     L   +  + +  +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTI 137
             D++ E     ++ TT+AKFG+LDILVN+ G     +G     D    + ++++ +N  
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILA--KG--GGEDQDIEEYDKVMNLNLR 116

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKS 196
               + K A   ++ + +G I+          + + G  + P   YY +SK  +    + 
Sbjct: 117 AVIYLTKLAVPHLI-KTKGEIVNV--------SSVAGGRSFPGVLYYCISKAALDQFTRC 167

Query: 197 LAAELGRYGIRVDCVS---------------------------HTYGLAMAEAIASIANA 229
            A EL   G+RV+ VS                            T+ L     +  +A A
Sbjct: 168 TALELAPKGVRVNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEA 227

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGG 253
             +     D +S++  Q L V+GG
Sbjct: 228 IAF--LASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 88.2 bits (219), Expect = 5e-21
 Identities = 59/191 (30%), Positives = 95/191 (49%), Gaps = 20/191 (10%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKV-VIADVQDNLGQALADKLGHQDV--CYIHC 80
           LQG+ A+ITG   GIG + A    K G  V ++A  ++NL +A+A+++    V       
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGVKVVIATA 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DVS+  EV   ++    + G +DIL+N   N     F   L+   ++ E+++ VN +G +
Sbjct: 64  DVSDYEEVTAAIEQLKNELGSIDILIN---NAGISKFGKFLELDPAEWEKIIQVNLMGVY 120

Query: 141 LVAKHAARVMVPRRRGCIL---YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
              +     M+ R+ G I+    T G    A T          + Y  SKFG+LGL +SL
Sbjct: 121 YATRAVLPSMIERQSGDIINISSTAGQKGAAVT----------SAYSASKFGVLGLTESL 170

Query: 198 AAELGRYGIRV 208
             E+ ++ IRV
Sbjct: 171 MQEVRKHNIRV 181

Length = 239

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score = 88.9 bits (221), Expect = 6e-21
 Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 22/197 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA------DVQDNLGQALADKLGHQDVC 76
           +L+G+VA+ITGG SGIG + A LF K GA + I       D  +   +   +K G +  C
Sbjct: 43  KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANET--KQRVEKEGVK--C 98

Query: 77  YIHC-DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
            +   DVS+E    + V+ TV + G+LDILVN+      +   S+ D     L++    N
Sbjct: 99  LLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQ--SLEDITAEQLDKTFKTN 156

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               F + K A   +  ++   I+      T + T  EG  N     Y  +K  I    +
Sbjct: 157 IYSYFHMTKAALPHL--KQGSAII-----NTGSITGYEG--NETLIDYSATKGAIHAFTR 207

Query: 196 SLAAELGRYGIRVDCVS 212
           SLA  L + GIRV+ V+
Sbjct: 208 SLAQSLVQKGIRVNAVA 224

Length = 290

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score = 88.1 bits (219), Expect = 7e-21
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 12/188 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALAD-KLGHQDVCYIHCDVS 83
           G+VA++T  +SGIG + A+   + GA+V I    ++NL +A ++ + G   V  +  D++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  ++  LV+     FG++DILVN+        F  + D    D      +  +    + 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAGGPPPGPFAELTD---EDWLEAFDLKLLSVIRIV 117

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           +     M  R  G I+  +            L N       V++ G++GLVK+L+ EL  
Sbjct: 118 RAVLPGMKERGWGRIVNISSLTVKEPEPNLVLSN-------VARAGLIGLVKTLSRELAP 170

Query: 204 YGIRVDCV 211
            G+ V+ V
Sbjct: 171 DGVTVNSV 178

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.5 bits (217), Expect = 1e-20
 Identities = 59/193 (30%), Positives = 93/193 (48%), Gaps = 18/193 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           R +G+VA+ITGG  GIG + A+ F + GAKV +           A +L  + V  I CDV
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREKGVFTIKCDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            N  +V    +    +FG++D+LVN   N      +   +  +    +++ +N  G    
Sbjct: 61  GNRDQVKKSKEVVEKEFGRVDVLVN---NAGIMYLMPFEEFDEEKYNKMIKINLNGAIYT 117

Query: 143 AKHAARVMVPRRRGCIL---YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
                 ++   + G I+      G GT A    EG       +Y ++K GI+ L + LA 
Sbjct: 118 TYEFLPLLKLSKNGAIVNIASNAGIGTAA----EG-----TTFYAITKAGIIILTRRLAF 168

Query: 200 ELGRYGIRVDCVS 212
           ELG+YGIRV+ V+
Sbjct: 169 ELGKYGIRVNAVA 181

Length = 255

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 86.8 bits (215), Expect = 1e-20
 Identities = 55/194 (28%), Positives = 78/194 (40%), Gaps = 33/194 (17%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDVSNERE 87
           A++TG + GIG + A+L H  G +V I A  +  L  A A +L    V  +  DV +E +
Sbjct: 3   ALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAAQELE--GVLGLAGDVRDEAD 60

Query: 88  VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA 147
           V   VD     FG LD LVN   N        + +    +   +L  N  G F     AA
Sbjct: 61  VRRAVDAMEEAFGGLDALVN---NAGVGVMKPVEELTPEEWRLVLDTNLTGAFYCIHKAA 117

Query: 148 RVMVPRRRGCIL----------YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             ++ R  G I+          +  G                   Y  SKFG+LGL ++ 
Sbjct: 118 PALLRRGGGTIVNVGSLAGKNAFKGGAA-----------------YNASKFGLLGLSEAA 160

Query: 198 AAELGRYGIRVDCV 211
             +L    IRV  V
Sbjct: 161 MLDLREANIRVVNV 174

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 87.5 bits (217), Expect = 1e-20
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 13/206 (6%)

Query: 12  NNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADK 69
             +      ++ L G+VAI+TGG +G+G   A    K GA ++I     N    + L +K
Sbjct: 1   MELDKFSMDFFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGTNWDETRRLIEK 60

Query: 70  LGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE 129
            G + V ++  D++       +V   + +FGK+DILVN+   +       +L+    D  
Sbjct: 61  EG-RKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRA---PLLEYKDEDWN 116

Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
            ++ +N    + +++  A+VM  +  G I+        +    +G   +PA  Y  SK G
Sbjct: 117 AVMDINLNSVYHLSQAVAKVMAKQGSGKII-----NIASMLSFQGGKFVPA--YTASKHG 169

Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTY 215
           + GL K+ A EL  Y I+V+ ++  Y
Sbjct: 170 VAGLTKAFANELAAYNIQVNAIAPGY 195

Length = 258

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 86.6 bits (215), Expect = 2e-20
 Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 19/199 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALAD--KLGHQDVCYIH 79
            L+ +V +ITGGA G+G + A+   + GAK+ + D+ Q+ L +A+A+   LG +   Y  
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYA- 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILD---TPKSDLER---LLA 133
            +V++E +V          FG+L+ L+N+   L     V   D   T K  LE+   ++ 
Sbjct: 61  ANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVID 120

Query: 134 VNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILG 192
           VN  G FL  + AA  M+    +G I+          + I    N+    Y  SK G+  
Sbjct: 121 VNLTGVFLCGREAAAKMIESGSKGVII--------NISSIARAGNMGQTNYSASKAGVAA 172

Query: 193 LVKSLAAELGRYGIRVDCV 211
           +  + A EL RYGIRV  +
Sbjct: 173 MTVTWAKELARYGIRVAAI 191

Length = 253

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 89.5 bits (222), Expect = 2e-20
 Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 24/237 (10%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ----DNLGQALADKLGHQDVCYIH 79
           L  RVA +TGGA GIG   A+     GA VV+AD+     + +   +  + G      + 
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALK 471

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNT 136
            DV++E+ V          +G +DI+VN+       G  +     +T   + +  L +  
Sbjct: 472 MDVTDEQAVKAAFADVALAYGGVDIVVNNA------GIATSSPFEETTLQEWQLNLDILA 525

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVK 195
            G FLVA+ A R M  R +G      G           +     A+ Y  +K     L +
Sbjct: 526 TGYFLVAREAFRQM--REQG-----LGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLAR 578

Query: 196 SLAAELGRYGIRVDCVSH---TYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLL 249
            LAAE G YGIRV+ V+      G  + +       AA Y +  D+   +  K+ LL
Sbjct: 579 CLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL 635

Length = 676

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 86.4 bits (214), Expect = 3e-20
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 22/192 (11%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIHCD 81
             +VA++ GG   +G        + G  V +AD+     + +AD++  +          D
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
            +NE+ VI L       F ++D+LV ++G     +    I D    D +R L VN +G F
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAK----ITDFELGDFDRSLQVNLVGYF 116

Query: 141 LVAKHAARVMVPRRRG----CILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
           L A+  +++M+  R G     I   + +G        G        Y  +KFG +GL +S
Sbjct: 117 LCAREFSKLMI--RDGIQGRIIQINSKSGKVGSKHNSG--------YSAAKFGGVGLTQS 166

Query: 197 LAAELGRYGIRV 208
           LA +L  +GI V
Sbjct: 167 LALDLAEHGITV 178

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 86.4 bits (214), Expect = 3e-20
 Identities = 69/264 (26%), Positives = 113/264 (42%), Gaps = 47/264 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVS 83
           +VA++TGGA GIG   A+   K+G  V +AD+ +   +  A ++   G + V Y   DVS
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYK-LDVS 59

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           ++ +V + +D    KFG  D++VN   N        IL+  + +L+++  VN  G     
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVN---NAGVAPITPILEITEEELKKVYNVNVKGVLFGI 116

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTE--IEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           + AAR    +  G      G    A +    EG   + A  Y  +KF + GL ++ A EL
Sbjct: 117 QAAARQFKKQGHG------GKIINAASIAGHEGNPILSA--YSSTKFAVRGLTQTAAQEL 168

Query: 202 GRYGIRVDC-----------------VSHTYGLAMAEAIASIAN-------------AAL 231
              GI V+                   S   G  + E     ++             A L
Sbjct: 169 APKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGL 228

Query: 232 YNMAKDDDTSYVGKQNLLVNGGFR 255
            +    +D+ Y+  Q++LV+GG  
Sbjct: 229 VSFLASEDSDYITGQSILVDGGMV 252

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score = 86.6 bits (215), Expect = 3e-20
 Identities = 59/188 (31%), Positives = 87/188 (46%), Gaps = 18/188 (9%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ----DNLGQALADKLGHQDVCYIHCD 81
           G+V IITG + GIG + A    + GA++V+A        +L Q LAD     +   +  D
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH--GGEALVVPTD 58

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           VS+      L++  VA+FG +DILVN+     +  F  + D   S  ER++ VN +G  +
Sbjct: 59  VSDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDL--SVFERVMRVNYLGA-V 115

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
              HAA   +   RG I           + + GL  +P    Y  SK  + G   SL  E
Sbjct: 116 YCTHAALPHLKASRGQI--------VVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIE 167

Query: 201 LGRYGIRV 208
           L   G+ V
Sbjct: 168 LADDGVAV 175

Length = 263

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 85.9 bits (213), Expect = 4e-20
 Identities = 74/266 (27%), Positives = 112/266 (42%), Gaps = 59/266 (22%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALADKL 70
           L  +VAI+TG + GIGA+ A+    +G  V +             A+++   G+A+A   
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIA--- 59

Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLER 130
                  +  DV++   V  L D     FG++D+LVN+   +      +I D    D +R
Sbjct: 60  -------VQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPL---GTIADFDLEDFDR 109

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
            +A N  G F+V + AAR +   + G I+  +       T +  L       Y  SK  +
Sbjct: 110 TIATNLRGAFVVLREAARHL--GQGGRIINLS-------TSVIALPLPGYGPYAASKAAV 160

Query: 191 LGLVKSLAAELGRYGIRVDCVS-------------------HTYGLAMAEAIAS---IAN 228
            GLV  LA EL   GI V+ V+                      GLA  E + +   IA 
Sbjct: 161 EGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAA 220

Query: 229 AALYNMAKDDDTSYVGKQNLLVNGGF 254
           A  +      D ++V  Q L VNGGF
Sbjct: 221 AVAFLAGP--DGAWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 86.3 bits (214), Expect = 4e-20
 Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 14/191 (7%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALAD--KLGHQDVCYI 78
           + L+G++A+ITG + GIG + A+ + K GA +V  D+ Q+ + + LA   +LG +   Y+
Sbjct: 6   FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYV 65

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV++E  V  +V     + G +DILVN   N      + +L+    D  +++ ++   
Sbjct: 66  -CDVTDEDGVQAMVSQIEKEVGVIDILVN---NAGIIKRIPMLEMSAEDFRQVIDIDLNA 121

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            F+V+K     M+ +  G I+         C+ +  L     + Y  +K G+  L K++A
Sbjct: 122 PFIVSKAVIPSMIKKGHGKII-------NICSMMSELGRETVSAYAAAKGGLKMLTKNIA 174

Query: 199 AELGRYGIRVD 209
           +E G   I+ +
Sbjct: 175 SEYGEANIQCN 185

Length = 265

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 86.6 bits (215), Expect = 4e-20
 Identities = 54/199 (27%), Positives = 86/199 (43%), Gaps = 34/199 (17%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHC 80
             L G+V ++TG A GIGA  A+  H  GAK+ + D+++    ALA +LG    V  +  
Sbjct: 5   TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVA 64

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DV++   +    +  V +FG +D++V N+G         S+         R++ VN +G 
Sbjct: 65  DVTDLAAMQAAAEEAVERFGGIDVVVANAGIA----SGGSVAQVDPDAFRRVIDVNLLGV 120

Query: 140 FLVAKHAARVMVP---RRRGCIL-------YTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
           F    H  R  +P    RRG +L       +    G  A              Y  SK G
Sbjct: 121 F----HTVRATLPALIERRGYVLQVSSLAAFAAAPGMAA--------------YCASKAG 162

Query: 190 ILGLVKSLAAELGRYGIRV 208
           +     +L  E+  +G+ V
Sbjct: 163 VEAFANALRLEVAHHGVTV 181

Length = 296

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 86.0 bits (213), Expect = 6e-20
 Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 17/194 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYIH 79
           RL+ +VA+ITG ++GIG ++A    + GA V+  D+ + +      +    G       H
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKA--YH 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+S+E++V +       +FG++D+L N+       G   I + P    ++++AV+  G 
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAG--RIHEYPVDVFDKIMAVDMRGT 118

Query: 140 FLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
           FL+ K    +M+  + G I+ T+  +G  A     G        Y  +K  ++   KS+A
Sbjct: 119 FLMTKMLLPLMM-EQGGSIINTSSFSGQAADLYRSG--------YNAAKGAVINFTKSIA 169

Query: 199 AELGRYGIRVDCVS 212
            E GR GIR + ++
Sbjct: 170 IEYGRDGIRANAIA 183

Length = 272

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score = 85.1 bits (211), Expect = 9e-20
 Identities = 61/252 (24%), Positives = 111/252 (44%), Gaps = 25/252 (9%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD---VCYIHCD 81
           + ++ +ITG A  IG +  +     GA++++AD+     + L ++L +     V  +  D
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++++  +  L+++ + KFG++DIL+N+             + P      +L VN  G FL
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 142 VAKHAARVMVPRRRGCILYTTGT-GTTACT-EIEGLCNI--PANYYGVSKFGILGLVKSL 197
            ++   ++   + +G I+      G  A    I     +  P  Y  V K GI+ L K L
Sbjct: 121 CSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQMYSPVEY-SVIKAGIIHLTKYL 179

Query: 198 AAELGRYGIRVDCVSHTYGLAMAEAIASIAN----AALYNMAKDDD------------TS 241
           A      GIRV+ +S   G+   +    +        L  M   +D            +S
Sbjct: 180 AKYYADTGIRVNAISPG-GILNNQPSEFLEKYTKKCPLKRMLNPEDLRGAIIFLLSDASS 238

Query: 242 YVGKQNLLVNGG 253
           YV  QNL+++GG
Sbjct: 239 YVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 84.2 bits (209), Expect = 1e-19
 Identities = 64/251 (25%), Positives = 100/251 (39%), Gaps = 44/251 (17%)

Query: 33  GGASGIGASAAQLFHKNGAKVVI--ADVQDNLG--QALADKLGHQDVCYIHCDVSNEREV 88
              + I  + A+   + GA+VV+        +G    LA +L   DV  I  DV+++ ++
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPA-DV--IPLDVTSDEDI 59

Query: 89  INLVDTTVAKFGKLDILVNSGCN-LEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA 147
             L +      GK+D LV+S     E R     LDT +    + L ++      +AK A 
Sbjct: 60  DELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAK 119

Query: 148 RVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAELGRYGI 206
            +M     G I+  +                P     GV+K  +  L + LA ELGR GI
Sbjct: 120 PLMNEG--GSIVALSYIAAERV--------FPGYGGMGVAKAALESLARYLAYELGRKGI 169

Query: 207 RVDCVS------------------HTYGLAMAE-----AIASIANAALYNMAKDDDTSYV 243
           RV+ +S                    Y   MA      +   +ANAA + ++  D    +
Sbjct: 170 RVNTISAGPTKTTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLS--DLARGI 227

Query: 244 GKQNLLVNGGF 254
             Q L V+GGF
Sbjct: 228 TGQILYVDGGF 238

Length = 239

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 44/263 (16%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALA--DKLGHQDVCYIHC 80
           L+G+V +++G   G+G + A    + GA VV+ A   + L +  A  D LG + +  +  
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRAL-AVPT 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+++E +  NLV   + +FG++D LVN+   +       + D   +    ++ +N +G  
Sbjct: 62  DITDEDQCANLVALALERFGRVDALVNNAFRVPS--MKPLADADFAHWRAVIELNVLGTL 119

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            + +     +     G I+              G        Y ++K  +L   +SLA E
Sbjct: 120 RLTQAFTPALA-ESGGSIVMINSMVLRHSQPKYG-------AYKMAKGALLAASQSLATE 171

Query: 201 LGRYGIRVDCV-----------------SHTYGLAMAEAIASIA-NAALYNMAKDDD--- 239
           LG  GIRV+ V                 +  YG+ + +  A  A N+ L  +  DD+   
Sbjct: 172 LGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVAS 231

Query: 240 ---------TSYVGKQNLLVNGG 253
                       +  Q L VN G
Sbjct: 232 AVLFLASDLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score = 84.2 bits (209), Expect = 2e-19
 Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 17/189 (8%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
             G+   +TG A GIG + A  F + GAKV+  D      +       +    +   DVS
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQE------DYPFATF-VLDVS 58

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +   V  +    +A+ G LD+LVN+   L      +       D ++  AVN  G F + 
Sbjct: 59  DAAAVAQVCQRLLAETGPLDVLVNAAGILR---MGATDSLSDEDWQQTFAVNAGGAFNLF 115

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           +        +R G I+ T G+       I     + A  YG SK  +  L K +  EL  
Sbjct: 116 RAVMPQFRRQRSGAIV-TVGSNAAHVPRI----GMAA--YGASKAALTSLAKCVGLELAP 168

Query: 204 YGIRVDCVS 212
           YG+R + VS
Sbjct: 169 YGVRCNVVS 177

Length = 252

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 84.1 bits (208), Expect = 2e-19
 Identities = 60/191 (31%), Positives = 92/191 (48%), Gaps = 11/191 (5%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLGHQ-DVCYIHCD 81
           L  +VA++T    GIG + A+   ++GA VV++   Q N+ +A+A   G    V    C 
Sbjct: 8   LANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGTVCH 67

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V    +   LV T V   G +DILV++     +  F +ILD+ +   +++L VN     L
Sbjct: 68  VGKAEDRERLVATAVNLHGGVDILVSNAAVNPF--FGNILDSTEEVWDKILDVNVKATAL 125

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           + K     M  R  G ++  +     A     GL       Y VSK  +LGL K+LA EL
Sbjct: 126 MTKAVVPEMEKRGGGSVVIVSSVA--AFHPFPGL-----GPYNVSKTALLGLTKNLAPEL 178

Query: 202 GRYGIRVDCVS 212
               IRV+C++
Sbjct: 179 APRNIRVNCLA 189

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 84.3 bits (209), Expect = 2e-19
 Identities = 52/195 (26%), Positives = 84/195 (43%), Gaps = 36/195 (18%)

Query: 31  ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREV 88
           ITG ASG+G + A  + + G ++ +ADV +  G+     L     D  Y  CDV +  ++
Sbjct: 5   ITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQL 64

Query: 89  INLVDTTVAKFGKLDILVN-----SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
             L      K+G +D++VN     SG      GF    +    D +  +A+N +G     
Sbjct: 65  TALAQACEEKWGGIDVIVNNAGVASG------GF--FEELSLEDWDWQIAINLMG----- 111

Query: 144 KHAARVMVPRRRGC-----ILYTTGTGTTA-CTEIEGLCNIPA-NYYGVSKFGILGLVKS 196
                 +V   +GC     +     +G       + GL   PA + Y V+K G++ L ++
Sbjct: 112 ------VV---KGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSET 162

Query: 197 LAAELGRYGIRVDCV 211
           L  EL    I V  V
Sbjct: 163 LLVELADDEIGVHVV 177

Length = 270

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 83.3 bits (206), Expect = 4e-19
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 64/267 (23%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLGHQDVCYIHCDVSNE 85
           +V ++TG + G+GA+ A+ F + GA+VV+   +     +A+A + G + +  I  DV + 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAGERAIA-IQADVRDR 59

Query: 86  REVINLVDTTVAKFGKLDILVNSGCN--------------LEYRGFVSILDTPKSDLERL 131
            +V  +++     FG +D +VN+                 +++  +   L+         
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEG-------- 111

Query: 132 LAVNTIGGFL-VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
                + G L + +        R  G ++     GT     +     +P + Y  +K  +
Sbjct: 112 ----AVKGALNLLQAVLPDFKERGSGRVI---NIGT----NLFQNPVVPYHDYTTAKAAL 160

Query: 191 LGLVKSLAAELGRYGIRVDCVSHTYGL------------AMAEAIAS------------I 226
           LG  +++A ELG YGI V+ VS   GL             + +AIA             I
Sbjct: 161 LGFTRNMAKELGPYGITVNMVSG--GLLKVTDASAATPKEVFDAIAQTTPLGKVTTPQDI 218

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGG 253
           A+A L+  A     +  G QNL+V+GG
Sbjct: 219 ADAVLF-FASPWARAVTG-QNLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 82.9 bits (205), Expect = 5e-19
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 11/185 (5%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           R A++TG A GIG + A+ F   G +V+  D+      A AD LG      + CD+++  
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAA 62

Query: 87  EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA 146
            +   +    A+ G +D+LV    N       S+ DT  +      A+N    +L  +  
Sbjct: 63  SLAAALANAAAERGPVDVLVA---NAGAARAASLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 147 ARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGI 206
              M+ R RG +             + G+  +    Y  +K G++   K LA E GR+GI
Sbjct: 120 LEGMLKRSRGAV--------VNIGSVNGMAALGHPAYSAAKAGLIHYTKLLAVEYGRFGI 171

Query: 207 RVDCV 211
           R + V
Sbjct: 172 RANAV 176

Length = 257

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 82.5 bits (204), Expect = 6e-19
 Identities = 53/190 (27%), Positives = 90/190 (47%), Gaps = 22/190 (11%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN 84
            G+VA+IT  A GIG + A  F + GA V+  D+ +   + L    G         DV++
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIATDINEEKLKELERGPGITTR---VLDVTD 57

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTIGGFL 141
           + +    V     + G++D+L N        GFV   SILD    D +  + +N    +L
Sbjct: 58  KEQ----VAALAKEEGRIDVLFNCA------GFVHHGSILDCEDDDWDFAMNLNVRSMYL 107

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           + K     M+ R+ G I+      ++  + I+G+ N     Y  +K  ++GL KS+AA+ 
Sbjct: 108 MIKAVLPKMLARKDGSIINM----SSVASSIKGVPNRFV--YSTTKAAVIGLTKSVAADF 161

Query: 202 GRYGIRVDCV 211
            + GIR + +
Sbjct: 162 AQQGIRCNAI 171

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 83.2 bits (206), Expect = 6e-19
 Identities = 64/222 (28%), Positives = 89/222 (40%), Gaps = 41/222 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQDVCYIHC-- 80
           L GRV I+TG   GIG + A  F   GA+VV+ D+     G A         V  I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 81  --------DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLL 132
                   D+++     NLVD  V  FG LD+LVN+   L  R   +     + + + ++
Sbjct: 64  GEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIAN---MSEEEWDAVI 120

Query: 133 AVNTIGGFLVAKHAARVM-------VPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV 185
           AV+  G F   +HAA                 I  ++G G           ++    Y  
Sbjct: 121 AVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQG--------SVGQGNYSA 172

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIA 227
           +K GI  L    AAELGRYG+ V+            AIA  A
Sbjct: 173 AKAGIAALTLVAAAELGRYGVTVN------------AIAPAA 202

Length = 286

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 7e-19
 Identities = 54/192 (28%), Positives = 77/192 (40%), Gaps = 16/192 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ-DVCYIHC 80
            LQG+V  ITGG  G+G + A      GA+V +       L Q L         +  I  
Sbjct: 4   SLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGI-- 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+ + +     VD    +FG+LD LVN      +    +I D      +R+  VN     
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWG---TIADGDADTWDRMYGVNVKTTL 118

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAA 199
             +K A   +     G I+   G G         L   P    Y  +K G+  L ++LAA
Sbjct: 119 NASKAALPALTASGGGRIV-NIGAGA-------ALKAGPGMGAYAAAKAGVARLTEALAA 170

Query: 200 ELGRYGIRVDCV 211
           EL   GI V+ V
Sbjct: 171 ELLDRGITVNAV 182

Length = 239

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 82.4 bits (204), Expect = 1e-18
 Identities = 66/259 (25%), Positives = 104/259 (40%), Gaps = 49/259 (18%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG----QALADKLGHQDVCYIHCDV 82
           +VAI+T   SGIG + A L  + G  + I    D  G           G         D+
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHG-VRAEIRQLDL 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           S+  E    +D  + + G++D+LVN +G   +       LD    +  ++  V+  G FL
Sbjct: 62  SDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK----APFLDMDFDEWRKIFTVDVDGAFL 117

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            ++ AAR MV + +G      G      +  E      A+ Y  +K  + GL K++A EL
Sbjct: 118 CSQIAARHMVKQGQG------GRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALEL 171

Query: 202 GRYGIRVDCVSHTYGLAMAEAIASIAN--------------------------AALYNMA 235
             +GI V+ V+         AIA+  N                          A+L    
Sbjct: 172 VEHGILVNAVA-------PGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWL 224

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             +  SY   Q+L+V+GGF
Sbjct: 225 CSEGASYTTGQSLIVDGGF 243

Length = 256

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 81.9 bits (203), Expect = 1e-18
 Identities = 58/182 (31%), Positives = 84/182 (46%), Gaps = 11/182 (6%)

Query: 31  ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVIN 90
           ITG ASGIG + A LF   G +V   D+ +    ALA +LG  +      DV++      
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDA 65

Query: 91  -LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARV 149
            L D   A  G+LD+L N+   L    F  I   P    +R++ +N + G L   HAA  
Sbjct: 66  ALADFAAATGGRLDVLFNNAGILRGGPFEDI---PLEAHDRVIDIN-VKGVLNGAHAALP 121

Query: 150 MVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVD 209
            +    G  +  T +     + I G   + A  Y  +KF + GL ++L  E  R+GIRV 
Sbjct: 122 YLKATPGARVINTSS----ASAIYGQPGL-AV-YSATKFAVRGLTEALDLEWRRHGIRVA 175

Query: 210 CV 211
            V
Sbjct: 176 DV 177

Length = 260

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score = 81.9 bits (202), Expect = 1e-18
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 12/190 (6%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
           L+ + AI+TGG  GIG +  + F + GAKV + D+     + +A  +  +  +     CD
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +++   V   V       G +D+LVN   N  +  F     T     ERL+A+N  G   
Sbjct: 61  ITDRDSVDTAVAAAEQALGPVDVLVN---NAGWDKFGPFTKTEPPLWERLIAINLTGALH 117

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           +       MV R  G I+          +  E +       Y   K G++   K++A E 
Sbjct: 118 MHHAVLPGMVERGAGRIVNIASDAARVGSSGEAV-------YAACKGGLVAFSKTMAREH 170

Query: 202 GRYGIRVDCV 211
            R+GI V+ V
Sbjct: 171 ARHGITVNVV 180

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 72/280 (25%), Positives = 116/280 (41%), Gaps = 67/280 (23%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ----------------ALA 67
           L+G+VA ITG A G G + A      GA ++  D+   L                   L 
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD 127
           + LG + +     DV +  EV  +V+  V +FG+LD++V +       G +S   + +  
Sbjct: 61  EALGRKVLAR-KADVRDLAEVRAVVEDGVEQFGRLDVVVANA------GVLSYGRSWELS 113

Query: 128 LER---LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YY 183
            E+   +L +N  G +   K     M+ R  G  +  T +       + GL  +P   +Y
Sbjct: 114 EEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSS-------VAGLKALPGLAHY 166

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL--------AMAEAIAS---------- 225
             +K G++GL K+LA EL  YGIRV+ + H Y +        AM EA             
Sbjct: 167 AAAKHGLVGLTKTLANELAEYGIRVNSI-HPYSVDTPMIAPEAMREAFLKYPEAARAFMP 225

Query: 226 ------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                       +A+A L+     D++ Y+    L V+ G
Sbjct: 226 ALPVSGFVPPEDVADAVLW--LASDESRYITGHQLPVDAG 263

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 80.8 bits (200), Expect = 3e-18
 Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 22/219 (10%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHC 80
           L G++A++TG + GIG + A+L  + GA V+++  + +  QA+AD +   G +    + C
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGK-AEALAC 64

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
            +    ++  L      + G+LDILVN+     Y  F  ILDT     ++ + VN  G F
Sbjct: 65  HIGEMEQIDALFAHIRERHGRLDILVNNAAANPY--FGHILDTDLGAFQKTVDVNIRGYF 122

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLVKSL 197
            ++  A ++M  +  G I+            + G+   P ++   Y ++K  ++ + K+ 
Sbjct: 123 FMSVEAGKLMKEQGGGSIVNV--------ASVNGV--SPGDFQGIYSITKAAVISMTKAF 172

Query: 198 AAELGRYGIRVDCVSHTYGLAMAE-AIASIANAALYNMA 235
           A E   +GIRV+ +    GL   + A A   N A+   A
Sbjct: 173 AKECAPFGIRVNAL--LPGLTDTKFASALFKNDAILKQA 209

Length = 252

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score = 81.4 bits (201), Expect = 3e-18
 Identities = 48/202 (23%), Positives = 87/202 (43%), Gaps = 20/202 (9%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL--GHQDVCYIHCD 81
           L+ +VA+ITGG   +G + A+   + GAKV         G  +A ++         +  D
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVN-SGCN----------LEYRGFVSILDTPKSDLER 130
           V +   +    +  VA+FG +DIL+N +G N           E     +  D  +   E 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
           +  +N  G FL ++   + M+ ++ G I+       ++      L  +PA  Y  +K  +
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSII-----NISSMNAFSPLTKVPA--YSAAKAAV 175

Query: 191 LGLVKSLAAELGRYGIRVDCVS 212
               + LA E    G+RV+ ++
Sbjct: 176 SNFTQWLAVEFATTGVRVNAIA 197

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 80.9 bits (200), Expect = 3e-18
 Identities = 66/260 (25%), Positives = 113/260 (43%), Gaps = 45/260 (17%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYI 78
           L G+VA++TG A G+G   A+     GA V++     A ++  +    A     + + + 
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAF- 67

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D+++E  V        A+ G+LDILVN   N+  R    + +   + +  LL  + + 
Sbjct: 68  --DIADEEAVAAAFARIDAEHGRLDILVN---NVGARDRRPLAELDDAAIRALLETDLVA 122

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSL 197
             L+++ AA+ M  +  G I+        A T I G      +  Y  +K G+ GL+++L
Sbjct: 123 PILLSRLAAQRMKRQGYGRII--------AITSIAGQVARAGDAVYPAAKQGLTGLMRAL 174

Query: 198 AAELGRYGIRVDCVSHTYGL-----------AMAEAIAS------------IANAALYNM 234
           AAE G +GI  + ++  Y             A+   +A             IA AA++  
Sbjct: 175 AAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVF-- 232

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
                 SYV    L V+GG+
Sbjct: 233 LASPAASYVNGHVLAVDGGY 252

Length = 256

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 36/193 (18%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
            +  +ITG ASGIG + A+ F   GA+V   D QD             +  ++  D+S++
Sbjct: 5   TKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDD 57

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
                 ++        +DIL N+   L+   +  +LDT   + + +   N    FL+ + 
Sbjct: 58  ------LEPLFDWVPSVDILCNTAGILD--DYKPLLDTSLEEWQHIFDTNLTSTFLLTRA 109

Query: 146 AARVMVPRRRGCIL-------YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
               M+ R+ G I+       +  G G  A              Y  SK  + G  K LA
Sbjct: 110 YLPQMLERKSGIIINMCSIASFVAGGGGAA--------------YTASKHALAGFTKQLA 155

Query: 199 AELGRYGIRVDCV 211
            +  + GI+V  +
Sbjct: 156 LDYAKDGIQVFGI 168

Length = 235

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 81.2 bits (201), Expect = 3e-18
 Identities = 61/207 (29%), Positives = 92/207 (44%), Gaps = 40/207 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQ--DVCYIH 79
              G+VA+ITG ASG G + A++    G K+V+ADVQ D L +A+A+ L  Q  +V  + 
Sbjct: 3   DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAE-LRAQGAEVLGVR 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVN-----SGCNLEYRGFVSILDTPKSDLERLLAV 134
            DVS+  +V  L D  + +FG + +L N     +G      G   + +   +D E +L V
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG------GL--VWENSLADWEWVLGV 113

Query: 135 NTIGGFLVAKHAARVMVPR----------RRGCILYTTGTGTTACTEIEGLCNIPA-NYY 183
           N  G      H  R   P             G I+ T          + GL   PA   Y
Sbjct: 114 NLWGVI----HGVRAFTPLMLAAAEKDPAYEGHIVNT--------ASMAGLLAPPAMGIY 161

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDC 210
            VSK  ++ L ++L  +L     +V  
Sbjct: 162 NVSKHAVVSLTETLYQDLSLVTDQVGA 188

Length = 287

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 79.2 bits (196), Expect = 1e-17
 Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 30/199 (15%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ---DVCYIHC 80
             +VA+ITGGA  IGA+ A+  H  G +V I          ALA +L          +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+ +   +  LV   VA FG+LD LVN+  +  Y   +  +   + D   L A N    F
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNASSF-YPTPLGSITEAQWD--DLFASNLKAPF 121

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-----NY--YGVSKFGILGL 193
            ++  AA   + ++RG I+               + +I A      Y  Y  +K  +  L
Sbjct: 122 FLS-QAAAPQLRKQRGAIV--------------NITDIHAERPLKGYPVYCAAKAALEML 166

Query: 194 VKSLAAELGRYGIRVDCVS 212
            +SLA EL    +RV+ V+
Sbjct: 167 TRSLALELAP-EVRVNAVA 184

Length = 249

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 78.5 bits (193), Expect = 2e-17
 Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 37/204 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLGHQ--DVCYIH 79
           +L G+VAI+TGGA GIG +      + GAKVVI  +      + L ++LG +  DV  + 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DVS   +   LV+  V  FGK+DILVN+      R F  +    + D ER++ VN    
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRDRTFKKL---NREDWERVIDVNL--- 116

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG--LCNIPA----------NYYGVSK 187
                             +  TT       TE E   + +I +            Y  +K
Sbjct: 117 ----------------SSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK 160

Query: 188 FGILGLVKSLAAELGRYGIRVDCV 211
            G+LG  KSLA EL +  + V+ +
Sbjct: 161 AGMLGFTKSLALELAKTNVTVNAI 184

Length = 247

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 78.4 bits (193), Expect = 2e-17
 Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 38/255 (14%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
           + L GR A++TG + GIG   A+L H  GA V +   +    +ALA +LG + V     +
Sbjct: 2   FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGER-VKIFPAN 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +S+  EV  L     A    +DILVN+    +   FV + D    D + +L VN    F 
Sbjct: 61  LSDRDEVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSD---EDWDSVLEVNLTATFR 117

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAA 199
           + +     M+ RR G I+          T + G+   P  ANY   SK G++G  KSLA 
Sbjct: 118 LTRELTHPMMRRRYGRII--------NITSVVGVTGNPGQANYCA-SKAGMIGFSKSLAQ 168

Query: 200 ELGRYGIRVDCVSHTY-GLAMA--------EAI------------ASIANAALYNMAKDD 238
           E+    + V+CV+  +   AM         EAI            A +A+A  Y      
Sbjct: 169 EIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAY--LASS 226

Query: 239 DTSYVGKQNLLVNGG 253
           + +YV  Q + VNGG
Sbjct: 227 EAAYVTGQTIHVNGG 241

Length = 245

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 2e-17
 Identities = 77/262 (29%), Positives = 111/262 (42%), Gaps = 50/262 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCD 81
           RLQG+ A+ITGG SGIG   A+ F   GA+V I      +L  A A+ LG      I  D
Sbjct: 3   RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAE-LGE-SALVIRAD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDIL-VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG- 139
             +      L       FG+LD + +N+G       F  + D  ++  +R    N  G  
Sbjct: 61  AGDVAAQKALAQALAEAFGRLDAVFINAGVAK----FAPLEDWDEAMFDRSFNTNVKGPY 116

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLA 198
           FL+     + ++P      L            I     +P ++ Y  SK  +L L K+L+
Sbjct: 117 FLI-----QALLP------LLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLS 165

Query: 199 AELGRYGIRVDCVS----HT--YGL---------AMAEAIAS------------IANAAL 231
            EL   GIRV+ VS     T  YG          A+A  I +            IA A L
Sbjct: 166 GELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVL 225

Query: 232 YNMAKDDDTSYVGKQNLLVNGG 253
           Y +A D+    VG + ++V+GG
Sbjct: 226 Y-LASDESAFIVGSE-IIVDGG 245

Length = 249

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 78.4 bits (193), Expect = 2e-17
 Identities = 69/198 (34%), Positives = 94/198 (47%), Gaps = 33/198 (16%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
           GRVA++TG A GIG   A      G +VV+AD+    G  +A  LG ++  +I  DV++E
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG-ENAWFIAMDVADE 68

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE--------RLLAVNTI 137
            +V   V   + +FG+LD LV   CN       +I D   + LE        R+LAVN  
Sbjct: 69  AQVAAGVAEVLGQFGRLDALV---CN------AAIADPHNTTLESLSLAHWNRVLAVNLT 119

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGT---GTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           G  L+AKH A  +     G I+    T    +   TE           Y  SK G+L L 
Sbjct: 120 GPMLLAKHCAPYLRA-HNGAIVNLASTRARQSEPDTEA----------YAASKGGLLALT 168

Query: 195 KSLAAELGRYGIRVDCVS 212
            +LA  LG   IRV+ VS
Sbjct: 169 HALAISLGP-EIRVNAVS 185

Length = 255

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score = 78.5 bits (194), Expect = 3e-17
 Identities = 56/201 (27%), Positives = 90/201 (44%), Gaps = 35/201 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHC-- 80
            L+ +V I+TGGASGIGA+ +    + GA  VI   +       A++L            
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFG-RSAPDDEFAEELRALQPRAEFVQV 62

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           D++++ +  + V+ TVAKFG++D LV N+G N +  G    L+  +      L  N I  
Sbjct: 63  DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVN-DGVG----LEAGREAFVASLERNLIHY 117

Query: 140 FLVAKHAARVMVP---RRRGCIL------YTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
           +++A +     +P     RG I+        TG G T+              Y  +K   
Sbjct: 118 YVMAHYC----LPHLKASRGAIVNISSKTALTGQGGTSG-------------YAAAKGAQ 160

Query: 191 LGLVKSLAAELGRYGIRVDCV 211
           L L +  A  L + G+RV+ V
Sbjct: 161 LALTREWAVALAKDGVRVNAV 181

Length = 258

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 78.4 bits (194), Expect = 3e-17
 Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 23/206 (11%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DV 75
           + + + L+G+VA+ITGG   +G + A+   + GAKV I D      +A+  ++     + 
Sbjct: 2   MPNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEA 61

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCN-----------LEYRGFVSILDT 123
             +  DV ++  +       +  FG  DIL+N +G N                  +  D 
Sbjct: 62  LAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDL 121

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-YTTGTGTTACTEIEGLCNIPANY 182
            +   E +  +N +G  L  +  A+ MV R+ G I+  ++    T  T++          
Sbjct: 122 DEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPA-------- 173

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRV 208
           Y  +K  I    + LA    + GIRV
Sbjct: 174 YSAAKAAISNFTQWLAVHFAKVGIRV 199

Length = 278

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 4e-17
 Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 24/196 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYIHCD 81
           +V +ITG + GIG + A L    G  V I     A   +    A+    G    C +  D
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGR--ACVVAGD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS----ILDTPKSDLERLLAVNTI 137
           V+NE +VI + D   + FG+LD LVN+       G V+    + D   + L R+   N +
Sbjct: 61  VANEADVIAMFDAVQSAFGRLDALVNNA------GIVAPSMPLADMDAARLRRMFDTNVL 114

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILGLVK 195
           G +L A+ AAR +   R G      G      + I      P  Y  Y  SK  +  L  
Sbjct: 115 GAYLCAREAARRLSTDRGG-----RGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTL 169

Query: 196 SLAAELGRYGIRVDCV 211
            LA ELG +G+RV+ V
Sbjct: 170 GLAKELGPHGVRVNAV 185

Length = 248

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 4e-17
 Identities = 56/191 (29%), Positives = 90/191 (47%), Gaps = 12/191 (6%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYI--HCDVS 83
           +V IITG + GIGA+ A L  + G  V +  +++ +  +A+   +  Q    +    DV+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +E +V+ L +    + G+LD LVN+   LE +  +  +D  +  L R+ A N +G FL A
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAAR--LTRIFATNVVGSFLCA 120

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILGLVKSLAAEL 201
           + A + M  R  G      G      + +      P  Y  Y  SK  I  +   LA E+
Sbjct: 121 REAVKRMSTRHGGR-----GGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEV 175

Query: 202 GRYGIRVDCVS 212
              GIRV+ V 
Sbjct: 176 AAEGIRVNAVR 186

Length = 248

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 64/205 (31%), Positives = 89/205 (43%), Gaps = 38/205 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+G VA+ITGG SG+G +  + F   GAKV + D        L    G   V  +  DV
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVLDRSAEKVAELRADFG-DAVVGVEGDV 59

Query: 83  ----SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDL----ERLLAV 134
                NER     V   V +FGKLD  + +    +Y    S++D P+  L    + L  +
Sbjct: 60  RSLADNER----AVARCVERFGKLDCFIGNAGIWDY--STSLVDIPEEKLDEAFDELFHI 113

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTT-------GTGTTACTEIEGLCNIPANYYGVSK 187
           N  G  L AK A   +     G +++T        G G        G        Y  SK
Sbjct: 114 NVKGYILGAKAALPALY-ATEGSVIFTVSNAGFYPGGG--------GPL------YTASK 158

Query: 188 FGILGLVKSLAAELGRYGIRVDCVS 212
             ++GLVK LA EL  + IRV+ V+
Sbjct: 159 HAVVGLVKQLAYELAPH-IRVNGVA 182

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 75.2 bits (185), Expect = 4e-16
 Identities = 58/196 (29%), Positives = 101/196 (51%), Gaps = 8/196 (4%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQ-DVCYIHCD 81
           L+G+VA++TG +SG+GA  AQ+  + GAKVV+A  + + L +  A+          +  D
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLD 66

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           V++ + +   V     + G +DILV NSG +   +    ++D   +D + +   NT G F
Sbjct: 67  VTDYQSIKAAVAHAETEAGTIDILVNNSGVSTTQK----LVDVTPADFDFVFDTNTRGAF 122

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAA 199
            VA+  A+ M+ R +G      G        + GL  +P    Y +SK  ++ + +++A 
Sbjct: 123 FVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMAL 182

Query: 200 ELGRYGIRVDCVSHTY 215
           E GR+GI V+ +   Y
Sbjct: 183 EWGRHGINVNAICPGY 198

Length = 258

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 74.3 bits (183), Expect = 5e-16
 Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 14/178 (7%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVS 83
           +V +ITG +SGIG + A  F + GAKVV+A         LA ++   G + +  +  DV+
Sbjct: 1   QVVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVV-ADVA 59

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  +V    DT V +FG++D  VN   N     F    D    +  R+  VN +G     
Sbjct: 60  DAAQVERAADTAVERFGRIDTWVN---NAGVAVFGRFEDVTPEEFRRVFDVNYLGHVYGT 116

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
             A   +  R  G ++            ++         Y  SK  + G  +SL AEL
Sbjct: 117 LAALPHLRRRGGGALINVGSLLGYRSAPLQAA-------YSASKHAVRGFTESLRAEL 167

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 75.0 bits (185), Expect = 6e-16
 Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYIHCD 81
           G+V +ITG  SGIG   A+   K GA V+IA   +  G+  A ++    G+  V  I  D
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEVIQLD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           +S+   V    +  +A+F +LDIL+ N+G     R         K   E   AVN +G F
Sbjct: 61  LSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRR------LTKDGFELQFAVNYLGHF 114

Query: 141 L 141
           L
Sbjct: 115 L 115

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 9e-16
 Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 34/195 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQ--DVCYIHCDVS 83
             A+ITG +SGIG + A  F K G  +  +A  QD L +ALA +L            D+S
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDAL-EALAAELRSTGVKAAAYSIDLS 65

Query: 84  NEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           N   +   +   + +FG  D+L+N+ G    Y G   +L+ P SD + ++ +N    F  
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGM--AYTG--PLLEMPLSDWQWVIQLNLTSVFQC 121

Query: 143 AKHAARVMVP--RRRGCILYTTGTGTTACTEIEGLCNIPAN-------YYGVSKFGILGL 193
                  ++P  R RG        G      I  + +I A         Y VSK  +   
Sbjct: 122 C----SAVLPGMRARGG-------GL-----IINVSSIAARNAFPQWGAYCVSKAALAAF 165

Query: 194 VKSLAAELGRYGIRV 208
            K LA E   +GIRV
Sbjct: 166 TKCLAEEERSHGIRV 180

Length = 241

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score = 74.1 bits (182), Expect = 1e-15
 Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 29/214 (13%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD----VCYIH 79
            Q R  ++TGG SGIG   A      GA V+I     +   A A+++        V Y  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV++E +V   VD   A  G+L  +V+     E  G ++ +D+      R + +N  G 
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDS--DAWRRTVDLNVNGT 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-------YYGVSKFGILG 192
             V KHAAR +V   RG      G G+       G+ +I A+        YGV+K  +  
Sbjct: 123 MYVLKHAARELV---RG------GGGS-----FVGISSIAASNTHRWFGAYGVTKSAVDH 168

Query: 193 LVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASI 226
           L+K  A ELG   +RV+ +    GL   + +A I
Sbjct: 169 LMKLAADELGPSWVRVNSIRP--GLIRTDLVAPI 200

Length = 276

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 73.6 bits (181), Expect = 1e-15
 Identities = 67/278 (24%), Positives = 108/278 (38%), Gaps = 67/278 (24%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI----ADVQDNLGQALADKLGHQ 73
               +RL G+ A+ITG + GIG + A+ F   GA V+I    AD        LA++   +
Sbjct: 1   TQHRWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPER 60

Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNL----------EYRGFVSILD 122
           +V  +  DVS++ +   ++D     +  L ILVN+ G N+          E+RG      
Sbjct: 61  EVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNL 120

Query: 123 TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY 182
               +L R          L+ +HA+  +V       L    +G                 
Sbjct: 121 FSAFELSRYAHP------LLKQHASSAIVNIGSVSGLTHVRSGAP--------------- 159

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY--------------------------G 216
           YG++K  +L + ++LA E    GIRV+ V+  Y                           
Sbjct: 160 YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRR 219

Query: 217 LAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           +   E +A+    A   M      SY+  Q + V+GGF
Sbjct: 220 VGEPEEVAAA--VAFLCM---PAASYITGQCIAVDGGF 252

Length = 257

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.6 bits (181), Expect = 2e-15
 Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 61/270 (22%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQDVCYIHCD 81
           ++  +  ++TGG+ G+GA+ A+ F + GA+VV+   Q ++  +ALAD+LG + +  +  D
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIA-LQAD 60

Query: 82  VSNEREVINLVDTTVAKFGK-LDILVNSGCNLEYRGFVSILDTPKS-------DLERLLA 133
           V++  +V  +  T    FGK +  +VN+        F    D  K        D ++ L 
Sbjct: 61  VTDREQVQAMFATATEHFGKPITTVVNNA----LADFSFDGDARKKADDITWEDFQQQLE 116

Query: 134 VNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN------IPANYYGVSK 187
            +  G     + A   M  +  G I+     GT          N      +P + Y  +K
Sbjct: 117 GSVKGALNTIQAALPGMREQGFGRII---NIGT----------NLFQNPVVPYHDYTTAK 163

Query: 188 FGILGLVKSLAAELGRYGIRVDCVSHTYGL------------AMAEAIAS---------- 225
             +LGL ++LAAELG YGI V+ VS   GL             + + IA+          
Sbjct: 164 AALLGLTRNLAAELGPYGITVNMVSG--GLLRTTDASAATPDEVFDLIAATTPLRKVTTP 221

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
              A+A L+  A     +  G QNL+V+GG
Sbjct: 222 QEFADAVLF-FASPWARAVTG-QNLVVDGG 249

Length = 253

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 2e-15
 Identities = 63/244 (25%), Positives = 95/244 (38%), Gaps = 62/244 (25%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-------------------DVQDNLGQ 64
           L G+   ITG + GIG + A    ++GA +VIA                   +++   GQ
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 65  ALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN--SGCNLEYRGFVSILD 122
           AL           +  DV +E +V   V   V +FG +DI VN  S  NL         D
Sbjct: 64  ALP----------LVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLT-----GTED 108

Query: 123 TP--KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA---CTEIEGLCN 177
           TP  + DL  +  +N  G FLV++     +       IL      T +     + +    
Sbjct: 109 TPMKRFDL--MQQINVRGTFLVSQACLPHLKKSENPHIL------TLSPPLNLDPKWFAP 160

Query: 178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV-SHTYGLAMAEAIASIANAALYNMAK 236
             A  Y ++K+G+      LA E    GI V+ +   T           IA AA+ N+  
Sbjct: 161 HTA--YTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTT----------IATAAVRNLLG 208

Query: 237 DDDT 240
            D+ 
Sbjct: 209 GDEA 212

Length = 273

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 73.5 bits (181), Expect = 2e-15
 Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 19/192 (9%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD--NLGQALADKLGH-QDVCYIHCDVS 83
            VA++TGG  GIG   A+     G  + I D  D   L     +      +V +   DV+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +      ++D   A +G++D LV N+G  ++ RG   +LD      +R+LA+N  G F +
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRG--DLLDLTPESFDRVLAINLRGPFFL 120

Query: 143 AKHAARVMVPRRR------GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
            +  A+ M+ +          I++ +       +            Y +SK G+    + 
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS-------PNRGEYCISKAGLSMAAQL 173

Query: 197 LAAELGRYGIRV 208
            AA L   GI V
Sbjct: 174 FAARLAEEGIGV 185

Length = 256

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 73.1 bits (180), Expect = 2e-15
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 16/185 (8%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHC---DVSN 84
            +ITG +SGIG + A+ F K GAK+++     + L Q LAD+LG +    +     DVS+
Sbjct: 3   VLITGASSGIGEATARRFAKAGAKLILTGRRAERL-QELADELGAKFPVKVLPLQLDVSD 61

Query: 85  EREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
              +   ++    +F  +DILV N+G  L   G     +    D E ++  N  G   V 
Sbjct: 62  RESIEAALENLPEEFRDIDILVNNAGLAL---GLDPAQEADLEDWETMIDTNVKGLLNVT 118

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           +    +M+ R +G I+     G+ A        N+    Y  +K  +     +L  +L  
Sbjct: 119 RLILPIMIARNQGHII---NLGSIAGRYPYAGGNV----YCATKAAVRQFSLNLRKDLIG 171

Query: 204 YGIRV 208
            GIRV
Sbjct: 172 TGIRV 176

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 74.6 bits (184), Expect = 3e-15
 Identities = 58/198 (29%), Positives = 81/198 (40%), Gaps = 31/198 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-----LADKLGHQDVCY 77
              G++ ++TG  SGIG   A  F + GA+VV +D+  +   A     L    G     Y
Sbjct: 312 PFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDI--DEAAAERTAELIRAAGAVAHAY 369

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVN------SGCNLEYRGFVSILDTPKSDLERL 131
              DVS+   +    +   A+ G  DI+VN      +G           LDT   D +R+
Sbjct: 370 -RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAG---------GFLDTSAEDWDRV 419

Query: 132 LAVNTIGGFLVAKHA-ARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
           L VN + G +       R MV R  G  +    +   A      L   PA  Y  SK  +
Sbjct: 420 LDVN-LWGVIHGCRLFGRQMVERGTGGHIVNVASA-AAYAPSRSL---PA--YATSKAAV 472

Query: 191 LGLVKSLAAELGRYGIRV 208
           L L + L AEL   GI V
Sbjct: 473 LMLSECLRAELAAAGIGV 490

Length = 582

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 72.6 bits (178), Expect = 3e-15
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 12/191 (6%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH-CD 81
           R +G+V ++TG A GIG   A+     GA+V++ D  + + + LA+ L   D  ++H  D
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAEILAAGDAAHVHTAD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +        +V   V +FG++D+L+N+     +          +  +E  +  +      
Sbjct: 61  LETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYE--HYEEEQIEAEIRRSLFPTLW 118

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
             +     M+ R++G I+  +   T       G+  IP   Y  +K G+  L  SLA E 
Sbjct: 119 CCRAVLPHMLERQQGVIVNVSSIAT------RGIYRIP---YSAAKGGVNALTASLAFEH 169

Query: 202 GRYGIRVDCVS 212
            R GIRV+ V+
Sbjct: 170 ARDGIRVNAVA 180

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 73.0 bits (179), Expect = 4e-15
 Identities = 55/197 (27%), Positives = 82/197 (41%), Gaps = 21/197 (10%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------ADVQDNLGQALADKLGHQDV 75
           RLQGR A+ITG  SGIG + A  F + GA + +        D  + +   L    G + V
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVV--QLIQAEGRKAV 109

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
             +  D+ +E     LV+  V + G LDILVN            I D      +     N
Sbjct: 110 A-LPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVK--DIADITTEQFDATFKTN 166

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               F + K A   + P   G  +  TG+   +      L +     Y  +K  I+   K
Sbjct: 167 VYAMFWLCKAAIPHLPP---GASIINTGS-IQSYQPSPTLLD-----YASTKAAIVAFTK 217

Query: 196 SLAAELGRYGIRVDCVS 212
           +LA ++   GIRV+ V+
Sbjct: 218 ALAKQVAEKGIRVNAVA 234

Length = 300

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 71.7 bits (176), Expect = 6e-15
 Identities = 55/184 (29%), Positives = 78/184 (42%), Gaps = 15/184 (8%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
            I+TG A GIG + A+   + GA V+  D+   L     D L          DV++   V
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLR-----LTPLDVADAAAV 55

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
             +    +A+ G +D LVN    L       +      D E+  AVN  G F + +  A 
Sbjct: 56  REVCSRLLAEHGPIDALVNCAGVLRPGATDPL---STEDWEQTFAVNVTGVFNLLQAVAP 112

Query: 149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRV 208
            M  RR G I+ T  +       I    ++ A  YG SK  +  L K L  EL  YG+R 
Sbjct: 113 HMKDRRTGAIV-TVASNAAHVPRI----SMAA--YGASKAALASLSKCLGLELAPYGVRC 165

Query: 209 DCVS 212
           + VS
Sbjct: 166 NVVS 169

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 72.3 bits (178), Expect = 6e-15
 Identities = 59/194 (30%), Positives = 86/194 (44%), Gaps = 31/194 (15%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQD----NLGQALADKLGHQDV 75
             +  +ITG +SG G + AQ     G +VV      A   D    +  +ALA        
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALA-------- 54

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
                DV++   +  +V    A FG +D+LVN   N  Y    +I ++P +++ R   VN
Sbjct: 55  --RLLDVTDFDAIDAVVADAEATFGPIDVLVN---NAGYGHEGAIEESPLAEMRRQFEVN 109

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLV 194
             G   + K     M  RRRG I+  T  G        GL  +P   YY  SKF + G+ 
Sbjct: 110 VFGAVAMTKAVLPGMRARRRGHIVNITSMG--------GLITMPGIGYYCGSKFALEGIS 161

Query: 195 KSLAAELGRYGIRV 208
           +SLA E+  +GI V
Sbjct: 162 ESLAKEVAPFGIHV 175

Length = 277

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 71.9 bits (176), Expect = 8e-15
 Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 13/186 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ-DVCYIHCDVS 83
           GR A+ITGGASGIG +    F + GA+VV+ DV +  L QA+        DV  + CDV 
Sbjct: 6   GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVR 65

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  EV +L D      G +D+ V S   +   G   I++    D   ++ V+  G     
Sbjct: 66  HREEVTHLADEAFRLLGHVDV-VFSNAGIVVGG--PIVEMTHDDWRWVIDVDLWGSI--- 119

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLC-NIPANYYGVSKFGILGLVKSLAAELG 202
            H     +PR    +   TG          GL  N     YGV+K+G++GL ++LA E+ 
Sbjct: 120 -HTVEAFLPR---LLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVT 175

Query: 203 RYGIRV 208
             GI V
Sbjct: 176 ADGIGV 181

Length = 275

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 64/238 (26%), Positives = 102/238 (42%), Gaps = 38/238 (15%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA--DVQDNLGQAL--ADKLGHQDVCYIH 79
           L G++A++TG + GIG   A    + GA V I    +   L       +  G + +  + 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIP-VR 59

Query: 80  CDVSNEREVINLVDTTVAKF--GKLDILVNSGCNLEYRGFVSILDTP-----KSDLERLL 132
           CD S++ EV  L +  VA+   G+LDILVN+     Y     IL        +       
Sbjct: 60  CDHSDDDEVEALFE-RVAREQQGRLDILVNNA----YAAVQLILVGVAKPFWEEPPTIWD 114

Query: 133 AVNTIG---GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
            +N +G    +  + +AA +MV   +G I+  + TG      +E L N+    YGV K  
Sbjct: 115 DINNVGLRAHYACSVYAAPLMVKAGKGLIVIISSTGG-----LEYLFNV---AYGVGKAA 166

Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQN 247
           I  +   +A EL  +G+    VS   G    E +          M +DD+ S+  K+ 
Sbjct: 167 IDRMAADMAHELKPHGV--AVVSLWPGFVRTELVL--------EMPEDDEGSWHAKER 214

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 51/194 (26%), Positives = 80/194 (41%), Gaps = 24/194 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVI------ADVQDNLGQALADKLGHQDVCYIHC 80
            VA++TG A  IG + A+     G +VV+      A+ Q  L   L   L +  V  +  
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQR-LKDELN-ALRNSAVL-VQA 57

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV--SILDTPKSDLERLLAVNTIG 138
           D+S+     +LV      FG+ D+LVN+        F    +    +     L  +N   
Sbjct: 58  DLSDFAACADLVAAAFRAFGRCDVLVNNASA-----FYPTPLGQGSEDAWAELFGINLKA 112

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            +L+ +  AR +   R G I+      T        L    A  Y +SK  + GL +S A
Sbjct: 113 PYLLIQAFARRLAGSRNGSIINIIDAMTD-----RPLTGYFA--YCMSKAALEGLTRSAA 165

Query: 199 AELGRYGIRVDCVS 212
            EL    IRV+ ++
Sbjct: 166 LELAPN-IRVNGIA 178

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 23/223 (10%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           +VA++TG + GIG   A+   ++G +V +     N     A      DV  +  D  +  
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSL--GLRNPEDLAALSASGGDVEAVPYDARDPE 58

Query: 87  EVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
           +   LVD    +FG++D+LV N+G         ++ +   ++LE   ++N I    + + 
Sbjct: 59  DARALVDALRDRFGRIDVLVHNAGIGRP----TTLREGSDAELEAHFSINVIAPAELTRA 114

Query: 146 AARVMVPRRRGCILY-TTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLVKSLAAEL 201
               +     G +++  + +G                    Y  SKF +  L  +L  E 
Sbjct: 115 LLPALREAGSGRVVFLNSLSG-----------KRVLAGNAGYSASKFALRALAHALRQEG 163

Query: 202 GRYGIRVDCVSHTY-GLAMAEAIASIANAALYNMAKDDDTSYV 243
             +G+RV  V   +    MA+ +  +       M +  D + +
Sbjct: 164 WDHGVRVSAVCPGFVDTPMAQGLTLVGAFPPEEMIQPKDIANL 206

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 70.6 bits (173), Expect = 2e-14
 Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 12/200 (6%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           ++  + L G+  +ITG A GIG   A    + GA+++I D+     +    KL  + +  
Sbjct: 1   MNDLFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKA 60

Query: 78  IHC--DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
                +V++++EV   ++      G +D+L+N+        F    + P+ +   ++AVN
Sbjct: 61  HAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHPF---TEFPEQEWNDVIAVN 117

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               FLV++  AR MV R+ G I+         C+    L       Y  SK  +  L +
Sbjct: 118 QTAVFLVSQAVARYMVKRQAGKII-------NICSMQSELGRDTITPYAASKGAVKMLTR 170

Query: 196 SLAAELGRYGIRVDCVSHTY 215
            +  EL R+ I+V+ ++  Y
Sbjct: 171 GMCVELARHNIQVNGIAPGY 190

Length = 254

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score = 70.1 bits (172), Expect = 2e-14
 Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 11/186 (5%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVS 83
            +VA++TG   GIG + A+   ++G KV I D  +   QA ADKL         +  DVS
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  +V   V   V  FG L+++VN   N        I    +   +++  +N +GG +  
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVN---NAGVAPTTPIETITEEQFDKVYNIN-VGGVIWG 117

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
             AA     ++ G      G    A ++   + N     Y  +KF + GL ++ A +L  
Sbjct: 118 IQAA-QEAFKKLG----HGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLAS 172

Query: 204 YGIRVD 209
            GI V+
Sbjct: 173 EGITVN 178

Length = 256

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 70.3 bits (173), Expect = 3e-14
 Identities = 62/216 (28%), Positives = 99/216 (45%), Gaps = 30/216 (13%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQ---ALADKLGHQDVCYI 78
           L+G+  +I G A+   I    A+   + GA++      + L +    LA++LG   V  +
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLV--L 61

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNL---EYRGFVSILDTPKSDLERLLAVN 135
            CDV+N+  +  L  T   K+GKLD LV+S       E +G    LDT +      + ++
Sbjct: 62  PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKG--DYLDTSREGFLIAMDIS 119

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLV 194
                 +AK A  +M     G IL  T  G+           +P  N  GV+K  +   V
Sbjct: 120 AYSFTALAKAARPLM--NNGGSILTLTYLGSERV--------VPNYNVMGVAKAALEASV 169

Query: 195 KSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAA 230
           + LAA+LG+ GIRV+ +S       A  I ++A + 
Sbjct: 170 RYLAADLGKEGIRVNAIS-------AGPIRTLAASG 198

Length = 259

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 69.4 bits (170), Expect = 3e-14
 Identities = 56/182 (30%), Positives = 86/182 (47%), Gaps = 11/182 (6%)

Query: 31  ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVIN 90
           ITG ASGIG   A LF +NG  V + D+ ++   ALA +LG ++V     DV++      
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLYDIDEDGLAALAAELGAENVVAGALDVTDRAAWAA 64

Query: 91  -LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARV 149
            L D   A  G+LD L N+        F  +   P +  +R++ +N   G L   +AA  
Sbjct: 65  ALADFAAATGGRLDALFNNAGVGRGGPFEDV---PLAAHDRMVDINVK-GVLNGAYAALP 120

Query: 150 MVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVD 209
            +    G  +      T + + I G  ++    Y  +KF + GL ++L  E  R+GIRV 
Sbjct: 121 YLKATPGARVIN----TASSSAIYGQPDLAV--YSATKFAVRGLTEALDVEWARHGIRVA 174

Query: 210 CV 211
            V
Sbjct: 175 DV 176

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 69.7 bits (171), Expect = 4e-14
 Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 36/203 (17%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQA---LADKLGHQDVCYIH 79
           L+GRVA++TGG+SGIG +  +L  + GA V I    ++ L  A   L +K     +    
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL-DTPKSD------LERLL 132
           CDV +E +V        A+FG +D+LVN+      +G VS   DT          L+   
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAG----QGRVSTFADTTDDAWRDELELKYFS 121

Query: 133 AVNTIGGFL----VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKF 188
            +N    FL     +  A+ V V      +L          T               ++ 
Sbjct: 122 VINPTRAFLPLLRASAAASIVCV----NSLLALQPEPHMVATS-------------AARA 164

Query: 189 GILGLVKSLAAELGRYGIRVDCV 211
           G+L LVKSLA EL   G+RV+ +
Sbjct: 165 GLLNLVKSLATELAPKGVRVNSI 187

Length = 265

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 16/191 (8%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL--GQALADKLGHQ--DVCYIHCD 81
           G+VA++TG  SGIG   A+     GA +V+    D        A         V Y   D
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +S    + ++V     +FG +DILVN   N   +    I D P    + ++A+N    F 
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVN---NAGIQHVAPIEDFPTEKWDAIIALNLSAVFH 118

Query: 142 VAKHAARVMVPRRRGCILYTTGT-GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
             + A   M  +  G I+      G  A        N  A  Y  +K G++GL K +A E
Sbjct: 119 TTRLALPHMKKQGWGRIINIASVHGLVASA------NKSA--YVAAKHGVVGLTKVVALE 170

Query: 201 LGRYGIRVDCV 211
               G+  + +
Sbjct: 171 TAGTGVTCNAI 181

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score = 68.6 bits (168), Expect = 9e-14
 Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 21/193 (10%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD----NLGQALADKLGHQDVCYIHCDV 82
            VAI+TG + GIG + A      G  + I D+ D        A     G + + +   D+
Sbjct: 2   PVAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYF-QADI 60

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
               +   L+D     FG+LD LV N+G  +  RG   +LD  +   +RL+A+N  G F 
Sbjct: 61  GELSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRG--DLLDLTEDSFDRLIAINLRGPFF 118

Query: 142 VAKHAARVMVPRRR------GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
           + +  AR MV +          I++ T       +   G        Y +SK G+    +
Sbjct: 119 LTQAVARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRG-------EYCISKAGLSMATR 171

Query: 196 SLAAELGRYGIRV 208
            LA  L   GI V
Sbjct: 172 LLAYRLADEGIAV 184

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 69.0 bits (169), Expect = 1e-13
 Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 13/190 (6%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQDVCYIH-- 79
            L G+  ++TG +SGIG +AA+ F + GA VV +A  +D L  A+AD++  +        
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLL-DAVADRI-TRAGGDAMAV 94

Query: 80  -CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CD+S+   V  LV     + G +DIL+N+      R     LD    D+ER + +N   
Sbjct: 95  PCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIRRPLAESLDR-WHDVERTMVLNYYA 153

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
              + +  A  M+ R  G I+     G    +E   L ++    Y  SK  +  + + + 
Sbjct: 154 PLRLIRGLAPGMLERGDGHIINVATWGVL--SEASPLFSV----YNASKAALSAVSRVIE 207

Query: 199 AELGRYGIRV 208
            E G  G+  
Sbjct: 208 TEWGDRGVHS 217

Length = 293

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 50/184 (27%), Positives = 75/184 (40%), Gaps = 12/184 (6%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKL-GHQDVCYIHCDVSNE- 85
            +ITG + GIG    +     G   VIA  +D      LA     H  +  +  DV++E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
            E    V         LD+L+N+   L   G  S  +    DL  +  VN +G  L+ + 
Sbjct: 61  AESAEAV-AERLGDAGLDVLINNAGILHSYGPAS--EVDSEDLLEVFQVNVLGPLLLTQA 117

Query: 146 AARVMVPRRRGCILY-TTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
              +++   R  I+  ++  G+       G  +     Y  SK  +  L KSLA EL R 
Sbjct: 118 FLPLLLKGARAKIINISSRVGSIGDNTSGGWYS-----YRASKAALNMLTKSLAVELKRD 172

Query: 205 GIRV 208
           GI V
Sbjct: 173 GITV 176

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 68.3 bits (167), Expect = 1e-13
 Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 23/201 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKL---GHQDVCYI 78
           R +GRVA++TG + GIGA+ A+   ++G KVV  A   D + +ALA +    G+  +   
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKI-EALAAECQSAGYPTLFPY 61

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CD+SNE +++++      +   +D+ +N+   L       +L       + +  VN + 
Sbjct: 62  QCDLSNEEQILSMFSAIRTQHQGVDVCINNA-GLARPEP--LLSGKTEGWKEMFDVNVLA 118

Query: 139 GFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLCNIPANY---YGVSKFGILGL 193
             +  + A + M  R    G I+              G    P +    Y  +K  +  L
Sbjct: 119 LSICTREAYQSMKERNVDDGHIININSMS--------GHRVPPVSVFHFYAATKHAVTAL 170

Query: 194 VKSLAAEL--GRYGIRVDCVS 212
            + L  EL   +  IR   +S
Sbjct: 171 TEGLRQELREAKTHIRATSIS 191

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 28/197 (14%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN 84
             +VA++TG +SGIG + A+   + G +V          +  A       V  +  DV++
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF------GTSRNPARAAPIPGVELLELDVTD 56

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE---RLLAVNTIGGFL 141
           +  V   VD  +A+ G++D+LVN+       G        +S +     L   N  G   
Sbjct: 57  DASVQAAVDEVIARAGRIDVLVNNA------GVGLAGAAEESSIAQAQALFDTNVFGILR 110

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLVKSLA 198
           + +     M  +  G I+          + + G   +PA Y   Y  SK  + G  +SL 
Sbjct: 111 MTRAVLPHMRAQGSGRIINI--------SSVLGF--LPAPYMALYAASKHAVEGYSESLD 160

Query: 199 AELGRYGIRVDCVSHTY 215
            E+ ++GIRV  V   Y
Sbjct: 161 HEVRQFGIRVSLVEPAY 177

Length = 270

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 56/194 (28%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 26  GRVAIITGGAS--GIGASAAQLFHKNGAKVVI---ADVQDNLGQALADKLGHQDVCYIHC 80
           G+  +ITG A+   I    A+  H+ GA++      +      + LA++LG   +    C
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVL-PC 59

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVSN+ E+  L       +GKLD LV+S     + +     LDT +    + L ++    
Sbjct: 60  DVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSL 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLA 198
             +AK A  +M     G I+  +  G+           +P  N  GV+K  +   V+ LA
Sbjct: 120 VSLAKAALPIM--NPGGSIVTLSYLGSERV--------VPGYNVMGVAKAALESSVRYLA 169

Query: 199 AELGRYGIRVDCVS 212
            ELGR GIRV+ +S
Sbjct: 170 YELGRKGIRVNAIS 183

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 67.4 bits (165), Expect = 2e-13
 Identities = 54/189 (28%), Positives = 82/189 (43%), Gaps = 15/189 (7%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKL----GHQDVCYIHCDVS 83
           A ITG A G+G + A+   + GAKV + D+ D  G  A A ++    G         DV+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +E +   L+       G L +LVN   N     F +I      +  R++A+N    FL  
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVN---NAGVGSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           KHA   +   +   I+      + A  + E   +  A  Y  SK  +  L KS+A +  R
Sbjct: 119 KHALPYLRASQPASIV---NISSVAAFKAEP--DYTA--YNASKAAVASLTKSIALDCAR 171

Query: 204 YGIRVDCVS 212
            G+ V C S
Sbjct: 172 RGLDVRCNS 180

Length = 251

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHC 80
           + L+G+VA++TG  +G+G   A    + GA +V A   + +  Q   + LG +    +  
Sbjct: 1   FSLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRR-FLSLTA 59

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTI 137
           D+S+   +  LVD+ V +FG +DILVN+       G +      +  + D + ++ VN  
Sbjct: 60  DLSDIEAIKALVDSAVEEFGHIDILVNNA------GIIRRADAEEFSEKDWDDVMNVNLK 113

Query: 138 GGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
             F + + AA+  + + R G I+        +    +G   +P+  Y  SK  + GL K 
Sbjct: 114 SVFFLTQAAAKHFLKQGRGGKII-----NIASMLSFQGGIRVPS--YTASKHAVAGLTKL 166

Query: 197 LAAELGRYGIRVDCVSHTY 215
           LA E    GI V+ ++  Y
Sbjct: 167 LANEWAAKGINVNAIAPGY 185

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 67.5 bits (165), Expect = 2e-13
 Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 49/211 (23%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-------------------DVQDNLGQ 64
           L G+   ITG + GIG + A    ++GA VVIA                   +++   G+
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 65  ALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTP 124
           AL              D+ +E +V   V+  V KFG +DILVN+   +   G    LDTP
Sbjct: 61  ALP----------CIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTG---TLDTP 107

Query: 125 KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-- 182
               + ++ VNT G +L +K            C+ Y   +       +    N+   +  
Sbjct: 108 MKRYDLMMGVNTRGTYLCSK-----------ACLPYLKKSKNPHILNLSPPLNLNPKWFK 156

Query: 183 ----YGVSKFGILGLVKSLAAELGRYGIRVD 209
               Y ++K+G+   V  +A E    GI V+
Sbjct: 157 NHTAYTMAKYGMSMCVLGMAEEFKPGGIAVN 187

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 34/200 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALAD--KLGHQDVCYIH 79
            +  +V +ITG ++G+G + A+ F + GAKVV +A  ++ L    A+    G + +  + 
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEAL-AVV 63

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSI----LDTPKSDLERLLAVN 135
            DV++   V    D    + G +D  VN+         V++     D    +  R+  V 
Sbjct: 64  ADVADAEAVQAAADRAEEELGPIDTWVNN-------AMVTVFGPFEDVTPEEFRRVTEVT 116

Query: 136 TIG---GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGI 190
            +G   G L    A R M PR RG I+     G+           IP  + Y   +K  I
Sbjct: 117 YLGVVHGTLA---ALRHMRPRDRGAIIQ---VGSALAYRS-----IPLQSAYCA-AKHAI 164

Query: 191 LGLVKSLAAEL--GRYGIRV 208
            G   SL  EL      + V
Sbjct: 165 RGFTDSLRCELLHDGSPVSV 184

Length = 334

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score = 67.1 bits (164), Expect = 4e-13
 Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 7/133 (5%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYI 78
           +RL  +VA++TG   G+GA+ A  F + GA V+IA   ++    +A+++   G +    +
Sbjct: 6   FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHV-V 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D+++      L    V  FG+LDI+VN   N+       +L T   DL      N   
Sbjct: 65  AADLAHPEATAGLAGQAVEAFGRLDIVVN---NVGGTMPNPLLSTSTKDLADAFTFNVAT 121

Query: 139 GFLVAKHAARVMV 151
              +   A  +M+
Sbjct: 122 AHALTVAAVPLML 134

Length = 263

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 66.3 bits (162), Expect = 6e-13
 Identities = 65/260 (25%), Positives = 109/260 (41%), Gaps = 40/260 (15%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD--VCYIH 79
           + L+G+ A++TGG  GIG +  +     GA+V               +   +   V    
Sbjct: 2   WNLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSV 61

Query: 80  CDVSNEREVINLVDTTVAKF-GKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           CDVS+  E   L+DT  + F GKL+ILVN+ G N+      +   T + D   +++ N  
Sbjct: 62  CDVSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKE---AKDYTEE-DYSLIMSTN-- 115

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTA-CTEIEGLCNIPANY-YGVSKFGILGLVK 195
             F  A H +R+  P     +L  +G G     + + G+  +P+   YG +K  +  L +
Sbjct: 116 --FEAAYHLSRLAHP-----LLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTR 168

Query: 196 SLAAELGRYGIRVDCVSHTYGLA-MAEAIAS--------IANAALYNMAKDDD------- 239
           SLA E  +  IRV+ V+       + E +          I    L    + ++       
Sbjct: 169 SLACEWAKDNIRVNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAF 228

Query: 240 -----TSYVGKQNLLVNGGF 254
                 SY+  Q + V+GG 
Sbjct: 229 LCMPAASYITGQIIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 65.8 bits (161), Expect = 7e-13
 Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 14/186 (7%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD--VCYIHCDVSNER 86
            +ITG +SGIG + A+ F K G  V +A  + +    L  +L + +  V     DV++E 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 87  EVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
               ++    A+ G LD+++ N+G     +G  S+ D         +  N +G   + + 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAG---VGKG-TSLGDLSFKAFRETIDTNLLGAAAILEA 116

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
           A      + RG ++       ++   + GL    A  Y  SK  +  L +SL  ++ + G
Sbjct: 117 ALPQFRAKGRGHLV-----LISSVAALRGLPGAAA--YSASKAALSSLAESLRYDVKKRG 169

Query: 206 IRVDCV 211
           IRV  +
Sbjct: 170 IRVTVI 175

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 65.9 bits (161), Expect = 8e-13
 Identities = 51/196 (26%), Positives = 87/196 (44%), Gaps = 12/196 (6%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALAD-KLGHQDVCYIH 79
           + L GR A++TG + GIG + A+   + GA+V++       L  A    K        + 
Sbjct: 6   FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALA 65

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV++   V   +D   A+ G +DILVN+   +++R    + D P    ERLL  N    
Sbjct: 66  FDVTDHDAVRAAIDAFEAEIGPIDILVNNA-GMQFRT--PLEDFPADAFERLLRTNISSV 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F V +  AR M+ R  G I+      +        L       Y  +K  +  L K +A 
Sbjct: 123 FYVGQAVARHMIARGAGKIINIASVQSA-------LARPGIAPYTATKGAVGNLTKGMAT 175

Query: 200 ELGRYGIRVDCVSHTY 215
           +  ++G++ + ++  Y
Sbjct: 176 DWAKHGLQCNAIAPGY 191

Length = 255

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 65.0 bits (159), Expect = 1e-12
 Identities = 59/269 (21%), Positives = 107/269 (39%), Gaps = 54/269 (20%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIH 79
           L+G+  +ITG    IG++  +   + G  V+ AD+       L + LG     + +  + 
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVE 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGC--NLEY-RGFVSI-LDTPKSDLERLLAVN 135
            D++++  +   +  +  K+GK+D  VN     N +Y + F  + LD    +L   L   
Sbjct: 62  LDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLG-- 119

Query: 136 TIGGFLVAKHAARVMVPRRRGCIL------------YTTGTGTTACTEIEGLCNIPANYY 183
               FL ++  A+    +  G ++            +    GT+  + +E         Y
Sbjct: 120 --SSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVE---------Y 168

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVS------------------HTYGLAMAEAIAS 225
              K GI+ L K LA       IRV+CVS                     G  M +    
Sbjct: 169 AAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGMLDP-DD 227

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           I    ++ ++  D + Y+  QN++V+ GF
Sbjct: 228 ICGTLVFLLS--DQSKYITGQNIIVDDGF 254

Length = 256

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 19/196 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI--ADVQDNLGQALAD--KLGHQDVCYI 78
              G+VA++TG + GIG + A    + G  + +  A  +    +   +   LG + +  +
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALA-V 59

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             +V +  ++  +      +FG+LD+ VN+  +   R     ++  +S  +  + +N   
Sbjct: 60  KANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLR---PAMELEESHWDWTMNINAKA 116

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILGLVKS 196
               A+ AA++M     G I+  +  G+    E         NY   GVSK  +  L + 
Sbjct: 117 LLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLE---------NYTTVGVSKAALEALTRY 167

Query: 197 LAAELGRYGIRVDCVS 212
           LA EL   GI V+ VS
Sbjct: 168 LAVELAPKGIAVNAVS 183

Length = 250

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 66.1 bits (162), Expect = 2e-12
 Identities = 44/146 (30%), Positives = 66/146 (45%), Gaps = 19/146 (13%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALAD--KLGHQDVCYIH 79
            L G+V +ITG +SGIG + A    + GA V + A   + L + +A+    G     Y  
Sbjct: 368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAY-T 426

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CD+++   V + V   +A+ G +D LVN+      R   +  D    D ER +AVN  G 
Sbjct: 427 CDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR-FHDYERTMAVNYFG- 484

Query: 140 FLVAKHAARV-------MVPRRRGCI 158
                 A R+       M  RR G +
Sbjct: 485 ------AVRLILGLLPHMRERRFGHV 504

Length = 657

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 63.9 bits (156), Expect = 4e-12
 Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 54/211 (25%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQA---LADKLGHQDVCYIHCD 81
            +V IITGG+SG+G + A+ F + GA VVI    ++ L +A   +    G   V  +  D
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQ--VLTVQMD 58

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSG-----C---NLEYRGFVSILDTPKSDLERLLA 133
           V N  +V  +V+    KFG++D L+N+      C   +L   G+ S++D         + 
Sbjct: 59  VRNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVID---------IV 109

Query: 134 VNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYY-----GV-- 185
           +N  G F  ++   +  + +  +G I+                 N+ A Y      GV  
Sbjct: 110 LN--GTFYCSQAVGKYWIEKGIKGNII-----------------NMVATYAWDAGPGVIH 150

Query: 186 ---SKFGILGLVKSLAAELGR-YGIRVDCVS 212
              +K G+L + ++LA E GR YGIRV+ ++
Sbjct: 151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIA 181

Length = 252

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 64.4 bits (157), Expect = 4e-12
 Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 13/206 (6%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADK---LGHQDVCYIH 79
           L G+VA++TG A+G+G + A    + GA VV+ DV   L    + D+    G + V    
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+S       LV T V   G LDI+VN+      R   ++ D    + + ++AV+  G 
Sbjct: 70  -DISQRATADELVATAVG-LGGLDIVVNNAGITRDRMLFNMSD---EEWDAVIAVHLRGH 124

Query: 140 FLVAKHAARVMVPRRR--GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           FL+ ++AA     + +  G  +Y     T++   + G        YG +K GI  L  S 
Sbjct: 125 FLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQAN--YGAAKAGITALTLSA 182

Query: 198 AAELGRYGIRVDCVSHTYGLAMAEAI 223
           A  LGRYG+R + +      AM   +
Sbjct: 183 ARALGRYGVRANAICPRARTAMTADV 208

Length = 306

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 63.8 bits (156), Expect = 4e-12
 Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 47/225 (20%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L G+ A++TGG  GIGA+      + GA+VV         ++  D L  + V ++  D+
Sbjct: 6   ELAGKRALVTGGTKGIGAATVARLLEAGARVVTT------ARSRPDDL-PEGVEFVAADL 58

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS--GCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           +       +    + + G +DILV+   G +    GF ++ D    + +  L +N     
Sbjct: 59  TTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDE---EWQDELNLN----L 111

Query: 141 LVAKHAARVMVP----RRRGCILYTTGTG--------TTACTEIEGLCNIPANYYGVSKF 188
           L A    R ++P    R  G I++ T           TTA              Y  +K 
Sbjct: 112 LAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTA--------------YAAAKA 157

Query: 189 GILGLVKSLAAELGRYGIRVDCVS-----HTYGLAMAEAIASIAN 228
            +    KSL+ E+   G+RV+ VS         +A+AE +A  A 
Sbjct: 158 ALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAG 202

Length = 260

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 63.3 bits (154), Expect = 6e-12
 Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 14/191 (7%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDV 82
              VA++TG  SGIG + A+   K G +V +    +        +L     +     CDV
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +  E+  LV   VA++G +D+LVN+           + D    D   ++  N  G F V
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADELWLD---VVETNLTGVFRV 118

Query: 143 AKH--AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            K    A  M+ R  G I+    TG       +G+  + A  Y  SK G++G  K+L  E
Sbjct: 119 TKEVLKAGGMLERGTGRIINIASTGGK-----QGV--VHAAPYSASKHGVVGFTKALGLE 171

Query: 201 LGRYGIRVDCV 211
           L R GI V+ V
Sbjct: 172 LARTGITVNAV 182

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 61.8 bits (151), Expect = 7e-12
 Identities = 37/181 (20%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVI---ADVQDNLGQALADKLGHQ--DVCYIHCD 81
              +ITGG  G+G + A+     GA+ ++             L  +L     +V    CD
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++   +  L+    A  G LD +V++   L+      + +      ER+LA    G   
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLDDG---PLEELTPERFERVLAPKVTG--- 114

Query: 142 VAKHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            A +   +      G  +L+++  G        G  N     Y  +   +  L +   AE
Sbjct: 115 -AWNLHELTRDLDLGAFVLFSSVAGVLG---SPGQAN-----YAAANAALDALAEHRRAE 165

Query: 201 L 201
            
Sbjct: 166 G 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 63.1 bits (154), Expect = 1e-11
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 34/194 (17%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHC---D 81
           Q +VA++TG +SGIG + A+     G  V  A  +        DK+       +H    D
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR-------VDKMEDLASLGVHPLSLD 54

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++E  +   VDT +A+ G++D+LVN   N  Y  + +I D P  +  R   VN  G   
Sbjct: 55  VTDEASIKAAVDTIIAEEGRIDVLVN---NAGYGSYGAIEDVPIDEARRQFEVNLFG--- 108

Query: 142 VAKHAARV-------MVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
               AAR+       M  +R G I+  +  G    T +         +Y  +KF + G  
Sbjct: 109 ----AARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGA-------WYHATKFALEGFS 157

Query: 195 KSLAAELGRYGIRV 208
            +L  E+  +GI V
Sbjct: 158 DALRLEVAPFGIDV 171

Length = 273

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 62.6 bits (152), Expect = 1e-11
 Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 11/195 (5%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHC 80
           + L G+VAIITG  +G+G   A    K GA +V   V +    QA  + LG +   +I  
Sbjct: 4   FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRK-FHFITA 62

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+  ++++ ++V   V   G +DIL+N+   +  +    +L+    D + ++ +N    F
Sbjct: 63  DLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQ---DLLEFGNKDWDDVININQKTVF 119

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            +++  A+  V +  G  +    +  +     +G   +P+  Y  SK  ++GL ++LA E
Sbjct: 120 FLSQAVAKQFVKQGNGGKIINIASMLS----FQGGIRVPS--YTASKSAVMGLTRALATE 173

Query: 201 LGRYGIRVDCVSHTY 215
           L +Y I V+ ++  Y
Sbjct: 174 LSQYNINVNAIAPGY 188

Length = 251

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 62.9 bits (153), Expect = 1e-11
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 18/195 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
           RL+G V ++TGGASG+G +    F   GA+V + D      Q L  +  H D V  +  D
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQEL--EAAHGDAVVGVEGD 59

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDL----ERLLAVNTI 137
           V +  +    V   VA FGK+D L+ +    +Y    +++D P   +    + +  +N  
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYS--TALVDIPDDRIDEAFDEVFHINVK 117

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G  L  K A   +V  R   I   +  G           N     Y  +K  ++GLVK L
Sbjct: 118 GYLLAVKAALPALVASRGSVIFTISNAGFYP--------NGGGPLYTAAKHAVVGLVKEL 169

Query: 198 AAELGRYGIRVDCVS 212
           A EL  Y +RV+ V+
Sbjct: 170 AFELAPY-VRVNGVA 183

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 62.7 bits (153), Expect = 1e-11
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQDVCYIHCDVSN 84
            +V  ITG + G G +  +   + G +VV  A     L   LA+K G + +  +  DV++
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA-DLAEKYGDR-LLPLALDVTD 60

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
              V   V+T V  FG+LDI+VN   N  Y  F  I +  +S+    +  N  G   V +
Sbjct: 61  RAAVFAAVETAVEHFGRLDIVVN---NAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQ 117

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
                +  +R G I+  +  G  +   + G+       Y  SK+ + G+ ++LA E+  +
Sbjct: 118 AVLPYLREQRSGHIIQISSIGGISAFPMSGI-------YHASKWALEGMSEALAQEVAEF 170

Query: 205 GIRVDCV 211
           GI+V  V
Sbjct: 171 GIKVTLV 177

Length = 275

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 51/190 (26%), Positives = 82/190 (43%), Gaps = 21/190 (11%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCDV 82
             G+  ++ GG+ GIGA+  + F  +GA V        +  + LA + G      +  D 
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGAT---AVQTDS 60

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++   VI      V K G LDILV N+G  +    F   L+    D++RL  +N    + 
Sbjct: 61  ADRDAVI----DVVRKSGALDILVVNAGIAV----FGDALELDADDIDRLFKINIHAPYH 112

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            +  AAR M    R  I+   G+       + G+       Y  SK  + G+ + LA + 
Sbjct: 113 ASVEAARQMPEGGRIIII---GSVNGDRMPVAGMAA-----YAASKSALQGMARGLARDF 164

Query: 202 GRYGIRVDCV 211
           G  GI ++ V
Sbjct: 165 GPRGITINVV 174

Length = 237

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 42/211 (19%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH- 79
            + + G++ ++TGG+ GIG   AQ F + GA+V+I+  +       A++L     C    
Sbjct: 1   LFSVAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIP 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNS-----GCNLEYRGFVSILDTPKSDLERLLAV 134
            D+S+E  +  LV     +  +LD+LVN+     G  LE          P+S  ++++ +
Sbjct: 61  ADLSSEEGIEALVARVAERSDRLDVLVNNAGATWGAPLE--------AFPESGWDKVMDI 112

Query: 135 NTIGGFLV-------------AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           N    F +             A++ ARV+              G+ A   + GL N    
Sbjct: 113 NVKSVFFLTQALLPLLRAAATAENPARVI------------NIGSIAGIVVSGLENYS-- 158

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
            YG SK  +  L + LA EL    I V+ ++
Sbjct: 159 -YGASKAAVHQLTRKLAKELAGEHITVNAIA 188

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 54/256 (21%), Positives = 94/256 (36%), Gaps = 44/256 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQ--------DNLGQALADKLGHQDVCYI 78
           ++A++TG   GIG++ A+    +G +V+                     D+     V   
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQ-----VRLK 57

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV++  E    +     + G +DILVN+        F         +   ++  N   
Sbjct: 58  ELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRDSVF---KRMSHQEWNDVINTNLNS 114

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSL 197
            F V +     M  +  G I+  +         + GL        Y  +K G++G  K+L
Sbjct: 115 VFNVTQPLFAAMCEQGYGRIINIS--------SVNGLKGQFGQTNYSAAKAGMIGFTKAL 166

Query: 198 AAELGRYGIRVDCVSHTY-GLAMAEAI-----ASIAN-------------AALYNMAKDD 238
           A+E  RYGI V+C++  Y    M E +      SI N             AA       +
Sbjct: 167 ASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSE 226

Query: 239 DTSYVGKQNLLVNGGF 254
              ++  + + +NGG 
Sbjct: 227 AAGFITGETISINGGL 242

Length = 245

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 62.3 bits (152), Expect = 2e-11
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 19/189 (10%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIA----DVQDNLGQALADKLGHQDVCYIH-C 80
            ++AI+TG +SG G        K G  V+      + Q+NL  + A +L  Q    +   
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENL-LSQATQLNLQQNIKVQQL 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV+++  + N     + + G++D+LVN+       GFV   + P  +  +    N  G  
Sbjct: 62  DVTDQNSIHN-FQLVLKEIGRIDLLVNNA-GYANGGFVE--EIPVEEYRKQFETNVFGAI 117

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAA 199
            V +     M  ++ G I+          + I G    P  + Y  SK+ + G  +SL  
Sbjct: 118 SVTQAVLPYMRKQKSGKIINI--------SSISGRVGFPGLSPYVSSKYALEGFSESLRL 169

Query: 200 ELGRYGIRV 208
           EL  +GI V
Sbjct: 170 ELKPFGIDV 178

Length = 280

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 50/194 (25%), Positives = 84/194 (43%), Gaps = 17/194 (8%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQDVCYIHC 80
               G+ A++TG   GIG +  +   K GA+VV ++  Q +L   + +  G + VC    
Sbjct: 3   LDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGIEPVC---V 59

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+S+        +  +   G +D+LVN+      + F   L+  K   +R   VN     
Sbjct: 60  DLSDWDA----TEEALGSVGPVDLLVNNAAVAILQPF---LEVTKEAFDRSFDVNVRAVI 112

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            V++  AR M+ R     +    +  +       L N     Y  +K  +  L K +A E
Sbjct: 113 HVSQIVARGMIARGVPGSIVNVSSQASQRA----LTNHTV--YCSTKAALDMLTKVMALE 166

Query: 201 LGRYGIRVDCVSHT 214
           LG + IRV+ V+ T
Sbjct: 167 LGPHKIRVNSVNPT 180

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 61.7 bits (150), Expect = 2e-11
 Identities = 59/254 (23%), Positives = 94/254 (37%), Gaps = 42/254 (16%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA----DKLGHQDVCYIHCDV 82
           R+A++TGG  GIG +  Q   K+G +V  A+   N  +A A          D   +  DV
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVA-ANCGPNEERAEAWLQEQGALGFDFRVVEGDV 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+       V    A+ G +D+LVN+        F  +          ++  N    F V
Sbjct: 60  SSFESCKAAVAKVEAELGPIDVLVNNAGITRDATFKKM---TYEQWSAVIDTNLNSVFNV 116

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI--PANYYGVSKFGILGLVKSLAAE 200
            +     M  R  G I+          + + G        N Y  +K G++G  K+LA E
Sbjct: 117 TQPVIDGMRERGWGRII--------NISSVNGQKGQFGQTN-YSAAKAGMIGFTKALAQE 167

Query: 201 LGRYGIRVDCVSHTY-GLAMAEAI--------------------ASIANAALYNMAKDDD 239
               G+ V+ +S  Y    M  A+                      IA A  +  +  ++
Sbjct: 168 GATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFLAS--EE 225

Query: 240 TSYVGKQNLLVNGG 253
             Y+    L +NGG
Sbjct: 226 AGYITGATLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 60.0 bits (145), Expect = 4e-11
 Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 2/85 (2%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHC 80
           +L G+VAI+TGG  GIG + A L  K GAKV++ D+    GQA  +++ +   +  ++  
Sbjct: 13  KLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSY 72

Query: 81  DVSNEREVINLVDTTVAKFGKLDIL 105
           D+  + +   ++  T+  F ++D+L
Sbjct: 73  DMEKQGDWQRVISITLNAFSRIDML 97

Length = 169

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 61.2 bits (148), Expect = 5e-11
 Identities = 54/199 (27%), Positives = 89/199 (44%), Gaps = 25/199 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-------DVQDNLGQALADKLGHQDV 75
           RL+ R A++TGG SGIG +AA  + + GA V I+       D QD   + + ++ G + V
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDV--KKIIEECGRKAV 103

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDIL-VNSGCNLEYRGFVSILDTPKSDLERLLAV 134
             +  D+S+E+   +LV       G LDI+ + +G  +       I D      ++  A+
Sbjct: 104 -LLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIP---DIADLTSEQFQKTFAI 159

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGL 193
           N    F + + A    +P      L   G      + I+     P    Y  +K  IL  
Sbjct: 160 NVFALFWLTQEA----IP------LLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNY 209

Query: 194 VKSLAAELGRYGIRVDCVS 212
            + LA ++   GIRV+ V+
Sbjct: 210 SRGLAKQVAEKGIRVNIVA 228

Length = 294

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 61.3 bits (149), Expect = 6e-11
 Identities = 52/185 (28%), Positives = 84/185 (45%), Gaps = 14/185 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIH 79
            L G V +ITG +SGIG + A+ F + GA++V+A   +   QA+A+    LG  +V  + 
Sbjct: 4   PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALG-AEVLVVP 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV++  +V  L     +  G++D+ VN   N+         +TP    E+++  N IG 
Sbjct: 63  TDVTDADQVKALATQAASFGGRIDVWVN---NVGVGAVGRFEETPIEAHEQVIQTNLIGY 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
              A  A  +   +  G  +     G  A           A  Y  SKFG+ G  ++L  
Sbjct: 120 MRDAHAALPIFKKQGHGIFINMISLGGFAAQPY-------AAAYSASKFGLRGFSEALRG 172

Query: 200 ELGRY 204
           EL  +
Sbjct: 173 ELADH 177

Length = 330

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 60.3 bits (147), Expect = 8e-11
 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 38/203 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-------VQDNLGQALADKLGHQDV 75
           R  G+V ++TG A GIG   A      GA+VV+ D       V   L  A  + L     
Sbjct: 5   RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALA---- 60

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTP---KSDLERL 131
             +  D+         +   V  FG++D+L+N+ G  +  + F          ++++ R 
Sbjct: 61  --LTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEY--EEEQIEAEIRRS 116

Query: 132 LAVNTIGGF--LVAKHAA-RVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKF 188
           L       F  L    A    M+ +  G I+  +   T       G+  +P   Y  +K 
Sbjct: 117 L-------FPTLWCCRAVLPHMLAQGGGAIVNVSSIAT------RGINRVP---YSAAKG 160

Query: 189 GILGLVKSLAAELGRYGIRVDCV 211
           G+  L  SLA E   +GIRV+ V
Sbjct: 161 GVNALTASLAFEYAEHGIRVNAV 183

Length = 260

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 60.1 bits (146), Expect = 9e-11
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 40/206 (19%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALAD 68
           Y L+ +V ++TG   GIG + A    K G+ VV+               V++N G+ +  
Sbjct: 2   YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG- 60

Query: 69  KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSD 127
                    +  DVS       L   T+ ++G  DILV N+G  L    F   L+     
Sbjct: 61  ---------VLADVSTREGCETLAKATIDRYGVADILVNNAGLGL----FSPFLNVDDKL 107

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVS 186
           +++ ++ +       ++  A+ M  R  G I+            + G+      + YG  
Sbjct: 108 IDKHISTDFKSVIYCSQELAKEM--REGGAIVNI--------ASVAGIRPAYGLSIYGAM 157

Query: 187 KFGILGLVKSLAAELGRYGIRVDCVS 212
           K  ++ L K LA EL    IRV+ ++
Sbjct: 158 KAAVINLTKYLALELAPK-IRVNAIA 182

Length = 252

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 59.6 bits (145), Expect = 1e-10
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLGHQDVCYIHCDV 82
           L G   +ITGG SGIG + A+ F + G  V+I    ++ L +A  +     ++  I  DV
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKE---LPNIHTIVLDV 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS 108
            +   V  L +  ++++  LDIL+N+
Sbjct: 60  GDAESVEALAEALLSEYPNLDILINN 85

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 59.7 bits (145), Expect = 1e-10
 Identities = 55/192 (28%), Positives = 81/192 (42%), Gaps = 24/192 (12%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALAD--KLGHQDVCYIHCDVSNE 85
             +TG ASGIG + A      GA++ + D   D L Q +AD   LG     +   D+S+ 
Sbjct: 3   CFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDY 62

Query: 86  REVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKS----DLERLLAVNTIGGF 140
             V        A  G +D+++N +G        +S   T          R++ VN +G  
Sbjct: 63  DAVAAFAADIHAAHGSMDVVMNIAG--------ISAWGTVDRLTHEQWRRMVDVNLMGPI 114

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAA 199
            V +     MV   RG  L    +         GL  +P +  Y  SKFG+ GL + L  
Sbjct: 115 HVIETFVPPMVAAGRGGHLVNVSSAA-------GLVALPWHAAYSASKFGLRGLSEVLRF 167

Query: 200 ELGRYGIRVDCV 211
           +L R+GI V  V
Sbjct: 168 DLARHGIGVSVV 179

Length = 272

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 59.3 bits (144), Expect = 2e-10
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 7/88 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYI 78
           L G+ A++TG + GIGA  A++    GA VV+     A   + +   +    G      +
Sbjct: 4   LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGR--ASAV 61

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILV 106
             D+++E  V  L+DT   +FG LD LV
Sbjct: 62  GADLTDEESVAALMDTAREEFGGLDALV 89

Length = 248

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 58.7 bits (143), Expect = 2e-10
 Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 28/200 (14%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVV--------IADVQDNLGQALADKLGHQDV 75
           L+ R+ ++TG   GIG  AA  + ++GA V+        +  V D +  A     G    
Sbjct: 10  LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA-----GGPQP 64

Query: 76  CYIHCDVSN--EREVINLVDTTVAKFGKLD-ILVNSGCNLEYRGFVSILDTPKSDLERLL 132
             I  D+     +    L DT   +FG+LD +L N+G   E               + ++
Sbjct: 65  AIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQ---DPEVWQDVM 121

Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGIL 191
            VN    F++ +    +++      +++T+   G       +G  N  A  Y VSKF   
Sbjct: 122 QVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR------QGRANWGA--YAVSKFATE 173

Query: 192 GLVKSLAAELGRYGIRVDCV 211
           G+++ LA E     +RV+C+
Sbjct: 174 GMMQVLADEYQGTNLRVNCI 193

Length = 247

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 58.0 bits (140), Expect = 4e-10
 Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 16/194 (8%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK---LGHQDVCYIHC 80
           L  R+ ++TG + GIG  AA  + + GA V++    +   + +AD     G +   +   
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFIL 61

Query: 81  DVSN--EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           D+          L       + +LD ++++   L     +S         + +  VN   
Sbjct: 62  DLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQ--NPQVWQDVXQVNVNA 119

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGT-GTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
            F++ +    +++    G +++T+ + G        G  N  A  Y VSKF   GL + L
Sbjct: 120 TFMLTQALLPLLLKSDAGSLVFTSSSVGRQ------GRANWGA--YAVSKFATEGLXQVL 171

Query: 198 AAELGRYGIRVDCV 211
           A E  +  +RV+C+
Sbjct: 172 ADEYQQRNLRVNCI 185

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 59.1 bits (144), Expect = 4e-10
 Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 7/87 (8%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV---QDNLGQALADKLGHQDVCYIHC 80
           L G+VA++TG A GIGA+ A++  ++GA VV  DV    + L  A+A+++G   +     
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEAL-AAVANRVGGTAL---AL 263

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVN 107
           D++       + +    + G LDI+V+
Sbjct: 264 DITAPDAPARIAEHLAERHGGLDIVVH 290

Length = 450

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.4 bits (139), Expect = 6e-10
 Identities = 52/207 (25%), Positives = 86/207 (41%), Gaps = 39/207 (18%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQ---ALADKLGHQDVCYI 78
           L+G+  ++ G A+   I    A+  H  GAK+V     + L +    LAD L  Q+   +
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLL 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV+++ E+    +T   + G +  + +            I    K DL       +  
Sbjct: 65  PCDVTSDEEITACFETIKEEVGVIHGVAHC-----------IAFANKEDLRGEFLETSRD 113

Query: 139 GFLVAK-----------HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGV 185
           GFL+A+             A+ ++    G I+  T  G     +         NY   GV
Sbjct: 114 GFLLAQNISAYSLTAVAREAKKLMTEG-GSIVTLTYLGGERVVQ---------NYNVMGV 163

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS 212
           +K  +   VK LA +LG+ GIRV+ +S
Sbjct: 164 AKASLEASVKYLANDLGKDGIRVNAIS 190

Length = 257

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 57.2 bits (139), Expect = 7e-10
 Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 26  GRVAIITGGASGIG-ASAAQLFHKNGAKVVIADVQDNLGQA---LADKLGHQDVCYIHCD 81
           G  A++TG   GIG A A +L  +    ++I+  Q+ L      + +K G +    I  D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVE-TKTIAAD 59

Query: 82  VSNEREVINLVDTTVAKFGKLDI--LVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            S   ++   ++  +     LDI  LVN+ G +         L+TP+ +L+ ++ VN + 
Sbjct: 60  FSAGDDIYERIEKELE---GLDIGILVNNVGISHSIP--EYFLETPEDELQDIINVNVMA 114

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSL 197
              + +     MV R++G I+    +         GL   P    Y  SK  +    ++L
Sbjct: 115 TLKMTRLILPGMVKRKKGAIV-NISSFA-------GLIPTPLLATYSASKAFLDFFSRAL 166

Query: 198 AAELGRYGIRVDCV 211
             E    GI V  +
Sbjct: 167 YEEYKSQGIDVQSL 180

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 57.2 bits (138), Expect = 1e-09
 Identities = 45/198 (22%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQDVCYIHC 80
           + L+G+VA++TG  +G+G   A    + G  +V I  V+          LG + +  +  
Sbjct: 6   FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLS-LTA 64

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTI 137
           D+     +  L++  VA+FG +DILVN+       G +     ++  + D + ++ +N  
Sbjct: 65  DLRKIDGIPALLERAVAEFGHIDILVNNA------GLIRREDAIEFSEKDWDDVMNLNIK 118

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F +++ AA+  + +  G  +    +  +     +G   +P+  Y  SK G++G+ + +
Sbjct: 119 SVFFMSQAAAKHFIAQGNGGKIINIASMLS----FQGGIRVPS--YTASKSGVMGVTRLM 172

Query: 198 AAELGRYGIRVDCVSHTY 215
           A E  ++ I V+ ++  Y
Sbjct: 173 ANEWAKHNINVNAIAPGY 190

Length = 253

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 55.9 bits (135), Expect = 3e-09
 Identities = 65/269 (24%), Positives = 105/269 (39%), Gaps = 50/269 (18%)

Query: 20  SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK-------LGH 72
           + + L+G+V +I GGA  +G   A+     GAK V         +A A++        G 
Sbjct: 2   ADHSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGA 61

Query: 73  QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLE 129
           + V +   D++    V  L D   A FG+ DI +N+       G V    I++  +++ +
Sbjct: 62  KAVAF-QADLTTAAAVEKLFDDAKAAFGRPDIAINT------VGKVLKKPIVEISEAEYD 114

Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
            + AVN+   F   K A R +    +   L T+  G  A T         + Y G SK  
Sbjct: 115 EMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLG--AFTPFY------SAYAG-SKAP 165

Query: 190 ILGLVKSLAAELGRYGIRVDCV-------SHTYGLAMAEAIASIANAALYNMAKD----- 237
           +    ++ + E G  GI V  V          Y    AEA+A    AA  +         
Sbjct: 166 VEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTD 225

Query: 238 ------------DDTSYVGKQNLLVNGGF 254
                        D  ++  Q +L+NGG+
Sbjct: 226 IEDIVPFIRFLVTDGWWITGQTILINGGY 254

Length = 257

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 55.6 bits (134), Expect = 3e-09
 Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 32/199 (16%)

Query: 28  VAIITGGASGIG-ASAAQL----------FHKN--GAKVVIADVQDNLGQALADKLGHQD 74
           +A++TGG+ GIG A+A  L          + +N   A+ V+  +    G+A         
Sbjct: 3   IALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFV------- 55

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
              +  D+S+E +V+ +          L  LVN+   L  +  V  L   +  + R+L+ 
Sbjct: 56  ---LQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAER--INRVLST 110

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILG 192
           N  G FL  + A + M  +  G     +G      +        P  Y  Y  SK  I  
Sbjct: 111 NVTGYFLCCREAVKRMALKHGG-----SGGAIVNVSSAASRLGAPGEYVDYAASKGAIDT 165

Query: 193 LVKSLAAELGRYGIRVDCV 211
           L   L+ E+   GIRV+CV
Sbjct: 166 LTTGLSLEVAAQGIRVNCV 184

Length = 247

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 54.7 bits (132), Expect = 7e-09
 Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 26/201 (12%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLG------QALADKLGHQDV 75
           L G+ A++TG A+   I    AQ  H  GA++ I  + D  G      + L + L     
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPL--NPS 61

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNS---GCNLEYRGFVSILDTPKSDLERLL 132
            ++ CDV ++ ++    +T   K+GKLDILV+        E  G  S   T +    R L
Sbjct: 62  LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFS--ATSREGFARAL 119

Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGIL 191
            ++      + K A  +M          + G      T + G+  IP  N  GV+K  + 
Sbjct: 120 EISAYSLAPLCKAAKPLM----------SEGGSIVTLTYLGGVRAIPNYNVMGVAKAALE 169

Query: 192 GLVKSLAAELGRYGIRVDCVS 212
             V+ LAAELG   IRV+ +S
Sbjct: 170 ASVRYLAAELGPKNIRVNAIS 190

Length = 258

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 54.8 bits (132), Expect = 8e-09
 Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 16/189 (8%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVS 83
           R A++ G +SGIGA+ A      G  V +   +    + L DK+   G + V     DV+
Sbjct: 11  RPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVA-FPLDVT 69

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +   V + V       G++++LV+   +  + G +  + T     E  + ++ +G   +A
Sbjct: 70  DPDSVKSFVAQAEEALGEIEVLVSGAGDTYF-GKLHEISTE--QFESQVQIHLVGANRLA 126

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELG 202
                 M+ RRRG +++    G+        L   P    YG +K G+  +V +L  EL 
Sbjct: 127 TAVLPGMIERRRGDLIF---VGSDV-----ALRQRPHMGAYGAAKAGLEAMVTNLQMELE 178

Query: 203 RYGIRVDCV 211
             G+R   V
Sbjct: 179 GTGVRASIV 187

Length = 274

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 2e-08
 Identities = 41/198 (20%), Positives = 83/198 (41%), Gaps = 34/198 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
            L+ +  ++TG + GIG + A+     GA++++        +ALA +L +     ++  D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           +++E      V     + G +++L+N +G N     F  + D     +ERLLA+N     
Sbjct: 62  LTSE-AGREAVLARAREMGGINVLINNAGVN----HFALLEDQDPEAIERLLALNLTAPM 116

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY----------YGVSKFGI 190
            + +    ++  +    ++                 N+ + +          Y  SKF +
Sbjct: 117 QLTRALLPLLRAQPSAMVV-----------------NVGSTFGSIGYPGYASYCASKFAL 159

Query: 191 LGLVKSLAAELGRYGIRV 208
            G  ++L  EL   G+RV
Sbjct: 160 RGFSEALRRELADTGVRV 177

Length = 263

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.2 bits (128), Expect = 2e-08
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 37/204 (18%)

Query: 24  LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
           L G+  ++ G A    I    AQ     GA V+     D + ++L  KL  ++   + CD
Sbjct: 5   LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECD 63

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V+++  +     T   + GK+D +V++           I    K +L   +   +  G+ 
Sbjct: 64  VASDESIERAFATIKERVGKIDGIVHA-----------IAYAKKEELGGNVTDTSRDGYA 112

Query: 142 ------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKF 188
                       VAK+A  ++ P     I+  T  G+           IP  N  G++K 
Sbjct: 113 LAQDISAYSLIAVAKYARPLLNPG--ASIVTLTYFGSERA--------IPNYNVMGIAKA 162

Query: 189 GILGLVKSLAAELGRYGIRVDCVS 212
            +   V+ LA +LG+ GIRV+ +S
Sbjct: 163 ALESSVRYLARDLGKKGIRVNAIS 186

Length = 252

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 51.8 bits (125), Expect = 4e-08
 Identities = 43/191 (22%), Positives = 72/191 (37%), Gaps = 46/191 (24%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
            I+ G    IG + AQL   +G +V+ A              G     Y   D+++E  +
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITA--------------GRSSGDY-QVDITDEASI 45

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
             L +      G  D +V++  + E   F  + +   +D +R L    +G   + +H   
Sbjct: 46  KALFEKV----GHFDAIVSTAGDAE---FAPLAELTDADFQRGLNSKLLGQINLVRHGLP 98

Query: 149 VMVPRRRGCILYTTGT-------GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            +     G I  T+G        G  A   + G               + G V++ A EL
Sbjct: 99  YLND--GGSITLTSGILAQRPIPGGAAAATVNG--------------ALEGFVRAAAIEL 142

Query: 202 GRYGIRVDCVS 212
            R GIR++ VS
Sbjct: 143 PR-GIRINAVS 152

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 52.1 bits (125), Expect = 6e-08
 Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 14/149 (9%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG--HQDVCYIHCDVSNE 85
            +ITG +SG+G +AA+   + G   V+   +D L  +  A ++G        +HCD+++ 
Sbjct: 4   VVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLASL 63

Query: 86  REVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
             V   VD        LD LV   CN  +          T     E  + VN +G FL+ 
Sbjct: 64  DSVRQFVDNFRRTGRPLDALV---CNAAVYLPTAKEPRFTADG-FELTVGVNHLGHFLLT 119

Query: 144 K----HAARVMVPRRRGCILYTTGTGTTA 168
                   R      R  ++  + T    
Sbjct: 120 NLLLEDLQRSENASPR-IVIVGSITHNPN 147

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 45/205 (21%), Positives = 78/205 (38%), Gaps = 29/205 (14%)

Query: 24  LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVI-----------ADVQDNLGQALADKL 70
           L  ++A++TG +  +GIGA+  +     G  +               + D     L +++
Sbjct: 3   LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEI 62

Query: 71  GHQDVCYIH--CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDL 128
               V   H   D+S       +      + G   IL+N+     +     +  T +  L
Sbjct: 63  ESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEEL--TAEQ-L 119

Query: 129 ERLLAVNTIGGFLVAKHAARVMVPRRRGCILY-TTGTGTTACTEIEGLCNIPANY-YGVS 186
           ++  AVN     L++   A+    +  G I+  T+G         + L  +P    Y  +
Sbjct: 120 DKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSG---------QSLGPMPDELAYAAT 170

Query: 187 KFGILGLVKSLAAELGRYGIRVDCV 211
           K  I    KSLA EL   GI V+ V
Sbjct: 171 KGAIEAFTKSLAPELAEKGITVNAV 195

Length = 256

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 51.5 bits (123), Expect = 9e-08
 Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 27/206 (13%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVI------ADVQDNLGQALADKLGHQDVCYIHCD 81
            A++TG A  IG+S A   H+ G +VV+      A       +  A +      C    D
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTC--QAD 60

Query: 82  VSNEREVIN----LVDTTVAKFGKLDILVNSGCNL--------EYRGFVSILDTPKSDLE 129
           +SN   + +    ++D     FG+ D+LVN+            +    V    + +  + 
Sbjct: 61  LSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVA 120

Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA---NYYGVS 186
            L   N I  + + K  A+    R+ G       T  +     + + + P      Y ++
Sbjct: 121 ELFGSNAIAPYFLIKAFAQ----RQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMA 176

Query: 187 KFGILGLVKSLAAELGRYGIRVDCVS 212
           K  + GL +S A EL    IRV+ V+
Sbjct: 177 KHALEGLTRSAALELAPLQIRVNGVA 202

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 22/186 (11%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCDVSNEREV 88
           ++T  + GIG + A+   K GA+VVI+   ++NL +AL +   + +V  +  D+S++ ++
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 89  INLVDTTVAKFGKLDILV-NSG------CNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            NLV       G +D LV N+G      C L   G+   L+        L  V    G+L
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEA-----ALLHLVAP--GYL 116

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
                   +  + +G ++Y +                P     V++ G++ L K ++   
Sbjct: 117 TTLLIQAWLEKKMKGVLVYLSSVSVKEPMP-------PLVLADVTRAGLVQLAKGVSRTY 169

Query: 202 GRYGIR 207
           G  GIR
Sbjct: 170 GGKGIR 175

Length = 259

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 50.7 bits (122), Expect = 2e-07
 Identities = 75/286 (26%), Positives = 109/286 (38%), Gaps = 89/286 (31%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKV-VIADVQDN-------LGQALADKL 70
           ++ +   G+  ++ GG SGI    AQ F + GA V V +  Q+        L QA  + L
Sbjct: 2   TTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGL 61

Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC---------NLEYRGFVSIL 121
           G   V     DV +   V         +FG +D+LV SG           +   GF +++
Sbjct: 62  G---VSA---DVRDYAAVEAAFAQIADEFGPIDVLV-SGAAGNFPAPAAGMSANGFKTVV 114

Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           D    DL        +G F V K A  ++  RR G                  +  I A 
Sbjct: 115 DI---DL--------LGTFNVLKAAYPLL--RRPGA----------------SIIQISAP 145

Query: 182 YYGV----------SKFGILGLVKSLAAELGRYGIRVDCVS-----HTYGLA-------M 219
              V          +K G+  L ++LA E G  GIRV+ +       T G+A       +
Sbjct: 146 QAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPEL 205

Query: 220 AEAIAS------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             A+A             IANAAL+     D  SY+    L V+GG
Sbjct: 206 QAAVAQSVPLKRNGTKQDIANAALF--LASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 50.5 bits (121), Expect = 2e-07
 Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 25/199 (12%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           +QG+  +I G A+   I    A+     GA++      + LG   + LA+ LG   V  +
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFV--L 62

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAV 134
            CDV +   V  + +    K+GKLD +V+    S  N E +G  +  DT + +  R + +
Sbjct: 63  PCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKN-ELKGRYA--DTTRENFSRTMVI 119

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGL 193
           +      +AK AA++M P     +  T G  T           +P  N  GV+K  +   
Sbjct: 120 SCFSFTEIAKRAAKLM-PDGGSMLTLTYGGSTRV---------MPNYNVMGVAKAALEAS 169

Query: 194 VKSLAAELGRYGIRVDCVS 212
           V+ LAA+ G  GIRV+ +S
Sbjct: 170 VRYLAADYGPQGIRVNAIS 188

Length = 271

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 50.3 bits (121), Expect = 2e-07
 Identities = 51/203 (25%), Positives = 73/203 (35%), Gaps = 44/203 (21%)

Query: 27  RVAIITGGASGIG-ASAAQLFHKNGAKVVIADVQDNLGQALADKL--GHQDVCYIHCDVS 83
           +VA++TG   GIG     QL       V++       GQA  +KL      V +   DV+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD----LERLLAVNTIGG 139
           ++  +    D    K+G LDILVN+       G         +         +  N  G 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNA------GIAFKGFDDSTPTREQARETMKTNFFGT 114

Query: 140 FLVAK---------HAAR-VMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
             V +          A R V V           G+ T+A              YGVSK  
Sbjct: 115 VDVTQALLPLLKKSPAGRIVNVSSG-------LGSLTSA--------------YGVSKAA 153

Query: 190 ILGLVKSLAAELGRYGIRVDCVS 212
           +  L + LA EL   GI+V+   
Sbjct: 154 LNALTRILAKELKETGIKVNACC 176

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 50.3 bits (120), Expect = 2e-07
 Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 13/126 (10%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKV-VIADVQDNLGQALAD---KLGHQDVCYIH-C 80
           GR  +ITG  SGIG +AA    K G  V ++   Q    +A  +   + G+Q++ ++H  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNI-FLHIV 59

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           D+S+ ++V   V+    +  KL +L+ N+GC +  R            LE+  A NT+G 
Sbjct: 60  DMSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTE------DGLEKNFATNTLGT 113

Query: 140 FLVAKH 145
           +++  H
Sbjct: 114 YILTTH 119

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 35/209 (16%)

Query: 23  RLQGRVAIITGG--ASGIGASAAQLFHKNGA-----------KVVIADVQDNLGQALADK 69
           +L+ +VA++TG     GIGA+  +   + GA           K +   V  +    L ++
Sbjct: 3   QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEE 62

Query: 70  LGHQDV-CY-IHCDVSNEREVINLVDTTVAKFGKLDILVNSGC---NLEYRGFVSILDTP 124
           L    V    +  D++       L++    + G   ILVN+     N ++    +     
Sbjct: 63  LLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEE--- 119

Query: 125 KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-YTTGTGTTACTEIEGLCNIPANY- 182
              L++   VN     L++   AR    +  G I+  T+G         +    +     
Sbjct: 120 ---LDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSG---------QFQGPMVGELA 167

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           Y  +K  I  L  SLAAE+   GI V+ +
Sbjct: 168 YAATKGAIDALTSSLAAEVAHLGITVNAI 196

Length = 256

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 49.7 bits (119), Expect = 2e-07
 Identities = 64/257 (24%), Positives = 98/257 (38%), Gaps = 60/257 (23%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
           ++ GG+SGIG + A+ F   GA+V IA   +D L  A     G   V     D+++E   
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAA- 59

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
              VD   A+ G  D +V +  +    G V  L       +  +     G + VA+ AAR
Sbjct: 60  ---VDAFFAEAGPFDHVVITAADTPG-GPVRALPLA--AAQAAMDSKFWGAYRVAR-AAR 112

Query: 149 VMVPRRRGCILYTTGTGT---TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
           +      G + + +G      +A   ++G  N            +  L + LA EL    
Sbjct: 113 I---APGGSLTFVSGFAAVRPSASGVLQGAINA----------ALEALARGLALELAP-- 157

Query: 206 IRVDCVSHTYGL---------------AMAEAIAS------------IANAALYNMAKDD 238
           +RV+ VS   GL               AM  A A             +ANA L+  A   
Sbjct: 158 VRVNTVSP--GLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAA--- 212

Query: 239 DTSYVGKQNLLVNGGFR 255
              +     +LV+GG  
Sbjct: 213 -NGFTTGSTVLVDGGHA 228

Length = 230

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 5e-07
 Identities = 52/185 (28%), Positives = 78/185 (42%), Gaps = 23/185 (12%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE 87
           V +ITG +SGIG + A  F   G +V     +    +ALA   G   V     DV++   
Sbjct: 3   VVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAA-GFTAV---QLDVNDGAA 58

Query: 88  VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA 147
           +  L +   A+ G LD+L+N   N  Y     +LD     + R    N    F V     
Sbjct: 59  LARLAEELEAEHGGLDVLIN---NAGYGAMGPLLDGGVEAMRRQFETNV---FAVVG-VT 111

Query: 148 RVMVP---RRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGR 203
           R + P   R RG ++   G+       + G+   P A  Y  SK  +  L  +L  EL  
Sbjct: 112 RALFPLLRRSRGLVV-NIGS-------VSGVLVTPFAGAYCASKAAVHALSDALRLELAP 163

Query: 204 YGIRV 208
           +G++V
Sbjct: 164 FGVQV 168

Length = 274

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 48.9 bits (117), Expect = 7e-07
 Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQ----DVCYIHC 80
           GRVA++TG  +G+G   A      GA VV+A V++ + G+A A ++       DV     
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLA-VRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVN 107
           D+++   V    D   A + ++D+L+N
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLIN 101

Length = 306

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 48.4 bits (116), Expect = 9e-07
 Identities = 52/216 (24%), Positives = 84/216 (38%), Gaps = 59/216 (27%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L G+  ++ G A+   I    A+ F   GA++ +  + D      + LA++L        
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFL-- 65

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV    ++  +      ++G+LD L++S           I   PK DL   +   +  
Sbjct: 66  PLDVREPGQLEAVFARIAEEWGRLDFLLHS-----------IAFAPKEDLHGRVVDCSRE 114

Query: 139 GFLVAK----HA----ARVMVP--RRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK- 187
           GF +A     H+    AR+  P     G +L  +                   YYG  K 
Sbjct: 115 GFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMS-------------------YYGAEKV 155

Query: 188 ---FGILGLVKS--------LAAELGRYGIRVDCVS 212
              + ++G VK+        LAAELG  GIRV  +S
Sbjct: 156 VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAIS 191

Length = 258

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 1e-06
 Identities = 48/201 (23%), Positives = 82/201 (40%), Gaps = 24/201 (11%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCYI 78
           ++G+  +I+GG  GIG +    F ++G  +        +  + + + L  K G +   Y 
Sbjct: 6   MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAY- 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAV 134
             ++        L       F ++D  ++    SG  +   G+   +      L  +   
Sbjct: 65  PLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAV-VGGYTKFMRLKPKGLNNIYTA 123

Query: 135 NTIGGFLV-AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGIL 191
            T+  F+V A+ AA+ M     G I+  + TG     E         NY  +G SK  + 
Sbjct: 124 -TVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE---------NYAGHGTSKAAVE 173

Query: 192 GLVKSLAAELGRYGIRVDCVS 212
            +VK  A ELG   IRV+ VS
Sbjct: 174 TMVKYAATELGEKNIRVNAVS 194

Length = 260

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 50/230 (21%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           ++G+V ++TG   GIG +  +     GA  V A  +D      +       V  +  DV+
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARD----PESVTDLGPRVVPLQLDVT 59

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   V    +        + ILV N+G     R    +L+  +  L   +  N  G   +
Sbjct: 60  DPASVAAAAEAA----SDVTILVNNAGIF---RTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAEL 201
           A+  A V+     G I+          + +    N P    Y  SK     L ++L AEL
Sbjct: 113 ARAFAPVLAANGGGAIV-------NVLS-VLSWVNFPNLGTYSASKAAAWSLTQALRAEL 164

Query: 202 GRYGIRV--------DCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYV 243
              G RV        D        A   + A +A   L  +   D+    
Sbjct: 165 APQGTRVLGVHPGPIDTDMAAGLDAPKASPADVARQILDALEAGDEEVLP 214

Length = 238

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 23/198 (11%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           + G+  +I G A+   I    A+     GA++      D L    + LA +LG   V   
Sbjct: 8   MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG-AFVA-G 65

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNS---GCNLEYRGFVSILDTPKSDLERLLAVN 135
           HCDV++E  +  + +T   K+GKLD +V++       E  G    +DT + +    + ++
Sbjct: 66  HCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTG--RYVDTSRDNFTMTMDIS 123

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLV 194
                 VA+ A ++M     G IL  T  G            +P  N  GV+K  +   V
Sbjct: 124 VYSFTAVAQRAEKLMTDG--GSILTLTYYGAEKV--------MPHYNVMGVAKAALEASV 173

Query: 195 KSLAAELGRYGIRVDCVS 212
           K LA +LG   IRV+ +S
Sbjct: 174 KYLAVDLGPKNIRVNAIS 191

Length = 272

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 41/190 (21%), Positives = 76/190 (40%), Gaps = 18/190 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCD 81
           +  G   +ITGGASGIG + A+ F + G  V+I    ++ L +A A    + ++    CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKA---ENPEIHTEVCD 58

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++      LV+    ++  L++L+N+             D    D E+ +A N +    
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLD-DAEQEIATNLLAPIR 117

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP---ANYYGVSKFGILGLVKSLA 198
           +       ++ +    I+  +           GL  +P      Y  +K  I     +L 
Sbjct: 118 LTALLLPHLLRQPEATIINVS----------SGLAFVPMASTPVYCATKAAIHSYTLALR 167

Query: 199 AELGRYGIRV 208
            +L    + V
Sbjct: 168 EQLKDTSVEV 177

Length = 245

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 42/191 (21%), Positives = 78/191 (40%), Gaps = 17/191 (8%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSN 84
            +A++T      G ++A+   ++G  VV  D       + AD    Q  +         +
Sbjct: 2   SIALVTHARHFAGPASAEALTEDGYTVVCHD------ASFADAAERQAFESENPGTKALS 55

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
           E++   LVD  +   G +D+LV++  +   R    I  T ++D+ +     +I  F + +
Sbjct: 56  EQKPEELVDAVLQAGGAIDVLVSN--DYIPRPMNPIDGTSEADIRQAFEALSIFPFALLQ 113

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
            A   M     G I++ T     +    + L       YG ++   + L +SLA EL R 
Sbjct: 114 AAIAQMKKAGGGSIIFIT-----SAVPKKPLAYNSL--YGPARAAAVALAESLAKELSRD 166

Query: 205 GIRVDCVSHTY 215
            I V  +   +
Sbjct: 167 NILVYAIGPNF 177

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 46.5 bits (111), Expect = 4e-06
 Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 36/190 (18%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQ-----DNLGQALADKLGHQDVCYIHCDVSN 84
           +ITG  SG G   A    + G  V IA VQ       L    A              ++ 
Sbjct: 6   LITGAGSGFGREVALRLARKGHNV-IAGVQIAPQVTALRAEAAR-----------RGLAL 53

Query: 85  EREVINLVDTT-VAKFGKL--DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
             E ++L D    A+  +   D+L+N+    E  G  +++D P   +  L   N  G   
Sbjct: 54  RVEKLDLTDAIDRAQAAEWDVDVLLNNAGIGE-AG--AVVDIPVELVRELFETNVFGPLE 110

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV---SKFGILGLVKSLA 198
           + +   R MV R +G +++T+           GL   P  + G    SK  +  + +++ 
Sbjct: 111 LTQGFVRKMVARGKGKVVFTSSMA--------GLITGP--FTGAYCASKHALEAIAEAMH 160

Query: 199 AELGRYGIRV 208
           AEL  +GI+V
Sbjct: 161 AELKPFGIQV 170

Length = 257

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 31/181 (17%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
            RV ++ GG   +G++  Q F   G  V   D+ +N            D   I  D  + 
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASIDLAEN---------EEADASIIVLDSDSF 51

Query: 86  REVINLVDTTVAK-FGKLDILVN-----SGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            E    V  +VA+  GK+D L+      +G + + + FV   D        +   N    
Sbjct: 52  TEQAKQVVASVARLSGKVDALICVAGGWAGGSAKSKSFVKNWD-------LMWKQNLWTS 104

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F+ +  A + +     G +L  TG    A   +E    +    YG +K  +  L +SLAA
Sbjct: 105 FIASHLATKHL---LSGGLLVLTG----AKAALEPTPGMIG--YGAAKAAVHQLTQSLAA 155

Query: 200 E 200
           E
Sbjct: 156 E 156

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 18/185 (9%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE 87
           + ++TG  +G G    + F + G KV+    +    Q L D+LG   +     DV N   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDN-LYIAQLDVRNRAA 60

Query: 88  VINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA 146
           +  ++ +  A++  +D+LV N+G  L   G          D E ++  N  G   + +  
Sbjct: 61  IEEMLASLPAEWRNIDVLVNNAGLAL---GLEPAHKASVEDWETMIDTNNKGLVYMTRAV 117

Query: 147 ARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP---ANYYGVSKFGILGLVKSLAAELGR 203
              MV R  G I+     G+TA        + P    N YG +K  +     +L  +L  
Sbjct: 118 LPGMVERNHGHII---NIGSTA-------GSWPYAGGNVYGATKAFVRQFSLNLRTDLHG 167

Query: 204 YGIRV 208
             +RV
Sbjct: 168 TAVRV 172

Length = 248

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 51/195 (26%), Positives = 81/195 (41%), Gaps = 26/195 (13%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKV--VIADV-----QDNLGQALADKLGHQDVCYIH 79
            V +ITG +SGIG   A     + +K   V A +     +  L +A     G   +  + 
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAG-GTLETLQ 59

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSD-LERLLAVNTI 137
            DV + + V   V+        +D+LV N+G      G +  L+    D +  +  VN  
Sbjct: 60  LDVCDSKSVAAAVERV--TERHVDVLVCNAGV-----GLLGPLEALSEDAMASVFDVNVF 112

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKS 196
           G   + +     M  R  G IL T+  G        GL  +P N  Y  SKF + GL +S
Sbjct: 113 GTVRMLQAFLPDMKRRGSGRILVTSSVG--------GLQGLPFNDVYCASKFALEGLCES 164

Query: 197 LAAELGRYGIRVDCV 211
           LA +L  + + +  +
Sbjct: 165 LAVQLLPFNVHLSLI 179

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 45.0 bits (107), Expect = 1e-05
 Identities = 53/186 (28%), Positives = 76/186 (40%), Gaps = 21/186 (11%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           R  +ITG +SGIGA  A+    +G + V A  +     A    L  + +     D +   
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVA---ALEAEGLEAFQLDYAEPE 60

Query: 87  EVINLVDTTVAKF-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
            +  LV   +    G+LD L N+G    Y    ++ D P   L      N  G   + + 
Sbjct: 61  SIAALVAQVLELSGGRLDALFNNGA---YGQPGAVEDLPTEALRAQFEANFFGWHDLTRR 117

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLVKSLAAELG 202
              VM  + +G I+         C+ I GL  +P  Y   Y  SKF I GL  +L  EL 
Sbjct: 118 VIPVMRKQGQGRIVQ--------CSSILGL--VPMKYRGAYNASKFAIEGLSLTLRMELQ 167

Query: 203 RYGIRV 208
             GI V
Sbjct: 168 GSGIHV 173

Length = 277

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 45.0 bits (106), Expect = 1e-05
 Identities = 58/210 (27%), Positives = 78/210 (37%), Gaps = 32/210 (15%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIA------------DVQDNLGQALADKLGHQD 74
           R+A +TGG  GIG S  Q  HK+G KVV              + Q  LG       G   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG--- 60

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
                 +V +        D   A+ G++D+LVN   N      V      + D   ++  
Sbjct: 61  ------NVGDWDSTKAAFDKVKAEVGEIDVLVN---NAGITRDVVFRKMTREDWTAVIDT 111

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           N    F V K     MV R  G I+  +                    Y  +K GI G  
Sbjct: 112 NLTSLFNVTKQVIDGMVERGWGRIINISSVNGQK-------GQFGQTNYSTAKAGIHGFT 164

Query: 195 KSLAAELGRYGIRVDCVSHTY-GLAMAEAI 223
            SLA E+   G+ V+ VS  Y G  M +AI
Sbjct: 165 MSLAQEVATKGVTVNTVSPGYIGTDMVKAI 194

Length = 246

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 45.1 bits (107), Expect = 1e-05
 Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 23/184 (12%)

Query: 31  ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD-KLGHQDVCYI-HCDVSNEREV 88
           ITG +SG G    +     G +V  A V+     AL D K  + D  ++   DV++   V
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVA-ATVRRP--DALDDLKARYGDRLWVLQLDVTDSAAV 63

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
             +VD   A  G++D++V+   N  Y  F +  +   + + R +  N IG         R
Sbjct: 64  RAVVDRAFAALGRIDVVVS---NAGYGLFGAAEELSDAQIRRQIDTNLIGSI----QVIR 116

Query: 149 VMVPRRR----GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
             +P  R    G I+  +  G         L       Y  +K+GI G V+++A E+  +
Sbjct: 117 AALPHLRRQGGGRIVQVSSEGGQIAYPGFSL-------YHATKWGIEGFVEAVAQEVAPF 169

Query: 205 GIRV 208
           GI  
Sbjct: 170 GIEF 173

Length = 276

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 34/203 (16%)

Query: 24  LQGRVAIITG--GASGIGASAAQLFHKNGAKVVIA--DVQDNLGQALADKLGHQDVCYIH 79
           L+G+  ++TG    S I    A++  + GA+VV+        L + +A +L  +    + 
Sbjct: 5   LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLE 63

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNS---------GCNLEYRGFVSILDTPKSDLER 130
            DV+NE  + +L D        LD +V+S         G N         LD P  D+  
Sbjct: 64  LDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNF--------LDAPWEDVAT 115

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFG 189
            L V+      +AK    +M     G I+      T A          PA ++ GV+K  
Sbjct: 116 ALHVSAYSLKSLAKALLPLM--NEGGSIVGLDFDATVA---------WPAYDWMGVAKAA 164

Query: 190 ILGLVKSLAAELGRYGIRVDCVS 212
           +    + LA +LG  GIRV+ V+
Sbjct: 165 LESTNRYLARDLGPRGIRVNLVA 187

Length = 256

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 44.8 bits (106), Expect = 1e-05
 Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 14/189 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ--DVCYIHC 80
           L G++A  T  + GIG   A++  + GA V++ +  ++NL +A          DV YI  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D++ +RE +      +   G+ DI   S    +   F   ++    D E  + +      
Sbjct: 66  DLT-KREDLERTVKELKNIGEPDIFFFSTGGPKPGYF---MEMSMEDWEGAVKLLLYPAV 121

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            + +     M  +  G I+Y+T          E + NI  +   V +  + GLV++LA E
Sbjct: 122 YLTRALVPAMERKGFGRIIYSTSVAIK-----EPIPNIALS--NVVRISMAGLVRTLAKE 174

Query: 201 LGRYGIRVD 209
           LG  GI V+
Sbjct: 175 LGPKGITVN 183

Length = 263

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 24/196 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCD 81
           RL+G+   I G + G+G + A    K GA+V I    +N  + +   L  + ++ Y+  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 82  VSNEREVINLVDTTVAKFGKLDIL-VNSGCNLEYRGFVSILDTPK--SDLERLLAVNTIG 138
           VS+     N+++        +D L V  G  +E        DT +  S LE +L  N I 
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE--------DTVEEFSGLEEMLT-NHIK 112

Query: 139 GFLVAKHAARVMVPRRRGCILYTT--GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
             L A +A+   +      +L ++  G    +  ++          Y V+K G+   V+ 
Sbjct: 113 IPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLS---------YAVAKAGLAKAVEI 163

Query: 197 LAAELGRYGIRVDCVS 212
           LA+EL   GIRV+ ++
Sbjct: 164 LASELLGRGIRVNGIA 179

Length = 238

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 45.1 bits (107), Expect = 2e-05
 Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 10/87 (11%)

Query: 26  GRVAIITGGASGIGAS-AAQLFHKNGAKVV------IADVQDNLGQALA--DKLGHQDVC 76
           G V ++TGGA GIG + A  L  + GA++V      +   ++   Q LA  + LG   V 
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALG-ARVL 263

Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLD 103
           YI  DV++   V  L++    ++G +D
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAID 290

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 28/123 (22%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G+ AI+TGG SG+G    +   + GA V++   + ++ +     +   +V  +  D++
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVML--DLA 81

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD-LERLLAVNTIGGFLV 142
           +   V    +  +    ++DIL+N+       G ++  +T   D  E   A N +G F +
Sbjct: 82  DLESVRAFAERFLDSGRRIDILINNA------GVMACPETRVGDGWEAQFATNHLGHFAL 135

Query: 143 AKH 145
              
Sbjct: 136 VNL 138

Length = 315

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 44.4 bits (105), Expect = 2e-05
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 17/125 (13%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIA--DVQ--DNLGQALADKLGHQDVCYIHCD 81
           G+  IITG  +GIG   A+   + GA+V++A  D+   +     +     + +V   H D
Sbjct: 1   GKTVIITGANTGIGKETARELARRGARVIMACRDMAKCEEAAAEIRRDTLNHEVIVRHLD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKS----DLERLLAVNTI 137
           +++ + +       +A+  +LD+L+N+           ++  P S      E    VN +
Sbjct: 61  LASLKSIRAFAAEFLAEEDRLDVLINNA---------GVMRCPYSKTEDGFEMQFGVNHL 111

Query: 138 GGFLV 142
           G FL+
Sbjct: 112 GHFLL 116

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 37/197 (18%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC-----YIHCDVSN 84
           +ITG  SG G   A+     G  V +A          A +L  + VC      +  DV+ 
Sbjct: 4   LITGCDSGFGNLLAKKLDSLGFTV-LAGCL-TKNGPGAKEL--RRVCSDRLRTLQLDVTK 59

Query: 85  EREVINLVDTTVAKFGKLDI--LVNSGCNLEYRGFVSILD-TPKSDLERLLAVNTIGGFL 141
             ++           G+  +  LVN   N    GF    +  P  D  + + VN  G   
Sbjct: 60  PEQIKRAAQWVKEHVGEKGLWGLVN---NAGILGFGGDEELLPMDDYRKCMEVNLFGTVE 116

Query: 142 VAKHAARVMVP---RRRGCILY-TTGTGTTACTEIEGLCNIPANY---YGVSKFGILGLV 194
           V K      +P   R +G ++  ++  G            +P      Y  SK  +    
Sbjct: 117 VTKA----FLPLLRRAKGRVVNVSSMGGR-----------VPFPAGGAYCASKAAVEAFS 161

Query: 195 KSLAAELGRYGIRVDCV 211
            SL  EL  +G++V  +
Sbjct: 162 DSLRRELQPWGVKVSII 178

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 19/196 (9%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           ++G+  +I G A+   I    A+   + GA++    + + L    + +A +LG   V   
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYV--Y 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV-SILDTPKSDLERLLAVNTI 137
             DVS      +L ++     GK+D +V+S           S L+T K      +A+   
Sbjct: 61  ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFN--IAMEIS 118

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKS 196
              L+    A + +      +L  +  G        G+  +P  N  GV+K  +   V+ 
Sbjct: 119 VYSLIELTRALLPLLNDGASVLTLSYLG--------GVKYVPHYNVMGVAKAALESSVRY 170

Query: 197 LAAELGRYGIRVDCVS 212
           LA +LG+ GIRV+ +S
Sbjct: 171 LAVDLGKKGIRVNAIS 186

Length = 274

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 43.9 bits (104), Expect = 3e-05
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDV-CYIHC 80
            L G+  +ITG + GIGA+AA+ F   G  + + A   D L    AD      V   +H 
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 81  -DVSNEREVINLVDTTVAKFGKLDILVN 107
            D+S+      L     A+ G +DILVN
Sbjct: 64  LDLSSPEAREQL----AAEAGDIDILVN 87

Length = 259

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 8/137 (5%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVI--ADVQDNLGQALADKLGH--QDVCYIHCDV 82
           R A++TG A  IG + A     +G  V +     +D   +ALA ++    +    +  D+
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE-AEALAAEIRALGRRAVALQADL 68

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++E EV  LV    A  G + +LVN+    EY    S     ++  +R +A N    F++
Sbjct: 69  ADEAEVRALVARASAALGPITLLVNNASLFEYD---SAASFTRASWDRHMATNLRAPFVL 125

Query: 143 AKHAARVMVPRRRGCIL 159
           A+  AR +    RG ++
Sbjct: 126 AQAFARALPADARGLVV 142

Length = 258

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 43.8 bits (104), Expect = 3e-05
 Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 26/187 (13%)

Query: 31  ITGGASGIGASAAQLFHKNGAKV-VIADVQDNLGQALADKLGHQDVCYIHC-DVSNEREV 88
           ITG +SGIG + A+ + + GA + ++A   D L QA A +L       ++  DV +   +
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDAL-QAFAARLPKAARVSVYAADVRDADAL 65

Query: 89  INLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLE---RLLAVNTIGGFLVAK 144
                  +A  G  D+++ N+G +      V  L   + DL     ++  N  G  +VA 
Sbjct: 66  AAAAADFIAAHGLPDVVIANAGIS------VGTLTEEREDLAVFREVMDTNYFG--MVAT 117

Query: 145 HAARV--MVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAEL 201
               +  M   RRG ++   G  + A   + GL   P A  Y  SK   +  ++SL  EL
Sbjct: 118 FQPFIAPMRAARRGTLV---GIASVA--GVRGL---PGAGAYSASKAAAIKYLESLRVEL 169

Query: 202 GRYGIRV 208
              G+RV
Sbjct: 170 RPAGVRV 176

Length = 257

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 43.2 bits (102), Expect = 5e-05
 Identities = 49/231 (21%), Positives = 82/231 (35%), Gaps = 35/231 (15%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           ++ +  ++TG   GIG +  +    +GAK V A V+D    A         V  +  DV+
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKYGDKVVPLRLDVT 60

Query: 84  NEREVINLVDTTVAKFGKLDILVN-----SGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           +   +        A+   +D+++N         L   G +         L++ + VN  G
Sbjct: 61  DPESIKAA----AAQAKDVDVVINNAGVLKPATLLEEGAL-------EALKQEMDVNVFG 109

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSL 197
              +A+  A V+     G I+            +  L N PA   Y  SK     L + L
Sbjct: 110 LLRLAQAFAPVLKANGGGAIV--------NLNSVASLKNFPAMGTYSASKSAAYSLTQGL 161

Query: 198 AAELGRYGIRVDCV---------SHTYGLAMAEAIASIANAALYNMAKDDD 239
            AEL   G  V  V         +   G        ++A A L  +   + 
Sbjct: 162 RAELAAQGTLVLSVHPGPIDTRMAAGAGGPKESPE-TVAEAVLKALKAGEF 211

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|180983 PRK07453, PRK07453, protochlorophyllide oxidoreductase; Validated

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 53/166 (31%), Positives = 71/166 (42%), Gaps = 20/166 (12%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDV 82
           +G V IITG +SG+G  AA+   K G  V++A       +A A +LG        IH D+
Sbjct: 6   KGTV-IITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDL 64

Query: 83  SNEREVINLVDTTVAKFGK-LDILVNSGCNLEYRGFVSILDTPK---SDLERLLAVNTIG 138
            +   V   VD      GK LD LV   CN     ++ +L  P       E  +A N +G
Sbjct: 65  GDLDSVRRFVD-DFRALGKPLDALV---CNAAV--YMPLLKEPLRSPQGYELSMATNHLG 118

Query: 139 GFLVAK----HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA 180
            FL+         +   P  R  IL   GT T    E+ G   IPA
Sbjct: 119 HFLLCNLLLEDLKKSPAPDPRLVIL---GTVTANPKELGGKIPIPA 161

Length = 322

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 42.9 bits (101), Expect = 6e-05
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 16/79 (20%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVI 89
           +ITG ASGIGA+ A+L    G  V+  D+++                 +  D+S      
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLRE---------------ADVIADLSTPEGRA 47

Query: 90  NLVDTTVAKFGK-LDILVN 107
             +   +A+    LD LVN
Sbjct: 48  AAIADVLARCSGVLDGLVN 66

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.7 bits (100), Expect = 7e-05
 Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 30/221 (13%)

Query: 24  LQGRVAIITGGASGIGAS--AAQLFHKNGAKVVI---ADVQDNLGQALADKLGHQDVCYI 78
           LQG+  +ITG A+ +  S   AQL  K+GA++     ++V +   + LA+++G   V  +
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSEL 65

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGC---NLEYRGFVSILDTPKSDLERLLAVN 135
             DV+N + + NL D    K+G  D L++        E +G    +DT   +    L ++
Sbjct: 66  --DVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKG--RYVDTSLENFHNSLHIS 121

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLV 194
                 +++ A  +M     G I+  T  G            IP  N  GV+K  +   V
Sbjct: 122 CYSLLELSRSAEALM--HDGGSIVTLTYYGAEKV--------IPNYNVMGVAKAALEASV 171

Query: 195 KSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMA 235
           K LA ++G   IRV+ +S       A  I ++A++A+ + +
Sbjct: 172 KYLANDMGENNIRVNAIS-------AGPIKTLASSAIGDFS 205

Length = 260

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 24/171 (14%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCY--IHC 80
            Q    IITG +SG+G  AA+     G   VI   +D L  +  A  LG     Y  +H 
Sbjct: 1   QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHL 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPK---SDLERLLAVNTI 137
           D+ +   V   V         LD LV   CN     +      P+      E  +  N +
Sbjct: 61  DLGSLDSVRQFVQQFRESGRPLDALV---CNAAV--YFPTAKEPRFTADGFELSVGTNHL 115

Query: 138 GGFLVA-------KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           G FL+        K++       +R  I+  + TG T    + G     AN
Sbjct: 116 GHFLLCNLLLDDLKNSPN---KDKR-LIIVGSITGNT--NTLAGNVPPKAN 160

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 50/202 (24%), Positives = 81/202 (40%), Gaps = 29/202 (14%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQ---ALADKLGHQDVCYI 78
           LQG+  +ITG  S   I    A+   + GA++    V D L +    +A +L  + V   
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELV--F 61

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV-------SILDTPKSDLERL 131
            CDV+++ E+  +       +  LD LV+S       GF          LD+   +    
Sbjct: 62  RCDVASDDEINQVFADLGKHWDGLDGLVHS------IGFAPKEALSGDFLDSISREAFNT 115

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGI 190
               +         AAR M+  R   I+  +  G            IP  N  G++K  +
Sbjct: 116 AHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRA--------IPNYNVMGMAKASL 167

Query: 191 LGLVKSLAAELGRYGIRVDCVS 212
              ++  AA LG+ GIR + +S
Sbjct: 168 EAGIRFTAACLGKEGIRCNGIS 189

Length = 261

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 44/209 (21%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-------------LADKL 70
           L+G+VA++ G   G G   A      GA V +        ++             L    
Sbjct: 6   LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA 65

Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS--GCNLEYRGFVSILDTP--KS 126
           G + +  +  D     +V  LV+    + G+LDILVN   G        +     P  + 
Sbjct: 66  GGRGIA-VQVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEK-----LFEWGKPVWEH 119

Query: 127 DLE---RLL--AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
            L+   R+L  A++T    + +  A  +++ R  G ++  T  GT              +
Sbjct: 120 SLDKGLRMLRLAIDT--HLITSHFALPLLIRRPGGLVVEIT-DGTAEYNA--------TH 168

Query: 182 Y-----YGVSKFGILGLVKSLAAELGRYG 205
           Y     Y ++K  +  L  SLA EL  +G
Sbjct: 169 YRLSVFYDLAKTSVNRLAFSLAHELAPHG 197

Length = 305

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 40.7 bits (95), Expect = 4e-04
 Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 13/123 (10%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVC-YIHCD 81
           G+V IITG  SGIG   A+ F  +GA V++A    +   A   ++    H+     +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSG-CNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           +++ R V    +   AK   L +LV N+    L +          +  LE    VN +G 
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALPWT-------LTEDGLETTFQVNHLGH 113

Query: 140 FLV 142
           F +
Sbjct: 114 FYL 116

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|187568 cd05258, CDP_TE_SDR_e, CDP-tyvelose 2-epimerase, extended (e) SDRs

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 27 RVAIITGGASGIGASAAQLFHKNGAKVVIAD------VQDNLGQALADKLGHQDVCYIHC 80
             +ITGGA  IG++ A+ F K G +V+  D         NL   L        V ++H 
Sbjct: 1  MRVLITGGAGFIGSNLARFFLKQGWEVIGFDNLMRRGSFGNLAW-LKANREDGGVRFVHG 59

Query: 81 DVSN 84
          D+ N
Sbjct: 60 DIRN 63

CDP-tyvelose 2-epimerase is a tetrameric SDR that catalyzes the conversion of CDP-D-paratose to CDP-D-tyvelose, the last step in tyvelose biosynthesis. This subgroup is a member of the extended SDR subfamily, with a characteristic active site tetrad and NAD-binding motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 337

>gnl|CDD|133444 cd01075, NAD_bind_Leu_Phe_Val_DH, NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

 Score = 38.0 bits (89), Expect = 0.002
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 24 LQGRVAIITG-GASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV 75
          L+G+   + G G   +G   A+   + GAK+++AD+ +      A+  G   V
Sbjct: 26 LEGKTVAVQGLGK--VGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATVV 76

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an alpha-beta-alpha configuration. NAD binding involves numerous hydrogen and van der Waals contacts. Length = 200

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 38.0 bits (88), Expect = 0.002
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 22/91 (24%)

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCVS----HTYGLAMAEAI--------------- 223
           Y  +K G++G  K+LA EL +  I V+C++     T  LA  E                 
Sbjct: 149 YSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLDEALKTVPMNRMGQ 208

Query: 224 -ASIANAALYNMAKDDDTSYVGKQNLLVNGG 253
            A +A+ A + M+  D  SYV +Q + VNGG
Sbjct: 209 PAEVASLAGFLMS--DGASYVTRQVISVNGG 237

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 37.9 bits (88), Expect = 0.002
 Identities = 42/174 (24%), Positives = 69/174 (39%), Gaps = 21/174 (12%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
           A+I G   GIG + A+     G +++++         LA ++G         DV+ E EV
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALARP---ADVAAELEV 57

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
             L      + G LD+LV +   +  +    +  T  +   R+L  N  G  LV KHA  
Sbjct: 58  WALAQ----ELGPLDLLVYAAGAILGK---PLARTKPAAWRRILDANLTGAALVLKHALA 110

Query: 149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAEL 201
           ++    R   L        A  E   L  +P  + Y  +K  +   V+    E+
Sbjct: 111 LLAAGARLVFL-------GAYPE---LVMLPGLSAYAAAKAALEAYVEVARKEV 154

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 37.5 bits (88), Expect = 0.002
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 10/82 (12%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVI--------ADVQDNLGQALADKLGHQDVCYIHCD 81
           +ITGG  G+G + A+   + GA+ ++        A     L   L        V  + CD
Sbjct: 4   LITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGAR--VTVVACD 61

Query: 82  VSNEREVINLVDTTVAKFGKLD 103
           V++   +  ++    A  G L 
Sbjct: 62  VADRDALAAVLAAIPAVEGPLT 83

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score = 37.7 bits (88), Expect = 0.004
 Identities = 17/69 (24%), Positives = 27/69 (39%), Gaps = 1/69 (1%)

Query: 18  LSSYYRLQ-GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC 76
           L     L+ G   ++ G A G+G++A QL    GA VV         + L +      + 
Sbjct: 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHVIN 193

Query: 77  YIHCDVSNE 85
           Y   D   +
Sbjct: 194 YREEDFVEQ 202

Length = 326

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 37.5 bits (87), Expect = 0.004
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 27/133 (20%)

Query: 31  ITGGASGIGASAAQLFHKNGAKVVI--------ADVQDNLGQALADKLGHQDVCYIHCDV 82
           ITG + G+G +AA+     G +VV+        AD +     A    +G         D+
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---------DL 62

Query: 83  SNEREVINLVDTTVAKFGKLD-ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           S+  E   L D  V   G+ D ++ N+G  +         DT    +  ++AVN +  ++
Sbjct: 63  SSLAETRKLAD-QVNAIGRFDAVIHNAG--ILSGPNRKTPDT---GIPAMVAVNVLAPYV 116

Query: 142 VAKHAARVMVPRR 154
           +    A +  P+R
Sbjct: 117 L---TALIRRPKR 126

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.98
PLN02780	320	ketoreductase/ oxidoreductase	99.98
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
PRK10538	248	malonic semialdehyde reductase; Provisional	99.98
PRK05993	277	short chain dehydrogenase; Provisional	99.98
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.98
PRK07454	241	short chain dehydrogenase; Provisional	99.98
PRK12829	264	short chain dehydrogenase; Provisional	99.98
PRK06197	306	short chain dehydrogenase; Provisional	99.98
PRK07832	272	short chain dehydrogenase; Provisional	99.98
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.98
COG1028	251	FabG Dehydrogenases with different specificities (	99.98
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.97
PRK05855	582	short chain dehydrogenase; Validated	99.97
PRK09072	263	short chain dehydrogenase; Provisional	99.97
PRK08324	681	short chain dehydrogenase; Validated	99.97
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.97
PRK06924	251	short chain dehydrogenase; Provisional	99.97
PRK07806	248	short chain dehydrogenase; Provisional	99.97
PRK06180	277	short chain dehydrogenase; Provisional	99.97
PRK07904	253	short chain dehydrogenase; Provisional	99.97
PRK08267	260	short chain dehydrogenase; Provisional	99.97
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK06194	287	hypothetical protein; Provisional	99.97
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.97
PRK06914	280	short chain dehydrogenase; Provisional	99.97
PRK06179	270	short chain dehydrogenase; Provisional	99.97
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
PRK08263	275	short chain dehydrogenase; Provisional	99.97
PRK05650	270	short chain dehydrogenase; Provisional	99.97
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.97
KOG1208	314	consensus Dehydrogenases with different specificit	99.97
PRK08251	248	short chain dehydrogenase; Provisional	99.97
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.97
PRK07041	230	short chain dehydrogenase; Provisional	99.97
PRK07775	274	short chain dehydrogenase; Provisional	99.97
PRK07578	199	short chain dehydrogenase; Provisional	99.97
PRK06482	276	short chain dehydrogenase; Provisional	99.97
PRK05693	274	short chain dehydrogenase; Provisional	99.97
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.97
PRK09135	249	pteridine reductase; Provisional	99.97
PRK07102	243	short chain dehydrogenase; Provisional	99.97
PRK08177	225	short chain dehydrogenase; Provisional	99.96
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.96
PRK07326	237	short chain dehydrogenase; Provisional	99.96
PRK07201	657	short chain dehydrogenase; Provisional	99.96
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.96
PRK06181	263	short chain dehydrogenase; Provisional	99.96
PRK06101	240	short chain dehydrogenase; Provisional	99.96
PRK07023	243	short chain dehydrogenase; Provisional	99.96
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.95
PRK06953	222	short chain dehydrogenase; Provisional	99.95
PRK08264	238	short chain dehydrogenase; Validated	99.95
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.95
PRK09291	257	short chain dehydrogenase; Provisional	99.95
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.95
PRK12367	245	short chain dehydrogenase; Provisional	99.95
PRK08017	256	oxidoreductase; Provisional	99.95
PRK08219	227	short chain dehydrogenase; Provisional	99.93
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.92
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.88
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.88
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.87
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.87
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.84
PLN03209	576	translocon at the inner envelope of chloroplast su	99.84
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.83
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.82
PLN02653	340	GDP-mannose 4,6-dehydratase	99.81
PRK06720	169	hypothetical protein; Provisional	99.81
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.8
PLN02572	442	UDP-sulfoquinovose synthase	99.79
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.79
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.78
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.78
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.77
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.77
PLN00198	338	anthocyanidin reductase; Provisional	99.77
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.77
PLN02650	351	dihydroflavonol-4-reductase	99.77
PLN02583	297	cinnamoyl-CoA reductase	99.76
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.75
PLN02214	342	cinnamoyl-CoA reductase	99.74
PLN02240	352	UDP-glucose 4-epimerase	99.74
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.74
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.73
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.73
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.72
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.71
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.71
PLN02686	367	cinnamoyl-CoA reductase	99.68
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.66
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.66
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.66
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.66
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.65
PLN02260	668	probable rhamnose biosynthetic enzyme	99.65
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.64
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.64
PLN02427	386	UDP-apiose/xylose synthase	99.64
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.6
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.58
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.57
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.56
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.53
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.52
PLN02206	442	UDP-glucuronate decarboxylase	99.52
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.51
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.49
CHL00194	317	ycf39 Ycf39; Provisional	99.49
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.48
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.48
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.45
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.41
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.41
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.41
PLN02778	298	3,5-epimerase/4-reductase	99.4
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.38
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.38
PRK07201	657	short chain dehydrogenase; Provisional	99.38
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.36
PLN02996	491	fatty acyl-CoA reductase	99.35
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.33
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.25
PLN02260	668	probable rhamnose biosynthetic enzyme	99.24
PRK05865	854	hypothetical protein; Provisional	99.24
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.2
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.14
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.12
PLN02503	605	fatty acyl-CoA reductase 2	99.12
PRK08309	177	short chain dehydrogenase; Provisional	99.11
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.07
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.06
PLN00016	378	RNA-binding protein; Provisional	99.05
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.05
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.03
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	98.98
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	98.89
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.77
PRK12320	699	hypothetical protein; Provisional	98.75
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.73
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.61
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.59
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.47
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.44
COG2910	211	Putative NADH-flavin reductase [General function p	98.44
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.38
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.24
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.22
PLN00106	323	malate dehydrogenase	98.21
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.2
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.19
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.13
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.12
KOG2774	366	consensus NAD dependent epimerase [General functio	98.12
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.11
PRK09620	229	hypothetical protein; Provisional	98.09
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.08
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.08
PTZ00325	321	malate dehydrogenase; Provisional	98.05
PRK14982	340	acyl-ACP reductase; Provisional	97.88
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.82
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	97.74
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.73
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.64
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.6
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.53
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.52
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.5
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.5
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.39
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.37
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.37
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.31
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.27
PRK05086	312	malate dehydrogenase; Provisional	97.26
PRK06849	389	hypothetical protein; Provisional	97.22
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.19
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.15
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.13
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	97.12
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.11
COG0569	225	TrkA K+ transport systems, NAD-binding component [	97.06
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.03
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.98
PRK13940	414	glutamyl-tRNA reductase; Provisional	96.98
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.95
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.95
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	96.91
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.87
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	96.86
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.85
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.85
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	96.85
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	96.84
PRK04148	134	hypothetical protein; Provisional	96.78
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.73
PRK09496	453	trkA potassium transporter peripheral membrane com	96.68
COG3268	382	Uncharacterized conserved protein [Function unknow	96.67
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.66
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.66
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.61
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.6
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.59
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.58
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.56
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.56
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.53
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.53
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	96.52
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.51
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.48
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.42
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.4
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.39
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.35
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	96.35
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.33
PRK09496	453	trkA potassium transporter peripheral membrane com	96.31
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.28
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.28
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.26
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.26
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.25
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.22
PLN00203	519	glutamyl-tRNA reductase	96.19
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	96.14
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.1
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.1
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.06
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.05
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.02
PRK10669	558	putative cation:proton antiport protein; Provision	96.02
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.97
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	95.97
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.95
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.93
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.91
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.91
PTZ00117	319	malate dehydrogenase; Provisional	95.9
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.87
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	95.86
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	95.85
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.82
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.81
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	95.78
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.77
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.76
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	95.75
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.75
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.72
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.71
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.71
PTZ00075	476	Adenosylhomocysteinase; Provisional	95.7
PRK05442	326	malate dehydrogenase; Provisional	95.67
PLN02602	350	lactate dehydrogenase	95.62
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.57
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.56
PLN02928	347	oxidoreductase family protein	95.45
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	95.45
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	95.44
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.4
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.39
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.38
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.34
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.32
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	95.31
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	95.31
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.3
PF02670	129	DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re	95.27
PRK06223	307	malate dehydrogenase; Reviewed	95.23
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	95.21
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.2
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.19
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	95.15
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.08
PRK07574	385	formate dehydrogenase; Provisional	95.04
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	95.02
PRK08328	231	hypothetical protein; Provisional	94.97
PRK03659	601	glutathione-regulated potassium-efflux system prot	94.96
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.95
PRK08223	287	hypothetical protein; Validated	94.94
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	94.88
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.87
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.87
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	94.85
PLN02494	477	adenosylhomocysteinase	94.84
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	94.84
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	94.82
PRK08655	437	prephenate dehydrogenase; Provisional	94.8
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.79
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	94.78
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.78
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	94.77
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.76
PRK14968	188	putative methyltransferase; Provisional	94.75
PRK03562	621	glutathione-regulated potassium-efflux system prot	94.75
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	94.7
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.65
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	94.61
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.56
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	94.55
PLN03139	386	formate dehydrogenase; Provisional	94.54
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.47
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	94.46
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.45
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	94.43
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.41
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	94.41
PLN02740	381	Alcohol dehydrogenase-like	94.4
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	94.31
PRK12480	330	D-lactate dehydrogenase; Provisional	94.31
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.3
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	94.27
PTZ00354	334	alcohol dehydrogenase; Provisional	94.27
PRK05447	385	1-deoxy-D-xylulose 5-phosphate reductoisomerase; P	94.27
PRK02006	498	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.26
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	94.24
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.21
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.2
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.18
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	94.07
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	94.05
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	94.05
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	93.99
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	93.97
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.9
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.81
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	93.8
PF00070	80	Pyr_redox: Pyridine nucleotide-disulphide oxidored	93.79
PRK05479	330	ketol-acid reductoisomerase; Provisional	93.79
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	93.75
PRK13243	333	glyoxylate reductase; Reviewed	93.75
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	93.74
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	93.67
PRK05562	223	precorrin-2 dehydrogenase; Provisional	93.65
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	93.63
PRK10637	457	cysG siroheme synthase; Provisional	93.61
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	93.59
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	93.58
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	93.57
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	93.55
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	93.49
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	93.49
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	93.44
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	93.42
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	93.39

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=6.7e-44  Score=272.32  Aligned_cols=222  Identities=33%  Similarity=0.471  Sum_probs=198.3

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..+++.|+++|||+++|||++++..|+++|++|++.+++....++....++. ++-..+.||+++.++++..+++..+.+
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            3467889999999999999999999999999999999998888888877775 567789999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh--cCCCCCcEEEeccCCCcccccccCcCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM--VPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      |.+++||||||+...   ..+...+.++|++++.+|+.+.|+++|++.+.|  .++.+.+|||+|    +..+..++.+.
T Consensus        89 g~psvlVncAGItrD---~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvs----SIVGkiGN~GQ  161 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRD---GLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVS----SIVGKIGNFGQ  161 (256)
T ss_pred             CCCcEEEEcCccccc---cceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeeh----hhhcccccccc
Confidence            999999999998764   345567999999999999999999999999883  444556999999    66666666555


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~  235 (255)
                         +.|++||+++.+|+|..|+|++++|||||+|.| |++.||                 |   +  +||++..+.||  
T Consensus       162 ---tnYAAsK~GvIgftktaArEla~knIrvN~VlP-GFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~V~fL--  235 (256)
T KOG1200|consen  162 ---TNYAASKGGVIGFTKTAARELARKNIRVNVVLP-GFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANLVLFL--  235 (256)
T ss_pred             ---hhhhhhcCceeeeeHHHHHHHhhcCceEeEecc-ccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHHHHHH--
Confidence               779999999999999999999999999999999 999987                 2   2  99999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +||.++|+||+++-||||+.
T Consensus       236 AS~~ssYiTG~t~evtGGl~  255 (256)
T KOG1200|consen  236 ASDASSYITGTTLEVTGGLA  255 (256)
T ss_pred             hccccccccceeEEEecccc
Confidence            99999999999999999973

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-42  Score=287.52  Aligned_cols=220  Identities=22%  Similarity=0.293  Sum_probs=190.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.   ..++.++.+|++|+++++++++++. .
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            46889999999999999999999999999999999999887777666553   2468899999999999999999985 5


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+    ..+.+.. 
T Consensus        83 ~g~iD~lv~nag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~----~~~~~~~-  154 (263)
T PRK08339         83 IGEPDIFFFSTGGPK---PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI----KEPIPNI-  154 (263)
T ss_pred             hCCCcEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc----cCCCCcc-
Confidence            899999999987543   24567789999999999999999999999999998887899999996542    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IAS  225 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~  225 (255)
                        ..|+++|+|+++|++.++.|++++|||||+|+| |.++|+                               ++  |+|
T Consensus       155 --~~y~asKaal~~l~~~la~el~~~gIrVn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d  231 (263)
T PRK08339        155 --ALSNVVRISMAGLVRTLAKELGPKGITVNGIMP-GIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEE  231 (263)
T ss_pred             --hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-CcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHH
Confidence              569999999999999999999999999999999 766554                               11  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.++.||  +++.+.++||+++.+|||++
T Consensus       232 va~~v~fL--~s~~~~~itG~~~~vdgG~~  259 (263)
T PRK08339        232 IGYLVAFL--ASDLGSYINGAMIPVDGGRL  259 (263)
T ss_pred             HHHHHHHH--hcchhcCccCceEEECCCcc
Confidence            99999999  89999999999999999984

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.9e-42  Score=285.05  Aligned_cols=220  Identities=24%  Similarity=0.279  Sum_probs=186.1

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++||||+  +|||++++++|+++|++|++++|++ ...+..+++...++.++++|++|+++++++++++.+++|
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   82 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG   82 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC
Confidence            4789999999999  7999999999999999999999984 334444444445688899999999999999999999999


Q ss_pred             CccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|.|++  +|+|+++||.++    ..+.+..  
T Consensus        83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~----~~~~~~~--  154 (252)
T PRK06079         83 KIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP--GASIVTLTYFGS----ERAIPNY--  154 (252)
T ss_pred             CCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc--CceEEEEeccCc----cccCCcc--
Confidence            999999998765321 1246678899999999999999999999999999953  589999995432    2222223  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||+|+++|+++++.|++++|||||+|+| |.++|+                      ++  |+|++.++.||  
T Consensus       155 -~~Y~asKaal~~l~~~la~el~~~gI~vn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l--  230 (252)
T PRK06079        155 -NVMGIAKAALESSVRYLARDLGKKGIRVNAISA-GAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFL--  230 (252)
T ss_pred             -hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHH--
Confidence             679999999999999999999999999999999 777654                      11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||+++.+|||++
T Consensus       231 ~s~~~~~itG~~i~vdgg~~  250 (252)
T PRK06079        231 LSDLSTGVTGDIIYVDKGVH  250 (252)
T ss_pred             hCcccccccccEEEeCCcee
Confidence            89999999999999999974

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=286.36  Aligned_cols=219  Identities=22%  Similarity=0.289  Sum_probs=183.2

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .|++|+++||||+  +|||++++++|+++|++|++++|+++   ..+++.+++.. . .++++|++|+++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHH
Confidence            4689999999997  79999999999999999999999853   33334344332 3 6789999999999999999999


Q ss_pred             HcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+|++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|.|++  +|+|+++||.++    ..+.+.
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~g~Iv~isS~~~----~~~~~~  153 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND--GASVLTLSYLGG----VKYVPH  153 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc--CCcEEEEecCCC----ccCCCc
Confidence            999999999998864321 1245678899999999999999999999999999964  489999996532    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                      ++  |+|+++++.|
T Consensus       154 ~---~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~f  229 (274)
T PRK08415        154 Y---NVMGVAKAALESSVRYLAVDLGKKGIRVNAISA-GPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMY  229 (274)
T ss_pred             c---hhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEec-CccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHH
Confidence            2   569999999999999999999999999999999 766553                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||+++.+|||+.
T Consensus       230 L--~s~~~~~itG~~i~vdGG~~  250 (274)
T PRK08415        230 L--LSDLSSGVTGEIHYVDAGYN  250 (274)
T ss_pred             H--hhhhhhcccccEEEEcCccc
Confidence            9  89999999999999999973

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-41  Score=285.92  Aligned_cols=218  Identities=28%  Similarity=0.356  Sum_probs=181.4

Q ss_pred             ecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHH---HHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQA---LADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |++|+++||||++  |||+++|++|+++|++|++++|++...++   +.++.+  ...++++|++|+++++++++++.++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g--~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLG--SDFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcC--CceEEeCCCCCHHHHHHHHHHHHHH
Confidence            6899999999997  99999999999999999999987543322   222222  2357899999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++|||||...... ..++.+.+.++|++++++|+.++++++++++|+|++  +|+||++||.++    ..+.+..
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~G~Iv~isS~~~----~~~~~~~  156 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--GGSMLTLTYGGS----TRVMPNY  156 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--CceEEEEcCCCc----cccCCcc
Confidence            999999999987643211 135667899999999999999999999999999963  489999996532    2222333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l  233 (255)
                         ..|++||+|+.+|+++|+.|++++|||||+|+| |.++|+                      ++  |+|++.+++||
T Consensus       157 ---~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~P-G~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL  232 (271)
T PRK06505        157 ---NVMGVAKAALEASVRYLAADYGPQGIRVNAISA-GPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYL  232 (271)
T ss_pred             ---chhhhhHHHHHHHHHHHHHHHhhcCeEEEEEec-CCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHH
Confidence               569999999999999999999999999999999 666442                      11  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||+++.+|||+.
T Consensus       233 --~s~~~~~itG~~i~vdgG~~  252 (271)
T PRK06505        233 --LSDLSSGVTGEIHFVDSGYN  252 (271)
T ss_pred             --hCccccccCceEEeecCCcc
Confidence              89999999999999999974

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-41  Score=281.17  Aligned_cols=220  Identities=26%  Similarity=0.430  Sum_probs=185.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++.+|+++||||++|||++++++|+++|++|++++|+... ..+..++. ..++.++.+|++++++++++++++.+.+|
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999999886432 22222222 24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.+++.++++++|.|++++ +|+||++||..+    ..+.+..  
T Consensus        83 ~iD~lv~~ag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~----~~~~~~~--  153 (251)
T PRK12481         83 HIDILINNAGIIR---RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS----FQGGIRV--  153 (251)
T ss_pred             CCCEEEECCCcCC---CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh----cCCCCCC--
Confidence            9999999987653   24566788999999999999999999999999997654 589999995532    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||+|++++++.++.|++++|||||+|+| |.++|+                      ++  |+|++.++.||  
T Consensus       154 -~~Y~asK~a~~~l~~~la~e~~~~girvn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L--  229 (251)
T PRK12481        154 -PSYTASKSAVMGLTRALATELSQYNINVNAIAP-GYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFL--  229 (251)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             569999999999999999999999999999999 777654                      11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||+++.+|||+.
T Consensus       230 ~s~~~~~~~G~~i~vdgg~~  249 (251)
T PRK12481        230 SSSASDYVTGYTLAVDGGWL  249 (251)
T ss_pred             hCccccCcCCceEEECCCEe
Confidence            99999999999999999974

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2.7e-41  Score=281.72  Aligned_cols=223  Identities=39%  Similarity=0.556  Sum_probs=191.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-----CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++.+|+++|||+++|||+++|++|++.|++|++++|+++.+++....+.     ..++..+.||+++.++.++++++..
T Consensus         4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~   83 (270)
T KOG0725|consen    4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAV   83 (270)
T ss_pred             ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999998777766543     2468899999999999999999999


Q ss_pred             HH-cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhh-hHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           97 AK-FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI-GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        97 ~~-~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      ++ +|++|++|||||.....  .++.+.+.++|++++++|+. +.+++.+.+.|.+++++++.|+++|+..+..    ..
T Consensus        84 ~~~~GkidiLvnnag~~~~~--~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~----~~  157 (270)
T KOG0725|consen   84 EKFFGKIDILVNNAGALGLT--GSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVG----PG  157 (270)
T ss_pred             HHhCCCCCEEEEcCCcCCCC--CChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccccc----CC
Confidence            99 69999999998776643  26889999999999999999 5778888888888888899999999554322    21


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IAS  225 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~  225 (255)
                      ... + .+|+++|+|++++++++|.||+++|||||+|+| |.+.|+                           ++  |+|
T Consensus       158 ~~~-~-~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~e  234 (270)
T KOG0725|consen  158 PGS-G-VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSP-GLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEE  234 (270)
T ss_pred             CCC-c-ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeec-CcEeCCccccccccchhhHHhhhhccccccccCCccCHHH
Confidence            111 1 469999999999999999999999999999999 655443                           11  999


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++..+.||  +++.++|++|+++.+|||+.
T Consensus       235 va~~~~fl--a~~~asyitG~~i~vdgG~~  262 (270)
T KOG0725|consen  235 VAEAAAFL--ASDDASYITGQTIIVDGGFT  262 (270)
T ss_pred             HHHhHHhh--cCcccccccCCEEEEeCCEE
Confidence            99999999  88887799999999999963

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=3.3e-41  Score=268.81  Aligned_cols=200  Identities=29%  Similarity=0.383  Sum_probs=182.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++|+++|||||+|||.++|++|++.|++|++++|+.++++++.++++...+.++..|++|+++++++++.+.+.++++
T Consensus         3 ~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~i   82 (246)
T COG4221           3 TLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRI   82 (246)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcc
Confidence            35679999999999999999999999999999999999999999999987789999999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||....   .++.+.+.++|++|+++|+.|.++.+++++|.|.+++.|.|||+|    |..+..+.++.   +.
T Consensus        83 DiLvNNAGl~~g---~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~----SiAG~~~y~~~---~v  152 (246)
T COG4221          83 DILVNNAGLALG---DPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLG----SIAGRYPYPGG---AV  152 (246)
T ss_pred             cEEEecCCCCcC---ChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEec----cccccccCCCC---cc
Confidence            999999987652   678889999999999999999999999999999999999999999    54455555555   78


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh-HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA-IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~-~~~~~~~~~~l  233 (255)
                      |+++|+++.+|+..|++|+..++|||.+|.| |.+.+.                      .+ |+++|+++.|.
T Consensus       153 Y~ATK~aV~~fs~~LR~e~~g~~IRVt~I~P-G~v~~~~~s~v~~~g~~~~~~~~y~~~~~l~p~dIA~~V~~~  225 (246)
T COG4221         153 YGATKAAVRAFSLGLRQELAGTGIRVTVISP-GLVETTEFSTVRFEGDDERADKVYKGGTALTPEDIAEAVLFA  225 (246)
T ss_pred             chhhHHHHHHHHHHHHHHhcCCCeeEEEecC-ceecceecccccCCchhhhHHHHhccCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999 766443                      11 99999999998

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-41  Score=280.52  Aligned_cols=222  Identities=31%  Similarity=0.485  Sum_probs=189.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++..  .++.++.+|++++++++++++++.+.+|
T Consensus         6 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   85 (253)
T PRK05867          6 DLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG   85 (253)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999998877777766532  4678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||||+...   ..++.+.+.++|++++++|+.+++++++.++|.|.+++ +++|+++||..+.    ....+ ..
T Consensus        86 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----~~~~~-~~  157 (253)
T PRK05867         86 GIDIAVCNAGIIT---VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH----IINVP-QQ  157 (253)
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc----CCCCC-CC
Confidence            9999999987653   24566788999999999999999999999999997654 5789999854321    11100 01


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhccCC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ...|++||+|+++++++++.|++++|||||+|+| |.++|+                   ++  |+|++++++||  +++
T Consensus       158 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~L--~s~  234 (253)
T PRK05867        158 VSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSP-GYILTELVEPYTEYQPLWEPKIPLGRLGRPEELAGLYLYL--ASE  234 (253)
T ss_pred             ccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeec-CCCCCcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCc
Confidence            2569999999999999999999999999999999 877765                   12  99999999999  999


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||+++.+|||++
T Consensus       235 ~~~~~tG~~i~vdgG~~  251 (253)
T PRK05867        235 ASSYMTGSDIVIDGGYT  251 (253)
T ss_pred             ccCCcCCCeEEECCCcc
Confidence            99999999999999985

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.1e-41  Score=280.36  Aligned_cols=222  Identities=23%  Similarity=0.314  Sum_probs=185.0

Q ss_pred             ceeeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNL---GQALADKLGHQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      +.+++++|+++||||+  +|||++++++|+++|++|++++|+.+.   .+++.++++  ...++++|++|++++++++++
T Consensus         4 ~~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~   81 (258)
T PRK07533          4 PLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELD--APIFLPLDVREPGQLEAVFAR   81 (258)
T ss_pred             cccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhc--cceEEecCcCCHHHHHHHHHH
Confidence            4456899999999998  599999999999999999999998643   334444432  356789999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc
Q 025252           95 TVAKFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~  173 (255)
                      +.+++|++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|+|+  ++|+|+++||.++    ..+
T Consensus        82 ~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~--~~g~Ii~iss~~~----~~~  155 (258)
T PRK07533         82 IAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT--NGGSLLTMSYYGA----EKV  155 (258)
T ss_pred             HHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc--cCCEEEEEecccc----ccC
Confidence            999999999999998764321 124567789999999999999999999999999995  3589999996532    222


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANA  229 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~  229 (255)
                      .+..   ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                      ++  |+|++.+
T Consensus       156 ~~~~---~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~  231 (258)
T PRK07533        156 VENY---NLMGPVKAALESSVRYLAAELGPKGIRVHAISP-GPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAV  231 (258)
T ss_pred             Cccc---hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHH
Confidence            2222   569999999999999999999999999999999 776653                      11  7999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +++++.++||+.+.+|||++
T Consensus       232 ~~~L--~s~~~~~itG~~i~vdgg~~  255 (258)
T PRK07533        232 AAFL--ASDAARRLTGNTLYIDGGYH  255 (258)
T ss_pred             HHHH--hChhhccccCcEEeeCCccc
Confidence            9999  89999999999999999974

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8e-41  Score=278.99  Aligned_cols=222  Identities=24%  Similarity=0.304  Sum_probs=187.3

Q ss_pred             eeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCc---chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQD---NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++.+|+++||||+  +|||++++++|+++|++|++++|+.   +.++++.++++..++.++++|++|+++++++++++.
T Consensus         3 ~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   82 (257)
T PRK08594          3 LSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIK   82 (257)
T ss_pred             cccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHH
Confidence            35789999999997  8999999999999999999987753   445566666544578889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +.+|++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|.|.+  +|+||++||..+    ..+.+
T Consensus        83 ~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~g~Iv~isS~~~----~~~~~  156 (257)
T PRK08594         83 EEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE--GGSIVTLTYLGG----ERVVQ  156 (257)
T ss_pred             HhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc--CceEEEEcccCC----ccCCC
Confidence            9999999999998764321 1245677899999999999999999999999999953  589999996543    22223


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~  231 (255)
                      ..   ..|++||+|+++|+++++.|++++|||||+|+| |.++|+                      ++  |+|+++.+.
T Consensus       157 ~~---~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~  232 (257)
T PRK08594        157 NY---NVMGVAKASLEASVKYLANDLGKDGIRVNAISA-GPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAA  232 (257)
T ss_pred             CC---chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeec-CcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHH
Confidence            33   569999999999999999999999999999999 776653                      12  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+  +++.+.++||+++.+|||++
T Consensus       233 ~l--~s~~~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        233 FL--FSDLSRGVTGENIHVDSGYH  254 (257)
T ss_pred             HH--cCcccccccceEEEECCchh
Confidence            99  99999999999999999974

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.8e-41  Score=279.54  Aligned_cols=218  Identities=26%  Similarity=0.288  Sum_probs=180.2

Q ss_pred             ecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNL---GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||++  |||++++++|+++|++|++.+|++..   .+++.++.  +...++++|++|+++++++++++.+.
T Consensus         6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~--g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEI--GCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhc--CCceEEEccCCCHHHHHHHHHHHHHH
Confidence            6789999999997  99999999999999999999887432   22222222  22346789999999999999999999


Q ss_pred             cCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++||||+..... ...++.+.+.++|++++++|+.+++.+++.++|.|++  +|+||++||.++    ..+.+..
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~--~G~Iv~isS~~~----~~~~~~~  157 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD--GGSIVTLTYYGA----EKVIPNY  157 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc--CceEEEEecCcc----ccCCCcc
Confidence            99999999998754311 1245678899999999999999999999999999953  589999996443    2222223


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l  233 (255)
                         ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                      ++  |+|+++++.||
T Consensus       158 ---~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L  233 (260)
T PRK06603        158 ---NVMGVAKAALEASVKYLANDMGENNIRVNAISA-GPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYL  233 (260)
T ss_pred             ---cchhhHHHHHHHHHHHHHHHhhhcCeEEEEEec-CcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence               669999999999999999999999999999999 766553                      11  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||+++.+|||+.
T Consensus       234 --~s~~~~~itG~~i~vdgG~~  253 (260)
T PRK06603        234 --FSELSKGVTGEIHYVDCGYN  253 (260)
T ss_pred             --hCcccccCcceEEEeCCccc
Confidence              99999999999999999974

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-40  Score=277.95  Aligned_cols=220  Identities=28%  Similarity=0.413  Sum_probs=190.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    ..++.++++|++++++++++++++.+.
T Consensus         4 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (260)
T PRK07063          4 RLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEA   83 (260)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999887777766653    246888999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++|||||....   ....+.+.++|++++++|+.++++++++++|.|++++.++||++||...    ..+.+.. 
T Consensus        84 ~g~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~-  155 (260)
T PRK07063         84 FGPLDVLVNNAGINVF---ADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA----FKIIPGC-  155 (260)
T ss_pred             hCCCcEEEECCCcCCC---CChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh----ccCCCCc-
Confidence            9999999999875432   3445678899999999999999999999999998777899999995432    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAA  230 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~  230 (255)
                        ..|++||++++++++.++.|++++|||||+|+| |.++|+                          ++  |+|++..+
T Consensus       156 --~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~  232 (260)
T PRK07063        156 --FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAP-GYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTA  232 (260)
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEee-CCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence              569999999999999999999999999999999 776553                          11  88999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .||  +++.+.++||+.+.+|||++
T Consensus       233 ~fl--~s~~~~~itG~~i~vdgg~~  255 (260)
T PRK07063        233 VFL--ASDEAPFINATCITIDGGRS  255 (260)
T ss_pred             HHH--cCccccccCCcEEEECCCee
Confidence            999  89999999999999999974

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=277.82  Aligned_cols=219  Identities=23%  Similarity=0.255  Sum_probs=179.5

Q ss_pred             ecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQDNL---GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||  ++|||++++++|+++|++|++++|++..   .+++..+.  .....++||++|+++++++++++.++
T Consensus         4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAEL--DSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhcc--CCceEEECCCCCHHHHHHHHHHHHHH
Confidence            68899999997  6799999999999999999998776432   22222222  23567899999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCc-c-CCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRGF-V-SILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~-~-~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +|++|++|||||....... . .+++.+.++|++++++|+.+++++++.++|.|+++ +|+|+++||.++    ..+.++
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~-~g~Iv~iss~~~----~~~~~~  156 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR-NSAIVALSYLGA----VRAIPN  156 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc-CcEEEEEccccc----ccCCCC
Confidence            9999999999876532110 1 13457888999999999999999999999999654 588999995543    222233


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|++++++.++.|++++|||||+|+| |.++|+                      ++  |+|++.++.|
T Consensus       157 ~---~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~  232 (261)
T PRK08690        157 Y---NVMGMAKASLEAGIRFTAACLGKEGIRCNGISA-GPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAF  232 (261)
T ss_pred             c---ccchhHHHHHHHHHHHHHHHhhhcCeEEEEEec-CcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 766664                      11  9999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  +++.+.++||+++.+|||+.
T Consensus       233 l--~s~~~~~~tG~~i~vdgG~~  253 (261)
T PRK08690        233 L--LSDLSSGITGEITYVDGGYS  253 (261)
T ss_pred             H--hCcccCCcceeEEEEcCCcc
Confidence            9  99999999999999999974

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=1.4e-40  Score=277.64  Aligned_cols=221  Identities=27%  Similarity=0.309  Sum_probs=181.6

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc--hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN--LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ++++|+++||||+  +|||++++++|+++|++|+++.|+.+  ..++..+++.  ..++.++++|++|+++++++++++.
T Consensus         3 ~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   82 (258)
T PRK07370          3 DLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIK   82 (258)
T ss_pred             ccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHH
Confidence            4789999999986  89999999999999999998865432  2222222221  1346788999999999999999999


Q ss_pred             HHcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +.+|++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|.|++  +|+|+++||..+    ..+.+
T Consensus        83 ~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~--~g~Iv~isS~~~----~~~~~  156 (258)
T PRK07370         83 QKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE--GGSIVTLTYLGG----VRAIP  156 (258)
T ss_pred             HHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh--CCeEEEEecccc----ccCCc
Confidence            9999999999998754311 1245678899999999999999999999999999963  489999995432    22222


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~  231 (255)
                      ..   ..|++||+|+++|++.|+.|++++|||||+|+| |.++|+                      ++  |+|+++++.
T Consensus       157 ~~---~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~  232 (258)
T PRK07370        157 NY---NVMGVAKAALEASVRYLAAELGPKNIRVNAISA-GPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAA  232 (258)
T ss_pred             cc---chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEec-CcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHH
Confidence            22   679999999999999999999999999999999 766553                      11  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +++.+.++||+++.+|||++
T Consensus       233 fl--~s~~~~~~tG~~i~vdgg~~  254 (258)
T PRK07370        233 FL--LSDLASGITGQTIYVDAGYC  254 (258)
T ss_pred             HH--hChhhccccCcEEEECCccc
Confidence            99  89999999999999999975

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.8e-40  Score=275.94  Aligned_cols=219  Identities=27%  Similarity=0.319  Sum_probs=182.1

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .|++|+++||||+  +|||++++++|+++|++|++++|++.   ..+++.++++  ...++++|++|+++++++++++.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELG--AFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcC--CceEEecCCCCHHHHHHHHHHHHH
Confidence            4688999999997  89999999999999999999888642   3333444432  356789999999999999999999


Q ss_pred             HcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|++|++|||||..... ...++.+.+.++|++++++|+.+++++++.++|.|++  +|+|+++||.++    ..+.+.
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~iss~~~----~~~~p~  158 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD--GGSILTLTYYGA----EKVMPH  158 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC--CceEEEEecccc----ccCCCc
Confidence            999999999998765321 1245677899999999999999999999999999953  589999995432    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                      ++  |||+++.++|
T Consensus       159 ~---~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~  234 (272)
T PRK08159        159 Y---NVMGVAKAALEASVKYLAVDLGPKNIRVNAISA-GPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALY  234 (272)
T ss_pred             c---hhhhhHHHHHHHHHHHHHHHhcccCeEEEEeec-CCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHH
Confidence            3   569999999999999999999999999999999 766543                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       235 L--~s~~~~~itG~~i~vdgG~~  255 (272)
T PRK08159        235 L--LSDLSRGVTGEVHHVDSGYH  255 (272)
T ss_pred             H--hCccccCccceEEEECCCce
Confidence            9  89999999999999999974

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-40  Score=272.51  Aligned_cols=225  Identities=27%  Similarity=0.371  Sum_probs=190.0

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ..+++++|+++|||+++|||++++++|+++|++|++++|+.+ ..++..+++.  ..++.++.+|++|+++++++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345689999999999999999999999999999999998764 3455544443  2367889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.++++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++|+++||..+..    +.+.
T Consensus        82 ~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~~~  154 (254)
T PRK06114         82 AELGALTLAVNAAGIAN---ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGII----VNRG  154 (254)
T ss_pred             HHcCCCCEEEECCCCCC---CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcC----CCCC
Confidence            99999999999987654   2456778999999999999999999999999999888789999999654321    1111


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l  233 (255)
                       .+...|++||+|++++++.++.|+.++|||||+|+| +.++|+                  +   +  |+|++..++||
T Consensus       155 -~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~P-G~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l  232 (254)
T PRK06114        155 -LLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISP-GYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFL  232 (254)
T ss_pred             -CCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee-cCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence             112569999999999999999999999999999999 776664                  1   1  78999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||+++.+|||+.
T Consensus       233 --~s~~~~~~tG~~i~~dgg~~  252 (254)
T PRK06114        233 --LSDAASFCTGVDLLVDGGFV  252 (254)
T ss_pred             --cCccccCcCCceEEECcCEe
Confidence              89999999999999999973

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=8.5e-40  Score=273.27  Aligned_cols=218  Identities=22%  Similarity=0.232  Sum_probs=178.1

Q ss_pred             ecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecC---cchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQ---DNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||  ++|||++++++|+++|++|++++|.   .+..+++.++.+  ...++++|++|+++++++++++.++
T Consensus         4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (260)
T PRK06997          4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG--SDLVFPCDVASDEQIDALFASLGQH   81 (260)
T ss_pred             cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcC--CcceeeccCCCHHHHHHHHHHHHHH
Confidence            67899999996  6799999999999999999998654   333444444433  3356899999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccC-CCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVS-ILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~-~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +|++|++|||||...... ..+ +.+.+.++|++++++|+.++++++++++|+|+  ++|+|+++||.++    ..+.+.
T Consensus        82 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~--~~g~Ii~iss~~~----~~~~~~  155 (260)
T PRK06997         82 WDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS--DDASLLTLSYLGA----ERVVPN  155 (260)
T ss_pred             hCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC--CCceEEEEecccc----ccCCCC
Confidence            999999999987643210 012 34578899999999999999999999999994  3588999995543    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++++++|+.|++++|||||+|+| |.++|+                      ++  |+|+++++.|
T Consensus       156 ~---~~Y~asKaal~~l~~~la~el~~~gIrVn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~  231 (260)
T PRK06997        156 Y---NTMGLAKASLEASVRYLAVSLGPKGIRANGISA-GPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAF  231 (260)
T ss_pred             c---chHHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHH
Confidence            2   569999999999999999999999999999999 666542                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||+.
T Consensus       232 l--~s~~~~~itG~~i~vdgg~~  252 (260)
T PRK06997        232 L--LSDLASGVTGEITHVDSGFN  252 (260)
T ss_pred             H--hCccccCcceeEEEEcCChh
Confidence            9  89999999999999999973

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-39  Score=271.56  Aligned_cols=219  Identities=24%  Similarity=0.271  Sum_probs=183.8

Q ss_pred             eecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++|||+  ++|||++++++|+++|++|++++|+.  +..+++.++++ .++.++++|++|+++++++++++.+.
T Consensus         4 ~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~~~~~~~~   82 (256)
T PRK07889          4 LLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLP-EPAPVLELDVTNEEHLASLADRVREH   82 (256)
T ss_pred             cccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHHHHHHHHH
Confidence            478899999999  89999999999999999999998764  34455555554 36778999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCc-cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++|||||....... .++.+.+.++|++++++|+.+++++++.++|.|++  +|+|+++|+.+     ....+.+
T Consensus        83 ~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~--~g~Iv~is~~~-----~~~~~~~  155 (256)
T PRK07889         83 VDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE--GGSIVGLDFDA-----TVAWPAY  155 (256)
T ss_pred             cCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc--CceEEEEeecc-----cccCCcc
Confidence            9999999999886532111 34667789999999999999999999999999963  48899987432     1112222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALY  232 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~  232 (255)
                         ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                       ++  |+|++..+++
T Consensus       156 ---~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~  231 (256)
T PRK07889        156 ---DWMGVAKAALESTNRYLARDLGPRGIRVNLVAA-GPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVA  231 (256)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhhhcCeEEEeecc-CcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHH
Confidence               568999999999999999999999999999999 777664                       12  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||+++.+|||++
T Consensus       232 l--~s~~~~~~tG~~i~vdgg~~  252 (256)
T PRK07889        232 L--LSDWFPATTGEIVHVDGGAH  252 (256)
T ss_pred             H--hCcccccccceEEEEcCcee
Confidence            9  89999999999999999974

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=8.1e-40  Score=277.34  Aligned_cols=221  Identities=22%  Similarity=0.236  Sum_probs=180.8

Q ss_pred             eeecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-----------C----ceEEEEeeC--
Q 025252           22 YRLQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-----------Q----DVCYIHCDV--   82 (255)
Q Consensus        22 ~~~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------~----~~~~~~~D~--   82 (255)
                      ++++||+++|||+  ++|||+++|++|+++|++|++ +|+.+.++++......           +    ....+.+|+  
T Consensus         5 ~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   83 (303)
T PLN02730          5 IDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVF   83 (303)
T ss_pred             cCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceec
Confidence            5689999999999  899999999999999999999 7776666555533321           1    145678898  


Q ss_pred             CC------------------HHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252           83 SN------------------EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus        83 ~~------------------~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                      ++                  +++++++++++.+.+|++|+||||||.... ...++.+.+.++|++++++|+.++++++|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~-~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         84 DTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPE-VTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             CccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc-CCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            33                  448999999999999999999999864321 12567889999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh---
Q 025252          145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA---  220 (255)
Q Consensus       145 ~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~---  220 (255)
                      .++|.|++  .|+||++||..+    ..+.+..  ...|++||+|+++|+++|+.|+++ +|||||+|+| |.++|+   
T Consensus       163 ~~~p~m~~--~G~II~isS~a~----~~~~p~~--~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~P-G~v~T~~~~  233 (303)
T PLN02730        163 HFGPIMNP--GGASISLTYIAS----ERIIPGY--GGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISA-GPLGSRAAK  233 (303)
T ss_pred             HHHHHHhc--CCEEEEEechhh----cCCCCCC--chhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEee-CCccCchhh
Confidence            99999965  399999995432    2222211  135999999999999999999986 8999999999 776654   


Q ss_pred             ----------------H---h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ----------------E---A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ----------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                      +   +  |+|++..+.||  +++.+.++||+++.+|||++
T Consensus       234 ~~~~~~~~~~~~~~~~pl~r~~~peevA~~~~fL--aS~~a~~itG~~l~vdGG~~  287 (303)
T PLN02730        234 AIGFIDDMIEYSYANAPLQKELTADEVGNAAAFL--ASPLASAITGATIYVDNGLN  287 (303)
T ss_pred             cccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCccccCccCCEEEECCCcc
Confidence                            1   1  88999999999  99999999999999999974

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=271.05  Aligned_cols=222  Identities=35%  Similarity=0.476  Sum_probs=191.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++..  .++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   82 (254)
T PRK07478          3 RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG   82 (254)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            46789999999999999999999999999999999998877777666532  4688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.++|+++||..+..   .+.+.   .
T Consensus        83 ~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~---~~~~~---~  154 (254)
T PRK07478         83 GLDIAFNNAGTLGE--MGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHT---AGFPG---M  154 (254)
T ss_pred             CCCEEEECCCCCCC--CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhc---cCCCC---c
Confidence            99999999876432  2456678899999999999999999999999999888889999999543221   11222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||++++.++++++.|++++||+||+|+| |.++|+                      ++  |+|+++.++|+  +
T Consensus       155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~  231 (254)
T PRK07478        155 AAYAASKAGLIGLTQVLAAEYGAQGIRVNALLP-GGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFL--A  231 (254)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCEEEEEEee-CcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--c
Confidence            679999999999999999999999999999999 777765                      01  88999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||+++.+|||+.
T Consensus       232 s~~~~~~~G~~~~~dgg~~  250 (254)
T PRK07478        232 SDAASFVTGTALLVDGGVS  250 (254)
T ss_pred             CchhcCCCCCeEEeCCchh
Confidence            8999999999999999973

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-39  Score=272.28  Aligned_cols=221  Identities=25%  Similarity=0.336  Sum_probs=190.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++.    ..++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   83 (265)
T PRK07062          4 IQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEA   83 (265)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999877766655543    23678899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++|||||...   ..++.+.+.++|++.+++|+.+++++++.++|.|++++.|+|+++||..+    ..+.+..
T Consensus        84 ~~g~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~  156 (265)
T PRK07062         84 RFGGVDMLVNNAGQGR---VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLA----LQPEPHM  156 (265)
T ss_pred             hcCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccc----cCCCCCc
Confidence            9999999999987643   24567788999999999999999999999999998877899999995543    2222323


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--H
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--I  223 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~  223 (255)
                         ..|+++|++++++++.++.|++++||+||+|+| +.++|+                                ++  |
T Consensus       157 ---~~y~asKaal~~~~~~la~e~~~~gi~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  232 (265)
T PRK07062        157 ---VATSAARAGLLNLVKSLATELAPKGVRVNSILL-GLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRP  232 (265)
T ss_pred             ---hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCH
Confidence               569999999999999999999999999999999 766553                                11  7


Q ss_pred             HhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          224 ASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       224 ~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|++.++.||  +++.+.++||+++.+|||++
T Consensus       233 ~~va~~~~~L--~s~~~~~~tG~~i~vdgg~~  262 (265)
T PRK07062        233 DEAARALFFL--ASPLSSYTTGSHIDVSGGFA  262 (265)
T ss_pred             HHHHHHHHHH--hCchhcccccceEEEcCceE
Confidence            8999999999  88889999999999999974

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-39  Score=270.84  Aligned_cols=219  Identities=20%  Similarity=0.248  Sum_probs=178.7

Q ss_pred             ecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||++  |||++++++|+++|++|++++|+. ..++..+++..  ....++.+|++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6789999999986  999999999999999999998874 22222333221  346788999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCc--cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252          100 GKLDILVNSGCNLEYRGF--VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      |++|++|||||.......  ..+.+.+.++|++++++|+.+++.+++.+.|.++  ++|+|+++||.++    ..+.+..
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~g~Iv~iss~~~----~~~~~~~  156 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLGA----ERAIPNY  156 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc--CCcEEEEEecCCC----CCCCCCc
Confidence            999999999876432110  1145678899999999999999999999999764  3488999996543    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l  233 (255)
                         ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                      ++  |+|++.++.||
T Consensus       157 ---~~Y~asKaal~~l~~~la~el~~~gIrVn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L  232 (262)
T PRK07984        157 ---NVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL  232 (262)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhcccCcEEeeeec-CcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHH
Confidence               569999999999999999999999999999999 776553                      11  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.+++|+++.+|||+.
T Consensus       233 --~s~~~~~itG~~i~vdgg~~  252 (262)
T PRK07984        233 --CSDLSAGISGEVVHVDGGFS  252 (262)
T ss_pred             --cCcccccccCcEEEECCCcc
Confidence              89999999999999999963

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-39  Score=270.47  Aligned_cols=224  Identities=21%  Similarity=0.287  Sum_probs=187.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+|++|+++||||++|||++++++|+++|++|++++| +++..+++.+++.   ..++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   83 (260)
T PRK08416          4 NEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDE   83 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998865 4444444444432   24688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccc---cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           98 KFGKLDILVNSGCNLEY---RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      .++++|++||||+..+.   ....++.+.+.+++++++++|+.+++.+++.++|.|++++.|+||++||...    ..+.
T Consensus        84 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~  159 (260)
T PRK08416         84 DFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGN----LVYI  159 (260)
T ss_pred             hcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecccc----ccCC
Confidence            99999999999875431   1224566778899999999999999999999999998777789999996432    2222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~  230 (255)
                      +..   ..|++||+|++++++.++.|++++|||||+|+| |.++|+                      ++  |+|++.++
T Consensus       160 ~~~---~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~  235 (260)
T PRK08416        160 ENY---AGHGTSKAAVETMVKYAATELGEKNIRVNAVSG-GPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGAC  235 (260)
T ss_pred             CCc---ccchhhHHHHHHHHHHHHHHhhhhCeEEEEEee-CcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            223   569999999999999999999999999999999 777665                      12  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|+  +++...+++|+++.+|||++
T Consensus       236 ~~l--~~~~~~~~~G~~i~vdgg~~  258 (260)
T PRK08416        236 LFL--CSEKASWLTGQTIVVDGGTT  258 (260)
T ss_pred             HHH--cChhhhcccCcEEEEcCCee
Confidence            999  88889999999999999974

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.6e-39  Score=270.55  Aligned_cols=217  Identities=26%  Similarity=0.447  Sum_probs=185.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+ +...+..+++.  ..++.++.+|++++++++++++++.+.+|+
T Consensus         4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (272)
T PRK08589          4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR   82 (272)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            679999999999999999999999999999999999 65556555553  246889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||....  ..++.+.+.+.|++++++|+.+++++++.++|+|++++ |+|+++||...    ..+.+..   .
T Consensus        83 id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~----~~~~~~~---~  152 (272)
T PRK08589         83 VDVLFNNAGVDNA--AGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSG----QAADLYR---S  152 (272)
T ss_pred             cCEEEECCCCCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhh----cCCCCCC---c
Confidence            9999999876532  13556778999999999999999999999999997654 89999995432    2222222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------Hh--HHhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------EA--IASIANAAL  231 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~~--~~~~~~~~~  231 (255)
                      .|++||+|++++++.++.|+.++||+||+|+| |.++|+                            ++  |+|+++.+.
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  231 (272)
T PRK08589        153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAP-GTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVV  231 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHH
Confidence            79999999999999999999999999999999 766553                            01  889999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +++...+++|+++.+|||+
T Consensus       232 ~l--~s~~~~~~~G~~i~vdgg~  252 (272)
T PRK08589        232 FL--ASDDSSFITGETIRIDGGV  252 (272)
T ss_pred             HH--cCchhcCcCCCEEEECCCc
Confidence            99  8888999999999999996

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6e-39  Score=268.26  Aligned_cols=217  Identities=32%  Similarity=0.466  Sum_probs=186.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++. .++.++++|+++.++++++++++.+.++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   81 (261)
T PRK08265          3 GLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLG-ERARFIATDITDDAAIERAVATVVARFGRV   81 (261)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeeEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999999877777766654 468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+.....   . .+.+.++|++.+++|+.+++++++.++|.|+ ++.|+|+++||..+    ..+.+..   ..
T Consensus        82 d~lv~~ag~~~~~---~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~g~ii~isS~~~----~~~~~~~---~~  149 (261)
T PRK08265         82 DILVNLACTYLDD---G-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RGGGAIVNFTSISA----KFAQTGR---WL  149 (261)
T ss_pred             CEEEECCCCCCCC---c-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cCCcEEEEECchhh----ccCCCCC---ch
Confidence            9999998764322   2 2568899999999999999999999999997 66789999995432    2222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhhcc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~~~  236 (255)
                      |+++|++++++++.++.|+.++|||||+|+| +.++|+                        ++  |+|++.++.|+  +
T Consensus       150 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l--~  226 (261)
T PRK08265        150 YPASKAAIRQLTRSMAMDLAPDGIRVNSVSP-GWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFL--C  226 (261)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCEEEEEEcc-CCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHH--c
Confidence            9999999999999999999999999999999 655543                        11  69999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...++||+++.+|||++
T Consensus       227 s~~~~~~tG~~i~vdgg~~  245 (261)
T PRK08265        227 SDAASFVTGADYAVDGGYS  245 (261)
T ss_pred             CccccCccCcEEEECCCee
Confidence            8889999999999999974

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=6e-39  Score=270.53  Aligned_cols=227  Identities=24%  Similarity=0.364  Sum_probs=192.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ++.+++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++..  .++.++++|++++++++++++++.
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            344568999999999999999999999999999999999998777666665532  368889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccC------------ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccC
Q 025252           97 AKFGKLDILVNSGCNLEYRG------------FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT  164 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~  164 (255)
                      +.++++|++||||+......            ..++.+.+.++|++++++|+.+++++++.++|.|.+++.++||++||.
T Consensus        83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~  162 (278)
T PRK08277         83 EDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSM  162 (278)
T ss_pred             HHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccc
Confidence            99999999999987543211            134667889999999999999999999999999987778999999955


Q ss_pred             CCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------
Q 025252          165 GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------  220 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------  220 (255)
                      .+    ..+.++.   ..|++||+|++.+++.++.|++++|||||+|+| +.++|+                        
T Consensus       163 ~~----~~~~~~~---~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  234 (278)
T PRK08277        163 NA----FTPLTKV---PAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAP-GFFLTEQNRALLFNEDGSLTERANKILAHT  234 (278)
T ss_pred             hh----cCCCCCC---chhHHHHHHHHHHHHHHHHHhCccCeEEEEEEe-ccCcCcchhhhhccccccchhHHHHHhccC
Confidence            43    2222222   669999999999999999999999999999999 655543                        


Q ss_pred             ---Hh--HHhhhhhhhhhhccCC-CCCeeeceeEEecCCcC
Q 025252          221 ---EA--IASIANAALYNMAKDD-DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ---~~--~~~~~~~~~~l~~~~~-~~~~~~G~~i~~dgG~~  255 (255)
                         ++  |+|++.++.||  +++ .+.++||++|.+|||++
T Consensus       235 p~~r~~~~~dva~~~~~l--~s~~~~~~~tG~~i~vdgG~~  273 (278)
T PRK08277        235 PMGRFGKPEELLGTLLWL--ADEKASSFVTGVVLPVDGGFS  273 (278)
T ss_pred             CccCCCCHHHHHHHHHHH--cCccccCCcCCCEEEECCCee
Confidence               11  89999999999  898 89999999999999974

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.6e-39  Score=263.99  Aligned_cols=201  Identities=26%  Similarity=0.343  Sum_probs=181.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .+++++++|||||+|||+++|++|+++|++|++++|+++++.++.+++..   ..+.++.+|++++++++++.+++.+..
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            36789999999999999999999999999999999999999999988875   257889999999999999999999988


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +.||+||||||...   ++++.+.++++.++++++|+.+...++++++|.|.+++.|.|||++    |..+..+.+..  
T Consensus        83 ~~IdvLVNNAG~g~---~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~----S~ag~~p~p~~--  153 (265)
T COG0300          83 GPIDVLVNNAGFGT---FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIG----SAAGLIPTPYM--  153 (265)
T ss_pred             CcccEEEECCCcCC---ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEe----chhhcCCCcch--
Confidence            89999999998765   4678999999999999999999999999999999999999999999    55556666666  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------H-h--HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------E-A--IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~-~--~~~~~~~~~~l~  234 (255)
                       +.|++||+++.+|+++|+.|++++||+|.+++| |.+.|+               . +  |+++++.....+
T Consensus       154 -avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~P-G~~~T~f~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l  224 (265)
T COG0300         154 -AVYSATKAFVLSFSEALREELKGTGVKVTAVCP-GPTRTEFFDAKGSDVYLLSPGELVLSPEDVAEAALKAL  224 (265)
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEec-CccccccccccccccccccchhhccCHHHHHHHHHHHH
Confidence             789999999999999999999999999999999 988886               1 1  888888887763

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-39  Score=271.61  Aligned_cols=217  Identities=29%  Similarity=0.417  Sum_probs=184.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---------chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---------NLGQALADKLG--HQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      +++|+++||||++|||++++++|+++|++|++++++.         +..++..+++.  ..++.++.+|++|++++++++
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            6789999999999999999999999999999998875         55555555553  246788999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC------CCcEEEeccCCC
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR------RGCILYTTGTGT  166 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~is~~~~  166 (255)
                      +++.+.+|++|++|||||....   .++.+.+.++|++++++|+.++++++++++|+|+++.      .|+||++||..+
T Consensus        84 ~~~~~~~g~id~lv~nAG~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGILRD---RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHhcCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            9999999999999999886542   4567889999999999999999999999999996532      379999995432


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh--HHhh
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA--IASI  226 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~--~~~~  226 (255)
                          ..+.++.   ..|++||+|++++++.++.|++++|||||+|+| + ++|+                  ++  |+|+
T Consensus       161 ----~~~~~~~---~~Y~asKaal~~l~~~la~el~~~gIrVn~v~P-g-~~T~~~~~~~~~~~~~~~~~~~~~~~pedv  231 (286)
T PRK07791        161 ----LQGSVGQ---GNYSAAKAGIAALTLVAAAELGRYGVTVNAIAP-A-ARTRMTETVFAEMMAKPEEGEFDAMAPENV  231 (286)
T ss_pred             ----CcCCCCc---hhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECC-C-CCCCcchhhHHHHHhcCcccccCCCCHHHH
Confidence                2333333   679999999999999999999999999999999 4 3332                  11  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +.+++||  +++.+.++||+++.+|||+
T Consensus       232 a~~~~~L--~s~~~~~itG~~i~vdgG~  257 (286)
T PRK07791        232 SPLVVWL--GSAESRDVTGKVFEVEGGK  257 (286)
T ss_pred             HHHHHHH--hCchhcCCCCcEEEEcCCc
Confidence            9999999  8999999999999999996

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.3e-39  Score=269.12  Aligned_cols=208  Identities=33%  Similarity=0.486  Sum_probs=177.4

Q ss_pred             cCC--ChHHHHHHHHHHHcCCEEEEEecCcchH----HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCccEE
Q 025252           33 GGA--SGIGASAAQLFHKNGAKVVIADVQDNLG----QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDIL  105 (255)
Q Consensus        33 Gas--~giG~aia~~l~~~g~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l  105 (255)
                      |++  +|||+++|++|+++|++|++++|+.+..    +++.++.+   ..++.+|++++++++++++++.+.+ |++|++
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~---~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~l   77 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG---AEVIQCDLSDEESVEALFDEAVERFGGRIDIL   77 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT---SEEEESCTTSHHHHHHHHHHHHHHHCSSESEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC---CceEeecCcchHHHHHHHHHHHhhcCCCeEEE
Confidence            566  9999999999999999999999998873    44444443   3359999999999999999999999 999999


Q ss_pred             EEcCCCccc-cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          106 VNSGCNLEY-RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       106 i~~a~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      |||++.... ....++.+.+.++|++.+++|+.+++.+++.+.|+|++  .|+||++||.    ....+.++.   ..|+
T Consensus        78 V~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gsii~iss~----~~~~~~~~~---~~y~  148 (241)
T PF13561_consen   78 VNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK--GGSIINISSI----AAQRPMPGY---SAYS  148 (241)
T ss_dssp             EEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--EEEEEEEEEG----GGTSBSTTT---HHHH
T ss_pred             EecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCCcccccch----hhcccCccc---hhhH
Confidence            999765543 12356677899999999999999999999999998854  4889999944    333333333   5799


Q ss_pred             cchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          185 VSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      ++|+|++++++.||.||++ +|||||+|+| |.++|+                      ++  |+|++.++.||  +|+.
T Consensus       149 ~sKaal~~l~r~lA~el~~~~gIrVN~V~p-G~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL--~s~~  225 (241)
T PF13561_consen  149 ASKAALEGLTRSLAKELAPKKGIRVNAVSP-GPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFL--ASDA  225 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHGGHGTEEEEEEEE-SSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHH--HSGG
T ss_pred             HHHHHHHHHHHHHHHHhccccCeeeeeecc-cceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHH--hCcc
Confidence            9999999999999999999 9999999999 888765                      22  99999999999  9999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.|+|||+|.||||++
T Consensus       226 a~~itG~~i~vDGG~s  241 (241)
T PF13561_consen  226 ASYITGQVIPVDGGFS  241 (241)
T ss_dssp             GTTGTSEEEEESTTGG
T ss_pred             ccCccCCeEEECCCcC
Confidence            9999999999999985

...

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.2e-39  Score=265.93  Aligned_cols=221  Identities=24%  Similarity=0.360  Sum_probs=191.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.+|+++||||++|||++++++|+++|++|++++|+++...+..+++..  .++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   84 (254)
T PRK08085          5 FSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI   84 (254)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999999998877777666542  357788999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||++...   ..++.+.+.++|++++++|+.+++.+++.+.+.+.+++.++|+++||..    ...+.+..  
T Consensus        85 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~----~~~~~~~~--  155 (254)
T PRK08085         85 GPIDVLINNAGIQR---RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQ----SELGRDTI--  155 (254)
T ss_pred             CCCCEEEECCCcCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccch----hccCCCCC--
Confidence            99999999987543   2456678899999999999999999999999999777779999999543    22222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~  235 (255)
                       ..|+++|++++++++.++.|++++|||||+|+| +.++|+                   +   +  |+|++.++.++  
T Consensus       156 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~p-G~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l--  231 (254)
T PRK08085        156 -TPYAASKGAVKMLTRGMCVELARHNIQVNGIAP-GYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFL--  231 (254)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEe-CCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             669999999999999999999999999999999 777664                   1   1  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||+.+.+|||++
T Consensus       232 ~~~~~~~i~G~~i~~dgg~~  251 (254)
T PRK08085        232 SSKASDFVNGHLLFVDGGML  251 (254)
T ss_pred             hCccccCCcCCEEEECCCee
Confidence            99999999999999999974

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=265.84  Aligned_cols=218  Identities=17%  Similarity=0.257  Sum_probs=184.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++++||||++|||++++++|+++|++|++++|+++..++..+++.. .++.++++|++|+++++++++++.+.++++|++
T Consensus         1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            3699999999999999999999999999999998877777666542 467889999999999999999999999999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc-CCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      |||||..... ..++.+.+.++|.+.+++|+.+++++++.++|.|. ++++|+||++||...    ..+.+..   ..|+
T Consensus        81 i~naG~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~----~~~~~~~---~~y~  152 (259)
T PRK08340         81 VWNAGNVRCE-PCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSV----KEPMPPL---VLAD  152 (259)
T ss_pred             EECCCCCCCC-ccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCccc----CCCCCCc---hHHH
Confidence            9998764311 23466778899999999999999999999999876 456789999995543    2222222   5699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHhhhhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IASIANAA  230 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~~~~~~  230 (255)
                      +||+++++++++++.|++++|||||+|+| |.++|+                                ++  |+|+++++
T Consensus       153 ~sKaa~~~~~~~la~e~~~~gI~v~~v~p-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~  231 (259)
T PRK08340        153 VTRAGLVQLAKGVSRTYGGKGIRAYTVLL-GSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLI  231 (259)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEEecc-CcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHH
Confidence            99999999999999999999999999999 655442                                11  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .||  +++++.++||+++.+|||++
T Consensus       232 ~fL--~s~~~~~itG~~i~vdgg~~  254 (259)
T PRK08340        232 AFL--LSENAEYMLGSTIVFDGAMT  254 (259)
T ss_pred             HHH--cCcccccccCceEeecCCcC
Confidence            999  99999999999999999974

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-38  Score=263.88  Aligned_cols=221  Identities=26%  Similarity=0.437  Sum_probs=187.7

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+ ...+++.+.+.  ..++.++++|+++.++++++++++.+.
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   88 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEE   88 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999988 43444443332  246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|++|||++...   ..++.+.+.++|++.+++|+.+++.+++.++|+|++++.++|+++||...    ..+.+.. 
T Consensus        89 ~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~-  160 (258)
T PRK06935         89 FGKIDILVNNAGTIR---RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLS----FQGGKFV-  160 (258)
T ss_pred             cCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHh----ccCCCCc-
Confidence            999999999987543   24566778999999999999999999999999998887899999995432    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        ..|++||++++++++.+++|+.++|||||+|+| +.++|+                      ++  |+|++.++.|| 
T Consensus       161 --~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  236 (258)
T PRK06935        161 --PAYTASKHGVAGLTKAFANELAAYNIQVNAIAP-GYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFL-  236 (258)
T ss_pred             --hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe-ccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence              569999999999999999999999999999999 777654                      01  78999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.+++|+++.+|||++
T Consensus       237 -~s~~~~~~~G~~i~~dgg~~  256 (258)
T PRK06935        237 -ASRASDYVNGHILAVDGGWL  256 (258)
T ss_pred             -cChhhcCCCCCEEEECCCee
Confidence             89999999999999999974

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=4.1e-38  Score=262.04  Aligned_cols=220  Identities=20%  Similarity=0.370  Sum_probs=183.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++++|+++|||+++|||++++++|+++|++|++++++... ..+...+. ..++..+++|++|.++++++++++.+.++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTAL-GRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            46889999999999999999999999999999988775431 11111222 24678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++ .|+|+++||..+.    .+.+..  
T Consensus        85 ~~D~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~----~~~~~~--  155 (253)
T PRK08993         85 HIDILVNNAGLIR---REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF----QGGIRV--  155 (253)
T ss_pred             CCCEEEECCCCCC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc----cCCCCC--
Confidence            9999999987643   24566788999999999999999999999999987654 5899999965432    222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||+|++++++.++.|+.++||+||+|+| |.++|+                      ++  |+|++..+.++  
T Consensus       156 -~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~p-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l--  231 (253)
T PRK08993        156 -PSYTASKSGVMGVTRLMANEWAKHNINVNAIAP-GYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFL--  231 (253)
T ss_pred             -cchHHHHHHHHHHHHHHHHHhhhhCeEEEEEee-CcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             469999999999999999999999999999999 777663                      12  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.+++|+++.+|||++
T Consensus       232 ~s~~~~~~~G~~~~~dgg~~  251 (253)
T PRK08993        232 ASSASDYINGYTIAVDGGWL  251 (253)
T ss_pred             hCccccCccCcEEEECCCEe
Confidence            89999999999999999974

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.4e-38  Score=264.51  Aligned_cols=223  Identities=46%  Similarity=0.768  Sum_probs=189.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.. .++.++++|++|+++++++++++.+.+|
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g   93 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG   93 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            357899999999999999999999999999999999987776666666543 3688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||..... ...+.+.+.+++++++++|+.++++++++++|.|.+++.|+|+++||..+    ..+.+..   
T Consensus        94 ~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~----~~~~~~~---  165 (280)
T PLN02253         94 TLDIMVNNAGLTGPP-CPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVAS----AIGGLGP---  165 (280)
T ss_pred             CCCEEEECCCcCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhh----cccCCCC---
Confidence            999999998765321 13466788999999999999999999999999998777789999995432    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------H-h-HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------E-A-IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~-~-~~~~~  227 (255)
                      ..|++||++++++++.++.|++++||+||+++| |.++|+                               . . |+|++
T Consensus       166 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva  244 (280)
T PLN02253        166 HAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSP-YAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVA  244 (280)
T ss_pred             cccHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHH
Confidence            569999999999999999999999999999999 655432                               0 1 89999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.++  +++.+.+++|+++.+|||+.
T Consensus       245 ~~~~~l--~s~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        245 NAVLFL--ASDEARYISGLNLMIDGGFT  270 (280)
T ss_pred             HHHHhh--cCcccccccCcEEEECCchh
Confidence            999999  88999999999999999973

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=4.3e-38  Score=262.70  Aligned_cols=210  Identities=28%  Similarity=0.455  Sum_probs=182.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|++...         .++.++++|++|+++++++++++.+.++++
T Consensus         3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~---------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~i   73 (258)
T PRK06398          3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY---------NDVDYFKVDVSNKEQVIKGIDYVISKYGRI   73 (258)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc---------CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            47899999999999999999999999999999999986532         257889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.+++.+++.++|+|++++.++||++||...    ..+.++.   ..
T Consensus        74 d~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---~~  143 (258)
T PRK06398         74 DILVNNAGIES---YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS----FAVTRNA---AA  143 (258)
T ss_pred             CEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchh----ccCCCCC---ch
Confidence            99999987643   35677889999999999999999999999999998777899999996533    2222222   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |++||++++++++.++.|+.+. |+||+|+| +.++|+                               ++  |+|++.+
T Consensus       144 Y~~sKaal~~~~~~la~e~~~~-i~vn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~  221 (258)
T PRK06398        144 YVTSKHAVLGLTRSIAVDYAPT-IRCVAVCP-GSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYV  221 (258)
T ss_pred             hhhhHHHHHHHHHHHHHHhCCC-CEEEEEec-CCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHH
Confidence            9999999999999999999886 99999999 665443                               11  8899999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +++...+++|+++.+|||.+
T Consensus       222 ~~~l--~s~~~~~~~G~~i~~dgg~~  245 (258)
T PRK06398        222 VAFL--ASDLASFITGECVTVDGGLR  245 (258)
T ss_pred             HHHH--cCcccCCCCCcEEEECCccc
Confidence            9999  88889999999999999974

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-38  Score=263.06  Aligned_cols=218  Identities=29%  Similarity=0.420  Sum_probs=183.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++|+++||||++|||++++++|+++|++|++++|+++..+++.++.. .++.++++|++++++++++++++.+.++++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   81 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFG-DHVLVVEGDVTSYADNQRAVDQTVDAFGKL   81 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            3678999999999999999999999999999999999888777776654 467889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHH----HHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSD----LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |++|||||.....  .++.+.+.++    |++++++|+.+++.+++.++|.|+++ +|+||++||..+    ..+..+. 
T Consensus        82 d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~----~~~~~~~-  153 (263)
T PRK06200         82 DCFVGNAGIWDYN--TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS-GGSMIFTLSNSS----FYPGGGG-  153 (263)
T ss_pred             CEEEECCCCcccC--CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc-CCEEEEECChhh----cCCCCCC-
Confidence            9999998764321  2344445554    89999999999999999999998654 588999995432    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IAS  225 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~  225 (255)
                        ..|++||++++++++.++.|+++. ||||+|+| |.++|+                               ++  |+|
T Consensus       154 --~~Y~~sK~a~~~~~~~la~el~~~-Irvn~i~P-G~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~e  229 (263)
T PRK06200        154 --PLYTASKHAVVGLVRQLAYELAPK-IRVNGVAP-GGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPED  229 (263)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHhcC-cEEEEEeC-CccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHH
Confidence              569999999999999999999885 99999999 665542                               11  899


Q ss_pred             hhhhhhhhhccCCC-CCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDD-TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~-~~~~~G~~i~~dgG~~  255 (255)
                      ++.++.||  +++. +.++||+++.+|||++
T Consensus       230 va~~~~fl--~s~~~~~~itG~~i~vdgG~~  258 (263)
T PRK06200        230 HTGPYVLL--ASRRNSRALTGVVINADGGLG  258 (263)
T ss_pred             Hhhhhhhe--ecccccCcccceEEEEcCcee
Confidence            99999999  8888 9999999999999974

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-37  Score=259.14  Aligned_cols=222  Identities=27%  Similarity=0.457  Sum_probs=190.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++..  .++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999988777766665532  357789999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||||+....  ..++.+.+.+++++.+++|+.++++++++++|++++++.++|+++||..+    ..+.++   
T Consensus        84 ~~id~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~---  154 (252)
T PRK07035         84 GRLDILVNNAAANPY--FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNG----VSPGDF---  154 (252)
T ss_pred             CCCCEEEECCCcCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhh----cCCCCC---
Confidence            999999999764321  24566788999999999999999999999999998777899999995432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                      ...|++||+++++++++++.|+.++||+|++|+| |.++|+                      ++  |+|+++.+.++  
T Consensus       155 ~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--  231 (252)
T PRK07035        155 QGIYSITKAAVISMTKAFAKECAPFGIRVNALLP-GLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYL--  231 (252)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEee-ccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHH--
Confidence            2679999999999999999999999999999999 777663                      11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++...+++|+++.+|||+.
T Consensus       232 ~~~~~~~~~g~~~~~dgg~~  251 (252)
T PRK07035        232 ASDASSYTTGECLNVDGGYL  251 (252)
T ss_pred             hCccccCccCCEEEeCCCcC
Confidence            99999999999999999974

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=6.1e-38  Score=262.24  Aligned_cols=218  Identities=29%  Similarity=0.442  Sum_probs=178.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+... .++.++++|+++.++++++++++.+.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHG-DAVVGVEGDVRSLDDHKEAVARCVAAFGKI   80 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC-CceEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            5789999999999999999999999999999999999877766655432 468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCC----hHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTP----KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |++|||||.....  .++.+.+    .++|++++++|+.++++++++++|.|.++ +|+++++||...    ..+.... 
T Consensus        81 d~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~~sS~~~----~~~~~~~-  152 (262)
T TIGR03325        81 DCLIPNAGIWDYS--TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-RGSVIFTISNAG----FYPNGGG-  152 (262)
T ss_pred             CEEEECCCCCccC--CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-CCCEEEEeccce----ecCCCCC-
Confidence            9999998754311  2222222    25799999999999999999999999755 478888885432    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------Hh--HHhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------EA--IASI  226 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~~--~~~~  226 (255)
                        ..|++||+|++++++.++.|++++ ||||+|+| |.++|+                              ++  |+|+
T Consensus       153 --~~Y~~sKaa~~~l~~~la~e~~~~-irvn~i~P-G~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ev  228 (262)
T TIGR03325       153 --PLYTAAKHAVVGLVKELAFELAPY-VRVNGVAP-GGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEY  228 (262)
T ss_pred             --chhHHHHHHHHHHHHHHHHhhccC-eEEEEEec-CCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHh
Confidence              569999999999999999999987 99999999 655442                              11  8999


Q ss_pred             hhhhhhhhccCC-CCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDD-DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~-~~~~~~G~~i~~dgG~~  255 (255)
                      +.++.|+  +++ ...++||++|.+|||+.
T Consensus       229 a~~~~~l--~s~~~~~~~tG~~i~vdgg~~  256 (262)
T TIGR03325       229 TGAYVFF--ATRGDTVPATGAVLNYDGGMG  256 (262)
T ss_pred             hhheeee--ecCCCcccccceEEEecCCee
Confidence            9999999  887 46789999999999974

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.2e-37  Score=259.44  Aligned_cols=217  Identities=28%  Similarity=0.492  Sum_probs=182.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++.+|+++||||++|||++++++|+++|++|+++.++.+. .+++..    .++.++.+|++|+++++++++++.+.++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELRE----KGVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHh----CCCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999988765433 333322    2578899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+...   +.++   .
T Consensus        79 ~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~---~~~~---~  149 (255)
T PRK06463         79 RVDVLVNNAGIMY---LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGT---AAEG---T  149 (255)
T ss_pred             CCCEEEECCCcCC---CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCC---CCCC---c
Confidence            9999999987643   24566778999999999999999999999999998777899999996533211   1111   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IASIANAALYN  233 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~~~l  233 (255)
                      ..|++||+|+++++++++.|++++||+||+|+| +.++|+                         ++  |+|++..+.++
T Consensus       150 ~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  228 (255)
T PRK06463        150 TFYAITKAGIIILTRRLAFELGKYGIRVNAVAP-GWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFL  228 (255)
T ss_pred             cHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHH
Confidence            569999999999999999999999999999999 766553                         11  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...++||+.+.+|||.
T Consensus       229 --~s~~~~~~~G~~~~~dgg~  247 (255)
T PRK06463        229 --ASDDARYITGQVIVADGGR  247 (255)
T ss_pred             --cChhhcCCCCCEEEECCCe
Confidence              8888999999999999996

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-37  Score=264.52  Aligned_cols=219  Identities=26%  Similarity=0.341  Sum_probs=182.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc--chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD--NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~--~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|++.+|+.  +..+++.+...  ..++.++.+|++++++++++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            47889999999999999999999999999999987653  23344433322  245778999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|++||||+...  ...++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..+.    .+.+.. 
T Consensus       126 ~g~id~lv~~Ag~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~iv~iSS~~~~----~~~~~~-  196 (294)
T PRK07985        126 LGGLDIMALVAGKQV--AIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK--GASIITTSSIQAY----QPSPHL-  196 (294)
T ss_pred             hCCCCEEEECCCCCc--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc--CCEEEEECCchhc----cCCCCc-
Confidence            999999999987532  1245677899999999999999999999999999853  4899999965432    222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        ..|++||+|++++++.++.|++++|||||+|+| +.++|+                      ++  |+|++.++.|| 
T Consensus       197 --~~Y~asKaal~~l~~~la~el~~~gIrvn~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL-  272 (294)
T PRK07985        197 --LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP-GPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL-  272 (294)
T ss_pred             --chhHHHHHHHHHHHHHHHHHHhHhCcEEEEEEC-CcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhh-
Confidence              569999999999999999999999999999999 766553                      12  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||+++.+|||+.
T Consensus       273 -~s~~~~~itG~~i~vdgG~~  292 (294)
T PRK07985        273 -ASQESSYVTAEVHGVCGGEH  292 (294)
T ss_pred             -hChhcCCccccEEeeCCCee
Confidence             89999999999999999974

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=260.50  Aligned_cols=218  Identities=29%  Similarity=0.439  Sum_probs=183.5

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++.+|+++|||+++|||++++++|+++|++|+++++++....       ..++.++++|++++++++++++++.+.++
T Consensus         4 ~~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (266)
T PRK06171          4 WLNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ-------HENYQFVPTDVSSAEEVNHTVAEIIEKFG   76 (266)
T ss_pred             cccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc-------cCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            35688999999999999999999999999999999998876432       13678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCc------cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252          101 KLDILVNSGCNLEYRGF------VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      ++|++|||||.......      .+..+.+.++|++++++|+.+++++++++.|+|++++.++||++||...    ..+.
T Consensus        77 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~  152 (266)
T PRK06171         77 RIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG----LEGS  152 (266)
T ss_pred             CCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc----cCCC
Confidence            99999999875432110      1234578999999999999999999999999998777899999995543    2222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh-hh---------------------------------
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-MA---------------------------------  220 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-t~---------------------------------  220 (255)
                      ++.   ..|++||++++++++.++.|++++|||||+|+| +.++ ++                                 
T Consensus       153 ~~~---~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~p-G~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  228 (266)
T PRK06171        153 EGQ---SCYAATKAALNSFTRSWAKELGKHNIRVVGVAP-GILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL  228 (266)
T ss_pred             CCC---chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-cccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC
Confidence            222   679999999999999999999999999999999 5543 10                                 


Q ss_pred             -Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       ++  |+|++.++.||  +++.+.++||++|.+|||++
T Consensus       229 ~r~~~~~eva~~~~fl--~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        229 GRSGKLSEVADLVCYL--LSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             CCCCCHHHhhhheeee--eccccccceeeEEEecCccc
Confidence             11  79999999999  99999999999999999975

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-37  Score=257.14  Aligned_cols=217  Identities=24%  Similarity=0.292  Sum_probs=179.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH--
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK--   98 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~--   98 (255)
                      +++|+++||||++|||++++++|++.|++|++.. ++.+..++...++.  ...+..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            4689999999999999999999999999999875 55555555544442  235778899999999999999888753  


Q ss_pred             --cC--CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           99 --FG--KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        99 --~g--~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                        ++  ++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||...    ..+.
T Consensus        82 ~~~g~~~id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~iv~isS~~~----~~~~  152 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGP---GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD--NSRIINISSAAT----RISL  152 (252)
T ss_pred             hhcCCCCCCEEEECCCcCC---CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc--CCeEEEECCccc----ccCC
Confidence              34  8999999987643   245677889999999999999999999999999954  489999996543    2222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~  230 (255)
                      ++.   ..|++||++++++++.++.|+.++|||||+|+| +.++|+                      ++  |+|+++++
T Consensus       153 ~~~---~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (252)
T PRK12747        153 PDF---IAYSMTKGAINTMTFTLAKQLGARGITVNAILP-GFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  228 (252)
T ss_pred             CCc---hhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEec-CCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHH
Confidence            222   679999999999999999999999999999999 766654                      11  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .||  +++.+.+++|+.+.+|||+.
T Consensus       229 ~~l--~s~~~~~~~G~~i~vdgg~~  251 (252)
T PRK12747        229 AFL--ASPDSRWVTGQLIDVSGGSC  251 (252)
T ss_pred             HHH--cCccccCcCCcEEEecCCcc
Confidence            999  88889999999999999974

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-37  Score=257.94  Aligned_cols=221  Identities=25%  Similarity=0.372  Sum_probs=190.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.+|+++||||+++||++++++|+++|++|++++|+++..+++.++++.  .++.++++|++|+++++++++++.+.+
T Consensus         6 ~~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (255)
T PRK07523          6 FDLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEI   85 (255)
T ss_pred             cCCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999999999998877666666543  358889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||++...   ..++.+.+.++|++++++|+.+++++++.+.+.|++++.++|+++||...    ..+.++   
T Consensus        86 ~~~d~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~----~~~~~~---  155 (255)
T PRK07523         86 GPIDILVNNAGMQF---RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS----ALARPG---  155 (255)
T ss_pred             CCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh----ccCCCC---
Confidence            99999999987653   24667789999999999999999999999999998877899999995432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                      ...|+++|++++++++.++.|++++||+||+|+| +.++++                      ++  |+|++..+.+|  
T Consensus       156 ~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  232 (255)
T PRK07523        156 IAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAP-GYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFL--  232 (255)
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEE-CcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence            2679999999999999999999999999999999 666554                      11  79999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++++.++||+.+.+|||.+
T Consensus       233 ~~~~~~~~~G~~i~~~gg~~  252 (255)
T PRK07523        233 ASDASSFVNGHVLYVDGGIT  252 (255)
T ss_pred             cCchhcCccCcEEEECCCee
Confidence            88889999999999999963

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=7e-38  Score=258.24  Aligned_cols=187  Identities=29%  Similarity=0.394  Sum_probs=164.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CC-ceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQ-DVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~-~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++.||+++|||||+|||.++|.+|+++|++++++.|+...++++.+++.   .. ++.+++||++|.++++++++++..
T Consensus         8 e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~   87 (282)
T KOG1205|consen    8 ERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIR   87 (282)
T ss_pred             HHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999988887777755543   23 599999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++|++|+||||||...   ....++.+.+++.++|++|++|+++++++++|+|++++.|+|+++||+    .+..+.+..
T Consensus        88 ~fg~vDvLVNNAG~~~---~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSi----aG~~~~P~~  160 (282)
T KOG1205|consen   88 HFGRVDVLVNNAGISL---VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSI----AGKMPLPFR  160 (282)
T ss_pred             hcCCCCEEEecCcccc---ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecc----ccccCCCcc
Confidence            9999999999998776   255677888999999999999999999999999998888999999944    444444443


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccC--cEEeEeccCcchhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYG--IRVDCVSHTYGLAMA  220 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~p~~~~~t~  220 (255)
                         +.|++||+|+++|+.+|++|+.+.+  |++ +|+| |.++|.
T Consensus       161 ---~~Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~P-G~V~Te  200 (282)
T KOG1205|consen  161 ---SIYSASKHALEGFFETLRQELIPLGTIIII-LVSP-GPIETE  200 (282)
T ss_pred             ---cccchHHHHHHHHHHHHHHHhhccCceEEE-EEec-Cceeec
Confidence               5799999999999999999999987  666 9999 988887

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-37  Score=256.32  Aligned_cols=222  Identities=30%  Similarity=0.475  Sum_probs=189.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++|||+++|||.+++++|+++|++|++++|+++..++..+++.  ..++..+.+|+++.++++++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            34789999999999999999999999999999999999877666555543  2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|++|||++.....  .++.+.+.+++++++++|+.+++.++++++|.|.+++.++++++||...    ..+.+..  
T Consensus        83 g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~----~~~~~~~--  154 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQ--GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAG----LGAAPKM--  154 (253)
T ss_pred             CCCCEEEECCCCCCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhh----ccCCCCC--
Confidence            9999999998754321  3466789999999999999999999999999998777789999995432    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------h--HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------A--IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------~--~~~~~~~~~~l~  234 (255)
                       ..|++||++++++++.++.|+.++||+|++|+| |.++|+.                       +  |++++..+.|| 
T Consensus       155 -~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l-  231 (253)
T PRK06172        155 -SIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCP-AVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYL-  231 (253)
T ss_pred             -chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-CCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHH-
Confidence             669999999999999999999999999999999 7776640                       1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...++||+.|.+|||+.
T Consensus       232 -~~~~~~~~~G~~i~~dgg~~  251 (253)
T PRK06172        232 -CSDGASFTTGHALMVDGGAT  251 (253)
T ss_pred             -hCccccCcCCcEEEECCCcc
Confidence             88889999999999999973

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-37  Score=263.26  Aligned_cols=220  Identities=20%  Similarity=0.170  Sum_probs=177.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc----------chHHHHHHHhC--CCceEEEEeeCCCHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD----------NLGQALADKLG--HQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~----------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~   90 (255)
                      ++++|+++||||++|||++++++|++.|++|++++|+.          +..+++.+++.  ..++.++++|+++++++++
T Consensus         5 ~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   84 (305)
T PRK08303          5 PLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRA   84 (305)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence            47899999999999999999999999999999999974          23344444432  2357789999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcC-CCccc-cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc
Q 025252           91 LVDTTVAKFGKLDILVNSG-CNLEY-RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA  168 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a-~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~  168 (255)
                      +++++.+.+|++|++|||| +.... ....++.+.+.++|++++++|+.+++.++++++|.|++++.|+||++||..+..
T Consensus        85 ~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~  164 (305)
T PRK08303         85 LVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEY  164 (305)
T ss_pred             HHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccc
Confidence            9999999999999999998 63211 111456677889999999999999999999999999877779999999643211


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------H-h-----
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------E-A-----  222 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~-~-----  222 (255)
                      . ..+..   ....|++||+|+.+|+++|+.|++++|||||+|+| |.++|+                    + +     
T Consensus       165 ~-~~~~~---~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (305)
T PRK08303        165 N-ATHYR---LSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTP-GWLRSEMMLDAFGVTEENWRDALAKEPHFAISET  239 (305)
T ss_pred             c-CcCCC---CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecC-CccccHHHHHhhccCccchhhhhccccccccCCC
Confidence            0 00111   12569999999999999999999999999999999 655443                    1 1     


Q ss_pred             HHhhhhhhhhhhccCCCC-CeeeceeEE
Q 025252          223 IASIANAALYNMAKDDDT-SYVGKQNLL  249 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~-~~~~G~~i~  249 (255)
                      |+|++..++||  +++.. .++||+++.
T Consensus       240 peevA~~v~fL--~s~~~~~~itG~~l~  265 (305)
T PRK08303        240 PRYVGRAVAAL--AADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHH--HcCcchhhcCCcEEE
Confidence            89999999999  88874 699999875

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.3e-37  Score=257.03  Aligned_cols=219  Identities=21%  Similarity=0.275  Sum_probs=183.7

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCc-----------chHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQD-----------NLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.           +...+..+++.  ..++.++++|+++.++
T Consensus         3 ~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~   82 (256)
T PRK12859          3 QLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDA   82 (256)
T ss_pred             CcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            4789999999999  4999999999999999999875421           11223333332  2467889999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCc
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTT  167 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~  167 (255)
                      ++++++++.+.+|++|++||||+...   ..++.+.+.++|++++++|+.+++.+.+.++|.|++++.|+|+++||..+ 
T Consensus        83 i~~~~~~~~~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~-  158 (256)
T PRK12859         83 PKELLNKVTEQLGYPHILVNNAAYST---NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQF-  158 (256)
T ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEccccc-
Confidence            99999999999999999999987643   24667889999999999999999999999999998777899999996532 


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------H---h--HHhhhh
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------E---A--IASIAN  228 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------~---~--~~~~~~  228 (255)
                         ..+.++   ...|++||+++++++++++.|++++||+||+|+| +.++|+              +   +  |+|+++
T Consensus       159 ---~~~~~~---~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~P-G~i~t~~~~~~~~~~~~~~~~~~~~~~~~d~a~  231 (256)
T PRK12859        159 ---QGPMVG---ELAYAATKGAIDALTSSLAAEVAHLGITVNAINP-GPTDTGWMTEEIKQGLLPMFPFGRIGEPKDAAR  231 (256)
T ss_pred             ---CCCCCC---chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEE-ccccCCCCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence               222222   2679999999999999999999999999999999 777764              1   1  999999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCc
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .+.++  +++...+++|+++.+|||+
T Consensus       232 ~~~~l--~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        232 LIKFL--ASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHH--hCccccCccCcEEEeCCCc
Confidence            99999  8888999999999999996

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=4.5e-37  Score=254.74  Aligned_cols=219  Identities=27%  Similarity=0.398  Sum_probs=182.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+... ..+..++. ..++.++.+|++++++++++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4789999999999999999999999999999999987531 12222222 246889999999999999999999998899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++||||+....   .++.+.+.++|++++++|+.+++.+++.++|.|.+++ .++|+++||...    ..+.+..   
T Consensus        81 ~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~----~~~~~~~---  150 (248)
T TIGR01832        81 IDILVNNAGIIRR---ADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS----FQGGIRV---  150 (248)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh----ccCCCCC---
Confidence            9999999876532   3556778899999999999999999999999997655 689999995432    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------------------h--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------------------A--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------------------~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||+++++++++++.|+.++||+||+|+| +.++|+.                      +  |+|++.++.++  +
T Consensus       151 ~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  227 (248)
T TIGR01832       151 PSYTASKHGVAGLTKLLANEWAAKGINVNAIAP-GYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFL--A  227 (248)
T ss_pred             chhHHHHHHHHHHHHHHHHHhCccCcEEEEEEE-CcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH--c
Confidence            569999999999999999999999999999999 7665541                      1  78999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||+.
T Consensus       228 s~~~~~~~G~~i~~dgg~~  246 (248)
T TIGR01832       228 SSASDYVNGYTLAVDGGWL  246 (248)
T ss_pred             CccccCcCCcEEEeCCCEe
Confidence            8889999999999999974

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.1e-37  Score=264.25  Aligned_cols=221  Identities=21%  Similarity=0.246  Sum_probs=169.6

Q ss_pred             eeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH------------hCCC-----ceEEEEeeC
Q 025252           22 YRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALADK------------LGHQ-----DVCYIHCDV   82 (255)
Q Consensus        22 ~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~------------~~~~-----~~~~~~~D~   82 (255)
                      .++.+|+++|||++  +|||+++|+.|+++|++|++.++.+ .++...+.            ....     ++..+.+|+
T Consensus         4 ~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~   82 (299)
T PRK06300          4 IDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASF   82 (299)
T ss_pred             cCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhc
Confidence            46789999999996  9999999999999999999977541 01110000            0000     111122333


Q ss_pred             CCH------------------HHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252           83 SNE------------------REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus        83 ~~~------------------~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                      ++.                  ++++++++++.+++|++|+||||||.... ...++.+.+.++|++++++|+.+++++++
T Consensus        83 ~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~-~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         83 DTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPE-ISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             CCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcc-cCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            333                  46899999999999999999999875421 12567789999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh---
Q 025252          145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA---  220 (255)
Q Consensus       145 ~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~---  220 (255)
                      +++|+|++  .|+|+++||..+.    .+.+...  ..|++||+|+++|+++|+.|+++ +|||||+|+| |.++|+   
T Consensus       162 a~~p~m~~--~G~ii~iss~~~~----~~~p~~~--~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~P-G~v~T~~~~  232 (299)
T PRK06300        162 HFGPIMNP--GGSTISLTYLASM----RAVPGYG--GGMSSAKAALESDTKVLAWEAGRRWGIRVNTISA-GPLASRAGK  232 (299)
T ss_pred             HHHHHhhc--CCeEEEEeehhhc----CcCCCcc--HHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEe-CCccChhhh
Confidence            99999964  4789999854322    2222210  25999999999999999999987 5999999999 766553   


Q ss_pred             -------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                         ++  |+|++..+.|+  +++.+.++||+++.+|||+.
T Consensus       233 ~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L--~s~~~~~itG~~i~vdGG~~  286 (299)
T PRK06300        233 AIGFIERMVDYYQDWAPLPEPMEAEQVGAAAAFL--VSPLASAITGETLYVDHGAN  286 (299)
T ss_pred             cccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCccccCCCCCEEEECCCcc
Confidence                               11  89999999999  99999999999999999974

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-37  Score=255.30  Aligned_cols=220  Identities=32%  Similarity=0.522  Sum_probs=188.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||+++||++++++|+++|++|++++|+.+.. +...+....++.++.+|++++++++++++++.+.+++
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   89 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVA-EVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGR   89 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            568899999999999999999999999999999999987643 3333444456778999999999999999999998999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||++...   ..++.+.+.+++++++++|+.+++++++.+.|.|++++.++|+++||..+    ..+.+..   .
T Consensus        90 ~d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~  159 (255)
T PRK06841         90 IDILVNSAGVAL---LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAG----VVALERH---V  159 (255)
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhh----ccCCCCC---c
Confidence            999999987653   24556778999999999999999999999999998777899999995532    2222222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .|++||++++++++.++.|++++||+||+|+| +.++++                     ++  |+|+++.++++  +++
T Consensus       160 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~  236 (255)
T PRK06841        160 AYCASKAGVVGMTKVLALEWGPYGITVNAISP-TVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFL--ASD  236 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEe-CcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCc
Confidence            69999999999999999999999999999999 776554                     11  88999999999  899


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||+.+.+|||++
T Consensus       237 ~~~~~~G~~i~~dgg~~  253 (255)
T PRK06841        237 AAAMITGENLVIDGGYT  253 (255)
T ss_pred             cccCccCCEEEECCCcc
Confidence            99999999999999974

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=7e-37  Score=254.81  Aligned_cols=217  Identities=25%  Similarity=0.382  Sum_probs=185.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++...++..  .++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999998776666655532  4678899999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++||||+...   ..++.+.+.+++++++++|+.+++++++.+++.|.+.+ .++|+++||..+    ..+.++.   ..
T Consensus        82 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~~  151 (256)
T PRK08643         82 VVVNNAGVAP---TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAG----VVGNPEL---AV  151 (256)
T ss_pred             EEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECcccc----ccCCCCC---ch
Confidence            9999987543   24566778999999999999999999999999997654 478999995432    2233322   66


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |++||++++.+++.++.|+.++||+||+|+| +.++|+                               ++  ++|++.+
T Consensus       152 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  230 (256)
T PRK08643        152 YSSTKFAVRGLTQTAARDLASEGITVNAYAP-GIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANC  230 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHhcccCcEEEEEee-CCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999 766543                               11  7899999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.||  +++.+.++||+++.+|||++
T Consensus       231 ~~~L--~~~~~~~~~G~~i~vdgg~~  254 (256)
T PRK08643        231 VSFL--AGPDSDYITGQTIIVDGGMV  254 (256)
T ss_pred             HHHH--hCccccCccCcEEEeCCCee
Confidence            9999  88999999999999999974

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-37  Score=255.69  Aligned_cols=219  Identities=28%  Similarity=0.408  Sum_probs=187.2

Q ss_pred             eecCeEEEEecCCC-hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGAS-GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~-giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+.+|+++||||++ |||+++++.|+++|++|++++|+.+..++..+++.    ..++.++++|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            36789999999985 99999999999999999999998877666655442    24688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+|++|++|||||...   ..++.+.+.++|++++++|+.+++.+++.++|.|++++ .++|+++||..+    ..+.++
T Consensus        94 ~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~----~~~~~~  166 (262)
T PRK07831         94 RLGRLDVLVNNAGLGG---QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG----WRAQHG  166 (262)
T ss_pred             HcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh----cCCCCC
Confidence            8999999999987543   24567788999999999999999999999999998766 789999985432    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l  233 (255)
                         ...|++||+|++++++.++.|++++|||||+|+| +.++|+                     ++  |+|+++.+.||
T Consensus       167 ---~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l  242 (262)
T PRK07831        167 ---QAHYAAAKAGVMALTRCSALEAAEYGVRINAVAP-SIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFL  242 (262)
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhCccCeEEEEEee-CCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               2669999999999999999999999999999999 777664                     11  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++.+.++||+++.+|+|+
T Consensus       243 --~s~~~~~itG~~i~v~~~~  261 (262)
T PRK07831        243 --ASDYSSYLTGEVVSVSSQH  261 (262)
T ss_pred             --cCchhcCcCCceEEeCCCC
Confidence              9999999999999999986

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.2e-37  Score=255.71  Aligned_cols=217  Identities=22%  Similarity=0.275  Sum_probs=184.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++|||+++|||++++++|+++|++|++++|+++..++..+++.   ..++.++.+|+++++++++++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            35789999999999999999999999999999999999887777666553   24678899999999999888764    


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++|||+|...   ..++.+.+.++|+.++++|+.++++++++++|.|++++.++|+++||..+    ..+...+ 
T Consensus        79 ~g~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~----~~~~~~~-  150 (259)
T PRK06125         79 AGDIDILVNNAGAIP---GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAG----ENPDADY-  150 (259)
T ss_pred             hCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccc----cCCCCCc-
Confidence            478999999987643   24667889999999999999999999999999998777789999995432    2222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------------------------------h--HHhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------------------------------A--IASI  226 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------------------------------~--~~~~  226 (255)
                        ..|+++|+|++++++.++.|+.++|||||+|+| |.++|+.                              +  |+|+
T Consensus       151 --~~y~ask~al~~~~~~la~e~~~~gi~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  227 (259)
T PRK06125        151 --ICGSAGNAALMAFTRALGGKSLDDGVRVVGVNP-GPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEV  227 (259)
T ss_pred             --hHhHHHHHHHHHHHHHHHHHhCccCeEEEEEec-CccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHH
Confidence              568999999999999999999999999999999 7666540                              1  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++.||  +++.+.++||+.+.+|||++
T Consensus       228 a~~~~~l--~~~~~~~~~G~~i~vdgg~~  254 (259)
T PRK06125        228 ADLVAFL--ASPRSGYTSGTVVTVDGGIS  254 (259)
T ss_pred             HHHHHHH--cCchhccccCceEEecCCee
Confidence            9999999  88999999999999999963

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=8.4e-37  Score=260.27  Aligned_cols=218  Identities=26%  Similarity=0.352  Sum_probs=181.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc--hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN--LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~--~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|+++.++.+  ..++..+.+.  ..++.++.+|+++.++++++++++.+.
T Consensus        52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  131 (300)
T PRK06128         52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKE  131 (300)
T ss_pred             ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHH
Confidence            477899999999999999999999999999999877543  2333333332  246788999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++||||+....  ..++.+.+.++|++++++|+.++++++++++|+|++  +++||++||....    .+.+.. 
T Consensus       132 ~g~iD~lV~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~iv~~sS~~~~----~~~~~~-  202 (300)
T PRK06128        132 LGGLDILVNIAGKQTA--VKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP--GASIINTGSIQSY----QPSPTL-  202 (300)
T ss_pred             hCCCCEEEECCcccCC--CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc--CCEEEEECCcccc----CCCCCc-
Confidence            9999999999875432  245677899999999999999999999999999853  4789999965432    222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        ..|++||+++++|++.++.|+.++||+||+|+| +.++|+                      ++  |+|++.++.+| 
T Consensus       203 --~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~P-G~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l-  278 (300)
T PRK06128        203 --LDYASTKAAIVAFTKALAKQVAEKGIRVNAVAP-GPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLL-  278 (300)
T ss_pred             --hhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEE-CcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHH-
Confidence              569999999999999999999999999999999 766554                      11  88999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCc
Q 025252          235 AKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~  254 (255)
                       +++.+.++||+++.+|||.
T Consensus       279 -~s~~~~~~~G~~~~v~gg~  297 (300)
T PRK06128        279 -ASQESSYVTGEVFGVTGGL  297 (300)
T ss_pred             -hCccccCccCcEEeeCCCE
Confidence             8888999999999999996

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-36  Score=252.30  Aligned_cols=222  Identities=29%  Similarity=0.399  Sum_probs=184.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+++|+++||||++|||+++++.|+++|++|++..+ +++..+++.+++. .++.++++|++++++++++++++.+.+++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            467899999999999999999999999999988755 4444555555544 46888999999999999999999888887


Q ss_pred             -ccEEEEcCCCccc---cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252          102 -LDILVNSGCNLEY---RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       102 -id~li~~a~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                       +|++||||+....   ....++.+.+.+++++++++|+.+++++++.++|.|.+++.++|+++||...    ..+.   
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~----~~~~---  153 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF----QNPV---  153 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc----cCCC---
Confidence             9999999864311   1123567789999999999999999999999999997777799999995422    1111   


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~  234 (255)
                      .|...|++||++++++++.+++|+.++|||||+|+| |.++|+                     ++  |+|++.++.+| 
T Consensus       154 ~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~p-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l-  231 (253)
T PRK08642        154 VPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSG-GLLRTTDASAATPDEVFDLIAATTPLRKVTTPQEFADAVLFF-  231 (253)
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEee-cccCCchhhccCCHHHHHHHHhcCCcCCCCCHHHHHHHHHHH-
Confidence            223679999999999999999999999999999999 776663                     12  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.+++|+.+.+|||++
T Consensus       232 -~~~~~~~~~G~~~~vdgg~~  251 (253)
T PRK08642        232 -ASPWARAVTGQNLVVDGGLV  251 (253)
T ss_pred             -cCchhcCccCCEEEeCCCee
Confidence             88889999999999999974

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=252.85  Aligned_cols=214  Identities=31%  Similarity=0.429  Sum_probs=182.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.      .....++.++++|++++++++++++++.+.+++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE------TVDGRPAEFHAADVRDPDQVAALVDAIVERHGR   75 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999998654      112346888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||...   ...+.+.+.++|++++++|+.+++.+++.+.|.|.++ +.++|+++||...    ..+.+..   
T Consensus        76 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~----~~~~~~~---  145 (252)
T PRK07856         76 LDVLVNNAGGSP---YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG----RRPSPGT---  145 (252)
T ss_pred             CCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc----CCCCCCC---
Confidence            999999987553   2455677899999999999999999999999999764 4589999995432    2222223   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||++++++++.++.|+.++ |+||+|+| +.++|+                      ++  |+|+++.+++|  +
T Consensus       146 ~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L--~  221 (252)
T PRK07856        146 AAYGAAKAGLLNLTRSLAVEWAPK-VRVNAVVV-GLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFL--A  221 (252)
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-eEEEEEEe-ccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHH--c
Confidence            679999999999999999999988 99999999 777654                      11  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...++||+.|.+|||++
T Consensus       222 ~~~~~~i~G~~i~vdgg~~  240 (252)
T PRK07856        222 SDLASYVSGANLEVHGGGE  240 (252)
T ss_pred             CcccCCccCCEEEECCCcc
Confidence            8889999999999999974

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-36  Score=253.21  Aligned_cols=217  Identities=25%  Similarity=0.354  Sum_probs=183.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|++. ..+..+++.  ..++.++.+|++++++++++++++.+.++
T Consensus         5 ~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (260)
T PRK12823          5 RFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG   83 (260)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999853 334444432  24677899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....  ..++.+.+.+++++.+++|+.+++++++.++|.|++++.++|+++||....      ..   +.
T Consensus        84 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~------~~---~~  152 (260)
T PRK12823         84 RIDVLINNVGGTIW--AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR------GI---NR  152 (260)
T ss_pred             CCeEEEECCccccC--CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc------CC---CC
Confidence            99999999874321  245677899999999999999999999999999987777899999965432      11   12


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------H---h--HHh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------E---A--IAS  225 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~---~--~~~  225 (255)
                      ..|++||++++++++.++.|++++||+|++|+| +.++|+                              +   +  |+|
T Consensus       153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  231 (260)
T PRK12823        153 VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAP-GGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDE  231 (260)
T ss_pred             CccHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHH
Confidence            569999999999999999999999999999999 665542                              1   1  799


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++++.++  +++...+++|+.+.+|||.
T Consensus       232 va~~~~~l--~s~~~~~~~g~~~~v~gg~  258 (260)
T PRK12823        232 QVAAILFL--ASDEASYITGTVLPVGGGD  258 (260)
T ss_pred             HHHHHHHH--cCcccccccCcEEeecCCC
Confidence            99999999  8888999999999999995

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-36  Score=254.64  Aligned_cols=223  Identities=25%  Similarity=0.408  Sum_probs=191.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +.+++.+|+++|||++++||++++++|+++|++|++++|+++..++..+++..  .++.++++|++++++++++++++.+
T Consensus         4 ~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (265)
T PRK07097          4 NLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEK   83 (265)
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44678999999999999999999999999999999999998777666655532  3688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++|||||....   .++.+.+.+++++++++|+.+++.+++.++|+|++++.++|+++||..+    ..+....
T Consensus        84 ~~~~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~  156 (265)
T PRK07097         84 EVGVIDILVNNAGIIKR---IPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMS----ELGRETV  156 (265)
T ss_pred             hCCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccc----cCCCCCC
Confidence            99999999999876542   4567789999999999999999999999999998877899999995432    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------Hh--HHhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------EA--IASIA  227 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~~--~~~~~  227 (255)
                         ..|+++|++++++++.+++|+.++||+||+|+| +.++|+                            ++  |+|++
T Consensus       157 ---~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  232 (265)
T PRK07097        157 ---SAYAAAKGGLKMLTKNIASEYGEANIQCNGIGP-GYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLA  232 (265)
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEe-ccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHH
Confidence               669999999999999999999999999999999 776553                            01  78899


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .++.++  +++...+++|+++.+|||+.
T Consensus       233 ~~~~~l--~~~~~~~~~g~~~~~~gg~~  258 (265)
T PRK07097        233 GPAVFL--ASDASNFVNGHILYVDGGIL  258 (265)
T ss_pred             HHHHHH--hCcccCCCCCCEEEECCCce
Confidence            999999  88888899999999999973

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.3e-37  Score=254.64  Aligned_cols=217  Identities=20%  Similarity=0.283  Sum_probs=183.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++|||+++|||++++++|+++|++|++++|+++..       ...++.++++|++|+++++++++++.+.+++
T Consensus         5 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   77 (260)
T PRK06523          5 LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-------LPEGVEFVAADLTTAEGCAAVARAVLERLGG   77 (260)
T ss_pred             cCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-------cCCceeEEecCCCCHHHHHHHHHHHHHHcCC
Confidence            458899999999999999999999999999999999986531       1246788999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||..... ..++.+.+.++|++++++|+.+++.+++.++|.|++++.++||++||....    .+.+  .+..
T Consensus        78 id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~----~~~~--~~~~  150 (260)
T PRK06523         78 VDILVHVLGGSSAP-AGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRR----LPLP--ESTT  150 (260)
T ss_pred             CCEEEECCcccccC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEeccccc----CCCC--CCcc
Confidence            99999998754211 245667789999999999999999999999999987777899999965432    1111  1226


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------------------------------h--HHh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------------------------------A--IAS  225 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------------------------------~--~~~  225 (255)
                      .|++||++++++++.++.|++++||+||+|+| +.++|+.                                  +  |+|
T Consensus       151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  229 (260)
T PRK06523        151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSP-GWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEE  229 (260)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHH
Confidence            69999999999999999999999999999999 7665530                                  1  778


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++..+.||  ++++..++||+.+.+|||++
T Consensus       230 va~~~~~l--~s~~~~~~~G~~~~vdgg~~  257 (260)
T PRK06523        230 VAELIAFL--ASDRAASITGTEYVIDGGTV  257 (260)
T ss_pred             HHHHHHHH--hCcccccccCceEEecCCcc
Confidence            89999999  88999999999999999974

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=1.6e-36  Score=252.68  Aligned_cols=219  Identities=32%  Similarity=0.453  Sum_probs=187.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.+|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|+++.++++++++.+.+.+
T Consensus         7 ~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   86 (255)
T PRK06113          7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKL   86 (255)
T ss_pred             cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998877766655543  2367888999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||||+....   .+. +.+.+++++.+++|+.+++++++.++|+|.+++.++|+++||...    ..+..+   
T Consensus        87 ~~~d~li~~ag~~~~---~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~---  155 (255)
T PRK06113         87 GKVDILVNNAGGGGP---KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA----ENKNIN---  155 (255)
T ss_pred             CCCCEEEECCCCCCC---CCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc----cCCCCC---
Confidence            999999999876432   223 578899999999999999999999999997777789999996532    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~  236 (255)
                      ...|++||++++++++.++.|+.+.|||||+|+| +.++|+                     ++  |+|+++++.++  +
T Consensus       156 ~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l--~  232 (255)
T PRK06113        156 MTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP-GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL--C  232 (255)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEec-ccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--c
Confidence            2569999999999999999999999999999999 776653                     11  79999999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++...++||++|.+|||.
T Consensus       233 ~~~~~~~~G~~i~~~gg~  250 (255)
T PRK06113        233 SPAASWVSGQILTVSGGG  250 (255)
T ss_pred             CccccCccCCEEEECCCc
Confidence            899999999999999995

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=9.3e-37  Score=278.31  Aligned_cols=218  Identities=31%  Similarity=0.441  Sum_probs=188.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ...+|+++||||++|||++++++|+++|++|++++|+++..+++.++.+ .++..+.+|++|+++++++++++.+.+|++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  344 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALG-DEHLSVQADITDEAAVESAFAQIQARWGRL  344 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3579999999999999999999999999999999999888877777664 467788999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....  ..++.+.+.++|++++++|+.+++++++.++|+|  ++.|+||++||..+    ..+.++.   ..
T Consensus       345 d~li~nAg~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~g~iv~isS~~~----~~~~~~~---~~  413 (520)
T PRK06484        345 DVLVNNAGIAEV--FKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM--SQGGVIVNLGSIAS----LLALPPR---NA  413 (520)
T ss_pred             CEEEECCCCcCC--CCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh--ccCCEEEEECchhh----cCCCCCC---ch
Confidence            999999876531  2456778999999999999999999999999999  34689999995533    2333333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhhccC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      |++||+++++|++.|+.|++++|||||+|+| +.++|+                       ++  |+|+++.+.||  ++
T Consensus       414 Y~asKaal~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l--~s  490 (520)
T PRK06484        414 YCASKAAVTMLSRSLACEWAPAGIRVNTVAP-GYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFL--AS  490 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe-CCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hC
Confidence            9999999999999999999999999999999 776653                       11  89999999999  88


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.+.++||+++.+|||+.
T Consensus       491 ~~~~~~~G~~i~vdgg~~  508 (520)
T PRK06484        491 PAASYVNGATLTVDGGWT  508 (520)
T ss_pred             ccccCccCcEEEECCCcc
Confidence            889999999999999973

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=248.64  Aligned_cols=204  Identities=21%  Similarity=0.235  Sum_probs=171.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||++|||++++++|+++|++|++++|+.+..++..+++   ++.++++|++++++++++++++.+   ++|++||
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv~   75 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL---DVDAIVCDNTDPASLEEARGLFPH---HLDTIVN   75 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCcEEecCCCCHHHHHHHHHHHhh---cCcEEEE
Confidence            4899999999999999999999999999999987776666554   356789999999999999887643   6999999


Q ss_pred             cCCCccc---cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          108 SGCNLEY---RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       108 ~a~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      ||+....   .....+.+ +.++|++++++|+.+++++++.++|.|++  +|+|+++||..        .+.   ...|+
T Consensus        76 ~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~Iv~isS~~--------~~~---~~~Y~  141 (223)
T PRK05884         76 VPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS--GGSIISVVPEN--------PPA---GSAEA  141 (223)
T ss_pred             CCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCeEEEEecCC--------CCC---ccccH
Confidence            9764211   11112333 57899999999999999999999999953  58999999543        111   25699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------hHHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------AIASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------~~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +||+|+++|++.++.|++++|||||+|+| |.++|+.          -|+|+++.+.||  +++.+.++||+++.+|||+
T Consensus       142 asKaal~~~~~~la~e~~~~gI~v~~v~P-G~v~t~~~~~~~~~p~~~~~~ia~~~~~l--~s~~~~~v~G~~i~vdgg~  218 (223)
T PRK05884        142 AIKAALSNWTAGQAAVFGTRGITINAVAC-GRSVQPGYDGLSRTPPPVAAEIARLALFL--TTPAARHITGQTLHVSHGA  218 (223)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEec-CccCchhhhhccCCCCCCHHHHHHHHHHH--cCchhhccCCcEEEeCCCe
Confidence            99999999999999999999999999999 7777652          179999999999  9999999999999999997

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-36  Score=251.36  Aligned_cols=219  Identities=30%  Similarity=0.462  Sum_probs=187.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+|+++|||+++|||++++++|+++|++|++++|+.+...++.+++. .++.++.+|++|+++++++++++.+.++++
T Consensus         3 ~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (257)
T PRK07067          3 RLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG-PAAIAVSLDVTRQDSIDRIVAAAVERFGGI   81 (257)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999999888777776654 468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |++||||+...   ..++.+.+.+++++++++|+.+++.+++++++.|.+++ +++|+++||..    ...+.+   +..
T Consensus        82 d~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~----~~~~~~---~~~  151 (257)
T PRK07067         82 DILFNNAALFD---MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQA----GRRGEA---LVS  151 (257)
T ss_pred             CEEEECCCcCC---CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHH----hCCCCC---CCc
Confidence            99999987543   24566778999999999999999999999999986653 47899999543    222222   236


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~  228 (255)
                      .|++||++++.+++.++.|+.++||+|++|.| +.++|+                               ++  |+|+++
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~  230 (257)
T PRK07067        152 HYCATKAAVISYTQSAALALIRHGINVNAIAP-GVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTG  230 (257)
T ss_pred             hhhhhHHHHHHHHHHHHHHhcccCeEEEEEee-CcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHH
Confidence            79999999999999999999999999999999 665543                               11  889999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.++  +++...+++|+++.+|||.+
T Consensus       231 ~~~~l--~s~~~~~~~g~~~~v~gg~~  255 (257)
T PRK07067        231 MALFL--ASADADYIVAQTYNVDGGNW  255 (257)
T ss_pred             HHHHH--hCcccccccCcEEeecCCEe
Confidence            99999  88889999999999999964

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-36  Score=250.51  Aligned_cols=216  Identities=25%  Similarity=0.398  Sum_probs=183.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++|||+++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            5889999999999999999999999999999999877766665543  24688999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++|||+|...   ..++.+.+.++|++++++|+.++++++++++|.|.++ ..++|+++||..+    ..+....   ..
T Consensus        81 ~lI~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~----~~~~~~~---~~  150 (252)
T PRK07677         81 ALINNAAGNF---ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA----WDAGPGV---IH  150 (252)
T ss_pred             EEEECCCCCC---CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh----ccCCCCC---cc
Confidence            9999986432   2456788999999999999999999999999998654 3689999995532    2222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhhcc
Q 025252          183 YGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      |++||++++++++.|+.|+.+ +|||||+|+| |.++++                       ++  |+|++.++.++  +
T Consensus       151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~P-G~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~  227 (252)
T PRK07677        151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAP-GPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFL--L  227 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHhCcccCeEEEEEee-cccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHH--c
Confidence            999999999999999999975 7999999999 666531                       11  88999999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++...++||+.+.+|||.
T Consensus       228 ~~~~~~~~g~~~~~~gg~  245 (252)
T PRK07677        228 SDEAAYINGTCITMDGGQ  245 (252)
T ss_pred             CccccccCCCEEEECCCe
Confidence            888899999999999995

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-36  Score=247.22  Aligned_cols=211  Identities=18%  Similarity=0.190  Sum_probs=179.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++|||+++|||++++++|+++|++|++++|+++.++++.+++.  ..++..+.+|++++++++++++++.+.+|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999888777765543  24577889999999999999999999998


Q ss_pred             -CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCC
Q 025252          101 -KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       101 -~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       ++|++|||||....  ..++.+.+.++|.+.+++|+.+++.+++.++|+|.+++ +|+|+++||...    .   +.  
T Consensus        82 ~~iD~li~nag~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~----~---~~--  150 (227)
T PRK08862         82 RAPDVLVNNWTSSPL--PSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD----H---QD--  150 (227)
T ss_pred             CCCCEEEECCccCCC--CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC----C---CC--
Confidence             99999999864332  24567889999999999999999999999999997654 689999995421    1   11  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h---HHhhhhhhhhhhccCCCCCeeeceeEE
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A---IASIANAALYNMAKDDDTSYVGKQNLL  249 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~---~~~~~~~~~~l~~~~~~~~~~~G~~i~  249 (255)
                       ...|++||+|+++|+++++.|++++|||||+|+| |.++|+.      +   .+|++.+..||  ++  +.++||+.+.
T Consensus       151 -~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~P-G~i~t~~~~~~~~~~~~~~~~~~~~~~l--~~--~~~~tg~~~~  224 (227)
T PRK08862        151 -LTGVESSNALVSGFTHSWAKELTPFNIRVGGVVP-SIFSANGELDAVHWAEIQDELIRNTEYI--VA--NEYFSGRVVE  224 (227)
T ss_pred             -cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CcCcCCCccCHHHHHHHHHHHHhheeEE--Ee--cccccceEEe
Confidence             2569999999999999999999999999999999 7887751      1   58899999999  65  6699999876


Q ss_pred             e
Q 025252          250 V  250 (255)
Q Consensus       250 ~  250 (255)
                      .
T Consensus       225 ~  225 (227)
T PRK08862        225 A  225 (227)
T ss_pred             e
Confidence            4

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=4.9e-36  Score=249.54  Aligned_cols=229  Identities=23%  Similarity=0.376  Sum_probs=187.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||++|||+++++.|+++|++|++++|+++..++..+++.    ...+.++.+|++|+++++++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            468999999999999999999999999999999999877766665542    2346677999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---cCcC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EGLC  176 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~~~~  176 (255)
                      +++|++||||+........++.+.+.++++.++++|+.+++.++++++|.|++++.++|+++||..+......   ....
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            9999999998644322224567789999999999999999999999999998777889999996543211100   0111


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------Hh--HHhhhhhhhhhhccCC
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..+...|++||++++++++.++.|+.++||+|++++| +.+.++                ++  |+|+++.+.++  +++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~P-g~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~  238 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSP-GGILDNQPEAFLNAYKKCCNGKGMLDPDDICGTLVFL--LSD  238 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEec-ccccCCCCHHHHHHHHhcCCccCCCCHHHhhhhHhhe--ecc
Confidence            1112369999999999999999999999999999999 544322                11  89999999999  888


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.+++|+++.+|||++
T Consensus       239 ~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        239 QSKYITGQNIIVDDGFS  255 (256)
T ss_pred             ccccccCceEEecCCcc
Confidence            88999999999999974

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=4.3e-36  Score=247.21  Aligned_cols=211  Identities=17%  Similarity=0.173  Sum_probs=174.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||++|||++++++|+++|++|++++|+++...+....   ..+.++.+|++++++++++++++.+.++++|++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   78 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQ---AGAQCIQADFSTNAGIMAFIDELKQHTDGLRAI   78 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHH---cCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence            57899999999999999999999999999999987644333322   246788999999999999999999999999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      |||||....   ....+.+.++|++++++|+.+++.+++.++|.|++++  .++|+++||..    ...+.+..   ..|
T Consensus        79 v~~ag~~~~---~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~----~~~~~~~~---~~Y  148 (236)
T PRK06483         79 IHNASDWLA---EKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYV----VEKGSDKH---IAY  148 (236)
T ss_pred             EECCccccC---CCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchh----hccCCCCC---ccH
Confidence            999875432   2345668899999999999999999999999997765  68899998543    22222222   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh--HHhhhhhhhhhhccCCCCCee
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA--IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~--~~~~~~~~~~l~~~~~~~~~~  243 (255)
                      ++||++++++++.++.|+++ +||||+|+| +.+.++                  ++  |+|+++.+.||  ++  +.++
T Consensus       149 ~asKaal~~l~~~~a~e~~~-~irvn~v~P-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~--~~~~  222 (236)
T PRK06483        149 AASKAALDNMTLSFAAKLAP-EVKVNSIAP-ALILFNEGDDAAYRQKALAKSLLKIEPGEEEIIDLVDYL--LT--SCYV  222 (236)
T ss_pred             HHHHHHHHHHHHHHHHHHCC-CcEEEEEcc-CceecCCCCCHHHHHHHhccCccccCCCHHHHHHHHHHH--hc--CCCc
Confidence            99999999999999999988 599999999 554321                  11  89999999999  65  6799


Q ss_pred             eceeEEecCCcC
Q 025252          244 GKQNLLVNGGFR  255 (255)
Q Consensus       244 ~G~~i~~dgG~~  255 (255)
                      ||+++.+|||+.
T Consensus       223 ~G~~i~vdgg~~  234 (236)
T PRK06483        223 TGRSLPVDGGRH  234 (236)
T ss_pred             CCcEEEeCcccc
Confidence            999999999963

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=4.2e-36  Score=250.32  Aligned_cols=220  Identities=25%  Similarity=0.370  Sum_probs=189.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++|+++|||+++|||++++++|+++|++|++++|+.+..++..+++.    ..++.++.+|++++++++++++++.+
T Consensus         5 ~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   84 (257)
T PRK09242          5 WRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVED   84 (257)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877776665543    34688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++|||||...   ..++.+.+.+++++++++|+.+++.++++++|+|++++.++|+++||..+.    .+... 
T Consensus        85 ~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~----~~~~~-  156 (257)
T PRK09242         85 HWDGLHILVNNAGGNI---RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGL----THVRS-  156 (257)
T ss_pred             HcCCCCEEEECCCCCC---CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccC----CCCCC-
Confidence            9999999999987643   245667899999999999999999999999999987778899999965332    22222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l  233 (255)
                        ...|+++|++++.+++.++.|+.++||+||+|+| +.++|+                   +   +  +++++.++.++
T Consensus       157 --~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~P-g~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  233 (257)
T PRK09242        157 --GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAP-WYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFL  233 (257)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEE-CCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              2669999999999999999999999999999999 777654                   1   1  78999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...+++|+.+.+|||.
T Consensus       234 --~~~~~~~~~g~~i~~~gg~  252 (257)
T PRK09242        234 --CMPAASYITGQCIAVDGGF  252 (257)
T ss_pred             --hCcccccccCCEEEECCCe
Confidence              7788889999999999985

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=5e-36  Score=250.47  Aligned_cols=221  Identities=29%  Similarity=0.429  Sum_probs=185.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++|+++||||++|||++++++|+++|++|+++.|+. +...+..+++.  ..++.++.+|++|.++++++++++.+.
T Consensus         3 ~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~   82 (261)
T PRK08936          3 SDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKE   82 (261)
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999988854 33444444432  246778999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++++|++||||+....   .++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+|+++||...    ..+.+. 
T Consensus        83 ~g~id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~----~~~~~~-  154 (261)
T PRK08936         83 FGTLDVMINNAGIENA---VPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHE----QIPWPL-  154 (261)
T ss_pred             cCCCCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc----cCCCCC-
Confidence            9999999999875432   4556778999999999999999999999999997654 589999995432    222222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l  233 (255)
                        ...|+++|+|++++++.++.|+.++||+|++|+| +.++|+                      ++  ++|+++.+.||
T Consensus       155 --~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  231 (261)
T PRK08936        155 --FVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGP-GAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWL  231 (261)
T ss_pred             --CcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE-CcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence              2679999999999999999999999999999999 776654                      01  78999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.+++|+++++|||..
T Consensus       232 --~s~~~~~~~G~~i~~d~g~~  251 (261)
T PRK08936        232 --ASSEASYVTGITLFADGGMT  251 (261)
T ss_pred             --cCcccCCccCcEEEECCCcc
Confidence              88999999999999999963

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-36  Score=253.49  Aligned_cols=213  Identities=23%  Similarity=0.280  Sum_probs=172.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..+++..  .++.++++|++|+++++++++++ +.++++
T Consensus         1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~i   77 (275)
T PRK06940          1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPV   77 (275)
T ss_pred             CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCC
Confidence            3689999998 699999999996 899999999988776666655542  36788999999999999999988 567899


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----------
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----------  172 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----------  172 (255)
                      |++|||||...          ..++|++++++|+.+++++++.++|.|++  +++++++||..+......          
T Consensus        78 d~li~nAG~~~----------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~iv~isS~~~~~~~~~~~~~~~~~~~  145 (275)
T PRK06940         78 TGLVHTAGVSP----------SQASPEAILKVDLYGTALVLEEFGKVIAP--GGAGVVIASQSGHRLPALTAEQERALAT  145 (275)
T ss_pred             CEEEECCCcCC----------chhhHHHHHHHhhHHHHHHHHHHHHHHhh--CCCEEEEEecccccCcccchhhhccccc
Confidence            99999987532          23679999999999999999999999954  367788886544322100          


Q ss_pred             ---------cC--cC--CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------
Q 025252          173 ---------EG--LC--NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------  220 (255)
Q Consensus       173 ---------~~--~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------  220 (255)
                               +.  +.  ..+...|++||+|++++++.++.|+.++|||||+|+| |.++|+                   
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~  224 (275)
T PRK06940        146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISP-GIISTPLAQDELNGPRGDGYRNMFA  224 (275)
T ss_pred             cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEecc-CcCcCccchhhhcCCchHHHHHHhh
Confidence                     00  00  0123679999999999999999999999999999999 766554                   


Q ss_pred             -----Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -----EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -----~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                           ++  |+|++.++.||  +++.+.++||+.+.+|||++
T Consensus       225 ~~p~~r~~~peeia~~~~fL--~s~~~~~itG~~i~vdgg~~  264 (275)
T PRK06940        225 KSPAGRPGTPDEIAALAEFL--MGPRGSFITGSDFLVDGGAT  264 (275)
T ss_pred             hCCcccCCCHHHHHHHHHHH--cCcccCcccCceEEEcCCeE
Confidence                 11  89999999999  99999999999999999963

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.9e-36  Score=249.72  Aligned_cols=222  Identities=27%  Similarity=0.382  Sum_probs=191.5

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++.+|+++|||++++||++++++|+++|++|++++|+++.+.++.+++.  ..++.++.+|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            456899999999999999999999999999999999999877666655543  245889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++|||++...   ..++.+.+.++|++++++|+.+++.+.+.++|.|.+++.++++++||..    ...+.++. 
T Consensus        86 ~~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~----~~~~~~~~-  157 (256)
T PRK06124         86 HGRLDILVNNVGARD---RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIA----GQVARAGD-  157 (256)
T ss_pred             cCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeech----hccCCCCc-
Confidence            999999999987543   2456678899999999999999999999999999877789999999543    22233333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        ..|+++|++++++++.++.|+.+.||+|++|+| +.++|+                      ++  ++|++.++.++ 
T Consensus       158 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l-  233 (256)
T PRK06124        158 --AVYPAAKQGLTGLMRALAAEFGPHGITSNAIAP-GYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFL-  233 (256)
T ss_pred             --cHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEE-CCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence              679999999999999999999999999999999 777664                      01  88999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||+.+.+|||+.
T Consensus       234 -~~~~~~~~~G~~i~~dgg~~  253 (256)
T PRK06124        234 -ASPAASYVNGHVLAVDGGYS  253 (256)
T ss_pred             -cCcccCCcCCCEEEECCCcc
Confidence             89999999999999999974

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.7e-36  Score=249.19  Aligned_cols=220  Identities=27%  Similarity=0.437  Sum_probs=183.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+|+++||||++|||++++++|+++|++|++++|+++. .+..+++.  ..++.++.+|++++++++++++++.+.++
T Consensus         3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   81 (263)
T PRK08226          3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEG   81 (263)
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999998753 22322221  24678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+...   ..++.+.+.+++++++++|+.+++.+++.++|++++++.++|+++||..+.   ..+.+.   .
T Consensus        82 ~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~---~~~~~~---~  152 (263)
T PRK08226         82 RIDILVNNAGVCR---LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGD---MVADPG---E  152 (263)
T ss_pred             CCCEEEECCCcCC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc---ccCCCC---c
Confidence            9999999987643   245667788999999999999999999999999977777899999854321   111122   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------H---h--HHhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------E---A--IASIANAA  230 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~---~--~~~~~~~~  230 (255)
                      ..|+++|++++++++.++.|+.++||+|++|+| +.++|+                         +   +  |+|+++.+
T Consensus       153 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~  231 (263)
T PRK08226        153 TAYALTKAAIVGLTKSLAVEYAQSGIRVNAICP-GYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELA  231 (263)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHH
Confidence            569999999999999999999999999999999 666553                         1   1  88999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .||  +++.+.++||+++.+|||.+
T Consensus       232 ~~l--~~~~~~~~~g~~i~~dgg~~  254 (263)
T PRK08226        232 AFL--ASDESSYLTGTQNVIDGGST  254 (263)
T ss_pred             HHH--cCchhcCCcCceEeECCCcc
Confidence            999  88889999999999999974

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.4e-37  Score=232.55  Aligned_cols=216  Identities=25%  Similarity=0.293  Sum_probs=182.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++.|+.+++||+..|||+++++.|++.|++|+.+.|+++.+..+..+.+ ..+.++..|+++.+...+.+..    .+.
T Consensus         3 t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p-~~I~Pi~~Dls~wea~~~~l~~----v~p   77 (245)
T KOG1207|consen    3 TSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETP-SLIIPIVGDLSAWEALFKLLVP----VFP   77 (245)
T ss_pred             ccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCC-cceeeeEecccHHHHHHHhhcc----cCc
Confidence            35789999999999999999999999999999999999999988887765 4588999999987766555544    368


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc-CCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|.++||||..-.   .++.+.+.+.++..|++|+.+.+.+.|....-+. +..+|.|+|+||..    ...+..+   +
T Consensus        78 idgLVNNAgvA~~---~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqa----s~R~~~n---H  147 (245)
T KOG1207|consen   78 IDGLVNNAGVATN---HPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQA----SIRPLDN---H  147 (245)
T ss_pred             hhhhhccchhhhc---chHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchh----cccccCC---c
Confidence            9999999887653   6778899999999999999999999999665444 34578899999543    3333333   3


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      +.|+++|+|++++||+||-|+.+++||||+++| -.+-|.                      +|  .+|+.+++.||  +
T Consensus       148 tvYcatKaALDmlTk~lAlELGp~kIRVNsVNP-TVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfL--L  224 (245)
T KOG1207|consen  148 TVYCATKAALDMLTKCLALELGPQKIRVNSVNP-TVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFL--L  224 (245)
T ss_pred             eEEeecHHHHHHHHHHHHHhhCcceeEeeccCC-eEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheee--e
Confidence            789999999999999999999999999999999 443332                      23  89999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+.++..||.+++++||++
T Consensus       225 Sd~ssmttGstlpveGGfs  243 (245)
T KOG1207|consen  225 SDNSSMTTGSTLPVEGGFS  243 (245)
T ss_pred             ecCcCcccCceeeecCCcc
Confidence            9999999999999999985

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=249.79  Aligned_cols=221  Identities=24%  Similarity=0.295  Sum_probs=182.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-------HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-------GQALADKLG--HQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.       +.+..+++.  ..++.++.+|++++++++++++
T Consensus         3 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~   82 (273)
T PRK08278          3 SLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVA   82 (273)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence            4688999999999999999999999999999999997642       233333332  2468889999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~  173 (255)
                      ++.+.++++|++||||+...   ..+..+.+.+++++++++|+.++++++++++|.|++++.++|+++|+..    ...+
T Consensus        83 ~~~~~~g~id~li~~ag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~----~~~~  155 (273)
T PRK08278         83 KAVERFGGIDICVNNASAIN---LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPL----NLDP  155 (273)
T ss_pred             HHHHHhCCCCEEEECCCCcC---CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCch----hccc
Confidence            99999999999999987543   2456678899999999999999999999999999887788999998542    1111


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------Hh--HHhhhhhhhhhhccCC
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      . ...+...|++||++++++++.++.|+.++||+||+|+||+.++|+             ++  |+++++.++++  +++
T Consensus       156 ~-~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~~~~~~~~~~~p~~va~~~~~l--~~~  232 (273)
T PRK08278        156 K-WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLGGDEAMRRSRTPEIMADAAYEI--LSR  232 (273)
T ss_pred             c-ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhcccccccccccCCHHHHHHHHHHH--hcC
Confidence            1 001236799999999999999999999999999999995466664             11  89999999999  888


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      ...++||+.+ +|+++
T Consensus       233 ~~~~~~G~~~-~~~~~  247 (273)
T PRK08278        233 PAREFTGNFL-IDEEV  247 (273)
T ss_pred             ccccceeEEE-eccch
Confidence            8889999976 78875

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=9.3e-36  Score=254.47  Aligned_cols=222  Identities=26%  Similarity=0.381  Sum_probs=183.3

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++..++++|+++||||++|||++++++|+++|++|++.+++. +..++..+++.  ..++.++.+|++|++++++++++
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            3445678999999999999999999999999999999998754 34445544443  24688899999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-------CCCcEEEeccCCCc
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-------RRGCILYTTGTGTT  167 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~ii~is~~~~~  167 (255)
                      +.+ +|++|++|||||....   ..+.+.+.++|+.++++|+.+++++++.+.|+|+++       ..|+|+++||..+ 
T Consensus        84 ~~~-~g~iD~li~nAG~~~~---~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~-  158 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGITRD---RMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG-  158 (306)
T ss_pred             HHH-hCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc-
Confidence            998 9999999999876542   345677899999999999999999999999998643       1479999995432 


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh-HHhhhh
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA-IASIAN  228 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~-~~~~~~  228 (255)
                         ..+.+..   ..|++||++++++++.++.|+.++||+||+|+|| . .|+                  ++ |++++.
T Consensus       159 ---~~~~~~~---~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~-~t~~~~~~~~~~~~~~~~~~~~~~pe~va~  230 (306)
T PRK07792        159 ---LVGPVGQ---ANYGAAKAGITALTLSAARALGRYGVRANAICPR-A-RTAMTADVFGDAPDVEAGGIDPLSPEHVVP  230 (306)
T ss_pred             ---ccCCCCC---chHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-C-CCchhhhhccccchhhhhccCCCCHHHHHH
Confidence               2222222   5699999999999999999999999999999994 2 221                  11 789999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCc
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .+.||  +++...++||+++.+|||.
T Consensus       231 ~v~~L--~s~~~~~~tG~~~~v~gg~  254 (306)
T PRK07792        231 LVQFL--ASPAAAEVNGQVFIVYGPM  254 (306)
T ss_pred             HHHHH--cCccccCCCCCEEEEcCCe
Confidence            99999  8888889999999999985

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.9e-35  Score=246.12  Aligned_cols=220  Identities=30%  Similarity=0.445  Sum_probs=184.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++.+|+++||||+++||++++++|+++|++|++++|+.+...+..+++. .++.++++|++++++++++++++.+.+|+
T Consensus         6 ~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   84 (255)
T PRK05717          6 PGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALG-ENAWFIAMDVADEAQVAAGVAEVLGQFGR   84 (255)
T ss_pred             cccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcC-CceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            45789999999999999999999999999999999998776666555543 46888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||||+..... ..++.+.+.++|++++++|+.+++.+++++.|+|.++ .++|+++||...    ..+.+..   .
T Consensus        85 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~g~ii~~sS~~~----~~~~~~~---~  155 (255)
T PRK05717         85 LDALVCNAAIADPH-NTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH-NGAIVNLASTRA----RQSEPDT---E  155 (255)
T ss_pred             CCEEEECCCcccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CcEEEEEcchhh----cCCCCCC---c
Confidence            99999998765321 2456677899999999999999999999999998654 578999985432    2222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .|++||++++.+++.++.++... |+|++++| +.++|+                     ++  |+|++.++.++  +++
T Consensus       156 ~Y~~sKaa~~~~~~~la~~~~~~-i~v~~i~P-g~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~  231 (255)
T PRK05717        156 AYAASKGGLLALTHALAISLGPE-IRVNAVSP-GWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWL--LSR  231 (255)
T ss_pred             chHHHHHHHHHHHHHHHHHhcCC-CEEEEEec-ccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHHHHHH--cCc
Confidence            69999999999999999999874 99999999 777652                     01  77899999999  788


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+.+.+|||++
T Consensus       232 ~~~~~~g~~~~~~gg~~  248 (255)
T PRK05717        232 QAGFVTGQEFVVDGGMT  248 (255)
T ss_pred             hhcCccCcEEEECCCce
Confidence            88899999999999963

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-35  Score=246.27  Aligned_cols=220  Identities=24%  Similarity=0.322  Sum_probs=186.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+.+|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++++++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999877777666653  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....  ..++.+.+.+++++++++|+.+++.+++++.+.|+++ .++|+++||...    ..+.++   .
T Consensus        82 ~~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~ii~~sS~~~----~~~~~~---~  151 (258)
T PRK07890         82 RVDALVNNAFRVPS--MKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES-GGSIVMINSMVL----RHSQPK---Y  151 (258)
T ss_pred             CccEEEECCccCCC--CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCEEEEEechhh----ccCCCC---c
Confidence            99999999875432  2456678899999999999999999999999998654 479999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~  227 (255)
                      ..|+++|++++.+++.++.|++++||+|++++| +.+.++                               ++  ++|++
T Consensus       152 ~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva  230 (258)
T PRK07890        152 GAYKMAKGALLAASQSLATELGPQGIRVNSVAP-GYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVA  230 (258)
T ss_pred             chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeC-CccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHH
Confidence            679999999999999999999999999999999 665443                               01  68999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.++  +++...+++|+++.+|||++
T Consensus       231 ~a~~~l--~~~~~~~~~G~~i~~~gg~~  256 (258)
T PRK07890        231 SAVLFL--ASDLARAITGQTLDVNCGEY  256 (258)
T ss_pred             HHHHHH--cCHhhhCccCcEEEeCCccc
Confidence            999999  77777899999999999974

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=2.2e-35  Score=246.03  Aligned_cols=218  Identities=27%  Similarity=0.378  Sum_probs=182.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++|++|+++.+ +.+..+++.+++.  ..++.++.+|++++++++++++++.+.+++
T Consensus         1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   80 (256)
T PRK12743          1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR   80 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            3678999999999999999999999999998865 4444555554442  246889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||++....   ..+.+.+.+++++++++|+.+++++++++.++|.+++ .++||++||..    ...+..+.   
T Consensus        81 id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~----~~~~~~~~---  150 (256)
T PRK12743         81 IDVLVNNAGAMTK---APFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVH----EHTPLPGA---  150 (256)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecc----ccCCCCCc---
Confidence            9999999876542   3556788999999999999999999999999996543 58999999543    22222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+++|++++++++.++.++.++||+|++|+| +.++|+                    ++  |+|++..+.++  +++
T Consensus       151 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~  227 (256)
T PRK12743        151 SAYTAAKHALGGLTKAMALELVEHGILVNAVAP-GAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVAWL--CSE  227 (256)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe-CCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--hCc
Confidence            679999999999999999999999999999999 776654                    11  88999999999  888


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+.+.+|||++
T Consensus       228 ~~~~~~G~~~~~dgg~~  244 (256)
T PRK12743        228 GASYTTGQSLIVDGGFM  244 (256)
T ss_pred             cccCcCCcEEEECCCcc
Confidence            89999999999999963

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-35  Score=244.84  Aligned_cols=217  Identities=27%  Similarity=0.414  Sum_probs=182.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+++||||+++||++++++|+++|++|++++|+.+..++..+++.    ..++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999998876666655442    246889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|.+++ .++|+++||..    +..+.+.   .
T Consensus        82 id~vv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~----~~~~~~~---~  151 (259)
T PRK12384         82 VDLLVYNAGIAKA---AFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKS----GKVGSKH---N  151 (259)
T ss_pred             CCEEEECCCcCCC---CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcc----cccCCCC---C
Confidence            9999999875542   4566789999999999999999999999999997766 68999998543    2222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~  227 (255)
                      ..|++||+|++++++.++.|++++||+|++|.||..+.++                               ++  ++|++
T Consensus       152 ~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~  231 (259)
T PRK12384        152 SGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVL  231 (259)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHH
Confidence            6799999999999999999999999999999994332221                               11  78999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++.++  +++.+.+++|+++.+|||.
T Consensus       232 ~~~~~l--~~~~~~~~~G~~~~v~~g~  256 (259)
T PRK12384        232 NMLLFY--ASPKASYCTGQSINVTGGQ  256 (259)
T ss_pred             HHHHHH--cCcccccccCceEEEcCCE
Confidence            999999  8888889999999999996

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-35  Score=244.98  Aligned_cols=222  Identities=25%  Similarity=0.376  Sum_probs=188.7

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ...++.+|+++||||+++||++++++|+++|++|++++|+++.++++..++.  ..++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (258)
T PRK06949          3 RSINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAET   82 (258)
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999887777665542  24688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--------CCcEEEeccCCCccc
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--------RGCILYTTGTGTTAC  169 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--------~~~ii~is~~~~~~~  169 (255)
                      .++++|++|||++....   .++.+.+.++++.++++|+.+++.+++.++|.|.++.        .++++++||....  
T Consensus        83 ~~~~~d~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--  157 (258)
T PRK06949         83 EAGTIDILVNNSGVSTT---QKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGL--  157 (258)
T ss_pred             hcCCCCEEEECCCCCCC---CCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECccccc--
Confidence            89999999999875432   4556678899999999999999999999999986553        4789999855332  


Q ss_pred             ccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhh
Q 025252          170 TEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASI  226 (255)
Q Consensus       170 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~  226 (255)
                        .+.+.   ...|+++|++++.+++.++.|+.++||+|++|+| +.++|+                     ++  |+|+
T Consensus       158 --~~~~~---~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~p-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  231 (258)
T PRK06949        158 --RVLPQ---IGLYCMSKAAVVHMTRAMALEWGRHGINVNAICP-GYIDTEINHHHWETEQGQKLVSMLPRKRVGKPEDL  231 (258)
T ss_pred             --CCCCC---ccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEee-CCCcCCcchhccChHHHHHHHhcCCCCCCcCHHHH
Confidence              22222   2569999999999999999999999999999999 777654                     11  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++.+.||  +++.+.+++|+.+.+|||+
T Consensus       232 ~~~~~~l--~~~~~~~~~G~~i~~dgg~  257 (258)
T PRK06949        232 DGLLLLL--AADESQFINGAIISADDGF  257 (258)
T ss_pred             HHHHHHH--hChhhcCCCCcEEEeCCCC
Confidence            9999999  8899999999999999997

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=6e-35  Score=242.46  Aligned_cols=214  Identities=28%  Similarity=0.370  Sum_probs=183.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++|||++++||++++++|+++|++|++++|+.      ... ...++.++++|++++++++++++++.+.+++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   76 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LTQ-EDYPFATFVLDVSDAAAVAQVCQRLLAETGP   76 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hhh-cCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            568899999999999999999999999999999999976      111 1246888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||++...   ..++.+.+.+++++++++|+.+++++++.+.|.|++++.++|+++||...    ..+..+   ..
T Consensus        77 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~----~~~~~~---~~  146 (252)
T PRK08220         77 LDVLVNAAGILR---MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA----HVPRIG---MA  146 (252)
T ss_pred             CCEEEECCCcCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh----ccCCCC---Cc
Confidence            999999987654   24566778999999999999999999999999998777889999995432    222222   26


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------Hh--HHhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------EA--IASIANA  229 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~~--~~~~~~~  229 (255)
                      .|++||++++++++.++.|++++||+|+++.| +.++|+                              ++  |+|++++
T Consensus       147 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  225 (252)
T PRK08220        147 AYGASKAALTSLAKCVGLELAPYGVRCNVVSP-GSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANA  225 (252)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhHhCeEEEEEec-CcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHH
Confidence            79999999999999999999999999999999 655443                              11  7999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++|  +++...+++|+++.+|||.+
T Consensus       226 ~~~l--~~~~~~~~~g~~i~~~gg~~  249 (252)
T PRK08220        226 VLFL--ASDLASHITLQDIVVDGGAT  249 (252)
T ss_pred             HHHH--hcchhcCccCcEEEECCCee
Confidence            9999  88889999999999999964

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.3e-35  Score=267.37  Aligned_cols=220  Identities=32%  Similarity=0.485  Sum_probs=189.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ..++|+++|||+++|||++++++|+++|++|++++|+.+.++++.++++ .++.++.+|++++++++++++++.+.++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLG-PDHHALAMDVSDEAQIREGFEQLHREFGRI   80 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            3578999999999999999999999999999999999888877777664 467789999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-cEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |++|||||.... ...++.+.+.++|++++++|+.+++.++++++|+|++++.| +|+++||..+    ..+.+..   .
T Consensus        81 D~li~nag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~----~~~~~~~---~  152 (520)
T PRK06484         81 DVLVNNAGVTDP-TMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAG----LVALPKR---T  152 (520)
T ss_pred             CEEEECCCcCCC-CCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCccc----CCCCCCC---c
Confidence            999999876321 12456678999999999999999999999999999766555 9999995433    3333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------h--HHhhhhhhhhhhcc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------A--IASIANAALYNMAK  236 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------~--~~~~~~~~~~l~~~  236 (255)
                      .|+++|+++++|++.++.|+.++||||++|+| +.++|+.                       +  |+++++.+.++  +
T Consensus       153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l--~  229 (520)
T PRK06484        153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLP-GYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFL--A  229 (520)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEcc-CCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence            79999999999999999999999999999999 6666541                       1  78899999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++...+++|+.+.+|||+
T Consensus       230 ~~~~~~~~G~~~~~~gg~  247 (520)
T PRK06484        230 SDQASYITGSTLVVDGGW  247 (520)
T ss_pred             CccccCccCceEEecCCe
Confidence            888999999999999996

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.2e-35  Score=243.67  Aligned_cols=220  Identities=20%  Similarity=0.241  Sum_probs=183.2

Q ss_pred             eecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCc-----------chHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           23 RLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQD-----------NLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        23 ~~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~-----------~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      ++++|+++||||++  |||.+++++|+++|++|++++|++           ....++.+++.  ..++.++.+|+++.++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            46889999999994  999999999999999999999872           21111323222  2468899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCc
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTT  167 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~  167 (255)
                      ++.+++++.+.++++|++||||+...   ..+..+.+.+++++.+++|+.+++++++++++.|.++..++|+++||... 
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~-  157 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYST---HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS-  157 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc-
Confidence            99999999999999999999987543   24566788999999999999999999999999997777789999995432 


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh--HHhhhh
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA--IASIAN  228 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~--~~~~~~  228 (255)
                         ..+.++   ...|++||++++++++.++.|+...||+|++++| +.++|+                 ++  |+|+++
T Consensus       158 ---~~~~~~---~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~a~  230 (256)
T PRK12748        158 ---LGPMPD---ELAYAATKGAIEAFTKSLAPELAEKGITVNAVNP-GPTDTGWITEELKHHLVPKFPQGRVGEPVDAAR  230 (256)
T ss_pred             ---cCCCCC---chHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEe-CcccCCCCChhHHHhhhccCCCCCCcCHHHHHH
Confidence               222222   2569999999999999999999999999999999 767664                 11  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++  +++....++|+++.+|||+|
T Consensus       231 ~~~~l--~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        231 LIAFL--VSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHH--hCcccccccCCEEEecCCcc
Confidence            99999  88888899999999999986

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.9e-35  Score=238.89  Aligned_cols=204  Identities=25%  Similarity=0.382  Sum_probs=178.7

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +..+..|++++||||++||||++|.+|+++|+.++++|.+.+...+..++... +++..+.||+++++++.+..+++++.
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999999887777777653 47999999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      .|.+|++|||||....   .++.+.+.+++++++++|+.++++.+++|+|.|.++..|.||+++    |..+..+.++. 
T Consensus       112 ~G~V~ILVNNAGI~~~---~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~Ia----S~aG~~g~~gl-  183 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTG---KKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIA----SVAGLFGPAGL-  183 (300)
T ss_pred             cCCceEEEeccccccC---CCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEeh----hhhcccCCccc-
Confidence            9999999999987753   567789999999999999999999999999999999999999999    44445555555 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcc---cCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGR---YGIRVDCVSHTYGLAMA------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~---~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~  234 (255)
                        ..|++||+|+.++.++|..|++.   +||+...|+| +++.|.            |+  |+.++..++.-+
T Consensus       184 --~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P-~~i~Tgmf~~~~~~~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  184 --ADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCP-YFINTGMFDGATPFPTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             --hhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEee-eeccccccCCCCCCccccCCCCHHHHHHHHHHHH
Confidence              67999999999999999999864   4699999999 988876            11  788888776553

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=8.6e-35  Score=240.77  Aligned_cols=219  Identities=24%  Similarity=0.322  Sum_probs=182.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |++|+++|||+++|||++++++|+++|++|++.. ++.....+..+++.  ..++..+.+|++|.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999998854 44444444444332  23577889999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....   .++.+.+.++|++++++|+.+++.+++.++|.|++++.++|+++||...    ..+..+.   
T Consensus        81 ~id~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~~---  150 (246)
T PRK12938         81 EIDVLVNNAGITRD---VVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNG----QKGQFGQ---  150 (246)
T ss_pred             CCCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhc----cCCCCCC---
Confidence            99999999876432   3566789999999999999999999999999998777789999995432    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+++|++++++++.+++|+.++||++++|+| +.+.|+                    ++  ++++++.+.++  +++
T Consensus       151 ~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l--~~~  227 (246)
T PRK12938        151 TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSP-GYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWL--ASE  227 (246)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe-cccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHHHH--cCc
Confidence            669999999999999999999999999999999 777665                    01  78999999999  888


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+.+.+|||+.
T Consensus       228 ~~~~~~g~~~~~~~g~~  244 (246)
T PRK12938        228 ESGFSTGADFSLNGGLH  244 (246)
T ss_pred             ccCCccCcEEEECCccc
Confidence            89999999999999963

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-34  Score=239.66  Aligned_cols=217  Identities=28%  Similarity=0.421  Sum_probs=183.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+++..++..++++ .++.++++|+++.+++.++++++.+.++++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELG-ESALVIRADAGDVAAQKALAQALAEAFGRL   81 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            3678999999999999999999999999999999999877777666654 467889999999999999999999988999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+...   ..++.+.+.+++++++++|+.+++.++++++|+|.+  .+++++++|..    ...+.+.   ...
T Consensus        82 d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~i~~~S~~----~~~~~~~---~~~  149 (249)
T PRK06500         82 DAVFINAGVAK---FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN--PASIVLNGSIN----AHIGMPN---SSV  149 (249)
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEechH----hccCCCC---ccH
Confidence            99999987543   245567789999999999999999999999999853  46788777432    2222222   267


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |+++|++++++++.++.|++++||+|++++| +.++|+                       +   +  ++++++++.++ 
T Consensus       150 Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l-  227 (249)
T PRK06500        150 YAASKAALLSLAKTLSGELLPRGIRVNAVSP-GPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYL-  227 (249)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 766654                       0   1  78999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...+++|+.+.+|||.+
T Consensus       228 -~~~~~~~~~g~~i~~~gg~~  247 (249)
T PRK06500        228 -ASDESAFIVGSEIIVDGGMS  247 (249)
T ss_pred             -cCccccCccCCeEEECCCcc
Confidence             88888999999999999964

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-34  Score=242.52  Aligned_cols=220  Identities=25%  Similarity=0.336  Sum_probs=183.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~   84 (264)
T PRK07576          5 FDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEF   84 (264)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999998776665544442  2356788999999999999999999989


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||||+...   ..++.+.+.+++++++++|+.++++++++++|.|+++ +|+|+++||..+.    .+.+..  
T Consensus        85 ~~iD~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~-~g~iv~iss~~~~----~~~~~~--  154 (264)
T PRK07576         85 GPIDVLVSGAAGNF---PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP-GASIIQISAPQAF----VPMPMQ--  154 (264)
T ss_pred             CCCCEEEECCCCCC---CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCEEEEECChhhc----cCCCCc--
Confidence            99999999976432   2456678899999999999999999999999999644 4899999954322    222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh-hh-------------------H---h--HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-MA-------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-t~-------------------~---~--~~~~~~~~~~l~  234 (255)
                       ..|+++|+++++|++.++.|+.++||+|++|+| +.++ ++                   +   +  |+|++..+.++ 
T Consensus       155 -~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~p-g~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  231 (264)
T PRK07576        155 -AHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVP-GPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFL-  231 (264)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-ccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence             569999999999999999999999999999999 5553 22                   0   1  78999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...+++|+++.+|||++
T Consensus       232 -~~~~~~~~~G~~~~~~gg~~  251 (264)
T PRK07576        232 -ASDMASYITGVVLPVDGGWS  251 (264)
T ss_pred             -cChhhcCccCCEEEECCCcc
Confidence             88888899999999999974

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-34  Score=242.99  Aligned_cols=221  Identities=30%  Similarity=0.358  Sum_probs=184.7

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.. ..++..+.+.  ..++.++.+|+++.++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45788999999999999999999999999999999998854 3334433332  24688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++||||+....  ...+.+.+.++|++++++|+.+++.+++++++.|++  .++||++||..+.    .+.+..
T Consensus       121 ~~~~iD~lI~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~--~g~iV~isS~~~~----~~~~~~  192 (290)
T PRK06701        121 ELGRLDILVNNAAFQYP--QQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ--GSAIINTGSITGY----EGNETL  192 (290)
T ss_pred             HcCCCCEEEECCcccCC--CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh--CCeEEEEeccccc----CCCCCc
Confidence            99999999999875432  135677899999999999999999999999999853  4789999965432    222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~  234 (255)
                         ..|++||++++.+++.++.++.++||+|++|+| +.++|+                     ++  ++|++++++++ 
T Consensus       193 ---~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~p-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  267 (290)
T PRK06701        193 ---IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAP-GPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPAYVFL-  267 (290)
T ss_pred             ---chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHHHH-
Confidence               569999999999999999999999999999999 777664                     11  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.+++|+++.+|||.+
T Consensus       268 -l~~~~~~~~G~~i~idgg~~  287 (290)
T PRK06701        268 -ASPDSSYITGQMLHVNGGVI  287 (290)
T ss_pred             -cCcccCCccCcEEEeCCCcc
Confidence             88889999999999999964

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-34  Score=240.16  Aligned_cols=218  Identities=26%  Similarity=0.361  Sum_probs=181.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++|++|+++||||++|||++++++|+++|++|++++|+++.. +..+++.  ..++.++.+|++++++++++++++.+.+
T Consensus         3 ~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (258)
T PRK08628          3 LNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF   81 (258)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence            468999999999999999999999999999999999987765 4444432  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||||....   ..+.+ +.++|++.+++|+.+++.+.+.++|.++++ .++|+++||...    ..+..   +
T Consensus        82 ~~id~vi~~ag~~~~---~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~----~~~~~---~  149 (258)
T PRK08628         82 GRIDGLVNNAGVNDG---VGLEA-GREAFVASLERNLIHYYVMAHYCLPHLKAS-RGAIVNISSKTA----LTGQG---G  149 (258)
T ss_pred             CCCCEEEECCcccCC---CcccC-CHHHHHHHHhhhhHHHHHHHHHHHHHhhcc-CcEEEEECCHHh----ccCCC---C
Confidence            999999999875431   23344 349999999999999999999999998654 588999995433    22222   2


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAA  230 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~  230 (255)
                      ...|++||++++++++.++.|+.++||+|++|.| +.++|+                           ++  |+++++.+
T Consensus       150 ~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  228 (258)
T PRK08628        150 TSGYAAAKGAQLALTREWAVALAKDGVRVNAVIP-AEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTA  228 (258)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHH
Confidence            3679999999999999999999999999999999 655443                           11  78899999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .++  +++...+++|+.+.+|||++
T Consensus       229 ~~l--~~~~~~~~~g~~~~~~gg~~  251 (258)
T PRK08628        229 VFL--LSERSSHTTGQWLFVDGGYV  251 (258)
T ss_pred             HHH--hChhhccccCceEEecCCcc
Confidence            999  88888999999999999974

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.6e-34  Score=238.27  Aligned_cols=221  Identities=33%  Similarity=0.472  Sum_probs=188.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+++...++...+. ..++.++.+|++|+++++++++++.+.+++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999999999999999999999999999999999877766665543 245888999999999999999999888899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||+++....  ..++.+.+.+++++.+++|+.+++.+++.+++.+++++.++|+++||....    .+.++.   .
T Consensus        82 ~d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~~~---~  152 (251)
T PRK07231         82 VDILVNNAGTTHR--NGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGL----RPRPGL---G  152 (251)
T ss_pred             CCEEEECCCCCCC--CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc----CCCCCc---h
Confidence            9999999875432  244567789999999999999999999999999987778899999965432    222222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhhc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~~  235 (255)
                      .|+.+|++++.+++.++.+++++||+|++++| +.++|+                        ++  ++|++.++.++  
T Consensus       153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  229 (251)
T PRK07231        153 WYNASKGAVITLTKALAAELGPDKIRVNAVAP-VVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFL--  229 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEE-CccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHH--
Confidence            69999999999999999999999999999999 655543                        01  78999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++...+++|+.+.+|||.+
T Consensus       230 ~~~~~~~~~g~~~~~~gg~~  249 (251)
T PRK07231        230 ASDEASWITGVTLVVDGGRC  249 (251)
T ss_pred             hCccccCCCCCeEEECCCcc
Confidence            78888899999999999964

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.1e-34  Score=238.98  Aligned_cols=219  Identities=22%  Similarity=0.345  Sum_probs=184.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEE-EecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~-~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |.+|+++||||+++||++++++|+++|++|++ ..|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            56789999999999999999999999999876 4777766656555442  24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+...   ..++.+.+.++++..+++|+.+++.++++++|.|++++.++|+++||....    .+.+   +.
T Consensus        82 ~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----~~~~---~~  151 (250)
T PRK08063         82 RLDVFVNNAASGV---LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSI----RYLE---NY  151 (250)
T ss_pred             CCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc----cCCC---Cc
Confidence            9999999986543   246677889999999999999999999999999988888999999964322    1222   22


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||+++++++++++.|+.+.||++++|.| +.+.++                      ++  ++|+++.+.++  +
T Consensus       152 ~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~--~  228 (250)
T PRK08063        152 TTVGVSKAALEALTRYLAVELAPKGIAVNAVSG-GAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFL--C  228 (250)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEec-CcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHH--c
Confidence            569999999999999999999999999999999 665543                      11  78999999998  7


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+.+.+|||.+
T Consensus       229 ~~~~~~~~g~~~~~~gg~~  247 (250)
T PRK08063        229 SPEADMIRGQTIIVDGGRS  247 (250)
T ss_pred             CchhcCccCCEEEECCCee
Confidence            7777899999999999963

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-34  Score=238.27  Aligned_cols=219  Identities=33%  Similarity=0.477  Sum_probs=184.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|++|+++||||++|||++++++|+++|++|++++|+....++..+++.   ..++++|+++.++++++++++.+.++++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~i   80 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG---GLFVPTDVTDEDAVNALFDTAAETYGSV   80 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            3789999999999999999999999999999999998877666655543   2578999999999999999999888999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+..... ..++.+.+.+.+++++++|+.+++++++.++|.|++++.++|+++||..+.    .+..  .+...
T Consensus        81 d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~----~g~~--~~~~~  153 (255)
T PRK06057         81 DIAFNNAGISPPE-DDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAV----MGSA--TSQIS  153 (255)
T ss_pred             CEEEECCCcCCCC-CCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhc----cCCC--CCCcc
Confidence            9999998764321 234567788999999999999999999999999987778899999854321    1111  11256


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------h--HHhhhhhhhhhhccC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------A--IASIANAALYNMAKD  237 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------~--~~~~~~~~~~l~~~~  237 (255)
                      |++||++++++++.++.++.++||+|++|+| +.++|+.                       +  |+|++.++.++  ++
T Consensus       154 Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l--~~  230 (255)
T PRK06057        154 YTASKGGVLAMSRELGVQFARQGIRVNALCP-GPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFL--AS  230 (255)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEee-CCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hC
Confidence            9999999999999999999999999999999 7776641                       1  78999999999  88


Q ss_pred             CCCCeeeceeEEecCCc
Q 025252          238 DDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~  254 (255)
                      +...+++|+.+.+|||.
T Consensus       231 ~~~~~~~g~~~~~~~g~  247 (255)
T PRK06057        231 DDASFITASTFLVDGGI  247 (255)
T ss_pred             ccccCccCcEEEECCCe
Confidence            88999999999999996

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=4.5e-34  Score=235.15  Aligned_cols=211  Identities=23%  Similarity=0.373  Sum_probs=172.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++|+++||||++|||++++++|+++|++|+++.++ ++..+++.++.   .+.++.+|++|.+++.+++++    ++++
T Consensus         4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~~----~~~i   76 (237)
T PRK12742          4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVRK----SGAL   76 (237)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHHH----hCCC
Confidence            678999999999999999999999999999887664 44455554443   356788999999988777653    4789


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....   ....+.+.++|++++++|+.+++.+++.+++.|+  +.++|+++||.....   .+.+   +...
T Consensus        77 d~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~~~~---~~~~---~~~~  145 (237)
T PRK12742         77 DILVVNAGIAVF---GDALELDADDIDRLFKINIHAPYHASVEAARQMP--EGGRIIIIGSVNGDR---MPVA---GMAA  145 (237)
T ss_pred             cEEEECCCCCCC---CCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHh--cCCeEEEEecccccc---CCCC---CCcc
Confidence            999999875432   3455678999999999999999999999999985  357899999653211   1112   2367


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhccCCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      |+++|++++++++.++.|+.++|||||+|+| +.++|+                   ++  |+|+++.+.||  +++.+.
T Consensus       146 Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~p~~~a~~~~~l--~s~~~~  222 (237)
T PRK12742        146 YAASKSALQGMARGLARDFGPRGITINVVQP-GPIDTDANPANGPMKDMMHSFMAIKRHGRPEEVAGMVAWL--AGPEAS  222 (237)
T ss_pred             hHHhHHHHHHHHHHHHHHHhhhCeEEEEEec-CcccCCccccccHHHHHHHhcCCCCCCCCHHHHHHHHHHH--cCcccC
Confidence            9999999999999999999999999999999 777664                   11  88999999999  889999


Q ss_pred             eeeceeEEecCCcC
Q 025252          242 YVGKQNLLVNGGFR  255 (255)
Q Consensus       242 ~~~G~~i~~dgG~~  255 (255)
                      ++||+++.+|||+.
T Consensus       223 ~~~G~~~~~dgg~~  236 (237)
T PRK12742        223 FVTGAMHTIDGAFG  236 (237)
T ss_pred             cccCCEEEeCCCcC
Confidence            99999999999973

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-34  Score=238.28  Aligned_cols=225  Identities=28%  Similarity=0.420  Sum_probs=187.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||+++||.+++++|+++|++|++++|+.+..+...+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999998776666655443  2467789999999999999999999988


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHH-hcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARV-MVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +++|++||||+...   ..+..+.+.+.|++++++|+.+++++++++.|+ |.+++.++++++||.........   ...
T Consensus        88 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~---~~~  161 (259)
T PRK08213         88 GHVDILVNNAGATW---GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPP---EVM  161 (259)
T ss_pred             CCCCEEEECCCCCC---CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCc---ccc
Confidence            99999999977542   134566788999999999999999999999998 76666789999996543221111   112


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~  236 (255)
                      +...|+++|++++++++.++++++++||++++++| +.++|+                 +   +  ++|++..+.++  +
T Consensus       162 ~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~  238 (259)
T PRK08213        162 DTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAP-GFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAALLL--A  238 (259)
T ss_pred             CcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEec-CcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence            23679999999999999999999999999999999 776664                 0   1  78999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.+++|+.+.+|||.+
T Consensus       239 ~~~~~~~~G~~~~~~~~~~  257 (259)
T PRK08213        239 SDASKHITGQILAVDGGVS  257 (259)
T ss_pred             CccccCccCCEEEECCCee
Confidence            8999999999999999963

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=236.05  Aligned_cols=217  Identities=24%  Similarity=0.330  Sum_probs=174.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc----chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD----NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      +++++|+++|||+++|||++++++|+++|++|+++.++.    +..++..+++.  ..++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            346889999999999999999999999999977765432    23333333332  246888999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEe-ccCCCcccccccC
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYT-TGTGTTACTEIEG  174 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~i-s~~~~~~~~~~~~  174 (255)
                      .+.++++|++|||||...   ..++.+.+.+++++++++|+.+++.++++++|.|.+  .++++++ ||....   .  .
T Consensus        84 ~~~~~~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~iv~~~ss~~~~---~--~  153 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVL---KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND--NGKIVTLVTSLLGA---F--T  153 (257)
T ss_pred             HHhhCCCCEEEECCcccC---CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc--CCCEEEEecchhcc---c--C
Confidence            998999999999987543   245567789999999999999999999999999853  3667665 432211   1  1


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASI  226 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~  226 (255)
                      +..   ..|++||+|+++++++++.|+.++||+|++++| +.+.|+                          ++  ++|+
T Consensus       154 ~~~---~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv  229 (257)
T PRK12744        154 PFY---SAYAGSKAPVEHFTRAASKEFGARGISVTAVGP-GPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDI  229 (257)
T ss_pred             CCc---ccchhhHHHHHHHHHHHHHHhCcCceEEEEEec-CccccchhccccccchhhcccccccccccccCCCCCHHHH
Confidence            122   569999999999999999999999999999999 666543                          12  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +..+.++  +++ ..+++|+++.+|||+.
T Consensus       230 a~~~~~l--~~~-~~~~~g~~~~~~gg~~  255 (257)
T PRK12744        230 VPFIRFL--VTD-GWWITGQTILINGGYT  255 (257)
T ss_pred             HHHHHHh--hcc-cceeecceEeecCCcc
Confidence            9999999  765 6799999999999974

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=236.20  Aligned_cols=208  Identities=24%  Similarity=0.385  Sum_probs=173.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++|||+++|||++++++|+++|++|++++|+.....       ..++.++.+|++++      ++++.+.++++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~-------~~~~~~~~~D~~~~------~~~~~~~~~~i   68 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL-------SGNFHFLQLDLSDD------LEPLFDWVPSV   68 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc-------CCcEEEEECChHHH------HHHHHHhhCCC
Confidence            478899999999999999999999999999999998754321       24678899999887      44455556899


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+....  ..++.+.+.+++++++++|+.+++++++.++|.+++++.++|+++||..+    ..+.++.   ..
T Consensus        69 d~lv~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~~  139 (235)
T PRK06550         69 DILCNTAGILDD--YKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS----FVAGGGG---AA  139 (235)
T ss_pred             CEEEECCCCCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh----ccCCCCC---cc
Confidence            999999875432  24556788999999999999999999999999998777899999995432    2222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhccCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      |+++|++++++++.++.|++++||+|++|+| +.++|+                      ++  |+|+++.+.++  +++
T Consensus       140 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l--~s~  216 (235)
T PRK06550        140 YTASKHALAGFTKQLALDYAKDGIQVFGIAP-GAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFL--ASG  216 (235)
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHH--cCh
Confidence            9999999999999999999999999999999 766554                      12  89999999999  888


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+++.+|||++
T Consensus       217 ~~~~~~g~~~~~~gg~~  233 (235)
T PRK06550        217 KADYMQGTIVPIDGGWT  233 (235)
T ss_pred             hhccCCCcEEEECCcee
Confidence            89999999999999974

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=6.5e-34  Score=235.89  Aligned_cols=211  Identities=19%  Similarity=0.177  Sum_probs=173.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||++|||++++++|+ +|++|++++|+++.++++.+++..   ..+.++.+|++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 599999999998888777766542   2477899999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++|||||....   .+..+.+.+.+++++++|+.+++++++.++|.|.+++ +|+|+++||..+    ..+.+..   ..
T Consensus        80 ~lv~nag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~----~~~~~~~---~~  149 (246)
T PRK05599         80 LAVVAFGILGD---QERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAG----WRARRAN---YV  149 (246)
T ss_pred             EEEEecCcCCC---chhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEecccc----ccCCcCC---cc
Confidence            99999876432   2334566778889999999999999999999997664 689999995533    2233233   66


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------H---hHHhhhhhhhhhhccCCCCCeeeceeEEec
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------E---AIASIANAALYNMAKDDDTSYVGKQNLLVN  251 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------~---~~~~~~~~~~~l~~~~~~~~~~~G~~i~~d  251 (255)
                      |++||+|++++++.++.|++++|||||+++| |.++|+        +   .|||+++.++++  ++....   ++.++++
T Consensus       150 Y~asKaa~~~~~~~la~el~~~~I~v~~v~P-G~v~T~~~~~~~~~~~~~~pe~~a~~~~~~--~~~~~~---~~~~~~~  223 (246)
T PRK05599        150 YGSTKAGLDAFCQGLADSLHGSHVRLIIARP-GFVIGSMTTGMKPAPMSVYPRDVAAAVVSA--ITSSKR---STTLWIP  223 (246)
T ss_pred             hhhHHHHHHHHHHHHHHHhcCCCceEEEecC-CcccchhhcCCCCCCCCCCHHHHHHHHHHH--HhcCCC---CceEEeC
Confidence            9999999999999999999999999999999 888775        1   189999999999  443322   4557777


Q ss_pred             CCc
Q 025252          252 GGF  254 (255)
Q Consensus       252 gG~  254 (255)
                      |++
T Consensus       224 ~~~  226 (246)
T PRK05599        224 GRL  226 (246)
T ss_pred             ccH
Confidence            764

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.8e-34  Score=235.32  Aligned_cols=219  Identities=29%  Similarity=0.358  Sum_probs=186.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++..+++..  .++.++.+|++++++++++++++.+.+++
T Consensus         5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   84 (250)
T PRK12939          5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG   84 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6789999999999999999999999999999999988776666555432  46888999999999999999999998899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||++....   ..+.+.+.+++++++++|+.+++.+++.+.|.+.+++.|+++++||...    ..+.+..   .
T Consensus        85 id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---~  154 (250)
T PRK12939         85 LDGLVNNAGITNS---KSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA----LWGAPKL---G  154 (250)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh----ccCCCCc---c
Confidence            9999999775432   4556778999999999999999999999999998877889999995432    2222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .|+++|++++++++.++.++++.+|+|++|+| +.++|+                     ++  ++|+++++.++  +++
T Consensus       155 ~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~  231 (250)
T PRK12939        155 AYVASKGAVIGMTRSLARELGGRGITVNAIAP-GLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAVLFL--LSD  231 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEE-CCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--hCc
Confidence            69999999999999999999999999999999 676554                     01  79999999999  777


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+.|.+|||.+
T Consensus       232 ~~~~~~G~~i~~~gg~~  248 (250)
T PRK12939        232 AARFVTGQLLPVNGGFV  248 (250)
T ss_pred             cccCccCcEEEECCCcc
Confidence            78899999999999974

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=6e-34  Score=238.78  Aligned_cols=216  Identities=24%  Similarity=0.340  Sum_probs=168.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhC---CCceEEEEeeCCCHHHH----HHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLG---HQDVCYIHCDVSNEREV----INLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~----~~~~~~~~~~   98 (255)
                      ++++||||++|||++++++|+++|++|+++.|+ ++...++.+++.   ..++.++.+|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            579999999999999999999999999997654 455555555543   23567789999999865    5566666677


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCCh-----------HHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEe
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPK-----------SDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYT  161 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~i  161 (255)
                      +|++|+||||||....   .++.+.+.           +++++++++|+.+++++++.++|.|+.+      ..++|+++
T Consensus        82 ~g~iD~lv~nAG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~  158 (267)
T TIGR02685        82 FGRCDVLVNNASAFYP---TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNL  158 (267)
T ss_pred             cCCceEEEECCccCCC---CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEe
Confidence            8999999999875432   22222222           3589999999999999999999998543      24678888


Q ss_pred             ccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh
Q 025252          162 TGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA  222 (255)
Q Consensus       162 s~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~  222 (255)
                      +|...    ..+.++.   ..|++||++++++++.|+.|+.++||+|++|+| +.++++                   ++
T Consensus       159 ~s~~~----~~~~~~~---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (267)
T TIGR02685       159 CDAMT----DQPLLGF---TMYTMAKHALEGLTRSAALELAPLQIRVNGVAP-GLSLLPDAMPFEVQEDYRRKVPLGQRE  230 (267)
T ss_pred             hhhhc----cCCCccc---chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEec-CCccCccccchhHHHHHHHhCCCCcCC
Confidence            84432    2222222   679999999999999999999999999999999 654321                   12


Q ss_pred             --HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          223 --IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        |+++++.++++  +++...+++|+.+.+|||++
T Consensus       231 ~~~~~va~~~~~l--~~~~~~~~~G~~~~v~gg~~  263 (267)
T TIGR02685       231 ASAEQIADVVIFL--VSPKAKYITGTCIKVDGGLS  263 (267)
T ss_pred             CCHHHHHHHHHHH--hCcccCCcccceEEECCcee
Confidence              89999999999  88889999999999999974

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-34  Score=235.31  Aligned_cols=221  Identities=33%  Similarity=0.448  Sum_probs=187.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |++++|+++||||+++||++++++|+++|++|++++|+.+...+..+++. ..++.++++|++|+++++++++++.+.++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~   80 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWG   80 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999999876666555543 24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||++....   ....+.+.+++++++++|+.+++.+++.+++.|++++.++|+++||...    ..+....   
T Consensus        81 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~----~~~~~~~---  150 (252)
T PRK06138         81 RLDVLVNNAGFGCG---GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLA----LAGGRGR---  150 (252)
T ss_pred             CCCEEEECCCCCCC---CCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhh----ccCCCCc---
Confidence            99999999875432   3456678999999999999999999999999998777889999995532    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAALY  232 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~~~  232 (255)
                      ..|+++|++++.+++.++.|++..||+|+++.| +.+.++                          .+  +++++..+.+
T Consensus       151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  229 (252)
T PRK06138        151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAP-GTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALF  229 (252)
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEE-CCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            669999999999999999999999999999999 555432                          02  7888889988


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  +++...+++|+.+.+||||+
T Consensus       230 l--~~~~~~~~~g~~~~~~~g~~  250 (252)
T PRK06138        230 L--ASDESSFATGTTLVVDGGWL  250 (252)
T ss_pred             H--cCchhcCccCCEEEECCCee
Confidence            8  77888899999999999985

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=1.5e-33  Score=234.39  Aligned_cols=216  Identities=26%  Similarity=0.427  Sum_probs=183.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++|||++++||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++|+++++++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            679999999999999999999999999999998776666555443  246888999999999999999999999999999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +|||++...   ..++.+.+.+++++++++|+.+++++++.+++.|++++ +++++++||...    ..+.+..   ..|
T Consensus        81 vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~~Y  150 (254)
T TIGR02415        81 MVNNAGVAP---ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAG----HEGNPIL---SAY  150 (254)
T ss_pred             EEECCCcCC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhh----cCCCCCC---cch
Confidence            999987643   24566788999999999999999999999999997764 478999985432    2223323   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------------h--HHhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------------A--IASIANAA  230 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------------~--~~~~~~~~  230 (255)
                      ++||++++++++.++.|+++.||+|++++| +.++|+.                               +  |+++++++
T Consensus       151 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P-g~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  229 (254)
T TIGR02415       151 SSTKFAVRGLTQTAAQELAPKGITVNAYCP-GIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLV  229 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEec-CcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999999999 6665541                               1  68999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .++  +++...+++|+++.+|||.+
T Consensus       230 ~~l--~~~~~~~~~g~~~~~d~g~~  252 (254)
T TIGR02415       230 SFL--ASEDSDYITGQSILVDGGMV  252 (254)
T ss_pred             Hhh--cccccCCccCcEEEecCCcc
Confidence            999  88888899999999999975

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-33  Score=235.91  Aligned_cols=219  Identities=26%  Similarity=0.381  Sum_probs=185.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+.+.  ..++.++.+|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999877666665543  24678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||||+....   ..+.+.+.+++++++++|+.+++.+.+.+.|.|.+ ++.++++++||..+    ..+.++.  
T Consensus        87 ~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~----~~~~~~~--  157 (263)
T PRK07814         87 RLDIVVNNVGGTMP---NPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMG----RLAGRGF--  157 (263)
T ss_pred             CCCEEEECCCCCCC---CChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccc----cCCCCCC--
Confidence            99999999875432   45567889999999999999999999999999976 46689999995433    2233333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||++++.+++.++.|+.+ +|+|++|+| +.+.|+                      ++  ++|++..++++  
T Consensus       158 -~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--  232 (263)
T PRK07814        158 -AAYGTAKAALAHYTRLAALDLCP-RIRVNAIAP-GSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYL--  232 (263)
T ss_pred             -chhHHHHHHHHHHHHHHHHHHCC-CceEEEEEe-CCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             67999999999999999999987 699999999 666543                      01  88999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++...+++|+.+.+|||.+
T Consensus       233 ~~~~~~~~~g~~~~~~~~~~  252 (263)
T PRK07814        233 ASPAGSYLTGKTLEVDGGLT  252 (263)
T ss_pred             cCccccCcCCCEEEECCCcc
Confidence            88888899999999999963

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-34  Score=244.37  Aligned_cols=201  Identities=26%  Similarity=0.324  Sum_probs=173.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   83 (330)
T PRK06139          4 PLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGG   83 (330)
T ss_pred             CCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence            4678999999999999999999999999999999999888877766653  24677889999999999999999998889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||...   ..++.+.+.+++++++++|+.+++++++.++|+|++++.|+||++||..+    ..+.+..   
T Consensus        84 ~iD~lVnnAG~~~---~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~----~~~~p~~---  153 (330)
T PRK06139         84 RIDVWVNNVGVGA---VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGG----FAAQPYA---  153 (330)
T ss_pred             CCCEEEECCCcCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh----cCCCCCc---
Confidence            9999999987654   35677889999999999999999999999999998888899999995542    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhccc-CcEEeEeccCcchhhhH-----------------h--HHhhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRY-GIRVDCVSHTYGLAMAE-----------------A--IASIANAALYNM  234 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~p~~~~~t~~-----------------~--~~~~~~~~~~l~  234 (255)
                      ..|++||+++.+|+++|+.|+.+. ||+|++|+| +.++|+.                 +  |++++..++.++
T Consensus       154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~P-g~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~il~~~  226 (330)
T PRK06139        154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYP-AFMDTPGFRHGANYTGRRLTPPPPVYDPRRVAKAVVRLA  226 (330)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEec-CCccCcccccccccccccccCCCCCCCHHHHHHHHHHHH
Confidence            679999999999999999999875 899999999 8887751                 1  889999998873

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.8e-33  Score=232.47  Aligned_cols=218  Identities=31%  Similarity=0.418  Sum_probs=185.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||+++||++++++|+++|+.|++.+|+.+..+++.+..+ .++.++.+|+++.++++++++++.+.++++
T Consensus         3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (245)
T PRK12936          3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELG-ERVKIFPANLSDRDEVKALGQKAEADLEGV   81 (245)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999988877776665553 468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+....   .++.+.+.+++++++++|+.+++++++.+.+.+.+++.++++++||...    ..+.+..   ..
T Consensus        82 d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~~  151 (245)
T PRK12936         82 DILVNNAGITKD---GLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVG----VTGNPGQ---AN  151 (245)
T ss_pred             CEEEECCCCCCC---CccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHh----CcCCCCC---cc
Confidence            999999876432   3455678899999999999999999999999887777789999995432    2222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |+++|+++.++++.++.++.+.|+++++++| +.++++                    ++  +++++..+.++  +++..
T Consensus       152 Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l--~~~~~  228 (245)
T PRK12936        152 YCASKAGMIGFSKSLAQEIATRNVTVNCVAP-GFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVAYL--ASSEA  228 (245)
T ss_pred             hHHHHHHHHHHHHHHHHHhhHhCeEEEEEEE-CcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHH--cCccc
Confidence            9999999999999999999999999999999 666653                    01  68999999999  77788


Q ss_pred             CeeeceeEEecCCc
Q 025252          241 SYVGKQNLLVNGGF  254 (255)
Q Consensus       241 ~~~~G~~i~~dgG~  254 (255)
                      .+++|+++.+|||.
T Consensus       229 ~~~~G~~~~~~~g~  242 (245)
T PRK12936        229 AYVTGQTIHVNGGM  242 (245)
T ss_pred             cCcCCCEEEECCCc
Confidence            89999999999996

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=1.2e-33  Score=233.05  Aligned_cols=213  Identities=21%  Similarity=0.313  Sum_probs=177.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++|||+++|||++++++|+++|++|++++|.. +..++..+++.  ..++.++.+|++++++++++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999999988653 44444444442  2468899999999999999999999889999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHH-HHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA-RVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      |||+|....   .++.+.+.++|+.++++|+.+++++.+.++ |.+++++.++|+++||..+    ..+.+..   ..|+
T Consensus        81 i~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~----~~~~~~~---~~Y~  150 (239)
T TIGR01831        81 VLNAGITRD---AAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSG----VMGNRGQ---VNYS  150 (239)
T ss_pred             EECCCCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhh----ccCCCCC---cchH
Confidence            999876432   345667899999999999999999999875 6666566789999995432    2222222   5699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------H---h--HHhhhhhhhhhhccCCCCCee
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------E---A--IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~---~--~~~~~~~~~~l~~~~~~~~~~  243 (255)
                      ++|++++.+++.++.|++++||+|++++| +.++|+                +   +  |+|+++.+.||  +++.+.++
T Consensus       151 ~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~~~~~~  227 (239)
T TIGR01831       151 AAKAGLIGATKALAVELAKRKITVNCIAP-GLIDTEMLAEVEHDLDEALKTVPMNRMGQPAEVASLAGFL--MSDGASYV  227 (239)
T ss_pred             HHHHHHHHHHHHHHHHHhHhCeEEEEEEE-ccCccccchhhhHHHHHHHhcCCCCCCCCHHHHHHHHHHH--cCchhcCc
Confidence            99999999999999999999999999999 777775                1   1  89999999999  88999999


Q ss_pred             eceeEEecCCc
Q 025252          244 GKQNLLVNGGF  254 (255)
Q Consensus       244 ~G~~i~~dgG~  254 (255)
                      +|+.+.+|||.
T Consensus       228 ~g~~~~~~gg~  238 (239)
T TIGR01831       228 TRQVISVNGGM  238 (239)
T ss_pred             cCCEEEecCCc
Confidence            99999999995

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-33  Score=236.68  Aligned_cols=221  Identities=28%  Similarity=0.354  Sum_probs=186.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++|++|+++|||++++||++++++|+++|++|++++|+.+..++..+++.    ..++.++.+|++++++++++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999998776666555543    24678899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++||||+....  ..++.+.+.++++.++++|+.+++.+++.+++.|.+++.++|+++||...    ..+.+. 
T Consensus        83 ~~~~~d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~----~~~~~~-  155 (276)
T PRK05875         83 WHGRLHGVVHCAGGSET--IGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA----SNTHRW-  155 (276)
T ss_pred             HcCCCCEEEECCCcccC--CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh----cCCCCC-
Confidence            99999999999875432  13556678899999999999999999999999997777789999995543    222222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l  233 (255)
                        ..+|+++|++++++++.++.|+...+||+++|.| +.++|+                      ++  ++|+++++.++
T Consensus       156 --~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  232 (276)
T PRK05875        156 --FGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRP-GLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFL  232 (276)
T ss_pred             --CcchHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHH
Confidence              2679999999999999999999999999999999 666543                      01  68999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...+++|+++.+|||.
T Consensus       233 --~~~~~~~~~g~~~~~~~g~  251 (276)
T PRK05875        233 --LSDAASWITGQVINVDGGH  251 (276)
T ss_pred             --cCchhcCcCCCEEEECCCe
Confidence              8888889999999999996

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-33  Score=233.54  Aligned_cols=219  Identities=28%  Similarity=0.464  Sum_probs=185.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++|||++++||++++++|+++|++|++++|+++..+++.+++..  .++..+.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (250)
T PRK07774          3 RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG   82 (250)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999999999997766666555432  3577889999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+........++.+.+.+++++++++|+.++++++++++|++.+++.++|+++||....          .+.
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----------~~~  152 (250)
T PRK07774         83 GIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAW----------LYS  152 (250)
T ss_pred             CCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEeccccc----------CCc
Confidence            9999999987654322345667789999999999999999999999999987778899999965421          122


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH---------------------h--HHhhhhhhhhhhccC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE---------------------A--IASIANAALYNMAKD  237 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~---------------------~--~~~~~~~~~~l~~~~  237 (255)
                      +.|++||++++++++.+++++...||++++++| +.++++.                     +  ++|++..+.++  ++
T Consensus       153 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~--~~  229 (250)
T PRK07774        153 NFYGLAKVGLNGLTQQLARELGGMNIRVNAIAP-GPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLVGMCLFL--LS  229 (250)
T ss_pred             cccHHHHHHHHHHHHHHHHHhCccCeEEEEEec-CcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hC
Confidence            569999999999999999999999999999999 7666651                     1  78889998888  66


Q ss_pred             CCCCeeeceeEEecCCc
Q 025252          238 DDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~  254 (255)
                      +...+++|+++.+|||.
T Consensus       230 ~~~~~~~g~~~~v~~g~  246 (250)
T PRK07774        230 DEASWITGQIFNVDGGQ  246 (250)
T ss_pred             hhhhCcCCCEEEECCCe
Confidence            66678899999999995

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-33  Score=232.19  Aligned_cols=218  Identities=30%  Similarity=0.415  Sum_probs=181.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++|||++++||+++++.|+++|++|+++.++.+ ...+..+++.  ..++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            568899999999999999999999999999988877543 3334433332  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||||...   ..++.+.+.+++++++++|+.+++.+++.++|.|..  .++|+++||...    ..+.+..  
T Consensus        82 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~----~~~~~~~--  150 (245)
T PRK12937         82 GRIDVLVNNAGVMP---LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ--GGRIINLSTSVI----ALPLPGY--  150 (245)
T ss_pred             CCCCEEEECCCCCC---CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc--CcEEEEEeeccc----cCCCCCC--
Confidence            99999999987653   245667789999999999999999999999999853  478999985432    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh-----HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA-----IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~-----~~~~~~~~~~l~~~  236 (255)
                       ..|+++|++++.+++.++.|+++.||++++++| +.++|+                  ++     +++++..+.++  +
T Consensus       151 -~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l--~  226 (245)
T PRK12937        151 -GPYAASKAAVEGLVHVLANELRGRGITVNAVAP-GPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFL--A  226 (245)
T ss_pred             -chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-CCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--c
Confidence             679999999999999999999999999999999 766554                  11     89999999999  7


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.+++|+++.+|||+.
T Consensus       227 ~~~~~~~~g~~~~~~~g~~  245 (245)
T PRK12937        227 GPDGAWVNGQVLRVNGGFA  245 (245)
T ss_pred             CccccCccccEEEeCCCCC
Confidence            8888999999999999973

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-33  Score=233.28  Aligned_cols=219  Identities=27%  Similarity=0.418  Sum_probs=186.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||+++||++++++|+++|++|++++|+.+...++.+++.  ..++.++.+|+++.++++++++++.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999877666655443  246889999999999999999999998899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||+++...   ..++.+.+.+++++++++|+.+++++.+.++|.|++++.++++++||.++.    .+.+..   .
T Consensus        81 ~d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~----~~~~~~---~  150 (250)
T TIGR03206        81 VDVLVNNAGWDK---FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAAR----VGSSGE---A  150 (250)
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhc----cCCCCC---c
Confidence            999999986543   245566788999999999999999999999999987777899999955332    222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAALYN  233 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~~~l  233 (255)
                      .|+++|++++.+++.++.++.+.||+++.++| +.++++                          ++  ++|+++.+.++
T Consensus       151 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l  229 (250)
T TIGR03206       151 VYAACKGGLVAFSKTMAREHARHGITVNVVCP-GPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFF  229 (250)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEec-CcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHH
Confidence            69999999999999999999999999999999 666443                          11  88999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++...+++|+++.+|||..
T Consensus       230 --~~~~~~~~~g~~~~~~~g~~  249 (250)
T TIGR03206       230 --SSDDASFITGQVLSVSGGLT  249 (250)
T ss_pred             --cCcccCCCcCcEEEeCCCcc
Confidence              88899999999999999963

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.3e-33  Score=232.78  Aligned_cols=214  Identities=25%  Similarity=0.346  Sum_probs=179.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++||||++|||+++++.|+++|++|++++|+ .+.++++.+++..    ..+..+++|++++++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 5555555555431    2345688999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++||||+...   ..++.+.+.+++++++++|+.+++.+++.++|.|.+++.++|+++||..+    ..+.++.   ..|
T Consensus        82 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~----~~~~~~~---~~Y  151 (251)
T PRK07069         82 VLVNNAGVGS---FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAA----FKAEPDY---TAY  151 (251)
T ss_pred             EEEECCCcCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhh----ccCCCCC---chh
Confidence            9999987654   24566778999999999999999999999999998777789999995433    2222222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccC--cEEeEeccCcchhhh-------------------------Hh--HHhhhhhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYG--IRVDCVSHTYGLAMA-------------------------EA--IASIANAALYNM  234 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~g--i~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~~~l~  234 (255)
                      +++|++++.+++.++.|+.+++  |+|++|+| +.++|+                         ++  |+|+++.+.++ 
T Consensus       152 ~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l-  229 (251)
T PRK07069        152 NASKAAVASLTKSIALDCARRGLDVRCNSIHP-TFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYL-  229 (251)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCcEEEEEEee-cccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHH-
Confidence            9999999999999999998765  99999999 666554                         01  88899999998 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...++||+.+.+|||++
T Consensus       230 -~~~~~~~~~g~~i~~~~g~~  249 (251)
T PRK07069        230 -ASDESRFVTGAELVIDGGIC  249 (251)
T ss_pred             -cCccccCccCCEEEECCCee
Confidence             88889999999999999974

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=239.97  Aligned_cols=211  Identities=24%  Similarity=0.340  Sum_probs=179.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|+++||||++|||+++++.|+++|++|++++|+++.++++.++++. ..+..+.+|++|+++++++++++.+.++
T Consensus         5 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   84 (296)
T PRK05872          5 TSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG   84 (296)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            357899999999999999999999999999999999998888887777653 3566778999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|.++ .|+|+++||..+    ..+.+..   
T Consensus        85 ~id~vI~nAG~~~---~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~----~~~~~~~---  153 (296)
T PRK05872         85 GIDVVVANAGIAS---GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER-RGYVLQVSSLAA----FAAAPGM---  153 (296)
T ss_pred             CCCEEEECCCcCC---CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCEEEEEeCHhh----cCCCCCc---
Confidence            9999999988654   3567788999999999999999999999999998654 589999995432    2223333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------H---h--HHhhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~---~--~~~~~~~~~~l~  234 (255)
                      ..|++||++++++++.++.|++++||+|++++| +.++|+                     +   +  ++++++.+.++ 
T Consensus       154 ~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~P-g~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~-  231 (296)
T PRK05872        154 AAYCASKAGVEAFANALRLEVAHHGVTVGSAYL-SWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDG-  231 (296)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEec-CcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHH-
Confidence            679999999999999999999999999999999 776654                     0   1  88999999988 


Q ss_pred             ccCCCCCeeece
Q 025252          235 AKDDDTSYVGKQ  246 (255)
Q Consensus       235 ~~~~~~~~~~G~  246 (255)
                       +++...+++|.
T Consensus       232 -~~~~~~~i~~~  242 (296)
T PRK05872        232 -IERRARRVYAP  242 (296)
T ss_pred             -HhcCCCEEEch
Confidence             77778888775

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=233.87  Aligned_cols=220  Identities=27%  Similarity=0.391  Sum_probs=185.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++|||++++||++++++|+++|++|++++|+++...+..+++..  .++.++++|+++.++++++++++.+.++
T Consensus         4 ~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   83 (262)
T PRK13394          4 NLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG   83 (262)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            36789999999999999999999999999999999998777766665532  3577899999999999999999988889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh-cCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM-VPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||||+....   .+..+.+.++++.++++|+.+++.+++.+++.+ ++.+.++|+++||...    ..+.+.   
T Consensus        84 ~~d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~----~~~~~~---  153 (262)
T PRK13394         84 SVDILVSNAGIQIV---NPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHS----HEASPL---  153 (262)
T ss_pred             CCCEEEECCccCCC---CchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhh----cCCCCC---
Confidence            99999999876532   345567889999999999999999999999999 6667789999996432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IAS  225 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~  225 (255)
                      ...|+++|++++++++.++.++.+.+|+++++.| +.+.++                                ++  ++|
T Consensus       154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  232 (262)
T PRK13394        154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCP-GFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVED  232 (262)
T ss_pred             CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHH
Confidence            2569999999999999999999999999999999 655543                                01  789


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++++.++  +++....++|+.+.+|||++
T Consensus       233 va~a~~~l--~~~~~~~~~g~~~~~~~g~~  260 (262)
T PRK13394        233 VAQTVLFL--SSFPSAALTGQSFVVSHGWF  260 (262)
T ss_pred             HHHHHHHH--cCccccCCcCCEEeeCCcee
Confidence            99999988  77777889999999999974

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-33  Score=233.16  Aligned_cols=219  Identities=31%  Similarity=0.427  Sum_probs=187.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++|||++++||++++++|+++|++|++++|+++..++...++.  ..++..+.+|++++++++++++++.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999887766665553  246888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||||+....   ..+.+.+.++++.++++|+.+++.+++.++|.|++++.++|+++||...    ..+..+.   .
T Consensus        82 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~----~~~~~~~---~  151 (258)
T PRK12429         82 VDILVNNAGIQHV---APIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHG----LVGSAGK---A  151 (258)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhh----ccCCCCc---c
Confidence            9999999875542   4556778899999999999999999999999998888899999995432    2233333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IASIA  227 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~~~  227 (255)
                      .|+++|++++++++.++.|+++.||+|+++.| +.+.++                                ++  ++|++
T Consensus       152 ~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a  230 (258)
T PRK12429        152 AYVSAKHGLIGLTKVVALEGATHGVTVNAICP-GYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIA  230 (258)
T ss_pred             hhHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHH
Confidence            79999999999999999999999999999999 665542                                11  88999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.+.++  +++....++|+++.+|||++
T Consensus       231 ~~~~~l--~~~~~~~~~g~~~~~~~g~~  256 (258)
T PRK12429        231 DYALFL--ASFAAKGVTGQAWVVDGGWT  256 (258)
T ss_pred             HHHHHH--cCccccCccCCeEEeCCCEe
Confidence            999888  77777789999999999985

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-33  Score=230.60  Aligned_cols=216  Identities=16%  Similarity=0.231  Sum_probs=181.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCC--HHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSN--EREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~--~~~~~~~~~~~~~   97 (255)
                      .|++|+++|||+++|||++++++|+++|++|++++|+++..++..+++.   ...+.++.+|+++  .++++++++++.+
T Consensus         3 ~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~   82 (239)
T PRK08703          3 TLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAE   82 (239)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHH
Confidence            3678999999999999999999999999999999999887777666542   2356788899986  5688999999988


Q ss_pred             Hc-CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KF-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~-g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+ +.+|++||||+...  ...++.+.+.+++++++++|+.+++++++.++|.|.+.+.++++++||..    +..+.+.
T Consensus        83 ~~~~~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~----~~~~~~~  156 (239)
T PRK08703         83 ATQGKLDGIVHCAGYFY--ALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESH----GETPKAY  156 (239)
T ss_pred             HhCCCCCEEEEeccccc--cCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccc----cccCCCC
Confidence            87 88999999987543  12466788999999999999999999999999999877788999998543    2222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhccc-CcEEeEeccCcchhhhHh--------------HHhhhhhhhhhhccCCCCC
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRY-GIRVDCVSHTYGLAMAEA--------------IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~p~~~~~t~~~--------------~~~~~~~~~~l~~~~~~~~  241 (255)
                      .   ..|++||++++.+++.++.|+.++ +|||++|.| |.++|+..              +++++..+.|+  +++++.
T Consensus       157 ~---~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~p-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  230 (239)
T PRK08703        157 W---GGFGASKAALNYLCKVAADEWERFGNLRANVLVP-GPINSPQRIKSHPGEAKSERKSYGDVLPAFVWW--ASAESK  230 (239)
T ss_pred             c---cchHHhHHHHHHHHHHHHHHhccCCCeEEEEEec-CcccCccccccCCCCCccccCCHHHHHHHHHHH--hCcccc
Confidence            2   569999999999999999999887 699999999 87877621              67899999999  899999


Q ss_pred             eeeceeEEe
Q 025252          242 YVGKQNLLV  250 (255)
Q Consensus       242 ~~~G~~i~~  250 (255)
                      ++||++|.|
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999864

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-33  Score=218.03  Aligned_cols=188  Identities=18%  Similarity=0.224  Sum_probs=166.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |.+.|.+++||||++|||+++|++|.+.|.+|++++|+++.+++..++.+  .++...||+.|.++++++++.+++.|..
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p--~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENP--EIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCc--chheeeecccchhhHHHHHHHHHhhCCc
Confidence            45789999999999999999999999999999999999999999988764  6888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ++++|||||....-.+. -.+.+.+..++-+.+|+.+++++++.++|++.+++.+.||++|    |+.+..+....   .
T Consensus        79 lNvliNNAGIqr~~dlt-~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVS----SGLafvPm~~~---P  150 (245)
T COG3967          79 LNVLINNAGIQRNEDLT-GAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVS----SGLAFVPMAST---P  150 (245)
T ss_pred             hheeeecccccchhhcc-CCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEec----cccccCccccc---c
Confidence            99999999877544433 3455777889999999999999999999999999999999999    55544443333   4


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      .|+++|||+..|+.+|+.+++..+|+|--+.| ..++|+
T Consensus       151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~P-P~V~t~  188 (245)
T COG3967         151 VYCATKAAIHSYTLALREQLKDTSVEVIELAP-PLVDTT  188 (245)
T ss_pred             cchhhHHHHHHHHHHHHHHhhhcceEEEEecC-CceecC
Confidence            59999999999999999999999999999999 888875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-33  Score=229.29  Aligned_cols=217  Identities=30%  Similarity=0.407  Sum_probs=178.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .|+++||||++|||.++++.|+++|++|+++. |+++..++..+++.  ..++.+++||++++++++++++++.+.++++
T Consensus         2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06947          2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL   81 (248)
T ss_pred             CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            46899999999999999999999999998764 55555555544442  2468899999999999999999998888999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCcCCCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++||||+....  ..++.+.+.++++.++++|+.+++++++.+++.+..++   .++||++||..+.    .+.+.  +
T Consensus        82 d~li~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~----~~~~~--~  153 (248)
T PRK06947         82 DALVNNAGIVAP--SMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR----LGSPN--E  153 (248)
T ss_pred             CEEEECCccCCC--CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc----CCCCC--C
Confidence            999999876532  13456778999999999999999999999999886543   4679999954322    11111  1


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH---------------------h--HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE---------------------A--IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~---------------------~--~~~~~~~~~~l~~~  236 (255)
                      ...|++||++++++++.++.++.++||+|+++.| +.++|+.                     +  +++++..++++  +
T Consensus       154 ~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l--~  230 (248)
T PRK06947        154 YVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRP-GLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVAETIVWL--L  230 (248)
T ss_pred             CcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEec-cCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHHHHHHHH--c
Confidence            1469999999999999999999999999999999 7776540                     1  69999999999  8


Q ss_pred             CCCCCeeeceeEEecCC
Q 025252          237 DDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG  253 (255)
                      ++...+++|+++.+|||
T Consensus       231 ~~~~~~~~G~~~~~~gg  247 (248)
T PRK06947        231 SDAASYVTGALLDVGGG  247 (248)
T ss_pred             CccccCcCCceEeeCCC
Confidence            88889999999999998

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=5.1e-33  Score=231.76  Aligned_cols=211  Identities=16%  Similarity=0.132  Sum_probs=170.8

Q ss_pred             EEEEecCCChHHHHHHHHHHH----cCCEEEEEecCcchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHK----NGAKVVIADVQDNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|||+++|||++++++|++    .|++|++++|+++..+++.+++..    .++.++.+|++++++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            589999999999999999997    799999999998877777666532    367889999999999999999998876


Q ss_pred             CCc----cEEEEcCCCccccCccCCCC-CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCcccccc
Q 025252          100 GKL----DILVNSGCNLEYRGFVSILD-TPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEI  172 (255)
Q Consensus       100 g~i----d~li~~a~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~~  172 (255)
                      +.+    |++|||||...... ....+ .+.++|++++++|+.+++++++.++|.|++++  .++|+++||..+    ..
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~----~~  156 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVS-KGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA----IQ  156 (256)
T ss_pred             ccCCCceEEEEeCCcccCccc-cccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh----CC
Confidence            643    68999987543211 11222 35789999999999999999999999997653  478999995432    22


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IAS  225 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~  225 (255)
                      +.+..   ..|++||+|+++|++.|+.|++++||+||+|+| |.++|+                         ++  |+|
T Consensus       157 ~~~~~---~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e  232 (256)
T TIGR01500       157 PFKGW---ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAP-GVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKV  232 (256)
T ss_pred             CCCCc---hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC-CcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHH
Confidence            22223   669999999999999999999999999999999 777654                         12  889


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEe
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLV  250 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~  250 (255)
                      ++..++++  ++ ...++||+++..
T Consensus       233 va~~~~~l--~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       233 SAQKLLSL--LE-KDKFKSGAHVDY  254 (256)
T ss_pred             HHHHHHHH--Hh-cCCcCCcceeec
Confidence            99999999  64 467999998864

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-32  Score=229.08  Aligned_cols=216  Identities=27%  Similarity=0.405  Sum_probs=185.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||+++||++++++|+++|++|++++|+.+..+++.+++...++.++++|++|++++.++++++.++++++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            57899999999999999999999999999999998877777766655578899999999999999999999989999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      ||+++....   .++.+.+.+++++.+++|+.+++.+++++++.+.+++.++|+++||.....     ..+.   ..|++
T Consensus        82 i~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~-----~~~~---~~y~~  150 (257)
T PRK07074         82 VANAGAARA---ASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMA-----ALGH---PAYSA  150 (257)
T ss_pred             EECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcC-----CCCC---cccHH
Confidence            999876442   345677889999999999999999999999999877788999999643211     1111   45999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------h--HHhhhhhhhhhhccCCCC
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------~--~~~~~~~~~~l~~~~~~~  240 (255)
                      +|++++++++.++.|+.++||+|++++| +.++++.                       +  ++|+++++.++  +++..
T Consensus       151 sK~a~~~~~~~~a~~~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l--~~~~~  227 (257)
T PRK07074        151 AKAGLIHYTKLLAVEYGRFGIRANAVAP-GTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFL--ASPAA  227 (257)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEEe-CcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--cCchh
Confidence            9999999999999999999999999999 6665540                       1  78999999999  78888


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .+++|+.+.+|||..
T Consensus       228 ~~~~g~~~~~~~g~~  242 (257)
T PRK07074        228 RAITGVCLPVDGGLT  242 (257)
T ss_pred             cCcCCcEEEeCCCcC
Confidence            899999999999963

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-33  Score=242.62  Aligned_cols=219  Identities=24%  Similarity=0.297  Sum_probs=180.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         5 ~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g   84 (334)
T PRK07109          5 PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG   84 (334)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC
Confidence            4678999999999999999999999999999999999887777666553  24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+...   ..++.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..+.    .+.+..   
T Consensus        85 ~iD~lInnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~----~~~~~~---  154 (334)
T PRK07109         85 PIDTWVNNAMVTV---FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAY----RSIPLQ---  154 (334)
T ss_pred             CCCEEEECCCcCC---CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhc----cCCCcc---
Confidence            9999999987543   356678899999999999999999999999999988778999999965433    222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcc--cCcEEeEeccCcchhhh-----------------Hh--HHhhhhhhhhhhccCCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGR--YGIRVDCVSHTYGLAMA-----------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~--~gi~v~~v~p~~~~~t~-----------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      ..|++||+++++|+++++.|+..  .+|+|++|+| +.++|+                 ++  |+++++++++++...+.
T Consensus       155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~P-g~v~T~~~~~~~~~~~~~~~~~~~~~~pe~vA~~i~~~~~~~~~  233 (334)
T PRK07109        155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQP-PAVNTPQFDWARSRLPVEPQPVPPIYQPEVVADAILYAAEHPRR  233 (334)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeC-CCccCchhhhhhhhccccccCCCCCCCHHHHHHHHHHHHhCCCc
Confidence            66999999999999999999975  4699999999 777665                 12  89999999999432233


Q ss_pred             CCeeeceeEEecC
Q 025252          240 TSYVGKQNLLVNG  252 (255)
Q Consensus       240 ~~~~~G~~i~~dg  252 (255)
                      ..++.+....++.
T Consensus       234 ~~~vg~~~~~~~~  246 (334)
T PRK07109        234 ELWVGGPAKAAIL  246 (334)
T ss_pred             EEEeCcHHHHHHH
Confidence            4455555554443

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-32  Score=227.42  Aligned_cols=217  Identities=28%  Similarity=0.407  Sum_probs=177.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+++|||++++||.+++++|+++|++|++..+ +++..++..+++.  ..++.++.+|++|.++++++++++.+.++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            578999999999999999999999999988764 4444444444442  2467889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCcCCCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++||||+.....  ..+.+.+.++|++++++|+.+++.+++.+++.|.++.   +|+|+++||....    .+.+..  
T Consensus        82 d~li~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~----~~~~~~--  153 (248)
T PRK06123         82 DALVNNAGILEAQ--MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR----LGSPGE--  153 (248)
T ss_pred             CEEEECCCCCCCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc----CCCCCC--
Confidence            9999998765321  3456778999999999999999999999999986542   5789999954322    222111  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh-----HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA-----IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~-----~~~~~~~~~~l~~~  236 (255)
                      ...|++||++++++++.++.|+.++||+|++|+| +.+.++                  ++     ++|+++++.++  +
T Consensus       154 ~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~p-g~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l--~  230 (248)
T PRK06123        154 YIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRP-GVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWL--L  230 (248)
T ss_pred             ccchHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence            1359999999999999999999999999999999 666554                  11     78999999999  8


Q ss_pred             CCCCCeeeceeEEecCC
Q 025252          237 DDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG  253 (255)
                      ++...+++|+.+.+|||
T Consensus       231 ~~~~~~~~g~~~~~~gg  247 (248)
T PRK06123        231 SDEASYTTGTFIDVSGG  247 (248)
T ss_pred             CccccCccCCEEeecCC
Confidence            88888999999999998

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.6e-32  Score=227.29  Aligned_cols=217  Identities=31%  Similarity=0.465  Sum_probs=180.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++|||++++||++++++|+++|++|++..+ +++..++..+++..  .++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (247)
T PRK12935          4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG   83 (247)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999987654 34445555444432  3688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....   ..+.+.+.+++++++++|+.+++.+++.++|.|.+++.++++++||..+.    .+..+   .
T Consensus        84 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~~---~  153 (247)
T PRK12935         84 KVDILVNNAGITRD---RTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ----AGGFG---Q  153 (247)
T ss_pred             CCCEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc----CCCCC---C
Confidence            99999999876532   34567788999999999999999999999999987777899999965322    22222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|++||++++++++.++.|+.+.||+++++.| +.++++                    ++  ++|+++.+.++  +++
T Consensus       154 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~~--~~~  230 (247)
T PRK12935        154 TNYSAAKAGMLGFTKSLALELAKTNVTVNAICP-GFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGVVYL--CRD  230 (247)
T ss_pred             cchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEe-CCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHHHHH--cCc
Confidence            679999999999999999999999999999999 666654                    11  99999999998  654


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                       ..+++|+.+.+|||.
T Consensus       231 -~~~~~g~~~~i~~g~  245 (247)
T PRK12935        231 -GAYITGQQLNINGGL  245 (247)
T ss_pred             -ccCccCCEEEeCCCc
Confidence             458999999999996

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.1e-32  Score=226.12  Aligned_cols=216  Identities=22%  Similarity=0.358  Sum_probs=180.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .|+++|||++++||++++++|+++|++|++++|+.. ..++......  ..++.++.+|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999854 2222222222  2468899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||++...   ..++.+.+.+++++++++|+.+++++++.++|.+++++.++|+++||....    .+.++.   ..
T Consensus        82 d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~----~~~~~~---~~  151 (245)
T PRK12824         82 DILVNNAGITR---DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGL----KGQFGQ---TN  151 (245)
T ss_pred             CEEEECCCCCC---CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhc----cCCCCC---hH
Confidence            99999977543   245567889999999999999999999999999987778899999955332    222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |++||++++++++.++.|+++.||+++.+.| +.+.++                 +   +  +++++..+.++  +++..
T Consensus       152 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~~~  228 (245)
T PRK12824        152 YSAAKAGMIGFTKALASEGARYGITVNCIAP-GYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFL--VSEAA  228 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCeEEEEEEE-cccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--cCccc
Confidence            9999999999999999999999999999999 666543                 1   1  78999999999  77778


Q ss_pred             CeeeceeEEecCCc
Q 025252          241 SYVGKQNLLVNGGF  254 (255)
Q Consensus       241 ~~~~G~~i~~dgG~  254 (255)
                      .+++|+.+.+|||.
T Consensus       229 ~~~~G~~~~~~~g~  242 (245)
T PRK12824        229 GFITGETISINGGL  242 (245)
T ss_pred             cCccCcEEEECCCe
Confidence            89999999999995

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.1e-32  Score=257.01  Aligned_cols=221  Identities=29%  Similarity=0.389  Sum_probs=185.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.    ..++..+++|++|+++++++++++.+
T Consensus       410 ~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~  489 (676)
T TIGR02632       410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVAL  489 (676)
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877666555542    23577899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+|++|++|||||...   ..++.+.+.++|+..+++|+.+++.+++.+++.|++++ .++|+++||..+    ..+.++
T Consensus       490 ~~g~iDilV~nAG~~~---~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a----~~~~~~  562 (676)
T TIGR02632       490 AYGGVDIVVNNAGIAT---SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNA----VYAGKN  562 (676)
T ss_pred             hcCCCcEEEECCCCCC---CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhh----cCCCCC
Confidence            9999999999987543   24566778999999999999999999999999997664 578999995432    223333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh--------------------hh-------------Hh-
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA--------------------MA-------------EA-  222 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~--------------------t~-------------~~-  222 (255)
                      .   ..|++||++++++++.++.|+.++|||||+|+||....                    ..             ++ 
T Consensus       563 ~---~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v  639 (676)
T TIGR02632       563 A---SAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHI  639 (676)
T ss_pred             C---HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCc
Confidence            3   67999999999999999999999999999999943321                    00             11 


Q ss_pred             -HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 -IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 -~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                       |+|+++++.++  +++...++||+++.+|||+
T Consensus       640 ~peDVA~av~~L--~s~~~~~~TG~~i~vDGG~  670 (676)
T TIGR02632       640 FPADIAEAVFFL--ASSKSEKTTGCIITVDGGV  670 (676)
T ss_pred             CHHHHHHHHHHH--hCCcccCCcCcEEEECCCc
Confidence             89999999999  8888889999999999996

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=1.1e-32  Score=235.72  Aligned_cols=219  Identities=18%  Similarity=0.130  Sum_probs=177.7

Q ss_pred             EEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           30 IITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        30 lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +||||++|||++++++|+++| ++|++++|+.+...++.++++.  .++.++.+|++|.++++++++++.+.++++|++|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999998877777766642  4678889999999999999999998888999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCccc---cccc--------
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTAC---TEIE--------  173 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~---~~~~--------  173 (255)
                      ||||....  ..+..+.+.++|++++++|+.+++.+++.++|.|++++  .|+||++||..+...   ...+        
T Consensus        81 nnAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         81 CNAAVYLP--TAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             ECCCcCCC--CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            99876431  12445678999999999999999999999999997765  689999997654211   0000        


Q ss_pred             -----------------CcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcch-hhhH-------------
Q 025252          174 -----------------GLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGL-AMAE-------------  221 (255)
Q Consensus       174 -----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~-~t~~-------------  221 (255)
                                       .....+...|++||+|...+++.+++++.+ .||+|++++| |.+ .|+.             
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P-G~v~~t~~~~~~~~~~~~~~~  237 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYP-GCIATTGLFREHIPLFRLLFP  237 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecC-CcccCccccccccHHHHHHHH
Confidence                             001123357999999999999999999975 6999999999 666 4420             


Q ss_pred             ---------h--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          222 ---------A--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       222 ---------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                               +  |++.+..++++  .++...+.+|+++.+||+
T Consensus       238 ~~~~~~~~~~~~pe~~a~~~~~l--~~~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        238 PFQKYITKGYVSEEEAGKRLAQV--VSDPSLTKSGVYWSWNGG  278 (308)
T ss_pred             HHHHHHhcccccHHHhhhhhhhh--ccccccCCCccccccCCc
Confidence                     1  68999999998  777777899999998886

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.4e-32  Score=226.45  Aligned_cols=218  Identities=25%  Similarity=0.327  Sum_probs=179.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+++|||++++||++++++|+++|++|++++|+.. ..++..+.++  ..++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            578999999999999999999999999999998643 3344444332  2468899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC------CCcEEEeccCCCcccccccCcC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR------RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      |++|||||..... ..++.+.+.++++.++++|+.+++++++.+.+.|.++.      .++|+++||..+    ..+..+
T Consensus        82 d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~  156 (256)
T PRK12745         82 DCLVNNAGVGVKV-RGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNA----IMVSPN  156 (256)
T ss_pred             CEEEECCccCCCC-CCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhh----ccCCCC
Confidence            9999998764322 24566788999999999999999999999999997654      356999995432    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l  233 (255)
                         ...|++||++++.+++.++.|+.++||+|++++| +.++++                  +   +  ++|+++++.++
T Consensus       157 ---~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l  232 (256)
T PRK12745        157 ---RGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRP-GLIKTDMTAPVTAKYDALIAKGLVPMPRWGEPEDVARAVAAL  232 (256)
T ss_pred             ---CcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEec-CCCcCccccccchhHHhhhhhcCCCcCCCcCHHHHHHHHHHH
Confidence               2679999999999999999999999999999999 767654                  0   1  78899999988


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...+++|+++.+|||.
T Consensus       233 --~~~~~~~~~G~~~~i~gg~  251 (256)
T PRK12745        233 --ASGDLPYSTGQAIHVDGGL  251 (256)
T ss_pred             --hCCcccccCCCEEEECCCe
Confidence              7778889999999999996

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-32  Score=225.98  Aligned_cols=220  Identities=36%  Similarity=0.559  Sum_probs=186.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||+++||++++++|+++|++|+++ +|+++...+..+.+.  ..++.++.+|++++++++++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999999998 888777666655543  2468889999999999999999998888


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||+++...   ..++.+.+.+++++++++|+.+++.+.+.+.|.+.+++.++++++||....    .+.+..  
T Consensus        82 ~~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~----~~~~~~--  152 (247)
T PRK05565         82 GKIDILVNNAGISN---FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL----IGASCE--  152 (247)
T ss_pred             CCCCEEEECCCcCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc----cCCCCc--
Confidence            99999999987653   245567789999999999999999999999999987778899999954322    222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~  237 (255)
                       ..|+.+|++++.+++.++.++++.|+++++++| +.++++                    ++  +++++..+.++  ++
T Consensus       153 -~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~  228 (247)
T PRK05565        153 -VLYSASKGAVNAFTKALAKELAPSGIRVNAVAP-GAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVVLFL--AS  228 (247)
T ss_pred             -cHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEE-CCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--cC
Confidence             569999999999999999999999999999999 676553                    11  78999999999  88


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +....++|+++.+|+|++
T Consensus       229 ~~~~~~~g~~~~~~~~~~  246 (247)
T PRK05565        229 DDASYITGQIITVDGGWT  246 (247)
T ss_pred             CccCCccCcEEEecCCcc
Confidence            888999999999999975

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-32  Score=228.84  Aligned_cols=199  Identities=31%  Similarity=0.406  Sum_probs=172.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ++.++.+|++|+++++++++++.+.++++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGPI   79 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999999999999999999999999999999999888777766654  57789999999999999999999989999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....   .++.+.+.+++++++++|+.+++.+++.++|.|.+++.++|+++||..+.    .+.++.   ..
T Consensus        80 d~li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~~~~~---~~  149 (273)
T PRK07825         80 DVLVNNAGVMPV---GPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGK----IPVPGM---AT  149 (273)
T ss_pred             CEEEECCCcCCC---CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCcccc----CCCCCC---cc
Confidence            999999876542   45667789999999999999999999999999988888999999965432    233333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------~--~~~~~~~~~~l~  234 (255)
                      |++||++++++++.++.|+.+.||+|++|+| +.+.|+.           +  +++++..+..++
T Consensus       150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~va~~~~~~l  213 (273)
T PRK07825        150 YCASKHAVVGFTDAARLELRGTGVHVSVVLP-SFVNTELIAGTGGAKGFKNVEPEDVAAAIVGTV  213 (273)
T ss_pred             hHHHHHHHHHHHHHHHHHhhccCcEEEEEeC-CcCcchhhcccccccCCCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999999 7777651           1  899999888883

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=3.4e-32  Score=224.39  Aligned_cols=215  Identities=24%  Similarity=0.340  Sum_probs=179.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++|||++++||++++++|+++|++|+++.| +++..++..++..  ..++.++.+|++++++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999999888 4444444443332  24688999999999999999999999889999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||++....   ..+.+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||..+    ..+..+.   ..|
T Consensus        81 ~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~----~~~~~~~---~~y  150 (242)
T TIGR01829        81 VLVNNAGITRD---ATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNG----QKGQFGQ---TNY  150 (242)
T ss_pred             EEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh----cCCCCCc---chh
Confidence            99999875432   3456778999999999999999999999999998777789999995432    2222222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCCCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      +++|++++.+++.+++|+.+.||+++++.| +.++++                    ++  |+++++.+.++  ++++..
T Consensus       151 ~~sk~a~~~~~~~la~~~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l--~~~~~~  227 (242)
T TIGR01829       151 SAAKAGMIGFTKALAQEGATKGVTVNTISP-GYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFL--ASEEAG  227 (242)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEee-CCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCchhc
Confidence            999999999999999999999999999999 665543                    11  88999999999  888888


Q ss_pred             eeeceeEEecCCc
Q 025252          242 YVGKQNLLVNGGF  254 (255)
Q Consensus       242 ~~~G~~i~~dgG~  254 (255)
                      +++|+++.+|||+
T Consensus       228 ~~~G~~~~~~gg~  240 (242)
T TIGR01829       228 YITGATLSINGGL  240 (242)
T ss_pred             CccCCEEEecCCc
Confidence            9999999999996

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.1e-32  Score=225.26  Aligned_cols=220  Identities=25%  Similarity=0.418  Sum_probs=180.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++++++|||+++|||+++++.|+++|++|++++|+++..++..+++.  ..++.++++|+++.++++++++++.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999999877666665543  24678899999999999999999988888


Q ss_pred             CccEEEEcCCCccccCc-----cCC-CCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCccccccc
Q 025252          101 KLDILVNSGCNLEYRGF-----VSI-LDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~-----~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~  173 (255)
                      ++|++|||+|.......     ..+ .+.+.++++.++++|+.+++++.+.++|.|.++ ..++|+++||.+..     +
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~-----~  156 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARA-----G  156 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccccc-----C
Confidence            99999999875331110     111 566889999999999999999999999998655 45788888854321     1


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAAL  231 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~  231 (255)
                      .+   +...|++||+++++++++++.|+.++||++++++| +.+.++                 +   +  ++|++..+.
T Consensus       157 ~~---~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~  232 (253)
T PRK08217        157 NM---GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAP-GVIETEMTAAMKPEALERLEKMIPVGRLGEPEEIAHTVR  232 (253)
T ss_pred             CC---CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee-CCCcCccccccCHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence            22   23679999999999999999999999999999999 666543                 0   1  799999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++  ++  ..+++|+++.+|||++
T Consensus       233 ~l--~~--~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        233 FI--IE--NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             HH--Hc--CCCcCCcEEEeCCCcc
Confidence            99  54  3588999999999985

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-32  Score=231.02  Aligned_cols=186  Identities=27%  Similarity=0.431  Sum_probs=160.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++.+++..+++..  .++.++.+|++|+++++++++++.+.+|+
T Consensus         4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (275)
T PRK05876          4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH   83 (275)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999998877776666542  35788999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|.+++ +|+|+++||..+    ..+.++.   
T Consensus        84 id~li~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~----~~~~~~~---  153 (275)
T PRK05876         84 VDVVFSNAGIVV---GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAG----LVPNAGL---  153 (275)
T ss_pred             CCEEEECCCcCC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhh----ccCCCCC---
Confidence            999999987643   24667889999999999999999999999999997665 689999995432    2233322   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ..|++||++++++++.++.|++++||+|++|+| +.++|+
T Consensus       154 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~  192 (275)
T PRK05876        154 GAYGVAKYGVVGLAETLAREVTADGIGVSVLCP-MVVETN  192 (275)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEe-Cccccc
Confidence            679999999999999999999999999999999 777664

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3.4e-32  Score=223.82  Aligned_cols=211  Identities=20%  Similarity=0.140  Sum_probs=168.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||++|||++++++|+++|  ..|++..|+....      ....++.++++|++++++++++.    +.++++|+
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id~   70 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD------FQHDNVQWHALDVTDEAEIKQLS----EQFTQLDW   70 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc------cccCceEEEEecCCCHHHHHHHH----HhcCCCCE
Confidence            479999999999999999999985  5666666654321      12347888999999999987754    44589999


Q ss_pred             EEEcCCCcccc---CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          105 LVNSGCNLEYR---GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       105 li~~a~~~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|||||.....   ....+.+.+.+++++.+++|+.+++.+++.++|.|++++.++++++||..+.... .+.   .+..
T Consensus        71 li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~-~~~---~~~~  146 (235)
T PRK09009         71 LINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD-NRL---GGWY  146 (235)
T ss_pred             EEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc-CCC---CCcc
Confidence            99998766432   1235667788999999999999999999999999987777889998854322111 111   1225


Q ss_pred             ccccchHHHHHHHHHHHHHhcc--cCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhhccCCCCCeeec
Q 025252          182 YYGVSKFGILGLVKSLAAELGR--YGIRVDCVSHTYGLAMAE------------A--IASIANAALYNMAKDDDTSYVGK  245 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~--~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~~~~~~~~~~~G  245 (255)
                      .|+++|+++++|++.|+.|+++  .+|+|++|+| |.++|+.            +  |++++..++++  +++...+++|
T Consensus       147 ~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~a~~~~~l--~~~~~~~~~g  223 (235)
T PRK09009        147 SYRASKAALNMFLKTLSIEWQRSLKHGVVLALHP-GTTDTALSKPFQQNVPKGKLFTPEYVAQCLLGI--IANATPAQSG  223 (235)
T ss_pred             hhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcc-cceecCCCcchhhccccCCCCCHHHHHHHHHHH--HHcCChhhCC
Confidence            6999999999999999999987  6899999999 7777751            1  89999999999  7788889999


Q ss_pred             eeEEecCCc
Q 025252          246 QNLLVNGGF  254 (255)
Q Consensus       246 ~~i~~dgG~  254 (255)
                      +++.+||||
T Consensus       224 ~~~~~~g~~  232 (235)
T PRK09009        224 SFLAYDGET  232 (235)
T ss_pred             cEEeeCCcC
Confidence            999999998

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.8e-32  Score=228.51  Aligned_cols=182  Identities=28%  Similarity=0.410  Sum_probs=156.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |++|+++|||+++|||++++++|+++|++|++++|+++.++++..    .++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          1 MQKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            357899999999999999999999999999999999876655443    3578899999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||||...   ..++.+.+.+++++++++|+.+++.+++.++|.|++++.|+|+++||.++    ..+.+..   ..|
T Consensus        77 ~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~----~~~~~~~---~~Y  146 (273)
T PRK06182         77 VLVNNAGYGS---YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGG----KIYTPLG---AWY  146 (273)
T ss_pred             EEEECCCcCC---CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhh----cCCCCCc---cHh
Confidence            9999987653   35667889999999999999999999999999998887899999996432    2222222   459


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ++||++++++++.++.|++++||+|++|+| +.++|+
T Consensus       147 ~~sKaa~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~  182 (273)
T PRK06182        147 HATKFALEGFSDALRLEVAPFGIDVVVIEP-GGIKTE  182 (273)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCCEEEEEec-CCcccc
Confidence            999999999999999999999999999999 766654

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=2.5e-32  Score=234.25  Aligned_cols=222  Identities=17%  Similarity=0.155  Sum_probs=175.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ...++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.  ++.++.+|++|.++++++++++.+.+
T Consensus        20 ~~~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         20 AGHDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID--GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             cCCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh--hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            3456789999999999999999999999999999999999887776666553  47889999999999999999999888


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-c----C
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-E----G  174 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-~----~  174 (255)
                      +++|++|||||....     ....+.++|+..+++|+.+++.+++.++|.|++++.++||++||.+....... .    .
T Consensus        98 ~~iD~li~nAg~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~  172 (315)
T PRK06196         98 RRIDILINNAGVMAC-----PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFT  172 (315)
T ss_pred             CCCCEEEECCCCCCC-----CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCcc
Confidence            999999999876431     12456788999999999999999999999998777789999997543211100 0    0


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IASIA  227 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~~~  227 (255)
                      .+..+...|++||++++.+++.++.+++++||+|++|+| |.+.|+                         ++  |++.+
T Consensus       173 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  251 (315)
T PRK06196        173 RGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHP-GGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGA  251 (315)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeC-CcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHH
Confidence            112233579999999999999999999999999999999 666553                         12  78999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEec
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVN  251 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~d  251 (255)
                      ..++++  ++......+|..+..|
T Consensus       252 ~~~~~l--~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        252 ATQVWA--ATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHHHH--hcCCccCCCCCeEeCC
Confidence            999999  5443333344444434

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-32  Score=224.58  Aligned_cols=215  Identities=26%  Similarity=0.300  Sum_probs=174.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ..+|+++||||++|||++++++|+++|++|+++.++ .+...++.+++.  ..++.++.+|++|.++++++++++.+.++
T Consensus         7 ~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   86 (258)
T PRK09134          7 AAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG   86 (258)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            368899999999999999999999999999887664 344444444432  24688899999999999999999998889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....   .++.+.+.+++++++++|+.+++++++.+.+.+.++..++|+++++...    ..+.+..   
T Consensus        87 ~iD~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~----~~~~p~~---  156 (258)
T PRK09134         87 PITLLVNNASLFEY---DSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV----WNLNPDF---  156 (258)
T ss_pred             CCCEEEECCcCCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh----cCCCCCc---
Confidence            99999999875532   4566789999999999999999999999999997777789999884321    1122222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------H---h--HHhhhhhhhhhhccCCCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------E---A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~---~--~~~~~~~~~~l~~~~~~~  240 (255)
                      ..|++||++++++++.+++|+.+. |+|++++| |.+.+.               +   .  ++|++.++.++  ++  .
T Consensus       157 ~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~i~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~--~~--~  230 (258)
T PRK09134        157 LSYTLSKAALWTATRTLAQALAPR-IRVNAIGP-GPTLPSGRQSPEDFARQHAATPLGRGSTPEEIAAAVRYL--LD--A  230 (258)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCC-cEEEEeec-ccccCCcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hc--C
Confidence            469999999999999999999876 99999999 655431               0   1  88999999998  54  3


Q ss_pred             CeeeceeEEecCCc
Q 025252          241 SYVGKQNLLVNGGF  254 (255)
Q Consensus       241 ~~~~G~~i~~dgG~  254 (255)
                      .+++|+.+.+|||.
T Consensus       231 ~~~~g~~~~i~gg~  244 (258)
T PRK09134        231 PSVTGQMIAVDGGQ  244 (258)
T ss_pred             CCcCCCEEEECCCe
Confidence            46899999999995

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-32  Score=222.80  Aligned_cols=215  Identities=28%  Similarity=0.391  Sum_probs=178.3

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++++|+++|||++++||+++++.|+++|++|++++|+.+..+++.+..   ...++.+|+++.++++++++.    .+
T Consensus         4 ~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~----~~   76 (245)
T PRK07060          4 AFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET---GCEPLRLDVGDDAAIRAALAA----AG   76 (245)
T ss_pred             ccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeEEEecCCCHHHHHHHHHH----hC
Confidence            35688999999999999999999999999999999999987766665543   356788999999988887765    46


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||++...   ..+..+.+.+++++++++|+.+++.+++++.+.+.+++ .++|+++||...    ..+....  
T Consensus        77 ~~d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~--  147 (245)
T PRK07060         77 AFDGLVNCAGIAS---LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA----LVGLPDH--  147 (245)
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH----cCCCCCC--
Confidence            8999999987643   24455678899999999999999999999999986544 478999995432    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||++++.+++.++.++.+.||+++++.| +.+.++                      ++  ++|+++.+.++  
T Consensus       148 -~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l--  223 (245)
T PRK07060        148 -LAYCASKAALDAITRVLCVELGPHGIRVNSVNP-TVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFL--  223 (245)
T ss_pred             -cHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEee-CCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--
Confidence             669999999999999999999999999999999 666554                      11  78999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++....++|+.+.+|||+.
T Consensus       224 ~~~~~~~~~G~~~~~~~g~~  243 (245)
T PRK07060        224 LSDAASMVSGVSLPVDGGYT  243 (245)
T ss_pred             cCcccCCccCcEEeECCCcc
Confidence            88888899999999999973

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-32  Score=224.31  Aligned_cols=218  Identities=27%  Similarity=0.365  Sum_probs=182.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++|||++++||+.++++|+++|++ |++++|+.+...+..+++.  ..++.++.+|++++++++++++.+.+.++
T Consensus         4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (260)
T PRK06198          4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFG   83 (260)
T ss_pred             CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            68899999999999999999999999999 9999998766665554442  23577889999999999999999999899


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||+++...   ...+.+.+.++++.++++|+.+++.+++.++|.|.+++ .++++++||....    .+.+..  
T Consensus        84 ~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~----~~~~~~--  154 (260)
T PRK06198         84 RLDALVNAAGLTD---RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAH----GGQPFL--  154 (260)
T ss_pred             CCCEEEECCCcCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccc----cCCCCc--
Confidence            9999999987543   24556789999999999999999999999999996653 5889999955432    122222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAA  230 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~  230 (255)
                       ..|+++|++++++++.++.|+...+|+|++++| +.+.++                           ++  +++++..+
T Consensus       155 -~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  232 (260)
T PRK06198        155 -AAYCASKGALATLTRNAAYALLRNRIRVNGLNI-GWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAV  232 (260)
T ss_pred             -chhHHHHHHHHHHHHHHHHHhcccCeEEEEEee-ccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHH
Confidence             569999999999999999999999999999999 655432                           01  88999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .++  +++...+++|+.+.+|||-
T Consensus       233 ~~l--~~~~~~~~~G~~~~~~~~~  254 (260)
T PRK06198        233 AFL--LSDESGLMTGSVIDFDQSV  254 (260)
T ss_pred             HHH--cChhhCCccCceEeECCcc
Confidence            999  8888889999999999983

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-32  Score=221.20  Aligned_cols=208  Identities=20%  Similarity=0.236  Sum_probs=175.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |.+|+++||||+++||++++++|+++|++|++++|+.+..         ....++.+|+++.++++++++++.+.+ ++|
T Consensus         1 ~~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d   70 (234)
T PRK07577          1 MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD---------FPGELFACDLADIEQTAATLAQINEIH-PVD   70 (234)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc---------cCceEEEeeCCCHHHHHHHHHHHHHhC-CCc
Confidence            3578999999999999999999999999999999986541         112468899999999999999998875 689


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||++....   .++.+.+.+++++.+++|+.+++.+.+.++|.|++++.++|+++||....     +.+..   ..|
T Consensus        71 ~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-----~~~~~---~~Y  139 (234)
T PRK07577         71 AIVNNVGIALP---QPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF-----GALDR---TSY  139 (234)
T ss_pred             EEEECCCCCCC---CChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc-----CCCCc---hHH
Confidence            99999876542   34556789999999999999999999999999987778899999965321     12222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------hHHhhhhhhhhhhccCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------AIASIANAALYNMAKDD  238 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------~~~~~~~~~~~l~~~~~  238 (255)
                      ++||++++++++.++.|++++||+|++|+| +.+.|+.                         .|+|++..+.++  +++
T Consensus       140 ~~sK~a~~~~~~~~a~e~~~~gi~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l--~~~  216 (234)
T PRK07577        140 SAAKSALVGCTRTWALELAEYGITVNAVAP-GPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFL--LSD  216 (234)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEec-CcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHH--hCc
Confidence            999999999999999999999999999999 6665530                         178999999999  777


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ...+++|+.+.+|||.+
T Consensus       217 ~~~~~~g~~~~~~g~~~  233 (234)
T PRK07577        217 DAGFITGQVLGVDGGGS  233 (234)
T ss_pred             ccCCccceEEEecCCcc
Confidence            78899999999999853

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-31  Score=218.46  Aligned_cols=220  Identities=24%  Similarity=0.296  Sum_probs=185.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++|||++++||++++++|+++|++|++++|+++...+..+++.......+.+|++|.++++++++++.+.+++
T Consensus         3 ~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (239)
T PRK12828          3 HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGR   82 (239)
T ss_pred             CCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            35678999999999999999999999999999999998876666555554456778889999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||+++...   .....+.+.+++++.+++|+.+++.++++++|.+.+++.++++++||....    .+.+..   .
T Consensus        83 ~d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~~~---~  152 (239)
T PRK12828         83 LDALVNIAGAFV---WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAAL----KAGPGM---G  152 (239)
T ss_pred             cCEEEECCcccC---cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhc----cCCCCc---c
Confidence            999999976543   234556688999999999999999999999999987778899999965432    222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------H---h--HHhhhhhhhhhhccCCCCCeeecee
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------E---A--IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      .|+++|++++.+++.++.++.+.||+++.+.| +.+.++         +   +  +++++..+.++  +++...+++|+.
T Consensus       153 ~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~p-g~v~~~~~~~~~~~~~~~~~~~~~dva~~~~~~--l~~~~~~~~g~~  229 (239)
T PRK12828        153 AYAAAKAGVARLTEALAAELLDRGITVNAVLP-SIIDTPPNRADMPDADFSRWVTPEQIAAVIAFL--LSDEAQAITGAS  229 (239)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CcccCcchhhcCCchhhhcCCCHHHHHHHHHHH--hCcccccccceE
Confidence            69999999999999999999999999999999 666554         1   1  78999999988  777777899999


Q ss_pred             EEecCCc
Q 025252          248 LLVNGGF  254 (255)
Q Consensus       248 i~~dgG~  254 (255)
                      +.+|||.
T Consensus       230 ~~~~g~~  236 (239)
T PRK12828        230 IPVDGGV  236 (239)
T ss_pred             EEecCCE
Confidence            9999985

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-31  Score=226.30  Aligned_cols=203  Identities=24%  Similarity=0.318  Sum_probs=168.7

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ...+++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.  ...+.++.+|++|.++++++++++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            466889999999999999999999999999999999999887777666553  245778999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCC--CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILD--TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++++|++|||||....   .++.+  .++++++.++++|+.+++.++++++|.|++++.++|+++||.+....   ..+.
T Consensus       115 ~g~id~li~~AG~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~---~~p~  188 (293)
T PRK05866        115 IGGVDILINNAGRSIR---RPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSE---ASPL  188 (293)
T ss_pred             cCCCCEEEECCCCCCC---cchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCC---CCCC
Confidence            9999999999876542   22222  24688999999999999999999999998888899999996432110   1122


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------------h-HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------------A-IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------------~-~~~~~~~~~~l  233 (255)
                         ...|++||+|++++++.++.|++++||+|++++| +.++|+.            + ||++++.+...
T Consensus       189 ---~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~p-g~v~T~~~~~~~~~~~~~~~~pe~vA~~~~~~  254 (293)
T PRK05866        189 ---FSVYNASKAALSAVSRVIETEWGDRGVHSTTLYY-PLVATPMIAPTKAYDGLPALTADEAAEWMVTA  254 (293)
T ss_pred             ---cchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEc-CcccCccccccccccCCCCCCHHHHHHHHHHH
Confidence               2569999999999999999999999999999999 7887761            1 78888877666

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-31  Score=219.41  Aligned_cols=218  Identities=28%  Similarity=0.407  Sum_probs=180.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ----DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~----~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++|+++||||+++||+++++.|+++|++|++++|.    .+..+++.++..  ..++.++.+|++++++++++++++.+
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   83 (249)
T PRK12827          4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVE   83 (249)
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            568899999999999999999999999999997653    333444444432  24688899999999999999999988


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHH-HHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAA-RVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~-~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .++++|++|||+|....   .++.+.+.+++++++++|+.+++.+++.+. +.+++++.++++++||....    .+..+
T Consensus        84 ~~~~~d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~~  156 (249)
T PRK12827         84 EFGRLDILVNNAGIATD---AAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGV----RGNRG  156 (249)
T ss_pred             HhCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhc----CCCCC
Confidence            88899999999876542   456677899999999999999999999999 77766667889999954432    22222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H--hHHhhhhhhhhhhcc
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E--AIASIANAALYNMAK  236 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~--~~~~~~~~~~~l~~~  236 (255)
                      .   ..|+++|++++.+++.++.|+++.||++++++| +.++|+                  .  -++++++.+.++  +
T Consensus       157 ~---~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~  230 (249)
T PRK12827        157 Q---VNYAASKAGLIGLTKTLANELAPRGITVNAVAP-GAINTPMADNAAPTEHLLNPVPVQRLGEPDEVAALVAFL--V  230 (249)
T ss_pred             C---chhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEE-CCcCCCcccccchHHHHHhhCCCcCCcCHHHHHHHHHHH--c
Confidence            2   569999999999999999999999999999999 777554                  0  178999999998  7


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++...+++|+.+.+|||.
T Consensus       231 ~~~~~~~~g~~~~~~~g~  248 (249)
T PRK12827        231 SDAASYVTGQVIPVDGGF  248 (249)
T ss_pred             CcccCCccCcEEEeCCCC
Confidence            788889999999999996

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-31  Score=220.34  Aligned_cols=198  Identities=19%  Similarity=0.185  Sum_probs=166.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCC-ceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..++..++++.. ++.++.+|++|+++++++++++.+.++.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            478999999999999999999999999999999988777776665432 6889999999999999999999999999999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +|||||.....  ....+.+.++++.++++|+.+++++++.++|.|++++.++|+++||..+    ..+.+..   ..|+
T Consensus        82 lv~~ag~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~----~~~~~~~---~~Y~  152 (257)
T PRK07024         82 VIANAGISVGT--LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAG----VRGLPGA---GAYS  152 (257)
T ss_pred             EEECCCcCCCc--cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhh----cCCCCCC---cchH
Confidence            99998754321  1223368899999999999999999999999998888899999995543    2222222   5699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------h-HHhhhhhhhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------A-IASIANAALYN  233 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------~-~~~~~~~~~~l  233 (255)
                      +||++++.+++.++.|++++||+|++++| +.++|+.           . |++++..+...
T Consensus       153 asK~a~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~a~~~~~~  212 (257)
T PRK07024        153 ASKAAAIKYLESLRVELRPAGVRVVTIAP-GYIRTPMTAHNPYPMPFLMDADRFAARAARA  212 (257)
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEec-CCCcCchhhcCCCCCCCccCHHHHHHHHHHH
Confidence            99999999999999999999999999999 7776651           1 78888888877

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-31  Score=240.03  Aligned_cols=216  Identities=23%  Similarity=0.310  Sum_probs=181.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++|||+++|||++++++|+++|++|+++++..  +...++.+++   +..++.+|++++++++++++.+.+.++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            36789999999999999999999999999999998853  2334444443   345788999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....   ..+.+.+.++|++++++|+.+++++.+.+.+.+..++.++|+++||..+    ..+.++.   
T Consensus       284 ~id~vi~~AG~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~----~~g~~~~---  353 (450)
T PRK08261        284 GLDIVVHNAGITRD---KTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISG----IAGNRGQ---  353 (450)
T ss_pred             CCCEEEECCCcCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhh----cCCCCCC---
Confidence            99999999876542   4566789999999999999999999999999655556789999995432    2222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H-----hHHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E-----AIASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~-----~~~~~~~~~~~l~~~~~  238 (255)
                      ..|+++|++++++++.++.|++++||++|+|+| +.++|+                 +     .|+|+++++.|+  +++
T Consensus       354 ~~Y~asKaal~~~~~~la~el~~~gi~v~~v~P-G~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~~l--~s~  430 (450)
T PRK08261        354 TNYAASKAGVIGLVQALAPLLAERGITINAVAP-GFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIAWL--ASP  430 (450)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEe-CcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHHHH--hCh
Confidence            669999999999999999999999999999999 767653                 0     188999999999  889


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      .+.++||++|.+|||.
T Consensus       431 ~~~~itG~~i~v~g~~  446 (450)
T PRK08261        431 ASGGVTGNVVRVCGQS  446 (450)
T ss_pred             hhcCCCCCEEEECCCc
Confidence            9999999999999985

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-31  Score=219.25  Aligned_cols=217  Identities=22%  Similarity=0.331  Sum_probs=181.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCC--CHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVS--NEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~--~~~~~~~~~~~~~~   97 (255)
                      .+++|+++|||++++||.+++++|++.|++|++++|+.+..+++.+++..   .++.++.+|++  ++++++++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999998777666655532   35667777876  78999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++||||+....  ..++.+.+.+.+++.+++|+.+++++++.++|+|.+++.++|+++||..    ...+....
T Consensus        89 ~~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~----~~~~~~~~  162 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGE--LGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSV----GRQGRANW  162 (247)
T ss_pred             HhCCCCEEEECCcccCC--CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHh----hcCCCCCC
Confidence            88999999999875432  2355677889999999999999999999999999888889999999543    22233223


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccCCCCCee
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~~~~~~~  243 (255)
                         ..|++||++++++++.++.++...||++++++| +.++++            .+  |+|+++.+.++  +++...++
T Consensus       163 ---~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  236 (247)
T PRK08945        163 ---GAYAVSKFATEGMMQVLADEYQGTNLRVNCINP-GGTRTAMRASAFPGEDPQKLKTPEDIMPLYLYL--MGDDSRRK  236 (247)
T ss_pred             ---cccHHHHHHHHHHHHHHHHHhcccCEEEEEEec-CCccCcchhhhcCcccccCCCCHHHHHHHHHHH--hCcccccc
Confidence               569999999999999999999999999999999 666544            11  79999999999  88889999


Q ss_pred             eceeEEec
Q 025252          244 GKQNLLVN  251 (255)
Q Consensus       244 ~G~~i~~d  251 (255)
                      +|+.+...
T Consensus       237 ~g~~~~~~  244 (247)
T PRK08945        237 NGQSFDAQ  244 (247)
T ss_pred             CCeEEeCC
Confidence            99987654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.2e-33  Score=209.06  Aligned_cols=220  Identities=28%  Similarity=0.396  Sum_probs=185.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ..++-+.+|||+.+|+|++.+++|++.|+.|++.+....+..+...+++ .++.|...|++++++++.+++..+.+||++
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            3578899999999999999999999999999999999999999988887 589999999999999999999999999999


Q ss_pred             cEEEEcCCCccc---cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEeccCCCccccccc
Q 025252          103 DILVNSGCNLEY---RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus       103 d~li~~a~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~is~~~~~~~~~~~  173 (255)
                      |++|||||..-.   -..++-...+.+++++++++|+.++|++++...-.|.++      ..|.|||..|+.    +..+
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasva----afdg  160 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVA----AFDG  160 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceee----eecC
Confidence            999999875421   223344567899999999999999999999998888654      368899988443    3334


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhHh-----------------------HHhhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEA-----------------------IASIANAA  230 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~~-----------------------~~~~~~~~  230 (255)
                      ..+.   ++|++||+++.++|.-++++++..|||++.|.| +.++|+-+                       |.|.+..+
T Consensus       161 q~gq---aaysaskgaivgmtlpiardla~~gir~~tiap-glf~tpllsslpekv~~fla~~ipfpsrlg~p~eyahlv  236 (260)
T KOG1199|consen  161 QTGQ---AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAP-GLFDTPLLSSLPEKVKSFLAQLIPFPSRLGHPHEYAHLV  236 (260)
T ss_pred             ccch---hhhhcccCceEeeechhhhhcccCceEEEeecc-cccCChhhhhhhHHHHHHHHHhCCCchhcCChHHHHHHH
Confidence            4333   889999999999999999999999999999999 99999822                       44544444


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      -..    -+..++||++|++||-+|
T Consensus       237 qai----ienp~lngevir~dgalr  257 (260)
T KOG1199|consen  237 QAI----IENPYLNGEVIRFDGALR  257 (260)
T ss_pred             HHH----HhCcccCCeEEEecceec
Confidence            433    357799999999999876

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-31  Score=229.01  Aligned_cols=193  Identities=17%  Similarity=0.191  Sum_probs=157.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.    ..++.++.+|++|.++++++++++.+
T Consensus        10 ~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~   89 (313)
T PRK05854         10 PDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRA   89 (313)
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            46889999999999999999999999999999999999877666655542    24688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----  172 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----  172 (255)
                      .++++|++|||||....    +..+.+.++++.++++|+.+++.+++.++|.|++. .++||++||.........     
T Consensus        90 ~~~~iD~li~nAG~~~~----~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~-~~riv~vsS~~~~~~~~~~~~~~  164 (313)
T PRK05854         90 EGRPIHLLINNAGVMTP----PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG-RARVTSQSSIAARRGAINWDDLN  164 (313)
T ss_pred             hCCCccEEEECCccccC----CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC-CCCeEEEechhhcCCCcCccccc
Confidence            99999999999876532    23356789999999999999999999999999654 689999996643221100     


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHh--cccCcEEeEeccCcchhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAEL--GRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~--~~~gi~v~~v~p~~~~~t~  220 (255)
                      ....+.+...|+.||+|++.+++.|++++  ..+||+||+++| |.++|+
T Consensus       165 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~P-G~v~T~  213 (313)
T PRK05854        165 WERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHP-GVAPTN  213 (313)
T ss_pred             ccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEec-ceeccC
Confidence            00112234679999999999999999864  457899999999 777664

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-31  Score=219.42  Aligned_cols=216  Identities=24%  Similarity=0.350  Sum_probs=177.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc-
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF-   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   99 (255)
                      +++|+++|||++++||++++++|+++|++|++. .|+.+..++..+.+.  ..++.++.+|++|++++.++++++.+.+ 
T Consensus         4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~   83 (254)
T PRK12746          4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQ   83 (254)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999775 677666555554443  2467889999999999999999998876 


Q ss_pred             -----CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252          100 -----GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       100 -----g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                           +++|++|||||....   ..+.+.+.+.+++++++|+.+++++++.++|.+.+  .++++++||...    ..+.
T Consensus        84 ~~~~~~~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~v~~sS~~~----~~~~  154 (254)
T PRK12746         84 IRVGTSEIDILVNNAGIGTQ---GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA--EGRVINISSAEV----RLGF  154 (254)
T ss_pred             cccCCCCccEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECCHHh----cCCC
Confidence                 479999999875432   45667789999999999999999999999999853  368999985432    2222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------H--hHHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------E--AIASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~--~~~~~~~~~  230 (255)
                      ++.   ..|++||++++.+++.++.++.++|++|+++.| +.+.++                      +  .++|++..+
T Consensus       155 ~~~---~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  230 (254)
T PRK12746        155 TGS---IAYGLSKGALNTMTLPLAKHLGERGITVNTIMP-GYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAV  230 (254)
T ss_pred             CCC---cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEE-CCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHH
Confidence            222   669999999999999999999999999999999 666553                      0  178999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .++  .++.+.+++|+.+.++||.
T Consensus       231 ~~l--~~~~~~~~~g~~~~i~~~~  252 (254)
T PRK12746        231 AFL--ASSDSRWVTGQIIDVSGGF  252 (254)
T ss_pred             HHH--cCcccCCcCCCEEEeCCCc
Confidence            888  7777788999999999985

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=7.5e-31  Score=224.95  Aligned_cols=222  Identities=18%  Similarity=0.101  Sum_probs=171.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++| ++|++++|+.+...++.+++..  .++.++.+|+++.++++++++++.+.+++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~   81 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP   81 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            47899999999999999999999999 9999999998877777666542  35778899999999999999999888899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCccccc---c----
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTE---I----  172 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~---~----  172 (255)
                      +|++|||||....  .....+.+.++|++++++|+.+++++++.++|.|++++  .++||++||..+.....   .    
T Consensus        82 iD~lI~nAG~~~~--~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        82 LDALVCNAAVYFP--TAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCEEEECCCcccc--CccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            9999999876431  12234568899999999999999999999999997664  48999999775432100   0    


Q ss_pred             --c-----------------CcCCCCCcccccchHHHHHHHHHHHHHhc-ccCcEEeEeccCcch-hhhH----------
Q 025252          173 --E-----------------GLCNIPANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVSHTYGL-AMAE----------  221 (255)
Q Consensus       173 --~-----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~p~~~~-~t~~----------  221 (255)
                        .                 .....+...|++||+++..+++.+++++. +.||+|++|+| |.+ .|+.          
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P-G~v~~T~l~~~~~~~~~~  238 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYP-GCIADTGLFREHVPLFRT  238 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecC-CcccCCcccccccHHHHH
Confidence              0                 01112346799999999999999999985 46999999999 655 3431          


Q ss_pred             ------------h--HHhhhhhhhhhhccCCCCCeeeceeEEec
Q 025252          222 ------------A--IASIANAALYNMAKDDDTSYVGKQNLLVN  251 (255)
Q Consensus       222 ------------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~d  251 (255)
                                  +  +++.+..+..+  ..+.....+|.++..+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~a~~l~~~--~~~~~~~~~g~~~~~~  280 (314)
T TIGR01289       239 LFPPFQKYITKGYVSEEEAGERLAQV--VSDPKLKKSGVYWSWG  280 (314)
T ss_pred             HHHHHHHHHhccccchhhhhhhhHHh--hcCcccCCCceeeecC
Confidence                        1  56666666666  3333333567766543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=6.1e-31  Score=206.43  Aligned_cols=220  Identities=26%  Similarity=0.295  Sum_probs=185.4

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .|+||+++|+|-.  ..|+..||+.+.+.|+++..+..++...+++.+..+. .....++||+++.++++++++++.+++
T Consensus         3 ~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~   82 (259)
T COG0623           3 LLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKW   82 (259)
T ss_pred             ccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhh
Confidence            5799999999987  5999999999999999999988776443333322221 245678999999999999999999999


Q ss_pred             CCccEEEEcCCCcc-ccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLE-YRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |++|.+||+-++.+ ....+.+.+.+.+.|...+++..++...+.+++.|.|.  .+|.|+-++    +......-|.+ 
T Consensus        83 g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~--~ggSiltLt----Ylgs~r~vPnY-  155 (259)
T COG0623          83 GKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMN--NGGSILTLT----YLGSERVVPNY-  155 (259)
T ss_pred             CcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcC--CCCcEEEEE----eccceeecCCC-
Confidence            99999999833333 22335667899999999999999999999999999994  578999888    54444444555 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh-----HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA-----IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~-----~~~~~~~~~~l~  234 (255)
                        ...+.+|+++++-+|.||.++.++|||||.|+- |+++|-                   |+     .||++...+|| 
T Consensus       156 --NvMGvAKAaLEasvRyLA~dlG~~gIRVNaISA-GPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fL-  231 (259)
T COG0623         156 --NVMGVAKAALEASVRYLAADLGKEGIRVNAISA-GPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFL-  231 (259)
T ss_pred             --chhHHHHHHHHHHHHHHHHHhCccCeEEeeecc-cchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHH-
Confidence              668999999999999999999999999999999 888885                   22     89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCc
Q 025252          235 AKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~  254 (255)
                       +||.++-+||+++.||+|+
T Consensus       232 -lSdLssgiTGei~yVD~G~  250 (259)
T COG0623         232 -LSDLSSGITGEIIYVDSGY  250 (259)
T ss_pred             -hcchhcccccceEEEcCCc
Confidence             9999999999999999997

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=4.1e-32  Score=212.80  Aligned_cols=208  Identities=27%  Similarity=0.339  Sum_probs=167.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL---GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++||.+++||+.+|||+++.++|+++|..+.++.-+.+.   ..++.+..+...+.|++||+++..++++.++++.+.
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            46889999999999999999999999999887776655544   333444445578999999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCc
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +|.||++||+||..           +..+|++.+++|+.+.++-+...+|||.++.   +|.|||.||+.    +..+.+
T Consensus        81 fg~iDIlINgAGi~-----------~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~----GL~P~p  145 (261)
T KOG4169|consen   81 FGTIDILINGAGIL-----------DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA----GLDPMP  145 (261)
T ss_pred             hCceEEEEcccccc-----------cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc----ccCccc
Confidence            99999999988754           3567999999999999999999999998764   68899999553    333333


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHH--hcccCcEEeEeccCcchhhh---------------------------HhHHhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAE--LGRYGIRVDCVSHTYGLAMA---------------------------EAIASI  226 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e--~~~~gi~v~~v~p~~~~~t~---------------------------~~~~~~  226 (255)
                      -.   ..|++||+++..||++||..  +.+.|||+++++| |++.|+                           ..|+++
T Consensus       146 ~~---pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCP-G~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~  221 (261)
T KOG4169|consen  146 VF---PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCP-GFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACC  221 (261)
T ss_pred             cc---hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECC-CcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHH
Confidence            33   55999999999999999886  4667999999999 988886                           015555


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      +..+.-.  +..   ..||+...+|.|
T Consensus       222 a~~~v~a--iE~---~~NGaiw~v~~g  243 (261)
T KOG4169|consen  222 AINIVNA--IEY---PKNGAIWKVDSG  243 (261)
T ss_pred             HHHHHHH--Hhh---ccCCcEEEEecC
Confidence            5555544  322   578888888876

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.98  E-value=7.1e-31  Score=217.56  Aligned_cols=219  Identities=29%  Similarity=0.439  Sum_probs=184.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||+++||++++++|+++|++|++++|+.+...+..+++..  .++.++.+|++|.++++++++++.+.+++
T Consensus         4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (251)
T PRK12826          4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR   83 (251)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            5789999999999999999999999999999999997766665554432  35888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||+++....   .++.+.+.+++++.+++|+.+++.+++.++|.|++++.++++++||..+..   .+.+.   ..
T Consensus        84 ~d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~---~~~~~---~~  154 (251)
T PRK12826         84 LDILVANAGIFPL---TPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPR---VGYPG---LA  154 (251)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhc---cCCCC---cc
Confidence            9999999765542   445677889999999999999999999999999877778999999654320   12222   25


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l~~~~~  238 (255)
                      .|+++|++++++++.++.++++.|++++.+.| +.+.++                  +   +  ++|+++.+.++  +++
T Consensus       155 ~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~  231 (251)
T PRK12826        155 HYAASKAGLVGFTRALALELAARNITVNSVHP-GGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFL--ASD  231 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHcCeEEEEEee-CCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCc
Confidence            69999999999999999999999999999999 665553                  1   1  78999999988  777


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      ...+++|+.+.+|||.
T Consensus       232 ~~~~~~g~~~~~~~g~  247 (251)
T PRK12826        232 EARYITGQTLPVDGGA  247 (251)
T ss_pred             cccCcCCcEEEECCCc
Confidence            7778999999999996

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.98  E-value=1.8e-31  Score=229.01  Aligned_cols=202  Identities=20%  Similarity=0.218  Sum_probs=160.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +..|++++||||++|||++++++|+++|++|++++|+++.++++.+++.    ..++..+.+|+++  ++.+.++++.+.
T Consensus        50 ~~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~  127 (320)
T PLN02780         50 KKYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKET  127 (320)
T ss_pred             cccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHH
Confidence            3468999999999999999999999999999999999988777766653    2367788999985  233334444444


Q ss_pred             cC--CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FG--KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g--~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+  ++|++|||||..... ...+.+.+.+++++++++|+.+++.+++.++|.|.+++.|+|+++||..+...+  +.+.
T Consensus       128 ~~~~didilVnnAG~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~--~~p~  204 (320)
T PLN02780        128 IEGLDVGVLINNVGVSYPY-ARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIP--SDPL  204 (320)
T ss_pred             hcCCCccEEEEecCcCCCC-CcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC--CCcc
Confidence            44  466999998765311 134667899999999999999999999999999988888999999965432111  1122


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------hHHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------AIASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------~~~~~~~~~~~l  233 (255)
                      .   +.|++||+++++++++|+.|++++||+|++|+| |.++|+.           -||++++.++..
T Consensus       205 ~---~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~P-G~v~T~~~~~~~~~~~~~~p~~~A~~~~~~  268 (320)
T PLN02780        205 Y---AVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVP-LYVATKMASIRRSSFLVPSSDGYARAALRW  268 (320)
T ss_pred             c---hHHHHHHHHHHHHHHHHHHHHhccCeEEEEEee-CceecCcccccCCCCCCCCHHHHHHHHHHH
Confidence            2   679999999999999999999999999999999 8888761           188888888776

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=1.4e-30  Score=215.23  Aligned_cols=220  Identities=32%  Similarity=0.460  Sum_probs=181.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .+++|+++|||++++||++++++|+++|++|+++.|+... .++..+++.  ..++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            5678999999999999999999999999999888776543 334444332  2468889999999999999999999888


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||+++....   ....+.+.+.+++++++|+.+++.+.+.+++.+.+++.++++++||...    ..+.+..  
T Consensus        82 ~~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~----~~~~~~~--  152 (248)
T PRK05557         82 GGVDILVNNAGITRD---NLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG----LMGNPGQ--  152 (248)
T ss_pred             CCCCEEEECCCcCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc----CcCCCCC--
Confidence            899999999765442   3445678899999999999999999999999997777788999995422    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~  237 (255)
                       ..|+++|++++.+++.++.++++.|+++++++| +.++++                    .+  ++++++.+.++  ++
T Consensus       153 -~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~  228 (248)
T PRK05557        153 -ANYAASKAGVIGFTKSLARELASRGITVNAVAP-GFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAVAFL--AS  228 (248)
T ss_pred             -chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEec-CccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cC
Confidence             569999999999999999999999999999999 665443                    01  78999999888  77


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +...+++|+.+.+|||++
T Consensus       229 ~~~~~~~g~~~~i~~~~~  246 (248)
T PRK05557        229 DEAAYITGQTLHVNGGMV  246 (248)
T ss_pred             cccCCccccEEEecCCcc
Confidence            777889999999999974

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.98  E-value=1.2e-30  Score=216.51  Aligned_cols=209  Identities=19%  Similarity=0.239  Sum_probs=173.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++|||+++|||+++++.|+++|++|++++|+++...++.+.++ .++.++.+|+++.++++++++++.+.++++|++|
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi   79 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLV   79 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            469999999999999999999999999999999887777666554 4688899999999999999999999889999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||||....  ..+..+.+.+++++++++|+.+++.+++.++|.+.+++.++|+++||...    ..+..+.   ..|+++
T Consensus        80 ~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~~---~~Y~~s  150 (248)
T PRK10538         80 NNAGLALG--LEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG----SWPYAGG---NVYGAT  150 (248)
T ss_pred             ECCCccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCccc----CCCCCCC---chhHHH
Confidence            99875421  13456678999999999999999999999999998777789999996532    2222222   679999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchh-hh---------------------Hh-HHhhhhhhhhhhccCCCCCee
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-MA---------------------EA-IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-t~---------------------~~-~~~~~~~~~~l~~~~~~~~~~  243 (255)
                      |++++++++.++.|+.+.||+|++|.| |.+. ++                     +. |+|++.+++++  ++....+.
T Consensus       151 K~~~~~~~~~l~~~~~~~~i~v~~v~p-g~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--~~~~~~~~  227 (248)
T PRK10538        151 KAFVRQFSLNLRTDLHGTAVRVTDIEP-GLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWV--ATLPAHVN  227 (248)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEEeC-CeecccccchhhccCcHHHHHhhccccCCCCHHHHHHHHHHH--hcCCCccc
Confidence            999999999999999999999999999 5543 21                     01 88999999999  76666677


Q ss_pred             eceeE
Q 025252          244 GKQNL  248 (255)
Q Consensus       244 ~G~~i  248 (255)
                      +|+..
T Consensus       228 ~~~~~  232 (248)
T PRK10538        228 INTLE  232 (248)
T ss_pred             chhhc
Confidence            76653

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.3e-31  Score=222.69  Aligned_cols=181  Identities=25%  Similarity=0.294  Sum_probs=155.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id  103 (255)
                      .+|+++||||++|||++++++|+++|++|++++|+++.++++.+    ..+.++.+|++|.++++++++++.+.+ +++|
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            46889999999999999999999999999999999877665543    257789999999999999999997776 6899


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||||....   ..+.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||..+    ..+.+.   ...|
T Consensus        79 ~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~----~~~~~~---~~~Y  148 (277)
T PRK05993         79 ALFNNGAYGQP---GAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILG----LVPMKY---RGAY  148 (277)
T ss_pred             EEEECCCcCCC---CCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhh----cCCCCc---cchH
Confidence            99999876542   4567788999999999999999999999999998888899999995432    222222   2679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ++||+++++++++++.|++++||+|++|+| |.++|+
T Consensus       149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~P-g~v~T~  184 (277)
T PRK05993        149 NASKFAIEGLSLTLRMELQGSGIHVSLIEP-GPIETR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCCEEEEEec-CCccCc
Confidence            999999999999999999999999999999 777664

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.98  E-value=4.2e-31  Score=207.10  Aligned_cols=219  Identities=19%  Similarity=0.212  Sum_probs=177.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEEE-ecCcch-HHHHHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHH--
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVIA-DVQDNL-GQALADKL-GHQDVCYIHCDVSNEREVINLVDTTVAK--   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~-~r~~~~-~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~--   98 (255)
                      ..|.++||||++|||..++++|.+. |.++++. .|+.+. .+++..+. .+.+++.++.|+++.++++++++++.+.  
T Consensus         2 spksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg   81 (249)
T KOG1611|consen    2 SPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVG   81 (249)
T ss_pred             CCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcc
Confidence            4466999999999999999999985 5566554 555665 33333332 2479999999999999999999999887  


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-----------cEEEeccCCCc
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-----------CILYTTGTGTT  167 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-----------~ii~is~~~~~  167 (255)
                      ..++|+||||||...  .+....+.+.+.|.+.+++|..+++++.|+|+|++++....           .|+|+||..++
T Consensus        82 ~~GlnlLinNaGi~~--~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s  159 (249)
T KOG1611|consen   82 SDGLNLLINNAGIAL--SYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGS  159 (249)
T ss_pred             cCCceEEEeccceee--ecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccc
Confidence            467999999988765  35667778899999999999999999999999999865433           89999966555


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h-HHhhhhhhhhhhccCCCC
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A-IASIANAALYNMAKDDDT  240 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~-~~~~~~~~~~l~~~~~~~  240 (255)
                          ..+....+..+|.+||+|+++++|.++.|+++.+|-|..++| |.+.|+.      + +||.+..+...  ..+..
T Consensus       160 ----~~~~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihP-GwV~TDMgg~~a~ltveeSts~l~~~--i~kL~  232 (249)
T KOG1611|consen  160 ----IGGFRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHP-GWVQTDMGGKKAALTVEESTSKLLAS--INKLK  232 (249)
T ss_pred             ----cCCCCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecC-CeEEcCCCCCCcccchhhhHHHHHHH--HHhcC
Confidence                344444455789999999999999999999999999999999 9998872      2 88888887777  55666


Q ss_pred             CeeeceeEEecC
Q 025252          241 SYVGKQNLLVNG  252 (255)
Q Consensus       241 ~~~~G~~i~~dg  252 (255)
                      ..-||..+.-||
T Consensus       233 ~~hnG~ffn~dl  244 (249)
T KOG1611|consen  233 NEHNGGFFNRDG  244 (249)
T ss_pred             cccCcceEccCC
Confidence            677888887775

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1e-30  Score=215.74  Aligned_cols=216  Identities=24%  Similarity=0.252  Sum_probs=177.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+|+++|||++++||++++++|+++|++|++++|+++..+++.+++..  .++.++.+|+++++++.++++++.++++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            457899999999999999999999999999999998776666555432  468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||+|....   .++.+.+.++++.++++|+.+++++++.++|+|++++.++|+++||....    .+...   ...
T Consensus        85 d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~----~~~~~---~~~  154 (241)
T PRK07454         85 DVLINNAGMAYT---GPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAAR----NAFPQ---WGA  154 (241)
T ss_pred             CEEEECCCccCC---CchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhC----cCCCC---ccH
Confidence            999999875432   34567788999999999999999999999999987777999999955332    22222   266


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------------h--HHhhhhhhhhhhccCCCCC-eeec
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------------A--IASIANAALYNMAKDDDTS-YVGK  245 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------------~--~~~~~~~~~~l~~~~~~~~-~~~G  245 (255)
                      |+++|++++.+++.++.|+++.||++++|.| +.++|+.              +  ++++++.+.++  +++... ++.+
T Consensus       155 Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~p-g~i~t~~~~~~~~~~~~~~~~~~~~~~va~~~~~l--~~~~~~~~~~~  231 (241)
T PRK07454        155 YCVSKAALAAFTKCLAEEERSHGIRVCTITL-GAVNTPLWDTETVQADFDRSAMLSPEQVAQTILHL--AQLPPSAVIED  231 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCCEEEEEec-CcccCCcccccccccccccccCCCHHHHHHHHHHH--HcCCccceeee
Confidence            9999999999999999999999999999999 6676641              1  89999999999  665544 4444


Q ss_pred             eeEEecCC
Q 025252          246 QNLLVNGG  253 (255)
Q Consensus       246 ~~i~~dgG  253 (255)
                      -.+.-++|
T Consensus       232 ~~~~~~~~  239 (241)
T PRK07454        232 LTLMPSAG  239 (241)
T ss_pred             EEeecCCC
Confidence            44444444

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.98  E-value=1.8e-30  Score=216.92  Aligned_cols=221  Identities=32%  Similarity=0.432  Sum_probs=182.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+++..+++.++....++.++.+|++|+++++++++++.+.++++
T Consensus         8 ~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   87 (264)
T PRK12829          8 PLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL   87 (264)
T ss_pred             ccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            46889999999999999999999999999999999998777776666543467889999999999999999999888999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |++||+++....  .......+.+++++++++|+.+++++++.+++.+++.+. ++|+++||...    ..+.+.   ..
T Consensus        88 d~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~----~~~~~~---~~  158 (264)
T PRK12829         88 DVLVNNAGIAGP--TGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG----RLGYPG---RT  158 (264)
T ss_pred             CEEEECCCCCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc----ccCCCC---Cc
Confidence            999999876522  234556788999999999999999999999999876655 67888874322    222222   25


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~  228 (255)
                      .|+++|++++.+++.++.+++..+++++++.| +.+.++                               ++  ++++++
T Consensus       159 ~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~  237 (264)
T PRK12829        159 PYAASKWAVVGLVKSLAIELGPLGIRVNAILP-GIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAA  237 (264)
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHH
Confidence            69999999999999999999989999999999 666443                               12  688889


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++  +++....++|+.+.+|||..
T Consensus       238 ~~~~l--~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        238 TALFL--ASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HHHHH--cCccccCccCcEEEeCCCcc
Confidence            88888  66666788999999999963

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.98  E-value=2.8e-31  Score=226.84  Aligned_cols=222  Identities=22%  Similarity=0.225  Sum_probs=170.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+...+..+++.    ..++.++.+|++|.++++++++++.+.
T Consensus        13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   92 (306)
T PRK06197         13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAA   92 (306)
T ss_pred             cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhh
Confidence            5789999999999999999999999999999999998776655444432    346888999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc-----
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE-----  173 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~-----  173 (255)
                      ++++|++|||||....     ....+.++++..+++|+.+++.+++.++|.|++.+.++||++||.+........     
T Consensus        93 ~~~iD~li~nAg~~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  167 (306)
T PRK06197         93 YPRIDLLINNAGVMYT-----PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ  167 (306)
T ss_pred             CCCCCEEEECCccccC-----CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccC
Confidence            9999999999876432     134577889999999999999999999999987777899999966432211000     


Q ss_pred             -CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEe--ccCcchhhhH------------------h---HHhhhhh
Q 025252          174 -GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV--SHTYGLAMAE------------------A---IASIANA  229 (255)
Q Consensus       174 -~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v--~p~~~~~t~~------------------~---~~~~~~~  229 (255)
                       .....+...|++||++++.+++.++++++++|++|+++  +| |.++|+.                  +   +++-+..
T Consensus       168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  246 (306)
T PRK06197        168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHP-GVSNTELARNLPRALRPVATVLAPLLAQSPEMGALP  246 (306)
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCC-CcccCcccccCcHHHHHHHHHHHhhhcCCHHHHHHH
Confidence             01122346799999999999999999999989887766  69 7777751                  0   2333333


Q ss_pred             hhhhhccCCCCCeeeceeEEecCC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      .+++  . ......+|+.+..||+
T Consensus       247 ~~~~--~-~~~~~~~g~~~~~~~~  267 (306)
T PRK06197        247 TLRA--A-TDPAVRGGQYYGPDGF  267 (306)
T ss_pred             HHHH--h-cCCCcCCCeEEccCcc
Confidence            3333  2 3344568988877764

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.98  E-value=8e-31  Score=220.42  Aligned_cols=214  Identities=21%  Similarity=0.253  Sum_probs=177.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||++|||++++++|+++|++|++++|+++..++..+++..   ..+.++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999999999988776666555432   2345678999999999999999999899999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++|||+|...   ...+.+.+.+++++++++|+.+++.+++.++|.|.++ +.++|+++||..+    ..+.+..   ..
T Consensus        81 ~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~----~~~~~~~---~~  150 (272)
T PRK07832         81 VVMNIAGISA---WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG----LVALPWH---AA  150 (272)
T ss_pred             EEEECCCCCC---CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc----cCCCCCC---cc
Confidence            9999987643   2456788999999999999999999999999999654 3589999995532    2222222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------H-h-HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------E-A-IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~-~-~~~~~~~~~~l~  234 (255)
                      |++||++++++++.++.|+.++||+|++|+| +.++|+                          + . |++++..+.++ 
T Consensus       151 Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~~-  228 (272)
T PRK07832        151 YSASKFGLRGLSEVLRFDLARHGIGVSVVVP-GAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAAEKILAG-  228 (272)
T ss_pred             hHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 766553                          0 1 89999999988 


Q ss_pred             ccCCCCCeeeceeEEecCCc
Q 025252          235 AKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~  254 (255)
                       + +...+++++.+.+++|+
T Consensus       229 -~-~~~~~~~~~~~~~~~~~  246 (272)
T PRK07832        229 -V-EKNRYLVYTSPDIRALY  246 (272)
T ss_pred             -H-hcCCeEEecCcchHHHH
Confidence             4 35678999988888874

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.98  E-value=1.9e-30  Score=214.14  Aligned_cols=220  Identities=33%  Similarity=0.456  Sum_probs=184.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +|.+|+++|||++++||+.++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5678899999999999999999999999999999999877666655543  24688889999999999999999988889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||+++....   .+..+.+.+++++.++.|+.+++++++.+.|.+.+.+.++|+++||.+.    ..+.   .+.
T Consensus        82 ~id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~----~~~~---~~~  151 (246)
T PRK05653         82 ALDILVNNAGITRD---ALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSG----VTGN---PGQ  151 (246)
T ss_pred             CCCEEEECCCcCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHh----ccCC---CCC
Confidence            99999999765432   4456678899999999999999999999999997777789999995432    2222   223


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------------------h--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------------------A--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------------------~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+.+|++++.+++.+++++.+.|++++++.| +.+.++.                    +  ++++++.+.++  +++
T Consensus       152 ~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~--~~~  228 (246)
T PRK05653        152 TNYSAAKAGVIGFTKALALELASRGITVNAVAP-GFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVAFL--ASD  228 (246)
T ss_pred             cHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEe-CCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCc
Confidence            669999999999999999999999999999999 5554430                    0  48999999999  777


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      ....++|+++.+|||.+
T Consensus       229 ~~~~~~g~~~~~~gg~~  245 (246)
T PRK05653        229 AASYITGQVIPVNGGMY  245 (246)
T ss_pred             hhcCccCCEEEeCCCee
Confidence            77889999999999964

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.98  E-value=1.8e-30  Score=215.54  Aligned_cols=217  Identities=32%  Similarity=0.479  Sum_probs=173.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch--HHHHHHHhC-C--CceEEEEeeCCC-HHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL--GQALADKLG-H--QDVCYIHCDVSN-EREVINLVDTTV   96 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~--~~~~~~~~~-~--~~~~~~~~D~~~-~~~~~~~~~~~~   96 (255)
                      .+.+|+++|||+++|||+++|+.|+++|++|+++.++.+.  .+++.+... .  ..+.+..+|+++ .++++.+++++.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4688999999999999999999999999999888887654  233322221 1  257788899998 999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|++|||||.....  .++.+.+.++|++++++|+.+++.+++.+.|.++++   +|+++||..+. .    .+.
T Consensus        82 ~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~---~Iv~isS~~~~-~----~~~  151 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD--APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ---RIVNISSVAGL-G----GPP  151 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC---eEEEECCchhc-C----CCC
Confidence            9999999999998866421  356778889999999999999999999888888733   99999955432 1    111


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------h--HHhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------A--IASIANAAL  231 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------~--~~~~~~~~~  231 (255)
                      .  ..+|++||+|+++|++.++.|+.++||+|++|+| |.++|+.                       +  |++++..+.
T Consensus       152 ~--~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~P-G~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (251)
T COG1028         152 G--QAAYAASKAALIGLTKALALELAPRGIRVNAVAP-GYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVA  228 (251)
T ss_pred             C--cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEe-ccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            0  2569999999999999999999999999999999 5766651                       1  455666666


Q ss_pred             hhhccCC-CCCeeeceeEEecCCc
Q 025252          232 YNMAKDD-DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~-~~~~~~G~~i~~dgG~  254 (255)
                      ++  .+. ...+++|+.+.+|||+
T Consensus       229 ~~--~~~~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         229 FL--ASDEAASYITGQTLPVDGGL  250 (251)
T ss_pred             HH--cCcchhccccCCEEEeCCCC
Confidence            66  433 4779999999999986

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.97  E-value=2.4e-30  Score=213.98  Aligned_cols=216  Identities=24%  Similarity=0.346  Sum_probs=176.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||+++||++++++|+++|++|++. .|+++...+...++.  ..++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            579999999999999999999999999774 566665555544432  23578899999999999999999998899999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC---CCCcEEEeccCCCcccccccCcCCCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|||++....  .....+.+.++++.++++|+.+++.+++.+++.+.++   ++++++++||....    .+.+.  +.
T Consensus        82 ~vi~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~----~~~~~--~~  153 (247)
T PRK09730         82 ALVNNAGILFT--QCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR----LGAPG--EY  153 (247)
T ss_pred             EEEECCCCCCC--CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc----cCCCC--cc
Confidence            99999875422  2345677889999999999999999999999998654   25789999965332    12111  11


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H-----hHHhhhhhhhhhhccC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E-----AIASIANAALYNMAKD  237 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~-----~~~~~~~~~~~l~~~~  237 (255)
                      ..|+++|++++++++.++.|+.+.||+++++.| +.+.++                  +     .++++++.+.++  ++
T Consensus       154 ~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~--~~  230 (247)
T PRK09730        154 VDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRP-GFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQAIVWL--LS  230 (247)
T ss_pred             cchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEe-CCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHhh--cC
Confidence            359999999999999999999999999999999 666553                  1     178999999999  78


Q ss_pred             CCCCeeeceeEEecCC
Q 025252          238 DDTSYVGKQNLLVNGG  253 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG  253 (255)
                      +...+++|+++.+|||
T Consensus       231 ~~~~~~~g~~~~~~g~  246 (247)
T PRK09730        231 DKASYVTGSFIDLAGG  246 (247)
T ss_pred             hhhcCccCcEEecCCC
Confidence            8888999999999998

>PRK05855 short chain dehydrogenase; Validated

Probab=99.97  E-value=1.2e-30  Score=240.58  Aligned_cols=202  Identities=26%  Similarity=0.307  Sum_probs=172.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..+.+++++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            45788999999999999999999999999999999999887777665553  2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |++|++|||||...   ...+.+.+.+++++++++|+.+++++++.++|.|.+++ +|+||++||..+.    .+.++. 
T Consensus       391 g~id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----~~~~~~-  462 (582)
T PRK05855        391 GVPDIVVNNAGIGM---AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAY----APSRSL-  462 (582)
T ss_pred             CCCcEEEECCccCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhc----cCCCCC-
Confidence            99999999987654   24567789999999999999999999999999997765 4899999965432    222223 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H-h-HHhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E-A-IASIAN  228 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~-~-~~~~~~  228 (255)
                        ..|++||++++++++.++.|++++||+|++|+| |.++|+                            . + ||+++.
T Consensus       463 --~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~  539 (582)
T PRK05855        463 --PAYATSKAAVLMLSECLRAELAAAGIGVTAICP-GFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAK  539 (582)
T ss_pred             --cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe-CCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHH
Confidence              679999999999999999999999999999999 877773                            0 1 799999


Q ss_pred             hhhhhh
Q 025252          229 AALYNM  234 (255)
Q Consensus       229 ~~~~l~  234 (255)
                      .++..+
T Consensus       540 ~~~~~~  545 (582)
T PRK05855        540 AIVDAV  545 (582)
T ss_pred             HHHHHH
Confidence            998883

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.1e-30  Score=215.75  Aligned_cols=201  Identities=21%  Similarity=0.308  Sum_probs=169.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |++++|+++||||++|||++++++|+++|++|++++|+++...++..++. ..++.++.+|++|+++++++++.+.+ ++
T Consensus         1 m~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          1 MDLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            35688999999999999999999999999999999999887777666542 24788899999999999999998876 78


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+...   ..++.+.+.+++++++++|+.+++.+++.++|+|.+++.++++++||..    +..+.++.   
T Consensus        80 ~id~lv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~----~~~~~~~~---  149 (263)
T PRK09072         80 GINVLINNAGVNH---FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTF----GSIGYPGY---  149 (263)
T ss_pred             CCCEEEECCCCCC---ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChh----hCcCCCCc---
Confidence            9999999987543   2456678899999999999999999999999999877778999998543    22233333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------Hh--HHhhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------EA--IASIANAALYNM  234 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~~--~~~~~~~~~~l~  234 (255)
                      ..|+++|++++++++.++.|+.++||+|++++| +.++|+               ++  +++++..+.+++
T Consensus       150 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P-g~~~t~~~~~~~~~~~~~~~~~~~~~~~va~~i~~~~  219 (263)
T PRK09072        150 ASYCASKFALRGFSEALRRELADTGVRVLYLAP-RATRTAMNSEAVQALNRALGNAMDDPEDVAAAVLQAI  219 (263)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CcccccchhhhcccccccccCCCCCHHHHHHHHHHHH
Confidence            569999999999999999999999999999999 776654               11  789999999884

>PRK08324 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.9e-30  Score=241.70  Aligned_cols=219  Identities=32%  Similarity=0.455  Sum_probs=187.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+.+|+++||||++|||++++++|+++|++|++++|+.+..++..+++.. .++.++.+|++++++++++++++.+.+|+
T Consensus       419 ~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~  498 (681)
T PRK08324        419 PLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGG  498 (681)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46889999999999999999999999999999999998877776666543 37889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||....   .++.+.+.++|+.++++|+.+++.+++.+.+.|++++. ++|+++||...    ..+.++.   
T Consensus       499 iDvvI~~AG~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~----~~~~~~~---  568 (681)
T PRK08324        499 VDIVVSNAGIAIS---GPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA----VNPGPNF---  568 (681)
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc----cCCCCCc---
Confidence            9999999876542   45667899999999999999999999999999987664 89999995432    2233333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch--hhh--------------------------------Hh--HH
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL--AMA--------------------------------EA--IA  224 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~--~t~--------------------------------~~--~~  224 (255)
                      ..|++||++++++++.++.|+.++||+||+|+| +.+  ++.                                ++  ++
T Consensus       569 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P-g~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~  647 (681)
T PRK08324        569 GAYGAAKAAELHLVRQLALELGPDGIRVNGVNP-DAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPE  647 (681)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeC-ceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHH
Confidence            679999999999999999999999999999999 544  321                                01  78


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      |+++++.++  +++...+.+|+++.+|||.
T Consensus       648 DvA~a~~~l--~s~~~~~~tG~~i~vdgG~  675 (681)
T PRK08324        648 DVAEAVVFL--ASGLLSKTTGAIITVDGGN  675 (681)
T ss_pred             HHHHHHHHH--hCccccCCcCCEEEECCCc
Confidence            999999999  7777889999999999996

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.97  E-value=6.4e-30  Score=212.42  Aligned_cols=217  Identities=28%  Similarity=0.443  Sum_probs=180.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++|||++++||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            4789999999999999999999999999999999877766666543  24688899999999999999999998888999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++||+++....   ....+.+.+++++++++|+.+++.+++.+++.|++.+.++++++||....    .+.+..   ..|
T Consensus        81 ~vi~~a~~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~----~~~~~~---~~y  150 (255)
T TIGR01963        81 ILVNNAGIQHV---APIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGL----VASPFK---SAY  150 (255)
T ss_pred             EEEECCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhc----CCCCCC---chh
Confidence            99999875432   34456678899999999999999999999999987777899999954322    122222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IASIANA  229 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~~~~~  229 (255)
                      +++|++++++++.++.++.+.+|+|+.++| +.+.++                                ++  ++|+++.
T Consensus       151 ~~sk~a~~~~~~~~~~~~~~~~i~v~~i~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~  229 (255)
T TIGR01963       151 VAAKHGLIGLTKVLALEVAAHGITVNAICP-GYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAET  229 (255)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHH
Confidence            999999999999999999989999999999 554332                                12  7899999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++  +++....++|+++.+|||++
T Consensus       230 ~~~~--~~~~~~~~~g~~~~~~~g~~  253 (255)
T TIGR01963       230 ALFL--ASDAAAGITGQAIVLDGGWT  253 (255)
T ss_pred             HHHH--cCccccCccceEEEEcCccc
Confidence            9988  66666678999999999986

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.97  E-value=3.6e-30  Score=213.68  Aligned_cols=212  Identities=14%  Similarity=0.187  Sum_probs=170.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC--cc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK--LD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--id  103 (255)
                      |+++||||++|||++++++|+++|++|++++|++ +...++.++. ..++.++.+|++++++++++++++.+.++.  ++
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            6899999999999999999999999999999986 3444443332 246888999999999999999998876653  22


Q ss_pred             --EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccccCcCCCCC
Q 025252          104 --ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       104 --~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                        ++|||||....  ..++.+.+.+++++.+++|+.+++.+++.++|++++. ..++|+++||...    ..+.++   .
T Consensus        81 ~~~~v~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~---~  151 (251)
T PRK06924         81 SIHLINNAGMVAP--IKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAA----KNPYFG---W  151 (251)
T ss_pred             ceEEEEcceeccc--CcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhh----cCCCCC---c
Confidence              78898765432  2456788999999999999999999999999999764 3578999995432    222222   3


Q ss_pred             cccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAA  230 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~  230 (255)
                      ..|+++|++++++++.++.|+.  +.||+|++|.| +.++|+                          ++  |++++..+
T Consensus       152 ~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  230 (251)
T PRK06924        152 SAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSP-GVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKAL  230 (251)
T ss_pred             HHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecC-CccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHH
Confidence            6799999999999999999975  46899999999 666553                          12  78999999


Q ss_pred             hhhhccCCCCCeeeceeEEecC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                      +++  +++. .+++|+.+.+|+
T Consensus       231 ~~l--~~~~-~~~~G~~~~v~~  249 (251)
T PRK06924        231 RNL--LETE-DFPNGEVIDIDE  249 (251)
T ss_pred             HHH--Hhcc-cCCCCCEeehhh
Confidence            999  6653 789999999986

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.6e-30  Score=215.52  Aligned_cols=212  Identities=21%  Similarity=0.216  Sum_probs=166.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+.+ ..+.+.++++  ..++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK07806          4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG   83 (248)
T ss_pred             CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            67899999999999999999999999999999998753 3444443332  24678899999999999999999988889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-ccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-IEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-~~~~~~~~  179 (255)
                      ++|++||||+....         ....++..+++|+.+++++++.+.|.|.+  .++++++||........ ...+.   
T Consensus        84 ~~d~vi~~ag~~~~---------~~~~~~~~~~vn~~~~~~l~~~~~~~~~~--~~~iv~isS~~~~~~~~~~~~~~---  149 (248)
T PRK07806         84 GLDALVLNASGGME---------SGMDEDYAMRLNRDAQRNLARAALPLMPA--GSRVVFVTSHQAHFIPTVKTMPE---  149 (248)
T ss_pred             CCcEEEECCCCCCC---------CCCCcceeeEeeeHHHHHHHHHHHhhccC--CceEEEEeCchhhcCccccCCcc---
Confidence            99999999764321         11134578899999999999999999843  47899998643221111 11111   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                      ...|++||++++.+++.++.|+++.||+|++++| +.++++                      ++  |+|++.++.++  
T Consensus       150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  226 (248)
T PRK07806        150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSG-DMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARA--  226 (248)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCC-ccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHH--
Confidence            3579999999999999999999999999999999 544431                      12  88999999999  


Q ss_pred             cCCCCCeeeceeEEecCCc
Q 025252          236 KDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +.+++|+++.++||-
T Consensus       227 ~~--~~~~~g~~~~i~~~~  243 (248)
T PRK07806        227 VT--APVPSGHIEYVGGAD  243 (248)
T ss_pred             hh--ccccCccEEEecCcc
Confidence            54  457899999999984

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.3e-30  Score=216.52  Aligned_cols=182  Identities=28%  Similarity=0.339  Sum_probs=156.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+|+++||||++|||++++++|+++|++|++++|+++..+++.+... .++.++.+|++|.+++.++++++.+.++++|+
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~   81 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHP-DRALARLLDVTDFDAIDAVVADAEATFGPIDV   81 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcC-CCeeEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            46889999999999999999999999999999999877666655432 46888999999999999999999999999999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +|||||...   ..+..+.+.+++++++++|+.+++++++.++|.+++++.++||++||.++.    .+.++   ...|+
T Consensus        82 vv~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~----~~~~~---~~~Y~  151 (277)
T PRK06180         82 LVNNAGYGH---EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGL----ITMPG---IGYYC  151 (277)
T ss_pred             EEECCCccC---CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEeccccc----CCCCC---cchhH
Confidence            999987653   245667889999999999999999999999999988778899999965432    22222   26799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA  218 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~  218 (255)
                      ++|++++++++.++.|+++.|++|+++.| +.+.
T Consensus       152 ~sK~a~~~~~~~la~e~~~~gi~v~~i~P-g~v~  184 (277)
T PRK06180        152 GSKFALEGISESLAKEVAPFGIHVTAVEP-GSFR  184 (277)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEec-CCcc
Confidence            99999999999999999999999999999 5543

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.1e-30  Score=212.54  Aligned_cols=198  Identities=21%  Similarity=0.248  Sum_probs=160.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcch-HHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNL-GQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~-~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++|+++||||++|||++++++|+++| ++|++++|+++. .+++.+++..   .++.++++|++|.++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57889999999999999999999995 899999999875 5655554432   3688999999999999999999886 4


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||+|.....   .....+.++.++++++|+.+++.+++.++|.|++++.++|+++||..+.    .+.++.  
T Consensus        86 g~id~li~~ag~~~~~---~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~----~~~~~~--  156 (253)
T PRK07904         86 GDVDVAIVAFGLLGDA---EELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGE----RVRRSN--  156 (253)
T ss_pred             CCCCEEEEeeecCCch---hhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhc----CCCCCC--
Confidence            8999999997654321   1111244556678999999999999999999988888999999965432    222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------H--h-HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------E--A-IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------~--~-~~~~~~~~~~l~  234 (255)
                       ..|++||+++.+|++.++.|++++||+|++++| +.++|+        +  . +++++..+...+
T Consensus       157 -~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~A~~i~~~~  220 (253)
T PRK07904        157 -FVYGSTKAGLDGFYLGLGEALREYGVRVLVVRP-GQVRTRMSAHAKEAPLTVDKEDVAKLAVTAV  220 (253)
T ss_pred             -cchHHHHHHHHHHHHHHHHHHhhcCCEEEEEee-CceecchhccCCCCCCCCCHHHHHHHHHHHH
Confidence             569999999999999999999999999999999 777775        1  1 899999998873

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-30  Score=213.35  Aligned_cols=196  Identities=27%  Similarity=0.276  Sum_probs=167.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH-cCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK-FGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~id~l  105 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+..+++...+...++.++++|+++.++++++++++.+. ++++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            689999999999999999999999999999999888887777665567889999999999999999998776 6899999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      |||||....   ..+.+.+.+++++++++|+.+++.+++.+.++|+.++.++|+++||..+    ..+....   ..|++
T Consensus        82 i~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~~---~~Y~~  151 (260)
T PRK08267         82 FNNAGILRG---GPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASA----IYGQPGL---AVYSA  151 (260)
T ss_pred             EECCCCCCC---CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhh----CcCCCCc---hhhHH
Confidence            999876542   4566778999999999999999999999999998887899999995432    2222223   56999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------h-HHhhhhhhhhh
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------A-IASIANAALYN  233 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------~-~~~~~~~~~~l  233 (255)
                      ||++++++++.++.|++++||+|+++.| +.++|+.                   . +++++..++.+
T Consensus       152 sKaa~~~~~~~l~~~~~~~~i~v~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~  218 (260)
T PRK08267        152 TKFAVRGLTEALDLEWRRHGIRVADVMP-LFVDTAMLDGTSNEVDAGSTKRLGVRLTPEDVAEAVWAA  218 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEec-CCcCCcccccccchhhhhhHhhccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999 6665430                   1 78888888877

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=210.85  Aligned_cols=215  Identities=20%  Similarity=0.254  Sum_probs=172.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||+++||++++++|+++|++|++..|+. +...+......  ..++..+.+|++++++++++++++.+.+
T Consensus         3 ~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (252)
T PRK06077          3 SLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRY   82 (252)
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999998876543 33333222222  1357788999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||||....   .+..+.+.+.+++.+++|+.+++.+++++.|.+++  .++++++||..+    ..+.+   +
T Consensus        83 ~~~d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~sS~~~----~~~~~---~  150 (252)
T PRK06077         83 GVADILVNNAGLGLF---SPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE--GGAIVNIASVAG----IRPAY---G  150 (252)
T ss_pred             CCCCEEEECCCCCCC---CChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc--CcEEEEEcchhc----cCCCC---C
Confidence            999999999876432   34556788889999999999999999999999854  478999995432    22222   2


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYN  233 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l  233 (255)
                      ...|++||++++++++.+++|+++ +|+++.+.| +.++|+                        ++  ++|+++.++++
T Consensus       151 ~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v~P-g~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  228 (252)
T PRK06077        151 LSIYGAMKAAVINLTKYLALELAP-KIRVNAIAP-GFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAI  228 (252)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhc-CCEEEEEee-CCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHH
Confidence            367999999999999999999988 999999999 666544                        11  79999999998


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        ++  ...++|+++.+|+|++
T Consensus       229 --~~--~~~~~g~~~~i~~g~~  246 (252)
T PRK06077        229 --LK--IESITGQVFVLDSGES  246 (252)
T ss_pred             --hC--ccccCCCeEEecCCee
Confidence              43  2367899999999974

>PRK06194 hypothetical protein; Provisional

Probab=99.97  E-value=5.7e-30  Score=216.70  Aligned_cols=187  Identities=26%  Similarity=0.347  Sum_probs=157.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..  .++.++.+|++|.++++++++.+.+.++
T Consensus         3 ~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g   82 (287)
T PRK06194          3 DFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFG   82 (287)
T ss_pred             CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999999999988777766665532  3678899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC------CcEEEeccCCCcccccccC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR------GCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~ii~is~~~~~~~~~~~~  174 (255)
                      ++|++|||||....   .++.+.+.++|+.++++|+.++++++++++|.|.++..      ++|+++||..+.    .+.
T Consensus        83 ~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~----~~~  155 (287)
T PRK06194         83 AVHLLFNNAGVGAG---GLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL----LAP  155 (287)
T ss_pred             CCCEEEECCCCCCC---CCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc----cCC
Confidence            99999999876542   45567889999999999999999999999999876654      789999965432    222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcc--cCcEEeEeccCcchhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGR--YGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--~gi~v~~v~p~~~~~t~  220 (255)
                      +..   ..|++||++++.+++.++.|+..  .+||++++.| +.++|+
T Consensus       156 ~~~---~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~p-g~i~t~  199 (287)
T PRK06194        156 PAM---GIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCP-YFVPTG  199 (287)
T ss_pred             CCC---cchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEe-CcccCc
Confidence            222   56999999999999999999874  4699999999 777554

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.97  E-value=6.2e-30  Score=210.27  Aligned_cols=187  Identities=21%  Similarity=0.238  Sum_probs=163.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--C
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--G  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g  100 (255)
                      ...+|.|+|||..+|+|+.+|++|.++|.+|++...+++..+.++.+...++...++.|+|++++++++.+.+.++.  .
T Consensus        26 ~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~  105 (322)
T KOG1610|consen   26 SLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGED  105 (322)
T ss_pred             ccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccc
Confidence            46889999999999999999999999999999999888888888877755788889999999999999999998874  3


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++..||||||..+..  ++.+-.+.+++++++++|..|++.++++++|+++ +.+|||||+||.+    +..+.+..   
T Consensus       106 gLwglVNNAGi~~~~--g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr-~arGRvVnvsS~~----GR~~~p~~---  175 (322)
T KOG1610|consen  106 GLWGLVNNAGISGFL--GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR-RARGRVVNVSSVL----GRVALPAL---  175 (322)
T ss_pred             cceeEEecccccccc--CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH-hccCeEEEecccc----cCccCccc---
Confidence            599999999866543  5677789999999999999999999999999995 5679999999554    34444444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      .+|++||+|++.|+.++++|+.++||+|.+|-| |...|.
T Consensus       176 g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiieP-G~f~T~  214 (322)
T KOG1610|consen  176 GPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEP-GFFKTN  214 (322)
T ss_pred             ccchhhHHHHHHHHHHHHHHHHhcCcEEEEecc-Cccccc
Confidence            569999999999999999999999999999999 677765

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1e-29  Score=214.44  Aligned_cols=185  Identities=21%  Similarity=0.311  Sum_probs=155.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |++|+++||||+++||+++++.|+++|++|++++|+.+..++..++..    ..++.++.+|++|++++++ ++++.+.+
T Consensus         1 ~~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~   79 (280)
T PRK06914          1 MNKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEI   79 (280)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhc
Confidence            467899999999999999999999999999999999877666654432    2468899999999999999 99998888


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||||+....   ....+.+.+++++.+++|+.+++.+++.++|.|++++.++|+++||.+.    ..+.++   
T Consensus        80 ~~id~vv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~----~~~~~~---  149 (280)
T PRK06914         80 GRIDLLVNNAGYANG---GFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISG----RVGFPG---  149 (280)
T ss_pred             CCeeEEEECCccccc---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccc----cCCCCC---
Confidence            999999999875542   3456778899999999999999999999999998777889999995432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ...|++||+++++++++++.|++++||+|++++| +.++|+
T Consensus       150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~p-g~~~t~  189 (280)
T PRK06914        150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEP-GSYNTN  189 (280)
T ss_pred             CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEec-CCcccc
Confidence            2679999999999999999999999999999999 655443

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5e-30  Score=215.23  Aligned_cols=179  Identities=23%  Similarity=0.311  Sum_probs=153.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+.+....      ..++.++++|++|+++++++++++.+.+|++|+
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~   76 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP------IPGVELLELDVTDDASVQAAVDEVIARAGRIDV   76 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCE
Confidence            46789999999999999999999999999999998654321      236788999999999999999999999999999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +|||||....   ..+.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..+.    .+.+..   ..|+
T Consensus        77 li~~ag~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~----~~~~~~---~~Y~  146 (270)
T PRK06179         77 LVNNAGVGLA---GAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGF----LPAPYM---ALYA  146 (270)
T ss_pred             EEECCCCCCC---cCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCcccc----CCCCCc---cHHH
Confidence            9999876542   45667889999999999999999999999999988888999999965432    222222   5699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      +||++++++++.++.|++++||+|+++.| +.+.|+
T Consensus       147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~p-g~~~t~  181 (270)
T PRK06179        147 ASKHAVEGYSESLDHEVRQFGIRVSLVEP-AYTKTN  181 (270)
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEeC-CCcccc
Confidence            99999999999999999999999999999 665554

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.8e-29  Score=208.12  Aligned_cols=214  Identities=26%  Similarity=0.411  Sum_probs=175.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++|||++++||++++++|+++|++|++++|+.+...+..+++.  ..++.++.+|++++++++++++++.+.+++
T Consensus         5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (239)
T PRK07666          5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGS   84 (239)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999999999876666554443  246888999999999999999999998999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||++...   ...+.+.+.+++++.+++|+.+++++++.+.|.+.+++.++++++||...    ..+.+..   .
T Consensus        85 id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~----~~~~~~~---~  154 (239)
T PRK07666         85 IDILINNAGISK---FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAG----QKGAAVT---S  154 (239)
T ss_pred             ccEEEEcCcccc---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhh----ccCCCCC---c
Confidence            999999987543   23456778899999999999999999999999998887889999995432    2222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------h--HHhhhhhhhhhhccCCCCCeeece
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------A--IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------~--~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                      .|+++|++++.+++.++.|+++.||++++|+| +.+.++.             +  ++++++.+..++. .+...+++++
T Consensus       155 ~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~a~~~~~~l~-~~~~~~~~~~  232 (239)
T PRK07666        155 AYSASKFGVLGLTESLMQEVRKHNIRVTALTP-STVATDMAVDLGLTDGNPDKVMQPEDLAEFIVAQLK-LNKRTFIKSA  232 (239)
T ss_pred             chHHHHHHHHHHHHHHHHHhhccCcEEEEEec-CcccCcchhhccccccCCCCCCCHHHHHHHHHHHHh-CCCceEEEEE
Confidence            69999999999999999999999999999999 7666541             1  7899999988743 2345556555


Q ss_pred             eEE
Q 025252          247 NLL  249 (255)
Q Consensus       247 ~i~  249 (255)
                      -+|
T Consensus       233 ~~~  235 (239)
T PRK07666        233 GLW  235 (239)
T ss_pred             EEe
Confidence            444

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=1.2e-29  Score=208.84  Aligned_cols=217  Identities=23%  Similarity=0.299  Sum_probs=177.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++|||++++||.++++.|+++|++|++++|+++..+++.++... .++.++++|++++++++++++++.+.+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999999999998877666554432 36788999999999999999999888889


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|.+|++++....   ...  ...+++++++++|+.+++++.+.++|.+++  .++++++||.....   .+.   .+..
T Consensus        82 id~ii~~ag~~~~---~~~--~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~---~~~---~~~~  148 (238)
T PRK05786         82 IDGLVVTVGGYVE---DTV--EEFSGLEEMLTNHIKIPLYAVNASLRFLKE--GSSIVLVSSMSGIY---KAS---PDQL  148 (238)
T ss_pred             CCEEEEcCCCcCC---Cch--HHHHHHHHHHHHhchHHHHHHHHHHHHHhc--CCEEEEEecchhcc---cCC---CCch
Confidence            9999998654321   122  234889999999999999999999999853  47888888543211   011   1225


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------Hh--HHhhhhhhhhhhccCCCCCeee
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------EA--IASIANAALYNMAKDDDTSYVG  244 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~~--~~~~~~~~~~l~~~~~~~~~~~  244 (255)
                      .|++||++++.+++.++.++.+.||++++++| +.+.++               ++  +++++..+.++  +++...+++
T Consensus       149 ~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~--~~~~~~~~~  225 (238)
T PRK05786        149 SYAVAKAGLAKAVEILASELLGRGIRVNGIAP-TTISGDFEPERNWKKLRKLGDDMAPPEDFAKVIIWL--LTDEADWVD  225 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CccCCCCCchhhhhhhccccCCCCCHHHHHHHHHHH--hcccccCcc
Confidence            69999999999999999999999999999999 666543               12  78999999999  778888899


Q ss_pred             ceeEEecCCcC
Q 025252          245 KQNLLVNGGFR  255 (255)
Q Consensus       245 G~~i~~dgG~~  255 (255)
                      |+.+.+|||.+
T Consensus       226 g~~~~~~~~~~  236 (238)
T PRK05786        226 GVVIPVDGGAR  236 (238)
T ss_pred             CCEEEECCccc
Confidence            99999999975

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=213.68  Aligned_cols=184  Identities=26%  Similarity=0.382  Sum_probs=157.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |.+|+++||||+++||++++++|+++|++|++++|+.+.++++.+... ..+..+++|++++++++++++++.+.++++|
T Consensus         1 ~~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          1 MMEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYG-DRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcc-CCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999999999999999999999999999887776665543 4678889999999999999999999889999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||||...   ..++.+.+.+++++++++|+.+++.+++.++|.|++++.++||++||...    ..+.+..   ..|
T Consensus        80 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~----~~~~~~~---~~Y  149 (275)
T PRK08263         80 IVVNNAGYGL---FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGG----ISAFPMS---GIY  149 (275)
T ss_pred             EEEECCCCcc---ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh----cCCCCCc---cHH
Confidence            9999987653   24567789999999999999999999999999998777789999995433    2222222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      ++||++++.+++.++.|+++.||+|++++| +.+.|
T Consensus       150 ~~sKaa~~~~~~~la~e~~~~gi~v~~v~P-g~~~t  184 (275)
T PRK08263        150 HASKWALEGMSEALAQEVAEFGIKVTLVEP-GGYST  184 (275)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEec-CCccC
Confidence            999999999999999999999999999999 65543

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.8e-29  Score=211.93  Aligned_cols=183  Identities=24%  Similarity=0.338  Sum_probs=157.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+..++..+++.  ..++.++++|++++++++++++++.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            479999999999999999999999999999999887776665543  246888999999999999999999998899999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +|||||....   ..+.+.+.+++++++++|+.+++.+++.++|.|++++.++|+++||..+    ..+.+..   ..|+
T Consensus        81 lI~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~----~~~~~~~---~~Y~  150 (270)
T PRK05650         81 IVNNAGVASG---GFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAG----LMQGPAM---SSYN  150 (270)
T ss_pred             EEECCCCCCC---CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhh----cCCCCCc---hHHH
Confidence            9999876542   4567788999999999999999999999999998777789999995532    2233323   6799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ++|++++++++.++.|+.+.||+|++|+| +.++|+
T Consensus       151 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~  185 (270)
T PRK05650        151 VAKAGVVALSETLLVELADDEIGVHVVCP-SFFQTN  185 (270)
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEec-CccccC
Confidence            99999999999999999999999999999 777665

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.97  E-value=3.7e-29  Score=206.69  Aligned_cols=218  Identities=28%  Similarity=0.432  Sum_probs=179.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++||||+++||++++++|+++|++|++..|+... .+.+.+...  ..++.++.+|++++++++++++++.+.++
T Consensus         4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~   83 (249)
T PRK12825          4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFG   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcC
Confidence            567899999999999999999999999998886665443 333333322  24688999999999999999999988888


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||+|+...   ...+.+.+.+++++.+++|+.+++++++.++|++++.+.++++++||.+..    .+..   +.
T Consensus        84 ~id~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~----~~~~---~~  153 (249)
T PRK12825         84 RIDILVNNAGIFE---DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGL----PGWP---GR  153 (249)
T ss_pred             CCCEEEECCccCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccC----CCCC---Cc
Confidence            9999999987543   244556788999999999999999999999999987778899999965432    2222   22


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------------------h--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------------------A--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------------------~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+.+|++++++++.+++++.+.|++++++.| +.+.++.                    +  ++|++..+.++  .++
T Consensus       154 ~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~--~~~  230 (249)
T PRK12825        154 SNYAAAKAGLVGLTKALARELAEYGITVNMVAP-GDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAVAFL--CSD  230 (249)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE-CCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHHHHH--hCc
Confidence            569999999999999999999999999999999 6665541                    1  58999999999  777


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      ...+++|+++.++||.
T Consensus       231 ~~~~~~g~~~~i~~g~  246 (249)
T PRK12825        231 ASDYITGQVIEVTGGV  246 (249)
T ss_pred             cccCcCCCEEEeCCCE
Confidence            7789999999999995

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.1e-29  Score=215.10  Aligned_cols=221  Identities=23%  Similarity=0.287  Sum_probs=177.1

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      -..+++.+++++|||+++|||+++|+.|+.+|++|++.+|+.+..++..+++.    ..++.++++|+++.++++++.++
T Consensus        28 ~~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~  107 (314)
T KOG1208|consen   28 THGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE  107 (314)
T ss_pred             eccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence            34466889999999999999999999999999999999999887777766664    36788999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc--
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI--  172 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~--  172 (255)
                      +++.++++|++|||||....+     ...+.|.+|..|.+|+.|++.+++.++|.|+++..+|||++||.........  
T Consensus       108 ~~~~~~~ldvLInNAGV~~~~-----~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~  182 (314)
T KOG1208|consen  108 FKKKEGPLDVLINNAGVMAPP-----FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKD  182 (314)
T ss_pred             HHhcCCCccEEEeCcccccCC-----cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhh
Confidence            999999999999999876532     2567889999999999999999999999999887799999997654110000  


Q ss_pred             -cC-cC--CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---H---------------h---HHhhh
Q 025252          173 -EG-LC--NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---E---------------A---IASIA  227 (255)
Q Consensus       173 -~~-~~--~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---~---------------~---~~~~~  227 (255)
                       .. ..  +.....|+.||.+...+++.|++.+.. ||.+++++| |.+.+.   +               +   ++.-+
T Consensus       183 l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hP-G~v~t~~l~r~~~~~~~l~~~l~~~~~ks~~~ga  260 (314)
T KOG1208|consen  183 LSGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHP-GVVKTTGLSRVNLLLRLLAKKLSWPLTKSPEQGA  260 (314)
T ss_pred             ccchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECC-CcccccceecchHHHHHHHHHHHHHhccCHHHHh
Confidence             00 00  222235999999999999999999988 999999999 766665   1               1   56667


Q ss_pred             hhhhhhhccCCCCCeeecee
Q 025252          228 NAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~  247 (255)
                      ++.++.. .+++-..++|..
T Consensus       261 ~t~~~~a-~~p~~~~~sg~y  279 (314)
T KOG1208|consen  261 ATTCYAA-LSPELEGVSGKY  279 (314)
T ss_pred             hheehhc-cCccccCccccc
Confidence            7777662 345445555554

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.8e-29  Score=205.70  Aligned_cols=198  Identities=17%  Similarity=0.178  Sum_probs=166.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.    ..++.++++|++++++++++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6889999999999999999999999999999999887766655443    346888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||....   ..+.+.+.+.+++.+++|+.+++.+++.++|.+++.+.++|+++||..+..    +.+.  +..
T Consensus        82 id~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~----~~~~--~~~  152 (248)
T PRK08251         82 LDRVIVNAGIGKG---ARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVR----GLPG--VKA  152 (248)
T ss_pred             CCEEEECCCcCCC---CCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEecccccc----CCCC--Ccc
Confidence            9999999876542   345566788999999999999999999999999877788999999654321    2111  125


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------h-HHhhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------A-IASIANAALYN  233 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------~-~~~~~~~~~~l  233 (255)
                      .|+.||++++++++.++.|+...||+|++|+| +.++|+.          + +++.+..++..
T Consensus       153 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~a~~i~~~  214 (248)
T PRK08251        153 AYAASKAGVASLGEGLRAELAKTPIKVSTIEP-GYIRSEMNAKAKSTPFMVDTETGVKALVKA  214 (248)
T ss_pred             cHHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CcCcchhhhccccCCccCCHHHHHHHHHHH
Confidence            69999999999999999999999999999999 8777751          1 78888887766

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.97  E-value=3.6e-29  Score=215.30  Aligned_cols=192  Identities=22%  Similarity=0.201  Sum_probs=155.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|+++.++++++++++.+.++
T Consensus         3 ~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   82 (322)
T PRK07453          3 QDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGK   82 (322)
T ss_pred             CCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            3578999999999999999999999999999999999887777766653  24688899999999999999999877778


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC--CcEEEeccCCCccc---ccc---
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR--GCILYTTGTGTTAC---TEI---  172 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~is~~~~~~~---~~~---  172 (255)
                      ++|++|||||.....  ....+.+.++++.++++|+.+++++++.++|.|++++.  ++||++||......   +..   
T Consensus        83 ~iD~li~nAg~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         83 PLDALVCNAAVYMPL--LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CccEEEECCcccCCC--CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            899999998764311  12335688999999999999999999999999987653  69999997643210   000   


Q ss_pred             ----------------------cCcCCCCCcccccchHHHHHHHHHHHHHhc-ccCcEEeEeccCcch
Q 025252          173 ----------------------EGLCNIPANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVSHTYGL  217 (255)
Q Consensus       173 ----------------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~p~~~~  217 (255)
                                            ......|...|+.||.+.+.+++.+++++. .+||+|++++| |.+
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~P-G~v  227 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYP-GCV  227 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecC-Ccc
Confidence                                  001223457899999999999999999995 47999999999 555

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-29  Score=205.95  Aligned_cols=201  Identities=24%  Similarity=0.343  Sum_probs=163.1

Q ss_pred             EEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           30 IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        30 lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      +||||++|||++++++|+++|++|++++|+.+..++..++++ ..++.++.+|++++++++++++++    +++|++|||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA----GPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc----CCCCEEEEC
Confidence            599999999999999999999999999999777666655553 246888999999999998888753    789999999


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchH
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKF  188 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKa  188 (255)
                      ++....   .++.+.+.+++++++++|+.+++++++  .+.+  ++.++|+++||..+    ..+.+.   ...|++||+
T Consensus        77 ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~--~~~g~iv~~ss~~~----~~~~~~---~~~Y~~sK~  142 (230)
T PRK07041         77 AADTPG---GPVRALPLAAAQAAMDSKFWGAYRVAR--AARI--APGGSLTFVSGFAA----VRPSAS---GVLQGAINA  142 (230)
T ss_pred             CCCCCC---CChhhCCHHHHHHHHHHHHHHHHHHHh--hhhh--cCCeEEEEECchhh----cCCCCc---chHHHHHHH
Confidence            876432   355677899999999999999999999  4444  34689999995543    222222   267999999


Q ss_pred             HHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------H---h--HHhhhhhhhhhhccCCCCCe
Q 025252          189 GILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------E---A--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       189 a~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~---~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      +++++++.++.|+.+  |||++++| +.++|+                     +   +  |+|+++.+.++  +++  .+
T Consensus       143 a~~~~~~~la~e~~~--irv~~i~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~--~~  215 (230)
T PRK07041        143 ALEALARGLALELAP--VRVNTVSP-GLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFL--AAN--GF  215 (230)
T ss_pred             HHHHHHHHHHHHhhC--ceEEEEee-cccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hcC--CC
Confidence            999999999999975  99999999 665543                     0   1  78999999998  653  58


Q ss_pred             eeceeEEecCCcC
Q 025252          243 VGKQNLLVNGGFR  255 (255)
Q Consensus       243 ~~G~~i~~dgG~~  255 (255)
                      ++|+++.+|||.+
T Consensus       216 ~~G~~~~v~gg~~  228 (230)
T PRK07041        216 TTGSTVLVDGGHA  228 (230)
T ss_pred             cCCcEEEeCCCee
Confidence            9999999999963

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-28  Score=207.42  Aligned_cols=200  Identities=21%  Similarity=0.311  Sum_probs=165.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+|+++||||+++||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4567899999999999999999999999999999998776666554442  24678889999999999999999988889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+....   ....+.+.+.+++.+++|+.+++++++.++|.+.+++.++|+++||...    ..+.+.   .
T Consensus        87 ~id~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~----~~~~~~---~  156 (274)
T PRK07775         87 EIEVLVSGAGDTYF---GKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA----LRQRPH---M  156 (274)
T ss_pred             CCCEEEECCCcCCC---cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh----cCCCCC---c
Confidence            99999999876542   3455678899999999999999999999999997777789999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAALY  232 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~~~  232 (255)
                      ..|+++|++++++++.++.++.+.||++++++| |.++++                          .+  ++|++.++++
T Consensus       157 ~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~p-G~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~  235 (274)
T PRK07775        157 GAYGAAKAGLEAMVTNLQMELEGTGVRASIVHP-GPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITF  235 (274)
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEeC-CcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHH
Confidence            569999999999999999999999999999999 554332                          12  8899999988


Q ss_pred             h
Q 025252          233 N  233 (255)
Q Consensus       233 l  233 (255)
                      +
T Consensus       236 ~  236 (274)
T PRK07775        236 V  236 (274)
T ss_pred             H
Confidence            8

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.97  E-value=4.4e-29  Score=200.41  Aligned_cols=184  Identities=19%  Similarity=0.245  Sum_probs=153.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++|||+++|||++++++|+++ ++|++++|+..               .+++|+++++++++++++    .+++|++||
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~---------------~~~~D~~~~~~~~~~~~~----~~~id~lv~   61 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG---------------DVQVDITDPASIRALFEK----VGKVDAVVS   61 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC---------------ceEecCCChHHHHHHHHh----cCCCCEEEE
Confidence            6999999999999999999999 99999998753               368999999999888775    378999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccch
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK  187 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asK  187 (255)
                      |||...   ..++.+.+.++|++.+++|+.+++++++.+.|+|+  +.++|+++||..+    ..+.++.   ..|++||
T Consensus        62 ~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~iss~~~----~~~~~~~---~~Y~~sK  129 (199)
T PRK07578         62 AAGKVH---FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN--DGGSFTLTSGILS----DEPIPGG---ASAATVN  129 (199)
T ss_pred             CCCCCC---CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCeEEEEccccc----CCCCCCc---hHHHHHH
Confidence            987543   24566788999999999999999999999999995  3478999985432    2222222   6699999


Q ss_pred             HHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----H-------h-HHhhhhhhhhhhccCCCCCeeeceeEEe
Q 025252          188 FGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----E-------A-IASIANAALYNMAKDDDTSYVGKQNLLV  250 (255)
Q Consensus       188 aa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----~-------~-~~~~~~~~~~l~~~~~~~~~~~G~~i~~  250 (255)
                      ++++++++.++.|+ ++||+||+|+| +.++|+     +       . ++|+++.+..+  ++   ...+|+++.+
T Consensus       130 ~a~~~~~~~la~e~-~~gi~v~~i~P-g~v~t~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~---~~~~g~~~~~  198 (199)
T PRK07578        130 GALEGFVKAAALEL-PRGIRINVVSP-TVLTESLEKYGPFFPGFEPVPAARVALAYVRS--VE---GAQTGEVYKV  198 (199)
T ss_pred             HHHHHHHHHHHHHc-cCCeEEEEEcC-CcccCchhhhhhcCCCCCCCCHHHHHHHHHHH--hc---cceeeEEecc
Confidence            99999999999999 88999999999 777665     1       1 78999988877  53   3689998876

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.9e-29  Score=208.62  Aligned_cols=180  Identities=22%  Similarity=0.352  Sum_probs=154.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .|+++||||+++||++++++|+++|++|++++|+++..+++.+..+ .++.++++|++|.++++++++++.+.++++|++
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYG-DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVV   80 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4789999999999999999999999999999999877776665543 468899999999999999999998888999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      |||||....   .+..+.+.+++++.+++|+.+++++++.++|+|++++.++||++||.++.    .+.+   +.+.|++
T Consensus        81 i~~ag~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~---~~~~Y~~  150 (276)
T PRK06482         81 VSNAGYGLF---GAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQ----IAYP---GFSLYHA  150 (276)
T ss_pred             EECCCCCCC---cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc----cCCC---CCchhHH
Confidence            999876542   34566788999999999999999999999999987778899999965422    2222   2367999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      ||++++++++.++.+++++||+++.+.| +.+
T Consensus       151 sK~a~~~~~~~l~~~~~~~gi~v~~v~p-g~~  181 (276)
T PRK06482        151 TKWGIEGFVEAVAQEVAPFGIEFTIVEP-GPA  181 (276)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEeC-Ccc
Confidence            9999999999999999999999999999 544

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.3e-29  Score=209.06  Aligned_cols=178  Identities=24%  Similarity=0.291  Sum_probs=151.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+...++.+    .++.++.+|+++.++++++++++.+.++++|++|
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi   77 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVLI   77 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            689999999999999999999999999999998776555433    2467889999999999999999999889999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||||...   ..+..+.+.+++++.+++|+.+++.+++.++|.|++ ..++|+++||..+    ..+.+..   ..|++|
T Consensus        78 ~~ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~~g~iv~isS~~~----~~~~~~~---~~Y~~s  146 (274)
T PRK05693         78 NNAGYGA---MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRR-SRGLVVNIGSVSG----VLVTPFA---GAYCAS  146 (274)
T ss_pred             ECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh-cCCEEEEECCccc----cCCCCCc---cHHHHH
Confidence            9987643   245667899999999999999999999999999964 4588999996543    2222222   569999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      |++++.+++.++.|++++||+|++++| +.++|+
T Consensus       147 K~al~~~~~~l~~e~~~~gi~v~~v~p-g~v~t~  179 (274)
T PRK05693        147 KAAVHALSDALRLELAPFGVQVMEVQP-GAIASQ  179 (274)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEec-Cccccc
Confidence            999999999999999999999999999 777654

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=6.5e-30  Score=198.38  Aligned_cols=181  Identities=25%  Similarity=0.305  Sum_probs=155.4

Q ss_pred             cCeEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH-HcCCc
Q 025252           25 QGRVAIITGGA-SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA-KFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas-~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~i  102 (255)
                      ..|+++|||++ ||||.++++.|+++|+.|++++|..+....+..+.   +..+..+|+++++++..+..++++ .+|++
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~---gl~~~kLDV~~~~~V~~v~~evr~~~~Gkl   82 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF---GLKPYKLDVSKPEEVVTVSGEVRANPDGKL   82 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh---CCeeEEeccCChHHHHHHHHHHhhCCCCce
Confidence            45678888776 69999999999999999999999988877776553   588899999999999999999998 67999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+|+||||...   ..+..+.+.++.++.|++|++|.+.++|++...+ -+.+|.|+|+.|    .....+++-.   +.
T Consensus        83 d~L~NNAG~~C---~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~l-ikaKGtIVnvgS----l~~~vpfpf~---~i  151 (289)
T KOG1209|consen   83 DLLYNNAGQSC---TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFL-IKAKGTIVNVGS----LAGVVPFPFG---SI  151 (289)
T ss_pred             EEEEcCCCCCc---ccccccCCHHHHHhhhccceeeeehHHHHHHHHH-HHccceEEEecc----eeEEeccchh---hh
Confidence            99999987554   3567788999999999999999999999999665 456899999994    4333444433   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      |++||||+.+|++.|.-|+++.||+|..+.| |++.|.
T Consensus       152 YsAsKAAihay~~tLrlEl~PFgv~Vin~it-GGv~T~  188 (289)
T KOG1209|consen  152 YSASKAAIHAYARTLRLELKPFGVRVINAIT-GGVATD  188 (289)
T ss_pred             hhHHHHHHHHhhhhcEEeeeccccEEEEecc-cceecc
Confidence            9999999999999999999999999999999 777775

>PRK09135 pteridine reductase; Provisional

Probab=99.97  E-value=2.5e-28  Score=202.09  Aligned_cols=215  Identities=29%  Similarity=0.372  Sum_probs=171.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++++|||++++||++++++|+++|++|++++|+. +..+++.+.+.   ...+.++.+|+++.+++.++++++.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999864 33344333332   2358889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||+|+....   .++.+.+.++++.++++|+.+++.+.+++.|++.++ .+.++++++..    ...+   ..|
T Consensus        84 ~~~d~vi~~ag~~~~---~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~~~~~~~~----~~~~---~~~  152 (249)
T PRK09135         84 GRLDALVNNASSFYP---TPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ-RGAIVNITDIH----AERP---LKG  152 (249)
T ss_pred             CCCCEEEECCCCCCC---CChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC-CeEEEEEeChh----hcCC---CCC
Confidence            999999999875432   344566788999999999999999999999998654 46777776322    1112   233


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l~~~  236 (255)
                      ...|++||++++.+++.++.++.+ +++++++.| +.+.++                  +   .  ++|+++++.++  +
T Consensus       153 ~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~~v~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~--~  228 (249)
T PRK09135        153 YPVYCAAKAALEMLTRSLALELAP-EVRVNAVAP-GAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVRFL--L  228 (249)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHCC-CCeEEEEEe-ccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHHHH--c
Confidence            477999999999999999999865 799999999 666553                  0   1  78899998877  5


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      .+ ....+|+++.+++|.
T Consensus       229 ~~-~~~~~g~~~~i~~g~  245 (249)
T PRK09135        229 AD-ASFITGQILAVDGGR  245 (249)
T ss_pred             Cc-cccccCcEEEECCCe
Confidence            44 456899999999985

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-28  Score=201.80  Aligned_cols=193  Identities=19%  Similarity=0.175  Sum_probs=161.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||++|||++++++|+++|++|++++|+++..++..+++.   ..++.++++|++++++++++++++.+   .+|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            689999999999999999999999999999999877666554432   24788999999999999999988754   579


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||+|....   ....+.+.+++++.+++|+.+++++++.+.|.|.+++.++++++||..+    ..+.+..   ..|
T Consensus        79 ~vv~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~~---~~Y  148 (243)
T PRK07102         79 IVLIAVGTLGD---QAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAG----DRGRASN---YVY  148 (243)
T ss_pred             EEEECCcCCCC---cccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccc----cCCCCCC---ccc
Confidence            99999875432   3456778999999999999999999999999998878899999995532    2222222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------h--HHhhhhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------A--IASIANAALYN  233 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------~--~~~~~~~~~~l  233 (255)
                      +++|++++++++.++.|+.+.||+|++|+| +.++|+.          +  ++++++.+...
T Consensus       149 ~~sK~a~~~~~~~l~~el~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~a~~i~~~  209 (243)
T PRK07102        149 GSAKAALTAFLSGLRNRLFKSGVHVLTVKP-GFVRTPMTAGLKLPGPLTAQPEEVAKDIFRA  209 (243)
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEec-CcccChhhhccCCCccccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999 7777661          1  88999988877

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.6e-28  Score=200.80  Aligned_cols=182  Identities=19%  Similarity=0.215  Sum_probs=148.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++|||+++|||++++++|+++|++|++++|+++..+++.+ .  .++.++.+|++|+++++++++++.+  +++|++|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-~--~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~vi   76 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA-L--PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLLF   76 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh-c--cccceEEcCCCCHHHHHHHHHHhhc--CCCCEEE
Confidence            679999999999999999999999999999999876655433 2  3577889999999999999988754  4799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||||..... ..++.+.+.+++++.+++|+.+++.+++.++|.+++ +.++++++||..+..    +.....+...|+++
T Consensus        77 ~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~ss~~g~~----~~~~~~~~~~Y~~s  150 (225)
T PRK08177         77 VNAGISGPA-HQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRP-GQGVLAFMSSQLGSV----ELPDGGEMPLYKAS  150 (225)
T ss_pred             EcCcccCCC-CCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhh-cCCEEEEEccCcccc----ccCCCCCccchHHH
Confidence            998765322 144567889999999999999999999999999864 347888888543221    11111122469999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      |++++.+++.++.|++++||+||+|+| |.++|+
T Consensus       151 K~a~~~~~~~l~~e~~~~~i~v~~i~P-G~i~t~  183 (225)
T PRK08177        151 KAALNSMTRSFVAELGEPTLTVLSMHP-GWVKTD  183 (225)
T ss_pred             HHHHHHHHHHHHHHhhcCCeEEEEEcC-CceecC
Confidence            999999999999999999999999999 888886

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.96  E-value=5.5e-28  Score=198.84  Aligned_cols=213  Identities=28%  Similarity=0.419  Sum_probs=174.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++|||++++||+.++++|+++|++|++++|+. +...+..+.+.  ..++.++.+|++|+++++++++++.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 33333333332  2357889999999999999999999888999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      ||+++....   ....+.+.+++++.+++|+.+++.+++.+.+.+.+++.++++++||.+..    .+.+.   ...|++
T Consensus        81 i~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~----~g~~~---~~~y~~  150 (239)
T TIGR01830        81 VNNAGITRD---NLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL----MGNAG---QANYAA  150 (239)
T ss_pred             EECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc----CCCCC---CchhHH
Confidence            999775432   33456788999999999999999999999999877677899999964322    22222   266999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------------------h--HHhhhhhhhhhhccCCCCCee
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------------------A--IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------------------~--~~~~~~~~~~l~~~~~~~~~~  243 (255)
                      +|++++.+++.++.++...|++++.+.| +.++++.                    +  +++++..++++  +++...+.
T Consensus       151 ~k~a~~~~~~~l~~~~~~~g~~~~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~  227 (239)
T TIGR01830       151 SKAGVIGFTKSLAKELASRNITVNAVAP-GFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFL--ASDEASYI  227 (239)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEE-CCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHH--hCcccCCc
Confidence            9999999999999999999999999999 6665430                    1  67888888888  66667789


Q ss_pred             eceeEEecCCc
Q 025252          244 GKQNLLVNGGF  254 (255)
Q Consensus       244 ~G~~i~~dgG~  254 (255)
                      +|+.+++|+|+
T Consensus       228 ~g~~~~~~~g~  238 (239)
T TIGR01830       228 TGQVIHVDGGM  238 (239)
T ss_pred             CCCEEEeCCCc
Confidence            99999999996

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=198.52  Aligned_cols=210  Identities=28%  Similarity=0.379  Sum_probs=172.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +.+++++||||+++||++++++|+++|++|++++|+++...++.+++.. .++.++.+|+++.++++++++++.+.++++
T Consensus         4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   83 (237)
T PRK07326          4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL   83 (237)
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5689999999999999999999999999999999998777777666543 468889999999999999999999988999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||+++...   ..++.+.+.+++++++++|+.+++.+++++++.+ +++.++|+++||....    .+..   +...
T Consensus        84 d~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~----~~~~---~~~~  152 (237)
T PRK07326         84 DVLIANAGVGH---FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL-KRGGGYIINISSLAGT----NFFA---GGAA  152 (237)
T ss_pred             CEEEECCCCCC---CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH-HHCCeEEEEECChhhc----cCCC---CCch
Confidence            99999976543   2456678899999999999999999999999998 4456889999854321    1222   2256


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------H-----h-HHhhhhhhhhhhccCCCCCeeecee
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------E-----A-IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------~-----~-~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      |+++|++++++++.++.|+++.|++++++.| +.+.++       +     . +++++..+.++  +......+.++.
T Consensus       153 y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~d~a~~~~~~--l~~~~~~~~~~~  227 (237)
T PRK07326        153 YNASKFGLVGFSEAAMLDLRQYGIKVSTIMP-GSVATHFNGHTPSEKDAWKIQPEDIAQLVLDL--LKMPPRTLPSKI  227 (237)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEee-ccccCcccccccchhhhccCCHHHHHHHHHHH--HhCCccccccce
Confidence            9999999999999999999999999999999 655443       1     1 78899999988  555555555543

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.2e-28  Score=229.01  Aligned_cols=200  Identities=23%  Similarity=0.254  Sum_probs=168.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ..++.++.+|++|.++++++++++.+.+|
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            5789999999999999999999999999999999999887777665553  24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCC--CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILD--TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++|++|||||....   ..+.+  .+.+++++++++|+.+++++++.++|.|++++.++|+++||.++.    .+.+.. 
T Consensus       448 ~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~----~~~~~~-  519 (657)
T PRK07201        448 HVDYLVNNAGRSIR---RSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQ----TNAPRF-  519 (657)
T ss_pred             CCCEEEECCCCCCC---CChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhc----CCCCCc-
Confidence            99999999876432   12221  235789999999999999999999999988888999999965432    222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------------h-HHhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------------A-IASIANAALYN  233 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------------~-~~~~~~~~~~l  233 (255)
                        +.|++||++++++++.++.|++++||+|++|+| +.++|+.            + |++++..++..
T Consensus       520 --~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~p-g~v~T~~~~~~~~~~~~~~~~~~~~a~~i~~~  584 (657)
T PRK07201        520 --SAYVASKAALDAFSDVAASETLSDGITFTTIHM-PLVRTPMIAPTKRYNNVPTISPEEAADMVVRA  584 (657)
T ss_pred             --chHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEC-CcCcccccCccccccCCCCCCHHHHHHHHHHH
Confidence              569999999999999999999999999999999 8887761            1 88888888775

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.96  E-value=2e-28  Score=190.91  Aligned_cols=161  Identities=32%  Similarity=0.489  Sum_probs=138.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC--cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ--DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..+++.++++  ..++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            7899999999999999999999965 77888888  555666655543  368899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||+|...   ..++.+.+.++|++++++|+.+++++.+.++|    ++.++|+++||    ..+..+.+..   .
T Consensus        81 ld~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~~g~iv~~sS----~~~~~~~~~~---~  146 (167)
T PF00106_consen   81 LDILINNAGIFS---DGSLDDLSEEELERVFRVNLFGPFLLAKALLP----QGGGKIVNISS----IAGVRGSPGM---S  146 (167)
T ss_dssp             ESEEEEECSCTT---SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HTTEEEEEEEE----GGGTSSSTTB---H
T ss_pred             cccccccccccc---ccccccccchhhhhccccccceeeeeeehhee----ccccceEEecc----hhhccCCCCC---h
Confidence            999999987765   36677789999999999999999999999999    45899999994    4444444444   6


Q ss_pred             ccccchHHHHHHHHHHHHHh
Q 025252          182 YYGVSKFGILGLVKSLAAEL  201 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~  201 (255)
                      .|++||+|+++|++++++|+
T Consensus       147 ~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen  147 AYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHhc
Confidence            79999999999999999996

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.8e-27  Score=198.96  Aligned_cols=196  Identities=28%  Similarity=0.365  Sum_probs=162.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++++||||+++||+++++.|+++|++|++++|++...++..+++.  ..++.++.+|++|+++++++++++.+.++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999999999776666555443  24688899999999999999999998889999


Q ss_pred             EEEEcCCCccccCccCCCCC-ChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDT-PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++|||++....   ..+.+. +.+++++.+++|+.+++.+++.++|++.++ .++++++||....    .+.++   ...
T Consensus        81 ~vi~~ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~~~iv~~sS~~~~----~~~~~---~~~  149 (263)
T PRK06181         81 ILVNNAGITMW---SRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS-RGQIVVVSSLAGL----TGVPT---RSG  149 (263)
T ss_pred             EEEECCCcccc---cchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCEEEEEeccccc----CCCCC---ccH
Confidence            99999876542   345556 889999999999999999999999998644 5789988854432    22222   266


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l  233 (255)
                      |+++|++++++++.++.++.+++|+++++.| +.+.|+                     ++  ++|++..+.++
T Consensus       150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~  222 (263)
T PRK06181        150 YAASKHALHGFFDSLRIELADDGVAVTVVCP-GFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILPA  222 (263)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCceEEEEec-CccccCcchhhccccccccccccccccCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999 654332                     12  89999999888

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1e-27  Score=197.94  Aligned_cols=189  Identities=17%  Similarity=0.184  Sum_probs=153.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||++|||++++++|+++|++|++++|+++..+++.++.  .++.++.+|+++.++++++++++..   .+|.+|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~i   76 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQS--ANIFTLAFDVTDHPGTKAALSQLPF---IPELWI   76 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc--CCCeEEEeeCCCHHHHHHHHHhccc---CCCEEE
Confidence            67999999999999999999999999999999987776665542  3688899999999999999887642   579999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      |||+....   ....+.+.+++++++++|+.+++++++.+.|.|.  ++++++++||..+    ..+.+..   ..|++|
T Consensus        77 ~~ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~iv~isS~~~----~~~~~~~---~~Y~as  144 (240)
T PRK06101         77 FNAGDCEY---MDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS--CGHRVVIVGSIAS----ELALPRA---EAYGAS  144 (240)
T ss_pred             EcCccccc---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh--cCCeEEEEechhh----ccCCCCC---chhhHH
Confidence            99764321   2334568899999999999999999999999984  3467888885432    2222222   569999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------H-h--HHhhhhhhhhh
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------E-A--IASIANAALYN  233 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------~-~--~~~~~~~~~~l  233 (255)
                      |++++++++.++.|++++||+|+++.| +.+.|+         + .  +++++..+...
T Consensus       145 K~a~~~~~~~l~~e~~~~gi~v~~v~p-g~i~t~~~~~~~~~~~~~~~~~~~a~~i~~~  202 (240)
T PRK06101        145 KAAVAYFARTLQLDLRPKGIEVVTVFP-GFVATPLTDKNTFAMPMIITVEQASQEIRAQ  202 (240)
T ss_pred             HHHHHHHHHHHHHHHHhcCceEEEEeC-CcCCCCCcCCCCCCCCcccCHHHHHHHHHHH
Confidence            999999999999999999999999999 777765         1 1  78888888765

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.96  E-value=1.7e-27  Score=196.83  Aligned_cols=179  Identities=16%  Similarity=0.187  Sum_probs=145.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHH-HHHHc---CCc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDT-TVAKF---GKL  102 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~i  102 (255)
                      ++++||||++|||++++++|+++|++|++++|+.+..  .... ...++.++++|+++.+++++++++ +.+.+   +++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~   78 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--LAAA-AGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASR   78 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--hhhc-cCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCc
Confidence            3699999999999999999999999999999986532  2221 224688899999999999998877 55544   479


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||++....  ..+..+.+.+++++.+++|+.+++.+++.+++.|.+++.++|+++||...    ..+.++   ...
T Consensus        79 ~~~v~~ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~---~~~  149 (243)
T PRK07023         79 VLLINNAGTVEP--IGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA----RNAYAG---WSV  149 (243)
T ss_pred             eEEEEcCcccCC--CCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh----cCCCCC---chH
Confidence            999999875432  23556778999999999999999999999999998777789999995432    222222   267


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      |+++|++++++++.++.+ .+.||++++|+| +.++|
T Consensus       150 Y~~sK~a~~~~~~~~~~~-~~~~i~v~~v~p-g~~~t  184 (243)
T PRK07023        150 YCATKAALDHHARAVALD-ANRALRIVSLAP-GVVDT  184 (243)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCCcEEEEecC-Ccccc
Confidence            999999999999999999 888999999999 66654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.95  E-value=5.1e-28  Score=198.87  Aligned_cols=186  Identities=26%  Similarity=0.265  Sum_probs=155.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .|+-++|||||.|||++.|++||++|.+|++++|+++++....+++.+   -++..+.+|+++.+..-+.+.+..+. ..
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~-~~  126 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG-LD  126 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC-Cc
Confidence            457799999999999999999999999999999999999888887754   35888999999987632222222221 25


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |.+||||+|..... ...+.+.+.+++++.+.+|..+...+++.++|.|.++++|.|+|++    +..+..+.+..   +
T Consensus       127 VgILVNNvG~~~~~-P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~Ivnig----S~ag~~p~p~~---s  198 (312)
T KOG1014|consen  127 VGILVNNVGMSYDY-PESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIG----SFAGLIPTPLL---S  198 (312)
T ss_pred             eEEEEecccccCCC-cHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEec----cccccccChhH---H
Confidence            67899998766532 3667778888999999999999999999999999999999999999    54445555555   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      .|++||+.++.|+++|..|++.+||-|-++.| +.+.|.
T Consensus       199 ~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p-~~VaTk  236 (312)
T KOG1014|consen  199 VYSASKAFVDFFSRCLQKEYESKGIFVQSVIP-YLVATK  236 (312)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeh-hheecc
Confidence            79999999999999999999999999999999 888775

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.5e-26  Score=188.74  Aligned_cols=210  Identities=13%  Similarity=0.093  Sum_probs=164.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++|||++++||++++++|+++|++|++++|+.+..+++..    ..+.++.+|+++.++++++++++..  +++|++|
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~vi   75 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA----LGAEALALDVADPASVAGLAWKLDG--EALDAAV   75 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh----ccceEEEecCCCHHHHHHHHHHhcC--CCCCEEE
Confidence            579999999999999999999999999999998776655443    2456889999999999998776632  4799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||++..... .....+.+.+++++++++|+.+++.++++++|+|++ ..++++++||..+..    +.....+...|+++
T Consensus        76 ~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~g~iv~isS~~~~~----~~~~~~~~~~Y~~s  149 (222)
T PRK06953         76 YVAGVYGPR-TEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEA-AGGVLAVLSSRMGSI----GDATGTTGWLYRAS  149 (222)
T ss_pred             ECCCcccCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhc-cCCeEEEEcCccccc----ccccCCCccccHHh
Confidence            998754221 134456789999999999999999999999999865 467899988553221    11111111359999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h-HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A-IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~-~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      |++++++++.++.++  .+++|++|+| +.++|+.      + +++.+..++..  +.+...-.+|+++..|++
T Consensus       150 K~a~~~~~~~~~~~~--~~i~v~~v~P-g~i~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  218 (222)
T PRK06953        150 KAALNDALRAASLQA--RHATCIALHP-GWVRTDMGGAQAALDPAQSVAGMRRV--IAQATRRDNGRFFQYDGV  218 (222)
T ss_pred             HHHHHHHHHHHhhhc--cCcEEEEECC-CeeecCCCCCCCCCCHHHHHHHHHHH--HHhcCcccCceEEeeCCc
Confidence            999999999999986  4799999999 8888862      2 77778877776  444456888999988875

>PRK08264 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.6e-26  Score=190.30  Aligned_cols=193  Identities=23%  Similarity=0.247  Sum_probs=159.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +.+.+|+++||||+++||++++++|+++|+ +|++++|+.+...+     ...++.++.+|++|+++++++++.    ++
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~----~~   72 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-----LGPRVVPLQLDVTDPASVAAAAEA----AS   72 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-----cCCceEEEEecCCCHHHHHHHHHh----cC
Confidence            346889999999999999999999999999 99999998765543     224788999999999998887765    36


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||+++...  ....+.+.+.+++++.+++|+.+++.+.+++.|.+++++.++++++||...    ..+..+   .
T Consensus        73 ~id~vi~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~----~~~~~~---~  143 (238)
T PRK08264         73 DVTILVNNAGIFR--TGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS----WVNFPN---L  143 (238)
T ss_pred             CCCEEEECCCcCC--CCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh----ccCCCC---c
Confidence            8999999987632  124567789999999999999999999999999998777889999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------h-HHhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------A-IASIANAALYN  233 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------~-~~~~~~~~~~l  233 (255)
                      ..|+++|++++++++.++.++++.|++++++.| +.++++.        . +++++..++..
T Consensus       144 ~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~p-g~v~t~~~~~~~~~~~~~~~~a~~~~~~  204 (238)
T PRK08264        144 GTYSASKAAAWSLTQALRAELAPQGTRVLGVHP-GPIDTDMAAGLDAPKASPADVARQILDA  204 (238)
T ss_pred             hHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeC-CcccccccccCCcCCCCHHHHHHHHHHH
Confidence            569999999999999999999999999999999 7776661        1 78888888766

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.95  E-value=1.2e-27  Score=197.69  Aligned_cols=185  Identities=22%  Similarity=0.240  Sum_probs=148.3

Q ss_pred             HHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCC
Q 025252           42 AAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL  121 (255)
Q Consensus        42 ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~  121 (255)
                      ++++|+++|++|++++|+++...         ...++++|++|.++++++++++.   +++|++|||||...        
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~---------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~--------   60 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT---------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG--------   60 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh---------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC--------
Confidence            47899999999999999876532         12357899999999999988763   68999999987542        


Q ss_pred             CCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc--------------------CcCCCCCc
Q 025252          122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE--------------------GLCNIPAN  181 (255)
Q Consensus       122 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~--------------------~~~~~~~~  181 (255)
                         .+.+++++++|+.+++++++.++|.|.+  .|+||++||..+.......                    ..+..+..
T Consensus        61 ---~~~~~~~~~vN~~~~~~l~~~~~~~~~~--~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  135 (241)
T PRK12428         61 ---TAPVELVARVNFLGLRHLTEALLPRMAP--GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALAT  135 (241)
T ss_pred             ---CCCHHHhhhhchHHHHHHHHHHHHhccC--CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCccc
Confidence               1357899999999999999999999853  4899999976543211000                    00112236


Q ss_pred             ccccchHHHHHHHHHHH-HHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          182 YYGVSKFGILGLVKSLA-AELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la-~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      .|++||++++++++.++ .|++++|||||+|+| |.+.|+                      ++  |+|+++++.++  +
T Consensus       136 ~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l--~  212 (241)
T PRK12428        136 GYQLSKEALILWTMRQAQPWFGARGIRVNCVAP-GPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFL--C  212 (241)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhccCeEEEEeec-CCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHH--c
Confidence            79999999999999999 999999999999999 666554                      12  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++.+.+++|+.+.+|||+
T Consensus       213 s~~~~~~~G~~i~vdgg~  230 (241)
T PRK12428        213 SDAARWINGVNLPVDGGL  230 (241)
T ss_pred             ChhhcCccCcEEEecCch
Confidence            888899999999999996

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-26  Score=191.89  Aligned_cols=177  Identities=22%  Similarity=0.312  Sum_probs=146.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+..+++.+...  ..++.++.+|++|+++++++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999998776666554432  2358889999999998877643      4899


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++||||+...   ..+..+.+.++++..+++|+.+++.+.+.++|.+.+++.++||++||..+.    ...+..   ..|
T Consensus        76 ~vi~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~----~~~~~~---~~Y  145 (257)
T PRK09291         76 VLLNNAGIGE---AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGL----ITGPFT---GAY  145 (257)
T ss_pred             EEEECCCcCC---CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhc----cCCCCc---chh
Confidence            9999987654   246677899999999999999999999999999987777899999965322    222222   569


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      ++||++++++++.++.++.+.||++++|+| +.+.|
T Consensus       146 ~~sK~a~~~~~~~l~~~~~~~gi~~~~v~p-g~~~t  180 (257)
T PRK09291        146 CASKHALEAIAEAMHAELKPFGIQVATVNP-GPYLT  180 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcEEEEEec-Ccccc
Confidence            999999999999999999999999999999 66544

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.95  E-value=2.2e-26  Score=188.96  Aligned_cols=198  Identities=27%  Similarity=0.311  Sum_probs=173.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +.++|||+++|||+++++....+|++|.++.|+.+++.++++.++.    ..+.+..+|++|.++...+++++.+..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            6799999999999999999999999999999999999998888753    235678899999999999999999989999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |.++||||..-.   +.+.+++.++++..+++|+.++++++++.++.|+++. .|+|+.+|    +..+..+..++   +
T Consensus       114 d~l~~cAG~~v~---g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vs----S~~a~~~i~Gy---s  183 (331)
T KOG1210|consen  114 DNLFCCAGVAVP---GLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVS----SQLAMLGIYGY---S  183 (331)
T ss_pred             ceEEEecCcccc---cccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEeh----hhhhhcCcccc---c
Confidence            999999876642   5678899999999999999999999999999998776 57999999    55556666666   8


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------------------hHHhhhhhhhhhhc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------------------AIASIANAALYNMA  235 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------------------~~~~~~~~~~~l~~  235 (255)
                      +|+++|+|+.++...+++|+.++||+|....| ..+.||-                      .+|+++.+++--|+
T Consensus       184 aYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P-~~~~tpGfE~En~tkP~~t~ii~g~ss~~~~e~~a~~~~~~~~  258 (331)
T KOG1210|consen  184 AYSPSKFALRGLAEALRQELIKYGVHVTLYYP-PDTLTPGFERENKTKPEETKIIEGGSSVIKCEEMAKAIVKGMK  258 (331)
T ss_pred             ccccHHHHHHHHHHHHHHHHhhcceEEEEEcC-CCCCCCccccccccCchheeeecCCCCCcCHHHHHHHHHhHHh
Confidence            89999999999999999999999999999999 8777760                      17888887775543

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.95  E-value=3e-26  Score=189.65  Aligned_cols=191  Identities=16%  Similarity=0.122  Sum_probs=141.3

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ..+..+++|+++||||++|||++++++|+++|++|++++|+.....+.  ... .....+.+|+++.+++++       .
T Consensus         7 ~~~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~--~~~-~~~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367          7 MAQSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES--NDE-SPNEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             hhHHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh--hcc-CCCeEEEeeCCCHHHHHH-------h
Confidence            345678999999999999999999999999999999999986322111  111 123578899999987653       3


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC---CCCcEEEeccCCCcccccccCc
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      ++++|++|||||...      ..+.+.+++++++++|+.+++++++.++|.|.++   +++.+++.||.+.    ..+ +
T Consensus        77 ~~~iDilVnnAG~~~------~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~----~~~-~  145 (245)
T PRK12367         77 LASLDVLILNHGINP------GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE----IQP-A  145 (245)
T ss_pred             cCCCCEEEECCccCC------cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc----cCC-C
Confidence            468999999987542      2345789999999999999999999999999653   2233433343221    111 1


Q ss_pred             CCCCCcccccchHHHHHHH---HHHHHHhcccCcEEeEeccCcchhhhH-----h-HHhhhhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLV---KSLAAELGRYGIRVDCVSHTYGLAMAE-----A-IASIANAALYNM  234 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~---~~la~e~~~~gi~v~~v~p~~~~~t~~-----~-~~~~~~~~~~l~  234 (255)
                      .   ...|++||+|+..+.   +.++.|+.+.|++|+++.| +.++|+.     + |+++++.+++.+
T Consensus       146 ~---~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~p-g~~~t~~~~~~~~~~~~vA~~i~~~~  209 (245)
T PRK12367        146 L---SPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLIL-GPFRSELNPIGIMSADFVAKQILDQA  209 (245)
T ss_pred             C---CchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecC-CCcccccCccCCCCHHHHHHHHHHHH
Confidence            1   256999999986544   4555566788999999999 7777651     2 899999988884

>PRK08017 oxidoreductase; Provisional

Probab=99.95  E-value=1.6e-25  Score=186.22  Aligned_cols=193  Identities=20%  Similarity=0.217  Sum_probs=159.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~  104 (255)
                      .|+++|||++++||+++++.|+++|++|++++|+.+..+.+.+    .++..+.+|+++.++++++++.+.+.. +++|.
T Consensus         2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            3689999999999999999999999999999998876655432    247788999999999999999887754 68999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +|||++...   ..+..+.+.+++++++++|+.+++++++.++|.+++.+.++|+++||..+    ..+.+.   ...|+
T Consensus        78 ii~~ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~----~~~~~~---~~~Y~  147 (256)
T PRK08017         78 LFNNAGFGV---YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMG----LISTPG---RGAYA  147 (256)
T ss_pred             EEECCCCCC---ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCccc----ccCCCC---ccHHH
Confidence            999987543   24566778999999999999999999999999998877789999996432    222222   26799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------H--h-HHhhhhhhhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------E--A-IASIANAALYN  233 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~--~-~~~~~~~~~~l  233 (255)
                      +||++++.+++.++.++.+.+++++++.| +.+.|+                     +  . ++|++..+..+
T Consensus       148 ~sK~~~~~~~~~l~~~~~~~~i~v~~v~p-g~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~  219 (256)
T PRK08017        148 ASKYALEAWSDALRMELRHSGIKVSLIEP-GPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHA  219 (256)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCEEEEEeC-CCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999 555432                     0  1 78888888877

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.93  E-value=8.9e-24  Score=172.50  Aligned_cols=188  Identities=19%  Similarity=0.262  Sum_probs=151.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .|+++||||+++||+++++.|+++ ++|++++|+.+..+++.++.  ..+.++++|++|.++++++++++    +++|++
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~----~~id~v   75 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL--PGATPFPVDLTDPEAIAAAVEQL----GRLDVL   75 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh--ccceEEecCCCCHHHHHHHHHhc----CCCCEE
Confidence            578999999999999999999999 99999999877665555443  25788999999999988877653    579999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      ||+++...   ..+..+.+.+++.+++++|+.+++.+.+.+++.++++ .++++++||..+    ..+.++.   ..|++
T Consensus        76 i~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~----~~~~~~~---~~y~~  144 (227)
T PRK08219         76 VHNAGVAD---LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAG----LRANPGW---GSYAA  144 (227)
T ss_pred             EECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHh----cCcCCCC---chHHH
Confidence            99976543   2345667889999999999999999999999998655 578999885432    2222222   56999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------Hh--HHhhhhhhhhh
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------EA--IASIANAALYN  233 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~~--~~~~~~~~~~l  233 (255)
                      +|++++.+++.++.++... ++++++.| +.++++                ++  ++|++..+.++
T Consensus       145 ~K~a~~~~~~~~~~~~~~~-i~~~~i~p-g~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  208 (227)
T PRK08219        145 SKFALRALADALREEEPGN-VRVTSVHP-GRTDTDMQRGLVAQEGGEYDPERYLRPETVAKAVRFA  208 (227)
T ss_pred             HHHHHHHHHHHHHHHhcCC-ceEEEEec-CCccchHhhhhhhhhccccCCCCCCCHHHHHHHHHHH
Confidence            9999999999999988776 99999999 555443                11  89999999988

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.92  E-value=2e-25  Score=175.22  Aligned_cols=213  Identities=16%  Similarity=0.131  Sum_probs=165.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH--HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+|++++||+|.|||..++..+.+++.+.....++....  +.+..... +....+..|++...-+.+.++..++..|+.
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            567899999999999999999988887665544443322  22222222 344556678888888899999888888999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |++|||||..+.......+..+.++|++.++.|+++.+.+.+.++|.+++++ .+.++|+|    +...-.+....   +
T Consensus        84 ~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvS----S~aav~p~~~w---a  156 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVS----SLAAVRPFSSW---A  156 (253)
T ss_pred             eEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEec----chhhhccccHH---H
Confidence            9999999988765544455789999999999999999999999999998775 78999999    55554455444   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAALYN  233 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~~~l  233 (255)
                      +||.+|+|.++|.+.||-|-. ++++|.+++| |.+||+                          ++  |...+..+..|
T Consensus       157 ~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aP-GvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L  234 (253)
T KOG1204|consen  157 AYCSSKAARNMYFMVLASEEP-FDVRVLNYAP-GVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKL  234 (253)
T ss_pred             HhhhhHHHHHHHHHHHhhcCc-cceeEEEccC-CcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHH
Confidence            799999999999999999966 8999999999 999997                          11  56666666666


Q ss_pred             hccCCCCCeeeceeEEe
Q 025252          234 MAKDDDTSYVGKQNLLV  250 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~  250 (255)
                      ...   ..+++|+++..
T Consensus       235 ~e~---~~f~sG~~vdy  248 (253)
T KOG1204|consen  235 LEK---GDFVSGQHVDY  248 (253)
T ss_pred             HHh---cCccccccccc
Confidence            222   22889987653

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.92  E-value=1.9e-23  Score=183.15  Aligned_cols=186  Identities=18%  Similarity=0.153  Sum_probs=138.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++...+..... ...+..+.+|++|.+++++.       +++
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~-~~~v~~v~~Dvsd~~~v~~~-------l~~  245 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE-DLPVKTLHWQVGQEAALAEL-------LEK  245 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc-CCCeEEEEeeCCCHHHHHHH-------hCC
Confidence            3468999999999999999999999999999999999876554333221 13467889999999877554       358


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC----CcEEEeccCCCcccccccCcCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR----GCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|||||...      ..+.+.+++++++++|+.+++.+++.++|.|++++.    +.++++|+..     . ..+. 
T Consensus       246 IDiLInnAGi~~------~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-----~-~~~~-  312 (406)
T PRK07424        246 VDILIINHGINV------HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-----V-NPAF-  312 (406)
T ss_pred             CCEEEECCCcCC------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-----c-cCCC-
Confidence            999999987543      135688999999999999999999999999976542    3456665311     1 1111 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--H---h-HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--E---A-IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--~---~-~~~~~~~~~~l~  234 (255)
                        ...|++||+|+.+++. +.++.  .++.|..+.| +.+.|+  +   + ||++|+.+++.+
T Consensus       313 --~~~Y~ASKaAl~~l~~-l~~~~--~~~~I~~i~~-gp~~t~~~~~~~~spe~vA~~il~~i  369 (406)
T PRK07424        313 --SPLYELSKRALGDLVT-LRRLD--APCVVRKLIL-GPFKSNLNPIGVMSADWVAKQILKLA  369 (406)
T ss_pred             --chHHHHHHHHHHHHHH-HHHhC--CCCceEEEEe-CCCcCCCCcCCCCCHHHHHHHHHHHH
Confidence              1459999999999984 44443  3566666777 555553  1   2 899999999884

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=5.5e-22  Score=158.06  Aligned_cols=194  Identities=18%  Similarity=0.193  Sum_probs=155.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCE-----EEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAK-----VVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~-----v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~   92 (255)
                      |..|+++|||+++|||.+++++|++...+     +.+++|+-++.++.+.++..      .++.++..|+++..++.++.
T Consensus         1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~   80 (341)
T KOG1478|consen    1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRAS   80 (341)
T ss_pred             CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHH
Confidence            46799999999999999999999997543     66789999999988877642      36888999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCcc------------------------CCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFV------------------------SILDTPKSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~------------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                      +++.++|.++|.+..|||....++..                        .....+.|++..+|++||+|++++.+.+.|
T Consensus        81 ~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~p  160 (341)
T KOG1478|consen   81 KDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEP  160 (341)
T ss_pred             HHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhh
Confidence            99999999999999988766544322                        222457889999999999999999999999


Q ss_pred             HhcCCCCCcEEEeccCCCccccc--ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          149 VMVPRRRGCILYTTGTGTTACTE--IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       149 ~l~~~~~~~ii~is~~~~~~~~~--~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      ++-.++...+|.+||..+-....  ..........+|+.||.+.+-+.-++.+.+.+.|+.-++++||..+
T Consensus       161 ll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~t  231 (341)
T KOG1478|consen  161 LLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFT  231 (341)
T ss_pred             HhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceee
Confidence            99888888999999543211100  0001111225699999999999999999999999999999994443

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.88  E-value=1.7e-21  Score=167.80  Aligned_cols=166  Identities=16%  Similarity=0.187  Sum_probs=130.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||+|+||++++++|+++|  ++|++.+|+.....++...+...++.++.+|++|++++.++++       +
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------~   74 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALR-------G   74 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------c
Confidence            468999999999999999999999986  7899999876655444444443468899999999999887765       5


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||+|+....    +.   .....++++++|+.++.++++++.+.    +.++||++||..    .      ..|.+
T Consensus        75 iD~Vih~Ag~~~~----~~---~~~~~~~~~~~Nv~g~~~ll~aa~~~----~~~~iV~~SS~~----~------~~p~~  133 (324)
T TIGR03589        75 VDYVVHAAALKQV----PA---AEYNPFECIRTNINGAQNVIDAAIDN----GVKRVVALSTDK----A------ANPIN  133 (324)
T ss_pred             CCEEEECcccCCC----ch---hhcCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEeCCC----C------CCCCC
Confidence            8999999875431    11   12233578999999999999999752    446899999532    1      12336


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA  218 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~  218 (255)
                      .|++||++.+.+++.++.++++.|++++++.| +.+.
T Consensus       134 ~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~-g~v~  169 (324)
T TIGR03589       134 LYGATKLASDKLFVAANNISGSKGTRFSVVRY-GNVV  169 (324)
T ss_pred             HHHHHHHHHHHHHHHHHhhccccCcEEEEEee-ccee
Confidence            79999999999999999888889999999999 5444

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.88  E-value=2.4e-21  Score=198.45  Aligned_cols=178  Identities=14%  Similarity=0.059  Sum_probs=142.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcc--------------hH--------------------------
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDN--------------LG--------------------------   63 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~--------------~~--------------------------   63 (255)
                      ++++++||||++|||++++++|+++ |++|++++|+..              .+                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699999999820              00                          


Q ss_pred             -------HHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhh
Q 025252           64 -------QALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV  134 (255)
Q Consensus        64 -------~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~  134 (255)
                             .+..+.+.  ..++.++.||++|.++++++++++.+. ++||++|||||....   ..+.+.+.++|++++++
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~---~~i~~~t~e~f~~v~~~ 2151 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLAD---KHIQDKTLEEFNAVYGT 2151 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCC---CCcccCCHHHHHHHHHH
Confidence                   00111111  246788999999999999999999876 689999999886542   56778899999999999


Q ss_pred             hhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       135 n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      |+.+++++++++.+.+    .++|+++||..    +..+..+.   ..|+++|++++++++.++.++.  ++||++|+| 
T Consensus      2152 nv~G~~~Ll~al~~~~----~~~IV~~SSva----g~~G~~gq---s~YaaAkaaL~~la~~la~~~~--~irV~sI~w- 2217 (2582)
T TIGR02813      2152 KVDGLLSLLAALNAEN----IKLLALFSSAA----GFYGNTGQ---SDYAMSNDILNKAALQLKALNP--SAKVMSFNW- 2217 (2582)
T ss_pred             HHHHHHHHHHHHHHhC----CCeEEEEechh----hcCCCCCc---HHHHHHHHHHHHHHHHHHHHcC--CcEEEEEEC-
Confidence            9999999999987654    24699999543    33344333   6799999999999999999874  489999999 


Q ss_pred             cchhhh
Q 025252          215 YGLAMA  220 (255)
Q Consensus       215 ~~~~t~  220 (255)
                      |.++++
T Consensus      2218 G~wdtg 2223 (2582)
T TIGR02813      2218 GPWDGG 2223 (2582)
T ss_pred             CeecCC
Confidence            766665

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.87  E-value=1.2e-20  Score=164.04  Aligned_cols=176  Identities=14%  Similarity=0.085  Sum_probs=133.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++|+++||||+|+||++++++|+++|++|++++|+.....+...... ..++.++.+|+++.+++.+++++.     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            468899999999999999999999999999999988765443332222 235778899999999999988864     68


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-----cccCcCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-----EIEGLCN  177 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-----~~~~~~~  177 (255)
                      |++||+|+...       ...+.+++...+++|+.+++++++++.+.   ...+++|++||...+...     .......
T Consensus        77 d~vih~A~~~~-------~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~  146 (349)
T TIGR02622        77 EIVFHLAAQPL-------VRKSYADPLETFETNVMGTVNLLEAIRAI---GSVKAVVNVTSDKCYRNDEWVWGYRETDPL  146 (349)
T ss_pred             CEEEECCcccc-------cccchhCHHHHHHHhHHHHHHHHHHHHhc---CCCCEEEEEechhhhCCCCCCCCCccCCCC
Confidence            99999976432       23355677888999999999999987532   224689999976443321     1111123


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcc----cCcEEeEeccC
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGR----YGIRVDCVSHT  214 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~----~gi~v~~v~p~  214 (255)
                      .|.+.|+.||.+.+.+++.++.++.+    +|++++++.|+
T Consensus       147 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~  187 (349)
T TIGR02622       147 GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAG  187 (349)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccC
Confidence            45678999999999999999988755    48999999983

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.87  E-value=2e-20  Score=146.27  Aligned_cols=172  Identities=15%  Similarity=0.209  Sum_probs=132.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHH---HHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQAL---ADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~---~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |+++|||++++||++++++|+++|. .|++++|+++.....   .+++.  ..++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999996 678888875433221   12221  24677889999999999999999988889


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|.+||+++...   ..++.+.+.+++++++++|+.+++++.+.+.    +.+.++++++||..    ...+..+.   
T Consensus        81 ~id~li~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~ii~~ss~~----~~~~~~~~---  146 (180)
T smart00822       81 PLRGVIHAAGVLD---DGLLANLTPERFAAVLAPKVDGAWNLHELTR----DLPLDFFVLFSSVA----GVLGNPGQ---  146 (180)
T ss_pred             CeeEEEEccccCC---ccccccCCHHHHHHhhchHhHHHHHHHHHhc----cCCcceEEEEccHH----HhcCCCCc---
Confidence            9999999987543   2345677889999999999999999999884    33557899988543    22222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      ..|+++|++++.+++.++.    .|+++.++.| +..
T Consensus       147 ~~y~~sk~~~~~~~~~~~~----~~~~~~~~~~-g~~  178 (180)
T smart00822      147 ANYAAANAFLDALAAHRRA----RGLPATSINW-GAW  178 (180)
T ss_pred             hhhHHHHHHHHHHHHHHHh----cCCceEEEee-ccc
Confidence            5699999999998876644    6888999999 543

It uses NADPH to reduce the keto group to a hydroxy group.

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.84  E-value=2.4e-19  Score=146.42  Aligned_cols=205  Identities=17%  Similarity=0.159  Sum_probs=151.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA--KVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++|||||.|+||.++++.+.++..  +|+.++...  ...+.+.......+..++++|+.|.+.+.+++++-     .+
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            4689999999999999999999764  466666542  33444554445568999999999999999888864     79


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc------cccCcC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT------EIEGLC  176 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~------~~~~~~  176 (255)
                      |+++|.|.-       +-.+.|.+..+..+++|+.|++.+++++..+...   -+++.||.-...+..      .....+
T Consensus        76 D~VvhfAAE-------SHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~---frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          76 DAVVHFAAE-------SHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK---FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             CeEEEechh-------ccccccccChhhhhhcchHHHHHHHHHHHHhccc---ceEEEeccccccccccCCCCCcccCCC
Confidence            999997653       3367788999999999999999999999987632   578889943322221      224456


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC-----cchhhh-------------------------Hh--HH
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT-----YGLAMA-------------------------EA--IA  224 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~-----~~~~t~-------------------------~~--~~  224 (255)
                      ..|.++|+||||+.+.+++++.+.   +|+.+....+.     +..+..                         ++  .+
T Consensus       146 ~~PsSPYSASKAasD~lVray~~T---Yglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~Ve  222 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRT---YGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVE  222 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHH---cCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeH
Confidence            678899999999999999999998   56555555420     222211                         22  88


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      |-+.++..+  +.+ . .+ |++..+.||.
T Consensus       223 Dh~~ai~~V--l~k-g-~~-GE~YNIgg~~  247 (340)
T COG1088         223 DHCRAIDLV--LTK-G-KI-GETYNIGGGN  247 (340)
T ss_pred             hHHHHHHHH--Hhc-C-cC-CceEEeCCCc
Confidence            888888777  322 2 22 9999999985

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.84  E-value=1.8e-19  Score=162.08  Aligned_cols=186  Identities=13%  Similarity=0.170  Sum_probs=140.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-----------CCceEEEEeeCCCHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----------HQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      ..+|+++||||+|+||++++++|+++|++|++++|+.+....+.+++.           ..++.++.+|++|.+++++. 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            468899999999999999999999999999999999887766554321           13578999999999887653 


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                            ++++|++|||+|...    .     ...++...+.+|+.++.++++++.+.    +.++||++||.+.....  
T Consensus       157 ------LggiDiVVn~AG~~~----~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a----gVgRIV~VSSiga~~~g--  215 (576)
T PLN03209        157 ------LGNASVVICCIGASE----K-----EVFDVTGPYRIDYLATKNLVDAATVA----KVNHFILVTSLGTNKVG--  215 (576)
T ss_pred             ------hcCCCEEEEcccccc----c-----cccchhhHHHHHHHHHHHHHHHHHHh----CCCEEEEEccchhcccC--
Confidence                  358999999876432    1     12246778899999999999988643    45789999976532111  


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAA  230 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~  230 (255)
                       .    +...|. +|+++..+.+.+..++...||++++|+| +++.++                    +.  .+|+|..+
T Consensus       216 -~----p~~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRP-G~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vV  288 (576)
T PLN03209        216 -F----PAAILN-LFWGVLCWKRKAEEALIASGLPYTIVRP-GGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELM  288 (576)
T ss_pred             -c----cccchh-hHHHHHHHHHHHHHHHHHcCCCEEEEEC-CeecCCccccccccceeeccccccCCCccCHHHHHHHH
Confidence             1    111244 7888888899999999999999999999 544321                    11  78999999


Q ss_pred             hhhhccCCCC
Q 025252          231 LYNMAKDDDT  240 (255)
Q Consensus       231 ~~l~~~~~~~  240 (255)
                      +++  +++..
T Consensus       289 vfL--asd~~  296 (576)
T PLN03209        289 ACM--AKNRR  296 (576)
T ss_pred             HHH--HcCch
Confidence            998  76443

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.83  E-value=1.1e-18  Score=149.89  Aligned_cols=184  Identities=15%  Similarity=0.145  Sum_probs=127.2

Q ss_pred             cCeEEEEecCCChHHHH--HHHHHHHcCCEEEEEecCcch---------------HHHHHHHhCCCceEEEEeeCCCHHH
Q 025252           25 QGRVAIITGGASGIGAS--AAQLFHKNGAKVVIADVQDNL---------------GQALADKLGHQDVCYIHCDVSNERE   87 (255)
Q Consensus        25 ~~k~~lVtGas~giG~a--ia~~l~~~g~~v~~~~r~~~~---------------~~~~~~~~~~~~~~~~~~D~~~~~~   87 (255)
                      -+|++||||+++|||.+  +++.| +.|++++++++..+.               ..+..++.+ ..+..+.||++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G-~~a~~i~~DVss~E~  117 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAG-LYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcC-CceEEEEcCCCCHHH
Confidence            57899999999999999  89999 999999888753321               122222221 356788999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccC----------cc--------C-------------CCCCChHHHHHHHhhhh
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRG----------FV--------S-------------ILDTPKSDLERLLAVNT  136 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~----------~~--------~-------------~~~~~~~~~~~~~~~n~  136 (255)
                      ++++++++.+.+|+||+||||++......          .+        +             +...+.++++..+  ++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hh
Confidence            99999999999999999999965542211          00        1             1123344444443  34


Q ss_pred             hhH---HHHHHH--HHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEe
Q 025252          137 IGG---FLVAKH--AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV  211 (255)
Q Consensus       137 ~~~---~~l~~~--~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v  211 (255)
                      +|.   ..++++  ..+.|  .++++++..|..+    .....+.++ ...-+.+|++|++-++.|+.++++.|||+|++
T Consensus       196 Mggedw~~Wi~al~~a~ll--a~g~~~va~TY~G----~~~t~p~Y~-~g~mG~AKa~LE~~~r~La~~L~~~giran~i  268 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVL--AEGAKTVAYSYIG----PELTHPIYW-DGTIGKAKKDLDRTALALNEKLAAKGGDAYVS  268 (398)
T ss_pred             hccchHHHHHHHHHhcccc--cCCcEEEEEecCC----cceeecccC-CchHHHHHHHHHHHHHHHHHHhhhcCCEEEEE
Confidence            444   233333  33555  3568888888332    222221110 01358999999999999999999999999999


Q ss_pred             ccCcchhhh
Q 025252          212 SHTYGLAMA  220 (255)
Q Consensus       212 ~p~~~~~t~  220 (255)
                      ++ +.+.|.
T Consensus       269 ~~-g~~~T~  276 (398)
T PRK13656        269 VL-KAVVTQ  276 (398)
T ss_pred             ec-Ccccch
Confidence            99 888886

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.82  E-value=6.9e-19  Score=151.55  Aligned_cols=169  Identities=14%  Similarity=0.143  Sum_probs=125.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++|+++||||+|+||++++++|+++|++|+++.|+.....+......    ..++.++.+|++++++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            57899999999999999999999999999998888665433322211    1368889999999998887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---------
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---------  171 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---------  171 (255)
                      ++|++||+|+...       ...+.+.+...+++|+.+++++++++.+.+   +.++||++||........         
T Consensus        77 ~~d~vih~A~~~~-------~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~~~~iv~~SS~~~~~~~~~~~~~~~~~  146 (325)
T PLN02989         77 GCETVFHTASPVA-------ITVKTDPQVELINPAVNGTINVLRTCTKVS---SVKRVILTSSMAAVLAPETKLGPNDVV  146 (325)
T ss_pred             CCCEEEEeCCCCC-------CCCCCChHHHHHHHHHHHHHHHHHHHHHcC---CceEEEEecchhheecCCccCCCCCcc
Confidence            5899999987432       123445678899999999999999998754   246899999764332110         


Q ss_pred             ccCcCCC------CCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          172 IEGLCNI------PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       172 ~~~~~~~------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+.....      +.+.|+.||.+.+.+.+.++++   +|+++..+.|
T Consensus       147 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~  191 (325)
T PLN02989        147 DETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKD---NEIDLIVLNP  191 (325)
T ss_pred             CcCCCCchhHhcccccchHHHHHHHHHHHHHHHHH---cCCeEEEEcC
Confidence            0011111      1256999999999998888776   4788888877

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.81  E-value=6.6e-19  Score=152.62  Aligned_cols=179  Identities=15%  Similarity=0.041  Sum_probs=127.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-----HHHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQALADKL--GHQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-----~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++++|+++||||+|+||++++++|+++|++|++++|+...     .+.+....  ...++.++.+|++|.++++++++..
T Consensus         3 ~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~   82 (340)
T PLN02653          3 DPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDI   82 (340)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHc
Confidence            4578999999999999999999999999999999887542     22221111  1135788999999999999988865


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCccccc---
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTE---  171 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~---  171 (255)
                           .+|++||+|+....       ....+..+..+++|+.++.++++++.+...+++. .++|++||.+......   
T Consensus        83 -----~~d~Vih~A~~~~~-------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~  150 (340)
T PLN02653         83 -----KPDEVYNLAAQSHV-------AVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ  150 (340)
T ss_pred             -----CCCEEEECCcccch-------hhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC
Confidence                 68999999875431       1233455777899999999999999987643311 2677887653333211   


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcc---cCcEEeEecc
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGR---YGIRVDCVSH  213 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~---~gi~v~~v~p  213 (255)
                      .......|.+.|+.||.+.+.+++.++.++.-   .++.++.+.|
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp  195 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESP  195 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCC
Confidence            11223345678999999999999999888642   2344555555

>PRK06720 hypothetical protein; Provisional

Probab=99.81  E-value=1.5e-18  Score=135.44  Aligned_cols=139  Identities=22%  Similarity=0.390  Sum_probs=108.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||+++++.|+++|++|++++|+.+...+..+++.  .....++.+|++++++++++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            55789999999999999999999999999999999998776655555442  2356788999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-------CCCcEEEeccCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-------RRGCILYTTGTG  165 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-------~~~~ii~is~~~  165 (255)
                      |++|++|||||.....  ..+.+.+.++ ++  ..|+.+.+..++.+.+.|+++       +.|++..+|+.+
T Consensus        92 G~iDilVnnAG~~~~~--~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (169)
T PRK06720         92 SRIDMLFQNAGLYKID--SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKG  159 (169)
T ss_pred             CCCCEEEECCCcCCCC--CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccc
Confidence            9999999998765422  3344444444 44  667777788888888887654       367777777444

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.80  E-value=5.8e-18  Score=147.53  Aligned_cols=172  Identities=16%  Similarity=0.175  Sum_probs=119.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEE-EEecCcch--HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNL--GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~-~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||+|+||+++++.|+++|++++ +.++....  ...........++.++.+|++|.+++++++++.     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            5799999999999999999999998755 45554321  111111111235778899999999998887752     699


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc---C--CCCCcEEEeccCCCccccc------c
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV---P--RRRGCILYTTGTGTTACTE------I  172 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~---~--~~~~~ii~is~~~~~~~~~------~  172 (255)
                      ++||+|+...       .+.+.+.++..+++|+.++.++++++.+.+.   .  ++..+++++||........      .
T Consensus        77 ~Vih~A~~~~-------~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         77 CVMHLAAESH-------VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             EEEECCcccC-------cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            9999986542       1234566789999999999999999987642   1  1235889998764433111      1


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +.....|.+.|+.||.+.+.+++.+++++   ++++..+.|
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~  187 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNC  187 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEee
Confidence            11223456789999999999999998874   444444443

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.79  E-value=1.4e-17  Score=149.00  Aligned_cols=177  Identities=15%  Similarity=0.126  Sum_probs=126.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc---h--------------HHHHH--HHhCCCceEEEEeeC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN---L--------------GQALA--DKLGHQDVCYIHCDV   82 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~---~--------------~~~~~--~~~~~~~~~~~~~D~   82 (255)
                      -++++|+++||||+|+||++++++|+++|++|+++++...   .              ...+.  .+....++.++.+|+
T Consensus        43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl  122 (442)
T PLN02572         43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDI  122 (442)
T ss_pred             ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCC
Confidence            3578899999999999999999999999999999874311   0              01111  011123688999999


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           83 SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        83 ~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      +|.+.+++++++.     ++|++||+|+...    ......+.++++..+++|+.+++++++++...-   .+.+++++|
T Consensus       123 ~d~~~v~~~l~~~-----~~D~ViHlAa~~~----~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~g---v~~~~V~~S  190 (442)
T PLN02572        123 CDFEFLSEAFKSF-----EPDAVVHFGEQRS----APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFA---PDCHLVKLG  190 (442)
T ss_pred             CCHHHHHHHHHhC-----CCCEEEECCCccc----ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhC---CCccEEEEe
Confidence            9999998888864     7999999875432    122233455677889999999999999987542   124788888


Q ss_pred             cCCCccccccc--------------C---cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          163 GTGTTACTEIE--------------G---LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       163 ~~~~~~~~~~~--------------~---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |...++....+              .   ....|.+.|+.||.+.+.+.+.+++.   +|+++.++.|
T Consensus       191 S~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~  255 (442)
T PLN02572        191 TMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQ  255 (442)
T ss_pred             cceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEec
Confidence            77554321100              0   12345578999999999988877765   5777777766

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.79  E-value=5.8e-18  Score=146.95  Aligned_cols=162  Identities=12%  Similarity=0.070  Sum_probs=117.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-----HHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     ...+.+...   ..++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            589999999999999999999999999999987542     222211111   135889999999999998888864   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~  174 (255)
                        ++|++||+|+....       ..+.+.....+++|+.++.++++++.+.-. .+..+++++||...++..    ....
T Consensus        78 --~~d~ViH~Aa~~~~-------~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~  147 (343)
T TIGR01472        78 --KPTEIYNLAAQSHV-------KVSFEIPEYTADVDGIGTLRLLEAVRTLGL-IKSVKFYQASTSELYGKVQEIPQNET  147 (343)
T ss_pred             --CCCEEEECCccccc-------chhhhChHHHHHHHHHHHHHHHHHHHHhCC-CcCeeEEEeccHHhhCCCCCCCCCCC
Confidence              68999999865431       112233456778899999999999986421 122478898876443321    1112


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAEL  201 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~  201 (255)
                      .+..|.+.|+.||.+.+.+++.+++++
T Consensus       148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~  174 (343)
T TIGR01472       148 TPFYPRSPYAAAKLYAHWITVNYREAY  174 (343)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            233466889999999999999998875

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.78  E-value=1.3e-17  Score=143.56  Aligned_cols=172  Identities=14%  Similarity=0.147  Sum_probs=123.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..+|+++||||+|+||++++++|+++|++|+++.|+....+.......    ..++.++.+|++++++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            457899999999999999999999999999988888665433322211    2468889999999998887776      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---cC--
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EG--  174 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~~--  174 (255)
                       ++|++||+|+....    .    ..+...+++++|+.++.++++++.+.   .+-++||++||.+.......   +.  
T Consensus        77 -~~d~vih~A~~~~~----~----~~~~~~~~~~~nv~gt~~ll~~~~~~---~~v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 -GCDAVFHTASPVFF----T----VKDPQTELIDPALKGTINVLNTCKET---PSVKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             -CCCEEEEeCCCcCC----C----CCCchhhhhHHHHHHHHHHHHHHHhc---CCccEEEEecchhheecCCccCCCCCC
Confidence             58999999764321    0    11233567899999999999987642   23468999997653211110   00  


Q ss_pred             -----cCC-----CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          175 -----LCN-----IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       175 -----~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                           +..     .+.+.|++||.+.+.+++.+.++   +|+++.++.| +.+
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~~~~~~~lrp-~~v  193 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKD---NGIDMVVLNP-GFI  193 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHH---hCCeEEEEcc-cce
Confidence                 000     12367999999999988887765   4889999988 443

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.78  E-value=2e-17  Score=143.85  Aligned_cols=175  Identities=16%  Similarity=0.095  Sum_probs=123.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH----HHHHhC---CCceEEEEeeCCCHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA----LADKLG---HQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~----~~~~~~---~~~~~~~~~D~~~~~~~~~   90 (255)
                      +...+.+++|+++||||+|.||..++++|.++|++|++++|.......    ......   ..++.++.+|++|.+++.+
T Consensus         7 ~~~~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~   86 (348)
T PRK15181          7 LRTKLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQK   86 (348)
T ss_pred             hhhcccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHH
Confidence            345567888999999999999999999999999999999986543221    111111   1357889999999988777


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT  170 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~  170 (255)
                      +++       .+|++||.|+....       ..+.++.+..+++|+.++.++++++..    .+-.++|++||.......
T Consensus        87 ~~~-------~~d~ViHlAa~~~~-------~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~v~~SS~~vyg~~  148 (348)
T PRK15181         87 ACK-------NVDYVLHQAALGSV-------PRSLKDPIATNSANIDGFLNMLTAARD----AHVSSFTYAASSSTYGDH  148 (348)
T ss_pred             Hhh-------CCCEEEECccccCc-------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeechHhhCCC
Confidence            665       58999998764321       112234456789999999999998854    234579999976544321


Q ss_pred             c----ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          171 E----IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       171 ~----~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .    .......|.+.|+.||.+.+.+.+.++.+   +|+++..+.|
T Consensus       149 ~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~  192 (348)
T PRK15181        149 PDLPKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRY  192 (348)
T ss_pred             CCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence            1    11112245678999999999988887665   4666666665

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.77  E-value=3.1e-17  Score=142.80  Aligned_cols=164  Identities=18%  Similarity=0.198  Sum_probs=115.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCE-EEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAK-VVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +++||||+|+||++++++|+++|++ |+.+++..  .............++.++.+|++|.+++++++++.     ++|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCE
Confidence            5999999999999999999999976 44455432  12222221111245778899999999998888753     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-----CCCcEEEeccCCCccccc--------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-----RRGCILYTTGTGTTACTE--------  171 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~is~~~~~~~~~--------  171 (255)
                      +||+|+....       +.+.+..+..+++|+.++.++++++.+++++.     +..++|++||........        
T Consensus        77 vih~A~~~~~-------~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         77 VMHLAAESHV-------DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             EEECCcccCC-------cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            9999865421       11223446789999999999999998876421     234789898764443210        


Q ss_pred             ------ccCcCCCCCcccccchHHHHHHHHHHHHHhcc
Q 025252          172 ------IEGLCNIPANYYGVSKFGILGLVKSLAAELGR  203 (255)
Q Consensus       172 ------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  203 (255)
                            .......|.+.|+.||.+.+.+++.+++++.-
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~  187 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGL  187 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCC
Confidence                  01123356678999999999999999887543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.77  E-value=3.7e-17  Score=142.43  Aligned_cols=174  Identities=17%  Similarity=0.161  Sum_probs=124.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++||||+|+||++++++|+++|++|++++|+.+....+...+. ..++.++.+|+++.++++++++       ++|
T Consensus         9 ~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------~~d   81 (353)
T PLN02896          9 ATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------GCD   81 (353)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------CCC
Confidence            57789999999999999999999999999999988765555444432 2468889999999998877764       589


Q ss_pred             EEEEcCCCccccCccCCCCCChHHH--HHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc--------cc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDL--ERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE--------IE  173 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~--------~~  173 (255)
                      ++||+|+.....  ......+.+++  .++++.|+.++.++++++.+..   +.++++++||........        ..
T Consensus        82 ~Vih~A~~~~~~--~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~~~~~v~~SS~~vyg~~~~~~~~~~~~~  156 (353)
T PLN02896         82 GVFHVAASMEFD--VSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---TVKRVVFTSSISTLTAKDSNGRWRAVVD  156 (353)
T ss_pred             EEEECCccccCC--ccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---CccEEEEEechhhccccccCCCCCCccC
Confidence            999998755421  10111223332  4677888899999999987642   246899998765443111        00


Q ss_pred             C----c------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          174 G----L------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       174 ~----~------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .    +      ...+.+.|+.||.+.+.+++.++++   +|+++.++.|
T Consensus       157 E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~  203 (353)
T PLN02896        157 ETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKE---NGIDLVSVIT  203 (353)
T ss_pred             cccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHH---cCCeEEEEcC
Confidence            0    0      0112347999999999999888776   4788888876

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.77  E-value=3.2e-17  Score=142.00  Aligned_cols=169  Identities=15%  Similarity=0.143  Sum_probs=121.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH--HHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA--DKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~--~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++||||+|+||++++++|+++|++|+++.|+........  ..+.. .++.++.+|++|++++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            56889999999999999999999999999998888765433222  11221 357889999999998877665       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-------cc
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-------IE  173 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-------~~  173 (255)
                      ++|++||+|+...      ..  ..+.....+++|+.++.++++++.+.   .+.++++++||........       ..
T Consensus        80 ~~d~vih~A~~~~------~~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~~~~~v~~SS~~~~g~~~~~~~~~~~~  148 (338)
T PLN00198         80 GCDLVFHVATPVN------FA--SEDPENDMIKPAIQGVHNVLKACAKA---KSVKRVILTSSAAAVSINKLSGTGLVMN  148 (338)
T ss_pred             cCCEEEEeCCCCc------cC--CCChHHHHHHHHHHHHHHHHHHHHhc---CCccEEEEeecceeeeccCCCCCCceec
Confidence            5899999986322      11  12334567899999999999998753   2346899999765432110       00


Q ss_pred             C----------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          174 G----------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       174 ~----------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .          ....|.+.|+.||.+.+.+++.++.+   +|+++..+.|
T Consensus       149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~  195 (338)
T PLN00198        149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIP  195 (338)
T ss_pred             cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeC
Confidence            0          01234567999999999998888776   5788888776

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.77  E-value=5e-17  Score=138.95  Aligned_cols=168  Identities=18%  Similarity=0.191  Sum_probs=119.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++||||+|+||++++++|++.|  ++|++.+|...  ..+.+.......++.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            38999999999999999999987  78888876421  1112221112236788999999999998887753     699


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-----cccCcCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-----EIEGLCNI  178 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-----~~~~~~~~  178 (255)
                      ++||+|+...       .+.+.+.++..+++|+.++.++++++.+..   .+.+++++||.......     ........
T Consensus        76 ~vi~~a~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~  145 (317)
T TIGR01181        76 AVVHFAAESH-------VDRSISGPAAFIETNVVGTYTLLEAVRKYW---HEFRFHHISTDEVYGDLEKGDAFTETTPLA  145 (317)
T ss_pred             EEEEcccccC-------chhhhhCHHHHHHHHHHHHHHHHHHHHhcC---CCceEEEeeccceeCCCCCCCCcCCCCCCC
Confidence            9999876433       123445677889999999999999887653   23469999875432211     11112223


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |...|+.+|++.+.+++.++.+   .++++.++.|
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~i~R~  177 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRT---YGLPALITRC  177 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEe
Confidence            4567999999999999988776   4677777776

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02650 dihydroflavonol-4-reductase

Probab=99.77  E-value=2.6e-17  Score=143.27  Aligned_cols=168  Identities=16%  Similarity=0.131  Sum_probs=121.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ..|+++||||+|+||++++++|+++|++|++++|+.....+......    ..++.++.+|+++.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            56789999999999999999999999999999988665444333221    1257889999999998887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----ccCc
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----IEGL  175 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~~~~  175 (255)
                      .+|++||+|+....      .  ..+..+..+++|+.++.++++++.+..   ..++||++||.+......     ....
T Consensus        77 ~~d~ViH~A~~~~~------~--~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~~~r~v~~SS~~~~~~~~~~~~~~~E~  145 (351)
T PLN02650         77 GCTGVFHVATPMDF------E--SKDPENEVIKPTVNGMLSIMKACAKAK---TVRRIVFTSSAGTVNVEEHQKPVYDED  145 (351)
T ss_pred             CCCEEEEeCCCCCC------C--CCCchhhhhhHHHHHHHHHHHHHHhcC---CceEEEEecchhhcccCCCCCCccCcc
Confidence            58999998754321      1  112235778999999999999997642   135799998764322110     0000


Q ss_pred             ----------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 ----------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                                ...|.+.|+.||.+.+.+++.++++   +|++++.+.|
T Consensus       146 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp  190 (351)
T PLN02650        146 CWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIP  190 (351)
T ss_pred             cCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECC
Confidence                      0112357999999999999888876   6889999887

>PLN02583 cinnamoyl-CoA reductase

Probab=99.76  E-value=6e-17  Score=137.92  Aligned_cols=173  Identities=12%  Similarity=0.017  Sum_probs=121.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch--HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL--GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~--~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      -.+|+++||||+|+||++++++|+++|++|+++.|+...  ..+....+.  ..++.++.+|++|.+++.+++.      
T Consensus         4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~------   77 (297)
T PLN02583          4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK------   77 (297)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc------
Confidence            357899999999999999999999999999999886432  222222221  2368889999999998876654      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-c-c----c
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-E-I----E  173 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-~-~----~  173 (255)
                       ..|.++|.++...        +. ...++.++++|+.+++++++++.+.+   +.++||++||.+..... . .    .
T Consensus        78 -~~d~v~~~~~~~~--------~~-~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~riV~~SS~~a~~~~~~~~~~~~~  144 (297)
T PLN02583         78 -GCSGLFCCFDPPS--------DY-PSYDEKMVDVEVRAAHNVLEACAQTD---TIEKVVFTSSLTAVIWRDDNISTQKD  144 (297)
T ss_pred             -CCCEEEEeCccCC--------cc-cccHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEecchHheecccccCCCCCC
Confidence             6788887542211        11 12467899999999999999998754   24689999976543211 0 0    0


Q ss_pred             CcCCC---------CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          174 GLCNI---------PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       174 ~~~~~---------~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      .....         +...|+.||...+.+...++++   +|+++++++| +.+..
T Consensus       145 ~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp-~~v~G  195 (297)
T PLN02583        145 VDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINA-GLLMG  195 (297)
T ss_pred             CCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcC-CcccC
Confidence            00000         0125999999999988877665   5899999999 54433

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.75  E-value=1e-16  Score=141.73  Aligned_cols=164  Identities=18%  Similarity=0.226  Sum_probs=132.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++||+++||||+|.||.++++++++.+ .++++.++++.+.-....++..    .+..++.+|+.|.+.++.++++.   
T Consensus       248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~---  324 (588)
T COG1086         248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH---  324 (588)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC---
Confidence            789999999999999999999999987 5788999998877766666543    67889999999999999998864   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                        ++|+++|+|+.-.       .+.-...+.+.+.+|+.|+.++++++...    +-.+++.+|    +      .....
T Consensus       325 --kvd~VfHAAA~KH-------VPl~E~nP~Eai~tNV~GT~nv~~aa~~~----~V~~~V~iS----T------DKAV~  381 (588)
T COG1086         325 --KVDIVFHAAALKH-------VPLVEYNPEEAIKTNVLGTENVAEAAIKN----GVKKFVLIS----T------DKAVN  381 (588)
T ss_pred             --CCceEEEhhhhcc-------CcchhcCHHHHHHHhhHhHHHHHHHHHHh----CCCEEEEEe----c------CcccC
Confidence              7999999875433       23445567788999999999999999754    456788888    3      22334


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |.+.|++||...+.++.+++.+.+..+-++.+|.=
T Consensus       382 PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRF  416 (588)
T COG1086         382 PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRF  416 (588)
T ss_pred             CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEe
Confidence            55889999999999999999987765666666653

>PLN02214 cinnamoyl-CoA reductase

Probab=99.74  E-value=1.1e-16  Score=138.96  Aligned_cols=164  Identities=15%  Similarity=0.199  Sum_probs=120.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH-HHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL-ADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~-~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++|+++||||+|+||++++++|+++|++|++++|+.+..... ...+.  ..++.++.+|++++++++++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            4678999999999999999999999999999999976542221 12221  1357889999999998887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCC-Cccccc------cc
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTG-TTACTE------IE  173 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~-~~~~~~------~~  173 (255)
                      ++|++||+|+...            +++++.+++|+.++.++++++.+.    +.+++|++||.+ ......      ..
T Consensus        81 ~~d~Vih~A~~~~------------~~~~~~~~~nv~gt~~ll~aa~~~----~v~r~V~~SS~~avyg~~~~~~~~~~~  144 (342)
T PLN02214         81 GCDGVFHTASPVT------------DDPEQMVEPAVNGAKFVINAAAEA----KVKRVVITSSIGAVYMDPNRDPEAVVD  144 (342)
T ss_pred             cCCEEEEecCCCC------------CCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeccceeeeccCCCCCCcccC
Confidence            5899999876321            235678999999999999998652    345899999753 221110      00


Q ss_pred             Cc-------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          174 GL-------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       174 ~~-------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..       ...|.+.|+.||.+.+.+++.++++   +|+++.++.|
T Consensus       145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~g~~~v~lRp  188 (342)
T PLN02214        145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKE---KGVDLVVLNP  188 (342)
T ss_pred             cccCCChhhccccccHHHHHHHHHHHHHHHHHHH---cCCcEEEEeC
Confidence            00       1124467999999999999888776   4788888877

>PLN02240 UDP-glucose 4-epimerase

Probab=99.74  E-value=8.7e-17  Score=139.89  Aligned_cols=162  Identities=19%  Similarity=0.261  Sum_probs=117.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH----HHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG----QALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~----~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .|++|+++||||+|++|++++++|+++|++|++++|.....    .+......  ..++.++.+|+++++++++++++. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            46789999999999999999999999999999998754322    12222111  235788999999999998887753 


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cc
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EI  172 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~  172 (255)
                          ++|++||+|+....       ..+.+.+.+.+++|+.++.++++++..    .+.++++++||.+.....    ..
T Consensus        81 ----~~d~vih~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~vyg~~~~~~~~  145 (352)
T PLN02240         81 ----RFDAVIHFAGLKAV-------GESVAKPLLYYDNNLVGTINLLEVMAK----HGCKKLVFSSSATVYGQPEEVPCT  145 (352)
T ss_pred             ----CCCEEEEccccCCc-------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCC
Confidence                79999999764421       123356778999999999999887643    344679999975433211    11


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHH
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAE  200 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e  200 (255)
                      +.....|...|+.||.+.+.+.+.++.+
T Consensus       146 E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  173 (352)
T PLN02240        146 EEFPLSATNPYGRTKLFIEEICRDIHAS  173 (352)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            1222334578999999999999888765

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.74  E-value=9.7e-17  Score=126.88  Aligned_cols=168  Identities=19%  Similarity=0.321  Sum_probs=121.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcc---hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA-KVVIADVQDN---LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|||+.+|||..+++.|+++|. ++++++|+..   ...+..+++.  ..++.++.+|++|+++++++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            689999999999999999999985 8999999831   2333343333  357889999999999999999999998899


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ||.+||.|+...   ...+.+.+.++++.++...+.+..++.+.+.+    .+-..++..|    |.....+.++.   +
T Consensus        82 i~gVih~ag~~~---~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~l~~~i~~S----Sis~~~G~~gq---~  147 (181)
T PF08659_consen   82 IDGVIHAAGVLA---DAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RPLDFFILFS----SISSLLGGPGQ---S  147 (181)
T ss_dssp             EEEEEE----------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TTTSEEEEEE----EHHHHTT-TTB---H
T ss_pred             cceeeeeeeeec---ccccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CCCCeEEEEC----ChhHhccCcch---H
Confidence            999999987654   25678899999999999999999999887754    3445677777    34334444444   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .|+++.+.++.+++....    .|.++.+|+-
T Consensus       148 ~YaaAN~~lda~a~~~~~----~g~~~~sI~w  175 (181)
T PF08659_consen  148 AYAAANAFLDALARQRRS----RGLPAVSINW  175 (181)
T ss_dssp             HHHHHHHHHHHHHHHHHH----TTSEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHh----CCCCEEEEEc
Confidence            799999999988776544    5667777765

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.73  E-value=3.3e-16  Score=131.57  Aligned_cols=174  Identities=16%  Similarity=0.136  Sum_probs=126.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH--HHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA--LADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~--~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++++||||||.||..++++|+++||.|+.+.|+++..++  ...+++.  .+...+..|++|+++++++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            67899999999999999999999999999999999887544  3455542  468899999999999999888       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-cccCcC--C
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-EIEGLC--N  177 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-~~~~~~--~  177 (255)
                      +.|+++|.|......        ..+.-.++++..+.|+.++++++.+.   +.-.|||++||..+.... ......  .
T Consensus        78 gcdgVfH~Asp~~~~--------~~~~e~~li~pav~Gt~nVL~ac~~~---~sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD--------LEDPEKELIDPAVKGTKNVLEACKKT---KSVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             CCCEEEEeCccCCCC--------CCCcHHhhhhHHHHHHHHHHHHHhcc---CCcceEEEeccHHHhccCCcCCCCCccc
Confidence            799999976433211        11123378899999999999999754   234789999976544322 111110  0


Q ss_pred             CC------------CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          178 IP------------ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       178 ~~------------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      .+            ...|+.||...+.-+..++.|   .++.+.+|+| +.+-.|
T Consensus       147 dE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP-~lV~GP  197 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINP-GLVFGP  197 (327)
T ss_pred             ccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecC-CceECC
Confidence            00            124888888777666666665   5789999999 655554

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.73  E-value=4.2e-16  Score=128.06  Aligned_cols=163  Identities=18%  Similarity=0.226  Sum_probs=128.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++|||||.|-||...+.+|++.|++|++.++......+.....   .+.++++|+.|.+.+++++++.     +||.+|
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~---~~~f~~gDi~D~~~L~~vf~~~-----~idaVi   72 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL---QFKFYEGDLLDRALLTAVFEEN-----KIDAVV   72 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc---cCceEEeccccHHHHHHHHHhc-----CCCEEE
Confidence            46999999999999999999999999999999876655544432   1679999999999999998875     899999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~~~~~~~~  182 (255)
                      |.|+...       ...|.+...+-++.|+.+++.|++++...    +-..+||+||...++.+..    +..+..|.++
T Consensus        73 HFAa~~~-------VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~----gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NP  141 (329)
T COG1087          73 HFAASIS-------VGESVQNPLKYYDNNVVGTLNLIEAMLQT----GVKKFIFSSTAAVYGEPTTSPISETSPLAPINP  141 (329)
T ss_pred             ECccccc-------cchhhhCHHHHHhhchHhHHHHHHHHHHh----CCCEEEEecchhhcCCCCCcccCCCCCCCCCCc
Confidence            9876443       34577888999999999999999988754    4567999997765544322    2233346688


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEe
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCV  211 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v  211 (255)
                      |+.||...|.+-+.++.-.   +.++.++
T Consensus       142 YG~sKlm~E~iL~d~~~a~---~~~~v~L  167 (329)
T COG1087         142 YGRSKLMSEEILRDAAKAN---PFKVVIL  167 (329)
T ss_pred             chhHHHHHHHHHHHHHHhC---CCcEEEE
Confidence            9999999999988888864   4444444

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.72  E-value=1.8e-16  Score=136.17  Aligned_cols=169  Identities=17%  Similarity=0.161  Sum_probs=118.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH--hC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK--LG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~--~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++|+++||||+|+||+.++++|+++|++|+++.|+..........  ..  ..++.++.+|++++++++++++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            468899999999999999999999999999998876543222211  11  2368899999999988877765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC--ccccc--c----
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT--TACTE--I----  172 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~--~~~~~--~----  172 (255)
                      ++|++||+|+....    .    ..+.....+++|+.++.++++++.+..   +..++|++||.+.  .....  .    
T Consensus        76 ~~d~Vih~A~~~~~----~----~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~~~v~~SS~~~~~y~~~~~~~~~~~  144 (322)
T PLN02662         76 GCEGVFHTASPFYH----D----VTDPQAELIDPAVKGTLNVLRSCAKVP---SVKRVVVTSSMAAVAYNGKPLTPDVVV  144 (322)
T ss_pred             CCCEEEEeCCcccC----C----CCChHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEccCHHHhcCCCcCCCCCCcC
Confidence            58999999764321    0    111224788999999999999987532   3458999997542  11100  0    


Q ss_pred             -cCcCCCC------CcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          173 -EGLCNIP------ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       173 -~~~~~~~------~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                       ......|      .+.|+.+|.+.+.+++.++++   +++++..+.|+
T Consensus       145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~  190 (322)
T PLN02662        145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPA  190 (322)
T ss_pred             CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCC
Confidence             0000111      146999999999888777665   57889888883

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.71  E-value=5.3e-17  Score=135.06  Aligned_cols=195  Identities=18%  Similarity=0.195  Sum_probs=130.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHh----CCCce----EEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           29 AIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKL----GHQDV----CYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~----~~~~~----~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++||||+|.||.++++++++.+ .+++++++++..+-++..++    +..++    .++.+|++|.+.+..++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6899999999999999999987 57999999999988888777    22334    34578999999999888765    


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                       ++|+++|.|+.-..+       .-.+...+.+++|+.|+.++++++..+    +-.+++++|    ++      ....|
T Consensus        77 -~pdiVfHaAA~KhVp-------l~E~~p~eav~tNv~GT~nv~~aa~~~----~v~~~v~IS----TD------KAv~P  134 (293)
T PF02719_consen   77 -KPDIVFHAAALKHVP-------LMEDNPFEAVKTNVLGTQNVAEAAIEH----GVERFVFIS----TD------KAVNP  134 (293)
T ss_dssp             -T-SEEEE------HH-------HHCCCHHHHHHHHCHHHHHHHHHHHHT----T-SEEEEEE----EC------GCSS-
T ss_pred             -CCCEEEEChhcCCCC-------hHHhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEcc----cc------ccCCC
Confidence             899999987543321       122355677999999999999999864    456799999    32      22345


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh---HHhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA---IASIANAAL  231 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~---~~~~~~~~~  231 (255)
                      .+.|++||...+.++...+......+.++.+|.=|..+.+.                         |+   .+|.++.+.
T Consensus       135 tnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl  214 (293)
T PF02719_consen  135 TNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVL  214 (293)
T ss_dssp             -SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHH
Confidence            58899999999999999999876667777777642222221                         22   677777665


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .....     ...|+++..|-|.
T Consensus       215 ~a~~~-----~~~geifvl~mg~  232 (293)
T PF02719_consen  215 QAAAL-----AKGGEIFVLDMGE  232 (293)
T ss_dssp             HHHHH-------TTEEEEE---T
T ss_pred             HHHhh-----CCCCcEEEecCCC
Confidence            44212     1348888888774

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.71  E-value=4.2e-16  Score=131.34  Aligned_cols=202  Identities=17%  Similarity=0.159  Sum_probs=139.3

Q ss_pred             EEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHH-HHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           30 IITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQ-ALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        30 lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |||||+|.+|+.++++|+++|  ++|.++++.+.... +.....  +...++++|++|+++++++++       +.|++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~--~~~~~~~~Di~d~~~l~~a~~-------g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKS--GVKEYIQGDITDPESLEEALE-------GVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcc--cceeEEEeccccHHHHHHHhc-------CCceEE
Confidence            699999999999999999999  78999888765432 111211  233489999999999998887       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc--------Cc--C
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE--------GL--C  176 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~--------~~--~  176 (255)
                      |.|.....        ......+.++++|+.|+-++++++..    .+-.++|++||.+........        ..  .
T Consensus        72 H~Aa~~~~--------~~~~~~~~~~~vNV~GT~nvl~aa~~----~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~  139 (280)
T PF01073_consen   72 HTAAPVPP--------WGDYPPEEYYKVNVDGTRNVLEAARK----AGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYP  139 (280)
T ss_pred             EeCccccc--------cCcccHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcCcceeEeccCCCCcccCCcCCccc
Confidence            98754431        12345678899999999999999974    356789999987654431110        00  0


Q ss_pred             CCCCcccccchHHHHHHHHHHHH-Hhcc-cCcEEeEeccCcchhhh-----------------------------Hh--H
Q 025252          177 NIPANYYGVSKFGILGLVKSLAA-ELGR-YGIRVDCVSHTYGLAMA-----------------------------EA--I  223 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~-e~~~-~gi~v~~v~p~~~~~t~-----------------------------~~--~  223 (255)
                      ..+...|+.||+..|.++..... ++.. ..++..+|.| ..+-.+                             ++  .
T Consensus       140 ~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP-~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV  218 (280)
T PF01073_consen  140 SSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRP-AGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYV  218 (280)
T ss_pred             ccccCchHHHHHHHHHHHHhhcccccccccceeEEEEec-cEEeCcccccccchhhHHHHhcccceeecCCCceECcEeH
Confidence            11345799999999998877655 2221 2478888888 555443                             11  6


Q ss_pred             Hhhhhhhhhhhc-cCCC--CCeeeceeEEecCC
Q 025252          224 ASIANAALYNMA-KDDD--TSYVGKQNLLVNGG  253 (255)
Q Consensus       224 ~~~~~~~~~l~~-~~~~--~~~~~G~~i~~dgG  253 (255)
                      +++|.+.+-.++ +.+.  ...+.||.+.+..|
T Consensus       219 ~NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~  251 (280)
T PF01073_consen  219 ENVAHAHVLAAQALLEPGKPERVAGQAYFITDG  251 (280)
T ss_pred             HHHHHHHHHHHHHhccccccccCCCcEEEEECC
Confidence            777775543211 1122  46788999988776

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PLN02686 cinnamoyl-CoA reductase

Probab=99.68  E-value=1.7e-15  Score=132.62  Aligned_cols=177  Identities=13%  Similarity=0.165  Sum_probs=121.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh--C-----CCceEEEEeeCCCHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL--G-----HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~--~-----~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      ..+++|+++||||+|+||++++++|+++|++|+++.|+.+..+.+.+..  .     ...+.++.+|++|.+++.++++ 
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~-  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD-  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHH-
Confidence            4578999999999999999999999999999999888765544432211  0     1257788999999999888776 


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC--ccc---
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT--TAC---  169 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~--~~~---  169 (255)
                            ++|.++|.|+......   ..    .....+.++|+.++.++++++...   .+-.++|++||...  ...   
T Consensus       128 ------~~d~V~hlA~~~~~~~---~~----~~~~~~~~~nv~gt~~llea~~~~---~~v~r~V~~SS~~~~vyg~~~~  191 (367)
T PLN02686        128 ------GCAGVFHTSAFVDPAG---LS----GYTKSMAELEAKASENVIEACVRT---ESVRKCVFTSSLLACVWRQNYP  191 (367)
T ss_pred             ------hccEEEecCeeecccc---cc----cccchhhhhhHHHHHHHHHHHHhc---CCccEEEEeccHHHhcccccCC
Confidence                  4689998765432111   00    011244567899998888887642   12357888887421  100   


Q ss_pred             cc----ccC-------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          170 TE----IEG-------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       170 ~~----~~~-------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      ..    ...       ....|.+.|+.||.+.+.+++.++++   +|++++++.| +.+..
T Consensus       192 ~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp-~~vyG  248 (367)
T PLN02686        192 HDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICP-ALVTG  248 (367)
T ss_pred             CCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcC-CceEC
Confidence            00    000       01123457999999999999888776   6899999998 54433

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.66  E-value=5.8e-15  Score=121.01  Aligned_cols=163  Identities=20%  Similarity=0.291  Sum_probs=123.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      |+||||+|.||.+++++|.++|+.|+.+.|..........+.   ++.++.+|++|.+.++++++..     .+|.+||.
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~~   72 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL---NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIHL   72 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT---TEEEEESETTSHHHHHHHHHHH-----TESEEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc---eEEEEEeecccccccccccccc-----CceEEEEe
Confidence            699999999999999999999999988888776554444332   7889999999999999998876     79999998


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcccc
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANYYG  184 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~Y~  184 (255)
                      |+...       ...+.+.....++.|+.++.++++.+...    +..+++++||........    .+.....|...|+
T Consensus        73 a~~~~-------~~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~  141 (236)
T PF01370_consen   73 AAFSS-------NPESFEDPEEIIEANVQGTRNLLEAAREA----GVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYG  141 (236)
T ss_dssp             BSSSS-------HHHHHHSHHHHHHHHHHHHHHHHHHHHHH----TTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHH
T ss_pred             ecccc-------ccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence            76432       11133566788889999998888888653    336899999764443331    0111123456799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+|...+.+.+.+.++   .++++..+.|
T Consensus       142 ~~K~~~e~~~~~~~~~---~~~~~~~~R~  167 (236)
T PF01370_consen  142 ASKRAAEELLRDYAKK---YGLRVTILRP  167 (236)
T ss_dssp             HHHHHHHHHHHHHHHH---HTSEEEEEEE
T ss_pred             cccccccccccccccc---cccccccccc
Confidence            9999999999888876   4788888877

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.66  E-value=5.7e-15  Score=127.76  Aligned_cols=158  Identities=16%  Similarity=0.231  Sum_probs=111.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH---HHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL---ADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +++||||+|+||++++++|+++|++|++++|........   ..+....++.++.+|++|++++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            599999999999999999999999999987653322211   1222234577889999999998887764     37999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---c--cCcCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---I--EGLCNIP  179 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~--~~~~~~~  179 (255)
                      +||+|+.....       ...+.....+++|+.++.++++++..    .+.+++|++||.+......   .  ..+...|
T Consensus        77 vvh~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p  145 (338)
T PRK10675         77 VIHFAGLKAVG-------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNLIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_pred             EEECCcccccc-------chhhCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence            99997654311       12234456789999999999887653    3446799988764332110   0  0111134


Q ss_pred             CcccccchHHHHHHHHHHHHHh
Q 025252          180 ANYYGVSKFGILGLVKSLAAEL  201 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~  201 (255)
                      ...|+.+|.+.+.+++.++++.
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~  167 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQ  167 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhc
Confidence            5789999999999999987664

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.66  E-value=1.1e-14  Score=126.72  Aligned_cols=203  Identities=19%  Similarity=0.176  Sum_probs=130.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchH---HHHHHHh---C------C-CceEEEEeeCCCHHH-H-HH
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLG---QALADKL---G------H-QDVCYIHCDVSNERE-V-IN   90 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~---~~~~~~~---~------~-~~~~~~~~D~~~~~~-~-~~   90 (255)
                      +++||||||+||++++++|+++|  ++|+++.|+.+..   +++.+.+   .      . .++.++.+|++++.. + ..
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999998  7799999986532   1222111   1      0 368899999986531 0 11


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT  170 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~  170 (255)
                      ..+++   ..++|++||+|+....          ...++..+++|+.++..+++.+..    .+..+++++||.+.....
T Consensus        81 ~~~~~---~~~~d~vih~a~~~~~----------~~~~~~~~~~nv~g~~~ll~~a~~----~~~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 EWERL---AENVDTIVHNGALVNW----------VYPYSELRAANVLGTREVLRLAAS----GRAKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHH---HhhCCEEEeCCcEecc----------CCcHHHHhhhhhHHHHHHHHHHhh----CCCceEEEEccccccCCc
Confidence            11222   1379999999865431          123566778999999999888764    233459999977544321


Q ss_pred             ccc-----C----cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------
Q 025252          171 EIE-----G----LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------  220 (255)
Q Consensus       171 ~~~-----~----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------  220 (255)
                      ...     .    ....+...|+.||++.+.+.+.++.    .|++++.+.||......                     
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~  219 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLAL  219 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHh
Confidence            110     0    0011235699999999988776544    48999999984333210                     


Q ss_pred             -----------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 -----------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 -----------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                                 .+  .++++.+++.+  ......+.+|+++.+.++
T Consensus       220 ~~~p~~~~~~~~~~~vddva~ai~~~--~~~~~~~~~~~~~~v~~~  263 (367)
T TIGR01746       220 GAYPDSPELTEDLTPVDYVARAIVAL--SSQPAASAGGPVFHVVNP  263 (367)
T ss_pred             CCCCCCCccccCcccHHHHHHHHHHH--HhCCCcccCCceEEecCC
Confidence                       01  56677777766  434333345777887764

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.66  E-value=5e-15  Score=138.87  Aligned_cols=172  Identities=14%  Similarity=0.149  Sum_probs=119.0

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH-HHHHHHH
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE-VINLVDT   94 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~   94 (255)
                      ..|.+...++|+++||||+|.||+.++++|+++ |++|+.++|........   ....++.++.+|++|.++ ++++++ 
T Consensus       306 ~~~~~~~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~---~~~~~~~~~~gDl~d~~~~l~~~l~-  381 (660)
T PRK08125        306 SKPACSAKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF---LGHPRFHFVEGDISIHSEWIEYHIK-  381 (660)
T ss_pred             ccchhhhhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh---cCCCceEEEeccccCcHHHHHHHhc-
Confidence            345555578899999999999999999999985 79999999976543322   122468889999998655 333332 


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---  171 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---  171 (255)
                            ++|++||.|+.....       ...+..+..+++|+.++.++++++...    + .++|++||........   
T Consensus       382 ------~~D~ViHlAa~~~~~-------~~~~~~~~~~~~Nv~~t~~ll~a~~~~----~-~~~V~~SS~~vyg~~~~~~  443 (660)
T PRK08125        382 ------KCDVVLPLVAIATPI-------EYTRNPLRVFELDFEENLKIIRYCVKY----N-KRIIFPSTSEVYGMCTDKY  443 (660)
T ss_pred             ------CCCEEEECccccCch-------hhccCHHHHHHhhHHHHHHHHHHHHhc----C-CeEEEEcchhhcCCCCCCC
Confidence                  689999987654311       111233467889999999999998753    2 4788999764433211   


Q ss_pred             c-cC-------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          172 I-EG-------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       172 ~-~~-------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      . ..       +...|.+.|+.||.+.+.+.+.++++   +|+++..+.|
T Consensus       444 ~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~  490 (660)
T PRK08125        444 FDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEK---EGLRFTLFRP  490 (660)
T ss_pred             cCccccccccCCCCCCccchHHHHHHHHHHHHHHHHh---cCCceEEEEE
Confidence            0 00       11123457999999999999988766   4566665554

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.65  E-value=6.4e-15  Score=126.44  Aligned_cols=168  Identities=16%  Similarity=0.192  Sum_probs=117.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++||||+|+||++++++|.++|++|++++|......+...... ..++..+.+|++++++++++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            37999999999999999999999999988765432222212111 12577889999999999888764     3799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+....       ..+.+...+.++.|+.++..+++++.+    .+.++++++||........    .......|...
T Consensus        76 ~~ag~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~  144 (328)
T TIGR01179        76 HFAGLIAV-------GESVQDPLKYYRNNVVNTLNLLEAMQQ----TGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINP  144 (328)
T ss_pred             ECccccCc-------chhhcCchhhhhhhHHHHHHHHHHHHh----cCCCEEEEecchhhcCCCCCCCccccCCCCCCCc
Confidence            99875431       113344567788999999999887653    3346788888654332111    01112234577


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |+.+|++.+.+++.++++.  .++++..+.|
T Consensus       145 y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~  173 (328)
T TIGR01179       145 YGRSKLMSERILRDLSKAD--PGLSYVILRY  173 (328)
T ss_pred             hHHHHHHHHHHHHHHHHhc--cCCCEEEEec
Confidence            9999999999999987652  4677777776

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.65  E-value=1.7e-14  Score=135.76  Aligned_cols=172  Identities=19%  Similarity=0.199  Sum_probs=119.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKN--GAKVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .++|+++||||+|.||++++++|+++  +++|++++|..  +....+.......++.++.+|++|.+.+..++..     
T Consensus         4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~-----   78 (668)
T PLN02260          4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT-----   78 (668)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh-----
Confidence            45788999999999999999999998  68899888753  2222222111224688999999999887665432     


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-------
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-------  172 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-------  172 (255)
                      .++|++||+|+....       +.+.+.....+++|+.++.++++++...   ....++|++||.........       
T Consensus        79 ~~~D~ViHlAa~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~~vkr~I~~SS~~vyg~~~~~~~~~~~  148 (668)
T PLN02260         79 EGIDTIMHFAAQTHV-------DNSFGNSFEFTKNNIYGTHVLLEACKVT---GQIRRFIHVSTDEVYGETDEDADVGNH  148 (668)
T ss_pred             cCCCEEEECCCccCc-------hhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCCcEEEEEcchHHhCCCccccccCcc
Confidence            379999999765431       1223344567889999999998887532   12468999997644332111       


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ......|.+.|+.+|.+.+.+++.++++   .++++.++.|
T Consensus       149 E~~~~~p~~~Y~~sK~~aE~~v~~~~~~---~~l~~vilR~  186 (668)
T PLN02260        149 EASQLLPTNPYSATKAGAEMLVMAYGRS---YGLPVITTRG  186 (668)
T ss_pred             ccCCCCCCCCcHHHHHHHHHHHHHHHHH---cCCCEEEECc
Confidence            1112235578999999999999888776   4666767766

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.64  E-value=4.8e-15  Score=127.43  Aligned_cols=161  Identities=20%  Similarity=0.183  Sum_probs=117.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||+|+||+.+++.|+++|++|++++|+++.....    ....+.++.+|+++.++++++++       ++|++|
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~D~~~~~~l~~~~~-------~~d~vi   69 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----EGLDVEIVEGDLRDPASLRKAVA-------GCRALF   69 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----ccCCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            3699999999999999999999999999999986653221    12367889999999998877765       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCCC--
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNIP--  179 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~~--  179 (255)
                      |+|+...         ...+.++..+++|+.++.++++++.+    .+.+++|++||.........     ......|  
T Consensus        70 ~~a~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~  136 (328)
T TIGR03466        70 HVAADYR---------LWAPDPEEMYAANVEGTRNLLRAALE----AGVERVVYTSSVATLGVRGDGTPADETTPSSLDD  136 (328)
T ss_pred             Eeceecc---------cCCCCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEechhhcCcCCCCCCcCccCCCCccc
Confidence            9875322         11234567889999999999998764    23468999997654332111     0011111  


Q ss_pred             -CcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          180 -ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       180 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                       ...|+.+|.+.+.+++.++.+   .++++..+.|+
T Consensus       137 ~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~  169 (328)
T TIGR03466       137 MIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPS  169 (328)
T ss_pred             ccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCC
Confidence             246999999999999888765   47888888773

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.64  E-value=1e-14  Score=126.86  Aligned_cols=162  Identities=15%  Similarity=0.139  Sum_probs=110.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCC-CHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS-NEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||+|.||+.++++|+++ |++|++++|+......+   .....+.++.+|++ +.+.+.++++       ++|+
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~---~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d~   71 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL---VNHPRMHFFEGDITINKEWIEYHVK-------KCDV   71 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh---ccCCCeEEEeCCCCCCHHHHHHHHc-------CCCE
Confidence            46999999999999999999986 69999999865433222   22246888999998 6666555433       6899


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cC------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EG------  174 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~------  174 (255)
                      +||.|+.....       ...++.+..+++|+.++.++++++..    .+ .++|++||...+.....    +.      
T Consensus        72 ViH~aa~~~~~-------~~~~~p~~~~~~n~~~~~~ll~aa~~----~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~  139 (347)
T PRK11908         72 ILPLVAIATPA-------TYVKQPLRVFELDFEANLPIVRSAVK----YG-KHLVFPSTSEVYGMCPDEEFDPEASPLVY  139 (347)
T ss_pred             EEECcccCChH-------HhhcCcHHHHHHHHHHHHHHHHHHHh----cC-CeEEEEecceeeccCCCcCcCcccccccc
Confidence            99987643211       11234456789999999998888764    23 58999997654432110    00      


Q ss_pred             -cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 -LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       +...|.+.|+.||.+.+.+.+.++.+   .|+.+..+.|
T Consensus       140 ~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~  176 (347)
T PRK11908        140 GPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRP  176 (347)
T ss_pred             CcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEee
Confidence             11124457999999999999888765   4555555544

>PLN02427 UDP-apiose/xylose synthase

Probab=99.64  E-value=7.3e-15  Score=129.56  Aligned_cols=168  Identities=14%  Similarity=0.105  Sum_probs=114.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+++||||+|.||+.++++|+++ |++|++++|+.+....+....   ...++.++.+|++|.+.++++++      
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~------   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK------   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh------
Confidence            45568999999999999999999998 599999998765443332211   11368899999999988877665      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----ccC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----IEG  174 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~~~  174 (255)
                       ++|++||+|+......       ...+..+.+..|+.++.++++++..    .+ .++|++||...+....     ...
T Consensus        86 -~~d~ViHlAa~~~~~~-------~~~~~~~~~~~n~~gt~~ll~aa~~----~~-~r~v~~SS~~vYg~~~~~~~~e~~  152 (386)
T PLN02427         86 -MADLTINLAAICTPAD-------YNTRPLDTIYSNFIDALPVVKYCSE----NN-KRLIHFSTCEVYGKTIGSFLPKDH  152 (386)
T ss_pred             -cCCEEEEcccccChhh-------hhhChHHHHHHHHHHHHHHHHHHHh----cC-CEEEEEeeeeeeCCCcCCCCCccc
Confidence             5799999876432110       1112234456799999999888753    23 5799999764332110     000


Q ss_pred             c---------------------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 L---------------------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ~---------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +                     ...|.+.|+.||.+.+.+...+++.   .|+++..+.|
T Consensus       153 p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~  209 (386)
T PLN02427        153 PLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRP  209 (386)
T ss_pred             ccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecc
Confidence            0                     0012357999999999988776554   5777777776

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.60  E-value=5.7e-14  Score=116.70  Aligned_cols=184  Identities=11%  Similarity=0.093  Sum_probs=118.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~i  102 (255)
                      .++|+++||||+|+||++++++|+++|++|+++.|+.+...+....  ..++.++.+|+++. +++.+.+   .   .++
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~l~~~~---~---~~~   86 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQ--DPSLQIVRADVTEGSDKLVEAI---G---DDS   86 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhccc--CCceEEEEeeCCCCHHHHHHHh---h---cCC
Confidence            4568899999999999999999999999999999987654433221  23688899999984 3332222   0   269


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|++++....  ..+         ...+++|+.++.++++++.    +.+.++|+++||.+..... .+.+.   ...
T Consensus        87 d~vi~~~g~~~~--~~~---------~~~~~~n~~~~~~ll~a~~----~~~~~~iV~iSS~~v~g~~-~~~~~---~~~  147 (251)
T PLN00141         87 DAVICATGFRRS--FDP---------FAPWKVDNFGTVNLVEACR----KAGVTRFILVSSILVNGAA-MGQIL---NPA  147 (251)
T ss_pred             CEEEECCCCCcC--CCC---------CCceeeehHHHHHHHHHHH----HcCCCEEEEEccccccCCC-ccccc---Ccc
Confidence            999998654320  011         1124678888888888874    3456789999976533211 11111   133


Q ss_pred             cccchHHHHHH-HHHHHHH-hcccCcEEeEeccCcchhhh----------------Hh-HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGL-VKSLAAE-LGRYGIRVDCVSHTYGLAMA----------------EA-IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~-~~~la~e-~~~~gi~v~~v~p~~~~~t~----------------~~-~~~~~~~~~~l~  234 (255)
                      |...|.....+ .+..+.+ ++..|+++++|.|++.....                .. +++++..+..++
T Consensus       148 ~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~~~~~~~~~~~i~~~dvA~~~~~~~  218 (251)
T PLN00141        148 YIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVMEPEDTLYEGSISRDQVAEVAVEAL  218 (251)
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEECCCCccccCcccHHHHHHHHHHHh
Confidence            66666544433 3333333 46679999999995433321                01 788888888883

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.58  E-value=5.8e-14  Score=123.13  Aligned_cols=168  Identities=15%  Similarity=0.170  Sum_probs=114.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |--.+|+++||||+|.||++++++|.++|++|++++|......  ..  ......++.+|+++.+.+.++++       +
T Consensus        17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~--~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   85 (370)
T PLN02695         17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHM--SE--DMFCHEFHLVDLRVMENCLKVTK-------G   85 (370)
T ss_pred             CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccc--cc--ccccceEEECCCCCHHHHHHHHh-------C
Confidence            3337789999999999999999999999999999998643211  00  01124678899999887766553       6


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----c---
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----E---  173 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~---  173 (255)
                      +|++||.|+.....   ..   ........++.|+.++.++++++..    .+..++|++||...+.....     +   
T Consensus        86 ~D~Vih~Aa~~~~~---~~---~~~~~~~~~~~N~~~t~nll~aa~~----~~vk~~V~~SS~~vYg~~~~~~~~~~~~E  155 (370)
T PLN02695         86 VDHVFNLAADMGGM---GF---IQSNHSVIMYNNTMISFNMLEAARI----NGVKRFFYASSACIYPEFKQLETNVSLKE  155 (370)
T ss_pred             CCEEEEcccccCCc---cc---cccCchhhHHHHHHHHHHHHHHHHH----hCCCEEEEeCchhhcCCccccCcCCCcCc
Confidence            89999987543211   11   1112234567899999999988753    23458999997654332110     0   


Q ss_pred             C--cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          174 G--LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       174 ~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .  .+..|.+.|+.+|.+.+.+.+.++..   .|+++..+.|
T Consensus       156 ~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~  194 (370)
T PLN02695        156 SDAWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRF  194 (370)
T ss_pred             ccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEE
Confidence            0  13345678999999999998887665   4666666655

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.57  E-value=6.4e-14  Score=119.62  Aligned_cols=160  Identities=21%  Similarity=0.227  Sum_probs=116.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc-cEEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL-DILVN  107 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i-d~li~  107 (255)
                      ++|||++|.||++++++|.++|++|+.++|.........     ..+.++.+|+++.+...+..+       .. |.+||
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~d~~~~~~~~~~~~-------~~~d~vih   70 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-----SGVEFVVLDLTDRDLVDELAK-------GVPDAVIH   70 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-----cccceeeecccchHHHHHHHh-------cCCCEEEE
Confidence            999999999999999999999999999999776543322     357789999999855555444       33 99999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-----cccC-cCCCCCc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-----EIEG-LCNIPAN  181 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-----~~~~-~~~~~~~  181 (255)
                      +|+.....    ....+  .....+.+|+.++.++++++..    .+..++++.||.+.....     ..+. ....|.+
T Consensus        71 ~aa~~~~~----~~~~~--~~~~~~~~nv~gt~~ll~aa~~----~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~  140 (314)
T COG0451          71 LAAQSSVP----DSNAS--DPAEFLDVNVDGTLNLLEAARA----AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLN  140 (314)
T ss_pred             ccccCchh----hhhhh--CHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCC
Confidence            87654311    11111  3556889999999999999875    355778887765433322     0111 2334445


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .|+.||.+.+.++...+.   ..|+.+..+.|
T Consensus       141 ~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~  169 (314)
T COG0451         141 PYGVSKLAAEQLLRAYAR---LYGLPVVILRP  169 (314)
T ss_pred             HHHHHHHHHHHHHHHHHH---HhCCCeEEEee
Confidence            699999999999988888   46788888887

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.56  E-value=5.8e-14  Score=120.01  Aligned_cols=160  Identities=19%  Similarity=0.241  Sum_probs=105.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH--HcCCccEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA--KFGKLDILV  106 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id~li  106 (255)
                      ++||||+|.||++++++|+++|++++++.|+.......        .....+|++|..+.+++++++.+  .++++|++|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~--------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vi   73 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIF   73 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH--------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEE
Confidence            79999999999999999999999766665554322111        11234677776666666665543  235799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+.....      ..   +.+..+++|+.++.++++++..    .+ .++|++||........    .+.....|.+.
T Consensus        74 h~A~~~~~~------~~---~~~~~~~~n~~~t~~ll~~~~~----~~-~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~  139 (308)
T PRK11150         74 HEGACSSTT------EW---DGKYMMDNNYQYSKELLHYCLE----RE-IPFLYASSAATYGGRTDDFIEEREYEKPLNV  139 (308)
T ss_pred             ECceecCCc------CC---ChHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEcchHHhCcCCCCCCccCCCCCCCCH
Confidence            987643311      11   1235689999999999998864    23 3589999765433211    11122345577


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |+.||.+.+.+.+.++.+   .++++..+.|
T Consensus       140 Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~  167 (308)
T PRK11150        140 YGYSKFLFDEYVRQILPE---ANSQICGFRY  167 (308)
T ss_pred             HHHHHHHHHHHHHHHHHH---cCCCEEEEee
Confidence            999999999998887665   3555555554

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.53  E-value=1.9e-13  Score=113.53  Aligned_cols=161  Identities=19%  Similarity=0.285  Sum_probs=123.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++++||||+|.||.+.+.+|.++|++|+++|+-..    .++...+... ...+.+++.|+.|.+.+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            578999999999999999999999999999987533    3333333332 257999999999999999999986     


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCc
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGL  175 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~  175 (255)
                      ++|.++|.|+....       ..+.+...+..++|+.++++++..+..+    +-..++++||......+..     ..+
T Consensus        77 ~fd~V~Hfa~~~~v-------geS~~~p~~Y~~nNi~gtlnlLe~~~~~----~~~~~V~sssatvYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   77 KFDAVMHFAALAAV-------GESMENPLSYYHNNIAGTLNLLEVMKAH----NVKALVFSSSATVYGLPTKVPITEEDP  145 (343)
T ss_pred             CCceEEeehhhhcc-------chhhhCchhheehhhhhHHHHHHHHHHc----CCceEEEecceeeecCcceeeccCcCC
Confidence            79999998654442       2355556888999999999998887654    3567999997765544321     223


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELG  202 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~  202 (255)
                      ..+|.+.|+.+|.+++.....+..-+.
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            335778999999999999888877654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.52  E-value=1.3e-13  Score=117.47  Aligned_cols=139  Identities=20%  Similarity=0.192  Sum_probs=101.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||+|.||++++++|.++| +|++++|...               .+.+|++|.+.++++++..     ++|++|
T Consensus         1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~---------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vi   59 (299)
T PRK09987          1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST---------------DYCGDFSNPEGVAETVRKI-----RPDVIV   59 (299)
T ss_pred             CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc---------------cccCCCCCHHHHHHHHHhc-----CCCEEE
Confidence            369999999999999999999999 7888887532               2457999999998887753     689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~~~~~~~~~  182 (255)
                      |+|+....       +...++.+..+.+|+.++.++++++...    + .+++++||...+...    ..+.....|.+.
T Consensus        60 h~Aa~~~~-------~~~~~~~~~~~~~N~~~~~~l~~aa~~~----g-~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         60 NAAAHTAV-------DKAESEPEFAQLLNATSVEAIAKAANEV----G-AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             ECCccCCc-------chhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            99765431       1122334566789999999999988642    2 368888865433211    112223356678


Q ss_pred             cccchHHHHHHHHHHH
Q 025252          183 YGVSKFGILGLVKSLA  198 (255)
Q Consensus       183 Y~asKaa~~~~~~~la  198 (255)
                      |+.||.+.+.+++...
T Consensus       128 Yg~sK~~~E~~~~~~~  143 (299)
T PRK09987        128 YGETKLAGEKALQEHC  143 (299)
T ss_pred             HHHHHHHHHHHHHHhC
Confidence            9999999999876654

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.52  E-value=4.8e-13  Score=119.65  Aligned_cols=168  Identities=16%  Similarity=0.134  Sum_probs=112.4

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .|.-++-++|+++||||+|.||+.++++|+++|++|++++|..... +.....+...++.++..|+.++.     +    
T Consensus       111 ~~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l----  181 (442)
T PLN02206        111 IPLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L----  181 (442)
T ss_pred             CccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h----
Confidence            3444455788999999999999999999999999999988753322 22222223346778888987653     1    


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---c-
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---I-  172 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~-  172 (255)
                         .++|++||.|+.....       ......++.+++|+.++.++++++...    + .++|++||...+....   . 
T Consensus       182 ---~~~D~ViHlAa~~~~~-------~~~~~p~~~~~~Nv~gt~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~  246 (442)
T PLN02206        182 ---LEVDQIYHLACPASPV-------HYKFNPVKTIKTNVVGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLQHPQV  246 (442)
T ss_pred             ---cCCCEEEEeeeecchh-------hhhcCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECChHHhCCCCCCCCC
Confidence               1589999987643211       111234678899999999999988643    2 3789999765432211   0 


Q ss_pred             cC-----cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEec
Q 025252          173 EG-----LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS  212 (255)
Q Consensus       173 ~~-----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  212 (255)
                      ..     .+..+.+.|+.+|.+.+.+++.+.++   .++++..+.
T Consensus       247 E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR  288 (442)
T PLN02206        247 ETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIAR  288 (442)
T ss_pred             ccccccCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEE
Confidence            00     11223467999999999988877665   355555554

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.51  E-value=3.9e-13  Score=113.63  Aligned_cols=142  Identities=23%  Similarity=0.265  Sum_probs=102.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      ++||||+|.||++++++|.++|++|++++|.                   .+|+.+.++++++++..     ++|++||+
T Consensus         2 ilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-------------------~~d~~~~~~~~~~~~~~-----~~d~vi~~   57 (287)
T TIGR01214         2 ILITGANGQLGRELVQQLSPEGRVVVALTSS-------------------QLDLTDPEALERLLRAI-----RPDAVVNT   57 (287)
T ss_pred             EEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-------------------ccCCCCHHHHHHHHHhC-----CCCEEEEC
Confidence            7999999999999999999999999999884                   47999999998887753     68999998


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccCcCCCCCcccc
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEGLCNIPANYYG  184 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~~~~~~~~~Y~  184 (255)
                      |+....       +......+..+++|+.++.++++++.+.    + .+++++||...+...    ..+.....|...|+
T Consensus        58 a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~  125 (287)
T TIGR01214        58 AAYTDV-------DGAESDPEKAFAVNALAPQNLARAAARH----G-ARLVHISTDYVFDGEGKRPYREDDATNPLNVYG  125 (287)
T ss_pred             Cccccc-------cccccCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence            764431       1122334567889999999999887542    2 378998865433211    01111223456799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+|.+.+.+.+.+       +.++..+.|
T Consensus       126 ~~K~~~E~~~~~~-------~~~~~ilR~  147 (287)
T TIGR01214       126 QSKLAGEQAIRAA-------GPNALIVRT  147 (287)
T ss_pred             HHHHHHHHHHHHh-------CCCeEEEEe
Confidence            9999999887765       235556665

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.49  E-value=5.8e-13  Score=113.90  Aligned_cols=148  Identities=22%  Similarity=0.253  Sum_probs=100.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      ++||||+|.||.+++++|.++|+ +|++++|..... .+. ++   ....+..|+++.+.++.+.+.   .++++|++||
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~---~~~~~~~d~~~~~~~~~~~~~---~~~~~D~vvh   72 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NL---ADLVIADYIDKEDFLDRLEKG---AFGKIEAIFH   72 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hh---hheeeeccCcchhHHHHHHhh---ccCCCCEEEE
Confidence            58999999999999999999997 788887754322 111 11   113466788887776655442   2358999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCcCCCCCccc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGLCNIPANYY  183 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~~~~~~~~Y  183 (255)
                      +|+...         .+.++.+..+++|+.++.++++++...    + .+++++||.........    ......|.+.|
T Consensus        73 ~A~~~~---------~~~~~~~~~~~~n~~~~~~ll~~~~~~----~-~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y  138 (314)
T TIGR02197        73 QGACSD---------TTETDGEYMMENNYQYSKRLLDWCAEK----G-IPFIYASSAATYGDGEAGFREGRELERPLNVY  138 (314)
T ss_pred             CccccC---------ccccchHHHHHHHHHHHHHHHHHHHHh----C-CcEEEEccHHhcCCCCCCcccccCcCCCCCHH
Confidence            976432         122345678899999999999988642    2 36999997654332111    11112355789


Q ss_pred             ccchHHHHHHHHHHH
Q 025252          184 GVSKFGILGLVKSLA  198 (255)
Q Consensus       184 ~asKaa~~~~~~~la  198 (255)
                      +.||.+.+.+++...
T Consensus       139 ~~sK~~~e~~~~~~~  153 (314)
T TIGR02197       139 GYSKFLFDQYVRRRV  153 (314)
T ss_pred             HHHHHHHHHHHHHHh
Confidence            999999999887643

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.49  E-value=1.3e-12  Score=112.18  Aligned_cols=179  Identities=12%  Similarity=0.036  Sum_probs=120.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||||.+|+.++++|+++|++|++++|+.+....+.    ..++.++.+|++|++++.++++       ++|++||
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi~   70 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK----EWGAELVYGDLSLPETLPPSFK-------GVTAIID   70 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh----hcCCEEEECCCCCHHHHHHHHC-------CCCEEEE
Confidence            6999999999999999999999999999999865433222    2368899999999998877665       6899999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccch
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK  187 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asK  187 (255)
                      +++...            .+.....++|+.++.++++++..    .+-.++|++|+.+...   .      +...|..+|
T Consensus        71 ~~~~~~------------~~~~~~~~~~~~~~~~l~~aa~~----~gvkr~I~~Ss~~~~~---~------~~~~~~~~K  125 (317)
T CHL00194         71 ASTSRP------------SDLYNAKQIDWDGKLALIEAAKA----AKIKRFIFFSILNAEQ---Y------PYIPLMKLK  125 (317)
T ss_pred             CCCCCC------------CCccchhhhhHHHHHHHHHHHHH----cCCCEEEEeccccccc---c------CCChHHHHH
Confidence            643111            11233566788888888887754    3445899988543211   1      114477888


Q ss_pred             HHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhhccCCCCCe
Q 025252          188 FGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       188 aa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      ...+.+.+       ..++++..+.|+++...-                       .+  .+|++.++...  +....  
T Consensus       126 ~~~e~~l~-------~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~--l~~~~--  194 (317)
T CHL00194        126 SDIEQKLK-------KSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWITNESTPISYIDTQDAAKFCLKS--LSLPE--  194 (317)
T ss_pred             HHHHHHHH-------HcCCCeEEEeecHHhhhhhhhhhhhhccCCceEecCCCCccCccCHHHHHHHHHHH--hcCcc--
Confidence            87776543       257777778774332210                       00  47888888766  43222  


Q ss_pred             eeceeEEecCC
Q 025252          243 VGKQNLLVNGG  253 (255)
Q Consensus       243 ~~G~~i~~dgG  253 (255)
                      ..|+++.+-|+
T Consensus       195 ~~~~~~ni~g~  205 (317)
T CHL00194        195 TKNKTFPLVGP  205 (317)
T ss_pred             ccCcEEEecCC
Confidence            23777777665

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.48  E-value=8.2e-13  Score=117.95  Aligned_cols=168  Identities=17%  Similarity=0.130  Sum_probs=111.6

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +|.-.+=+.++++||||+|.||+.++++|+++|++|++++|..... ..........++.++..|+.+..     +    
T Consensus       112 ~~~~~~~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~----  182 (436)
T PLN02166        112 VPVGIGRKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L----  182 (436)
T ss_pred             CCcccccCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c----
Confidence            3333344567899999999999999999999999999999864321 12211112235777888886542     1    


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---c-
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---I-  172 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~-  172 (255)
                         .++|++||.|+.....       ....+....+++|+.++.++++++...    + .++|++||...+....   . 
T Consensus       183 ---~~~D~ViHlAa~~~~~-------~~~~~p~~~~~~Nv~gT~nLleaa~~~----g-~r~V~~SS~~VYg~~~~~p~~  247 (436)
T PLN02166        183 ---LEVDQIYHLACPASPV-------HYKYNPVKTIKTNVMGTLNMLGLAKRV----G-ARFLLTSTSEVYGDPLEHPQK  247 (436)
T ss_pred             ---cCCCEEEECceeccch-------hhccCHHHHHHHHHHHHHHHHHHHHHh----C-CEEEEECcHHHhCCCCCCCCC
Confidence               2689999987643211       011234678899999999999988653    2 3788888765433211   0 


Q ss_pred             cC-----cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEec
Q 025252          173 EG-----LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS  212 (255)
Q Consensus       173 ~~-----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  212 (255)
                      ..     .+..|.+.|+.+|.+.+.+++.+++.   .++++..+.
T Consensus       248 E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR  289 (436)
T PLN02166        248 ETYWGNVNPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIAR  289 (436)
T ss_pred             ccccccCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEE
Confidence            11     12234567999999999999887665   355555554

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.48  E-value=9.9e-13  Score=116.03  Aligned_cols=158  Identities=9%  Similarity=0.037  Sum_probs=110.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH---HHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA---LADKL-GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~---~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .++++++||||+|+||++++++|+++|++|++++|+......   ..+.. ...++.++.+|++|+++++++++...   
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence            357799999999999999999999999999999998654221   01111 12468899999999999988887531   


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||+++...    ..    .    ...+++|+.++.++++++.    +.+.+++|++|+....          .|
T Consensus       135 ~~~D~Vi~~aa~~~----~~----~----~~~~~vn~~~~~~ll~aa~----~~gv~r~V~iSS~~v~----------~p  188 (390)
T PLN02657        135 DPVDVVVSCLASRT----GG----V----KDSWKIDYQATKNSLDAGR----EVGAKHFVLLSAICVQ----------KP  188 (390)
T ss_pred             CCCcEEEECCccCC----CC----C----ccchhhHHHHHHHHHHHHH----HcCCCEEEEEeecccc----------Cc
Confidence            16999999865321    00    1    1234578888877777764    3345689999955321          12


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY  215 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~  215 (255)
                      ...|..+|...+...+.     ...+++...+.|+.
T Consensus       189 ~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~  219 (390)
T PLN02657        189 LLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTA  219 (390)
T ss_pred             chHHHHHHHHHHHHHHh-----ccCCCCEEEEccHH
Confidence            24588889888876543     23678888888844

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.45  E-value=2.1e-12  Score=107.20  Aligned_cols=168  Identities=16%  Similarity=0.130  Sum_probs=96.9

Q ss_pred             EecCCChHHHHHHHHHHHcCC--EEEEEecCcch---HHHHHHHhC------------CCceEEEEeeCCCHHH-H-HHH
Q 025252           31 ITGGASGIGASAAQLFHKNGA--KVVIADVQDNL---GQALADKLG------------HQDVCYIHCDVSNERE-V-INL   91 (255)
Q Consensus        31 VtGas~giG~aia~~l~~~g~--~v~~~~r~~~~---~~~~~~~~~------------~~~~~~~~~D~~~~~~-~-~~~   91 (255)
                      ||||||.||..++++|++.+.  +|+++.|..+.   .+++.+.+.            ..+++++.+|++++.- + ++.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997643   333322221            3689999999998531 1 111


Q ss_pred             HHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc
Q 025252           92 VDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE  171 (255)
Q Consensus        92 ~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~  171 (255)
                      ++++.+   .+|++||+|+.....          ..+.+..++|+.|+.++++.+..    .+..+++++||........
T Consensus        81 ~~~L~~---~v~~IiH~Aa~v~~~----------~~~~~~~~~NV~gt~~ll~la~~----~~~~~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   81 YQELAE---EVDVIIHCAASVNFN----------APYSELRAVNVDGTRNLLRLAAQ----GKRKRFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHHH---H--EEEE--SS-SBS-----------S--EEHHHHHHHHHHHHHHHTS----SS---EEEEEEGGGTTS-T
T ss_pred             hhcccc---ccceeeecchhhhhc----------ccchhhhhhHHHHHHHHHHHHHh----ccCcceEEeccccccCCCC
Confidence            222222   689999998765422          13445778899999888888852    2334899999731111111


Q ss_pred             c-------------cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          172 I-------------EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       172 ~-------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      .             ..........|..||+..|.+.+..+.+   .|+.+..+.| +.+-.
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp-~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRP-GIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE--EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEec-Ccccc
Confidence            0             0011122357999999999998888775   5888999999 54433

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.41  E-value=9.1e-13  Score=111.57  Aligned_cols=134  Identities=20%  Similarity=0.240  Sum_probs=95.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++|||++|.||.++.+.|.++|++|+.+.|.                   .+|++|.+.+.+++++.     ++|++|
T Consensus         1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~-------------------~~dl~d~~~~~~~~~~~-----~pd~Vi   56 (286)
T PF04321_consen    1 MRILITGASGFLGSALARALKERGYEVIATSRS-------------------DLDLTDPEAVAKLLEAF-----KPDVVI   56 (286)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTT-------------------CS-TTSHHHHHHHHHHH-------SEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCch-------------------hcCCCCHHHHHHHHHHh-----CCCeEe
Confidence            469999999999999999999999999998776                   57999999999998876     799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~~~~~~~~~  182 (255)
                      |+|+...       .+...+..+..+.+|+.++..+++.+..     .+.++|++||.......    ..+.....|.+.
T Consensus        57 n~aa~~~-------~~~ce~~p~~a~~iN~~~~~~la~~~~~-----~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   57 NCAAYTN-------VDACEKNPEEAYAINVDATKNLAEACKE-----RGARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             E-------------HHHHHHSHHHHHHHHTHHHHHHHHHHHH-----CT-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             ccceeec-------HHhhhhChhhhHHHhhHHHHHHHHHHHH-----cCCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            9976543       1223455677899999999999999864     34689999965433221    223334456788


Q ss_pred             cccchHHHHHHHHH
Q 025252          183 YGVSKFGILGLVKS  196 (255)
Q Consensus       183 Y~asKaa~~~~~~~  196 (255)
                      |+.+|...|..++.
T Consensus       125 YG~~K~~~E~~v~~  138 (286)
T PF04321_consen  125 YGRSKLEGEQAVRA  138 (286)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHH
Confidence            99999999987776

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.41  E-value=2.3e-12  Score=109.80  Aligned_cols=148  Identities=11%  Similarity=0.101  Sum_probs=102.5

Q ss_pred             EEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEcC
Q 025252           30 IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSG  109 (255)
Q Consensus        30 lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~a  109 (255)
                      +||||+|.||..+++.|+++|++|+++.+.                  ..+|+++.++++++++..     ++|++||+|
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~A   57 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH------------------KELDLTRQADVEAFFAKE-----KPTYVILAA   57 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEee
Confidence            699999999999999999999988765432                  248999999988887763     689999997


Q ss_pred             CCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---c-C----cCCCCCc
Q 025252          110 CNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---E-G----LCNIPAN  181 (255)
Q Consensus       110 ~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~-~----~~~~~~~  181 (255)
                      +.....      ....+..+..+++|+.++..+++++...    +.+++|++||.........   . .    ....|..
T Consensus        58 ~~~~~~------~~~~~~~~~~~~~n~~~~~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~  127 (306)
T PLN02725         58 AKVGGI------HANMTYPADFIRENLQIQTNVIDAAYRH----GVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN  127 (306)
T ss_pred             eeeccc------chhhhCcHHHHHHHhHHHHHHHHHHHHc----CCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence            653210      0011233456788999999999888642    3457899887644321100   0 0    0122322


Q ss_pred             -ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          182 -YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       182 -~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       .|+.||.+.+.+.+.+.++   .++++..+.|
T Consensus       128 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~~R~  157 (306)
T PLN02725        128 EWYAIAKIAGIKMCQAYRIQ---YGWDAISGMP  157 (306)
T ss_pred             chHHHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence             4999999999888877665   3666666665

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.41  E-value=9.6e-12  Score=106.68  Aligned_cols=172  Identities=17%  Similarity=0.122  Sum_probs=120.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+++||||+|.+|+.++++|.+++  .++.+++..+....-..+..  ....+..+++|+.+..++.++++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            56789999999999999999999998  78999988765211111111  24688899999999998877766       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc--------
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI--------  172 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~--------  172 (255)
                      +. .++|+|....       ...-..+.+..+++|+.++-+++.++..    .+-.++|++||......+..        
T Consensus        76 ~~-~Vvh~aa~~~-------~~~~~~~~~~~~~vNV~gT~nvi~~c~~----~~v~~lIYtSs~~Vvf~g~~~~n~~E~~  143 (361)
T KOG1430|consen   76 GA-VVVHCAASPV-------PDFVENDRDLAMRVNVNGTLNVIEACKE----LGVKRLIYTSSAYVVFGGEPIINGDESL  143 (361)
T ss_pred             Cc-eEEEeccccC-------ccccccchhhheeecchhHHHHHHHHHH----hCCCEEEEecCceEEeCCeecccCCCCC
Confidence            55 6666632221       1222235678899999999999988865    35678999996653332221        


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      +.+ ......|+.||+-.|.+++..+.   ..+.+-.++.| .++-.+
T Consensus       144 p~p-~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~-~~IYGp  186 (361)
T KOG1430|consen  144 PYP-LKHIDPYGESKALAEKLVLEANG---SDDLYTCALRP-PGIYGP  186 (361)
T ss_pred             CCc-cccccccchHHHHHHHHHHHhcC---CCCeeEEEEcc-ccccCC
Confidence            111 12225799999999998887775   34577777877 555443

>PLN02778 3,5-epimerase/4-reductase

Probab=99.40  E-value=6.2e-12  Score=107.15  Aligned_cols=145  Identities=18%  Similarity=0.137  Sum_probs=94.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|.||+.++++|.++|++|+...                      .|+++.+.+...+++.     ++|++|
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~----------------------~~~~~~~~v~~~l~~~-----~~D~Vi   62 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS----------------------GRLENRASLEADIDAV-----KPTHVF   62 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec----------------------CccCCHHHHHHHHHhc-----CCCEEE
Confidence            5699999999999999999999999987432                      2445555555555432     689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCC-Cccc------c--cc-cCcC
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTG-TTAC------T--EI-EGLC  176 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~-~~~~------~--~~-~~~~  176 (255)
                      |+|+..+..    ..+...+.....+++|+.++.++++++...    +-.++++.|+.. ....      .  .. ...+
T Consensus        63 H~Aa~~~~~----~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~----gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         63 NAAGVTGRP----NVDWCESHKVETIRANVVGTLTLADVCRER----GLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             ECCcccCCC----CchhhhhCHHHHHHHHHHHHHHHHHHHHHh----CCCEEEEecceEeCCCCCCCcccCCCCCcCCCC
Confidence            998755311    111123455778999999999999998653    223455444321 1110      0  01 1122


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEe
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVD  209 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  209 (255)
                      ..|.+.|+.||.+.+.+++.++..   .++|+.
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~~  164 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYENV---CTLRVR  164 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhcc---EEeeec
Confidence            223478999999999998876533   455653

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.38  E-value=2.4e-11  Score=101.66  Aligned_cols=182  Identities=14%  Similarity=0.135  Sum_probs=137.2

Q ss_pred             cCeEEEEecC-CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC--
Q 025252           25 QGRVAIITGG-ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK--  101 (255)
Q Consensus        25 ~~k~~lVtGa-s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~--  101 (255)
                      +.++|+|.|. +.-|++.+|..|-++|+-|+++..+.+..+.+.++. ...+.+...|..++.++...+.+..+....  
T Consensus         2 R~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~   80 (299)
T PF08643_consen    2 RKEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED-RPDIRPLWLDDSDPSSIHASLSRFASLLSRPH   80 (299)
T ss_pred             ceeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhcCCC
Confidence            3467889996 689999999999999999999999988777777665 456888889998888888887777765432  


Q ss_pred             ------------ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC--CCCcEEEec-cCCC
Q 025252          102 ------------LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR--RRGCILYTT-GTGT  166 (255)
Q Consensus       102 ------------id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is-~~~~  166 (255)
                                  +..+|..- ...+ ..++++.++.+.|.+.++.|+..++..++.++|++..+  ++.+||... |...
T Consensus        81 ~p~~~~~~h~l~L~svi~~P-sl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~s  158 (299)
T PF08643_consen   81 VPFPGAPPHHLQLKSVIFIP-SLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCceeEEEEEEEec-CCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhh
Confidence                        23333320 1112 24788899999999999999999999999999999762  355565544 2221


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      +    ...+.   ++.-.+...++.++++.|.+|++++||.|..+.. |.+
T Consensus       159 s----l~~Pf---hspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~L-G~l  201 (299)
T PF08643_consen  159 S----LNPPF---HSPESIVSSALSSFFTSLRRELRPHNIDVTQIKL-GNL  201 (299)
T ss_pred             c----cCCCc---cCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEe-eee
Confidence            1    11111   2446788999999999999999999999999997 443

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.38  E-value=8.1e-12  Score=103.62  Aligned_cols=133  Identities=23%  Similarity=0.299  Sum_probs=105.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      ++|||++|-+|.++.+.|. .+++|+.+++.+                   +|++|++.+.+++++.     ++|++||+
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-------------------~Ditd~~~v~~~i~~~-----~PDvVIn~   57 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE-------------------LDITDPDAVLEVIRET-----RPDVVINA   57 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc-------------------ccccChHHHHHHHHhh-----CCCEEEEC
Confidence            9999999999999999998 678999888754                   7999999999999987     89999999


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc----cccccCcCCCCCcccc
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA----CTEIEGLCNIPANYYG  184 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~----~~~~~~~~~~~~~~Y~  184 (255)
                      |....       .+....+.+.-+.+|..++.++.+++-..     +..+|++|+-....    .+..+.....|.+.|+
T Consensus        58 AAyt~-------vD~aE~~~e~A~~vNa~~~~~lA~aa~~~-----ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG  125 (281)
T COG1091          58 AAYTA-------VDKAESEPELAFAVNATGAENLARAAAEV-----GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYG  125 (281)
T ss_pred             ccccc-------cccccCCHHHHHHhHHHHHHHHHHHHHHh-----CCeEEEeecceEecCCCCCCCCCCCCCCChhhhh
Confidence            76554       34455667888999999999999999643     46788999432211    1233445556778899


Q ss_pred             cchHHHHHHHHHHH
Q 025252          185 VSKFGILGLVKSLA  198 (255)
Q Consensus       185 asKaa~~~~~~~la  198 (255)
                      .||.+.|..++...
T Consensus       126 ~sKl~GE~~v~~~~  139 (281)
T COG1091         126 RSKLAGEEAVRAAG  139 (281)
T ss_pred             HHHHHHHHHHHHhC
Confidence            99999998877654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.4e-11  Score=115.80  Aligned_cols=162  Identities=20%  Similarity=0.136  Sum_probs=107.7

Q ss_pred             EEEEecCCChHHHHHHHHHH--HcCCEEEEEecCcch--HHHHHHHhCCCceEEEEeeCCCHHHH--HHHHHHHHHHcCC
Q 025252           28 VAIITGGASGIGASAAQLFH--KNGAKVVIADVQDNL--GQALADKLGHQDVCYIHCDVSNEREV--INLVDTTVAKFGK  101 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~--~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~--~~~~~~~~~~~g~  101 (255)
                      +++||||+|.||++++++|+  +.|++|++++|+...  ..++.......++.++.+|++|++..  .+.++++    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  589999999996532  22222222224688999999985310  1112222    37


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc---C---c
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE---G---L  175 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~---~---~  175 (255)
                      +|++||+|+....       ..   ......++|+.++.++++.+..    .+..+++++||.+........   .   .
T Consensus        78 ~D~Vih~Aa~~~~-------~~---~~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         78 IDHVVHLAAIYDL-------TA---DEEAQRAANVDGTRNVVELAER----LQAATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCEEEECceeecC-------CC---CHHHHHHHHhHHHHHHHHHHHh----cCCCeEEEEeccccccCccCccccccchh
Confidence            9999999765431       11   2345678899999888887753    334679999876543211100   0   0


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...+...|+.||...+.+.+.      ..|+++..+.|
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp  175 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRP  175 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcC
Confidence            111235699999999987752      24788888888

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.36  E-value=3.6e-11  Score=102.38  Aligned_cols=163  Identities=19%  Similarity=0.210  Sum_probs=112.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcc---hHHHHHHHh---------CCCceEEEEeeCCCH------HH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDN---LGQALADKL---------GHQDVCYIHCDVSNE------RE   87 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~---~~~~~~~~~---------~~~~~~~~~~D~~~~------~~   87 (255)
                      +++++|||||.+|+-+++.|+.+- .+|++..|-++   ..+++.+.+         ..+++.++.+|++.+      ..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            469999999999999999998865 58999887654   233333222         236899999999953      33


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCc-EEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGC-ILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-ii~is~~~~  166 (255)
                      .+++.+       .+|.++|||....+.          ..+.+....|+.|+..+++.+.     .++++ +.++||++.
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v----------~pYs~L~~~NVlGT~evlrLa~-----~gk~Kp~~yVSsisv  138 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHV----------FPYSELRGANVLGTAEVLRLAA-----TGKPKPLHYVSSISV  138 (382)
T ss_pred             HHHHhh-------hcceEEecchhhccc----------CcHHHhcCcchHhHHHHHHHHh-----cCCCceeEEEeeeee
Confidence            333333       689999996554421          2345566789999999998885     23334 889997764


Q ss_pred             cccccccC-------------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCc
Q 025252          167 TACTEIEG-------------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY  215 (255)
Q Consensus       167 ~~~~~~~~-------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~  215 (255)
                      ........             ....+...|+-||++.|.+++....    +|++|..+.||.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~----rGLpv~I~Rpg~  196 (382)
T COG3320         139 GETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGD----RGLPVTIFRPGY  196 (382)
T ss_pred             ccccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhh----cCCCeEEEecCe
Confidence            43322211             1123347799999999876655444    699999999944

>PLN02996 fatty acyl-CoA reductase

Probab=99.35  E-value=1.9e-11  Score=110.86  Aligned_cols=124  Identities=19%  Similarity=0.268  Sum_probs=85.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC---CEEEEEecCcch---HHHHHHH-------------hC-------CCceEE
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG---AKVVIADVQDNL---GQALADK-------------LG-------HQDVCY   77 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g---~~v~~~~r~~~~---~~~~~~~-------------~~-------~~~~~~   77 (255)
                      +++|+++||||||.||..+++.|++.+   .+|+++.|....   .+.+..+             .+       ..++.+
T Consensus         9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~   88 (491)
T PLN02996          9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP   88 (491)
T ss_pred             hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence            689999999999999999999999864   357888776431   1111111             00       147899


Q ss_pred             EEeeCCCH-------HHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh
Q 025252           78 IHCDVSNE-------REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM  150 (255)
Q Consensus        78 ~~~D~~~~-------~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  150 (255)
                      +.+|++++       +..+++++       ++|++||+|+....          .+..+..+++|+.++.++++.+... 
T Consensus        89 i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~----------~~~~~~~~~~Nv~gt~~ll~~a~~~-  150 (491)
T PLN02996         89 VPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF----------DERYDVALGINTLGALNVLNFAKKC-  150 (491)
T ss_pred             EecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC----------cCCHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99999843       33333333       68999999765431          1245678899999999999888642 


Q ss_pred             cCCCCCcEEEeccCCCc
Q 025252          151 VPRRRGCILYTTGTGTT  167 (255)
Q Consensus       151 ~~~~~~~ii~is~~~~~  167 (255)
                        .+-.+++++||....
T Consensus       151 --~~~k~~V~vST~~vy  165 (491)
T PLN02996        151 --VKVKMLLHVSTAYVC  165 (491)
T ss_pred             --CCCCeEEEEeeeEEe
Confidence              123478888866433

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.33  E-value=5e-11  Score=94.07  Aligned_cols=147  Identities=14%  Similarity=0.085  Sum_probs=100.4

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      |+|+||||.+|+.++++|+++|++|+++.|+++..++      ..++.++.+|+.|++++.++++       +.|++|++
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~~   67 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED------SPGVEIIQGDLFDPDSVKAALK-------GADAVIHA   67 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEEC
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc------ccccccceeeehhhhhhhhhhh-------hcchhhhh
Confidence            6899999999999999999999999999999887665      4689999999999988877766       78999997


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC-CCC-Ccccccc
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC-NIP-ANYYGVS  186 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~-~~~-~~~Y~as  186 (255)
                      .+...          .  +            ...++.+++.+++.+..+++++|+.+........... ..+ ...|...
T Consensus        68 ~~~~~----------~--~------------~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (183)
T PF13460_consen   68 AGPPP----------K--D------------VDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARD  123 (183)
T ss_dssp             CHSTT----------T--H------------HHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHH
T ss_pred             hhhhc----------c--c------------ccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHH
Confidence            54322          1  1            3344566666666677789999976644322211000 000 0124444


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      |...+.+.       ...+++...+.|+.....
T Consensus       124 ~~~~e~~~-------~~~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen  124 KREAEEAL-------RESGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             HHHHHHHH-------HHSTSEEEEEEESEEEBT
T ss_pred             HHHHHHHH-------HhcCCCEEEEECcEeEeC
Confidence            44333222       335899999999554443

...

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=7e-11  Score=96.58  Aligned_cols=177  Identities=16%  Similarity=0.138  Sum_probs=128.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHh---CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKL---GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++|+++|||-||-=|.-+++.|+++|++|+.+.|.......-.   -+.   ...+++.+.+|++|...+.++++++   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            3689999999999999999999999999999888743322111   111   1235888999999999999999988   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc----cccccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA----CTEIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~----~~~~~~  174 (255)
                        .+|-+.|.|+       +++...|.+..+...+++-.|+++++.++.-+-  .++-++---||+...+    .+....
T Consensus        78 --~PdEIYNLaA-------QS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~~~rfYQAStSE~fG~v~~~pq~E~  146 (345)
T COG1089          78 --QPDEIYNLAA-------QSHVGVSFEQPEYTADVDAIGTLRLLEAIRILG--EKKTRFYQASTSELYGLVQEIPQKET  146 (345)
T ss_pred             --Cchhheeccc-------cccccccccCcceeeeechhHHHHHHHHHHHhC--CcccEEEecccHHhhcCcccCccccC
Confidence              7899988654       455678888999999999999999998875432  2234455444332222    122234


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhc---ccCcEEeEeccCc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELG---RYGIRVDCVSHTY  215 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~p~~  215 (255)
                      .+..|.++|+++|....=.+......+.   -.||-.|-=+|..
T Consensus       147 TPFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~R  190 (345)
T COG1089         147 TPFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLR  190 (345)
T ss_pred             CCCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCC
Confidence            5567889999999888877777776643   3466666667744

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.24  E-value=2e-10  Score=108.24  Aligned_cols=149  Identities=14%  Similarity=0.086  Sum_probs=100.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ..++++||||+|.||+++++.|.++|++|..                      ...|++|.+.+++.+++.     ++|+
T Consensus       379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~----------------------~~~~l~d~~~v~~~i~~~-----~pd~  431 (668)
T PLN02260        379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEY----------------------GKGRLEDRSSLLADIRNV-----KPTH  431 (668)
T ss_pred             CCceEEEECCCchHHHHHHHHHHhCCCeEEe----------------------eccccccHHHHHHHHHhh-----CCCE
Confidence            3457999999999999999999999988732                      114678888887776654     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc----------ccccC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC----------TEIEG  174 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~----------~~~~~  174 (255)
                      +||+|+..+.    +..+...++.+..+++|+.++.++++++...    +-. .+++||......          +..+.
T Consensus       432 Vih~Aa~~~~----~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~----g~~-~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        432 VFNAAGVTGR----PNVDWCESHKVETIRANVVGTLTLADVCREN----GLL-MMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             EEECCcccCC----CCCChHHhCHHHHHHHHhHHHHHHHHHHHHc----CCe-EEEEcccceecCCcccccccCCCCCcC
Confidence            9999865431    1122334566788999999999999999753    223 444443322211          00111


Q ss_pred             -cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEec
Q 025252          175 -LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS  212 (255)
Q Consensus       175 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  212 (255)
                       ....+.+.|+.||.+.+.+++.+..   ...+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~---~~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDN---VCTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhh---heEEEEEEec
Confidence             1122347899999999999877642   2566776665

>PRK05865 hypothetical protein; Provisional

Probab=99.24  E-value=1.9e-10  Score=109.11  Aligned_cols=102  Identities=18%  Similarity=0.179  Sum_probs=80.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+++|++|++++|+....      . ..++.++.+|++|.+++.++++       ++|++||
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~------~-~~~v~~v~gDL~D~~~l~~al~-------~vD~VVH   67 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS------W-PSSADFIAADIRDATAVESAMT-------GADVVAH   67 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh------c-ccCceEEEeeCCCHHHHHHHHh-------CCCEEEE
Confidence            599999999999999999999999999999875321      1 1357789999999999887765       5899999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEecc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG  163 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~  163 (255)
                      +|+...          .      .+++|+.++.++++++.    +.+.+++|++||
T Consensus        68 lAa~~~----------~------~~~vNv~GT~nLLeAa~----~~gvkr~V~iSS  103 (854)
T PRK05865         68 CAWVRG----------R------NDHINIDGTANVLKAMA----ETGTGRIVFTSS  103 (854)
T ss_pred             CCCccc----------c------hHHHHHHHHHHHHHHHH----HcCCCeEEEECC
Confidence            875321          0      35789999888777664    344568999984

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.20  E-value=3.1e-10  Score=102.17  Aligned_cols=160  Identities=20%  Similarity=0.188  Sum_probs=112.1

Q ss_pred             CeEEE----EecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           26 GRVAI----ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        26 ~k~~l----VtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +..++    |+||++|+|.++++.+...|++|+.+.+.+.....                               ....+
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-------------------------------~~~~~   82 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-------------------------------GWGDR   82 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccccc-------------------------------CcCCc
Confidence            44555    88889999999999999999999987665441100                               00014


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ++.++.-+-.        +  .+.+++.        +.+...+.+++.|.  ..|+|+++++....    ..      ..
T Consensus        83 ~~~~~~d~~~--------~--~~~~~l~--------~~~~~~~~~l~~l~--~~griv~i~s~~~~----~~------~~  132 (450)
T PRK08261         83 FGALVFDATG--------I--TDPADLK--------ALYEFFHPVLRSLA--PCGRVVVLGRPPEA----AA------DP  132 (450)
T ss_pred             ccEEEEECCC--------C--CCHHHHH--------HHHHHHHHHHHhcc--CCCEEEEEcccccc----CC------ch
Confidence            5544431100        0  1222222        33456777888874  45799999854321    11      13


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhHhHHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~~~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .|+++|+++.++++.+++|+ +++++++++.| ...    -+++++..+.|+  .++.+.+++|+.+.++++.
T Consensus       133 ~~~~akaal~gl~rsla~E~-~~gi~v~~i~~-~~~----~~~~~~~~~~~l--~s~~~a~~~g~~i~~~~~~  197 (450)
T PRK08261        133 AAAAAQRALEGFTRSLGKEL-RRGATAQLVYV-APG----AEAGLESTLRFF--LSPRSAYVSGQVVRVGAAD  197 (450)
T ss_pred             HHHHHHHHHHHHHHHHHHHh-hcCCEEEEEec-CCC----CHHHHHHHHHHh--cCCccCCccCcEEEecCCc
Confidence            49999999999999999999 77999999999 441    167888888888  8888999999999999874

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.14  E-value=6.5e-10  Score=90.93  Aligned_cols=168  Identities=19%  Similarity=0.157  Sum_probs=116.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH-HHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA-DKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ...+...+++++||||+|+||..+++.|..+|+.|++++.-....++.. -.....++..+.-|+..+     ++.    
T Consensus        20 ~~~~p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~----   90 (350)
T KOG1429|consen   20 EQVKPSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK----   90 (350)
T ss_pred             hcccCCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH----
Confidence            3445567899999999999999999999999999999987655443332 233345677777777655     333    


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC---
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG---  174 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~---  174 (255)
                         .+|.++|.|+..+...+.       ....+++.+|+.++.+++..+...     +.|++..|++..+..+..-.   
T Consensus        91 ---evD~IyhLAapasp~~y~-------~npvktIktN~igtln~lglakrv-----~aR~l~aSTseVYgdp~~hpq~e  155 (350)
T KOG1429|consen   91 ---EVDQIYHLAAPASPPHYK-------YNPVKTIKTNVIGTLNMLGLAKRV-----GARFLLASTSEVYGDPLVHPQVE  155 (350)
T ss_pred             ---HhhhhhhhccCCCCcccc-------cCccceeeecchhhHHHHHHHHHh-----CceEEEeecccccCCcccCCCcc
Confidence               568888887665533321       223567889999999998888543     35677777554444321111   


Q ss_pred             ------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 ------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                            .+-.|.++|...|.+.+.|+....++   .||.|....+
T Consensus       156 ~ywg~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRi  197 (350)
T KOG1429|consen  156 TYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARI  197 (350)
T ss_pred             ccccccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEee
Confidence                  12246788999999999998888876   7776655543

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.12  E-value=3.8e-09  Score=107.16  Aligned_cols=171  Identities=16%  Similarity=0.142  Sum_probs=110.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC----CEEEEEecCcchHH---HHHHHhC---------CCceEEEEeeCCCHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG----AKVVIADVQDNLGQ---ALADKLG---------HQDVCYIHCDVSNEREV   88 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g----~~v~~~~r~~~~~~---~~~~~~~---------~~~~~~~~~D~~~~~~~   88 (255)
                      ..++++|||++|.+|..++++|++++    .+|+...|......   .+.+...         ..++.++.+|++++.--
T Consensus       970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lg 1049 (1389)
T TIGR03443       970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFG 1049 (1389)
T ss_pred             CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCC
Confidence            35789999999999999999999887    78888888754322   2221110         13688999999865210


Q ss_pred             --HHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC
Q 025252           89 --INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT  166 (255)
Q Consensus        89 --~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~  166 (255)
                        ...++++.   ..+|++||+|+....       ..+   +......|+.++.++++.+..    .+..+++++||.+.
T Consensus      1050 l~~~~~~~l~---~~~d~iiH~Aa~~~~-------~~~---~~~~~~~nv~gt~~ll~~a~~----~~~~~~v~vSS~~v 1112 (1389)
T TIGR03443      1050 LSDEKWSDLT---NEVDVIIHNGALVHW-------VYP---YSKLRDANVIGTINVLNLCAE----GKAKQFSFVSSTSA 1112 (1389)
T ss_pred             cCHHHHHHHH---hcCCEEEECCcEecC-------ccC---HHHHHHhHHHHHHHHHHHHHh----CCCceEEEEeCeee
Confidence              11122222   378999999765431       112   334456799999999988753    23457999997654


Q ss_pred             ccccc---------------cc------CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          167 TACTE---------------IE------GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       167 ~~~~~---------------~~------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      .....               .+      .....+...|+.||.+.+.+++..+.    .|+++..+.| +.+
T Consensus      1113 ~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rp-g~v 1179 (1389)
T TIGR03443      1113 LDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRP-GYV 1179 (1389)
T ss_pred             cCcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECC-Ccc
Confidence            32100               00      00111235699999999998876433    4889999988 444

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.12  E-value=2.3e-09  Score=98.71  Aligned_cols=122  Identities=15%  Similarity=0.232  Sum_probs=85.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC---EEEEEecCcch---HHHHHHHh-------------C-------CCceEE
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA---KVVIADVQDNL---GQALADKL-------------G-------HQDVCY   77 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~~~~---~~~~~~~~-------------~-------~~~~~~   77 (255)
                      +++|+++||||||.||..+++.|++.+.   +|+++.|....   .+.+.+++             +       ..++.+
T Consensus       117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~  196 (605)
T PLN02503        117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVP  196 (605)
T ss_pred             hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEE
Confidence            5799999999999999999999998653   67888775432   22221111             1       246889


Q ss_pred             EEeeCCCHH------HHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc
Q 025252           78 IHCDVSNER------EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV  151 (255)
Q Consensus        78 ~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~  151 (255)
                      +.+|+++++      ..+.+.       ..+|++||+|+...      +    .+.++..+++|+.++.++++.+...  
T Consensus       197 v~GDl~d~~LGLs~~~~~~L~-------~~vDiVIH~AA~v~------f----~~~~~~a~~vNV~GT~nLLelA~~~--  257 (605)
T PLN02503        197 VVGNVCESNLGLEPDLADEIA-------KEVDVIINSAANTT------F----DERYDVAIDINTRGPCHLMSFAKKC--  257 (605)
T ss_pred             EEeeCCCcccCCCHHHHHHHH-------hcCCEEEECccccc------c----ccCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            999999873      232222       16999999876543      1    1346778899999999999988643  


Q ss_pred             CCCCCcEEEeccCC
Q 025252          152 PRRRGCILYTTGTG  165 (255)
Q Consensus       152 ~~~~~~ii~is~~~  165 (255)
                       ....+++++|+..
T Consensus       258 -~~lk~fV~vSTay  270 (605)
T PLN02503        258 -KKLKLFLQVSTAY  270 (605)
T ss_pred             -CCCCeEEEccCce
Confidence             1234688888654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.11  E-value=9.5e-10  Score=86.37  Aligned_cols=168  Identities=11%  Similarity=0.098  Sum_probs=110.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++++||||+ |+|.++++.|++.|++|++.+|+.+..+++...++ ..++.++.+|++|+++++++++.+.+.++++|++
T Consensus         1 m~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          1 MHALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             CEEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            368999998 67778999999999999999998777666655443 2468888999999999999999999888999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      |+..  .                       +.++-.+..++-+.=.+.+.-+++.+=++.++.          |      
T Consensus        80 v~~v--h-----------------------~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~----------~------  118 (177)
T PRK08309         80 VAWI--H-----------------------SSAKDALSVVCRELDGSSETYRLFHVLGSAASD----------P------  118 (177)
T ss_pred             EEec--c-----------------------ccchhhHHHHHHHHccCCCCceEEEEeCCcCCc----------h------
Confidence            9742  1                       112222334443332222333566544221110          0      


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---Hh--HHhhhhhhhhhhccCCCCCeeecee
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---EA--IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---~~--~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                               +..+..+....+.-.-|.. |++.+.   ++  -+|+++-+..-+ .++...++.|++
T Consensus       119 ---------~~~~~~~~~~~~~~~~i~l-gf~~~~~~~rwlt~~ei~~gv~~~~-~~~~~~~~~g~~  174 (177)
T PRK08309        119 ---------RIPSEKIGPARCSYRRVIL-GFVLEDTYSRWLTHEEISDGVIKAI-ESDADEHVVGTV  174 (177)
T ss_pred             ---------hhhhhhhhhcCCceEEEEE-eEEEeCCccccCchHHHHHHHHHHH-hcCCCeEEEEEe
Confidence                     1122223334455666777 666554   33  677777666553 567888888875

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.07  E-value=3.6e-08  Score=74.40  Aligned_cols=203  Identities=16%  Similarity=0.132  Sum_probs=132.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~id  103 (255)
                      -.+++|-|+-+.+|.+++..|-.++|-|.-++..+....        +.-..+..|-+=.++-+.+++++.+..  .++|
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A--------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekvD   74 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA--------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVD   74 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc--------cceEEecCCcchhHHHHHHHHHHHHhhcccccc
Confidence            356899999999999999999999999888877654321        233445555555677777888877654  3699


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      .+++-||...-..-. -. .-....+-|+...+.....-.+.+..+++  .+| ++-+.+   ...+..+.++.   ..|
T Consensus        75 av~CVAGGWAGGnAk-sK-dl~KNaDLMwKQSvwtSaIsa~lAt~HLK--~GG-LL~LtG---AkaAl~gTPgM---IGY  143 (236)
T KOG4022|consen   75 AVFCVAGGWAGGNAK-SK-DLVKNADLMWKQSVWTSAISAKLATTHLK--PGG-LLQLTG---AKAALGGTPGM---IGY  143 (236)
T ss_pred             eEEEeeccccCCCcc-hh-hhhhchhhHHHHHHHHHHHHHHHHHhccC--CCc-eeeecc---cccccCCCCcc---cch
Confidence            998875443321111 00 11223445566666666656666667763  334 444443   33334445555   669


Q ss_pred             ccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhh---------Hh-----HHhhhhhhhhhhccCCCCCeeecee
Q 025252          184 GVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMA---------EA-----IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~---------~~-----~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      +++|+|+.+++++|+.+-.  +.|--+.+|.| -..|||         ++     .+++++...-+  ..+...--+|..
T Consensus       144 GMAKaAVHqLt~SLaak~SGlP~gsaa~~ilP-VTLDTPMNRKwMP~ADfssWTPL~fi~e~flkW--tt~~~RPssGsL  220 (236)
T KOG4022|consen  144 GMAKAAVHQLTSSLAAKDSGLPDGSAALTILP-VTLDTPMNRKWMPNADFSSWTPLSFISEHFLKW--TTETSRPSSGSL  220 (236)
T ss_pred             hHHHHHHHHHHHHhcccccCCCCCceeEEEee-eeccCccccccCCCCcccCcccHHHHHHHHHHH--hccCCCCCCCce
Confidence            9999999999999999753  34667888888 777887         11     56666666655  445555556666


Q ss_pred             EEe
Q 025252          248 LLV  250 (255)
Q Consensus       248 i~~  250 (255)
                      +.+
T Consensus       221 lqi  223 (236)
T KOG4022|consen  221 LQI  223 (236)
T ss_pred             EEE
Confidence            554

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.06  E-value=6.5e-10  Score=90.81  Aligned_cols=101  Identities=17%  Similarity=0.192  Sum_probs=76.0

Q ss_pred             EEEEecC-CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGG-ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGa-s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +=.||.. +||||+++|++|+++|++|+++++....        ...  ....+|+++.++++++++.+.+.++++|++|
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l--------~~~--~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLV   85 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRAL--------KPE--PHPNLSIREIETTKDLLITLKELVQEHDILI   85 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhhc--------ccc--cCCcceeecHHHHHHHHHHHHHHcCCCCEEE
Confidence            3445554 6799999999999999999998763211        000  1245899999999999999999999999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                      |||+...   +.++.+.+.++|++++..   +.|...+
T Consensus        86 nnAgv~d---~~~~~~~s~e~~~~~~~~---~~~~~~~  117 (227)
T TIGR02114        86 HSMAVSD---YTPVYMTDLEQVQASDNL---NEFLSKQ  117 (227)
T ss_pred             ECCEecc---ccchhhCCHHHHhhhcch---hhhhccc
Confidence            9987643   356777888999988544   4455554

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN00016 RNA-binding protein; Provisional

Probab=99.05  E-value=6.2e-09  Score=91.65  Aligned_cols=148  Identities=14%  Similarity=0.138  Sum_probs=89.1

Q ss_pred             ecCeEEEEe----cCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH-------HHhCCCceEEEEeeCCCHHHHHHHH
Q 025252           24 LQGRVAIIT----GGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA-------DKLGHQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        24 ~~~k~~lVt----Gas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      ...++++||    ||+|.||..++++|+++|++|++++|+........       .++...++.++.+|++|   +++++
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~~  126 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSKV  126 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhhh
Confidence            345789999    99999999999999999999999999875432211       12222357888999865   33333


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +     ..++|++||+++.            ..           .++..++++    .++.+-.++|++||.+.......
T Consensus       127 ~-----~~~~d~Vi~~~~~------------~~-----------~~~~~ll~a----a~~~gvkr~V~~SS~~vyg~~~~  174 (378)
T PLN00016        127 A-----GAGFDVVYDNNGK------------DL-----------DEVEPVADW----AKSPGLKQFLFCSSAGVYKKSDE  174 (378)
T ss_pred             c-----cCCccEEEeCCCC------------CH-----------HHHHHHHHH----HHHcCCCEEEEEccHhhcCCCCC
Confidence            2     1368999996431            01           122233343    33445568999997654432110


Q ss_pred             -cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          173 -EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       173 -~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                       +.....+...+. +|...+.+.+       ..++.+..+.|+
T Consensus       175 ~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~  209 (378)
T PLN00016        175 PPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQ  209 (378)
T ss_pred             CCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEece
Confidence             111111112222 7887776543       246777777773

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.05  E-value=1.2e-09  Score=89.41  Aligned_cols=169  Identities=19%  Similarity=0.204  Sum_probs=116.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcC--CEEEEEec---CcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNG--AKVVIADV---QDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .|.++|||+.+.||...+..+...-  ++.+..+.   ... ++.+.+.....+..+++.|+.+...+...+..     .
T Consensus         6 ~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~-----~   79 (331)
T KOG0747|consen    6 EKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET-----E   79 (331)
T ss_pred             cceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc-----C
Confidence            3789999999999999999998863  33333322   122 22222222336899999999999887776654     4


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----c-cCc
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----I-EGL  175 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~-~~~  175 (255)
                      .+|.++|.|....       .+.+.-+-....+.|+.++..+++.+....   +-.++|++|+....+...    . ...
T Consensus        80 ~id~vihfaa~t~-------vd~s~~~~~~~~~nnil~t~~Lle~~~~sg---~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   80 EIDTVIHFAAQTH-------VDRSFGDSFEFTKNNILSTHVLLEAVRVSG---NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             chhhhhhhHhhhh-------hhhhcCchHHHhcCCchhhhhHHHHHHhcc---CeeEEEEecccceecCccccccccccc
Confidence            8999999754333       233444455678899999999999987664   346799999554332211    1 223


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...|.++|++||+|.+++++++.+.   +|+.|..+..
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~s---y~lpvv~~R~  184 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRS---YGLPVVTTRM  184 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhc---cCCcEEEEec
Confidence            3356688999999999999999988   5655555543

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.03  E-value=6.9e-09  Score=87.73  Aligned_cols=73  Identities=12%  Similarity=0.157  Sum_probs=59.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC-ccEEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK-LDILVN  107 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-id~li~  107 (255)
                      ++||||||.+|+.++++|.++|++|.++.|+++...       ..++..+.+|++|++++.++++.. +...+ +|.+++
T Consensus         2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v~~   73 (285)
T TIGR03649         2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------GPNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAVYL   73 (285)
T ss_pred             EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------CCCCccccccCCCHHHHHHHHhcc-cCcCCceeEEEE
Confidence            899999999999999999999999999999976432       135667789999999999888643 22235 899988


Q ss_pred             cC
Q 025252          108 SG  109 (255)
Q Consensus       108 ~a  109 (255)
                      ++
T Consensus        74 ~~   75 (285)
T TIGR03649        74 VA   75 (285)
T ss_pred             eC
Confidence            64

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=98.98  E-value=9e-09  Score=86.94  Aligned_cols=99  Identities=15%  Similarity=0.070  Sum_probs=66.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      ++||||+|.||.++++.|+++|++|++++|+.+.......    ..    ..|... ...       .+...++|++||+
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~----~~~~~~-~~~-------~~~~~~~D~Vvh~   64 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW----EG----YKPWAP-LAE-------SEALEGADAVINL   64 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc----ee----eecccc-cch-------hhhcCCCCEEEEC
Confidence            5899999999999999999999999999998765332110    01    112221 111       1233579999998


Q ss_pred             CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 025252          109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus       109 a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                      |+.....     .+.+.+.....+++|+.++.++++++..
T Consensus        65 a~~~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~   99 (292)
T TIGR01777        65 AGEPIAD-----KRWTEERKQEIRDSRIDTTRALVEAIAA   99 (292)
T ss_pred             CCCCccc-----ccCCHHHHHHHHhcccHHHHHHHHHHHh
Confidence            7643211     1233445567889999999888888754

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=98.89  E-value=3.1e-08  Score=81.27  Aligned_cols=71  Identities=14%  Similarity=0.219  Sum_probs=55.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      |+|+||+|.+|+.+++.|++.+++|.++.|+.....  .+++....+..+.+|..|.+++.++++       ++|.++++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~~g~~vv~~d~~~~~~l~~al~-------g~d~v~~~   71 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQALGAEVVEADYDDPESLVAALK-------GVDAVFSV   71 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHHTTTEEEES-TT-HHHHHHHHT-------TCSEEEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhcccceEeecccCCHHHHHHHHc-------CCceEEee
Confidence            689999999999999999999999999999874311  122222356788999999999888877       88999875

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.77  E-value=4.8e-08  Score=86.00  Aligned_cols=81  Identities=26%  Similarity=0.384  Sum_probs=63.0

Q ss_pred             eecCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH
Q 025252           23 RLQGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        23 ~~~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      +++||+++||||                ||++|+++|++|+++|++|++++++.+. .     .. .  ....+|+++.+
T Consensus       185 ~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-----~~-~--~~~~~dv~~~~  255 (399)
T PRK05579        185 DLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-----TP-A--GVKRIDVESAQ  255 (399)
T ss_pred             ccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-----CC-C--CcEEEccCCHH
Confidence            579999999999                4559999999999999999999887531 1     11 1  13468999988


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCcccc
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEYR  115 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~~  115 (255)
                      ++.+.++   +.++++|++||||+...+.
T Consensus       256 ~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        256 EMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHH---HhcCCCCEEEEcccccccc
Confidence            8877765   4568899999998766543

>PRK12320 hypothetical protein; Provisional

Probab=98.75  E-value=1e-07  Score=89.10  Aligned_cols=102  Identities=19%  Similarity=0.195  Sum_probs=75.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|.||+.++++|.++|++|++++|.....       ...++.++.+|++++. +.+++       .++|++||
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~-------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VIH   66 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA-------LDPRVDYVCASLRNPV-LQELA-------GEADAVIH   66 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc-------ccCCceEEEccCCCHH-HHHHh-------cCCCEEEE
Confidence            599999999999999999999999999999865421       1236788999999884 43332       26899999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccC
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT  164 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~  164 (255)
                      .|+...          . +    ..++|+.++.++++++..    .+ .++|++||.
T Consensus        67 LAa~~~----------~-~----~~~vNv~Gt~nLleAA~~----~G-vRiV~~SS~  103 (699)
T PRK12320         67 LAPVDT----------S-A----PGGVGITGLAHVANAAAR----AG-ARLLFVSQA  103 (699)
T ss_pred             cCccCc----------c-c----hhhHHHHHHHHHHHHHHH----cC-CeEEEEECC
Confidence            875321          0 0    114789999888888753    23 368888854

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.73  E-value=4.4e-07  Score=74.49  Aligned_cols=36  Identities=28%  Similarity=0.396  Sum_probs=33.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ   64 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~   64 (255)
                      ++||||||.||++++.+|.+.|++|.++.|++....
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~   36 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKAS   36 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchh
Confidence            589999999999999999999999999999987644

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.61  E-value=1.8e-07  Score=79.33  Aligned_cols=78  Identities=21%  Similarity=0.364  Sum_probs=60.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCc---chHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQD---NLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~---~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++ |.+++|+.   ++.+++.+++..  ..+....+|+++.+++++.++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            467899999999 69999999999999986 99999986   566666665532  234556788887776655444   


Q ss_pred             HHcCCccEEEEc
Q 025252           97 AKFGKLDILVNS  108 (255)
Q Consensus        97 ~~~g~id~li~~  108 (255)
                          ..|++||+
T Consensus       199 ----~~DilINa  206 (289)
T PRK12548        199 ----SSDILVNA  206 (289)
T ss_pred             ----cCCEEEEe
Confidence                56999997

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.59  E-value=4.9e-07  Score=72.19  Aligned_cols=80  Identities=24%  Similarity=0.350  Sum_probs=65.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++++++|+|++|++|+++++.|++.|++|++++|+.++.+++.+.+.. .......+|..+.+++.+.++       
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-------
Confidence            357899999999999999999999999999999999998887777766531 234455678888888776664       


Q ss_pred             CccEEEEc
Q 025252          101 KLDILVNS  108 (255)
Q Consensus       101 ~id~li~~  108 (255)
                      +.|++|++
T Consensus        97 ~~diVi~a  104 (194)
T cd01078          97 GADVVFAA  104 (194)
T ss_pred             cCCEEEEC
Confidence            57999985

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.47  E-value=1.2e-06  Score=71.67  Aligned_cols=100  Identities=18%  Similarity=0.254  Sum_probs=65.6

Q ss_pred             eEEEEecCCCh-HHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASG-IGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~g-iG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .+=.||+.|+| +|+++|++|+++|++|++++|+.....     ....++.++.++  ..++.   .+.+.+.++++|++
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-----~~~~~v~~i~v~--s~~~m---~~~l~~~~~~~Div   85 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-----EPHPNLSIIEIE--NVDDL---LETLEPLVKDHDVL   85 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-----CCCCCeEEEEEe--cHHHH---HHHHHHHhcCCCEE
Confidence            35577766665 999999999999999999987643211     011345555543  22322   23333334579999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhH
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG  139 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~  139 (255)
                      ||||+...   +.+....+.+++.+++++|....
T Consensus        86 Ih~AAvsd---~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         86 IHSMAVSD---YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EeCCccCC---ceehhhhhhhhhhhhhhhhhhhc
Confidence            99987654   34455567888888888876553

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.44  E-value=1.2e-06  Score=77.02  Aligned_cols=113  Identities=18%  Similarity=0.229  Sum_probs=76.3

Q ss_pred             eecCeEEEEecC---------------CCh-HHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH
Q 025252           23 RLQGRVAIITGG---------------ASG-IGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        23 ~~~~k~~lVtGa---------------s~g-iG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      +++||+++||||               |+| +|.++++.|..+|++|+++.++....      .+ .  ....+|+++.+
T Consensus       182 ~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~------~~-~--~~~~~~v~~~~  252 (390)
T TIGR00521       182 DLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL------TP-P--GVKSIKVSTAE  252 (390)
T ss_pred             ccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC------CC-C--CcEEEEeccHH
Confidence            478999999999               566 99999999999999999988765421      11 1  22568999998


Q ss_pred             HH-HHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 025252           87 EV-INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus        87 ~~-~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                      ++ +.++++.   ++++|++|+||+...+...... +.......+.+.+|+..+.-+++.+..
T Consensus       253 ~~~~~~~~~~---~~~~D~~i~~Aavsd~~~~~~~-~~Ki~~~~~~~~l~L~~~pdil~~l~~  311 (390)
T TIGR00521       253 EMLEAALNEL---AKDFDIFISAAAVADFKPKTVF-EGKIKKQGEELSLKLVKNPDIIAEVRK  311 (390)
T ss_pred             HHHHHHHHhh---cccCCEEEEccccccccccccc-cccccccCCceeEEEEeCcHHHHHHHh
Confidence            88 5555443   4689999999877654322111 111111123456777777777776654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.44  E-value=9.1e-06  Score=62.89  Aligned_cols=151  Identities=17%  Similarity=0.082  Sum_probs=101.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++.|.||||-.|..|++...++|++|.++.|++.+....      +.+..++.|+.|++++.+.+.       +.|++|
T Consensus         1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~------~~~~i~q~Difd~~~~a~~l~-------g~DaVI   67 (211)
T COG2910           1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR------QGVTILQKDIFDLTSLASDLA-------GHDAVI   67 (211)
T ss_pred             CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc------ccceeecccccChhhhHhhhc-------CCceEE
Confidence            3588999999999999999999999999999998876432      367789999999998866555       789999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---cCcCCCCCccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EGLCNIPANYY  183 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~~~~~~~~~~Y  183 (255)
                      ..-+...         .+.++.  .        ..-.+.++..++..+..|++.+.+.++....+-   -..+..|...|
T Consensus        68 sA~~~~~---------~~~~~~--~--------~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          68 SAFGAGA---------SDNDEL--H--------SKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             EeccCCC---------CChhHH--H--------HHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            8521110         011111  1        111466677776667889999997764433221   11222343456


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..+++..+.| ..|..|   .++..+-++|
T Consensus       129 ~~A~~~ae~L-~~Lr~~---~~l~WTfvSP  154 (211)
T COG2910         129 PEALAQAEFL-DSLRAE---KSLDWTFVSP  154 (211)
T ss_pred             HHHHHHHHHH-HHHhhc---cCcceEEeCc
Confidence            6666655543 445554   4578888888

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.38  E-value=6.9e-06  Score=68.60  Aligned_cols=69  Identities=17%  Similarity=0.204  Sum_probs=60.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      .++||||||.+|++++++|.++|++|++..|+.+......     ..+.+...|+.++..+...++       ++|.+++
T Consensus         2 ~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-----~~v~~~~~d~~~~~~l~~a~~-------G~~~~~~   69 (275)
T COG0702           2 KILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-----GGVEVVLGDLRDPKSLVAGAK-------GVDGVLL   69 (275)
T ss_pred             eEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-----CCcEEEEeccCCHhHHHHHhc-------cccEEEE
Confidence            5899999999999999999999999999999988776655     478899999999999888776       6787776


Q ss_pred             c
Q 025252          108 S  108 (255)
Q Consensus       108 ~  108 (255)
                      .
T Consensus        70 i   70 (275)
T COG0702          70 I   70 (275)
T ss_pred             E
Confidence            4

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.24  E-value=6.9e-06  Score=71.62  Aligned_cols=74  Identities=23%  Similarity=0.478  Sum_probs=64.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +.++|.|+ |++|+.+|+.|+++| .+|.+++|+.+...++.+... .++.+.++|+.|.+.+.++++       +.|++
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~-~~v~~~~vD~~d~~al~~li~-------~~d~V   72 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIG-GKVEALQVDAADVDALVALIK-------DFDLV   72 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhcc-ccceeEEecccChHHHHHHHh-------cCCEE
Confidence            46899999 999999999999999 899999999888888776644 389999999999999988887       34999


Q ss_pred             EEcC
Q 025252          106 VNSG  109 (255)
Q Consensus       106 i~~a  109 (255)
                      ||++
T Consensus        73 In~~   76 (389)
T COG1748          73 INAA   76 (389)
T ss_pred             EEeC
Confidence            9965

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.22  E-value=6.9e-06  Score=72.59  Aligned_cols=75  Identities=24%  Similarity=0.434  Sum_probs=59.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+|.|+ |.+|+.+++.|++.+.  +|++.+|+.++++++.+++...++.++++|+.|.++++++++       +.|++|
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvVi   72 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVVI   72 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEEE
Confidence            689999 9999999999999874  899999999999998887666789999999999999888876       569999


Q ss_pred             EcCCC
Q 025252          107 NSGCN  111 (255)
Q Consensus       107 ~~a~~  111 (255)
                      |+++.
T Consensus        73 n~~gp   77 (386)
T PF03435_consen   73 NCAGP   77 (386)
T ss_dssp             E-SSG
T ss_pred             ECCcc
Confidence            98653

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PLN00106 malate dehydrogenase

Probab=98.21  E-value=1.5e-05  Score=68.47  Aligned_cols=157  Identities=13%  Similarity=0.139  Sum_probs=91.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ..+++.|||++|.+|..++..|+..+  .++++++.++. ..+.. ++.+........|+++.+++.+.+       .+.
T Consensus        17 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~-~g~a~-Dl~~~~~~~~i~~~~~~~d~~~~l-------~~a   87 (323)
T PLN00106         17 PGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANT-PGVAA-DVSHINTPAQVRGFLGDDQLGDAL-------KGA   87 (323)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCC-CeeEc-hhhhCCcCceEEEEeCCCCHHHHc-------CCC
Confidence            34579999999999999999999765  48999999872 11111 111111111223443333333333       378


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC----ccc-ccccCcCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT----TAC-TEIEGLCN  177 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~----~~~-~~~~~~~~  177 (255)
                      |++|+.||....+      .   ..+++.+..|+.....+.+.+.++   ...+.++++|-..-    ... ......+.
T Consensus        88 DiVVitAG~~~~~------g---~~R~dll~~N~~i~~~i~~~i~~~---~p~aivivvSNPvD~~~~i~t~~~~~~s~~  155 (323)
T PLN00106         88 DLVIIPAGVPRKP------G---MTRDDLFNINAGIVKTLCEAVAKH---CPNALVNIISNPVNSTVPIAAEVLKKAGVY  155 (323)
T ss_pred             CEEEEeCCCCCCC------C---CCHHHHHHHHHHHHHHHHHHHHHH---CCCeEEEEeCCCccccHHHHHHHHHHcCCC
Confidence            9999987754311      1   234566777887766666655543   23455555552211    000 11122334


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELG  202 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~  202 (255)
                      .|...|+.++.-...+-..+|+++.
T Consensus       156 p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        156 DPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             CcceEEEEecchHHHHHHHHHHHhC
Confidence            4567899998666678888888864

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.20  E-value=0.00013  Score=66.20  Aligned_cols=171  Identities=12%  Similarity=0.111  Sum_probs=98.9

Q ss_pred             cceeeecCeEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhC------CCceEEEEeeCCCHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGA-SGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLG------HQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas-~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~   90 (255)
                      ++.....+++++|||++ +.||.+++.+|++.|+.|+++..+ .+...+..+.+.      .....++.++..++.+++.
T Consensus       389 p~~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdA  468 (866)
T COG4982         389 PNGGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDA  468 (866)
T ss_pred             CCCCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHH
Confidence            45556789999999999 589999999999999999886444 344444443331      1346677899999999999


Q ss_pred             HHHHHHHHcC--------------CccEEEEcCCCccccCccCCCCC-ChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-
Q 025252           91 LVDTTVAKFG--------------KLDILVNSGCNLEYRGFVSILDT-PKSDLERLLAVNTIGGFLVAKHAARVMVPRR-  154 (255)
Q Consensus        91 ~~~~~~~~~g--------------~id~li~~a~~~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-  154 (255)
                      +++.|.....              .+|+++-.|.....+   .+.+. +..+  ..+.+-+.+...++-.+.++-..++ 
T Consensus       469 lIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G---~l~~agsraE--~~~rilLw~V~Rliggl~~~~s~r~v  543 (866)
T COG4982         469 LIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG---ELADAGSRAE--FAMRILLWNVLRLIGGLKKQGSSRGV  543 (866)
T ss_pred             HHHHhccccccccCCcceecccccCcceeeecccCCccC---ccccCCchHH--HHHHHHHHHHHHHHHHhhhhccccCc
Confidence            9998864321              256676654333222   22222 2222  2233333333333333333221121 


Q ss_pred             CCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHH
Q 025252          155 RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE  200 (255)
Q Consensus       155 ~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  200 (255)
                      ..|.-.+-    ...+..+..+.  ...|+-||.+++.++.-+..|
T Consensus       544 ~~R~hVVL----PgSPNrG~FGg--DGaYgEsK~aldav~~RW~sE  583 (866)
T COG4982         544 DTRLHVVL----PGSPNRGMFGG--DGAYGESKLALDAVVNRWHSE  583 (866)
T ss_pred             ccceEEEe----cCCCCCCccCC--CcchhhHHHHHHHHHHHhhcc
Confidence            22322222    11111111111  245999999999988766555

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.19  E-value=1.3e-05  Score=71.32  Aligned_cols=127  Identities=16%  Similarity=0.214  Sum_probs=84.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC---CEEEEEecCc---chHHHHHHH--------h----CC--CceEEEEeeCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG---AKVVIADVQD---NLGQALADK--------L----GH--QDVCYIHCDVS   83 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g---~~v~~~~r~~---~~~~~~~~~--------~----~~--~~~~~~~~D~~   83 (255)
                      +++|+++||||||++|+-++..|++.-   .++.+.-|..   +..+.+.++        +    +.  .++.++.+|++
T Consensus        10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~   89 (467)
T KOG1221|consen   10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDIS   89 (467)
T ss_pred             hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecccccc
Confidence            689999999999999999999999854   2566665542   222222222        1    11  47889999998


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEecc
Q 025252           84 NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~  163 (255)
                      +++---+--+. ......+|+++|.|+....          .+.++....+|..|+..+.+.+.+..+   -...+.+|+
T Consensus        90 ~~~LGis~~D~-~~l~~eV~ivih~AAtvrF----------de~l~~al~iNt~Gt~~~l~lak~~~~---l~~~vhVST  155 (467)
T KOG1221|consen   90 EPDLGISESDL-RTLADEVNIVIHSAATVRF----------DEPLDVALGINTRGTRNVLQLAKEMVK---LKALVHVST  155 (467)
T ss_pred             CcccCCChHHH-HHHHhcCCEEEEeeeeecc----------chhhhhhhhhhhHhHHHHHHHHHHhhh---hheEEEeeh
Confidence            75321110000 0111379999999776542          256677888999999999998876542   245777774


Q ss_pred             C
Q 025252          164 T  164 (255)
Q Consensus       164 ~  164 (255)
                      .
T Consensus       156 A  156 (467)
T KOG1221|consen  156 A  156 (467)
T ss_pred             h
Confidence            4

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.13  E-value=3.4e-05  Score=63.80  Aligned_cols=120  Identities=17%  Similarity=0.181  Sum_probs=84.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ..|-++-|.||||.+|+-++.+|++.|..|++=-|..+-...-..-.++ +++.++..|+.|+++|+++++.       -
T Consensus        59 ~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~-------s  131 (391)
T KOG2865|consen   59 VSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH-------S  131 (391)
T ss_pred             ccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh-------C
Confidence            5677899999999999999999999999999987765532222222222 6899999999999999999884       4


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTG  165 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~  165 (255)
                      +++||.-|..-.  .+   ..      +.-++|+.++-.+++.+-+.    +--++|.+|.-+
T Consensus       132 NVVINLIGrd~e--Tk---nf------~f~Dvn~~~aerlAricke~----GVerfIhvS~Lg  179 (391)
T KOG2865|consen  132 NVVINLIGRDYE--TK---NF------SFEDVNVHIAERLARICKEA----GVERFIHVSCLG  179 (391)
T ss_pred             cEEEEeeccccc--cC---Cc------ccccccchHHHHHHHHHHhh----Chhheeehhhcc
Confidence            899995332110  01   11      23356788877777777432    334577777443

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.12  E-value=9.9e-06  Score=60.77  Aligned_cols=74  Identities=23%  Similarity=0.421  Sum_probs=57.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++++++|.|+ ||.|++++..|.+.|.+ |.++.|+.++.+++.++++...+.++..+  +..   +...       .
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~--~~~---~~~~-------~   75 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE--DLE---EALQ-------E   75 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG--GHC---HHHH-------T
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH--HHH---HHHh-------h
Confidence            578999999998 89999999999999976 99999999999999988854445555432  222   2222       6


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      .|++||+.
T Consensus        76 ~DivI~aT   83 (135)
T PF01488_consen   76 ADIVINAT   83 (135)
T ss_dssp             ESEEEE-S
T ss_pred             CCeEEEec
Confidence            89999963

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.12  E-value=4.2e-06  Score=67.16  Aligned_cols=161  Identities=20%  Similarity=0.272  Sum_probs=100.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHc-CCE-EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKN-GAK-VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~-g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+..+++|||+-|-+|..+|+.|... |.+ |++.+-..... ...     ..--++..|+-|..++++++-.     .+
T Consensus        42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V~-----~~GPyIy~DILD~K~L~eIVVn-----~R  110 (366)
T KOG2774|consen   42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NVT-----DVGPYIYLDILDQKSLEEIVVN-----KR  110 (366)
T ss_pred             CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hhc-----ccCCchhhhhhccccHHHhhcc-----cc
Confidence            34557999999999999999988663 654 44444332221 111     1223566888888888777653     38


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC----
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN----  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~----  177 (255)
                      ||-+||-......        ......--...+|+.|.-++++.+.++     +-++..-|.+++.+..+..++..    
T Consensus       111 IdWL~HfSALLSA--------vGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iFVPSTIGAFGPtSPRNPTPdltI  177 (366)
T KOG2774|consen  111 IDWLVHFSALLSA--------VGETNVPLALQVNIRGVHNILQVAAKH-----KLKVFVPSTIGAFGPTSPRNPTPDLTI  177 (366)
T ss_pred             cceeeeHHHHHHH--------hcccCCceeeeecchhhhHHHHHHHHc-----CeeEeecccccccCCCCCCCCCCCeee
Confidence            9999995211110        011111233568999988888877543     34566666666555444333322    


Q ss_pred             -CCCcccccchHHHHHHHHHHHHHhcccCcEEeEe
Q 025252          178 -IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV  211 (255)
Q Consensus       178 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v  211 (255)
                       .|...|+.||.-.+-+-+.+...   +|+...|+
T Consensus       178 QRPRTIYGVSKVHAEL~GEy~~hr---Fg~dfr~~  209 (366)
T KOG2774|consen  178 QRPRTIYGVSKVHAELLGEYFNHR---FGVDFRSM  209 (366)
T ss_pred             ecCceeechhHHHHHHHHHHHHhh---cCccceec
Confidence             46788999999888777776665   45555555

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.11  E-value=1.1e-05  Score=72.81  Aligned_cols=76  Identities=22%  Similarity=0.385  Sum_probs=57.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++|+|+++ +|.++|+.|+++|++|++.+++. +..++..+++...++.++..|..+.            ..++
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------------FLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------------Hhhc
Confidence            57899999999877 99999999999999999999975 3344434444433566777787651            1247


Q ss_pred             ccEEEEcCCC
Q 025252          102 LDILVNSGCN  111 (255)
Q Consensus       102 id~li~~a~~  111 (255)
                      +|++|++++.
T Consensus        69 ~d~vv~~~g~   78 (450)
T PRK14106         69 VDLVVVSPGV   78 (450)
T ss_pred             CCEEEECCCC
Confidence            8999998654

>PRK09620 hypothetical protein; Provisional

Probab=98.09  E-value=7e-06  Score=67.10  Aligned_cols=84  Identities=14%  Similarity=0.242  Sum_probs=52.9

Q ss_pred             ecCeEEEEecCC----------------ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHH
Q 025252           24 LQGRVAIITGGA----------------SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNER   86 (255)
Q Consensus        24 ~~~k~~lVtGas----------------~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~   86 (255)
                      |.||+++||+|.                |.+|.++|++|.++|++|+++++.......   ... ......+..|    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~~~~~~~~~V~s~----~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DINNQLELHPFEGI----I   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---ccCCceeEEEEecH----H
Confidence            478999999886                999999999999999999988764321111   001 1123334432    2


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCcccc
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEYR  115 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~~  115 (255)
                      ++.+.++++.+. .++|++||+|+...+.
T Consensus        74 d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         74 DLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            222333333321 2689999998766543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.08  E-value=1.4e-05  Score=64.76  Aligned_cols=175  Identities=17%  Similarity=0.133  Sum_probs=110.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH-HHh-C------CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA-DKL-G------HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~-~~~-~------~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ..|+++|||-+|-=|.-++.-|+++|++|+.+-|+........ +.+ .      ........+|+||...+.+++..+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            3458999999999999999999999999998877655433322 222 1      135667789999999999998877 


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC-cc-c---cc
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT-TA-C---TE  171 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~-~~-~---~~  171 (255)
                          +++=+.|.|....       ...+.+-.+-..++...|++.++.++...-..+  +.=.+-.|.+. .+ .   +.
T Consensus       106 ----kPtEiYnLaAQSH-------VkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQ  172 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSH-------VKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQ  172 (376)
T ss_pred             ----Cchhhhhhhhhcc-------eEEEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCCCc
Confidence                5666666543222       334555556677788899998888775432222  12222222211 11 1   11


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHH---hcccCcEEeEecc
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAE---LGRYGIRVDCVSH  213 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e---~~~~gi~v~~v~p  213 (255)
                      ....+..|.++|+++|-...=++-.+...   ++=+||-.|-=+|
T Consensus       173 sE~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESP  217 (376)
T KOG1372|consen  173 SETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESP  217 (376)
T ss_pred             ccCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCC
Confidence            22344567899999997654333333332   2345677777777

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.08  E-value=3.8e-05  Score=67.28  Aligned_cols=169  Identities=11%  Similarity=0.073  Sum_probs=98.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH-HhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD-KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ..+..+++|+||+|+.|+-+++.|.++|..|.++.|+.+...++.. .........+..|.....++..-+.+...  -.
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~--~~  153 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP--KG  153 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc--cc
Confidence            3567789999999999999999999999999999999887776655 22234555666666665544333222211  12


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ..+++-+++..+  ...        +..--..+.+.++.++++++...    +-.+++++|+.+.......         
T Consensus       154 ~~~v~~~~ggrp--~~e--------d~~~p~~VD~~g~knlvdA~~~a----Gvk~~vlv~si~~~~~~~~---------  210 (411)
T KOG1203|consen  154 VVIVIKGAGGRP--EEE--------DIVTPEKVDYEGTKNLVDACKKA----GVKRVVLVGSIGGTKFNQP---------  210 (411)
T ss_pred             ceeEEecccCCC--Ccc--------cCCCcceecHHHHHHHHHHHHHh----CCceEEEEEeecCcccCCC---------
Confidence            344554433222  111        11112234566778888888433    4456888885544332221         


Q ss_pred             ccccch-HHHHHHH-HHHHHHhcccCcEEeEeccCcch
Q 025252          182 YYGVSK-FGILGLV-KSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       182 ~Y~asK-aa~~~~~-~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                       |.... .....-. +....++...|+.-..|.||+..
T Consensus       211 -~~~~~~~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~  247 (411)
T KOG1203|consen  211 -PNILLLNGLVLKAKLKAEKFLQDSGLPYTIIRPGGLE  247 (411)
T ss_pred             -chhhhhhhhhhHHHHhHHHHHHhcCCCcEEEeccccc
Confidence             22222 1111111 23444556678888889984443

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.05  E-value=4.9e-05  Score=65.22  Aligned_cols=154  Identities=17%  Similarity=0.127  Sum_probs=87.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+++.|+|++|.+|..++..++..+  .++++++++... .+.. ++.+........+.+|+.+..+.+       .+
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~-g~a~-Dl~~~~~~~~v~~~td~~~~~~~l-------~g   76 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAP-GVAA-DLSHIDTPAKVTGYADGELWEKAL-------RG   76 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCc-cccc-chhhcCcCceEEEecCCCchHHHh-------CC
Confidence            355589999999999999999998655  689999983221 1111 111111122344666544432322       37


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc------cCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI------EGL  175 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~------~~~  175 (255)
                      .|++|+++|....         +.+.+.+.++.|+...-.+.+.+.    +.+..++++++|-..-.....      ...
T Consensus        77 aDvVVitaG~~~~---------~~~tR~dll~~N~~i~~~i~~~i~----~~~~~~iviv~SNPvdv~~~~~~~~~~~~s  143 (321)
T PTZ00325         77 ADLVLICAGVPRK---------PGMTRDDLFNTNAPIVRDLVAAVA----SSAPKAIVGIVSNPVNSTVPIAAETLKKAG  143 (321)
T ss_pred             CCEEEECCCCCCC---------CCCCHHHHHHHHHHHHHHHHHHHH----HHCCCeEEEEecCcHHHHHHHHHhhhhhcc
Confidence            8999998775431         112345667788877655555554    445455666553321111111      223


Q ss_pred             CCCCCcccccchHHHHH--HHHHHHHHh
Q 025252          176 CNIPANYYGVSKFGILG--LVKSLAAEL  201 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~--~~~~la~e~  201 (255)
                      +..|...|+.+ . ++.  |-..+++.+
T Consensus       144 g~p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        144 VYDPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             CCChhheeech-h-HHHHHHHHHHHHHh
Confidence            34455678887 3 663  555666664

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.88  E-value=5.2e-05  Score=65.31  Aligned_cols=72  Identities=19%  Similarity=0.304  Sum_probs=53.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHc-C-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKN-G-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~-g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+|+++||||+|.||..++++|+++ | .+++++.|+++.+.++.+++..       .|+.   ++++.       ..
T Consensus       152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~-------~~i~---~l~~~-------l~  214 (340)
T PRK14982        152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG-------GKIL---SLEEA-------LP  214 (340)
T ss_pred             CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc-------ccHH---hHHHH-------Hc
Confidence            578999999999999999999999864 5 5899999988877777665432       2222   22222       23


Q ss_pred             CccEEEEcCCC
Q 025252          101 KLDILVNSGCN  111 (255)
Q Consensus       101 ~id~li~~a~~  111 (255)
                      ..|++|+.++.
T Consensus       215 ~aDiVv~~ts~  225 (340)
T PRK14982        215 EADIVVWVASM  225 (340)
T ss_pred             cCCEEEECCcC
Confidence            68999997654

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.82  E-value=0.0001  Score=62.67  Aligned_cols=77  Identities=17%  Similarity=0.242  Sum_probs=64.2

Q ss_pred             EEEecCCChHHHHHHHHHHH----cCCEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           29 AIITGGASGIGASAAQLFHK----NGAKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~----~g~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++|-||||.-|.-+++.+.+    .+....+.+|+++++++..++...      .....+.||.+|++++.++.++.   
T Consensus         8 vVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~---   84 (423)
T KOG2733|consen    8 VVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQA---   84 (423)
T ss_pred             EEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhh---
Confidence            89999999999999999999    788999999999998887766542      23447889999999999988754   


Q ss_pred             cCCccEEEEcCCCc
Q 025252           99 FGKLDILVNSGCNL  112 (255)
Q Consensus        99 ~g~id~li~~a~~~  112 (255)
                          .+++|++|..
T Consensus        85 ----~vivN~vGPy   94 (423)
T KOG2733|consen   85 ----RVIVNCVGPY   94 (423)
T ss_pred             ----EEEEeccccc
Confidence                6788876543

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=97.74  E-value=0.00034  Score=56.11  Aligned_cols=143  Identities=15%  Similarity=0.066  Sum_probs=81.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC---EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA---KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++|||++|-.|.||.+.+.+.|.   +.+..+                   --.+|+++.++.++++++.     ++-
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~-------------------skd~DLt~~a~t~~lF~~e-----kPt   57 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIG-------------------SKDADLTNLADTRALFESE-----KPT   57 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEec-------------------cccccccchHHHHHHHhcc-----CCc
Confidence            6799999999999999999988764   122211                   1238999999999999876     678


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEE-eccCCCccccccc--------C
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILY-TTGTGTTACTEIE--------G  174 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~-is~~~~~~~~~~~--------~  174 (255)
                      .+||.|...+.  .-.-.....+-+.    .|+.-.-++++.+.+.-.    .++++ .|++--..-.+.+        +
T Consensus        58 hVIhlAAmVGG--lf~N~~ynldF~r----~Nl~indNVlhsa~e~gv----~K~vsclStCIfPdkt~yPIdEtmvh~g  127 (315)
T KOG1431|consen   58 HVIHLAAMVGG--LFHNNTYNLDFIR----KNLQINDNVLHSAHEHGV----KKVVSCLSTCIFPDKTSYPIDETMVHNG  127 (315)
T ss_pred             eeeehHhhhcc--hhhcCCCchHHHh----hcceechhHHHHHHHhch----hhhhhhcceeecCCCCCCCCCHHHhccC
Confidence            88887543331  0111122334444    444444455555554421    12222 2222111111111        1


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGR  203 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~  203 (255)
                      ++-...-.|+.+|.-+.-..+.++.++..
T Consensus       128 pphpsN~gYsyAKr~idv~n~aY~~qhg~  156 (315)
T KOG1431|consen  128 PPHPSNFGYSYAKRMIDVQNQAYRQQHGR  156 (315)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHHhCC
Confidence            11111134999998777777888888544

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.73  E-value=0.00026  Score=68.50  Aligned_cols=162  Identities=13%  Similarity=0.206  Sum_probs=108.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcch---HHHHHHHhCCC--ceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNL---GQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~---~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ..|..+|+||-||.|.+++..|..+|++ +++++|+.-+   ...........  ++.+-.-|++..+..+.++++.. +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            4678999999999999999999999986 7777887433   12222222222  23333457777777777777653 4


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      .+.+..++|.|.....   ..+++++.+.|+++-+-.+.++.++-+.-.+.-- .-.-.|+|.| ++    ...++.+  
T Consensus      1846 l~~vGGiFnLA~VLRD---~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~-~LdyFv~FSS-vs----cGRGN~G-- 1914 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRD---GLIENQTPKNFKDVAKPKYSGTINLDRVSREICP-ELDYFVVFSS-VS----CGRGNAG-- 1914 (2376)
T ss_pred             cccccchhhHHHHHHh---hhhcccChhHHHhhhccceeeeeehhhhhhhhCc-ccceEEEEEe-ec----ccCCCCc--
Confidence            5788888887654432   4678899999999999999999987665443321 1123455544 21    1122222  


Q ss_pred             CCcccccchHHHHHHHHHHHH
Q 025252          179 PANYYGVSKFGILGLVKSLAA  199 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~  199 (255)
                       ++.|+-+..+++.+...=..
T Consensus      1915 -QtNYG~aNS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1915 -QTNYGLANSAMERICEQRRH 1934 (2376)
T ss_pred             -ccccchhhHHHHHHHHHhhh
Confidence             26699999999998765443

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.64  E-value=0.00045  Score=62.27  Aligned_cols=79  Identities=25%  Similarity=0.297  Sum_probs=51.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++.+|+++|||+++ +|.++++.|++.|++|++.+++........+++....+.+...+  ++.++   .+      .+
T Consensus         1 ~~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          1 TEYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CCcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEEeCC--CCHHH---hc------Cc
Confidence            356789999999976 99999999999999999998765433333333322234333222  12221   11      14


Q ss_pred             ccEEEEcCCCc
Q 025252          102 LDILVNSGCNL  112 (255)
Q Consensus       102 id~li~~a~~~  112 (255)
                      +|++|+++|..
T Consensus        69 ~d~vV~s~gi~   79 (447)
T PRK02472         69 FDLMVKNPGIP   79 (447)
T ss_pred             CCEEEECCCCC
Confidence            89999976544

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.60  E-value=0.00032  Score=60.50  Aligned_cols=114  Identities=16%  Similarity=0.143  Sum_probs=63.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-------CEEEEEecCcch--HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNG-------AKVVIADVQDNL--GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g-------~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|||++|.+|.+++..|+..+       .++++.++++..  ++....++.+ -..+...|++...+..+       .
T Consensus         4 kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d-~~~~~~~~~~~~~~~~~-------~   75 (325)
T cd01336           4 RVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQD-CAFPLLKSVVATTDPEE-------A   75 (325)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhh-ccccccCCceecCCHHH-------H
Confidence            48999999999999999998844       589999996532  1111000000 00011123322222222       2


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC--CCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR--RRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is  162 (255)
                      +.+.|++|+.||....      ...+.   .+.++.|+.-    ++.+.+.+++.  +.+.++++|
T Consensus        76 l~~aDiVI~tAG~~~~------~~~~R---~~l~~~N~~i----~~~i~~~i~~~~~~~~iiivvs  128 (325)
T cd01336          76 FKDVDVAILVGAMPRK------EGMER---KDLLKANVKI----FKEQGEALDKYAKKNVKVLVVG  128 (325)
T ss_pred             hCCCCEEEEeCCcCCC------CCCCH---HHHHHHHHHH----HHHHHHHHHHhCCCCeEEEEec
Confidence            2378999998875431      12233   3455556554    34444444444  367777777

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.53  E-value=0.00037  Score=53.78  Aligned_cols=161  Identities=14%  Similarity=0.070  Sum_probs=95.6

Q ss_pred             cCccceeeecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHH
Q 025252           16 PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        16 ~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      |.+..-++|+++.++|.||||--|..+.+++++.+  ..|+++.|++....+.     ..++.....|.+..++...   
T Consensus         8 sklrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-----~k~v~q~~vDf~Kl~~~a~---   79 (238)
T KOG4039|consen    8 SKLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-----DKVVAQVEVDFSKLSQLAT---   79 (238)
T ss_pred             hHHHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-----cceeeeEEechHHHHHHHh---
Confidence            33444477899999999999999999999999988  4788888875322211     1355566677655554332   


Q ss_pred             HHHHHcCCccEEEEcCCCc-cccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           94 TTVAKFGKLDILVNSGCNL-EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      .    ..++|+++++-|.. +..+...+...+-+..           +.+.+.+    ++++-..++.+||.++    ..
T Consensus        80 ~----~qg~dV~FcaLgTTRgkaGadgfykvDhDyv-----------l~~A~~A----Ke~Gck~fvLvSS~GA----d~  136 (238)
T KOG4039|consen   80 N----EQGPDVLFCALGTTRGKAGADGFYKVDHDYV-----------LQLAQAA----KEKGCKTFVLVSSAGA----DP  136 (238)
T ss_pred             h----hcCCceEEEeecccccccccCceEeechHHH-----------HHHHHHH----HhCCCeEEEEEeccCC----Cc
Confidence            2    23799999873222 2111122222222211           1123333    3344456888885543    22


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      ...     -.|-..|.-++.-+-.|-.+      ++..+.| |.+..
T Consensus       137 sSr-----FlY~k~KGEvE~~v~eL~F~------~~~i~RP-G~ll~  171 (238)
T KOG4039|consen  137 SSR-----FLYMKMKGEVERDVIELDFK------HIIILRP-GPLLG  171 (238)
T ss_pred             ccc-----eeeeeccchhhhhhhhcccc------EEEEecC-cceec
Confidence            222     23888898888766555544      6778889 55433

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.52  E-value=0.00047  Score=52.61  Aligned_cols=72  Identities=26%  Similarity=0.452  Sum_probs=52.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++++++|+|+ |++|+++++.|.+.| .+|.+++|+.+..+++.+++....   +..+.++.++.          ..+.
T Consensus        17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~---~~~~~~~~~~~----------~~~~   82 (155)
T cd01065          17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG---IAIAYLDLEEL----------LAEA   82 (155)
T ss_pred             CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc---cceeecchhhc----------cccC
Confidence            56788999998 899999999999986 789999999888777776654211   22344433322          2378


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |++|++.
T Consensus        83 Dvvi~~~   89 (155)
T cd01065          83 DLIINTT   89 (155)
T ss_pred             CEEEeCc
Confidence            9999974

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.50  E-value=0.00032  Score=59.19  Aligned_cols=48  Identities=23%  Similarity=0.373  Sum_probs=42.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.+|+++|+|+ ||+|+++++.|+..| .+|.+++|+.++.+++.+++.
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~  168 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFG  168 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence            578899999997 899999999999999 799999999988888877764

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.50  E-value=0.0021  Score=54.49  Aligned_cols=146  Identities=18%  Similarity=0.213  Sum_probs=84.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|.++++.+...|.+|++++++++..+.+. +++.   . ..+|..+++..+.+.+.. . ..++|+
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~---~-~~~~~~~~~~~~~~~~~~-~-~~~~d~  216 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGA---D-AVFNYRAEDLADRILAAT-A-GQGVDV  216 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC---C-EEEeCCCcCHHHHHHHHc-C-CCceEE
Confidence            5789999999999999999999999999999998877655553 3321   1 124444444333332221 1 136999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-----cccCcCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-----EIEGLCNIP  179 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-----~~~~~~~~~  179 (255)
                      ++++++..              ..               +.....+  +..|+++.+++.......     .........
T Consensus       217 vi~~~~~~--------------~~---------------~~~~~~l--~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~  265 (325)
T cd08253         217 IIEVLANV--------------NL---------------AKDLDVL--APGGRIVVYGSGGLRGTIPINPLMAKEASIRG  265 (325)
T ss_pred             EEECCchH--------------HH---------------HHHHHhh--CCCCEEEEEeecCCcCCCChhHHHhcCceEEe
Confidence            99864311              01               1111222  245788877642200000     000000001


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEE
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRV  208 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v  208 (255)
                      ...|..+|.....+.+.+...+....++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  294 (325)
T cd08253         266 VLLYTATPEERAAAAEAIAAGLADGALRP  294 (325)
T ss_pred             eehhhcCHHHHHHHHHHHHHHHHCCCccC
Confidence            12477778888888888877776655554

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.39  E-value=0.00059  Score=56.71  Aligned_cols=72  Identities=14%  Similarity=0.278  Sum_probs=55.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++|+|||+- |+.++++|.+.|++|++..+++...+.+..    .....+..+..+.+++.+++++.     ++|++|
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~----~g~~~v~~g~l~~~~l~~~l~~~-----~i~~VI   70 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI----HQALTVHTGALDPQELREFLKRH-----SIDILV   70 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc----cCCceEEECCCCHHHHHHHHHhc-----CCCEEE
Confidence            36999999997 999999999999999999888765443332    12345667777888877776653     799999


Q ss_pred             Ec
Q 025252          107 NS  108 (255)
Q Consensus       107 ~~  108 (255)
                      +.
T Consensus        71 DA   72 (256)
T TIGR00715        71 DA   72 (256)
T ss_pred             Ec
Confidence            85

This enzyme was found to be a monomer by gel filtration.

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.37  E-value=0.0015  Score=51.62  Aligned_cols=79  Identities=23%  Similarity=0.372  Sum_probs=47.8

Q ss_pred             ecCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH
Q 025252           24 LQGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE   87 (255)
Q Consensus        24 ~~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (255)
                      |+||+++||+|                ||..|.++|+.+..+|++|.++........       +..+..  .++.+.++
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~~-------p~~~~~--i~v~sa~e   71 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLPP-------PPGVKV--IRVESAEE   71 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-----------TTEEE--EE-SSHHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCccccc-------cccceE--EEecchhh
Confidence            46788888875                678999999999999999999887643110       123433  44556666


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccc
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEY  114 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~  114 (255)
                      +.+.+.+..   ..-|++|++|....+
T Consensus        72 m~~~~~~~~---~~~Di~I~aAAVsDf   95 (185)
T PF04127_consen   72 MLEAVKELL---PSADIIIMAAAVSDF   95 (185)
T ss_dssp             HHHHHHHHG---GGGSEEEE-SB--SE
T ss_pred             hhhhhcccc---CcceeEEEecchhhe
Confidence            655555443   345999999766654

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.37  E-value=0.00064  Score=62.49  Aligned_cols=49  Identities=33%  Similarity=0.501  Sum_probs=42.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++.+++.+++.
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~  423 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAVG  423 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC
Confidence            3578999999999 699999999999999999999999888877777653

>cd00704 MDH Malate dehydrogenase

Probab=97.31  E-value=0.0034  Score=54.14  Aligned_cols=112  Identities=15%  Similarity=0.169  Sum_probs=64.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH--HHH--HHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER--EVI--NLVDTTV   96 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~--~~~--~~~~~~~   96 (255)
                      ++.|||++|.+|..++..|+..|.       ++++.++++..          +.......|+.|..  ...  .+.....
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~----------~~~~g~~~Dl~d~~~~~~~~~~i~~~~~   71 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM----------KALEGVVMELQDCAFPLLKGVVITTDPE   71 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc----------CccceeeeehhhhcccccCCcEEecChH
Confidence            489999999999999999998652       59999998621          01222334444431  000  0001112


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC--CCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR--RRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is  162 (255)
                      +.....|++|+.||....+      ..+..+   .++.|+.    +++.+.+.+++.  +.+.++++|
T Consensus        72 ~~~~~aDiVVitAG~~~~~------g~tR~d---ll~~N~~----i~~~i~~~i~~~~~~~~iiivvs  126 (323)
T cd00704          72 EAFKDVDVAILVGAFPRKP------GMERAD---LLRKNAK----IFKEQGEALNKVAKPTVKVLVVG  126 (323)
T ss_pred             HHhCCCCEEEEeCCCCCCc------CCcHHH---HHHHhHH----HHHHHHHHHHHhCCCCeEEEEeC
Confidence            2334789999988754311      234433   3344443    456666666554  467777777

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.27  E-value=0.0012  Score=55.39  Aligned_cols=47  Identities=21%  Similarity=0.321  Sum_probs=41.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ..+|+++|+|+ ||+|++++..|++.|.+|.+++|+.++.+++.+++.
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~  161 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQ  161 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh
Confidence            46789999999 699999999999999999999999888777777654

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK05086 malate dehydrogenase; Provisional

Probab=97.26  E-value=0.0025  Score=54.64  Aligned_cols=35  Identities=26%  Similarity=0.446  Sum_probs=28.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHH---cCCEEEEEecCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDN   61 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~---~g~~v~~~~r~~~   61 (255)
                      ++++|+|++|++|.+++..+..   .+.++++.++++.
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~   38 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV   38 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC
Confidence            4689999999999999998854   3467888888754

>PRK06849 hypothetical protein; Provisional

Probab=97.22  E-value=0.0037  Score=55.33  Aligned_cols=81  Identities=20%  Similarity=0.293  Sum_probs=53.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +.|+|+|||++..+|..+++.|.+.|++|++++.+.........-.  .....+...-.+.+...+.+.++.++. ++|+
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~--d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id~   79 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV--DGFYTIPSPRWDPDAYIQALLSIVQRE-NIDL   79 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh--hheEEeCCCCCCHHHHHHHHHHHHHHc-CCCE
Confidence            4678999999999999999999999999999998865433211111  122222222334444444444554443 6899


Q ss_pred             EEEc
Q 025252          105 LVNS  108 (255)
Q Consensus       105 li~~  108 (255)
                      +|-.
T Consensus        80 vIP~   83 (389)
T PRK06849         80 LIPT   83 (389)
T ss_pred             EEEC
Confidence            9864

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.19  E-value=0.0086  Score=64.16  Aligned_cols=184  Identities=12%  Similarity=0.089  Sum_probs=106.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+.++.++|++.+++++.+++.+|.++|+.|+++...+..... ...+. ..+--+...--+.+++..+++.+.+..+.+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1829 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVVSHS-ASPLA-SAIASVTLGTIDDTSIEAVIKDIEEKTAQI 1829 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecccccccc-ccccc-cccccccccccchHHHHHHHHhhhcccccc
Confidence            3567888888888999999999999999999887533221000 00001 122223444445677888888887777889


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC--C
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--A  180 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~--~  180 (255)
                      +.+||........ .......   .+...-...+...|.+.|.+.+.+...+.+.++.+|..++.. +........+  .
T Consensus      1830 ~g~i~l~~~~~~~-~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~-g~~~~~~~~~~~~ 1904 (2582)
T TIGR02813      1830 DGFIHLQPQHKSV-ADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGF-GYSNGDADSGTQQ 1904 (2582)
T ss_pred             ceEEEeccccccc-ccccccc---ccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCcc-ccCCccccccccc
Confidence            9999853222100 0000000   111111123445677777777766555567777777443111 0000000000  0


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .-=....+++.+|+|++++||....+|...+.|
T Consensus      1905 ~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~ 1937 (2582)
T TIGR02813      1905 VKAELNQAALAGLTKTLNHEWNAVFCRALDLAP 1937 (2582)
T ss_pred             cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCC
Confidence            001235789999999999999887788888877

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.15  E-value=0.0048  Score=53.20  Aligned_cols=112  Identities=14%  Similarity=0.158  Sum_probs=66.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHH--HHH--HHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVI--NLV--DTTV   96 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~--~~~--~~~~   96 (255)
                      ++.|+|++|.+|..++..|+..+.       ++++.++++...          .......|+.|.....  ...  ....
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~----------~a~g~~~Dl~d~~~~~~~~~~~~~~~~   70 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK----------VLEGVVMELMDCAFPLLDGVVPTHDPA   70 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc----------ccceeEeehhcccchhcCceeccCChH
Confidence            378999999999999999988553       599999865531          1223344555443110  000  0112


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC--CCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR--RRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is  162 (255)
                      +.....|++|+.||....      ..   +...+.++.|+.-    ++.+.+.+.+.  +.+.++++|
T Consensus        71 ~~~~~aDiVVitAG~~~~------~~---~tr~~ll~~N~~i----~k~i~~~i~~~~~~~~iiivvs  125 (324)
T TIGR01758        71 VAFTDVDVAILVGAFPRK------EG---MERRDLLSKNVKI----FKEQGRALDKLAKKDCKVLVVG  125 (324)
T ss_pred             HHhCCCCEEEEcCCCCCC------CC---CcHHHHHHHHHHH----HHHHHHHHHhhCCCCeEEEEeC
Confidence            333578999998765421      11   2245556666554    45555555544  457777777

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.13  E-value=0.011  Score=53.83  Aligned_cols=111  Identities=15%  Similarity=0.186  Sum_probs=69.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH------------HHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE------------REVINL   91 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~------------~~~~~~   91 (255)
                      ..+.+++|+|+ |.+|+..+......|++|++++++++.++...+ ++   ..++..|..+.            ++..+.
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aes-lG---A~~v~i~~~e~~~~~~gya~~~s~~~~~~  237 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVES-MG---AEFLELDFEEEGGSGDGYAKVMSEEFIKA  237 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEEeccccccccccchhhhcchhHHHH
Confidence            35778999998 789999999999999999999999887665544 43   23333333221            111111


Q ss_pred             HHHH-HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEecc
Q 025252           92 VDTT-VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG  163 (255)
Q Consensus        92 ~~~~-~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~  163 (255)
                      ..+. .+..++.|++|.+++..+.+                      ++..+.+..+..|+  ++++|+.++.
T Consensus       238 ~~~~~~~~~~gaDVVIetag~pg~~----------------------aP~lit~~~v~~mk--pGgvIVdvg~  286 (509)
T PRK09424        238 EMALFAEQAKEVDIIITTALIPGKP----------------------APKLITAEMVASMK--PGSVIVDLAA  286 (509)
T ss_pred             HHHHHHhccCCCCEEEECCCCCccc----------------------CcchHHHHHHHhcC--CCCEEEEEcc
Confidence            1222 22225799999987654311                      11122356667763  5678888873

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=97.12  E-value=0.0014  Score=55.15  Aligned_cols=50  Identities=20%  Similarity=0.417  Sum_probs=44.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH   72 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~   72 (255)
                      .+.+++.++|.|+ ||.+++++..|++.| .+++++.|+.++.+++.+.+..
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~  172 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGE  172 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh
Confidence            4457899999998 789999999999999 5899999999999998887764

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.11  E-value=0.00076  Score=54.06  Aligned_cols=48  Identities=23%  Similarity=0.418  Sum_probs=42.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL   70 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~   70 (255)
                      .++++|+++|+|.+ .+|+.+++.|.+.|++|++.+++++...++.+.+
T Consensus        24 ~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~   71 (200)
T cd01075          24 DSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAELF   71 (200)
T ss_pred             CCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            46899999999995 8999999999999999999999887777766654

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=97.06  E-value=0.0026  Score=51.97  Aligned_cols=72  Identities=21%  Similarity=0.267  Sum_probs=56.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++|.|+ |-+|..+|+.|.+.|++|++++++++..++....-  ...+.+.+|.++++-++++=      ....|++|
T Consensus         1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~--~~~~~v~gd~t~~~~L~~ag------i~~aD~vv   71 (225)
T COG0569           1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE--LDTHVVIGDATDEDVLEEAG------IDDADAVV   71 (225)
T ss_pred             CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh--cceEEEEecCCCHHHHHhcC------CCcCCEEE
Confidence            45788888 56999999999999999999999998877744321  35788999999999887761      12567777


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      -
T Consensus        72 a   72 (225)
T COG0569          72 A   72 (225)
T ss_pred             E
Confidence            5

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.03  E-value=0.011  Score=44.63  Aligned_cols=110  Identities=22%  Similarity=0.268  Sum_probs=66.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC----Cce-EEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH----QDV-CYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~----~~~-~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.|+|++|.+|.+++..|...+  .++++.+++++..+....++.+    ... ..+..  .+++++           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~~-----------~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEAL-----------K   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGGG-----------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--cccccc-----------c
Confidence            58999999999999999999986  5899999997765554444322    111 11222  333322           3


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .-|++|..||....      ...+..+   .++.|..-.-.+.+.+.++   .+.+.++.+|
T Consensus        69 ~aDivvitag~~~~------~g~sR~~---ll~~N~~i~~~~~~~i~~~---~p~~~vivvt  118 (141)
T PF00056_consen   69 DADIVVITAGVPRK------PGMSRLD---LLEANAKIVKEIAKKIAKY---APDAIVIVVT  118 (141)
T ss_dssp             TESEEEETTSTSSS------TTSSHHH---HHHHHHHHHHHHHHHHHHH---STTSEEEE-S
T ss_pred             cccEEEEecccccc------ccccHHH---HHHHhHhHHHHHHHHHHHh---CCccEEEEeC
Confidence            67999997765431      1233333   3455555544444444433   3457777777

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.98  E-value=0.0088  Score=51.22  Aligned_cols=107  Identities=19%  Similarity=0.202  Sum_probs=65.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|.|+ |++|.+++..|+..|  .++++++++++..+.....+.+      ......   ..+.+.+           
T Consensus         2 kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~---~~~~~~l-----------   66 (306)
T cd05291           2 KVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK---AGDYSDC-----------   66 (306)
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE---cCCHHHh-----------
Confidence            5888996 899999999999999  5899999998876666655432      111111   1222221           


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      ..-|++|+++|....      ...+..   +.++.|..-    ++...+.+++ .+.+.++++|
T Consensus        67 ~~aDIVIitag~~~~------~g~~R~---dll~~N~~i----~~~~~~~i~~~~~~~~vivvs  117 (306)
T cd05291          67 KDADIVVITAGAPQK------PGETRL---DLLEKNAKI----MKSIVPKIKASGFDGIFLVAS  117 (306)
T ss_pred             CCCCEEEEccCCCCC------CCCCHH---HHHHHHHHH----HHHHHHHHHHhCCCeEEEEec
Confidence            368999998764321      122333   334444444    4444444433 3467777777

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=96.98  E-value=0.0041  Score=55.39  Aligned_cols=72  Identities=14%  Similarity=0.207  Sum_probs=53.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+|+++|.|+ |++|+.+++.|+..|. ++.++.|+.++.+++.++++.  ...+     ..+++.+.+       ..
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~~~-----~~~~l~~~l-------~~  242 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--ASAH-----YLSELPQLI-------KK  242 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--CeEe-----cHHHHHHHh-------cc
Confidence            478899999999 8999999999999995 799999998888888877642  1111     123332222       36


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      .|++|++.
T Consensus       243 aDiVI~aT  250 (414)
T PRK13940        243 ADIIIAAV  250 (414)
T ss_pred             CCEEEECc
Confidence            79999973

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.95  E-value=0.0032  Score=53.23  Aligned_cols=47  Identities=17%  Similarity=0.217  Sum_probs=41.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +++|+++|.|+ ||.+++++..|++.|. +|.++.|+.++.+++.+++.
T Consensus       123 ~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~  170 (282)
T TIGR01809       123 LAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGV  170 (282)
T ss_pred             cCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhh
Confidence            57889999987 8999999999999996 79999999988888887764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.95  E-value=0.0047  Score=44.64  Aligned_cols=68  Identities=24%  Similarity=0.289  Sum_probs=52.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      ++|.|. +.+|+.+++.|.+.+.+|++++++++..+++.++    .+.++.+|.++++.++++  .    ..+.+.+|.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~----~~~~i~gd~~~~~~l~~a--~----i~~a~~vv~   68 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREE----GVEVIYGDATDPEVLERA--G----IEKADAVVI   68 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHT----TSEEEES-TTSHHHHHHT--T----GGCESEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhc----ccccccccchhhhHHhhc--C----ccccCEEEE
Confidence            577888 5799999999999777999999998887776654    477899999999988765  1    135677765

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR00518 alaDH alanine dehydrogenase

Probab=96.91  E-value=0.0089  Score=52.58  Aligned_cols=75  Identities=28%  Similarity=0.389  Sum_probs=55.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +.+++++|.|+ |.+|+..++.+...|++|.+++|+.+..+.+...+..    .+..+..+++.+.+.++       ..|
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~----~v~~~~~~~~~l~~~l~-------~aD  232 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG----RIHTRYSNAYEIEDAVK-------RAD  232 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc----eeEeccCCHHHHHHHHc-------cCC
Confidence            35667899988 7899999999999999999999988777666655432    23345556666554443       579


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|++.+
T Consensus       233 vVI~a~~  239 (370)
T TIGR00518       233 LLIGAVL  239 (370)
T ss_pred             EEEEccc
Confidence            9998653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.87  E-value=0.006  Score=51.59  Aligned_cols=47  Identities=28%  Similarity=0.437  Sum_probs=40.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .++|+++|.|+ ||-+++++..|++.|. ++.++.|+.++.+++.+.+.
T Consensus       125 ~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~  172 (283)
T PRK14027        125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVIN  172 (283)
T ss_pred             cCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHh
Confidence            56889999998 8899999999999996 78999999888888877653

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=96.86  E-value=0.0068  Score=52.22  Aligned_cols=154  Identities=16%  Similarity=0.118  Sum_probs=87.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcch--HHHHHHHhCCCc-e--EEEEeeCCCHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNL--GQALADKLGHQD-V--CYIHCDVSNEREVINLVD   93 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~~~-~--~~~~~D~~~~~~~~~~~~   93 (255)
                      .+++.|+|++|.+|.+++..++..|.       ++++.+.+++.  ++.....+.+.. .  .-+...-.++++      
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~------   75 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVITDDPNVA------   75 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEecCcHHH------
Confidence            35799999999999999999998774       79999986443  222222222110 0  001111112221      


Q ss_pred             HHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCc-ccc
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTT-ACT  170 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~-~~~  170 (255)
                           ...-|++|..||...    .  ...+..+   .++.|+.    +++.+.+.+++..  .+.++++|-..-. ...
T Consensus        76 -----~~daDivvitaG~~~----k--~g~tR~d---ll~~N~~----i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~  137 (322)
T cd01338          76 -----FKDADWALLVGAKPR----G--PGMERAD---LLKANGK----IFTAQGKALNDVASRDVKVLVVGNPCNTNALI  137 (322)
T ss_pred             -----hCCCCEEEEeCCCCC----C--CCCcHHH---HHHHHHH----HHHHHHHHHHhhCCCCeEEEEecCcHHHHHHH
Confidence                 236799999876543    1  1234333   3444544    4566666655443  6777777721100 000


Q ss_pred             cccCc-CCCCCcccccchHHHHHHHHHHHHHhcc
Q 025252          171 EIEGL-CNIPANYYGVSKFGILGLVKSLAAELGR  203 (255)
Q Consensus       171 ~~~~~-~~~~~~~Y~asKaa~~~~~~~la~e~~~  203 (255)
                      ..... +..+...|+.++.--..+...+++.+.-
T Consensus       138 ~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         138 AMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             HHHHcCCCChHheEEehHHHHHHHHHHHHHHhCc
Confidence            11112 2334467999998888899999988643

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.85  E-value=0.0054  Score=51.94  Aligned_cols=48  Identities=29%  Similarity=0.376  Sum_probs=41.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.+|+++|.|+ ||.|++++..|++.|. +|.+++|+.++.+++.+.+.
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~  172 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELN  172 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHH
Confidence            357789999998 7899999999999996 79999999988888877664

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.85  E-value=0.1  Score=43.70  Aligned_cols=174  Identities=14%  Similarity=0.131  Sum_probs=94.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc--CCEEEEE--ec-----Ccc--------hHHHHHHHhCCCceEEEEeeCCCHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN--GAKVVIA--DV-----QDN--------LGQALADKLGHQDVCYIHCDVSNERE   87 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~--g~~v~~~--~r-----~~~--------~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (255)
                      -.|+++|.|+|+|.|++ ++--+.-  |+.-+-+  .|     ++.        ...+...+- .-...-+..|.-+.+.
T Consensus        40 gPKkVLviGaSsGyGLa-~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~k-GlyAksingDaFS~e~  117 (398)
T COG3007          40 GPKKVLVIGASSGYGLA-ARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQK-GLYAKSINGDAFSDEM  117 (398)
T ss_pred             CCceEEEEecCCcccHH-HHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhc-CceeeecccchhhHHH
Confidence            35789999999999987 3333333  4443332  22     111        122222221 1234557789999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEc-CCCcc-ccCcc-----------------------------CCCCCChHHHHHHHhhhh
Q 025252           88 VINLVDTTVAKFGKLDILVNS-GCNLE-YRGFV-----------------------------SILDTPKSDLERLLAVNT  136 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~-a~~~~-~~~~~-----------------------------~~~~~~~~~~~~~~~~n~  136 (255)
                      -+.+++.+++.+|.+|.+|+. |.... .+..+                             .+...+.++.+....  +
T Consensus       118 k~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~--V  195 (398)
T COG3007         118 KQKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVA--V  195 (398)
T ss_pred             HHHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHH--h
Confidence            999999999999999999987 43211 11000                             122224444444332  2


Q ss_pred             hhHH---HHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcE
Q 025252          137 IGGF---LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIR  207 (255)
Q Consensus       137 ~~~~---~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  207 (255)
                      +|--   .++.+++..=.-..+.+-+.-|    +.......+-++. ..-+.+|.=+++-++.+...++..|=+
T Consensus       196 MGGeDWq~WidaLl~advlaeg~kTiAfs----YiG~~iT~~IYw~-GtiG~AK~DLd~~~~~inekLa~~gG~  264 (398)
T COG3007         196 MGGEDWQMWIDALLEADVLAEGAKTIAFS----YIGEKITHPIYWD-GTIGRAKKDLDQKSLAINEKLAALGGG  264 (398)
T ss_pred             hCcchHHHHHHHHHhccccccCceEEEEE----ecCCccccceeec-cccchhhhcHHHHHHHHHHHHHhcCCC
Confidence            2322   2344444321112334444444    2211211111111 346899999999999999998877633

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=96.85  E-value=0.005  Score=52.19  Aligned_cols=44  Identities=18%  Similarity=0.311  Sum_probs=38.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .++.+|+++|+|. |++|+++++.|...|++|.+.+|+++.....
T Consensus       147 ~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~  190 (287)
T TIGR02853       147 FTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARI  190 (287)
T ss_pred             CCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            3678999999999 6799999999999999999999987655443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=96.84  E-value=0.0089  Score=51.17  Aligned_cols=79  Identities=23%  Similarity=0.291  Sum_probs=55.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .++.++|+|+++++|+++++.+...|.+|++++++++..+.+. ....   . ...|..+.+..+.+.+...+  +++|+
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~---~-~~~~~~~~~~~~~~~~~~~~--~~~d~  238 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGA---D-YVIDYRKEDFVREVRELTGK--RGVDV  238 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCC---C-eEEecCChHHHHHHHHHhCC--CCCcE
Confidence            4678999999999999999999999999999998877655543 2221   1 22466665555554443321  36999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++++++
T Consensus       239 ~i~~~g  244 (342)
T cd08266         239 VVEHVG  244 (342)
T ss_pred             EEECCc
Confidence            999754

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>PRK04148 hypothetical protein; Provisional

Probab=96.78  E-value=0.015  Score=43.18  Aligned_cols=55  Identities=13%  Similarity=0.154  Sum_probs=44.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE   85 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~   85 (255)
                      +++++++.|.+  .|.+++..|.+.|++|++++.++...+.+.+.    .+.++..|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~----~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL----GLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh----CCeEEECcCCCC
Confidence            45679999987  78888999999999999999999876655543    467888888874

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.73  E-value=0.0099  Score=51.36  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=52.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .|++++|+|+++++|..+++.....|.+|+.+.+++++.+.+.+.++...  +  .|-.+.++..+.+.+...  +++|+
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~--v--i~~~~~~~~~~~i~~~~~--~gvd~  224 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD--A--FNYKEEPDLDAALKRYFP--NGIDI  224 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce--e--EEcCCcccHHHHHHHhCC--CCcEE
Confidence            47899999999999999998888899999998888777666655454321  1  232222233333333221  47899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       225 v~d~~  229 (338)
T cd08295         225 YFDNV  229 (338)
T ss_pred             EEECC
Confidence            99853

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.68  E-value=0.0076  Score=54.37  Aligned_cols=60  Identities=20%  Similarity=0.243  Sum_probs=47.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   91 (255)
                      +++|.|+ |.+|+++++.|.+.|.+|++++++++..+++.+.   ..+.++.+|.++.+.++++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~---~~~~~~~gd~~~~~~l~~~   61 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR---LDVRTVVGNGSSPDVLREA   61 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh---cCEEEEEeCCCCHHHHHHc
Confidence            5888888 8999999999999999999999988876665542   2466777888877665544

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.67  E-value=0.0055  Score=52.03  Aligned_cols=77  Identities=17%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ..++|-||+|.-|.-++++|+++|....+.+|+.+++..+..++.. +...+.+++  ++.+++..+       +.++++
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-~~~~~p~~~--p~~~~~~~~-------~~~VVl   76 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-EAAVFPLGV--PAALEAMAS-------RTQVVL   76 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-cccccCCCC--HHHHHHHHh-------cceEEE
Confidence            4589999999999999999999999999999999999999988873 444455544  554444433       679999


Q ss_pred             EcCCCcc
Q 025252          107 NSGCNLE  113 (255)
Q Consensus       107 ~~a~~~~  113 (255)
                      |++|...
T Consensus        77 ncvGPyt   83 (382)
T COG3268          77 NCVGPYT   83 (382)
T ss_pred             ecccccc
Confidence            9976543

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.66  E-value=0.013  Score=49.57  Aligned_cols=79  Identities=24%  Similarity=0.353  Sum_probs=53.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|+++++.+...|.+|++++++++..+.+ .++...    ...|..+.+..+.+.+ ... .+++|+
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~~~~~~-~~~-~~~~d~  211 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGAD----VAINYRTEDFAEEVKE-ATG-GRGVDV  211 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCC----EEEeCCchhHHHHHHH-HhC-CCCeEE
Confidence            567899999999999999999999999999998887666555 333311    1234443333333222 211 136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++++.+
T Consensus       212 vi~~~g  217 (323)
T cd05276         212 ILDMVG  217 (323)
T ss_pred             EEECCc
Confidence            998654

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.66  E-value=0.032  Score=50.88  Aligned_cols=84  Identities=15%  Similarity=0.230  Sum_probs=56.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-------------HHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-------------EREVIN   90 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~~~~   90 (255)
                      ..+.+++|.|+ |.+|+..++.+...|++|++++++.+.++...+ ++   ..++..|..+             .+..+.
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~-lG---a~~v~v~~~e~g~~~~gYa~~~s~~~~~~  236 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQS-MG---AEFLELDFKEEGGSGDGYAKVMSEEFIAA  236 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cC---CeEEeccccccccccccceeecCHHHHHH
Confidence            34568999997 889999999999999999999998886554443 43   3344444321             233333


Q ss_pred             HHHHHHHHcCCccEEEEcCCCc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNL  112 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~  112 (255)
                      ..+...+...+.|++|+++-..
T Consensus       237 ~~~~~~e~~~~~DIVI~Talip  258 (511)
T TIGR00561       237 EMELFAAQAKEVDIIITTALIP  258 (511)
T ss_pred             HHHHHHHHhCCCCEEEECcccC
Confidence            3444444456799999976433

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.61  E-value=0.037  Score=46.33  Aligned_cols=39  Identities=18%  Similarity=0.369  Sum_probs=33.0

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecC
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQ   59 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~   59 (255)
                      .+-.+++.+++|.|+ ||+|..+++.|++.| .++.+++.+
T Consensus        24 ~~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D   63 (268)
T PRK15116         24 ALQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMD   63 (268)
T ss_pred             HHHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            345578899999988 689999999999999 688887765

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.60  E-value=0.011  Score=51.24  Aligned_cols=76  Identities=20%  Similarity=0.252  Sum_probs=51.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++++|+|+++++|.++++.....|+ +|+++++++++.+.+.++++...+    .|..+ +++.+.+.+...  +++|++
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~v----i~~~~-~~~~~~i~~~~~--~gvd~v  228 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAA----INYKT-DNVAERLRELCP--EGVDVY  228 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEE----EECCC-CCHHHHHHHHCC--CCceEE
Confidence            7899999999999999888777898 799998887776666665553221    22222 223333333221  469999


Q ss_pred             EEcC
Q 025252          106 VNSG  109 (255)
Q Consensus       106 i~~a  109 (255)
                      +++.
T Consensus       229 id~~  232 (345)
T cd08293         229 FDNV  232 (345)
T ss_pred             EECC
Confidence            9853

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.59  E-value=0.014  Score=50.84  Aligned_cols=79  Identities=18%  Similarity=0.274  Sum_probs=52.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+|+++++|...++.....|.+|+.+++++++.+.+.++++...+    .|-.+.++..+.+.+...  +++|+
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~v----i~~~~~~~~~~~i~~~~~--~gvD~  231 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEA----FNYKEEPDLDAALKRYFP--EGIDI  231 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEE----EECCCcccHHHHHHHHCC--CCcEE
Confidence            478999999999999999888888899999888887766655545543211    232222233333333211  36899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       232 v~d~v  236 (348)
T PLN03154        232 YFDNV  236 (348)
T ss_pred             EEECC
Confidence            99854

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.58  E-value=0.014  Score=50.69  Aligned_cols=42  Identities=24%  Similarity=0.414  Sum_probs=35.7

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQD   60 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~   60 (255)
                      ...+.++++++++|.|+ ||+|..+++.|++.|. ++.++|++.
T Consensus        16 ~~~Q~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~   58 (338)
T PRK12475         16 EEGQRKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY   58 (338)
T ss_pred             HHHHHhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence            44466789999999998 7899999999999996 788888763

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.56  E-value=0.014  Score=50.00  Aligned_cols=74  Identities=27%  Similarity=0.385  Sum_probs=49.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|+++++.+...|.+|+.+.++++..+.+ .++..  ...+  |.   ++..+.+.    ...++|+
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~--~~~~--~~---~~~~~~~~----~~~~~d~  229 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGA--DYVI--DG---SKFSEDVK----KLGGADV  229 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCC--cEEE--ec---HHHHHHHH----hccCCCE
Confidence            467899999999999999999999999999998877655444 33221  1111  21   11222222    2247999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++++++
T Consensus       230 v~~~~g  235 (332)
T cd08259         230 VIELVG  235 (332)
T ss_pred             EEECCC
Confidence            998753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.56  E-value=0.0045  Score=40.81  Aligned_cols=34  Identities=24%  Similarity=0.512  Sum_probs=23.4

Q ss_pred             cC-eEEEEecCCChHHHH--HHHHHHHcCCEEEEEecC
Q 025252           25 QG-RVAIITGGASGIGAS--AAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        25 ~~-k~~lVtGas~giG~a--ia~~l~~~g~~v~~~~r~   59 (255)
                      ++ |++||+|+|+|.|++  |+..| ..|++.+-++..
T Consensus        37 ~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fE   73 (78)
T PF12242_consen   37 NGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFE   73 (78)
T ss_dssp             TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE--
T ss_pred             CCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeec
Confidence            44 789999999999999  66666 567777776654

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.53  E-value=0.046  Score=40.18  Aligned_cols=72  Identities=15%  Similarity=0.236  Sum_probs=52.2

Q ss_pred             EEEEecCCChHHHHHHHHHHH-cCCEEEE-EecCc----------------------chHHHHHHHhCCCceEEEEeeCC
Q 025252           28 VAIITGGASGIGASAAQLFHK-NGAKVVI-ADVQD----------------------NLGQALADKLGHQDVCYIHCDVS   83 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~-~g~~v~~-~~r~~----------------------~~~~~~~~~~~~~~~~~~~~D~~   83 (255)
                      ++.|.|++|.+|+.+++.+.+ .+.+++. ++|++                      ..++++.+.      .-+..|+|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~------~DVvIDfT   75 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE------ADVVIDFT   75 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH-------SEEEEES
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc------CCEEEEcC
Confidence            589999999999999999999 6777655 45555                      123333332      12678999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEE
Q 025252           84 NEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      .++...+.++...++  ++.+++-
T Consensus        76 ~p~~~~~~~~~~~~~--g~~~ViG   97 (124)
T PF01113_consen   76 NPDAVYDNLEYALKH--GVPLVIG   97 (124)
T ss_dssp             -HHHHHHHHHHHHHH--T-EEEEE
T ss_pred             ChHHhHHHHHHHHhC--CCCEEEE
Confidence            999999999988887  7778875

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.53  E-value=0.04  Score=47.41  Aligned_cols=110  Identities=18%  Similarity=0.238  Sum_probs=68.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++.|+|+ |.+|.+++..++..|.  ++++.+++++.++....++.+.     ++.. ..  .+.++          
T Consensus         5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~~~----------   70 (315)
T PRK00066          5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDYSD----------   70 (315)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCHHH----------
Confidence            4568999998 9999999999999886  8999999888766555544321     2222 11  22222          


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                       +..-|++|..||....+      ..+..+   .++.|..    +.+.+.+.+.+ ...+.++++|
T Consensus        71 -~~~adivIitag~~~k~------g~~R~d---ll~~N~~----i~~~i~~~i~~~~~~~~vivvs  122 (315)
T PRK00066         71 -CKDADLVVITAGAPQKP------GETRLD---LVEKNLK----IFKSIVGEVMASGFDGIFLVAS  122 (315)
T ss_pred             -hCCCCEEEEecCCCCCC------CCCHHH---HHHHHHH----HHHHHHHHHHHhCCCeEEEEcc
Confidence             13679999987654311      234433   3344443    34444544443 3467787777

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=96.52  E-value=0.019  Score=49.56  Aligned_cols=74  Identities=27%  Similarity=0.450  Sum_probs=49.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-C-Ccc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-G-KLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~id  103 (255)
                      ++++||+||+||+|...++.....|+.++++..++++.+ ...++..+.+.    |..+.+    +.+++++.. | ++|
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~~lGAd~vi----~y~~~~----~~~~v~~~t~g~gvD  213 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLKELGADHVI----NYREED----FVEQVRELTGGKGVD  213 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHHhcCCCEEE----cCCccc----HHHHHHHHcCCCCce
Confidence            889999999999999988888888977777666666555 55555533222    223222    344444443 2 599


Q ss_pred             EEEEc
Q 025252          104 ILVNS  108 (255)
Q Consensus       104 ~li~~  108 (255)
                      +++..
T Consensus       214 vv~D~  218 (326)
T COG0604         214 VVLDT  218 (326)
T ss_pred             EEEEC
Confidence            99974

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.51  E-value=0.014  Score=57.57  Aligned_cols=75  Identities=15%  Similarity=0.271  Sum_probs=60.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CE-------------EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AK-------------VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~-------------v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   90 (255)
                      +.|.++|.|+ |.+|+..++.|++.+ .+             |.+++++.+..+++.+..+  ++.+++.|++|.+++.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~--~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE--NAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC--CCceEEeecCCHHHHHH
Confidence            4678999997 899999999998753 33             7888888888777777653  57789999999988777


Q ss_pred             HHHHHHHHcCCccEEEEcC
Q 025252           91 LVDTTVAKFGKLDILVNSG  109 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a  109 (255)
                      +++       ++|++|++.
T Consensus       645 ~v~-------~~DaVIsal  656 (1042)
T PLN02819        645 YVS-------QVDVVISLL  656 (1042)
T ss_pred             hhc-------CCCEEEECC
Confidence            655       589999863

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.48  E-value=0.015  Score=49.28  Aligned_cols=49  Identities=14%  Similarity=0.366  Sum_probs=39.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcc---hHHHHHHHhC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDN---LGQALADKLG   71 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~   71 (255)
                      .++++|+++|.|+ ||-+++++..|+..|. ++.++.|+++   +.+++.+.+.
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~  172 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVN  172 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhh
Confidence            3468899999998 6669999999999985 8999999853   6666666654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.42  E-value=0.017  Score=49.54  Aligned_cols=78  Identities=19%  Similarity=0.256  Sum_probs=51.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+|+++++|..+++.....|.+|+.+++++++.+.+ .+++...    ..|-.+.+...+.++....  +++|+
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~----vi~~~~~~~~~~~~~~~~~--~gvdv  210 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDV----AFNYKTVKSLEETLKKASP--DGYDC  210 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCE----EEeccccccHHHHHHHhCC--CCeEE
Confidence            477899999999999999888888899999988887765555 3444211    1232332333343333311  36899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       211 v~d~~  215 (325)
T TIGR02825       211 YFDNV  215 (325)
T ss_pred             EEECC
Confidence            99853

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.40  E-value=0.063  Score=48.91  Aligned_cols=76  Identities=24%  Similarity=0.158  Sum_probs=49.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+|+++|.|+ |++|.++|+.|.++|++|.++++++. ......+.+....+.++..+-..             ....
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~-------------~~~~   78 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT-------------LPED   78 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc-------------ccCC
Confidence            367889999997 77999999999999999999986653 22233333433345554433211             0125


Q ss_pred             ccEEEEcCCCc
Q 025252          102 LDILVNSGCNL  112 (255)
Q Consensus       102 id~li~~a~~~  112 (255)
                      .|.+|...|..
T Consensus        79 ~D~Vv~s~Gi~   89 (480)
T PRK01438         79 TDLVVTSPGWR   89 (480)
T ss_pred             CCEEEECCCcC
Confidence            79998865543

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.39  E-value=0.019  Score=51.54  Aligned_cols=47  Identities=23%  Similarity=0.502  Sum_probs=40.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +.+++++|.|+ |.+|+.+++.|...|. +|++++|+.+...++..+++
T Consensus       180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g  227 (423)
T PRK00045        180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFG  227 (423)
T ss_pred             ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcC
Confidence            67899999987 8999999999999997 79999999888777777654

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.35  E-value=0.025  Score=51.06  Aligned_cols=80  Identities=29%  Similarity=0.403  Sum_probs=54.4

Q ss_pred             eecCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH
Q 025252           23 RLQGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        23 ~~~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      +|.||+++||+|                ||-.|.++|+.+..+|++|.++.-.....       ....+..+.  +.+.+
T Consensus       253 ~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~-------~p~~v~~i~--V~ta~  323 (475)
T PRK13982        253 PLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA-------DPQGVKVIH--VESAR  323 (475)
T ss_pred             ccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC-------CCCCceEEE--ecCHH
Confidence            589999999987                57899999999999999999987432210       112344443  33445


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCcccc
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEYR  115 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~~  115 (255)
                      ++.+.++   +.+ +.|++|++|....+.
T Consensus       324 eM~~av~---~~~-~~Di~I~aAAVaDyr  348 (475)
T PRK13982        324 QMLAAVE---AAL-PADIAIFAAAVADWR  348 (475)
T ss_pred             HHHHHHH---hhC-CCCEEEEecccccee
Confidence            5544444   333 369999987666543

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=96.35  E-value=0.054  Score=46.96  Aligned_cols=75  Identities=21%  Similarity=0.299  Sum_probs=48.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+ .+++...  .  .|..+. ++.+    +.+..+.+|
T Consensus       169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~--v--i~~~~~-~~~~----~~~~~g~~D  237 (343)
T PRK09880        169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADK--L--VNPQND-DLDH----YKAEKGYFD  237 (343)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcE--E--ecCCcc-cHHH----HhccCCCCC
Confidence            5788999986 8999999988888898 588888887766544 3454321  1  233332 2222    222235699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      +++.+.|
T Consensus       238 ~vid~~G  244 (343)
T PRK09880        238 VSFEVSG  244 (343)
T ss_pred             EEEECCC
Confidence            9998643

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.33  E-value=0.01  Score=46.08  Aligned_cols=38  Identities=21%  Similarity=0.415  Sum_probs=34.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++.+|+++|+|++.-.|..+++.|.++|++|.++.|+.
T Consensus        41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            58999999999977789999999999999999988864

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.31  E-value=0.018  Score=51.92  Aligned_cols=75  Identities=21%  Similarity=0.324  Sum_probs=59.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ...+.++|.|+ |.+|+.+++.|.+.|++|++++++++..+++.++..  .+..+.+|.++++.++++-      ..+.|
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~--~~~~i~gd~~~~~~L~~~~------~~~a~  299 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELP--NTLVLHGDGTDQELLEEEG------IDEAD  299 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCC--CCeEEECCCCCHHHHHhcC------CccCC
Confidence            35678999999 889999999999999999999999887777766532  4667889999988765541      13567


Q ss_pred             EEEE
Q 025252          104 ILVN  107 (255)
Q Consensus       104 ~li~  107 (255)
                      .+|.
T Consensus       300 ~vi~  303 (453)
T PRK09496        300 AFIA  303 (453)
T ss_pred             EEEE
Confidence            7775

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.28  E-value=0.026  Score=50.49  Aligned_cols=48  Identities=29%  Similarity=0.542  Sum_probs=41.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.+++++|.|+ |.+|+.+++.|...| .+|++++|+.+...++.++++
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g  225 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELG  225 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC
Confidence            367899999997 999999999999999 789999999887777776654

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.28  E-value=0.029  Score=45.14  Aligned_cols=61  Identities=20%  Similarity=0.362  Sum_probs=45.2

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhCCCceEEEEeeCC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLGHQDVCYIHCDVS   83 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~   83 (255)
                      |-.++++||.++|.|| |..|..-++.|++.|++|.+++.+.. ...++.+   ..++.++.-+..
T Consensus         2 P~~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~   63 (205)
T TIGR01470         2 PVFANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFD   63 (205)
T ss_pred             CeEEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCC
Confidence            4567899999999998 67999999999999999999987654 2333332   235666665544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.26  E-value=0.045  Score=48.45  Aligned_cols=47  Identities=28%  Similarity=0.481  Sum_probs=42.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +++|+++|.|+ |-+|.-++++|+++| .+|+++.|+.++..++.++++
T Consensus       176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            78999999999 569999999999999 688999999999999998876

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.26  E-value=0.031  Score=47.94  Aligned_cols=70  Identities=24%  Similarity=0.474  Sum_probs=51.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +.+++++|.|+ |.+|+.+++.|...| .+|.+++|++++..++.++++.   ..+     +.+++.+.+.       ..
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~~l~-------~a  239 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLELLN-------EA  239 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHHHHh-------cC
Confidence            57899999998 899999999999866 6788999998888888877652   111     2233333332       57


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |++|.+.
T Consensus       240 DvVi~at  246 (311)
T cd05213         240 DVVISAT  246 (311)
T ss_pred             CEEEECC
Confidence            9999853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.25  E-value=0.021  Score=45.76  Aligned_cols=42  Identities=29%  Similarity=0.422  Sum_probs=35.6

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ....+.++++++++|.|. ||+|..+++.|+..|. ++.++|.+
T Consensus        12 g~~~q~kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        12 GEEGQQRLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             CHHHHHHhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence            344566789999999996 7899999999999996 88888876

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.22  E-value=0.022  Score=48.50  Aligned_cols=43  Identities=16%  Similarity=0.229  Sum_probs=36.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA   65 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~   65 (255)
                      ..+.+++++|.|. |++|+.+++.|...|++|.+.+|+.+..+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~  190 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR  190 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence            3467899999998 679999999999999999999998765433

>PLN00203 glutamyl-tRNA reductase

Probab=96.19  E-value=0.029  Score=51.46  Aligned_cols=47  Identities=15%  Similarity=0.288  Sum_probs=42.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +.+++++|.|+ |.+|+.+++.|...|. +|+++.|+.+..+.+.++++
T Consensus       264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~  311 (519)
T PLN00203        264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP  311 (519)
T ss_pred             CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC
Confidence            67899999999 9999999999999996 79999999988888887764

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=96.14  E-value=0.028  Score=44.12  Aligned_cols=46  Identities=22%  Similarity=0.203  Sum_probs=38.1

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ   64 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~   64 (255)
                      ......+.||++.|.|. |.||+++++.+...|.+|+..+|......
T Consensus        28 ~~~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   28 RFPGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TTTBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CCCccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            34445789999999988 78999999999999999999999877654

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.10  E-value=0.013  Score=53.40  Aligned_cols=47  Identities=23%  Similarity=0.371  Sum_probs=40.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL   70 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~   70 (255)
                      ++.+|+++|+|+ ||+|++++..|.+.|++|.+.+|+.++.+++.++.
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~  375 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRC  375 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            467899999996 79999999999999999999999887777766654

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.10  E-value=0.035  Score=44.56  Aligned_cols=42  Identities=21%  Similarity=0.351  Sum_probs=36.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      +|-.+++++|.++|.|| |.+|...++.|.+.|++|+++++..
T Consensus         2 ~Pl~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          2 MPLMIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            35567899999999999 7899999999999999999998654

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.06  E-value=0.022  Score=43.79  Aligned_cols=40  Identities=25%  Similarity=0.418  Sum_probs=35.8

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD   57 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~   57 (255)
                      -+|-.++++||.++|.|| |.+|...++.|.+.|++|.+++
T Consensus         4 ~~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          4 MYPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             ccceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            366778999999999998 6799999999999999999885

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.05  E-value=0.018  Score=40.83  Aligned_cols=39  Identities=28%  Similarity=0.551  Sum_probs=33.1

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .+++++|.++|+|+ |..|..-++.|++.|++|.+++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            47899999999999 7899999999999999999999875

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.02  E-value=0.047  Score=46.23  Aligned_cols=79  Identities=29%  Similarity=0.341  Sum_probs=51.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|.++++.+...|++|+++.++++..+.+ .+++.   . ...+..+.+..+.+.+ ... .+++|+
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~---~-~~~~~~~~~~~~~~~~-~~~-~~~~d~  211 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGA---D-IAINYREEDFVEVVKA-ETG-GKGVDV  211 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCC---c-EEEecCchhHHHHHHH-HcC-CCCeEE
Confidence            477899999999999999999999999999998887665543 33321   1 1123333333332222 111 135999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++++++
T Consensus       212 ~i~~~~  217 (325)
T TIGR02824       212 ILDIVG  217 (325)
T ss_pred             EEECCc
Confidence            998643

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=96.02  E-value=0.018  Score=53.56  Aligned_cols=70  Identities=13%  Similarity=0.151  Sum_probs=54.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ..++|.|. |.+|+.+++.|.++|.++++++.+++..+++.+    .....+.+|.+|++.++++  .+    .+.|.++
T Consensus       418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~----~g~~~i~GD~~~~~~L~~a--~i----~~a~~vi  486 (558)
T PRK10669        418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE----RGIRAVLGNAANEEIMQLA--HL----DCARWLL  486 (558)
T ss_pred             CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----CCCeEEEcCCCCHHHHHhc--Cc----cccCEEE
Confidence            34788887 669999999999999999999999887776654    3577899999999877664  11    2567665


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      -
T Consensus       487 v  487 (558)
T PRK10669        487 L  487 (558)
T ss_pred             E
Confidence            4

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.97  E-value=0.046  Score=47.51  Aligned_cols=41  Identities=24%  Similarity=0.472  Sum_probs=35.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ...+.++++++++|.|+ ||+|..+++.|++.|. ++.+++.+
T Consensus        16 ~~~Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D   57 (339)
T PRK07688         16 EEGQQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRD   57 (339)
T ss_pred             HHHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44566789999999999 7999999999999997 89998876

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.97  E-value=0.047  Score=44.98  Aligned_cols=76  Identities=25%  Similarity=0.361  Sum_probs=50.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++ +|+++++.+...|.+|++++++++..+.+. +....  ..  .|..+.+..+.+.   ....+.+|+
T Consensus       134 ~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~--~~--~~~~~~~~~~~~~---~~~~~~~d~  204 (271)
T cd05188         134 PGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAK-ELGAD--HV--IDYKEEDLEEELR---LTGGGGADV  204 (271)
T ss_pred             CCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCc--ee--ccCCcCCHHHHHH---HhcCCCCCE
Confidence            577899999988 999999999889999999998876655543 33211  11  2333333333322   222357999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      +++++
T Consensus       205 vi~~~  209 (271)
T cd05188         205 VIDAV  209 (271)
T ss_pred             EEECC
Confidence            99864

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.95  E-value=0.041  Score=42.47  Aligned_cols=80  Identities=18%  Similarity=0.183  Sum_probs=56.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---------CceEEEEeeCCCHHHHHHHHHH--H
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---------QDVCYIHCDVSNEREVINLVDT--T   95 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~--~   95 (255)
                      +++-+.|- |-+|..++++|++.|++|.+.+|++++.+++.++-..         .+...+..=+.+.+.+++++..  +
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i   80 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENI   80 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTH
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHH
Confidence            45778887 7899999999999999999999998887777654210         1345556667778888888877  6


Q ss_pred             HHHcCCccEEEE
Q 025252           96 VAKFGKLDILVN  107 (255)
Q Consensus        96 ~~~~g~id~li~  107 (255)
                      .....+=.++|+
T Consensus        81 ~~~l~~g~iiid   92 (163)
T PF03446_consen   81 LAGLRPGKIIID   92 (163)
T ss_dssp             GGGS-TTEEEEE
T ss_pred             hhccccceEEEe
Confidence            554434456665

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.93  E-value=0.048  Score=48.14  Aligned_cols=38  Identities=26%  Similarity=0.413  Sum_probs=32.7

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      +.++++++++|.|+ ||+|..+++.|+..|. ++.+++++
T Consensus       130 q~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d  168 (376)
T PRK08762        130 QRRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD  168 (376)
T ss_pred             HHHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            45678899999977 7899999999999996 78888876

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.91  E-value=0.046  Score=46.78  Aligned_cols=77  Identities=17%  Similarity=0.284  Sum_probs=50.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+|+++++|.++++.....|.+|+.+.+++++.+.+.+ ++...  +  .|-.+.+ ..+.+++...  +++|+
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~-~Ga~~--v--i~~~~~~-~~~~v~~~~~--~gvd~  214 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKE-LGFDA--V--FNYKTVS-LEEALKEAAP--DGIDC  214 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCCE--E--EeCCCcc-HHHHHHHHCC--CCcEE
Confidence            47899999999999999988888899999988888776655544 43211  1  2333222 2222222211  46899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       215 vld~~  219 (329)
T cd08294         215 YFDNV  219 (329)
T ss_pred             EEECC
Confidence            98753

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.91  E-value=0.14  Score=39.34  Aligned_cols=44  Identities=18%  Similarity=0.338  Sum_probs=32.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      ..+.||+++|.|- |.+|+.+|+.|...|++|.+++.++-..-+.
T Consensus        19 ~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA   62 (162)
T PF00670_consen   19 LMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQA   62 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH
T ss_pred             eeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHh
Confidence            4578999999998 7799999999999999999999987554433

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PTZ00117 malate dehydrogenase; Provisional

Probab=95.90  E-value=0.4  Score=41.30  Aligned_cols=112  Identities=21%  Similarity=0.256  Sum_probs=64.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCC----ce-EEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQ----DV-CYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~----~~-~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +.+++.|+|+ |.+|..++..++..| .++++.+.+++......-.+...    .. ..+.. -+|++.+          
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~~~l----------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNYEDI----------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCHHHh----------
Confidence            4567999997 889999999999988 78999999876543222111110    00 11111 1232321          


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is  162 (255)
                       .+-|++|..++.....      ..+..   +.+..|.    -+.+.+.+.+.+. +++.++++|
T Consensus        72 -~~ADiVVitag~~~~~------g~~r~---dll~~n~----~i~~~i~~~i~~~~p~a~vivvs  122 (319)
T PTZ00117         72 -KDSDVVVITAGVQRKE------EMTRE---DLLTING----KIMKSVAESVKKYCPNAFVICVT  122 (319)
T ss_pred             -CCCCEEEECCCCCCCC------CCCHH---HHHHHHH----HHHHHHHHHHHHHCCCeEEEEec
Confidence             2569999987654321      22333   3344455    3445555555433 456677777

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.87  E-value=0.017  Score=47.35  Aligned_cols=38  Identities=24%  Similarity=0.456  Sum_probs=31.9

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      +-++++++++|.|. ||+|..+++.|++.|. ++.++|.+
T Consensus         6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755           6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34578889999998 7899999999999995 78887665

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=95.86  E-value=0.083  Score=45.58  Aligned_cols=72  Identities=18%  Similarity=0.281  Sum_probs=50.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .|+.++|+|.+ |+|.-.++.....|++|++++|++++++...+ +..+    ...|.+|++..+.+-+       ..|+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~-lGAd----~~i~~~~~~~~~~~~~-------~~d~  232 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGAD----HVINSSDSDALEAVKE-------IADA  232 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHHH-hCCc----EEEEcCCchhhHHhHh-------hCcE
Confidence            48899999998 99999888777799999999999887655544 3322    2223334444443322       2899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      +|+.+
T Consensus       233 ii~tv  237 (339)
T COG1064         233 IIDTV  237 (339)
T ss_pred             EEECC
Confidence            99854

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=95.85  E-value=0.085  Score=45.99  Aligned_cols=78  Identities=24%  Similarity=0.386  Sum_probs=51.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH-cCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK-FGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~i  102 (255)
                      -.|+.+||.||++|.|.+.++.....|...+++.++++. .++..+++.+    ...|-.+++    +++++++. .+++
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~-~~l~k~lGAd----~vvdy~~~~----~~e~~kk~~~~~~  226 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEK-LELVKKLGAD----EVVDYKDEN----VVELIKKYTGKGV  226 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccch-HHHHHHcCCc----EeecCCCHH----HHHHHHhhcCCCc
Confidence            367789999999999999888887788555555555554 3455555532    234666633    33333332 4689


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++-+.+
T Consensus       227 DvVlD~vg  234 (347)
T KOG1198|consen  227 DVVLDCVG  234 (347)
T ss_pred             cEEEECCC
Confidence            99998754

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.82  E-value=0.72  Score=36.99  Aligned_cols=69  Identities=23%  Similarity=0.289  Sum_probs=46.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhCC-------------CceEEEEeeCCCHHHHHHHHHH
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLGH-------------QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~-------------~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .+..||+|.||.+++++|++.|++|++.+|+.+ ..+...+.+..             ..+.++-.-   .+.+..+.++
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP---~~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVP---FEAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEecc---HHHHHhHHHH
Confidence            456677799999999999999999999866654 44444444321             233333333   4667777777


Q ss_pred             HHHHcC
Q 025252           95 TVAKFG  100 (255)
Q Consensus        95 ~~~~~g  100 (255)
                      +.+..+
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            776654

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.81  E-value=0.063  Score=44.89  Aligned_cols=43  Identities=16%  Similarity=0.279  Sum_probs=35.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcC----CEEEEEecCcchHHHHHHHhC
Q 025252           29 AIITGGASGIGASAAQLFHKNG----AKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g----~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +.|+|++|.+|..++..|+..|    .++++.|+++++++....++.
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~   47 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQ   47 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHH
Confidence            4689998899999999999988    789999998877666555543

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=95.78  E-value=0.027  Score=45.76  Aligned_cols=41  Identities=22%  Similarity=0.298  Sum_probs=35.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      ++.|+||+|.+|.++++.|++.|++|.+.+|+++..+++.+
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~   42 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAA   42 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHH
Confidence            48899999999999999999999999999998877665544

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.77  E-value=0.24  Score=44.63  Aligned_cols=38  Identities=29%  Similarity=0.441  Sum_probs=33.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .+.+|+++|+|.+ ++|.++++.|+++|++|.+.+....
T Consensus         2 ~~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~   39 (445)
T PRK04308          2 TFQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELK   39 (445)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            3578899999985 8999999999999999999987654

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.76  E-value=0.063  Score=45.51  Aligned_cols=42  Identities=29%  Similarity=0.423  Sum_probs=36.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      ++++++|+|+++++|+++++.+...|.+++.++++++..+.+
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~  185 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL  185 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            467899999999999999999999999999998887665555

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=95.75  E-value=0.092  Score=44.66  Aligned_cols=75  Identities=21%  Similarity=0.312  Sum_probs=55.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCC-CHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS-NEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|+.+.|+|++| ||.--++.--..|++|+++++...+.+++.+.++.+    ...|.+ |++.++++.+..   .+.+|
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd----~fv~~~~d~d~~~~~~~~~---dg~~~  252 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGAD----VFVDSTEDPDIMKAIMKTT---DGGID  252 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcc----eeEEecCCHHHHHHHHHhh---cCcce
Confidence            789999999987 998766666667999999999998888888888754    334666 677666665532   24555


Q ss_pred             EEEE
Q 025252          104 ILVN  107 (255)
Q Consensus       104 ~li~  107 (255)
                      .++|
T Consensus       253 ~v~~  256 (360)
T KOG0023|consen  253 TVSN  256 (360)
T ss_pred             eeee
Confidence            5555

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.75  E-value=0.043  Score=46.38  Aligned_cols=38  Identities=24%  Similarity=0.421  Sum_probs=34.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      .++.||.++|.|.++-.|++++..|.++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            45799999999998889999999999999999888763

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.72  E-value=0.16  Score=37.71  Aligned_cols=34  Identities=24%  Similarity=0.573  Sum_probs=27.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ++++++|.|+ |++|..+++.|+..|. ++.++|.+
T Consensus         1 r~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d   35 (135)
T PF00899_consen    1 RNKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDD   35 (135)
T ss_dssp             HT-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCc
Confidence            3578999998 7899999999999996 68886543

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.71  E-value=0.17  Score=45.54  Aligned_cols=111  Identities=12%  Similarity=0.093  Sum_probs=68.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-------CC--EEEEEecCcchHHHHHHHhCCCc-e--EEEEeeCCCHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKN-------GA--KVVIADVQDNLGQALADKLGHQD-V--CYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-------g~--~v~~~~r~~~~~~~~~~~~~~~~-~--~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++.|+|++|.+|.+++..++..       +.  +++++++++++++....++.+.- .  .-+..-..++++        
T Consensus       102 KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~~~ye~--------  173 (444)
T PLN00112        102 NVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGIDPYEV--------  173 (444)
T ss_pred             EEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEecCCHHH--------
Confidence            5999999999999999999987       54  79999999887666655544311 0  001100123332        


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC--CCCCcEEEec
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP--RRRGCILYTT  162 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~ii~is  162 (255)
                         +..-|++|..||...    +  ...+..+   .++.|+.    +++...+.+.+  .+.+.||++|
T Consensus       174 ---~kdaDiVVitAG~pr----k--pG~tR~d---Ll~~N~~----I~k~i~~~I~~~a~p~~ivIVVs  226 (444)
T PLN00112        174 ---FQDAEWALLIGAKPR----G--PGMERAD---LLDINGQ----IFAEQGKALNEVASRNVKVIVVG  226 (444)
T ss_pred             ---hCcCCEEEECCCCCC----C--CCCCHHH---HHHHHHH----HHHHHHHHHHHhcCCCeEEEEcC
Confidence               236799999776532    1  1233333   3444544    44555555554  4567788777

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.71  E-value=0.21  Score=43.33  Aligned_cols=45  Identities=27%  Similarity=0.468  Sum_probs=37.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+++++|.|+ +++|...++.....|.+|+++++++++.+.+ .+++
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~G  210 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFG  210 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhC
Confidence            4789999999 9999999998888999999998888776655 4444

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=95.70  E-value=0.12  Score=46.58  Aligned_cols=41  Identities=22%  Similarity=0.448  Sum_probs=35.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      ..+.||+++|.|.+ .||+.+++.+...|++|+++++++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            46899999999986 599999999999999999998876543

>PRK05442 malate dehydrogenase; Provisional

Probab=95.67  E-value=0.072  Score=46.03  Aligned_cols=110  Identities=16%  Similarity=0.173  Sum_probs=62.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcch--HHHHHHHhCC------CceEEEEeeCCCHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNL--GQALADKLGH------QDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~------~~~~~~~~D~~~~~~~~~   90 (255)
                      .+++.|+|++|.+|..++..++..+.       ++++.+.++..  +......+.+      .++.+ ..  .+.     
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i-~~--~~y-----   75 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVI-TD--DPN-----   75 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEE-ec--ChH-----
Confidence            34699999999999999999988663       79999986432  2221111111      01111 10  111     


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-C-CCCcEEEec
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-R-RRGCILYTT  162 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~ii~is  162 (255)
                            +....-|++|..||...    ++  ..+..+   .++.|..    +++.+.+.+++ . +.+.++++|
T Consensus        76 ------~~~~daDiVVitaG~~~----k~--g~tR~d---ll~~Na~----i~~~i~~~i~~~~~~~~iiivvs  130 (326)
T PRK05442         76 ------VAFKDADVALLVGARPR----GP--GMERKD---LLEANGA----IFTAQGKALNEVAARDVKVLVVG  130 (326)
T ss_pred             ------HHhCCCCEEEEeCCCCC----CC--CCcHHH---HHHHHHH----HHHHHHHHHHHhCCCCeEEEEeC
Confidence                  12236799998776542    11  234433   3344443    45666666655 3 467788777

>PLN02602 lactate dehydrogenase

Probab=95.62  E-value=0.14  Score=44.63  Aligned_cols=110  Identities=13%  Similarity=0.135  Sum_probs=65.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCc----eEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQD----VCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++.|+|+ |.+|.+++..++..+  .++++.+.+++.......++.+..    ..-+.. -.+++++           .
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~-~~dy~~~-----------~  104 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILA-STDYAVT-----------A  104 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEe-CCCHHHh-----------C
Confidence            58999996 899999999999877  479999998876555444443211    112221 1233321           3


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      .-|++|..||....+      ..+..+   .+..|..    +++.+.+.+++ ..++.++++|
T Consensus       105 daDiVVitAG~~~k~------g~tR~d---ll~~N~~----I~~~i~~~I~~~~p~~ivivvt  154 (350)
T PLN02602        105 GSDLCIVTAGARQIP------GESRLN---LLQRNVA----LFRKIIPELAKYSPDTILLIVS  154 (350)
T ss_pred             CCCEEEECCCCCCCc------CCCHHH---HHHHHHH----HHHHHHHHHHHHCCCeEEEEec
Confidence            679999987754311      233433   2333433    44555544443 3467788777

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.57  E-value=0.11  Score=44.43  Aligned_cols=78  Identities=17%  Similarity=0.265  Sum_probs=51.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|.|+++++|.++++.+...|.+|+.++++++..+.+.+.+...  .+  .|..+.+..+. +.+...  +++|+
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~--~~--~~~~~~~~~~~-v~~~~~--~~~d~  217 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFD--AA--INYKTPDLAEA-LKEAAP--DGIDV  217 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCc--eE--EecCChhHHHH-HHHhcc--CCceE
Confidence            4678999999999999999999999999999988877665554434321  11  22233332222 222211  47999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       218 vi~~~  222 (329)
T cd05288         218 YFDNV  222 (329)
T ss_pred             EEEcc
Confidence            99854

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.56  E-value=1.4  Score=38.06  Aligned_cols=38  Identities=26%  Similarity=0.365  Sum_probs=32.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLG   63 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~   63 (255)
                      +.+++.|.|+ |.+|..++..++..|. ++++.+.+++..
T Consensus         5 ~~~KI~IIGa-G~vG~~ia~~la~~gl~~i~LvDi~~~~~   43 (321)
T PTZ00082          5 KRRKISLIGS-GNIGGVMAYLIVLKNLGDVVLFDIVKNIP   43 (321)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCCchh
Confidence            4467999995 7799999999999994 899999988753

>PLN02928 oxidoreductase family protein

Probab=95.45  E-value=0.075  Score=46.34  Aligned_cols=39  Identities=23%  Similarity=0.266  Sum_probs=35.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      ..+.||++.|.|- |.||+++++.+...|.+|+..+|+..
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~  193 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWT  193 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCC
Confidence            4689999999998 78999999999999999999988743

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=95.45  E-value=0.07  Score=45.75  Aligned_cols=34  Identities=18%  Similarity=0.311  Sum_probs=30.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA--KVVIADVQD   60 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~   60 (255)
                      +++.|+|++|.+|..++..++..|.  +|+++++++
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~   36 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK   36 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence            3689999999999999999999885  599999954

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=95.44  E-value=0.25  Score=39.85  Aligned_cols=86  Identities=22%  Similarity=0.313  Sum_probs=56.2

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC---------C---CceEEEEeeCC
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG---------H---QDVCYIHCDVS   83 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~---------~---~~~~~~~~D~~   83 (255)
                      .+|-.+++++|.++|+|| |..|..=++.|++.|++|++++... +......++.+         .   .....+.+...
T Consensus         3 ~lPl~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~~~~~i~~~~~~~~~~~~~~~~lviaAt~   81 (210)
T COG1648           3 YLPLFLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALIEEGKIKWIEREFDAEDLDDAFLVIAATD   81 (210)
T ss_pred             ccceEEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHHHhcCcchhhcccChhhhcCceEEEEeCC
Confidence            356778999999999999 5688888999999999999987765 33444433322         0   13444444555


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEE
Q 025252           84 NEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      |++--+++++...+    -.+++|
T Consensus        82 d~~ln~~i~~~a~~----~~i~vN  101 (210)
T COG1648          82 DEELNERIAKAARE----RRILVN  101 (210)
T ss_pred             CHHHHHHHHHHHHH----hCCcee
Confidence            55555555554433    246666

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.40  E-value=0.19  Score=43.43  Aligned_cols=111  Identities=17%  Similarity=0.132  Sum_probs=62.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcc--hHHHHHHHhCCCceEEE---EeeCCCHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDN--LGQALADKLGHQDVCYI---HCDVSNEREVINLVDTT   95 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~---~~D~~~~~~~~~~~~~~   95 (255)
                      ++.|+|++|.+|.+++..|+..|.       ++++.+.++.  +.+.....+.+......   ..--.++++        
T Consensus         5 KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~~~~~~~--------   76 (323)
T TIGR01759         5 RVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVATTDPEEA--------   76 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEecChHHH--------
Confidence            589999999999999999998873       7999998652  23333333322110000   000111221        


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-C-CCcEEEec
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-R-RGCILYTT  162 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~~~ii~is  162 (255)
                         ...-|++|..||...    +  ...+..+   .++.|+.-    .+.+.+.+++. + .+.++++|
T Consensus        77 ---~~daDvVVitAG~~~----k--~g~tR~d---ll~~Na~i----~~~i~~~i~~~~~~~~iiivvs  129 (323)
T TIGR01759        77 ---FKDVDAALLVGAFPR----K--PGMERAD---LLSKNGKI----FKEQGKALNKVAKKDVKVLVVG  129 (323)
T ss_pred             ---hCCCCEEEEeCCCCC----C--CCCcHHH---HHHHHHHH----HHHHHHHHHhhCCCCeEEEEeC
Confidence               236799999877542    1  1234433   34445544    45555444443 2 67777777

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.39  E-value=0.051  Score=40.87  Aligned_cols=40  Identities=28%  Similarity=0.471  Sum_probs=36.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .++.||.++|.|-+.-.|+.++..|.++|+.|.++.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            4689999999999999999999999999999999876543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.38  E-value=0.15  Score=42.28  Aligned_cols=40  Identities=20%  Similarity=0.440  Sum_probs=33.6

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+..+++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        25 ~~Q~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   65 (245)
T PRK05690         25 DGQEKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD   65 (245)
T ss_pred             HHHHHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3456789999999999 8999999999999995 67777654

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.34  E-value=0.1  Score=42.68  Aligned_cols=40  Identities=23%  Similarity=0.453  Sum_probs=32.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+.++++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        14 ~~q~~L~~~~VlivG~-GglGs~va~~La~~Gvg~i~lvD~D   54 (228)
T cd00757          14 EGQEKLKNARVLVVGA-GGLGSPAAEYLAAAGVGKLGLVDDD   54 (228)
T ss_pred             HHHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            3455788999999996 7899999999999995 67776443

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.32  E-value=0.12  Score=41.88  Aligned_cols=40  Identities=20%  Similarity=0.382  Sum_probs=34.0

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+.++++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        21 ~~q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         21 KLLEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             HHHHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3455688999999997 8999999999999996 58888776

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=95.31  E-value=0.18  Score=43.15  Aligned_cols=111  Identities=23%  Similarity=0.271  Sum_probs=64.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.|+|+ |++|.+++..|+.++  .++++.+.+++..+-....+.+.     .-..+..| .+.+++           
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~~~-----------   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDYEDL-----------   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CChhhh-----------
Confidence            35899999 999999999998776  38999999965544433333221     11122222 222222           


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .+-|+++-.||....++      .+..++   ++.|..-.-.+.+.+.++   ...+.++.+|
T Consensus        68 ~~aDiVvitAG~prKpG------mtR~DL---l~~Na~I~~~i~~~i~~~---~~d~ivlVvt  118 (313)
T COG0039          68 KGADIVVITAGVPRKPG------MTRLDL---LEKNAKIVKDIAKAIAKY---APDAIVLVVT  118 (313)
T ss_pred             cCCCEEEEeCCCCCCCC------CCHHHH---HHhhHHHHHHHHHHHHhh---CCCeEEEEec
Confidence            36799998776554322      344443   444555444444444433   2357777777

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=95.31  E-value=0.049  Score=42.82  Aligned_cols=41  Identities=20%  Similarity=0.319  Sum_probs=33.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      ++.|.|+ |-+|+.+|..++..|++|++.+++++.+++..+.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~   41 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKR   41 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhH
Confidence            4778898 8899999999999999999999998876665544

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.30  E-value=0.14  Score=41.09  Aligned_cols=40  Identities=23%  Similarity=0.413  Sum_probs=34.7

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+.++++++++|.|+ ||+|..+++.|++.|. +++++|.+
T Consensus        14 ~~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        14 KIVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3445688999999999 7899999999999997 69998887

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []

Probab=95.27  E-value=0.086  Score=38.98  Aligned_cols=44  Identities=18%  Similarity=0.175  Sum_probs=33.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CEEEEE--ecCcchHHHHHHHhCC
Q 025252           29 AIITGGASGIGASAAQLFHKNG--AKVVIA--DVQDNLGQALADKLGH   72 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g--~~v~~~--~r~~~~~~~~~~~~~~   72 (255)
                      +.|.|+||.||.....-+.+..  ++|+.+  .++-+.+.+...++++
T Consensus         1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p   48 (129)
T PF02670_consen    1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKP   48 (129)
T ss_dssp             EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-
T ss_pred             CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCC
Confidence            5789999999999999988877  677664  4555677777777753

In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....

>PRK06223 malate dehydrogenase; Reviewed

Probab=95.23  E-value=1.7  Score=37.09  Aligned_cols=38  Identities=26%  Similarity=0.424  Sum_probs=32.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQA   65 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~   65 (255)
                      +++.|+|+ |.+|..++..++..|. +|++.+++++..+.
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~   41 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQG   41 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHH
Confidence            46899999 8899999999998865 99999998876544

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=95.21  E-value=0.083  Score=39.03  Aligned_cols=87  Identities=16%  Similarity=0.225  Sum_probs=51.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhCC----------CceEEEEeeCCCHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLGH----------QDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      ...++-|.|+ |..|.++++.|.+.|++|..+ +|+.+..+++...+..          .....+.+-+.|. .|..+.+
T Consensus         9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~   86 (127)
T PF10727_consen    9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAE   86 (127)
T ss_dssp             ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHH
T ss_pred             CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHH
Confidence            3446899999 779999999999999998776 5666555665554432          2333444444443 6888888


Q ss_pred             HHHHH--cCCccEEEEcCCCcc
Q 025252           94 TTVAK--FGKLDILVNSGCNLE  113 (255)
Q Consensus        94 ~~~~~--~g~id~li~~a~~~~  113 (255)
                      ++...  ..+=.+++|+.|..+
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHhccCCCCcEEEECCCCCh
Confidence            87654  222248899866543

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.20  E-value=0.15  Score=43.69  Aligned_cols=112  Identities=19%  Similarity=0.184  Sum_probs=62.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC--ceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++.|+|++|.+|.+++..++..+  .++++++.+  +.+-....+.+.  ......+. .+ +++       .+....-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch-------HHhcCCCC
Confidence            58899999999999999999887  589999987  211111112211  11111110 11 111       11223679


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ++|..||....+      ..+..+   .++.|..-.-.+.+.+.++   .+.+.++++|
T Consensus        71 ivvitaG~~~k~------g~tR~d---ll~~N~~i~~~i~~~i~~~---~p~a~vivvt  117 (310)
T cd01337          71 VVVIPAGVPRKP------GMTRDD---LFNINAGIVRDLATAVAKA---CPKALILIIS  117 (310)
T ss_pred             EEEEeCCCCCCC------CCCHHH---HHHHHHHHHHHHHHHHHHh---CCCeEEEEcc
Confidence            999987754311      233333   3445555544444444443   3467888888

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.19  E-value=0.087  Score=43.04  Aligned_cols=36  Identities=25%  Similarity=0.508  Sum_probs=32.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC---EEEEEecC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA---KVVIADVQ   59 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~   59 (255)
                      ++++++++|.|+ |+.|+++++.|.+.|.   ++.+++|+
T Consensus        22 ~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          22 KIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            478899999999 8899999999999996   59999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=95.15  E-value=0.039  Score=41.83  Aligned_cols=41  Identities=20%  Similarity=0.316  Sum_probs=33.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++++|+++-+|+++|..|+++|.+|+..  +.+.-+.+..+.+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~--~~~~y~~lk~~~~   41 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML--SKERYESLKSEAP   41 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe--cHHHHHHHHHHcC
Confidence            5789999999999999999999999998  4455555555543

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.08  E-value=0.17  Score=44.73  Aligned_cols=70  Identities=17%  Similarity=0.223  Sum_probs=51.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH-HHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+|+++|+|++ -+|+.+++.+.+.|++|++++.++..... ..+       ..+..|..|.+.+.++.++.     ++|
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad-------~~~~~~~~d~~~l~~~~~~~-----~id   77 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH-------RSHVIDMLDGDALRAVIERE-----KPD   77 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh-------heEECCCCCHHHHHHHHHHh-----CCC
Confidence            56789999985 68999999999999999999887653211 111       14567788887777766542     689


Q ss_pred             EEEE
Q 025252          104 ILVN  107 (255)
Q Consensus       104 ~li~  107 (255)
                      .++.
T Consensus        78 ~vi~   81 (395)
T PRK09288         78 YIVP   81 (395)
T ss_pred             EEEE
Confidence            8875

>PRK07574 formate dehydrogenase; Provisional

Probab=95.04  E-value=0.22  Score=44.05  Aligned_cols=38  Identities=24%  Similarity=0.339  Sum_probs=34.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ..+.||++.|.|. |.||+++++.|...|.+|+..+|..
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            5689999999998 6799999999999999999999875

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=95.02  E-value=0.15  Score=43.57  Aligned_cols=77  Identities=22%  Similarity=0.303  Sum_probs=50.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+..++|.|+++.+|.++++.....|.+|+.+.++++....+ .+++..  ..  .|..+. +..+.+.+...  +++|+
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~--~v--~~~~~~-~~~~~~~~~~~--~~vd~  210 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCD--RP--INYKTE-DLGEVLKKEYP--KGVDV  210 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCc--eE--EeCCCc-cHHHHHHHhcC--CCCeE
Confidence            467899999999999999998888999999988877665555 334321  11  222222 22233333221  36899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       211 v~~~~  215 (329)
T cd08250         211 VYESV  215 (329)
T ss_pred             EEECC
Confidence            99853

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK08328 hypothetical protein; Provisional

Probab=94.97  E-value=0.12  Score=42.39  Aligned_cols=44  Identities=18%  Similarity=0.348  Sum_probs=35.7

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcch
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNL   62 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~   62 (255)
                      ...+.++++++++|.|+ ||+|.++++.|+..|. ++.++|.+.-.
T Consensus        19 ~~~q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         19 VEGQEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHHHHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            34456688999999998 6899999999999995 68888766443

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=94.96  E-value=0.074  Score=49.94  Aligned_cols=71  Identities=13%  Similarity=0.061  Sum_probs=54.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +..++|.|. |.+|+.+++.|.++|.++++++.+++..++..+    .....+.+|.++++-++++=      ..+-|.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~----~g~~v~~GDat~~~~L~~ag------i~~A~~v  468 (601)
T PRK03659        400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRK----YGYKVYYGDATQLELLRAAG------AEKAEAI  468 (601)
T ss_pred             cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh----CCCeEEEeeCCCHHHHHhcC------CccCCEE
Confidence            346888886 679999999999999999999999887776654    25678899999998776641      1245666


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |.
T Consensus       469 v~  470 (601)
T PRK03659        469 VI  470 (601)
T ss_pred             EE
Confidence            64

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.95  E-value=0.072  Score=44.97  Aligned_cols=39  Identities=23%  Similarity=0.440  Sum_probs=35.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||.++|+|.+.-.|+.+++.|.++|++|.++.+..
T Consensus       154 i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t  192 (286)
T PRK14175        154 IDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS  192 (286)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc
Confidence            358999999999999999999999999999999987653

>PRK08223 hypothetical protein; Validated

Probab=94.94  E-value=0.11  Score=43.87  Aligned_cols=43  Identities=26%  Similarity=0.289  Sum_probs=34.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcc
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDN   61 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~   61 (255)
                      ...+.++++.+++|.|+ ||+|..+++.|+..|. ++.++|.+.-
T Consensus        19 ~e~Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~V   62 (287)
T PRK08223         19 PTEQQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDVF   62 (287)
T ss_pred             HHHHHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCCc
Confidence            34456788999999998 6899999999999995 6778776543

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=94.88  E-value=0.94  Score=38.79  Aligned_cols=112  Identities=19%  Similarity=0.141  Sum_probs=63.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHH-HHHhCCCceEE--EEeeC-CCHHHHHHHHHHHHHHcCC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQAL-ADKLGHQDVCY--IHCDV-SNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~-~~~~~~~~~~~--~~~D~-~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++.|.|+ |.+|..+|..++..|. +|++.+.+++..+.. .+.........  ...-. +|.++       +    ..
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~-------~----~~   69 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASPVGGFDTKVTGTNNYAD-------T----AN   69 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhhccCCCcEEEecCCHHH-------h----CC
Confidence            45889997 8899999999999876 899999976643322 11111100000  01111 22221       1    25


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      -|++|.+++...    .+  +.+..+   .+..|..-...+.+.+.++.   +.+.|+++|
T Consensus        70 aDiVIitag~p~----~~--~~sR~~---l~~~N~~iv~~i~~~I~~~~---p~~~iIv~t  118 (305)
T TIGR01763        70 SDIVVITAGLPR----KP--GMSRED---LLSMNAGIVREVTGRIMEHS---PNPIIVVVS  118 (305)
T ss_pred             CCEEEEcCCCCC----Cc--CCCHHH---HHHHHHHHHHHHHHHHHHHC---CCeEEEEec
Confidence            799998776432    11  223322   44456555555556555542   457788777

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.87  E-value=0.55  Score=42.82  Aligned_cols=45  Identities=22%  Similarity=0.310  Sum_probs=35.7

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      ++..-.+.+|+++|.|. |+.|+++++.|.+.|+.|.+.+++....
T Consensus         7 ~~~~~~~~~~~v~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~~~~   51 (473)
T PRK00141          7 LSALPQELSGRVLVAGA-GVSGRGIAAMLSELGCDVVVADDNETAR   51 (473)
T ss_pred             hhhcccccCCeEEEEcc-CHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence            33333467788999995 7899999999999999999999765543

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.87  E-value=0.064  Score=45.54  Aligned_cols=45  Identities=22%  Similarity=0.347  Sum_probs=38.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .++.||.+.|.|.++-+|+.++..|.++|+.|.++.+.....++.
T Consensus       155 i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~  199 (301)
T PRK14194        155 GDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKAL  199 (301)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHH
Confidence            468999999999999999999999999999999997765544443

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=94.85  E-value=0.2  Score=44.65  Aligned_cols=84  Identities=14%  Similarity=0.089  Sum_probs=49.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC---EEEEEecCcchHHHHHHHhCCC----ceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA---KVVIADVQDNLGQALADKLGHQ----DVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+.+++|.|+++++|...++.+...|.   +|+++++++++.+.+.+.+...    .......|..+.++..+.+.+...
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~  254 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTG  254 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhC
Confidence            357899999999999998776665553   7999999888776655532210    112122333322233333333211


Q ss_pred             HcCCccEEEEcC
Q 025252           98 KFGKLDILVNSG  109 (255)
Q Consensus        98 ~~g~id~li~~a  109 (255)
                       ..++|++|.+.
T Consensus       255 -g~g~D~vid~~  265 (410)
T cd08238         255 -GQGFDDVFVFV  265 (410)
T ss_pred             -CCCCCEEEEcC
Confidence             12589988753

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PLN02494 adenosylhomocysteinase

Probab=94.84  E-value=0.18  Score=45.55  Aligned_cols=40  Identities=25%  Similarity=0.522  Sum_probs=35.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      .+.||+++|.|.+ .||+.+++.+...|++|+++++++...
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~  290 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICA  290 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhh
Confidence            3689999999995 899999999999999999998887543

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=94.84  E-value=0.17  Score=43.51  Aligned_cols=111  Identities=18%  Similarity=0.201  Sum_probs=61.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCC--ceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++.|+|++|.+|.+++..|+..+.  ++++.++++.. .+..+ +.+.  ......+.-.+  +.       .+.+..-|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~-g~a~D-L~~~~~~~~i~~~~~~~--~~-------~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA-GVAAD-LSHIPTAASVKGFSGEE--GL-------ENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc-EEEch-hhcCCcCceEEEecCCC--ch-------HHHcCCCC
Confidence            378999999999999999998874  79999987621 11111 1111  11111101000  11       12224789


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      ++|..||....+      ..+..   +.++.|+.    +.+.+.+.+.+ .+.+.++++|
T Consensus        70 ivvitaG~~~~~------g~~R~---dll~~N~~----I~~~i~~~i~~~~p~~iiivvs  116 (312)
T TIGR01772        70 VVVIPAGVPRKP------GMTRD---DLFNVNAG----IVKDLVAAVAESCPKAMILVIT  116 (312)
T ss_pred             EEEEeCCCCCCC------CccHH---HHHHHhHH----HHHHHHHHHHHhCCCeEEEEec
Confidence            999987754311      22333   33555655    44444444433 3467788877

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=94.82  E-value=0.11  Score=36.05  Aligned_cols=42  Identities=26%  Similarity=0.378  Sum_probs=35.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcC---CEEEEE-ecCcchHHHHHHHhC
Q 025252           29 AIITGGASGIGASAAQLFHKNG---AKVVIA-DVQDNLGQALADKLG   71 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g---~~v~~~-~r~~~~~~~~~~~~~   71 (255)
                      +.|. |+|.+|.++++.|.+.|   .+|.+. +|++++.+++.++++
T Consensus         2 I~iI-G~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~   47 (96)
T PF03807_consen    2 IGII-GAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYG   47 (96)
T ss_dssp             EEEE-STSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCT
T ss_pred             EEEE-CCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhc
Confidence            4455 56899999999999999   899965 999999999888765

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.80  E-value=0.072  Score=48.00  Aligned_cols=42  Identities=24%  Similarity=0.481  Sum_probs=35.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      ++.|+||+|.+|.++++.|.+.|++|.+.+|+++...+...+
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~   43 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE   43 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH
Confidence            589999999999999999999999999999987665444443

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.79  E-value=0.19  Score=44.03  Aligned_cols=40  Identities=20%  Similarity=0.324  Sum_probs=33.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+.++++++++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        21 ~~q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D   61 (355)
T PRK05597         21 QGQQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDD   61 (355)
T ss_pred             HHHHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            3456788999999998 7999999999999995 67776655

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=94.78  E-value=1.4  Score=35.53  Aligned_cols=104  Identities=13%  Similarity=0.142  Sum_probs=65.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---------------CCCceEEEEeeCCCHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---------------GHQDVCYIHCDVSNEREVI   89 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---------------~~~~~~~~~~D~~~~~~~~   89 (255)
                      .+.++|+.|.+.  |+. +..|+++|++|+.++.++...+.+.++.               ...++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~--G~d-a~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGK--SLD-LAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCc--hhH-HHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            456899999875  455 7778899999999999998877654332               12357788889877542  


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                             +..+.+|.++-.+....         .+.+....           .++.+...+  +++|++++++
T Consensus       109 -------~~~~~fD~i~D~~~~~~---------l~~~~R~~-----------~~~~l~~lL--kpgG~~ll~~  152 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALIA---------LPEEMRQR-----------YAAHLLALL--PPGARQLLIT  152 (213)
T ss_pred             -------ccCCCcCEEEechhhcc---------CCHHHHHH-----------HHHHHHHHc--CCCCeEEEEE
Confidence                   01135677765432221         23333322           235566666  3567777666

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.78  E-value=0.18  Score=42.84  Aligned_cols=78  Identities=22%  Similarity=0.238  Sum_probs=50.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+..++|+|+++++|.++++.+...|.+|+.++++++..+.+ .++..   .. ..|..+.+..+.+.+.. . ..++|+
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~---~~-~~~~~~~~~~~~~~~~~-~-~~~~d~  214 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGA---DV-AVDYTRPDWPDQVREAL-G-GGGVTV  214 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCC---CE-EEecCCccHHHHHHHHc-C-CCCceE
Confidence            467899999999999999999999999999998887765554 44432   11 12333333323222111 1 125999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       215 vl~~~  219 (324)
T cd08244         215 VLDGV  219 (324)
T ss_pred             EEECC
Confidence            99853

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=94.77  E-value=0.073  Score=40.97  Aligned_cols=45  Identities=24%  Similarity=0.402  Sum_probs=34.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .++.||+++|.|.|.-+|+.++..|.++|+.|.++......+++.
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~   76 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI   76 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce
Confidence            358999999999999999999999999999999987765544443

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.76  E-value=0.26  Score=42.36  Aligned_cols=110  Identities=15%  Similarity=0.156  Sum_probs=64.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCc----eEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQD----VCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++.|+|+ |.+|.+++..++..|  .++++.+.+++.......++.+..    ..-+.. -+|++++           .
T Consensus         4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~-~~dy~~~-----------~   70 (312)
T cd05293           4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEA-DKDYSVT-----------A   70 (312)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEE-CCCHHHh-----------C
Confidence            46899996 999999999998877  479999998876544444433211    011111 1233321           2


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is  162 (255)
                      +-|++|..||....      ...+..+   .++.|..    +++.+.+.+++. .++.++++|
T Consensus        71 ~adivvitaG~~~k------~g~~R~d---ll~~N~~----i~~~~~~~i~~~~p~~~vivvs  120 (312)
T cd05293          71 NSKVVIVTAGARQN------EGESRLD---LVQRNVD----IFKGIIPKLVKYSPNAILLVVS  120 (312)
T ss_pred             CCCEEEECCCCCCC------CCCCHHH---HHHHHHH----HHHHHHHHHHHhCCCcEEEEcc
Confidence            67999997765431      1234433   3444444    344444444333 467788777

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK14968 putative methyltransferase; Provisional

Probab=94.75  E-value=0.57  Score=36.50  Aligned_cols=71  Identities=25%  Similarity=0.281  Sum_probs=47.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCc--eEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQD--VCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~--~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++++-.|++.|.   ++..+++++.+++.++++++......+...   ..+  +.++.+|+.+..         .+  
T Consensus        23 ~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~---------~~--   88 (188)
T PRK14968         23 KGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEPF---------RG--   88 (188)
T ss_pred             CCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEeccccccc---------cc--
Confidence            56778888887666   455556668999999999876655544332   112  778888875421         11  


Q ss_pred             CCccEEEEcC
Q 025252          100 GKLDILVNSG  109 (255)
Q Consensus       100 g~id~li~~a  109 (255)
                      +.+|+++.|.
T Consensus        89 ~~~d~vi~n~   98 (188)
T PRK14968         89 DKFDVILFNP   98 (188)
T ss_pred             cCceEEEECC
Confidence            2689999864

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=94.75  E-value=0.093  Score=49.45  Aligned_cols=71  Identities=18%  Similarity=0.209  Sum_probs=54.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .+.++|.|. |.+|+.+++.|.++|.++++++.+++..++..+.    ....+.+|.++++-++++      ...+.|.+
T Consensus       400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~----g~~v~~GDat~~~~L~~a------gi~~A~~v  468 (621)
T PRK03562        400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKF----GMKVFYGDATRMDLLESA------GAAKAEVL  468 (621)
T ss_pred             cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhc----CCeEEEEeCCCHHHHHhc------CCCcCCEE
Confidence            456888888 5699999999999999999999998877766542    466788999998876553      11245666


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |.
T Consensus       469 vv  470 (621)
T PRK03562        469 IN  470 (621)
T ss_pred             EE
Confidence            64

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=94.70  E-value=0.24  Score=43.39  Aligned_cols=76  Identities=21%  Similarity=0.271  Sum_probs=47.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  102 (255)
                      .+++++|.|+ +++|...+......|+ +|+++++++++.+.+ .++...    ...|..+.+ .   .+++.+.. +++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~----~~i~~~~~~-~---~~~i~~~~~~g~  260 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGAT----ATVNAGDPN-A---VEQVRELTGGGV  260 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCCc----eEeCCCchh-H---HHHHHHHhCCCC
Confidence            4678999985 8999998888878898 588888887765544 444321    112333322 2   22222222 369


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus       261 d~vid~~G  268 (371)
T cd08281         261 DYAFEMAG  268 (371)
T ss_pred             CEEEECCC
Confidence            99998543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.65  E-value=0.26  Score=43.18  Aligned_cols=78  Identities=19%  Similarity=0.273  Sum_probs=49.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+++|+|+ +++|...+......|. +|+++++++++.+.+ .+++...    ..|..+ .+++.+.+.++..  +++
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~----~i~~~~~~~~~~~~v~~~~~--~g~  256 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATD----CVNPNDYDKPIQEVIVEITD--GGV  256 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCe----EEcccccchhHHHHHHHHhC--CCC
Confidence            3778999985 8999999888878898 798888887766555 4444211    123332 2233333333322  379


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.|
T Consensus       257 d~vid~~G  264 (368)
T TIGR02818       257 DYSFECIG  264 (368)
T ss_pred             CEEEECCC
Confidence            99998644

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=94.61  E-value=0.42  Score=41.36  Aligned_cols=45  Identities=33%  Similarity=0.380  Sum_probs=34.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+++++|+|+ +++|..+++.....|.+ |+++++++++.+.+ ++++
T Consensus       160 ~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~G  205 (347)
T PRK10309        160 EGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLG  205 (347)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC
Confidence            4778999975 99999999888889987 67778777766544 4443

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.56  E-value=0.25  Score=40.76  Aligned_cols=39  Identities=23%  Similarity=0.425  Sum_probs=32.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      .+.++++++++|.|+ ||+|..+++.|+..|. ++.++|.+
T Consensus        18 ~q~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D   57 (240)
T TIGR02355        18 GQEALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFD   57 (240)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            355688999999998 7899999999999994 67777665

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=94.55  E-value=0.57  Score=40.00  Aligned_cols=107  Identities=18%  Similarity=0.224  Sum_probs=63.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           29 AIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +.|.|+ |++|.+++..++..|  .++++.+++++........+.+.     ......+  ++.++           ...
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~~~-----------l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDYAD-----------AAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCHHH-----------hCC
Confidence            357887 679999999999988  68999999988766655544321     1111111  22221           136


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEec
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTT  162 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is  162 (255)
                      -|++|..+|....      ...+..   ..+..|+.    +++.+.+.+++. +++.++++|
T Consensus        67 aDiVIitag~p~~------~~~~R~---~l~~~n~~----i~~~~~~~i~~~~p~~~viv~s  115 (300)
T cd00300          67 ADIVVITAGAPRK------PGETRL---DLINRNAP----ILRSVITNLKKYGPDAIILVVS  115 (300)
T ss_pred             CCEEEEcCCCCCC------CCCCHH---HHHHHHHH----HHHHHHHHHHHhCCCeEEEEcc
Confidence            7999998765431      122333   23333443    445555554433 467788777

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>PLN03139 formate dehydrogenase; Provisional

Probab=94.54  E-value=0.28  Score=43.34  Aligned_cols=38  Identities=21%  Similarity=0.302  Sum_probs=34.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||++.|.|. |.||+.+++.|...|.+|+..++..
T Consensus       195 ~~L~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~  232 (386)
T PLN03139        195 YDLEGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLK  232 (386)
T ss_pred             cCCCCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence            4689999999996 7799999999999999999988864

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.47  E-value=0.27  Score=43.03  Aligned_cols=77  Identities=16%  Similarity=0.253  Sum_probs=50.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .+++...  .  .|..+. ++..+.+.+...  +++
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~--~--i~~~~~~~~~~~~v~~~~~--~g~  257 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATD--C--VNPKDHDKPIQQVLVEMTD--GGV  257 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCE--E--EcccccchHHHHHHHHHhC--CCC
Confidence            4778999975 8999999998888998 688888888776654 4444221  1  233332 234444443322  479


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |+++.+.
T Consensus       258 d~vid~~  264 (368)
T cd08300         258 DYTFECI  264 (368)
T ss_pred             cEEEECC
Confidence            9999854

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=94.46  E-value=0.68  Score=39.66  Aligned_cols=36  Identities=19%  Similarity=0.387  Sum_probs=31.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQ   64 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~   64 (255)
                      ++.|.|+ |.+|..++..|+..|  .++++++++++..+
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~   39 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAE   39 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhh
Confidence            4889998 889999999999999  68999999987654

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.45  E-value=0.25  Score=42.62  Aligned_cols=76  Identities=16%  Similarity=0.205  Sum_probs=48.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++|+|+ +++|..+++.+...|++ |+++++++++.+.+ .+++..    ...|..+.+ .+++. +... ..++|
T Consensus       163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~----~~i~~~~~~-~~~~~-~~~~-~~~~d  233 (339)
T cd08239         163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGAD----FVINSGQDD-VQEIR-ELTS-GAGAD  233 (339)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCC----EEEcCCcch-HHHHH-HHhC-CCCCC
Confidence            4788999986 89999999988889998 88888887765544 444421    112333333 22222 2111 12699


Q ss_pred             EEEEcC
Q 025252          104 ILVNSG  109 (255)
Q Consensus       104 ~li~~a  109 (255)
                      +++.+.
T Consensus       234 ~vid~~  239 (339)
T cd08239         234 VAIECS  239 (339)
T ss_pred             EEEECC
Confidence            999854

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=94.43  E-value=0.25  Score=43.51  Aligned_cols=40  Identities=23%  Similarity=0.429  Sum_probs=33.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ..+.++++.+++|.|+ ||+|..+++.|+..|. ++.+++.+
T Consensus        34 ~~q~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         34 EQQERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHHHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            3455678899999998 7899999999999995 78887665

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.41  E-value=0.28  Score=41.69  Aligned_cols=44  Identities=20%  Similarity=0.183  Sum_probs=37.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      .+.+++|.|+++++|.++++.....|.+++++.++.+..+.+.+
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~  182 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRA  182 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHh
Confidence            46789999999999999999998899999998888776665554

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=94.41  E-value=0.34  Score=41.77  Aligned_cols=48  Identities=19%  Similarity=0.203  Sum_probs=36.3

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+.-.++.||++.|.|. |+||++++++|-..|..+....|.+...++.
T Consensus       154 ~~~g~~~~gK~vgilG~-G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~  201 (336)
T KOG0069|consen  154 WPLGYDLEGKTVGILGL-GRIGKAIAKRLKPFGCVILYHSRTQLPPEEA  201 (336)
T ss_pred             ccccccccCCEEEEecC-cHHHHHHHHhhhhccceeeeecccCCchhhH
Confidence            33345689999999999 6799999999999995566666665544443

>PLN02740 Alcohol dehydrogenase-like

Probab=94.40  E-value=0.28  Score=43.24  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=50.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|.|+ +++|...++.+...|+ +|+++++++++.+.+ .+++..  .+  .|..+. ++..+.+.+...  +++
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga~--~~--i~~~~~~~~~~~~v~~~~~--~g~  269 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGIT--DF--INPKDSDKPVHERIREMTG--GGV  269 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCCc--EE--EecccccchHHHHHHHHhC--CCC
Confidence            4778999986 8999999988888998 688888887766555 344321  12  233332 223333333322  369


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.|
T Consensus       270 dvvid~~G  277 (381)
T PLN02740        270 DYSFECAG  277 (381)
T ss_pred             CEEEECCC
Confidence            99998654

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=94.31  E-value=0.23  Score=42.37  Aligned_cols=41  Identities=24%  Similarity=0.406  Sum_probs=36.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      +++++|.|+++++|.++++.....|.+|+++.+++++.+.+
T Consensus       147 ~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  187 (326)
T cd08289         147 QGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL  187 (326)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH
Confidence            57899999999999999999988999999998888776555

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.31  E-value=0.59  Score=40.51  Aligned_cols=62  Identities=19%  Similarity=0.324  Sum_probs=44.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH-------HHHHhCCCceEEEEeeCCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-------LADKLGHQDVCYIHCDVSN   84 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~-------~~~~~~~~~~~~~~~D~~~   84 (255)
                      ..+.++++.|.|. |.||+++|+.|...|.+|+..++++.....       +.+.+....+..+.+-.+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~  210 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANK  210 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcH
Confidence            4689999999987 679999999999999999999987643221       1222233455556655543

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.30  E-value=0.33  Score=42.47  Aligned_cols=74  Identities=19%  Similarity=0.352  Sum_probs=47.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|.|+ +++|..+++.....|++|++++.+.++..+...+++...  .  .|..+.+.+.       +..+.+|+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~--v--i~~~~~~~~~-------~~~~~~D~  250 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADS--F--LVSTDPEKMK-------AAIGTMDY  250 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcE--E--EcCCCHHHHH-------hhcCCCCE
Confidence            5778999775 899999998888889999888777665555555544211  1  1333332222       12246899


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.+
T Consensus       251 vid~~g  256 (360)
T PLN02586        251 IIDTVS  256 (360)
T ss_pred             EEECCC
Confidence            998543

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=94.27  E-value=0.1  Score=43.85  Aligned_cols=44  Identities=23%  Similarity=0.369  Sum_probs=37.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHh
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKL   70 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~   70 (255)
                      +|+++|.|+ ||-+++++..|.+.|. +|.++.|+.++.+++.+.+
T Consensus       122 ~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~  166 (272)
T PRK12550        122 DLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELY  166 (272)
T ss_pred             CCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHh
Confidence            467999997 8999999999999996 6999999998888777654

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.27  E-value=0.44  Score=40.60  Aligned_cols=42  Identities=36%  Similarity=0.533  Sum_probs=36.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+.+++|.|+++++|+++++.+...|.+++++.++++..+.+
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  181 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC  181 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999999988888877766555

>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional

Probab=94.27  E-value=0.32  Score=42.75  Aligned_cols=46  Identities=20%  Similarity=0.250  Sum_probs=36.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc--CCEEEEE--ecCcchHHHHHHHhCC
Q 025252           27 RVAIITGGASGIGASAAQLFHKN--GAKVVIA--DVQDNLGQALADKLGH   72 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~--g~~v~~~--~r~~~~~~~~~~~~~~   72 (255)
                      |++.|.|+||+||.+....+.+.  ..+|+.+  +++.+.+.+.+++++.
T Consensus         2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p   51 (385)
T PRK05447          2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRP   51 (385)
T ss_pred             ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCC
Confidence            67999999999999999888764  4677665  5667788888888764

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.26  E-value=1.3  Score=40.56  Aligned_cols=37  Identities=27%  Similarity=0.502  Sum_probs=32.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++.+|+++|.|. |+.|.++|+.|.+.|++|.+.+.+.
T Consensus         4 ~~~~~~i~v~G~-G~sG~s~a~~L~~~G~~v~~~D~~~   40 (498)
T PRK02006          4 DLQGPMVLVLGL-GESGLAMARWCARHGARLRVADTRE   40 (498)
T ss_pred             ccCCCEEEEEee-cHhHHHHHHHHHHCCCEEEEEcCCC
Confidence            456788999996 6799999999999999999988754

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=94.24  E-value=0.77  Score=40.63  Aligned_cols=108  Identities=14%  Similarity=0.176  Sum_probs=63.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC-E----EEE--E--ecCcchHHHHHHHhCCC------ceEEEEeeCCCHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA-K----VVI--A--DVQDNLGQALADKLGHQ------DVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~-~----v~~--~--~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~   92 (255)
                      ++.|+|++|.+|.+++..++..+. .    +.+  .  ++++++++....++.+.      ++. +..  .+.++     
T Consensus        46 KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y~~-----  117 (387)
T TIGR01757        46 NVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPYEV-----  117 (387)
T ss_pred             EEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCHHH-----
Confidence            599999999999999999998763 2    333  4  77777655554444321      111 111  22222     


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-C-CCCcEEEec
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-R-RRGCILYTT  162 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~-~~~~ii~is  162 (255)
                            +..-|++|..||...    ++  ..+..+   .++.|+.    +++...+.+++ . +.+.++++|
T Consensus       118 ------~kdaDIVVitAG~pr----kp--g~tR~d---ll~~N~~----I~k~i~~~I~~~a~~~~iviVVs  170 (387)
T TIGR01757       118 ------FEDADWALLIGAKPR----GP--GMERAD---LLDINGQ----IFADQGKALNAVASKNCKVLVVG  170 (387)
T ss_pred             ------hCCCCEEEECCCCCC----CC--CCCHHH---HHHHHHH----HHHHHHHHHHHhCCCCeEEEEcC
Confidence                  236799999876542    11  233333   3444544    44555555544 2 567777777

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.21  E-value=0.42  Score=42.11  Aligned_cols=74  Identities=16%  Similarity=0.350  Sum_probs=47.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|.|+ +++|...++.....|++|++++++.+...+...+++...  +  .|..+.+.+.       +..+++|+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~--~--i~~~~~~~v~-------~~~~~~D~  245 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADS--F--LVTTDSQKMK-------EAVGTMDF  245 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcE--E--EcCcCHHHHH-------HhhCCCcE
Confidence            4778999886 899999999888899999888877655444444444211  1  2333322221       22246899


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.|
T Consensus       246 vid~~G  251 (375)
T PLN02178        246 IIDTVS  251 (375)
T ss_pred             EEECCC
Confidence            998643

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.20  E-value=0.25  Score=42.64  Aligned_cols=63  Identities=25%  Similarity=0.309  Sum_probs=45.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchH---------HHHHHHhCCCceEEEEeeCCCH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLG---------QALADKLGHQDVCYIHCDVSNE   85 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~---------~~~~~~~~~~~~~~~~~D~~~~   85 (255)
                      ..+.|||+.|.|. |.||+.+++++..-|.+|+..++. ....         ..+.+-+....+..+.+-+|+.
T Consensus       138 ~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~e  210 (324)
T COG0111         138 TELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPE  210 (324)
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcc
Confidence            4688999999998 679999999999999999999983 2211         1122233335666666666654

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.18  E-value=0.32  Score=41.10  Aligned_cols=75  Identities=23%  Similarity=0.322  Sum_probs=49.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|.|+++++|.++++.....|.+|+.+.++++..+.+ .+++-   ..+..+  +. +..+.+.+.   -+++|+
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~---~~~~~~--~~-~~~~~i~~~---~~~~d~  211 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGA---DEVVID--DG-AIAEQLRAA---PGGFDK  211 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCC---cEEEec--Cc-cHHHHHHHh---CCCceE
Confidence            467899999999999999999999999999888887655444 44432   222112  11 222222222   236999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       212 vl~~~  216 (320)
T cd08243         212 VLELV  216 (320)
T ss_pred             EEECC
Confidence            99854

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=94.07  E-value=0.37  Score=40.47  Aligned_cols=42  Identities=19%  Similarity=0.273  Sum_probs=36.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      ++++++|.|+++++|.++++.....|.+|+.++++++..+.+
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  177 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA  177 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH
Confidence            577899999999999999999988999999988877665555

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=94.05  E-value=0.52  Score=40.47  Aligned_cols=38  Identities=29%  Similarity=0.302  Sum_probs=34.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ..+.||++.|.|- |.||+++|+.+..-|.+|+..++..
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~~  178 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTSG  178 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCCc
Confidence            4689999999998 7899999999999999999988753

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=94.05  E-value=0.64  Score=39.93  Aligned_cols=39  Identities=18%  Similarity=0.154  Sum_probs=34.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      ..+.+|++.|.|- |.||+++++.|...|++|+..++...
T Consensus       132 ~~l~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~  170 (312)
T PRK15469        132 YHREDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRK  170 (312)
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence            4689999999987 67999999999999999999987643

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=93.99  E-value=0.45  Score=40.42  Aligned_cols=42  Identities=24%  Similarity=0.209  Sum_probs=36.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+.+++|.|+++++|.++++.+...|.+++++.++++..+.+
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~  179 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL  179 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH
Confidence            467899999999999999999999999999988887665544

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=93.97  E-value=0.42  Score=41.81  Aligned_cols=77  Identities=17%  Similarity=0.286  Sum_probs=49.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+++|.|+ +++|...++.....|. +|+++++++++.+.+ ++++..  .+  .|..+. ++..+.+.+...  +++
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~--~~--i~~~~~~~~~~~~v~~~~~--~~~  258 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVT--EF--VNPKDHDKPVQEVIAEMTG--GGV  258 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCc--eE--EcccccchhHHHHHHHHhC--CCC
Confidence            4778999985 8999999888888898 799998887766554 344321  11  232221 234444444322  369


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |+++.+.
T Consensus       259 d~vid~~  265 (369)
T cd08301         259 DYSFECT  265 (369)
T ss_pred             CEEEECC
Confidence            9999853

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.90  E-value=0.17  Score=42.64  Aligned_cols=38  Identities=24%  Similarity=0.463  Sum_probs=34.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      .++.||.++|.|.|.-.|+.++..|.++|+.|.++...
T Consensus       153 i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~  190 (285)
T PRK14191        153 IEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL  190 (285)
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC
Confidence            45789999999999999999999999999999887543

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.81  E-value=0.15  Score=43.28  Aligned_cols=39  Identities=31%  Similarity=0.357  Sum_probs=35.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~   60 (255)
                      .++.||+++|.|-++-+|+.+|+.|.++|+.|.++. |+.
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~  193 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTR  193 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCC
Confidence            357999999999999999999999999999999994 554

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=93.80  E-value=0.44  Score=37.21  Aligned_cols=31  Identities=26%  Similarity=0.516  Sum_probs=26.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGA-KVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~   60 (255)
                      ++|.|+ ||+|..+++.|++.|. ++.++|.+.
T Consensus         2 VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           2 VGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            678886 8999999999999997 588988775

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]

Probab=93.79  E-value=0.7  Score=30.77  Aligned_cols=33  Identities=27%  Similarity=0.485  Sum_probs=29.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ++|.|| |.+|.++|..|.+.|.+|.++.+.+..
T Consensus         2 vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~   34 (80)
T PF00070_consen    2 VVVIGG-GFIGIELAEALAELGKEVTLIERSDRL   34 (80)
T ss_dssp             EEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence            667777 789999999999999999999998764

Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....

>PRK05479 ketol-acid reductoisomerase; Provisional

Probab=93.79  E-value=0.86  Score=39.41  Aligned_cols=39  Identities=21%  Similarity=0.292  Sum_probs=33.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .+++|++.|.|. |.+|.++++.|.+.|.+|++..++...
T Consensus        14 ~L~gktIgIIG~-GsmG~AlA~~L~~sG~~Vvv~~r~~~~   52 (330)
T PRK05479         14 LIKGKKVAIIGY-GSQGHAHALNLRDSGVDVVVGLREGSK   52 (330)
T ss_pred             hhCCCEEEEEee-HHHHHHHHHHHHHCCCEEEEEECCchh
Confidence            478999999987 579999999999999999887776443

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=93.75  E-value=0.4  Score=42.32  Aligned_cols=46  Identities=28%  Similarity=0.393  Sum_probs=37.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+.+++|+|+++++|.+++......|.+++++++++++.+.+. +++
T Consensus       193 ~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G  238 (393)
T cd08246         193 PGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALG  238 (393)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcC
Confidence            4678999999999999999888889999888888776655443 344

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>PRK13243 glyoxylate reductase; Reviewed

Probab=93.75  E-value=0.57  Score=40.66  Aligned_cols=39  Identities=21%  Similarity=0.282  Sum_probs=35.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      ..+.||++.|.|- |.||+++|+.+...|.+|+..+|...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            4689999999999 88999999999999999999988754

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=93.74  E-value=0.72  Score=39.75  Aligned_cols=74  Identities=30%  Similarity=0.416  Sum_probs=47.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+|+++++|.++++.....|.+|+.+.++ . ..+...++..   . ...|..+.+..+.+    .. .+++|+
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~~~~~~g~---~-~~~~~~~~~~~~~l----~~-~~~vd~  230 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIPLVKSLGA---D-DVIDYNNEDFEEEL----TE-RGKFDV  230 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHHHHHHhCC---c-eEEECCChhHHHHH----Hh-cCCCCE
Confidence            38899999999999999999988899998887764 3 2334444432   1 12233333322222    22 247999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       231 vi~~~  235 (350)
T cd08248         231 ILDTV  235 (350)
T ss_pred             EEECC
Confidence            99853

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=93.67  E-value=0.49  Score=41.93  Aligned_cols=43  Identities=26%  Similarity=0.323  Sum_probs=35.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      .+.+++|.|+++++|.++++.+...|++++++.++++..+.+.
T Consensus       189 ~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~  231 (398)
T TIGR01751       189 PGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR  231 (398)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH
Confidence            4678999999999999999888889999888877766554443

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK05562 precorrin-2 dehydrogenase; Provisional

Probab=93.65  E-value=0.44  Score=38.78  Aligned_cols=45  Identities=18%  Similarity=0.089  Sum_probs=37.9

Q ss_pred             ccCccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           15 LPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        15 ~~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .+.+|-+++++++.++|+|| |.++..=++.|++.|++|.+++..-
T Consensus        14 ~~~~pi~l~~~~~~VLVVGG-G~VA~RK~~~Ll~~gA~VtVVap~i   58 (223)
T PRK05562         14 NKYMFISLLSNKIKVLIIGG-GKAAFIKGKTFLKKGCYVYILSKKF   58 (223)
T ss_pred             CCEeeeEEECCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCC
Confidence            45678888899999999999 5688887899999999999987653

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=93.63  E-value=1.3  Score=40.54  Aligned_cols=40  Identities=18%  Similarity=0.316  Sum_probs=33.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ   64 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~   64 (255)
                      +.+++++|.|. |..|++.++.|.+.|++|++.++++...+
T Consensus        10 ~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~   49 (488)
T PRK03369         10 LPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALR   49 (488)
T ss_pred             cCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH
Confidence            36788999996 67999999999999999999997655433

>PRK10637 cysG siroheme synthase; Provisional

Probab=93.61  E-value=1.2  Score=40.48  Aligned_cols=42  Identities=21%  Similarity=0.512  Sum_probs=35.8

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      -+|-++++++|.++|.|| |.++..=++.|++.|++|.+++..
T Consensus         3 ~~P~~~~l~~~~vlvvGg-G~vA~rk~~~ll~~ga~v~visp~   44 (457)
T PRK10637          3 HLPIFCQLRDRDCLLVGG-GDVAERKARLLLDAGARLTVNALA   44 (457)
T ss_pred             eeceEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCC
Confidence            356778999999999999 567777789999999999998765

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=93.59  E-value=0.68  Score=36.95  Aligned_cols=41  Identities=22%  Similarity=0.342  Sum_probs=33.2

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ...+-.+++.+++|.|.+ |+|.++++.|+..|. ++.++|.+
T Consensus        11 ~~~q~~L~~s~VlviG~g-glGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          11 DEAQNKLRSAKVLIIGAG-ALGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHHHHhhCcEEEECCC-HHHHHHHHHHHHcCCCEEEEEECC
Confidence            344556888899999885 599999999999995 58887765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=93.58  E-value=0.77  Score=39.36  Aligned_cols=108  Identities=14%  Similarity=0.194  Sum_probs=63.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           29 AIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +.|.|+ |.+|..+|..++..+.  ++++.+.+++..+.....+.+       .++....   .+.+++           
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~y~~~-----------   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GDYDDC-----------   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CCHHHh-----------
Confidence            678998 8999999999998874  799999987765444433332       1222222   233322           


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is  162 (255)
                      ..-|++|..||....+      ..+.+. .+.++.|.    .+++.+.|.+.+.. .+.++++|
T Consensus        67 ~~aDivvitaG~~~kp------g~tr~R-~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvs  119 (307)
T cd05290          67 ADADIIVITAGPSIDP------GNTDDR-LDLAQTNA----KIIREIMGNITKVTKEAVIILIT  119 (307)
T ss_pred             CCCCEEEECCCCCCCC------CCCchH-HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEec
Confidence            3679999987754311      123111 22333444    34566666655443 56677676

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=93.57  E-value=0.48  Score=40.55  Aligned_cols=76  Identities=17%  Similarity=0.243  Sum_probs=45.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++++|+++++|...++.....|.+|+++++++++.+.+.+ ++..  ..+  |..+.+ ..+.+.+... -.++|+++
T Consensus       145 ~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~-~g~~--~~i--~~~~~~-~~~~v~~~~~-~~~~d~vi  217 (324)
T cd08291         145 KAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKK-IGAE--YVL--NSSDPD-FLEDLKELIA-KLNATIFF  217 (324)
T ss_pred             cEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCc--EEE--ECCCcc-HHHHHHHHhC-CCCCcEEE
Confidence            445555999999999988777789999998888776555543 4321  122  222222 2222222211 12699999


Q ss_pred             EcC
Q 025252          107 NSG  109 (255)
Q Consensus       107 ~~a  109 (255)
                      ++.
T Consensus       218 d~~  220 (324)
T cd08291         218 DAV  220 (324)
T ss_pred             ECC
Confidence            854

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=93.55  E-value=0.52  Score=40.56  Aligned_cols=46  Identities=28%  Similarity=0.458  Sum_probs=38.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+..++|.|+++++|.++++.+...|.+|+.+.++++..+.+ ++++
T Consensus       165 ~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g  210 (341)
T cd08297         165 PGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELG  210 (341)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcC
Confidence            467899999999999999999999999999999887765544 4443

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=93.49  E-value=0.4  Score=40.41  Aligned_cols=42  Identities=29%  Similarity=0.437  Sum_probs=36.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+++++|+|+++++|.+++..+...|..|+.++++.+..+.+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~  180 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA  180 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH
Confidence            467899999999999999999999999999998887665544

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=93.49  E-value=0.18  Score=45.04  Aligned_cols=41  Identities=24%  Similarity=0.468  Sum_probs=36.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ   64 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~   64 (255)
                      .+.||+++|+|. |.+|+.+++.+...|++|+++++++.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~  249 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICAL  249 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhH
Confidence            468999999998 68999999999999999999998876543

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=93.44  E-value=0.2  Score=44.62  Aligned_cols=44  Identities=27%  Similarity=0.494  Sum_probs=37.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      .+.|++++|.|+ |.||+.+++.+...|++|+++++++.+.....
T Consensus       199 ~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~  242 (413)
T cd00401         199 MIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA  242 (413)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH
Confidence            368999999999 57999999999999999999998877654433

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=93.42  E-value=0.19  Score=42.37  Aligned_cols=39  Identities=28%  Similarity=0.451  Sum_probs=34.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||+++|.|.|.-+|+.++..|.++|+.|.++....
T Consensus       154 i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t  192 (285)
T PRK14189        154 IPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKT  192 (285)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCC
Confidence            357999999999999999999999999999998875443

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=93.39  E-value=1.4  Score=36.09  Aligned_cols=75  Identities=17%  Similarity=0.143  Sum_probs=51.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++.+++++=+|.++|   .++..+++.|++|..+|-.++..+.....-....+.   .|-     ....++++.+..+++
T Consensus        57 ~l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~---i~y-----~~~~~edl~~~~~~F  125 (243)
T COG2227          57 DLPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVN---IDY-----RQATVEDLASAGGQF  125 (243)
T ss_pred             CCCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhcccc---ccc-----hhhhHHHHHhcCCCc
Confidence            378999999999998   688999999999999999988766555332212222   111     112233443333689


Q ss_pred             cEEEEc
Q 025252          103 DILVNS  108 (255)
Q Consensus       103 d~li~~  108 (255)
                      |++++.
T Consensus       126 DvV~cm  131 (243)
T COG2227         126 DVVTCM  131 (243)
T ss_pred             cEEEEh
Confidence            999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-35
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		4e-16
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		8e-14
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		1e-13
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-13
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-13
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		8e-13
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-12
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		5e-12
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		5e-10
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		5e-10
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		9e-10
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		1e-09
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		1e-09
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		1e-09
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-09
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-09
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		2e-09
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		6e-09
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		7e-09
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		8e-09
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-08
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		1e-08
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-08
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		1e-08
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		1e-08
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-08
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-08
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-08
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		3e-08
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-08
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		4e-08
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-08
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-08
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-08
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		6e-08
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		7e-08
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		8e-08
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		8e-08
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		9e-08
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-07
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		1e-07
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		1e-07
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		2e-07
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		2e-07
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		2e-07
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		3e-07
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-07
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-07
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-07
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		4e-07
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-07
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		4e-07
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		5e-07
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-07
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		7e-07
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		8e-07
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		8e-07
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-06
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		1e-06
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-06
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		2e-06
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-06
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		2e-06
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-06
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		2e-06
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		2e-06
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		3e-06
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		3e-06
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		3e-06
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		5e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		5e-06
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		6e-06
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		6e-06
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		7e-06
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		9e-06
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-05
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		1e-05
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		1e-05
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		2e-05
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-05
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-05
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		3e-05
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		3e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-05
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		5e-05
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		5e-05
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-05
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-05
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		5e-05
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		5e-05
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		5e-05
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		6e-05
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		7e-05
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		7e-05
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		8e-05
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		9e-05
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		9e-05
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		1e-04
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		1e-04
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-04
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		1e-04
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-04
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		2e-04
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		2e-04
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		2e-04
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		2e-04
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		2e-04
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		3e-04
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-04
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		4e-04
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-04
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-04
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		4e-04
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		5e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		5e-04
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		5e-04
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		6e-04
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		6e-04
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		7e-04
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		7e-04
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  145 bits (366), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 117/195 (60%), Gaps = 8/195 (4%)
Query: 19  SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDV-CY 77
           SS  RLQ +V               +LF + GAKVVIAD+ D+ GQ + + +G  DV  +
Sbjct: 9   SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISF 68
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +HCDV+ + +V NLVDTT+AK GKLDI+  +   L    + SIL+    D +R++ +N  
Sbjct: 69  VHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPY-SILEAGNEDFKRVMDINVY 127
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G FLVAKHAARVM+P ++G I++       + T  EG+ ++    Y  +K  +LGL  SL
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVF--TASISSFTAGEGVSHV----YTATKHAVLGLTTSL 181
Query: 198 AAELGRYGIRVDCVS 212
             ELG YGIRV+CVS
Sbjct: 182 CTELGEYGIRVNCVS 196

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 81.3 bits (199), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/137 (36%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIG 138
           CDV++E  VI  VD+ V  FGK+D L N   N  Y+G F  + D P  D  R+L +N  G
Sbjct: 63  CDVTSEEAVIGTVDSVVRDFGKIDFLFN---NAGYQGAFAPVQDYPSDDFARVLTINVTG 119
Query: 139 GFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            F V K  +R M+ +  G I+        +   ++G  N+ A  YG SK  I+ L ++ A
Sbjct: 120 AFHVLKAVSRQMITQNYGRIV-----NTASMAGVKGPPNMAA--YGTSKGAIIALTETAA 172
Query: 199 AELGRYGIRVDCVSHTY 215
            +L  Y IRV+ +S  Y
Sbjct: 173 LDLAPYNIRVNAISPGY 189

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 73.9 bits (180), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 88/190 (46%), Gaps = 13/190 (6%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+V               +     GAKVV  D+ D  G+A+A +L      Y+H DV
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL-ADAARYVHLDV 62
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   +    VDT V  FG L +LVN+   L      +I D   ++ +R+L VN  G FL 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG---TIEDYALTEWQRILDVNLTGVFLG 119
Query: 143 AKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAEL 201
            +   + M    RG I+          + IEGL    A + Y  +KF + GL KS A EL
Sbjct: 120 IRAVVKPMKEAGRGSIIN--------ISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 171
Query: 202 GRYGIRVDCV 211
           G  GIRV+ +
Sbjct: 172 GPSGIRVNSI 181

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 90/203 (44%), Gaps = 16/203 (7%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIA----DVQDNLGQALADKLGHQ 73
           +   + L+GRV               Q   + G  VV+A    +      Q L +K G +
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72
Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLL 132
            + +  CDVSN  EV  L++    KFGKLD +VN+ G N  +       + P  +  +++
Sbjct: 73  TMAF-RCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH----PAEEFPLDEFRQVI 127
Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILG 192
            VN  G + V + A  ++       I+          T    + NI A  Y  SK G+  
Sbjct: 128 EVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----MPNISA--YAASKGGVAS 181
Query: 193 LVKSLAAELGRYGIRVDCVSHTY 215
           L K+LA E GRYGIRV+ ++  +
Sbjct: 182 LTKALAKEWGRYGIRVNVIAPGW 204

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 84/175 (48%), Gaps = 15/175 (8%)
Query: 46  FHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           + + GA+V +A    +  Q +AD++         I CDV+   +V  ++D    + G +D
Sbjct: 52  YAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           I V   CN       ++LD P  + +R+   N  G FL A+ AAR MV +  G  +    
Sbjct: 112 IAV---CNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIIT-- 166
Query: 164 XXXXACTEIEG-LCNIP--ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                   + G + NIP   ++Y  SK  ++ L K++A EL  + IRV+ VS  Y
Sbjct: 167 -----TASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGY 216

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 88/169 (52%), Gaps = 11/169 (6%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +LF KNGA VV+ADV ++    +A+++G +    +  DVS+ ++  + V+ T AK+G++D
Sbjct: 45  ELFAKNGAYVVVADVNEDAAVRVANEIGSK-AFGVRVDVSSAKDAESXVEKTTAKWGRVD 103
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           +LVN   N  +    +++  P+   +R+ +VN  G FL +K+   + V RR G       
Sbjct: 104 VLVN---NAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYV--IPVXRRNGGGSIINT 158
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
               A + I          Y  SK  I  L ++ A +  + GIRV+ V+
Sbjct: 159 TSYTATSAIADRT-----AYVASKGAISSLTRAXAXDHAKEGIRVNAVA 202

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DVS+E+++I +VD  VA FG +D LV    N       S++DT   D +R++A+N  G +
Sbjct: 83  DVSDEQQIIAMVDACVAAFGGVDKLV---ANAGVVHLASLIDTTVEDFDRVIAINLRGAW 139
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           L  KHAA  M+ R  G I+              G        YG+SK GI+ L +  AAE
Sbjct: 140 LCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTG-------AYGMSKAGIIQLSRITAAE 192
Query: 201 LGRYGIR 207
           L   GIR
Sbjct: 193 LRSSGIR 199

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+V               +     GAKVV  D+ D  G+A A +L      Y+H DV
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAKVVFGDILDEEGKAXAAEL-ADAARYVHLDV 62
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   +    VDT V  FG L +LVN+   L      +I D   ++ +R+L VN  G FL 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG---TIEDYALTEWQRILDVNLTGVFLG 119
Query: 143 AKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAEL 201
            +   +      RG I+          + IEGL    A + Y  +KF + GL KS A EL
Sbjct: 120 IRAVVKPXKEAGRGSIIN--------ISSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 171
Query: 202 GRYGIRVDCV 211
           G  GIRV+ +
Sbjct: 172 GPSGIRVNSI 181

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 22/176 (12%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +LF K GA++V  D+++   +  A+ +G   V     DV++   V       +A  G+LD
Sbjct: 23  ELFAKEGARLVACDIEEGPLREAAEAVGAHPVV---XDVADPASVERGFAEALAHLGRLD 79
Query: 104 ILVN-SGC---NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL 159
            +V+ +G    N  ++        P  D E +L VN  G FLVAK A+     +  G I+
Sbjct: 80  GVVHYAGITRDNFHWK-------XPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIV 132
Query: 160 YXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                          L N+    Y  S  G++GL ++LA ELGR+GIRV+ ++  +
Sbjct: 133 LTASRVY--------LGNLGQANYAASXAGVVGLTRTLALELGRWGIRVNTLAPGF 180

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 12/171 (7%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAKFGK 101
           +   + GA VV+AD+     +A+A ++         +  DVS+      + D T+A+FG 
Sbjct: 27  EALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGG 86
Query: 102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYX 161
           +D LVN+           +L       ++ ++VN  G     +   + M  R  G I+  
Sbjct: 87  IDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIV-- 144
Query: 162 XXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                    +      + +NYYG++K GI GL + L+ ELG   IR++ ++
Sbjct: 145 --------NQSSTAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIA 187

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 12/167 (7%)
Query: 46  FHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL 105
           F  +GA+VVI D  ++ G+AL  +L      +I CDV+ E +V  LV  T+ +FG+LD +
Sbjct: 29  FVNSGARVVICDKDESGGRALEQEL--PGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV 86
Query: 106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXX 165
           VN+  +  +       +T      +LL +N +G + + K A   +  + +G ++      
Sbjct: 87  VNNAGH--HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLR-KSQGNVINISSL- 142
Query: 166 XXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                 +  +    A  Y  +K  +  + K+LA +   YG+RV+C+S
Sbjct: 143 ------VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS 183

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS E EV  L    + ++G+LD+LVN   N        +L   + D + +L +N  G
Sbjct: 84  KADVSQESEVEALFAAVIERWGRLDVLVN---NAGITRDTLLLRMKRDDWQSVLDLNLGG 140
Query: 139 GFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL ++ AA++M+ +R G I+          + +  + N     Y  +K G++GL K++A
Sbjct: 141 VFLCSRAAAKIMLKQRSGRIINI-------ASVVGEMGNPGQANYSAAKAGVIGLTKTVA 193
Query: 199 AELGRYGIRVDCVSHTY 215
            EL   GI V+ V+  +
Sbjct: 194 KELASRGITVNAVAPGF 210

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 48  KNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI 104
           + GA+V+IAD+ + +     + L   GH DV  +  DV+N   V N V +   + G++DI
Sbjct: 35  EAGARVIIADLDEAMATKAVEDLRMEGH-DVSSVVMDVTNTESVQNAVRSVHEQEGRVDI 93
Query: 105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXX 164
           LV   C       V   D       + + +N  G F   +   R+M+ +++G I+     
Sbjct: 94  LV--ACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIV----- 146
Query: 165 XXXACTEIEGL-CNIPANY--YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
              A   + GL  N P     Y  SK G+   ++SLAAE   +GIR + V+ TY
Sbjct: 147 ---AIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTY 197

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 70  LGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE 129
           +GH D   +  DV++E E+I        +   +DILVN+   +++R  +  L+T  +D +
Sbjct: 73  VGH-DAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNN-AGIQFRKPMIELET--ADWQ 128
Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFG 189
           R++  N    F++ + AA+ M+PR  G I+          +E+      P   Y V+K G
Sbjct: 129 RVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSL----TSELARATVAP---YTVAKGG 181
Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTYGL 217
           I  L +++AAE  +YGI+ + +   Y L
Sbjct: 182 IKMLTRAMAAEWAQYGIQANAIGPGYML 209

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 10/190 (5%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+                + + + GA+V IAD+     +A A ++G    C I  DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPA-ACAIALDV 60
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +++  +   V   + ++G +DILVN+    +      I++  +   +RL A+N  G   +
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNNAALFD---LAPIVEITRESYDRLFAINVSGTLFM 117
Query: 143 AKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +  AR M+   RG  +        A    E L  +    Y  +K  ++ L +S    L 
Sbjct: 118 MQAVARAMIAGGRGGKII--NMASQAGRRGEALVGV----YCATKAAVISLTQSAGLNLI 171
Query: 203 RYGIRVDCVS 212
           R+GI V+ ++
Sbjct: 172 RHGINVNAIA 181

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 17/173 (9%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +L HK G+KV+I+   +   ++L + L       + C+++N+ E  NL    ++K   LD
Sbjct: 32  RLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEV-CNLANKEECSNL----ISKTSNLD 86
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILV   CN         +     D ++++ +N    F++ + A + M+ +R G I+    
Sbjct: 87  ILV---CNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIIN--- 140
Query: 164 XXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                 + I G+   P    Y  SK G++G+ KSL+ E+   GI V+ V+  +
Sbjct: 141 -----ISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGF 188

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 23/153 (15%)
Query: 69  KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC----NLEYRGFVSILDTP 124
           KLG  D   +  DV+N  +V N+V  TV  FG++DILVN+      NL  R         
Sbjct: 51  KLGS-DAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMR-------MK 102
Query: 125 KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP--ANY 182
           + + + ++  N  G FL  K  +R M+ +R G I+            + G+   P  ANY
Sbjct: 103 EEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVN--------IASVVGVTGNPGQANY 154
Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
              +K G++GL K+ A EL    I V+ ++  +
Sbjct: 155 VA-AKAGVIGLTKTSAKELASRNITVNAIAPGF 186

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 14/170 (8%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           + F K GAKVV+ D +D        K    +      DV+ + E I  +   + K+G +D
Sbjct: 340 KWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAI--IKNVIDKYGTID 397
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILVN+   L  R F  +    K + + +  V+ IG F +++ A    V ++ G I+    
Sbjct: 398 ILVNNAGILRDRSFAKM---SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRII---- 450
Query: 164 XXXXACTEIEGL-CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                 T   G+  N     Y  SK GILGL K++A E  +  I+V+ V+
Sbjct: 451 ----NITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           +S +  L+G+V               +L  + GAKV+     ++  QA++D LG      
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  +V+N   +  ++     +FG +DILVN+         + + +   SD+   +  N  
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAAITRDNLLMRMKEEEWSDI---METNLT 119
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F ++K   R M+ +R+G I+          + +  + N     Y  +K G++G  KS+
Sbjct: 120 SIFRLSKAVLRGMMKKRQGRII-------NVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 198 AAELGRYGIRVDCVSHTY 215
           A E+   G+ V+ V+  +
Sbjct: 173 AREVASRGVTVNTVAPGF 190

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 96/212 (45%), Gaps = 39/212 (18%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADV---QDNLGQA------------LA 67
           RLQG+V                   ++GA +V  D+   Q NL  A            L 
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102
Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRG-FVSILDTPKS 126
           ++ G + +     DV +   +  +VD  +A+FG +DILV S   +  +G  VS+ D   S
Sbjct: 103 EEQGRRIIAR-QADVRDLASLQAVVDEALAEFGHIDILV-SNVGISNQGEVVSLTDQQWS 160
Query: 127 DLERLLAVNTIGGFLVAKHAARVMVPR-----RRGCILYXXXXXXXACTEIEGLCNIPA- 180
           D+   L  N IG +    HA R ++P      + G +++         +   GL   P  
Sbjct: 161 DI---LQTNLIGAW----HACRAVLPSMIERGQGGSVIF--------VSSTVGLRGAPGQ 205
Query: 181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           ++Y  SK G+ GL+ SLA E+GR+ IRV+ V+
Sbjct: 206 SHYAASKHGVQGLMLSLANEVGRHNIRVNSVN 237

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 10/191 (5%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHC-- 80
           RL+G++                LF + GAKVV+     N    L D++            
Sbjct: 5   RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAG 64
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV +E     LV+  V +FG LD   N+   L   G +S L          L  N    F
Sbjct: 65  DVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSV--EGWRETLDTNLTSAF 122
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           L AK+    +     G + +             G   +    Y  SK G++GLV++LA E
Sbjct: 123 LAAKYQVPAIAALGGGSLTFTSSF----VGHTAGFAGVAP--YAASKAGLIGLVQALAVE 176
Query: 201 LGRYGIRVDCV 211
           LG  GIRV+ +
Sbjct: 177 LGARGIRVNAL 187

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           +S +  L+G+V               +L  + GAKV+     ++  QA++D LG      
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  +V+N   +  ++     +FG +DILVN+         + + +   SD+   +  N  
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI---METNLT 119
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F ++K   R M+ +R+G I+          + +  + N     Y  +K G++G  KS+
Sbjct: 120 SIFRLSKAVLRGMMKKRQGRII-------NVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 198 AAELGRYGIRVDCVSHTY 215
           A E+   G+ V+ V+  +
Sbjct: 173 AREVASRGVTVNTVAPGF 190

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 36/179 (20%)
Query: 50  GAKVVIADVQDNLGQALADKL-------GHQDVCYIHCDVSNEREVINLVDTTVAKFGKL 102
           G+ VVIA  +    ++ AD+L           V  I C++ NE EV NLV +T+  FGK+
Sbjct: 42  GSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKI 101
Query: 103 DILVNSGC--------NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR 154
           + LVN+G         ++  +G+ ++L+T           N  G F + K      +   
Sbjct: 102 NFLVNNGGGQFLSPAEHISSKGWHAVLET-----------NLTGTFYMCKAVYSSWMKEH 150
Query: 155 RGCILYXXXXXXXACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
            G I+            +      P A + G ++ G+  L KSLA E    GIR++CV+
Sbjct: 151 GGSIVNII---------VPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVA 200

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLA 133
           +V     DV N  +V N+V T +  FG++DILVN   N        +L   + D + +L 
Sbjct: 56  NVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVN---NAGITRDTLMLKMSEKDWDDVLN 112
Query: 134 VNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLC-NIPANYYGVSKFGILG 192
            N    +L  K  +++M+ ++ G I+          T I G+  N     Y  SK G++G
Sbjct: 113 TNLKSAYLCTKAVSKIMLKQKSGKIIN--------ITSIAGIIGNAGQANYAASKAGLIG 164
Query: 193 LVKSLAAELGRYGIRVDCVS 212
             KS+A E    GI  + V+
Sbjct: 165 FTKSIAKEFAAKGIYCNAVA 184

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 15/170 (8%)
Query: 46  FHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           F K GA VV+ D++    +A+A  +         + C+V++E+    ++   + +FGK+ 
Sbjct: 32  FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           +LVN+      + F    D P SD E    +N    F +++ AA  M     G IL    
Sbjct: 92  VLVNNAGGGGPKPF----DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILN--- 144
Query: 164 XXXXACTEIEGL-CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                 + + G   N+    YG SK  +  L +++A ++G  GIRV+ ++
Sbjct: 145 -----ISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIA 189

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 86/194 (44%), Gaps = 11/194 (5%)
Query: 20  SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADV-QDNLGQALADKLGH-QDVCY 77
           SY  L+ +V               + F  N + VV  ++ +D L Q + +  G  ++V  
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DVS +++V   V  T   + ++D+L N+   ++  G   + +      ER+LAVN  
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMD--GVTPVAEVSDELWERVLAVNLY 118
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F  ++    +M+ + +G I+              G    P   Y V+K G++GL +S+
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG----GFAGAP---YTVAKHGLIGLTRSI 171
Query: 198 AAELGRYGIRVDCV 211
           AA  G  GIR   V
Sbjct: 172 AAHYGDQGIRAVAV 185

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           +S +  L+G+V               +L  + GAKV+     ++  QA++D LG      
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  +V+N   +  ++     +FG +DILVN+         + + +   SD+   +  N  
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNADITRDNLLMRMKEEEWSDI---METNLT 119
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F ++K   R M+ +R+G I+          + +  + N     Y  +K G++G  KS+
Sbjct: 120 SIFRLSKAVLRGMMKKRQGRII-------NVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 198 AAELGRYGIRVDCVSHTY 215
           A E+   G+ V+ V+  +
Sbjct: 173 AREVASRGVTVNTVAPGF 190

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 11/195 (5%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           +S +  L+G+V               +L  + GAKV+     ++  QA++D LG      
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  +V+N   +  ++     +FG +DILVN+         + + +   SD+   +  N  
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI---METNLT 119
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F ++K   R M+ +R+G I+          + +  + N     Y  +K G++G  KS+
Sbjct: 120 SIFRLSKAVLRGMMKKRQGRII-------NVGSVVGTMGNAGQANYAAAKAGVIGFTKSM 172
Query: 198 AAELGRYGIRVDCVS 212
           A E+   G+ V+ V+
Sbjct: 173 AREVASRGVTVNTVA 187

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 46  FHKNGAKVVIAD-VQDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
             ++GA VV++   Q N+ QA+A   G    V    C V    +   LV T V   G +D
Sbjct: 35  LAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKLHGGID 94
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILV++     +  F SI+D  +   ++ L +N     L+ K     M  R  G ++    
Sbjct: 95  ILVSNAAVNPF--FGSIMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVI--- 149
Query: 164 XXXXACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                 + I      P  + Y VSK  +LGL K+LA EL    IRV+C++
Sbjct: 150 -----VSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLA 194

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 21  YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVI--ADVQDNLGQALAD--KLGHQDVC 76
           Y  L+G+V                 F    AKVV+     +D     L +  K+G + + 
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
            +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N 
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLENPVSSHEMSLSDWNKVIDTNL 117
Query: 137 IGGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPAN---YYGVSKFGILG 192
            G FL ++ A +  V    +G ++                  IP     +Y  SK G+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHE----------KIPWPLFVHYAASKGGMKL 167
Query: 193 LVKSLAAELGRYGIRVDCV 211
           + K+LA E    GIRV+ +
Sbjct: 168 MTKTLALEYAPKGIRVNNI 186

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 88/198 (44%), Gaps = 11/198 (5%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           +S +  L+G+V               +L  + GAKV+     ++  QA++D LG      
Sbjct: 4   MSQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKG- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  +V+N   +  ++     +FG +DILVN+         + + +   SD+   +  N  
Sbjct: 63  MALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDI---METNLT 119
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             F ++K   R M+ +R+G I+          + +  + N     +  +K G++G  KS+
Sbjct: 120 SIFRLSKAVLRGMMKKRQGRII-------NVGSVVGTMGNAGQANFAAAKAGVIGFTKSM 172
Query: 198 AAELGRYGIRVDCVSHTY 215
           A E+   G+ V+ V+  +
Sbjct: 173 AREVASRGVTVNTVAPGF 190

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 20  SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH 79
           S ++L GR                + FH  GA V +   +++  + +A  LG +DV    
Sbjct: 21  SMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-KDVFVFS 79
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            ++S+ + +  L +    +   +DILVN+        FV + D    D + +LAVN    
Sbjct: 80  ANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQD---QDWDDVLAVNLTAA 136
Query: 140 FLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLA 198
             + +     M+ RR G I+          T I G+   P    Y  +K G++G  K+LA
Sbjct: 137 STLTRELIHSMMRRRYGRIIN--------ITSIVGVVGNPGQTNYCAAKAGLIGFSKALA 188
Query: 199 AELGRYGIRVDCVSHTY 215
            E+    I V+C++  +
Sbjct: 189 QEIASRNITVNCIAPGF 205

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN- 107
            GA  V+ DV ++ G+  A KLG  +  +   +V++E+EV   +     KFG++D+ VN 
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGG-NCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNC 91
Query: 108 SGCNL------EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RR 155
           +G  +      E +  V  L+    D +R++ VN IG F V +  A VM         +R
Sbjct: 92  AGIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 156 GCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           G I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 148 GVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVVTIA 197

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN- 107
            GA  V+ DV ++ G+  A KLG  +  +   +V++E+EV   +     KFG++D+ VN 
Sbjct: 32  QGATAVLLDVPNSEGETEAKKLGG-NCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNC 90
Query: 108 SGCNL------EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RR 155
           +G  +      E +  V  L+    D +R++ VN IG F V +  A VM         +R
Sbjct: 91  AGIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 146
Query: 156 GCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           G I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 147 GVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVVTIA 196

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 25/177 (14%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN- 107
            GA  V+ DV ++ G+  A KLG  +  +   +V++E+EV   +     KFG++D+ VN 
Sbjct: 33  QGATAVLLDVPNSEGETEAKKLGG-NCIFAPANVTSEKEVQAALTLAKEKFGRIDVAVNC 91
Query: 108 SGCNL------EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RR 155
           +G  +      E +  V  L+    D +R++ VN IG F V +  A VM         +R
Sbjct: 92  AGIAVAIKTYHEKKNQVHTLE----DFQRVINVNLIGTFNVIRLVAGVMGQNEPDQGGQR 147
Query: 156 GCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           G I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 148 GVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVVTIA 197

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 14/197 (7%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
           RL G+V                 F + GAKV+I D   ++G+  A  +G  D + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            S+E     L D T   FG +  LVN+      +   S+ +T  ++  +LLAVN  G F 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK---SVEETTTAEWRKLLAVNLDGVFF 119
Query: 142 VAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAE 200
             +   + M  +  G  +          + IEG    P+   Y  SK  +  + KS A +
Sbjct: 120 GTRLGIQRMKNKGLGASIIN-------MSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 201 --LGRYGIRVDCVSHTY 215
             L  Y +RV+ V   Y
Sbjct: 173 CALKDYDVRVNTVHPGY 189

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 21  YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVI--ADVQDNLGQALAD--KLGHQDVC 76
           Y  L+G+V                 F    AKVV+     +D     L +  K+G + + 
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
            +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N 
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLENPVSSHEMSLSDWNKVIDTNL 117
Query: 137 IGGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPAN---YYGVSKFGILG 192
            G FL ++ A +  V    +G ++                  IP     +Y  SK G+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHE----------KIPWPLFVHYAASKGGMKL 167
Query: 193 LVKSLAAELGRYGIRVDCV 211
           + ++LA E    GIRV+ +
Sbjct: 168 MTETLALEYAPKGIRVNNI 186

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 21  YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVI--ADVQDNLGQALAD--KLGHQDVC 76
           Y  L+G+V                 F    AKVV+     +D     L +  K+G + + 
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
            +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N 
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLENPVSSHEMSLSDWNKVIDTNL 117
Query: 137 IGGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPAN---YYGVSKFGILG 192
            G FL ++ A +  V    +G ++                  IP     +Y  SK G+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHE----------KIPWPLFVHYAASKGGMKL 167
Query: 193 LVKSLAAELGRYGIRVDCV 211
           + ++LA E    GIRV+ +
Sbjct: 168 MTETLALEYAPKGIRVNNI 186

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 53.9 bits (128), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS  R    L++   A F +   +V S   +    F  +L   + D ++++AVN  G
Sbjct: 69  QADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF--LLHMSEDDWDKVIAVNLKG 126
Query: 139 GFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
            FLV + AA+ +V    RG I+            +  + N+    Y  SK G++GL ++ 
Sbjct: 127 TFLVTQAAAQALVSNGCRGSIINISSI-------VGKVGNVGQTNYAASKAGVIGLTQTA 179
Query: 198 AAELGRYGIRVDCV 211
           A ELGR+GIR + V
Sbjct: 180 ARELGRHGIRCNSV 193

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 53.9 bits (128), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           Q F + GA V + D++   G+ +A+ +G     +   D+ +ERE +  V+      G++D
Sbjct: 24  QAFAREGALVALCDLRPE-GKEVAEAIGG---AFFQVDLEDERERVRFVEEAAYALGRVD 79
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           +LVN   N       S L     +  R+L VN      ++  AAR M     G I+    
Sbjct: 80  VLVN---NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVN--- 133
Query: 164 XXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                   ++GL     N  Y  SK G++ L +SLA +L    IRV+ V+
Sbjct: 134 -----VASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 17/171 (9%)
Query: 46  FHKNGAKVVIADVQDNLGQALADKL----GHQDVCYIHCDVSNEREVINLVDTTVAKFGK 101
           F   GA VV++D+  +    + D++    G    C   CD+++E+E+  L D  ++K GK
Sbjct: 31  FATAGASVVVSDINADAANHVVDEIQQLGGQAFAC--RCDITSEQELSALADFAISKLGK 88
Query: 102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYX 161
           +DILVN+      + F    D P +D  R   +N    F +++  A  M     G IL  
Sbjct: 89  VDILVNNAGGGGPKPF----DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTI 144
Query: 162 XXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                          NI    Y  SK     LV+++A +LG   IRV+ ++
Sbjct: 145 TSMAAEN-------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIA 188

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 20/172 (11%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +     GAKV+     +N  QA++D LG      +  +V++   + ++++   A+FG++D
Sbjct: 23  ETLAARGAKVIGTATSENGAQAISDYLGANGKGLM-LNVTDPASIESVLEKIRAEFGEVD 81
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILVN+         + + D   +D   ++  N    F ++K   R M+ +R G I+    
Sbjct: 82  ILVNNAGITRDNLLMRMKDEEWND---IIETNLSSVFRLSKAVMRAMMKKRHGRIIT--- 135
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                   I G  N     Y  +K G++G  KSLA E+   GI V+ V+  +
Sbjct: 136 --------IGGQAN-----YAAAKAGLIGFSKSLAREVASRGITVNVVAPGF 174

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 21  YYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVI--ADVQDNLGQALAD--KLGHQDVC 76
           Y  L+G+V                 F    AKVV+     +D     L +  K+G + + 
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61
Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
            +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N 
Sbjct: 62  -VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLANPVSSHEMSLSDWNKVIDTNL 117
Query: 137 IGGFLVAKHAARVMVPRR-RGCILYXXXXXXXACTEIEGLCNIPAN---YYGVSKFGILG 192
            G FL ++ A +  V    +G ++                  IP     +Y  SK G+  
Sbjct: 118 TGAFLGSREAIKYFVENDIKGTVINMSSVHE----------KIPWPLFVHYAASKGGMKL 167
Query: 193 LVKSLAAELGRYGIRVDCV 211
           + ++LA E    GIRV+ +
Sbjct: 168 MTETLALEYAPKGIRVNNI 186

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS 108
            GA  V+ D+ ++ G+A A KLG+ +  +   DV++E++V   +     KFG++D+ VN 
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGN-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC 91
Query: 109 GC--------NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------R 154
                     NL+ +G    L+    D +R+L VN +G F V +  A  M         +
Sbjct: 92  AGIAVASKTYNLK-KGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ 146
Query: 155 RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           RG I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 147 RGVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVMTIA 197

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS 108
            GA  V+ D+ ++ G+A A KLG+ +  +   DV++E++V   +     KFG++D+ VN 
Sbjct: 35  QGASAVLLDLPNSGGEAQAKKLGN-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC 93
Query: 109 GC--------NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------R 154
                     NL+ +G    L+    D +R+L VN +G F V +  A  M         +
Sbjct: 94  AGIAVASKTYNLK-KGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ 148
Query: 155 RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           RG I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 149 RGVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVMTIA 199

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 27/178 (15%)
Query: 49  NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS 108
            GA  V+ D+ ++ G+A A KLG+ +  +   DV++E++V   +     KFG++D+ VN 
Sbjct: 33  QGASAVLLDLPNSGGEAQAKKLGN-NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNC 91
Query: 109 GC--------NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------R 154
                     NL+ +G    L+    D +R+L VN +G F V +  A  M         +
Sbjct: 92  AGIAVASKTYNLK-KGQTHTLE----DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ 146
Query: 155 RGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           RG I+        +    EG     A  Y  SK GI+G+   +A +L   GIRV  ++
Sbjct: 147 RGVII-----NTASVAAFEGQVGQAA--YSASKGGIVGMTLPIARDLAPIGIRVMTIA 197

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 81/172 (47%), Gaps = 11/172 (6%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +     GAKV+     +N  QA++D LG      +  +V++   + ++++   A+FG++D
Sbjct: 23  ETLAARGAKVIGTATSENGAQAISDYLGANGKGLM-LNVTDPASIESVLEKIRAEFGEVD 81
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILVN+         + + D   +D   ++  N    F ++K   R M+ +R G I+    
Sbjct: 82  ILVNNAGITRDNLLMRMKDEEWND---IIETNLSSVFRLSKAVMRAMMKKRHGRIITI-- 136
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                 + +  + N     Y  +K G++G  KSLA E+   GI V+ V+  +
Sbjct: 137 -----GSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGF 183

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 15/169 (8%)
Query: 49  NGAKVVIADVQ----DNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI 104
            GAK+ + DV     +    A+ +     +V     DVS+E +V   V  T  +FG++D 
Sbjct: 36  EGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDG 95
Query: 105 LVNSGCNLEYRGFVSILDT-PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
             N   N    G  +  ++   ++ ++++++N  G FL  +   ++M  +  G ++    
Sbjct: 96  FFN---NAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVV---- 148
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
               +   I G+ N   + Y  +K G++GL ++ A E GRYGIR++ ++
Sbjct: 149 -NTASVGGIRGIGN--QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIA 194

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 68/146 (46%), Gaps = 16/146 (10%)
Query: 69  KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD-ILVNSGCNLEYRGFVSILDTPKSD 127
           KLG Q V  I  D+S   EV+ L D  V+ FG LD ++ NSG  +    +   L+  +  
Sbjct: 68  KLGAQGVA-IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV----WCDELEVTQEL 122
Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPAN-YYGVS 186
            +++  +NT G F VA+   +    RR G I+               +  IP +  Y  S
Sbjct: 123 FDKVFNLNTRGQFFVAQQGLKHC--RRGGRIILTSSIAAV-------MTGIPNHALYAGS 173
Query: 187 KFGILGLVKSLAAELGRYGIRVDCVS 212
           K  + G  ++ A + G  G+ V+C++
Sbjct: 174 KAAVEGFCRAFAVDCGAKGVTVNCIA 199

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 52  KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCN 111
           +VV+ADV D  G A A +LG     Y H DV+ E +   +V     +FG +D LVN+   
Sbjct: 31  RVVLADVLDEEGAATARELGDA-ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNN-AG 88
Query: 112 LEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTE 171
           +    F+      +    +++ +N  G F+  K     M     G I+          + 
Sbjct: 89  ISTGMFLETESVER--FRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN--------ISS 138
Query: 172 IEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
             GL  +   + YG SK+G+ GL K  A ELG   IRV+ V
Sbjct: 139 AAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV 179

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 52.0 bits (123), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 13/161 (8%)
Query: 52  KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCN 111
           +VV+ADV D  G A A +LG     Y H DV+ E +   +V     +FG +D LVN+   
Sbjct: 31  RVVLADVLDEEGAATARELGDA-ARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNN-AG 88
Query: 112 LEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTE 171
           +    F+      +    +++ +N  G F+  K     M     G I+          + 
Sbjct: 89  ISTGMFLETESVER--FRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVN--------ISS 138
Query: 172 IEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
             GL  +   + YG SK+G+ GL K  A ELG   IRV+ V
Sbjct: 139 AAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV 179

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 13/197 (6%)
Query: 20  SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH 79
           S + L GR                +  H  GA V +   ++   + LA +LG + +    
Sbjct: 4   SMFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER-IFVFP 62
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            ++S+   V  L      + G +DILVN+        FV + D    D + +L VN    
Sbjct: 63  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSD---EDWDAVLTVNLTSV 119
Query: 140 FLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLA 198
           F + +     M+ RR G I+          T I G+   P    Y  SK G++G  KSLA
Sbjct: 120 FNLTRELTHPMMRRRNGRIIN--------ITSIVGVTGNPGQANYCASKAGLIGFSKSLA 171
Query: 199 AELGRYGIRVDCVSHTY 215
            E+    + V+C++  +
Sbjct: 172 QEIASRNVTVNCIAPGF 188

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 14/197 (7%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
           RL G+V                 F + GAKV+I     ++G+  A  +G  D + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62
Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            S+E     L D T   FG +  LVN+      +   S+ +T  ++  +LLAVN  G F 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK---SVEETTTAEWRKLLAVNLDGVFF 119
Query: 142 VAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPA-NYYGVSKFGILGLVKSLAAE 200
             +   + M  +  G  +          + IEG    P+   Y  SK  +  + KS A +
Sbjct: 120 GTRLGIQRMKNKGLGASIIN-------MSSIEGFVGDPSLGAYNASKGAVRIMSKSAALD 172
Query: 201 --LGRYGIRVDCVSHTY 215
             L  Y +RV+ V   Y
Sbjct: 173 CALKDYDVRVNTVHPGY 189

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 81/197 (41%), Gaps = 13/197 (6%)
Query: 20  SYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH 79
           S + L GR                +  H  GA V +   ++   + LA +LG + +    
Sbjct: 1   SMFDLTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAELGER-IFVFP 59
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            ++S+   V  L      + G +DILVN+        FV + D    D + +L VN    
Sbjct: 60  ANLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGLFVRMSD---EDWDAVLTVNLTSV 116
Query: 140 FLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLA 198
           F + +     M+ RR G I+          T I G+   P    Y  SK G++G  KSLA
Sbjct: 117 FNLTRELTHPMMRRRNGRIIN--------ITSIVGVTGNPGQANYCASKAGLIGFSKSLA 168
Query: 199 AELGRYGIRVDCVSHTY 215
            E+    + V+C++  +
Sbjct: 169 QEIASRNVTVNCIAPGF 185

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 49  NGAKVVIADVQDN-LGQA---LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI 104
            GA VVI+D  +  LG+    LAD LG   V  + CDV++   V  L+  TV K G+LD+
Sbjct: 46  EGADVVISDYHERRLGETRDQLAD-LGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDV 104
Query: 105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXX 164
           LVN   N    G   ++D    + +R+L V         + A R       G ++     
Sbjct: 105 LVN---NAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNN-- 159
Query: 165 XXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                + +        ++Y  +K G++ L +  A E   +G+R++ VS
Sbjct: 160 ----ASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVS 203

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 11/172 (6%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           +     GAKV+     +N  QA++D LG      +  +V++   + ++++   A+FG++D
Sbjct: 23  ETLAARGAKVIGTATSENGAQAISDYLGANGKGLM-LNVTDPASIESVLEKIRAEFGEVD 81
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILVN+         + + D   +D   ++  N    F ++K   R M+ +R G I+    
Sbjct: 82  ILVNNAGITRDNLLMRMKDEEWND---IIETNLSSVFRLSKAVMRAMMKKRHGRIITI-- 136
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                 + +  + N     +  +K G++G  KSLA E+   GI V+ V+  +
Sbjct: 137 -----GSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNVVAPGF 183

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 98/251 (39%), Gaps = 35/251 (13%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+                 LF + GA +V  D ++ L       L  + +  +  DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVV-ADV 61
Query: 83  SNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           S+ + V  +    + +FG+L  + + +G       +    + P    E++L VN  G FL
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSALSW----NLPLEAWEKVLRVNLTGSFL 117
Query: 142 VAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           VA+ A  V+     G ++            + GL      +Y   K G++GL ++LA EL
Sbjct: 118 VARKAGEVL--EEGGSLVL--------TGSVAGLGAFGLAHYAAGKLGVVGLARTLALEL 167
Query: 202 GRYGIRVDCV-------SHTYGLXXXXXXXXXXXXXLYNMAK------------DDDTSY 242
            R G+RV+ +         T GL             L    +             ++++Y
Sbjct: 168 ARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAY 227
Query: 243 VGKQNLLVNGG 253
           +  Q L V+GG
Sbjct: 228 ITGQALYVDGG 238

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 50.4 bits (119), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 22/192 (11%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+V                 F + GAKV+  D+ ++  Q L    G Q       DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVL---DV 59
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTIGG 139
           + ++++    D    +  +LD+L N        GFV   ++LD  + D +  + +N    
Sbjct: 60  TKKKQI----DQFANEVERLDVLFNVA------GFVHHGTVLDCEEKDWDFSMNLNVRSM 109
Query: 140 FLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           +L+ K     M+ ++ G I+          + ++G+ N     Y  +K  ++GL KS+AA
Sbjct: 110 YLMIKAFLPKMLAQKSGNII----NMSSVASSVKGVVN--RCVYSTTKAAVIGLTKSVAA 163
Query: 200 ELGRYGIRVDCV 211
           +  + GIR +CV
Sbjct: 164 DFIQQGIRCNCV 175

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           ++  + GA+VV+AD+ +      A  +G   V ++  D++NE  V  L+D T+  FG+LD
Sbjct: 29  RVLARAGARVVLADLPETDLAGAAASVGRGAVHHV-VDLTNEVSVRALIDFTIDTFGRLD 87
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           I+ N+  + +    + +        +    VN  G  L+ K+A   ++    G I+    
Sbjct: 88  IVDNNAAHSDPADML-VTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISS 146
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
               A  ++       +  Y  +K  I  L + +A + GR+G+R + ++
Sbjct: 147 ATAHAAYDM-------STAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 74/160 (46%), Gaps = 24/160 (15%)
Query: 67  ADKLGHQDVCYIHCDVSNEREVINLVDTT-VAKFGKLDILVNSGCNLEYRGFVSIL---- 121
           A  LG Q V  + CD S E EV +L +     + G+LD+LVN+     Y G  +IL    
Sbjct: 49  AQSLGGQCVPVV-CDSSQESEVRSLFEQVDREQQGRLDVLVNNA----YAGVQTILNTRN 103
Query: 122 ----DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCN 177
               +TP S  + +  V   G +  + + AR+MVP  +G I+            ++ + N
Sbjct: 104 KAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPG-----SLQYMFN 158
Query: 178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL 217
           +P   YGV K     L    A EL R+G  V CVS   G+
Sbjct: 159 VP---YGVGKAACDKLAADCAHELRRHG--VSCVSLWPGI 193

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV ++  +  LV   + +FG+LD++V +   L +     + D      + ++ VN  G +
Sbjct: 85  DVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTD---EQWDTVIGVNLTGTW 141
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAA 199
              +     M+    G  +          +   GL   P N +Y  SK G+  L  +LA 
Sbjct: 142 RTLRATVPAMIEAGNGGSIVV-------VSSSAGLKATPGNGHYSASKHGLTALTNTLAI 194
Query: 200 ELGRYGIRVDCVSHTY 215
           ELG YGIRV+ + H Y
Sbjct: 195 ELGEYGIRVNSI-HPY 209

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 22/148 (14%)
Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC----NLEYRGFVSILDTPKSDLE 129
           D   I  +V++  EV  ++   V++FG LD+LVN+      NL  R         + + +
Sbjct: 61  DSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMR-------MKEQEWD 113
Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP--ANYYGVSK 187
            ++  N  G F   + A   M+ +R G I+          + + G    P  ANY   +K
Sbjct: 114 DVIDTNLKGVFNCIQKATPQMLRQRSGAIIN--------LSSVVGAVGNPGQANYVA-TK 164
Query: 188 FGILGLVKSLAAELGRYGIRVDCVSHTY 215
            G++GL KS A EL   GI V+ V+  +
Sbjct: 165 AGVIGLTKSAARELASRGITVNAVAPGF 192

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 74/161 (45%), Gaps = 21/161 (13%)
Query: 50  GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSG 109
           GAKVV   + +     ++D        +   DV+NE EV   V+ T  K+G++DILVN  
Sbjct: 38  GAKVVSVSLDEKSDVNVSD--------HFKIDVTNEEEVKEAVEKTTKKYGRIDILVN-- 87
Query: 110 CNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXAC 169
            N     +  +  TP     R++ VN  G +L+AK+   VM+    G I+        A 
Sbjct: 88  -NAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA 146
Query: 170 TEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDC 210
           T+        A  Y  SK  +LGL +S+A +   Y  ++ C
Sbjct: 147 TK-------NAAAYVTSKHALLGLTRSVAID---YAPKIRC 177

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 90/235 (38%), Gaps = 37/235 (15%)
Query: 44  QLFHKNGAKVVIAD-VQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL 102
           + F   GA + IAD V     +A    LG + V  + CDVS   +V       ++ FG+ 
Sbjct: 25  ERFAVEGADIAIADLVPAPEAEAAIRNLGRR-VLTVKCDVSQPGDVEAFGKQVISTFGRC 83
Query: 103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP--RRRGCILY 160
           DILVN   N      +   +      ++   +N   GFL+AK      VP  +R G    
Sbjct: 84  DILVN---NAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAK----AFVPGMKRNGWGRI 136
Query: 161 XXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY--GLX 218
                     +IE        +Y  +K   +G  ++LA++LG+ GI V+ ++ +      
Sbjct: 137 INLTSTTYWLKIEAYT-----HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTAT 191
Query: 219 XXXXXXXXXXXXLYNMAK-------------------DDDTSYVGKQNLLVNGGF 254
                       L NM +                    DD S++  Q L V+GG 
Sbjct: 192 TEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDGGM 246

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 46  FHKNGAKVVIADVQDNLGQAL-----ADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG 100
           F +  AKVVI +  +N  +AL      ++ G Q +  +  DV+ E +V+NLV T + +FG
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAII-VQGDVTKEEDVVNLVQTAIKEFG 92
Query: 101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCIL 159
            LD+++N   N      V   +    +  +++  N  G FL ++ A +  V    +G ++
Sbjct: 93  TLDVMIN---NAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVI 149
Query: 160 YXXXXXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
                     + +  +   P   +Y  SK G+  + ++LA E    GIRV+ +
Sbjct: 150 --------NMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNI 194

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 8/139 (5%)
Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLA 133
           D+  +  D+S       +V   + +FG++D LVN+      + FV   +  + D +  L 
Sbjct: 69  DIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLAKPFV---EXTQEDYDHNLG 125
Query: 134 VNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGL 193
           VN  G F + + AA   + +  G I+             +     P+    ++K G+  +
Sbjct: 126 VNVAGFFHITQRAAAEXLKQGSGHIVSITTSLVD-----QPXVGXPSALASLTKGGLNAV 180
Query: 194 VKSLAAELGRYGIRVDCVS 212
            +SLA E  R G+RV+ VS
Sbjct: 181 TRSLAXEFSRSGVRVNAVS 199

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 77/190 (40%), Gaps = 10/190 (5%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+                     +GA V+++D+     +A A  +G +    I  D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK-ARAIAADI 61
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+   V  L     A  G +DILVN   N     FV+  D       +++ VN  G F+V
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVN---NASIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
Query: 143 AKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +     M    R            + T   G  N+ A  Y  +K G++G  ++LA ELG
Sbjct: 119 TRAGTDQM----RAAGKAGRVISIASNTFFAGTPNMAA--YVAAKGGVIGFTRALATELG 172
Query: 203 RYGIRVDCVS 212
           +Y I  + V+
Sbjct: 173 KYNITANAVT 182

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Query: 46  FHKNGAKVVIADVQDNL----------GQALADKL---GHQDVCYIHCDVSNEREVINLV 92
           F   GA+VV+ D+   L           Q++ D++   G + V     +V++  +   L+
Sbjct: 47  FAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD-GSNVADWDQAAGLI 105
Query: 93  DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP 152
            T V  FG LD+LVN+   +  R    I +T + + + ++AV+  G F   +HAA     
Sbjct: 106 QTAVETFGGLDVLVNNAGIVRDR---MIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRG 162
Query: 153 -RRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
             + G  +        +   ++G  ++    Y  +K GI  L    AAE+GRYG+ V+ +
Sbjct: 163 LSKAGKAVDGRIINTSSGAGLQG--SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAI 220
Query: 212 SHT 214
           + +
Sbjct: 221 APS 223

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 46  FHKNGAKVVIADVQDNLGQAL-----ADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG 100
           F +  AKVVI +  +N  +AL      ++ G Q +  +  DV+ E +V+NLV T + +FG
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAII-VQGDVTKEEDVVNLVQTAIKEFG 92
Query: 101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCIL 159
            LD+++N   N      V   +    +  +++  N  G FL ++ A +  V    +G ++
Sbjct: 93  TLDVMIN---NAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVI 149
Query: 160 YXXXXXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
                     + +  +   P   +Y  SK G+  + ++LA E    GIRV+ +
Sbjct: 150 N--------MSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNI 194

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 46  FHKNGAKVVIADVQDNLGQAL-----ADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG 100
           F +  AKVVI +  +N  +AL      ++ G Q +  +  DV+ E +V+NLV T + +FG
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAII-VQGDVTKEEDVVNLVQTAIKEFG 92
Query: 101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCIL 159
            LD+++N   N      V   +    +  +++  N  G FL ++ A +  V    +G ++
Sbjct: 93  TLDVMIN---NAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVI 149
Query: 160 YXXXXXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
                     + +  +   P   +Y  SK G+  + ++LA E    GIRV+ +
Sbjct: 150 N--------MSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNI 194

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 24/147 (16%)
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV +E+++   V+  + KFG +DILVN+   +      + LDTP   L+ ++ VNT G +
Sbjct: 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAIS---LTNTLDTPTKRLDLMMNVNTRGTY 165
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNI-PANY-----YGVSKFG----I 190
           L +K            CI Y           I    N+ P  +     Y ++K+G    +
Sbjct: 166 LASK-----------ACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYV 214
Query: 191 LGLVKSLAAELGRYGIRVDCVSHTYGL 217
           LG+ +    E+    +      HT  +
Sbjct: 215 LGMAEEFKGEIAVNALWPKTAIHTAAM 241

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RLQG+V               +L    GAKV  +D+ +  GQ LA +LG + + ++  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSM-FVRHDV 61
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPK-SDLERLLAVNTIGGFL 141
           S+E +   ++     + G L++LVN+   L        ++T +  D  RLL +NT   F+
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVNNAGIL----LPGDMETGRLEDFSRLLKINTESVFI 117

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 76/190 (40%), Gaps = 10/190 (5%)
Query: 23  RLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+                     +GA V+++D+     +A A  +G +    I  D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKK-ARAIAADI 61
Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+   V  L     A  G +DILVN   N     FV+  D       +++ VN  G F+V
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVN---NASIVPFVAWDDVDLDHWRKIIDVNLTGTFIV 118
Query: 143 AKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
                R    + R            + T   G  N  A  Y  +K G++G  ++LA ELG
Sbjct: 119 T----RAGTDQXRAAGKAGRVISIASNTFFAGTPNXAA--YVAAKGGVIGFTRALATELG 172
Query: 203 RYGIRVDCVS 212
           +Y I  + V+
Sbjct: 173 KYNITANAVT 182

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLER 130
           G Q + +   DVS E +V  ++ T +  +G +D++VN   N        ++   KS  + 
Sbjct: 50  GGQAITF-GGDVSKEADVEAMMKTAIDAWGTIDVVVN---NAGITRDTLLIRMKKSQWDE 105
Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLC-NIPANYYGVSKFG 189
           ++ +N  G FL  + A ++M+ +R+G I+            + GL  NI    Y  +K G
Sbjct: 106 VIDLNLTGVFLCTQAATKIMMKKRKGRIIN--------IASVVGLIGNIGQANYAAAKAG 157
Query: 190 ILGLVKSLAAELGRYGIRVDCV 211
           ++G  K+ A E     I V+ V
Sbjct: 158 VIGFSKTAAREGASRNINVNVV 179

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 48  KNGAKVVIAD-VQDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFGKLDIL 105
           ++GA VV++   Q+N+ + +A   G    V    C V    +   LV   V   G +DIL
Sbjct: 36  QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDIL 95
Query: 106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXX 165
           V++     +  F +I+D  +   +++L VN     L+ K     M  R  G +L      
Sbjct: 96  VSNAAVNPF--FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLI----- 148
Query: 166 XXACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
               + +      P    Y VSK  +LGL K+LA EL    IRV+C++
Sbjct: 149 ---VSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLA 193

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 67/163 (41%), Gaps = 19/163 (11%)
Query: 51  AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC 110
           A  V+  +++  GQALA          +  DV+ EREV+   +T  A+ G+L  LVN+  
Sbjct: 63  ADEVVRQIREAGGQALA----------VQADVAKEREVLAXFETVDAQLGRLSALVNNAG 112
Query: 111 NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACT 170
            ++    V  +   +  L+R   +N  G FL A+ A +    R  G           A  
Sbjct: 113 VVDQTTRVDGITLER--LQRXFEINVFGSFLCAREAVKRXSTRYGGSGGSIVNVSSAAAR 170
Query: 171 EIEGLCNIPANY--YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
                   P  Y  Y  +K  I      LA E+   GIRV+ V
Sbjct: 171 -----LGSPGQYVDYAAAKGAIDTFTLGLAKEVATEGIRVNAV 208

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 50  GAKVVI--ADVQDNLGQALAD--KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL 105
           GAKVV+  A+   +  + +++   LG  D   I  D+    E++ L D  VA FG LDI 
Sbjct: 42  GAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIA 100
Query: 106 V-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
           V NSG       F  + D  + + +R+ ++NT G F VA+ A R
Sbjct: 101 VSNSGV----VSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR 140

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 10/104 (9%)
Query: 50  GAKVVI--ADVQDNLGQALAD--KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL 105
           GAKVV+  A+   +  + +++   LG  D   I  D+    E++ L D  VA FG LDI 
Sbjct: 42  GAKVVVNYANSTKDAEKVVSEIKALG-SDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIA 100
Query: 106 V-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
           V NSG       F  + D  + + +R+ ++NT G F VA+ A R
Sbjct: 101 VSNSGV----VSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYR 140

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 54  VIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCN 111
           + A   ++L +      GH + +     DV +   +   VD+ V + G+LDI+V N+G  
Sbjct: 56  IPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG 115
Query: 112 LEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTE 171
               G  ++  T + D   ++ +N  G +   K     M+   RG  +          + 
Sbjct: 116 ---NGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL-------TSS 165
Query: 172 IEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
           + GL   P   +Y  +K G++GL+++   ELG++ IRV+ V  T+
Sbjct: 166 VGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTH 210

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           + F   G+KV+   + D  G+A  D        +I CDV+N  +V   +D    ++G + 
Sbjct: 33  ERFVDEGSKVIDLSIHDP-GEAKYD--------HIECDVTNPDQVKASIDHIFKEYGSIS 83
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           +LVN   N     +  I      +  R++ VN  G +  +K A   M+  R   I+    
Sbjct: 84  VLVN---NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISS 140
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
                 T+        A+ Y  SK  ++GL KS+A
Sbjct: 141 VQASIITK-------NASAYVTSKHAVIGLTKSIA 168

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 68/136 (50%), Gaps = 12/136 (8%)
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           +V++   V  LV++T+ +FG L++LVN+    + +  + + D    + + ++  N    F
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKD---DEWDAVIDTNLKAVF 141
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVKSLAA 199
            +++   R M+  R G I+          T + G    P    Y  +K G+ G+ ++LA 
Sbjct: 142 RLSRAVLRPMMKARGGRIVN--------ITSVVGSAGNPGQVNYAAAKAGVAGMTRALAR 193
Query: 200 ELGRYGIRVDCVSHTY 215
           E+G  GI V+CV+  +
Sbjct: 194 EIGSRGITVNCVAPGF 209

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 66/155 (42%), Gaps = 19/155 (12%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           + F   G+KV+   + D  G+A  D        +I CDV+N  +V   +D    ++G + 
Sbjct: 26  ERFVDEGSKVIDLSIHDP-GEAKYD--------HIECDVTNPDQVKASIDHIFKEYGSIS 76
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           +LVN   N     +  I      +  R++ VN  G +  +K A   M+  R   I+    
Sbjct: 77  VLVN---NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISS 133
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
                 T+        A+ Y  SK  ++GL KS+A
Sbjct: 134 VQASIITK-------NASAYVTSKHAVIGLTKSIA 161

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 19  SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
           S +  L+G+V               +L  + GAKV+     ++  QA++D LG       
Sbjct: 2   SQFXNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGX- 60
Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGC----NLEYRGFVSILDTPKSDLERLLAV 134
             +V+N   +  ++     +FG +DILVN+      NL  R         + +   +   
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNLLXR-------XKEEEWSDIXET 113
Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLV 194
           N    F ++K   R    +R+G I+            +    N     Y  +K G++G  
Sbjct: 114 NLTSIFRLSKAVLRGXXKKRQGRIINVGSV-------VGTXGNAGQANYAAAKAGVIGFT 166
Query: 195 KSLAAELGRYGIRVDCVSHTY 215
           KS A E+   G+ V+ V+  +
Sbjct: 167 KSXAREVASRGVTVNTVAPGF 187

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 14/197 (7%)
Query: 22  YRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNL---GQALADKLGHQDVCYI 78
           + L+G++                 + K GA +V  D+   L   G A     G     Y+
Sbjct: 30  FSLKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYV 89
Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV++E  +  +V    ++ G +DILVN+   +     V +++   +   +++ ++   
Sbjct: 90  -CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRR---VPMIEMTAAQFRQVIDIDLNA 145
Query: 139 GFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            F+V+K     M+ +  G I+         C+ +  L     + Y  +K G+  L K++A
Sbjct: 146 PFIVSKAVIPSMIKKGHGKIINI-------CSMMSELGRETVSAYAAAKGGLKMLTKNIA 198
Query: 199 AELGRYGIRVDCVSHTY 215
           +E G   I+ + +   Y
Sbjct: 199 SEYGEANIQCNGIGPGY 215

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 90  NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF-LVAKHAAR 148
            +VD  VA  G+LDI+V +      + +  I  TP+ D   ++ +N  G +  V   A R
Sbjct: 90  KVVDDGVAALGRLDIIVANAGVAAPQAWDDI--TPE-DFRDVMDINVTGTWNTVMAGAPR 146
Query: 149 VMVPRRRGCILYXXXXXXXACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIR 207
           ++   R G I+          +   G+   P   +Y  SK  + GL ++ AAELG++ IR
Sbjct: 147 IIEGGRGGSIIL--------ISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIR 198
Query: 208 VDCV 211
           V+ V
Sbjct: 199 VNSV 202

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 22/148 (14%)
Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC----NLEYRGFVSILDTPKSDLE 129
           D   I  +V++  EV   +   V++FG LD+LVN+      NL  R         + + +
Sbjct: 55  DSFAIQANVADADEVKAXIKEVVSQFGSLDVLVNNAGITRDNLLXR-------XKEQEWD 107
Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP--ANYYGVSK 187
            ++  N  G F   + A    + +R G I+          + + G    P  ANY   +K
Sbjct: 108 DVIDTNLKGVFNCIQKATPQXLRQRSGAIIN--------LSSVVGAVGNPGQANYV-ATK 158
Query: 188 FGILGLVKSLAAELGRYGIRVDCVSHTY 215
            G++GL KS A EL   GI V+ V+  +
Sbjct: 159 AGVIGLTKSAARELASRGITVNAVAPGF 186

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 14/149 (9%)
Query: 64  QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDT 123
            A ADK     V  +  DV++E +V   +  T+ +FG +D+LVN+           +  T
Sbjct: 48  HAYADK-----VLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTT 102
Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPA-NY 182
           P    ++++AVN  G FL      R ++P     +L            +  L   P  + 
Sbjct: 103 PVEQFDKVMAVNVRGIFL----GCRAVLPH----MLLQGAGVIVNIASVASLVAFPGRSA 154
Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           Y  SK  +L L KS+A +    GIR + V
Sbjct: 155 YTTSKGAVLQLTKSVAVDYAGSGIRCNAV 183

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+   L       + D    D   ++  N  G 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLD---VVETNLTGV 134
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 187
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 188 GLELARTGITVNAV 201

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+   L       + D    D   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLD---VVETNLTGV 138
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 191
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 192 GLELARTGITVNAV 205

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 10/195 (5%)
Query: 24  LQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L+G+V               + F K GAKVVI D      + +A ++G   +  +  D+S
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALA-VAADIS 65
Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
            E +V   V+  ++KFGK+DILVN+   + ++   + L  P+ + +R++ VN  G +L+ 
Sbjct: 66  KEADVDAAVEAALSKFGKVDILVNN-AGIGHKPQNAELVEPE-EFDRIVGVNVRGVYLMT 123
Query: 144 KHAARVMVP--RRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
                 ++P  +  G           A T   G       +Y  +K  ++ + K+LA EL
Sbjct: 124 SK----LIPHFKENGAKGQECVILNVASTG-AGRPRPNLAWYNATKGWVVSVTKALAIEL 178
Query: 202 GRYGIRVDCVSHTYG 216
               IRV  ++   G
Sbjct: 179 APAKIRVVALNPVAG 193

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 22/147 (14%)
Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLA 133
           +     DV +   + + VD+ V + G+LDI+V N+G   + R    I D    D+   + 
Sbjct: 78  IVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNVWQDM---ID 134
Query: 134 VNTIGGFLVAKHAARVMVPR-----RRGCILYXXXXXXXACTEIEGLCNIP-ANYYGVSK 187
           +N  G +    H  +  VP      R G I+          + + G    P   +Y  +K
Sbjct: 135 INLTGVW----HTVKAGVPHVLSGGRGGSIVL--------TSSVGGRKAYPNTGHYIAAK 182
Query: 188 FGILGLVKSLAAELGRYGIRVDCVSHT 214
            G++GL+++ A ELG + IRV+ V  T
Sbjct: 183 HGVIGLMRAFAVELGPHMIRVNAVLPT 209

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 80/175 (45%), Gaps = 15/175 (8%)
Query: 45  LFHKNGAKVVIAD-----VQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF 99
           LF + GAKV I       +++   Q LA  +  Q+V  +  DV+ +     ++ TT+ KF
Sbjct: 25  LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL 159
           GKLDILVN+          +I D+ +S      ++ +    L     + + + ++    L
Sbjct: 85  GKLDILVNNAG-------AAIPDS-QSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHL 136
Query: 160 YXXXXXXXACTEI-EGLCNIPA-NYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                     + I  GL   P   YY ++K  I    ++ A +L ++GIRV+ +S
Sbjct: 137 SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSIS 191

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 84/209 (40%), Gaps = 22/209 (10%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNL-----GQALADKLGH 72
           + S  R  GRV                 F + GA VV+ D+  +      G   ADK+  
Sbjct: 22  MGSPLRFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVE 81
Query: 73  Q-----DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD 127
           +          + D   E E   +V T +  FG++D++VN+   L  R F  I D    D
Sbjct: 82  EIRRRGGKAVANYDSVEEGE--KVVKTALDAFGRIDVVVNNAGILRDRSFARISD---ED 136
Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSK 187
            + +  V+  G F V + A   M  ++ G I+        + + I G  N     Y  +K
Sbjct: 137 WDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIM-----TSSASGIYG--NFGQANYSAAK 189
Query: 188 FGILGLVKSLAAELGRYGIRVDCVSHTYG 216
            G+LGL  SLA E  +  I  + ++   G
Sbjct: 190 LGLLGLANSLAIEGRKSNIHCNTIAPNAG 218

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 58/140 (41%), Gaps = 20/140 (14%)
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           + CD+  E +V   V  TV  FG +DILVN+   +  RG    LDTP    +    VN  
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRG---TLDTPXKRFDLXQQVNAR 123
Query: 138 GGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYG------VSKFGIL 191
           G F+ A+            C+ +           +    ++   ++G      ++K G  
Sbjct: 124 GSFVCAQ-----------ACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKXGXS 172
Query: 192 GLVKSLAAELGRYGIRVDCV 211
            +   LAAE G  G+ ++ +
Sbjct: 173 LVTLGLAAEFGPQGVAINAL 192

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 44.7 bits (104), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 23/144 (15%)
Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
           + Y   D++NE E    VD   A  G+L  +V+     E  G ++ +D+      R + +
Sbjct: 65  IRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEA--WRRTVDL 122
Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPAN-------YYGVSK 187
           N  G   V KHAAR MV    G  +              G+ +I A+        YGV+K
Sbjct: 123 NVNGTMYVLKHAAREMVRGGGGSFV--------------GISSIAASNTHRWFGAYGVTK 168
Query: 188 FGILGLVKSLAAELGRYGIRVDCV 211
             +  L++  A ELG   +RV+ +
Sbjct: 169 SAVDHLMQLAADELGASWVRVNSI 192

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 46  FHKNGAKVVIADV-QDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           F + GA++V++DV Q  L QA+    G   D   + CDV +  E++ L D      G +D
Sbjct: 51  FARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           + V S   +   G ++ ++    D   ++ ++  G      HA    +PR    +L    
Sbjct: 111 V-VFSNAGIVVAGPLAQMN--HDDWRWVIDIDLWGSI----HAVEAFLPR----LLEQGT 159
Query: 164 XXXXACT-EIEGLC-NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
               A T    GL  N     YGV+K+G++GL ++LA E+   GI V  +
Sbjct: 160 GGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVL 209

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 13/135 (9%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPK-SDLERLLAVNTIG 138
           CD+S+   +       +A  G+ D+LVN   N     F   L T K ++ + L+AVN   
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVN---NAGVGWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 139 GFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP-ANYYGVSKFGILGLVKSL 197
            +L+ +  A  M+  +RG I+          + + G   +     Y  SK+G+ GL+ S 
Sbjct: 142 PYLLLRAFAPAMIAAKRGHIIN--------ISSLAGKNPVADGAAYTASKWGLNGLMTSA 193
Query: 198 AAELGRYGIRVDCVS 212
           A EL ++ +RV  V+
Sbjct: 194 AEELRQHQVRVSLVA 208

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 50  GAKVVIADVQDNLG----QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL 105
           GAKV + D     G     AL ++   Q   +I CDV++++++ +     V  FG+LDIL
Sbjct: 31  GAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDIL 90
Query: 106 V-NSGCNLEYRGFVSILDTPKSDLERLLAVNTI----GGFLVAKHAARVMVPRRRGCILY 160
           V N+G N E             + E+ L +N +    G +L   + ++       G I+ 
Sbjct: 91  VNNAGVNNE------------KNWEKTLQINLVSVISGTYLGLDYMSK-QNGGEGGIII- 136
Query: 161 XXXXXXXACTEIEGLCNIPAN-YYGVSKFGILGLVKS--LAAELGRYGIRVDCV 211
                    + + GL  +     Y  SK GI+G  +S  LAA L   G+R++ +
Sbjct: 137 -------NMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAI 183

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 66  LADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDT 123
           L D+L  Q   V     D+SNE EV  L D    +FGK+DI +N+   +  +    I++T
Sbjct: 54  LKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKK---PIVET 110
Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVP 152
            +++ + +  +N    +   K AA+ M P
Sbjct: 111 SEAEFDAMDTINNKVAYFFIKQAAKHMNP 139

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 43.9 bits (102), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 138
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +GL +  A  Y  SK G++G  K+L
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGLVH--AAPYSASKHGVVGFTKAL 191
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 192 GLELARTGITVNAV 205

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 15/148 (10%)
Query: 64  QALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL 121
           +AL D+L      V  +  DV++ + V   V +TV   G LDILVN+   +   G V   
Sbjct: 45  RALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNN-AGIMLLGPVEDA 103
Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP-A 180
           DT  +D  R++  N + G +    AA   + R +G ++          + I G  N+  A
Sbjct: 104 DT--TDWTRMIDTNLL-GLMYMTRAALPHLLRSKGTVVQ--------MSSIAGRVNVRNA 152
Query: 181 NYYGVSKFGILGLVKSLAAELGRYGIRV 208
             Y  +KFG+    ++L  E+   G+RV
Sbjct: 153 AVYQATKFGVNAFSETLRQEVTERGVRV 180

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 12/136 (8%)
Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DVS + E+  +++  + +   +DILVN+        F   L     + E +L  N    F
Sbjct: 101 DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLF---LRMKNDEWEDVLRTNLNSLF 157
Query: 141 LVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLC-NIPANYYGVSKFGILGLVKSLAA 199
            + +  ++ M+  R G I+          + I GL  N+    Y  SK G++G  KSLA 
Sbjct: 158 YITQPISKRMINNRYGRII--------NISSIVGLTGNVGQANYSSSKAGVIGFTKSLAK 209
Query: 200 ELGRYGIRVDCVSHTY 215
           EL    I V+ ++  +
Sbjct: 210 ELASRNITVNAIAPGF 225

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 13/174 (7%)
Query: 44  QLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           + F  +GA++++ D +       A +LG      I  DV++   +        A    + 
Sbjct: 29  RAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVA-PVS 87
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ILVNS            L+T  +   +++AVN  G F  ++   R MV R  G I+    
Sbjct: 88  ILVNSAGIARLH---DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGS 144
Query: 164 XXXXACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY 215
                      + N P  A+ Y  SK  +  L ++LAAE    G+RV+ ++  Y
Sbjct: 145 MSGT-------IVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGY 191

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 16/144 (11%)
Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
           V +   D +   E+ +       +FG  DILVN   N   +    I D P    +R++AV
Sbjct: 78  VLHHPADXTKPSEIADXXAXVADRFGGADILVN---NAGVQFVEKIEDFPVEQWDRIIAV 134
Query: 135 NTIGGFLVAKHAARVMVP--RRRGCILYXXXXXXXACTEIEGLCNIP-ANYYGVSKFGIL 191
           N    F    H  R  +P  +++G                 GL   P  + Y  +K GI 
Sbjct: 135 NLSSSF----HTIRGAIPPXKKKGW------GRIINIASAHGLVASPFKSAYVAAKHGIX 184
Query: 192 GLVKSLAAELGRYGIRVDCVSHTY 215
           GL K++A E+   G+ V+ +   Y
Sbjct: 185 GLTKTVALEVAESGVTVNSICPGY 208

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 49  NGAKVVIADV-QDNLGQALAD---KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI 104
            G KV IAD+ QD++ +ALA    +    +V  +  DV++        D   A+FG + I
Sbjct: 31  QGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSI 90
Query: 105 LV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG-----GFLVAKHAARVMVPRRRGCI 158
           L  N+G NL    F  I ++   D + LL VN  G        V +   RV    ++G  
Sbjct: 91  LCNNAGVNL----FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGG- 145
Query: 159 LYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRV 208
            +       A     G   I    Y  +KF + GL +SL   L +Y I V
Sbjct: 146 -HVVNTASMAAFLAAGSPGI----YNTTKFAVRGLSESLHYSLLKYEIGV 190

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 134
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 135 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 187
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 188 GLELARTGITVNAV 201

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 138
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 191
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 192 GLELARTGITVNAV 205

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 138
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 191
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 192 GLELARTGITVNAV 205

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 82  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 138
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 139 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 191
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 192 GLELARTGITVNAV 205

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +  E+  LV   V ++G +D+LVN+           + D    D   ++  N  G 
Sbjct: 62  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLD---VVETNLTGV 118
Query: 140 FLVAKHAARV--MVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           F V K   +   M+ R  G I+             +G+ +  A  Y  SK G++G  K+L
Sbjct: 119 FRVTKQVLKAGGMLERGTGRIVNIASTGGK-----QGVVH--AAPYSASKHGVVGFTKAL 171
Query: 198 AAELGRYGIRVDCV 211
             EL R GI V+ V
Sbjct: 172 GLELARTGITVNAV 185

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 45  LFHKNGAKVVIA--------DVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTV 96
           +F + GA V +A         V   LG+     LG  +V  +  DVS+     +   T V
Sbjct: 60  VFARAGANVAVAARSPRELSSVTAELGE-----LGAGNVIGVRLDVSDPGSCADAARTVV 114
Query: 97  AKFGKLDIL-VNSGCNLEYRGFVSILDTPKSD-LERLLAVNTIGGFLVAKHAARVMVPRR 154
             FG LD++  N+G   E R     LDT   + L  +L VN  G     +     +    
Sbjct: 115 DAFGALDVVCANAGIFPEAR-----LDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG 169
Query: 155 RGCILYXXXXXXXACTEIEG-LCNIPA-NYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           RG ++          + I G +   P  ++YG SK   LG +++ A EL   G+ V+ +
Sbjct: 170 RGRVIL--------TSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAI 220

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 77/175 (44%), Gaps = 23/175 (13%)
Query: 46  FHKNGAKVVIADVQ-DNLGQA---LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK 101
           F K GA +V+   Q D L +A   L +K G + V  +  DV+    V  +V++  + FG 
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-VLEVAVDVATPEGVDAVVESVRSSFGG 85
Query: 102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR----GC 157
            DILVN+         +   D        LL        + A   AR +VP  R    G 
Sbjct: 86  ADILVNNAGTGSNETIMEAADEKWQFYWELL-------VMAAVRLARGLVPGMRARGGGA 138
Query: 158 ILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           I++       +   ++ L   P   Y V+K  ++   K+LA E+ +  IRV+C++
Sbjct: 139 IIHNA-----SICAVQPLWYEP--IYNVTKAALMMFSKTLATEVIKDNIRVNCIN 186

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 46  FHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL--- 102
            H +G  VVIAD+    G+ALAD+LG++   ++  +V++E  V+  ++    + G+L   
Sbjct: 50  LHADGLGVVIADLAAEKGKALADELGNR-AEFVSTNVTSEDSVLAAIE-AANQLGRLRYA 107
Query: 103 -----------DILVNSGCNLEYRGFVSILD---TPKSDLERLLAVNTIGGFLVAKHAAR 148
                       I+   G   +  GF   +D       ++ RL+A +          AA 
Sbjct: 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASI--------AAAE 159
Query: 149 VMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRV 208
                 RG ++        +    EG   I    Y  +K G++GL  + A +L   GIRV
Sbjct: 160 PRENGERGALVL-----TASIAGYEG--QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRV 212
Query: 209 DCVS 212
           + ++
Sbjct: 213 NTIA 216

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 46  FHKNGAKVVIADVQ-DNLGQA---LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK 101
           F K GA +V+   Q D L +A   L +K G + V  +  DV+    V  +V++  + FG 
Sbjct: 27  FAKEGAHIVLVARQVDRLHEAARSLKEKFGVR-VLEVAVDVATPEGVDAVVESVRSSFGG 85
Query: 102 LDILVN---SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCI 158
            DILVN   +G N       +I++      +    ++ +    +A+     M  R  G I
Sbjct: 86  ADILVNNAGTGSN------ETIMEAADEKWQFYWELHVMAAVRLARGLVPGMRARGGGAI 139
Query: 159 LYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
           ++       +   ++ L   P   Y V+K  ++   K+LA E+ +  IRV+C++
Sbjct: 140 IHNA-----SICAVQPLWYEP--IYNVTKAALMMFSKTLATEVIKDNIRVNCIN 186

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 49  NGAKVVIADVQDNLGQAL--ADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV 106
           +G K+ ++   D+L + +   + LG + +     DV +   +   VD  V + G+LDI++
Sbjct: 65  DGVKLPMS-TPDDLAETVRQVEALGRR-IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVL 122
Query: 107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA-ARVMVPRRRGCILYXXXXX 165
            +         ++ +D PK+    ++ VN  G ++ A+ A   +M  +R G I++     
Sbjct: 123 ANAALASEGTRLNRMD-PKT-WRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTS--- 177
Query: 166 XXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
             +   + G  NI  NY   SK G+ GL++++A ELG   IRV+ V
Sbjct: 178 --SIGGLRGAENI-GNYI-ASKHGLHGLMRTMALELGPRNIRVNIV 219

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 51  AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGC 110
           A+ V+++++   G+A+A          I  D  +   +   +  TV   G LDILVNS  
Sbjct: 69  AQAVVSEIEQAGGRAVA----------IRADNRDAEAIEQAIRETVEALGGLDILVNSAG 118
Query: 111 NLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACT 170
                    + +T  +D + + AVN    F+  + A+R +    R   +          +
Sbjct: 119 IWHS---APLEETTVADFDEVXAVNFRAPFVAIRSASRHLGDGGRIITI---------GS 166
Query: 171 EIEGLCNIPA-NYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
            +  L   P  + Y  SK  + GL K LA +LG  GI V+ V
Sbjct: 167 NLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIV 208

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
           + CD+++  +V           G +++L+ N+G   +      ++   + D   ++  N 
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL----LMRMSEEDFTSVVETNL 119
Query: 137 IGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY-YGVSKFGILGLVK 195
            G F V K A R M+  ++G ++          + + GL        Y  SK G++G  +
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVL--------ISSVVGLLGSAGQANYAASKAGLVGFAR 171
Query: 196 SLAAELGRYGIRVDCVSHTY 215
           SLA ELG   I  + V+  +
Sbjct: 172 SLARELGSRNITFNVVAPGF 191

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 6/105 (5%)
Query: 14  ILPTLSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIAD-----VQDNLGQALAD 68
           ++P  S   R  G+                 +F K GA+V I       +++   Q L  
Sbjct: 14  LVPRGSHMARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA 73
Query: 69  KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNL 112
            +  + +  +  DV+      ++++TT+AKFGK+DILV N+G NL
Sbjct: 74  GVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANL 118

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 41.6 bits (96), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 64  QALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL 121
           +AL D+L      V  +  DV++ + V   V +TV   G LDILVN+   +   G V   
Sbjct: 45  RALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNN-AGIXLLGPVEDA 103
Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIP-A 180
           DT  +D  R +  N + G      AA   + R +G ++          + I G  N+  A
Sbjct: 104 DT--TDWTRXIDTNLL-GLXYXTRAALPHLLRSKGTVVQ--------XSSIAGRVNVRNA 152
Query: 181 NYYGVSKFGILGLVKSLAAELGRYGIRV 208
             Y  +KFG+    ++L  E+   G+RV
Sbjct: 153 AVYQATKFGVNAFSETLRQEVTERGVRV 180

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 41.2 bits (95), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 74/196 (37%), Gaps = 14/196 (7%)
Query: 18  LSSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           ++  + L GR                +   K GA V IAD+     QA+   L +     
Sbjct: 4   MAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFA- 62
Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDIL-VNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DV+    V   +   +   G  D+L  N+G +   R  V I D    + +    VN 
Sbjct: 63  VEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITD---EEWDFNFDVNA 118
Query: 137 IGGFLVAKHAAR-VMVPRRRGCILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVK 195
            G FL  + A R  +    +G I+            +         +Y  SKF + G  +
Sbjct: 119 RGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLA-------HYSASKFAVFGWTQ 171
Query: 196 SLAAELGRYGIRVDCV 211
           +LA E+    IRV+CV
Sbjct: 172 ALAREMAPKNIRVNCV 187

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 15/166 (9%)
Query: 48  KNGAKVVIADVQDNLGQALADKL----GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD 103
           K+G  V IAD  D   +A+A ++    GH     +  DVS+  +V   V+      G  D
Sbjct: 24  KDGFAVAIADYNDATAKAVASEINQAGGH--AVAVKVDVSDRDQVFAAVEQARKTLGGFD 81
Query: 104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXX 163
           ++VN+          SI  TP+  ++++  +N  G     + A         G  +    
Sbjct: 82  VIVNNAGVAPSTPIESI--TPEI-VDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIIN-- 136
Query: 164 XXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVD 209
               AC++   + N     Y  SKF + GL ++ A +L   GI V+
Sbjct: 137 ----ACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Query: 19  SSYYRLQGRVXXXXXXXXXXXXXXXQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
           S   RL+G+                + + + GA V IAD+     +  A ++G      +
Sbjct: 1   SXXKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYA-V 59
Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV+ +  +   +  TV   G LDILVN+    +      I++  +   E+L A+N  G
Sbjct: 60  QXDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD---LAPIVEITRESYEKLFAINVAG 116

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 48  KNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN 107
           + GA V+  D++   G+  A +LG   V + + DV+NE +    +     +FG +  LVN
Sbjct: 29  QEGATVLGLDLKPPAGEEPAAELGAA-VRFRNADVTNEADATAALAFAKQEFGHVHGLVN 87
Query: 108 -----SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM------VPRRRG 156
                 G  +  R     LD+      R +AVN IG F   + AA V           RG
Sbjct: 88  CAGTAPGEKILGRSGPHALDS----FARTVAVNLIGTFNXIRLAAEVXSQGEPDADGERG 143
Query: 157 CILYXXXXXXXACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
            I+        +    +G   I    Y  SK G+  L    A EL R+GIRV  ++
Sbjct: 144 VIV-----NTASIAAFDG--QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIA 192

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 16/152 (10%)
Query: 64  QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILD 122
           + LA++LG       HCDV++   +  + +T   K+GKLD LV++ G + +       +D
Sbjct: 74  EPLAEELGA--FVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYID 131
Query: 123 TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYXXXXXXXACTEIEGLCNIPANY 182
           T +++    + ++      V++ A ++M     G IL              G   +  NY
Sbjct: 132 TSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSIL---------TLTYYGAEKVMPNY 180
Query: 183 --YGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
              GV+K  +   VK LA +LG   IRV+ +S
Sbjct: 181 NVMGVAKAALEASVKYLAVDLGPQNIRVNAIS 212

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-76
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	3e-61
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	9e-61
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-59
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-58
4dqx_A	277	Probable oxidoreductase protein; structural genomi	4e-58
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-57
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	2e-55
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	9e-55
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	1e-54
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	3e-54
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-54
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	4e-54
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	3e-53
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	2e-52
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	7e-52
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-51
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-51
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	3e-51
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	5e-51
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	5e-51
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-51
1spx_A	278	Short-chain reductase family member (5L265); paral	3e-50
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	5e-50
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	6e-50
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	8e-50
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	1e-49
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-49
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-49
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-48
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	8e-48
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	2e-47
1xkq_A	280	Short-chain reductase family member (5D234); parra	2e-47
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	2e-47
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	4e-47
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	5e-47
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	1e-46
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-46
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	3e-46
4e4y_A	244	Short chain dehydrogenase family protein; structur	3e-46
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-46
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	5e-46
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-46
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	6e-46
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-45
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	4e-45
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-45
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-45
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	8e-45
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	1e-44
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-44
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	2e-44
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	3e-44
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-44
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	4e-44
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	1e-43
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	2e-43
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-43
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-43
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	5e-43
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	6e-43
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	1e-42
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	2e-42
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	2e-42
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	3e-42
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	5e-42
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-42
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	8e-42
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	1e-41
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-41
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	1e-41
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	1e-41
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	1e-41
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	2e-41
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	3e-41
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	3e-41
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	4e-41
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	8e-41
3imf_A	257	Short chain dehydrogenase; structural genomics, in	8e-41
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	1e-40
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	1e-40
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-40
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	2e-40
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	2e-40
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-40
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-40
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-40
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-40
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-40
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	9e-40
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	1e-39
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	1e-39
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	3e-39
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-39
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	4e-39
1xq1_A	266	Putative tropinone reducatse; structural genomics,	4e-39
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	7e-39
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	7e-39
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	7e-39
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	9e-39
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	9e-39
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	1e-38
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	3e-38
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	3e-38
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	3e-38
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	5e-38
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	9e-38
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-37
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	5e-37
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-37
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	7e-37
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-37
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	9e-37
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	1e-36
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-36
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-36
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	8e-36
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-36
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-35
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-35
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-35
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-35
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	4e-35
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	5e-35
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	6e-35
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-34
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-34
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-34
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	4e-34
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	6e-34
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	8e-34
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	9e-34
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-33
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-33
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	2e-33
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	6e-33
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	9e-33
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	1e-32
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	2e-32
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-32
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-28
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	3e-32
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-32
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	4e-32
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	5e-32
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	6e-32
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	8e-32
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	9e-32
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	1e-31
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	6e-31
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	8e-31
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	1e-30
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	1e-30
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-30
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-30
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	4e-30
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	8e-30
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	2e-29
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-29
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	4e-29
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	6e-29
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	6e-29
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-28
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	4e-28
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-27
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	8e-26
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	4e-25
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	5e-25
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	6e-25
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-24
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	1e-24
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	2e-24
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	3e-24
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	3e-24
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	4e-24
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	5e-24
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	6e-24
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	8e-24
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	1e-23
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	5e-20
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	3e-19
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	9e-17
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-15
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	3e-15
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	6e-15
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	2e-14
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	6e-14
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	8e-14
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-13
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-13
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	2e-13
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	2e-13
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	3e-13
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	4e-13
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	5e-12
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	1e-10
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	3e-09
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	6e-07
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-05
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	6e-05
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	2e-04
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	3e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  232 bits (594), Expect = 1e-76
 Identities = 103/263 (39%), Positives = 147/263 (55%), Gaps = 44/263 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
           RLQ +VAIITGGA GIG + A+LF + GAKVVIAD+ D+ GQ + + +G  D + ++HCD
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 72

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNTIGG 139
           V+ + +V NLVDTT+AK GKLDI+     N  +      SIL+    D +R++ +N  G 
Sbjct: 73  VTKDEDVRNLVDTTIAKHGKLDIMFG---NVGVLSTTPYSILEAGNEDFKRVMDINVYGA 129

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
           FLVAKHAARVM+P ++G I++T          I         ++ Y  +K  +LGL  SL
Sbjct: 130 FLVAKHAARVMIPAKKGSIVFTAS--------ISSFTAGEGVSHVYTATKHAVLGLTTSL 181

Query: 198 AAELGRYGIRVDCVS------------HTYGLAMAEAIAS--------------IANAAL 231
             ELG YGIRV+CVS                 +  E +A               +A+A  
Sbjct: 182 CTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVA 241

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +A  D++ YV   NL+++GG+
Sbjct: 242 Y-LA-GDESKYVSGLNLVIDGGY 262

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  212 bits (542), Expect = 6e-69
 Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 37/252 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+VA+++GGA G+GAS  +     GAKVV  D+ D  G+A+A +L      Y+H DV
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYVHLDV 62

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   +    VDT V  FG L +LVN   N       +I D   ++ +R+L VN  G FL 
Sbjct: 63  TQPAQWKAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLG 119

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
            +   + M    RG I+          + IEGL    A + Y  +KF + GL KS A EL
Sbjct: 120 IRAVVKPMKEAGRGSIINI--------SSIEGLAGTVACHGYTATKFAVRGLTKSTALEL 171

Query: 202 GRYGIRVDCVS----HTYGLAMAEAIAS---------------IANAALYNMAKDDDTSY 242
           G  GIRV+ +      T    M + +                 ++N  +Y +A  D++SY
Sbjct: 172 GPSGIRVNSIHPGLVKT---PMTDWVPEDIFQTALGRAAEPVEVSNLVVY-LAS-DESSY 226

Query: 243 VGKQNLLVNGGF 254
                 +V+GG 
Sbjct: 227 STGAEFVVDGGT 238

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  193 bits (492), Expect = 3e-61
 Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 43/268 (16%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV 75
           P   ++  L G+VAI+TG  +GIG + A+     G  V+ AD+  +   A A K+G    
Sbjct: 19  PGSMNHPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCG-A 77

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
                DVS+E+++I +VD  VA FG +D LV    N       S++DT   D +R++A+N
Sbjct: 78  AACRVDVSDEQQIIAMVDACVAAFGGVDKLVA---NAGVVHLASLIDTTVEDFDRVIAIN 134

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLV 194
             G +L  KHAA  M+ R  G I+          + + G   +     YG+SK GI+ L 
Sbjct: 135 LRGAWLCTKHAAPRMIERGGGAIVNL--------SSLAGQVAVGGTGAYGMSKAGIIQLS 186

Query: 195 KSLAAELGRYGIRVDCVS-------------HTYGLAMAEAIAS---------------I 226
           +  AAEL   GIR + +                +  A+    A                +
Sbjct: 187 RITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEM 246

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           A   ++ +   DD S +     + +GG 
Sbjct: 247 AGIVVF-LL-SDDASMITGTTQIADGGT 272

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  191 bits (487), Expect = 9e-61
 Identities = 77/255 (30%), Positives = 108/255 (42%), Gaps = 37/255 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L G+  IITGGA G+GA AA+     GA+VV+ADV D  G A A +LG     Y H DV
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDA-ARYQHLDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + E +   +V     +FG +D LVN   N      + +         +++ +N  G F+ 
Sbjct: 61  TIEEDWQRVVAYAREEFGSVDGLVN---NAGISTGMFLETESVERFRKVVEINLTGVFIG 117

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
            K     M     G I+          +   GL  +     YG SK+G+ GL K  A EL
Sbjct: 118 MKTVIPAMKDAGGGSIVNI--------SSAAGLMGLALTSSYGASKWGVRGLSKLAAVEL 169

Query: 202 GRYGIRVDCV---------SHTYGLAMAEAIAS-------------IANAALYNMAKDDD 239
           G   IRV+ V         +   G+   E                 IA A +  +   D 
Sbjct: 170 GTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK-LLS-DT 227

Query: 240 TSYVGKQNLLVNGGF 254
           +SYV    L V+GG+
Sbjct: 228 SSYVTGAELAVDGGW 242

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  186 bits (476), Expect = 6e-59
 Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 39/257 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+ +VAIITG   GIG   +++  + GA+VV+AD+ +      A  +G     +   D+
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRG-AVHHVVDL 66

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           +NE  V  L+D T+  FG+LDI+ N   N        + +        +    VN  G  
Sbjct: 67  TNEVSVRALIDFTIDTFGRLDIVDN---NAAHSDPADMLVTQMTVDVWDDTFTVNARGTM 123

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAA 199
           L+ K+A   ++    G I+          +          +  Y  +K  I  L + +A 
Sbjct: 124 LMCKYAIPRLISAGGGAIVNI--------SSATAHAAYDMSTAYACTKAAIETLTRYVAT 175

Query: 200 ELGRYGIRVDCV----------SHTYGLAMAEAIAS------------IANAALYNMAKD 237
           + GR+G+R + +                 + +  A+            IA    + +A  
Sbjct: 176 QYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCF-LAS- 233

Query: 238 DDTSYVGKQNLLVNGGF 254
           D  +++  Q +  + G 
Sbjct: 234 DRAAFITGQVIAADSGL 250

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  185 bits (471), Expect = 3e-58
 Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 54/265 (20%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           R  G+V ++TGG  GIGA   + F  +GA+VVI D  ++ G+AL  +L      +I CDV
Sbjct: 6   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDV 63

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           + E +V  LV  T+ +FG+LD +VN   N            +T      +LL +N +G +
Sbjct: 64  TQEDDVKTLVSETIRRFGRLDCVVN---NAGHHPPP-QRPEETSAQGFRQLLELNLLGTY 119

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAA 199
            + K A   +  + +G ++  +         + G      A  Y  +K  +  + K+LA 
Sbjct: 120 TLTKLALPYLR-KSQGNVINISS--------LVGAIGQAQAVPYVATKGAVTAMTKALAL 170

Query: 200 ELGRYGIRVDCVS----HTYGLAMAEAIAS--------------------------IANA 229
           +   YG+RV+C+S     T    + E +A+                          +  A
Sbjct: 171 DESPYGVRVNCISPGNIWT---PLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAA 227

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGGF 254
           A++ +A   + ++     LLV GG 
Sbjct: 228 AVF-LA--SEANFCTGIELLVTGGA 249

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  185 bits (472), Expect = 4e-58
 Identities = 75/264 (28%), Positives = 123/264 (46%), Gaps = 48/264 (18%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
             L  RV I+TGG SGIG + A+LF KNGA VV+ADV ++    +A+++G +    +  D
Sbjct: 23  MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSK-AFGVRVD 81

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           VS+ ++  ++V+ T AK+G++D+LVN   N  +    +++  P+   +R+++VN  G FL
Sbjct: 82  VSSAKDAESMVEKTTAKWGRVDVLVN---NAGFGTTGNVVTIPEETWDRIMSVNVKGIFL 138

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAE 200
            +K+   VM     G I+ TT               I     Y  SK  I  L +++A +
Sbjct: 139 CSKYVIPVMRRNGGGSIINTTS--------YTATSAIADRTAYVASKGAISSLTRAMAMD 190

Query: 201 LGRYGIRVDCVS----HTYGLAMAEAIAS--------------------------IANAA 230
             + GIRV+ V+     +        I +                          IA A 
Sbjct: 191 HAKEGIRVNAVAPGTIDS---PYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAM 247

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           L+ +A  D + +     L V+GG 
Sbjct: 248 LF-LA-SDRSRFATGSILTVDGGS 269

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  183 bits (467), Expect = 1e-57
 Identities = 65/264 (24%), Positives = 103/264 (39%), Gaps = 50/264 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RLQG+VA++TGGASG+G    +L    GAKV  +D+ +  GQ LA +LG     ++  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE-RSMFVRHDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+E +   ++     + G L++LVN   N        +      D  RLL +NT   F+ 
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVN---NAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
            +     M     G I+            +     I     Y  SK  +  L ++ A   
Sbjct: 119 CQQGIAAMK-ETGGSIINM--------ASVSSWLPIEQYAGYSASKAAVSALTRAAALSC 169

Query: 202 GR--YGIRVDCVS----HTYGLAMAEAIAS-------------------------IANAA 230
            +  Y IRV+ +     +T    M +A                            IA   
Sbjct: 170 RKQGYAIRVNSIHPDGIYT---PMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLV 226

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           L+ +A  D++S +    L  +   
Sbjct: 227 LF-LA-SDESSVMSGSELHADNSI 248

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  178 bits (454), Expect = 2e-55
 Identities = 78/267 (29%), Positives = 109/267 (40%), Gaps = 47/267 (17%)

Query: 20  SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCY 77
              RL+G++AI+TG +SGIG +AA LF + GAKVV+     N    L D++     +   
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLA 133
           +  DV +E     LV+  V +FG LD   N     G          I           L 
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALG------AMGEISSLSVEGWRETLD 115

Query: 134 VNTIGGFLVAKHAARVMVPRRRGCILYT-TGTGTTACTEIEGLCNIPANYYGVSKFGILG 192
            N    FL AK+    +     G + +T +  G TA     G   +    Y  SK G++G
Sbjct: 116 TNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA-----GFAGVAP--YAASKAGLIG 168

Query: 193 LVKSLAAELGRYGIRVDCVS-------------HTYGLAMAEAIAS------------IA 227
           LV++LA ELG  GIRV+ +                        +              IA
Sbjct: 169 LVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIA 228

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGGF 254
            AALY +A  D  S+V    LL +GG 
Sbjct: 229 EAALY-LAS-DGASFVTGAALLADGGA 253

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  175 bits (447), Expect = 9e-55
 Identities = 66/261 (25%), Positives = 105/261 (40%), Gaps = 47/261 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
              G+  ++TGGA GIG + AQ F + GA V + D++   G+ +A+ +G     +   D+
Sbjct: 3   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA---FFQVDL 58

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +ERE +  V+      G++D+LVN   N       S L     +  R+L VN      +
Sbjct: 59  EDERERVRFVEEAAYALGRVDVLVN---NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 115

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAAE 200
           +  AAR M     G I+            ++GL      A  Y  SK G++ L +SLA +
Sbjct: 116 SALAAREMRKVGGGAIVNVAS--------VQGLFAEQENAA-YNASKGGLVNLTRSLALD 166

Query: 201 LGRYGIRVDCV---------------SHTYGLAMAEAIAS------------IANAALYN 233
           L    IRV+ V                                         +A A L+ 
Sbjct: 167 LAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF- 225

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
           +A  +  S++    L V+GG 
Sbjct: 226 LA-SEKASFITGAILPVDGGM 245

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  175 bits (446), Expect = 1e-54
 Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 44/265 (16%)

Query: 20  SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCY 77
           SY  L+ +V I+TG  SGIG + A+ F  N + VV  ++ ++    +  +L     +V  
Sbjct: 1   SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLG 60

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DVS +++V   V  T   + ++D+L N+ G      G   + +      ER+LAVN 
Sbjct: 61  VKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIM---DGVTPVAEVSDELWERVLAVNL 117

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLV 194
              F  ++    +M+ + +G I+ T            G+      A  Y V+K G++GL 
Sbjct: 118 YSAFYSSRAVIPIMLKQGKGVIVNTASIA--------GIRGGFAGAP-YTVAKHGLIGLT 168

Query: 195 KSLAAELGRYGIRVDCV-------------SHTYGLAMAEAIAS------------IANA 229
           +S+AA  G  GIR   V             S    L M                  IAN 
Sbjct: 169 RSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANV 228

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGGF 254
            ++ +A  D+ S+V    ++V+GG 
Sbjct: 229 IVF-LA-SDEASFVNGDAVVVDGGL 251

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  174 bits (444), Expect = 3e-54
 Identities = 67/263 (25%), Positives = 105/263 (39%), Gaps = 45/263 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+G+VA+ITG  SG G   A+ F K GAKVVI D      + +A ++G      +  D+
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDA-ALAVAADI 64

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           S E +V   V+  ++KFGK+DILV N+G         +       + +R++ VN  G +L
Sbjct: 65  SKEADVDAAVEAALSKFGKVDILVNNAGIG---HKPQNAELVEPEEFDRIVGVNVRGVYL 121

Query: 142 VAKHAARVMVPRRRG----CILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKS 196
           +                   IL    TG             P   +Y  +K  ++ + K+
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTG--------AGRPRPNLAWYNATKGWVVSVTKA 173

Query: 197 LAAELGRYGIRVDCVS----HTYGLA---------MAEAIAS------------IANAAL 231
           LA EL    IRV  ++     T  L          + +                +A AA 
Sbjct: 174 LAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAA 233

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           + +      S +    L V+GG 
Sbjct: 234 F-LC-SPQASMITGVALDVDGGR 254

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  174 bits (444), Expect = 4e-54
 Identities = 67/276 (24%), Positives = 108/276 (39%), Gaps = 52/276 (18%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-- 73
            T S   R   RV +ITGG SG+G + A      GAK+ + DV     +A    +     
Sbjct: 3   ATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAP 62

Query: 74  --DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSD 127
             +V     DVS+E +V   V  T  +FG++D   N     G                ++
Sbjct: 63  DAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEG------KQNPTESFTAAE 116

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK 187
            ++++++N  G FL  +   ++M  +  G ++ T   G      I G+ N     Y  +K
Sbjct: 117 FDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG-----IRGIGNQSG--YAAAK 169

Query: 188 FGILGLVKSLAAELGRYGIRVDCV-----------------SHTYGLAMAEAIAS----- 225
            G++GL ++ A E GRYGIR++ +                         AE         
Sbjct: 170 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK 229

Query: 226 -------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                  IA    + +   DD SYV    + ++GG 
Sbjct: 230 RYGEAPEIAAVVAF-LL-SDDASYVNATVVPIDGGQ 263

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  173 bits (442), Expect = 4e-54
 Identities = 69/261 (26%), Positives = 108/261 (41%), Gaps = 44/261 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC-YIHCD 81
           RL G+VAIITGG  GIG + A  F + GAKV+I     ++G+  A  +G  D   +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            S+E     L D T   FG +  LVN   N       S+ +T  ++  +LLAVN  G F 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVN---NAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAE 200
             +   + M  +  G  +    +       IEG    P+   Y  SK  +  + KS A +
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSS-------IEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 201 LGR--YGIRVDCVS----HTYGLAMAEAIAS---------------------IANAALYN 233
                Y +RV+ V      T    + + +                       IA   +Y 
Sbjct: 173 CALKDYDVRVNTVHPGYIKT---PLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVY- 228

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
           +A  +++ +      +V+GG+
Sbjct: 229 LA-SNESKFATGSEFVVDGGY 248

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  172 bits (438), Expect = 3e-53
 Identities = 66/265 (24%), Positives = 105/265 (39%), Gaps = 55/265 (20%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
               +VAI+TGG+SGIG +      + GAKVV   + +     ++D        +   DV
Sbjct: 11  EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSD--------HFKIDV 62

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +NE EV   V+ T  K+G++DILVN   N     +  +  TP     R++ VN  G +L+
Sbjct: 63  TNEEEVKEAVEKTTKKYGRIDILVN---NAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLM 119

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAEL 201
           AK+   VM+    G I+            ++          Y  SK  +LGL +S+A + 
Sbjct: 120 AKYTIPVMLAIGHGSIINIAS--------VQSYAATKNAAAYVTSKHALLGLTRSVAIDY 171

Query: 202 GRYGIRVDCV-----------------SHTYGLAMAEAIAS---------------IANA 229
               IR + V                       A+   I                 +A  
Sbjct: 172 AP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEV 230

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGGF 254
             + +A  D +S++    L V+GG 
Sbjct: 231 VAF-LA-SDRSSFITGACLTVDGGL 253

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  169 bits (431), Expect = 2e-52
 Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 37/256 (14%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIHCDV 82
            RVAI+TG +SG G + A  F   G +V   D+     +  A    H     V  +  DV
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++E +V   +  T+ +FG +D+LVN+           +  TP    ++++AVN  G FL 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAEL 201
            +     M+ +  G I+            +  L   P  + Y  SK  +L L KS+A + 
Sbjct: 122 CRAVLPHMLLQGAGVIVNI--------ASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDY 173

Query: 202 GRYGIRVDCV-----------SHTYGLAMAEAIAS------------IANAALYNMAKDD 238
              GIR + V                  + + + +            +A+A ++ +A  +
Sbjct: 174 AGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMF-LA-GE 231

Query: 239 DTSYVGKQNLLVNGGF 254
           D +YV    L+++G +
Sbjct: 232 DATYVNGAALVMDGAY 247

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  169 bits (430), Expect = 7e-52
 Identities = 65/265 (24%), Positives = 96/265 (36%), Gaps = 47/265 (17%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-----DVC 76
              Q R  ++TGG SGIG   A      GA V+I     +       +L         + 
Sbjct: 7   LSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIR 66

Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVN 135
           Y   D++NE E    VD   A  G+L  +V+  G +        I         R + +N
Sbjct: 67  YEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGS---ENIGPITQVDSEAWRRTVDLN 123

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
             G   V KHAAR MV    G  +  +                 A  YGV+K  +  L++
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAA-----SNTHRWFGA--YGVTKSAVDHLMQ 176

Query: 196 SLAAELGRYGIRVDCVS----HTYGLAMAEAIAS----------------------IANA 229
             A ELG   +RV+ +      T    +  AI                        +AN 
Sbjct: 177 LAADELGASWVRVNSIRPGLIRT---DLVAAITESAELSSDYAMCTPLPRQGEVEDVANM 233

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGGF 254
           A++ +   D  S+V  Q + V+GG 
Sbjct: 234 AMF-LL-SDAASFVTGQVINVDGGQ 256

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  168 bits (427), Expect = 1e-51
 Identities = 66/258 (25%), Positives = 108/258 (41%), Gaps = 36/258 (13%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
           RL  RVAI+TGGA  IG +      + GA+V+IAD+ + +     + L  +  DV  +  
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DV+N   V N V +   + G++DILV   G        V   D       + + +N  G 
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGIC---ISEVKAEDMTDGQWLKQVDINLNGM 126

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F   +   R+M+ +++G I+             +         Y  SK G+   ++SLAA
Sbjct: 127 FRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAA-----YNASKAGVHQYIRSLAA 181

Query: 200 ELGRYGIRVDCVSHTY--------GLAMAEAIAS---------------IANAALYNMAK 236
           E   +GIR + V+ TY        G+   E   +               +A+   + +A 
Sbjct: 182 EWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQF-LA- 239

Query: 237 DDDTSYVGKQNLLVNGGF 254
            D  S +    + V+ GF
Sbjct: 240 SDAASLMTGAIVNVDAGF 257

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  168 bits (427), Expect = 2e-51
 Identities = 60/268 (22%), Positives = 98/268 (36%), Gaps = 49/268 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
                VA+ITG  SGIG + A     +G  V          + +AD++         +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVS+E ++ N V   V KFG LDI+V + G N     +  I D    + +  +AVN  G 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGIN---GVWAPIDDLKPFEWDETIAVNLRGT 141

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           FL        +  R  G I+  +    T      G        Y  +K   + +V+ LA 
Sbjct: 142 FLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATA-----YTATKAAQVAIVQQLAL 196

Query: 200 ELGRYGIRVDCVS----HTYGLAMAEAIAS-----------------------------I 226
           ELG++ IRV+ V      T    +++                                 +
Sbjct: 197 ELGKHHIRVNAVCPGAIET---NISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDV 253

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           A    + +   +   +V    + ++GG 
Sbjct: 254 AELIRF-LV-SERARHVTGSPVWIDGGQ 279

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  167 bits (425), Expect = 3e-51
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 13/192 (6%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
           +  G+V ++TG    IG + A    + G  + + D+     +     +  +  +     C
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DV++E  VI  VD+ V  FGK+D L N+ G       F  + D P  D  R+L +N  G 
Sbjct: 64  DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQ---GAFAPVQDYPSDDFARVLTINVTGA 120

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F V K  +R M+ +  G I+ T          ++G  N+ A  YG SK  I+ L ++ A 
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAG-----VKGPPNMAA--YGTSKGAIIALTETAAL 173

Query: 200 ELGRYGIRVDCV 211
           +L  Y IRV+ +
Sbjct: 174 DLAPYNIRVNAI 185

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  167 bits (424), Expect = 5e-51
 Identities = 58/265 (21%), Positives = 98/265 (36%), Gaps = 44/265 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           +L G VA+ITGGASG+G +    F   GA+V + D      + L    G      +  DV
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGN-AVGVVGDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSI-LDTPKSDLERLLAVNTIGGF 140
            + ++     +  +A FGK+D L+ N+G          +  D   +  + +  VN  G  
Sbjct: 61  RSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYI 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
              K     +V   RG +++T                 P   Y  +K  ++GLV+ +A E
Sbjct: 121 HAVKACLPALV-SSRGSVVFTISNAG-----FYPNGGGPL--YTATKHAVVGLVRQMAFE 172

Query: 201 LGRYGIRVDCVS-------------------HTYGLAMAEAIAS------------IANA 229
           L    +RV+ V+                       + +A+ + S               A
Sbjct: 173 LAP-HVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGA 231

Query: 230 ALYNMAKDDDTSYVGKQNLLVNGGF 254
            ++  A   D+       L  +GG 
Sbjct: 232 YVF-FATRGDSLPATGALLNYDGGM 255

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  166 bits (422), Expect = 5e-51
 Identities = 66/258 (25%), Positives = 102/258 (39%), Gaps = 38/258 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            L+ +VA++T    GIG + A+   ++GA VV++  +          L  +   V    C
Sbjct: 11  PLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVC 70

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            V    +   LV   V   G +DILV N+  N     F +I+D  +   +++L VN    
Sbjct: 71  HVGKAEDRERLVAMAVNLHGGVDILVSNAAVN---PFFGNIIDATEEVWDKILHVNVKAT 127

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
            L+ K     M  R  G +L  +  G  A      L       Y VSK  +LGL K+LA 
Sbjct: 128 VLMTKAVVPEMEKRGGGSVLIVSSVG--AYHPFPNLGP-----YNVSKTALLGLTKNLAV 180

Query: 200 ELGRYGIRVDCV-----------SHTYGLAMAEAIAS------------IANAALYNMAK 236
           EL    IRV+C+                 A  E +               A    + +  
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSF-LC- 238

Query: 237 DDDTSYVGKQNLLVNGGF 254
            +D SY+  + ++V GG 
Sbjct: 239 SEDASYITGETVVVGGGT 256

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  166 bits (422), Expect = 6e-51
 Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 48/265 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+G+ A+ITG A GIG + A+ + + GA V IAD+     +  A ++G      +  DV
Sbjct: 5   RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPA-AYAVQMDV 63

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + +  +   +  TV   G LDILVN   N        I++  +   E+L A+N  G    
Sbjct: 64  TRQDSIDAAIAATVEHAGGLDILVN---NAALFDLAPIVEITRESYEKLFAINVAGTLFT 120

Query: 143 AKHAARVMVPRRR-GCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            + AAR M+ + R G I+      G         +       Y  +K  ++ L +S   +
Sbjct: 121 LQAAARQMIAQGRGGKIINMASQAGRRG---EALVAI-----YCATKAAVISLTQSAGLD 172

Query: 201 LGRYGIRVDCV---------------------SHTYGLAMAEAIASI-----------AN 228
           L ++ I V+ +                     +   G        ++             
Sbjct: 173 LIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG 232

Query: 229 AALYNMAKDDDTSYVGKQNLLVNGG 253
            A++ +A   ++ Y+  Q   V+GG
Sbjct: 233 MAIF-LA-SAESDYIVSQTYNVDGG 255

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  165 bits (419), Expect = 3e-50
 Identities = 66/269 (24%), Positives = 110/269 (40%), Gaps = 46/269 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----HQDVCY 77
           R   +VAIITG ++GIG + A LF + GAKV I        +    ++       Q+V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DV+ +     ++ TT+ KFGKLDILVN+ G  +      +         +  L +N 
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVK 195
                + K A   +    +G I+  +           GL   P   YY ++K  I    +
Sbjct: 123 RSVIALTKKAVPHLS-STKGEIVNISSIA-------SGLHATPDFPYYSIAKAAIDQYTR 174

Query: 196 SLAAELGRYGIRVDCVS----------------------HTYGLAMAEAIAS-------- 225
           + A +L ++GIRV+ +S                      ++    M E + +        
Sbjct: 175 NTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 234

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           IA    + +A    +SY+    L+V+GG 
Sbjct: 235 IAEVIAF-LADRKTSSYIIGHQLVVDGGS 262

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  163 bits (416), Expect = 5e-50
 Identities = 54/269 (20%), Positives = 98/269 (36%), Gaps = 58/269 (21%)

Query: 20  SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIH 79
            +  L+ +V I+TG + GIG + A+ F   G+KV+   + D                +I 
Sbjct: 2   GFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEAK---------YDHIE 52

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV+N  +V   +D    ++G + +LVN   N     +  I      +  R++ VN  G 
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVN---NAGIESYGKIESMSMGEWRRIIDVNLFGY 109

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
           +  +K A   M+  R   I+          + ++        +  Y  SK  ++GL KS+
Sbjct: 110 YYASKFAIPYMIRSRDPSIVNI--------SSVQASIITKNASA-YVTSKHAVIGLTKSI 160

Query: 198 AAELGRYGIRVDCV--------------------SHTYGLAMAEAIAS------------ 225
           A +     +R + V                                              
Sbjct: 161 ALDYAP-LLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQE 219

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           +A+A  + +A   + S++    L V+GG 
Sbjct: 220 VASAVAF-LA-SREASFITGTCLYVDGGL 246

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  163 bits (416), Expect = 6e-50
 Identities = 62/260 (23%), Positives = 107/260 (41%), Gaps = 43/260 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL  ++A+ITG  SGIG +AA+ F   GA+V I   + ++  A   ++G      I  D 
Sbjct: 26  RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGG-AVGIQADS 84

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +N  E+  L +   A+ G++D+L     N      + + +  +   +     N  G    
Sbjct: 85  ANLAELDRLYEKVKAEAGRIDVLFV---NAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFT 141

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            + A  ++   R   ++ T  T  +      G        Y  SK  +    ++   +L 
Sbjct: 142 VQKALPLL--ARGSSVVLTGSTAGST-----GTPAFSV--YAASKAALRSFARNWILDLK 192

Query: 203 RYGIRVDCVS----HTYGL------------AMAEAIAS------------IANAALYNM 234
             GIR++ +S     T GL             +  A+A+            +A AAL+ +
Sbjct: 193 DRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALF-L 251

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
           A  DD+S+V    L V+GG 
Sbjct: 252 A-SDDSSFVTGAELFVDGGS 270

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  163 bits (414), Expect = 8e-50
 Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 39/257 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL--GHQDVCYIHC 80
           RL G+ AIITG  +GIG   A  F   GA VV++D+  +    + D++           C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           D+++E+E+  L D  ++K GK+DILV N+G            D P +D  R   +N    
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGP-----KPFDMPMADFRRAYELNVFSF 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           F +++  A  M     G IL  T     A  +   + +     Y  SK     LV+++A 
Sbjct: 123 FHLSQLVAPEMEKNGGGVILTITSMA--AENKNINMTS-----YASSKAAASHLVRNMAF 175

Query: 200 ELGRYGIRVDCVSHTYGL-AMAEAIAS---------------------IANAALYNMAKD 237
           +LG   IRV+ ++    L    +++ +                     IANAAL+ +   
Sbjct: 176 DLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF-LC-S 233

Query: 238 DDTSYVGKQNLLVNGGF 254
              S+V  Q L V+GG 
Sbjct: 234 PAASWVSGQILTVSGGG 250

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  162 bits (413), Expect = 1e-49
 Identities = 67/268 (25%), Positives = 106/268 (39%), Gaps = 43/268 (16%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-- 73
              +   RL G+ A+ITG   GIGA  A+ F   GA++V++    +   A    LG Q  
Sbjct: 10  DRYAGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG 69

Query: 74  -DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERL 131
            DV  +  D++       L       FG LD+LVN+ G +        ++DT     +  
Sbjct: 70  TDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH----PQPVVDTDPQLFDAT 125

Query: 132 LAVNTIGGFLVAKHAARVMVPR-RRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFG 189
           +AVN     L+A    + MV     G I+                        Y  SK G
Sbjct: 126 IAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP--------LPDHYAYCTSKAG 177

Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTYGL-AMAEAIAS----------------------I 226
           ++   K LA ELG +GIR + V  T  L  M + +                        +
Sbjct: 178 LVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEV 237

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           ++A ++ +A  D  S +   ++ V+GG+
Sbjct: 238 SDAVVW-LA-SDAASMINGVDIPVDGGY 263

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  161 bits (411), Expect = 2e-49
 Identities = 64/262 (24%), Positives = 117/262 (44%), Gaps = 51/262 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+V I+T  A GIG +AA  F + GAKV+  D+ ++  Q L    G   +     DV
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG---IQTRVLDV 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNTIGG 139
           + +++    +D    +  +LD+L N        GFV   ++LD  + D +  + +N    
Sbjct: 60  TKKKQ----IDQFANEVERLDVLFNVA------GFVHHGTVLDCEEKDWDFSMNLNVRSM 109

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           +L+ K     M+ ++ G I+      ++  + ++G+ N     Y  +K  ++GL KS+AA
Sbjct: 110 YLMIKAFLPKMLAQKSGNIINM----SSVASSVKGVVNRCV--YSTTKAAVIGLTKSVAA 163

Query: 200 ELGRYGIRVDCV---------------SHTYGLAMAEAIAS------------IANAALY 232
           +  + GIR +CV               +                         IA   +Y
Sbjct: 164 DFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVY 223

Query: 233 NMAKDDDTSYVGKQNLLVNGGF 254
            +A  D+++YV    ++++GG+
Sbjct: 224 -LA-SDESAYVTGNPVIIDGGW 243

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  162 bits (412), Expect = 2e-49
 Identities = 58/262 (22%), Positives = 90/262 (34%), Gaps = 53/262 (20%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCD 81
             +G+VA++TG A GIG +        GA+V +AD     +   L           +  D
Sbjct: 25  GFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADLH----------LPGD 74

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +        L     A  G+LDI+VN   N        I +T  +D    L VN    F 
Sbjct: 75  LREAAYADGLPGAVAAGLGRLDIVVN---NAGVISRGRITETTDADWSLSLGVNVEAPFR 131

Query: 142 VAKHAARVMVPRRRGCILYTTGT-GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           + + A  +M     G I+      G        G        Y ++K  +  L + +  +
Sbjct: 132 ICRAAIPLMAAAGGGAIVNVASCWGLRP---GPGHAL-----YCLTKAALASLTQCMGMD 183

Query: 201 LGRYGIRVDCVS-------------HTYGLAMAEAIAS---------------IANAALY 232
               GIR++ V                 G     A+A                IA+  L+
Sbjct: 184 HAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLF 243

Query: 233 NMAKDDDTSYVGKQNLLVNGGF 254
            +A  D   Y+    + VNGG 
Sbjct: 244 -LA-SDAARYLCGSLVEVNGGK 263

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  160 bits (406), Expect = 4e-48
 Identities = 61/270 (22%), Positives = 116/270 (42%), Gaps = 52/270 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----HQDVCY 77
           R  G+  IITG ++GIG SAA +F K GA+V I    ++  +    ++       + +  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVN 135
           +  DV+      ++++TT+AKFGK+DILVN   N         +  D P    ++   +N
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVN---NAGANLADGTANTDQPVELYQKTFKLN 139

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTT--GTGTTACTEIEGLCNIPANYYGVSKFGILGL 193
                 + +     ++ + +G I+  +    G  A        +    YY  +K  +   
Sbjct: 140 FQAVIEMTQKTKEHLI-KTKGEIVNVSSIVAGPQA--------HSGYPYYACAKAALDQY 190

Query: 194 VKSLAAELGRYGIRVDCVS----------------------HTYGLAMAEAIAS------ 225
            +  A +L ++G+RV+ VS                      +++  +  E I        
Sbjct: 191 TRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKP 250

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             IAN  ++ +A  + +SY+  Q+++ +GG
Sbjct: 251 EEIANIIVF-LADRNLSSYIIGQSIVADGG 279

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  158 bits (402), Expect = 8e-48
 Identities = 51/268 (19%), Positives = 107/268 (39%), Gaps = 52/268 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
            L  +V +I+G    +G + A+   + GA +V+A       + +A ++   G +    + 
Sbjct: 8   LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRR-ALSVG 66

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            D++++ +V +LVD T+  +G++D+++N+              +T    +   + +   G
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNAFRV---PSMKPFANTTFEHMRDAIELTVFG 123

Query: 139 GFLVAKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
              + +     +    +G ++         +              Y ++K  +L + ++L
Sbjct: 124 ALRLIQGFTPALE-ESKGAVVNVNSMVVRHS--------QAKYGAYKMAKSALLAMSQTL 174

Query: 198 AAELGRYGIRVDCV-----------------SHTYGLAMAEAIAS--------------- 225
           A ELG  GIRV+ V                 +  YG ++ +   +               
Sbjct: 175 ATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDE 234

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGG 253
           +A+A L+ MA  D  S +  Q L VN G
Sbjct: 235 VASAILF-MA-SDLASGITGQALDVNCG 260

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  157 bits (400), Expect = 2e-47
 Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 41/259 (15%)

Query: 23  RLQGRVAIITGGA-SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYI 78
            L+G+V ++T  A +GIG++ A+     GA VVI+D  +       D+L   G   V  +
Sbjct: 19  LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAV 78

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV++   V  L+  TV K G+LD+LVN   N    G   ++D    + +R+L V    
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVN---NAGLGGQTPVVDMTDEEWDRVLNVTLTS 135

Query: 139 GFLVAKHAARVMVPRRR-GCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
                + A R        G I+      G  A        +     Y  +K G++ L + 
Sbjct: 136 VMRATRAALRYFRGVDHGGVIVNNASVLGWRA---QHSQSH-----YAAAKAGVMALTRC 187

Query: 197 LAAELGRYGIRVDCVS-------HTYGLAMAEAIAS---------------IANAALYNM 234
            A E   +G+R++ VS            + +E +                 +A    + +
Sbjct: 188 SAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAF-L 246

Query: 235 AKDDDTSYVGKQNLLVNGG 253
           A  D +SY+  + + V+  
Sbjct: 247 A-SDYSSYMTGEVVSVSSQ 264

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  158 bits (401), Expect = 2e-47
 Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 48/269 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-----GHQDVCY 77
           R   +  IITG ++GIG + A LF + GA V I        +     +       + V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DV+ E     ++++T+ +FGK+D+LVN+ G  +      +  D       + L +N 
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTT--GTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
                + K     +V   +G I+  +    G  A             YY ++K  +    
Sbjct: 123 QAVIEMTKKVKPHLV-ASKGEIVNVSSIVAGPQA--------QPDFLYYAIAKAALDQYT 173

Query: 195 KSLAAELGRYGIRVDCVS----------------------HTYGLAMAEAIAS------- 225
           +S A +L ++GIRV+ VS                      + +  +  E I         
Sbjct: 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE 233

Query: 226 -IANAALYNMAKDDDTSYVGKQNLLVNGG 253
            IAN  L+ +A  + + Y+  Q+++ +GG
Sbjct: 234 HIANIILF-LADRNLSFYILGQSIVADGG 261

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  156 bits (398), Expect = 2e-47
 Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 51/269 (18%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--D 74
           +  S + L   VAI+TG A+GIG + A  F K GA VV+ D++    +A+A  +      
Sbjct: 3   SYESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGK 62

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLER 130
              + C+V++E+    ++   + +FGK+ +LVN     G            D P SD E 
Sbjct: 63  AIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGPKP--------FDMPMSDFEW 114

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRRGCILYTT---GTGTTACTEIEGLCNIPANYYGVSK 187
              +N    F +++ AA  M     G IL  +   G  T        + +     YG SK
Sbjct: 115 AFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV-----RMAS-----YGSSK 164

Query: 188 FGILGLVKSLAAELGRYGIRVDCV----------SHTYGLAMAEAIAS------------ 225
             +  L +++A ++G  GIRV+ +          +      +  A+              
Sbjct: 165 AAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQD 224

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           IANAAL+ +      +++  Q L V+GG 
Sbjct: 225 IANAALF-LC-SPAAAWISGQVLTVSGGG 251

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  156 bits (396), Expect = 4e-47
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 37/256 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHCD 81
           RL+ ++A+ITGGA+GIG + A+ F   GA + IAD+      +A    LG + V  + CD
Sbjct: 4   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR-VLTVKCD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           VS   +V       ++ FG+ DILVN   N      +   +      ++   +N   GFL
Sbjct: 63  VSQPGDVEAFGKQVISTFGRCDILVN---NAGIYPLIPFDELTFEQWKKTFEINVDSGFL 119

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           +AK     M     G I+    T TT   +IE   +     Y  +K   +G  ++LA++L
Sbjct: 120 MAKAFVPGMKRNGWGRIINL--TSTTYWLKIEAYTH-----YISTKAANIGFTRALASDL 172

Query: 202 GRYGIRVDCV-------------SHTYGLAMAEAIAS----------IANAALYNMAKDD 238
           G+ GI V+ +             + +    +   +            +  AA + +A  D
Sbjct: 173 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF-LA-SD 230

Query: 239 DTSYVGKQNLLVNGGF 254
           D S++  Q L V+GG 
Sbjct: 231 DASFITGQTLAVDGGM 246

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  156 bits (397), Expect = 5e-47
 Identities = 64/266 (24%), Positives = 102/266 (38%), Gaps = 41/266 (15%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GH 72
                    +GR+A++TGG +G+G   AQ     G  VVI   + ++  A A ++     
Sbjct: 23  MMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTG 82

Query: 73  QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERL 131
             V  + CDV +  +V  L     A+F +LD+LVN+ G N      V + +        +
Sbjct: 83  NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSN---VPPVPLEEVTFEQWNGI 139

Query: 132 LAVNTIGGFLVAKHAARVMVPR--RRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSK 187
           +A N  G FL  +HA R+M  +  R G I+            I      P  A  Y  +K
Sbjct: 140 VAANLTGAFLCTQHAFRMMKAQTPRGGRII--------NNGSISAQTPRPNSAP-YTATK 190

Query: 188 FGILGLVKSLAAELGRYGIRVDCV---------SHTYGLAMAEAIAS-----------IA 227
             I GL KS A +   + I    +         +      + +A              IA
Sbjct: 191 HAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGVLQANGEVAAEPTIPIEHIA 250

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
            A +Y MA    ++ V    ++    
Sbjct: 251 EAVVY-MASLPLSANVLTMTVMATRM 275

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  155 bits (393), Expect = 1e-46
 Identities = 55/259 (21%), Positives = 99/259 (38%), Gaps = 43/259 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             QG+ AI+ GG  G+G +  +   + GA+V++    ++    + ++ G + V  +  D+
Sbjct: 5   NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPR-VHALRSDI 63

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++  E+  L        G +D+L     N             ++  +R  AVNT G F  
Sbjct: 64  ADLNEIAVLGAAAGQTLGAIDLLHI---NAGVSELEPFDQVSEASYDRQFAVNTKGAFFT 120

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +    ++  R  G I++T  +         G+       Y  SK  ++     LAAEL 
Sbjct: 121 VQRLTPLI--REGGSIVFT--SSVADEGGHPGMSV-----YSASKAALVSFASVLAAELL 171

Query: 203 RYGIRVDCVS---------HTYGL------AMAEAIAS------------IANAALYNMA 235
             GIRV+ VS            G+             +            +A A L+ +A
Sbjct: 172 PRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLF-LA 230

Query: 236 KDDDTSYVGKQNLLVNGGF 254
              + ++     L V+GG 
Sbjct: 231 --FEATFTTGAKLAVDGGL 247

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  154 bits (391), Expect = 2e-46
 Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 46/261 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
           R + +V I+TG   GIG + A+   + GA VV+AD+     +A+A ++   G      + 
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGT-AISVA 64

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            DVS+      + D T+A+FG +D LVN+       +    +L       ++ ++VN  G
Sbjct: 65  VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMK-LDFLLTIDPEYYKKFMSVNLDG 123

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
                +   + M  R  G I+          +            YG++K GI GL + L+
Sbjct: 124 ALWCTRAVYKKMTKRGGGAIVNQ--------SSTAAWLYSNY--YGLAKVGINGLTQQLS 173

Query: 199 AELGRYGIRVDCVS----HTYGLAMAEAIAS---------------------IANAALYN 233
            ELG   IR++ ++     T                                +    L+ 
Sbjct: 174 RELGGRNIRINAIAPGPIDT---EANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLF- 229

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
           +   D+ S++  Q   V+GG 
Sbjct: 230 LL-SDEASWITGQIFNVDGGQ 249

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  154 bits (391), Expect = 3e-46
 Identities = 59/255 (23%), Positives = 100/255 (39%), Gaps = 39/255 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           +   ++AI+TG  SG+G + A      G  V +A  + +  Q  A ++G  D   +  DV
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD-DALCVPTDV 83

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++   V  L   TV KFG++D+L N+ G        + + D   +  ++++  N  G FL
Sbjct: 84  TDPDSVRALFTATVEKFGRVDVLFNNAGTG---APAIPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 142 VAKHAARVMVPR--RRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
             + A RVM  +  R G I+            I      P  A  Y  +K  I GL KS 
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINN--------GSISATSPRPYSAP-YTATKHAITGLTKST 191

Query: 198 AAELGRYGIRVDCVS---------HTYGLAMAEAIAS-----------IANAALYNMAKD 237
           + +   + I    +                + +A  S           +A+A +Y MA  
Sbjct: 192 SLDGRVHDIACGQIDIGNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVY-MASL 250

Query: 238 DDTSYVGKQNLLVNG 252
              + V    ++   
Sbjct: 251 PLDANVQFMTIMATK 265

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  153 bits (389), Expect = 3e-46
 Identities = 47/264 (17%), Positives = 97/264 (36%), Gaps = 57/264 (21%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
                 ++TGG+ GIG +  +L  +N    VI          +      +++ +I  D++
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINI-------DIQQSFSAENLKFIKADLT 54

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
            ++++ N++D    K    D +     N       SI D     ++++L +N        
Sbjct: 55  KQQDITNVLDI--IKNVSFDGIFL---NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAELG 202
           K     +  +    I++            +     P ++ Y +SK  I  + KSLA +L 
Sbjct: 110 KGLENNL--KVGASIVFN--------GSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLA 159

Query: 203 RYGIRVDCVS-----------------HTYGLAMAEAIAS---------------IANAA 230
           +Y IRV+ V                  +  G++  EA                  IA   
Sbjct: 160 KYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELV 219

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           ++ +   D + ++    + ++GG+
Sbjct: 220 IF-LL-SDKSKFMTGGLIPIDGGY 241

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  154 bits (391), Expect = 4e-46
 Identities = 53/270 (19%), Positives = 88/270 (32%), Gaps = 49/270 (18%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ----DVCY 77
           Y L   VA++TGG+SGIG +  +L  + GA V          +A    L  +     +  
Sbjct: 4   YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFA 63

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
             CDV +  +V    +      G   ILVN   N       +  +T        L +   
Sbjct: 64  SVCDVLDALQVRAFAEACERTLGCASILVN---NAGQGRVSTFAETTDEAWSEELQLKFF 120

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
                 +     +  R    I+        A      +          ++ G+  LV+S+
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLL--ASQPEPHMVA-----TSAARAGVKNLVRSM 173

Query: 198 AAELGRYGIRVDCV-------------------------SHTYGLAMAEAI--------A 224
           A E    G+RV+ +                           T  LA  + I         
Sbjct: 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPI 233

Query: 225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF 254
             A A L+ +A    ++Y    ++ V+GG 
Sbjct: 234 EAARAILF-LA-SPLSAYTTGSHIDVSGGL 261

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  154 bits (391), Expect = 5e-46
 Identities = 50/197 (25%), Positives = 87/197 (44%), Gaps = 16/197 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           + +G  AI++GGA G+G +  +  H +G  VVIAD+    G+ALAD+LG     ++  +V
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-NRAEFVSTNV 85

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKS--DLERLLAVNTIGGF 140
           ++E  V+  ++           +V  G     +  V    +P       + + +   G +
Sbjct: 86  TSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTY 145

Query: 141 LVAKHAARVMVPRR------RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
            VA+  A  +          RG ++ T           EG   I    Y  +K G++GL 
Sbjct: 146 NVARLVAASIAAAEPRENGERGALVLTASIAG-----YEG--QIGQTAYAAAKAGVIGLT 198

Query: 195 KSLAAELGRYGIRVDCV 211
            + A +L   GIRV+ +
Sbjct: 199 IAAARDLSSAGIRVNTI 215

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  153 bits (390), Expect = 5e-46
 Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 51/260 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+  ++TG ASGIG +A  LF + GA +V  D ++ L       L  +    +  DV
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAE-AIAVVADV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           S+ + V  +    + +FG+L  + +    +   L         + P    E++L VN  G
Sbjct: 62  SDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSAL-------SWNLPLEAWEKVLRVNLTG 114

Query: 139 GFLVAKHAARVMVPRRRGCILYTT---GTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
            FLVA+ A  V+     G ++ T    G G        GL +     Y   K G++GL +
Sbjct: 115 SFLVARKAGEVL--EEGGSLVLTGSVAGLGAF------GLAH-----YAAGKLGVVGLAR 161

Query: 196 SLAAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIANAALYNM 234
           +LA EL R G+RV+ +         T GL          A           +A AAL+ +
Sbjct: 162 TLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALF-L 220

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
              ++++Y+  Q L V+GG 
Sbjct: 221 L-SEESAYITGQALYVDGGR 239

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  153 bits (388), Expect = 6e-46
 Identities = 55/257 (21%), Positives = 96/257 (37%), Gaps = 51/257 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           R Q +V +ITG + GIGA   + +     +VV                   D+  +  D+
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRS-------IKPSADPDIHTVAGDI 77

Query: 83  SNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           S       +V   + +FG++D LVN                 ++  + D +  L VN  G
Sbjct: 78  SKPETADRIVREGIERFGRIDSLVNNAGVFLAKP-------FVEMTQEDYDHNLGVNVAG 130

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANY-YGVSKFGILGLVK 195
            F + + AA  M+ +  G I+          T       +    +    ++K G+  + +
Sbjct: 131 FFHITQRAAAEMLKQGSGHIVSI--------TTSLVDQPMVGMPSALASLTKGGLNAVTR 182

Query: 196 SLAAELGRYGIRVDCVS----HT--YGLAMAEAIAS------------IANAALYNMAKD 237
           SLA E  R G+RV+ VS     T  +       +A             + +A LY     
Sbjct: 183 SLAMEFSRSGVRVNAVSPGVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL---- 238

Query: 238 DDTSYVGKQNLLVNGGF 254
           +   ++  + L V+GG 
Sbjct: 239 EHAGFITGEILHVDGGQ 255

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  152 bits (386), Expect = 1e-45
 Identities = 45/254 (17%), Positives = 91/254 (35%), Gaps = 40/254 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIH 79
            L  R+ ++TG + GIG  AA  + + GA V++    +   + +A    +   +   +  
Sbjct: 9   LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFI 68

Query: 80  CD--VSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
            D           L       + +LD ++++ G          + +      + ++ VN 
Sbjct: 69  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAG---LLGDVCPMSEQNPQVWQDVMQVNV 125

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
              F++ +    +++    G +++T+   G                 Y  SKF   G+++
Sbjct: 126 NATFMLTQALLPLLLKSDAGSLVFTSSSVGRQG---RANWGA-----YAASKFATEGMMQ 177

Query: 196 SLAAELGRYGIRVDCVS----HTYGLAMAEAI------------ASIANAALYNMAKDDD 239
            LA E  +  +RV+C++     T   AM  +             A I    L+ M   DD
Sbjct: 178 VLADEYQQ-RLRVNCINPGGTRT---AMRASAFPTEDPQKLKTPADIMPLYLWLMG--DD 231

Query: 240 TSYVGKQNLLVNGG 253
           +            G
Sbjct: 232 SRRKTGMTFDAQPG 245

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  151 bits (384), Expect = 4e-45
 Identities = 59/256 (23%), Positives = 94/256 (36%), Gaps = 34/256 (13%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD----------KLGH 72
            L G+   ITG + GIG + A    ++GA V IA         L              G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 73  QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLL 132
           Q +  + CD+  E +V   V  TV  FG +DILVN   N         LDTP    + + 
Sbjct: 63  QGLA-LKCDIREEDQVRAAVAATVDTFGGIDILVN---NASAIWLRGTLDTPMKRFDLMQ 118

Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILG 192
            VN  G F+ A+     ++      IL      +                Y ++K G+  
Sbjct: 119 QVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTG-----YTLAKMGMSL 173

Query: 193 LVKSLAAELGRYGIRVDCVS-----HTYGLAMAEAIAS--------IANAALYNMAKDDD 239
           +   LAAE G  G+ ++ +       T  + M   + +        +A+AA   +    +
Sbjct: 174 VTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHA-VLT-RE 231

Query: 240 TSYVGKQNLLVNGGFR 255
            +    Q L+ +    
Sbjct: 232 AAGFHGQFLIDDEVLA 247

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  150 bits (382), Expect = 5e-45
 Identities = 66/256 (25%), Positives = 103/256 (40%), Gaps = 36/256 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G  A +TG  SGIG    + F  +GA++++ D +       A +LG      I  DV
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADV 67

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++   +             + ILVNS G           L+T  +   +++AVN  G F 
Sbjct: 68  TDAEAMTAAAA-EAEAVAPVSILVNSAGIAR----LHDALETDDATWRQVMAVNVDGMFW 122

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
            ++   R MV R  G I+     G+ + T +       +  Y  SK  +  L ++LAAE 
Sbjct: 123 ASRAFGRAMVARGAGAIV---NLGSMSGTIVNRPQFASS--YMASKGAVHQLTRALAAEW 177

Query: 202 GRYGIRVDCVSHTY--------GLAMAEAIASI---------------ANAALYNMAKDD 238
              G+RV+ ++  Y             E   +                A AAL+ +A   
Sbjct: 178 AGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALF-LA-SP 235

Query: 239 DTSYVGKQNLLVNGGF 254
             SYV    L V+GG+
Sbjct: 236 AASYVTGAILAVDGGY 251

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  150 bits (382), Expect = 7e-45
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 27/199 (13%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ----DVCY 77
           + + G+VA++TG A GIG + A+     GAKV + D     G      L  Q       +
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLF 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           I CDV++++++ +     V  FG+LDILVN+ G          +    + + E+ L +N 
Sbjct: 63  IQCDVADQQQLRDTFRKVVDHFGRLDILVNNAG----------V--NNEKNWEKTLQINL 110

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLV 194
           +            M  +  G      G      + + GL  +      Y  SK GI+G  
Sbjct: 111 VSVISGTYLGLDYMSKQNGG-----EGGIIINMSSLAGLMPVAQQPV-YCASKHGIVGFT 164

Query: 195 KS--LAAELGRYGIRVDCV 211
           +S  LAA L   G+R++ +
Sbjct: 165 RSAALAANLMNSGVRLNAI 183

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  150 bits (381), Expect = 8e-45
 Identities = 63/275 (22%), Positives = 98/275 (35%), Gaps = 58/275 (21%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
           +  + L GR AI+TGG+ GIGA+ A+   K GA V IAD+     QA+   L       +
Sbjct: 5   AGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE-NGGFAV 63

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAV 134
             DV+    V   +   +   G  D+L      S            +D    + +    V
Sbjct: 64  EVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTMRP-------AVDITDEEWDFNFDV 116

Query: 135 NTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGIL 191
           N  G FL  + A R  +     G I+ T          +      P  A+ Y  SKF + 
Sbjct: 117 NARGVFLANQIACRHFLASNTKGVIVNT--------ASLAAKVGAPLLAH-YSASKFAVF 167

Query: 192 GLVKSLAAELGRYGIRVDCV-------SHTYGL-----------------AMAEAIAS-- 225
           G  ++LA E+    IRV+CV       +                                
Sbjct: 168 GWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR 227

Query: 226 ------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                 +A+  ++ +A  D   ++  Q + V GG 
Sbjct: 228 IEEPEDVADVVVF-LA-SDAARFMTGQGINVTGGV 260

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  151 bits (383), Expect = 1e-44
 Identities = 69/265 (26%), Positives = 110/265 (41%), Gaps = 49/265 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-------DV 75
            LQG+VAI+TGGA+GIG +  +   + G+ VVIA  +    ++ AD+L           V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVS-ILDTPKSDLERLLA 133
             I C++ NE EV NLV +T+  FGK++ LVN  G       F+S            +L 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-----FLSPAEHISSKGWHAVLE 129

Query: 134 VNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGL 193
            N  G F + K      +    G I+                    A + G ++ G+  L
Sbjct: 130 TNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAG--------FPLAVHSGAARAGVYNL 181

Query: 194 VKSLAAELGRYGIRVDCVSHTY-------------GLAMAEAIAS------------IAN 228
            KSLA E    GIR++CV+                G +  E                +++
Sbjct: 182 TKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS 241

Query: 229 AALYNMAKDDDTSYVGKQNLLVNGG 253
              + ++     S++  Q++ V+GG
Sbjct: 242 VVCFLLS--PAASFITGQSVDVDGG 264

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  149 bits (379), Expect = 1e-44
 Identities = 41/193 (21%), Positives = 71/193 (36%), Gaps = 17/193 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
             +     + G    IGA  A+ F   G  V            L  ++      +     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSL 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D  NE EV   ++        L++ +    N+       IL+T      ++  +    GF
Sbjct: 64  DARNEDEVTAFLN-AADAHAPLEVTIF---NVGANVNFPILETTDRVFRKVWEMACWAGF 119

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLA 198
           +  + +AR+M+   +G I +   TG TA      L      A  +  +KFG+  + +S+A
Sbjct: 120 VSGRESARLMLAHGQGKIFF---TGATA-----SLRGGSGFAA-FASAKFGLRAVAQSMA 170

Query: 199 AELGRYGIRVDCV 211
            EL    I V  +
Sbjct: 171 RELMPKNIHVAHL 183

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  148 bits (377), Expect = 2e-44
 Identities = 54/242 (22%), Positives = 99/242 (40%), Gaps = 34/242 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQ--DVCY 77
            L+GRV ++TG A GIGA+AA+ +  +GA VV+    +     ++D     G     +  
Sbjct: 11  LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIA 70

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           ++ + +  ++   L      +FG+LD L+++            +   P  D  +++ VN 
Sbjct: 71  LNLENATAQQYRELAARVEHEFGRLDGLLHNASII---GPRTPLEQLPDEDFMQVMHVNV 127

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
              F++ +    ++       I +T+   G                 YGVSKF   GL++
Sbjct: 128 NATFMLTRALLPLLKRSEDASIAFTSSSVGRKG---RANWGA-----YGVSKFATEGLMQ 179

Query: 196 SLAAEL-GRYGIRVDCVS----HT--YGLAMAEAIA-------SIANAALYNMAKDDDTS 241
           +LA EL G   +R + ++     T     A  +           I    LY M    D++
Sbjct: 180 TLADELEGVTAVRANSINPGATRTGMRAQAYPDENPLNNPAPEDIMPVYLYLMG--PDST 237

Query: 242 YV 243
            +
Sbjct: 238 GI 239

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  148 bits (377), Expect = 3e-44
 Identities = 56/258 (21%), Positives = 103/258 (39%), Gaps = 44/258 (17%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCD 81
               G  A++TG   GIG    +  H +GAKVV     ++   +LA +     +  +  D
Sbjct: 3   LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           + +        +  +   G +D+LVN+    +        L+  K   +R  +VN    F
Sbjct: 61  LGDWDA----TEKALGGIGPVDLLVNNAALVI----MQPFLEVTKEAFDRSFSVNLRSVF 112

Query: 141 LVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
            V++  AR M+ R   G I+  +              N+    Y  +K  +  L K++A 
Sbjct: 113 QVSQMVARDMINRGVPGSIVNVSSM-----VAHVTFPNLIT--YSSTKGAMTMLTKAMAM 165

Query: 200 ELGRYGIRVDCVSHTYGL-AMAEAIAS----------------------IANAALYNMAK 236
           ELG + IRV+ V+ T  L  M + +++                      + N+ L+ +  
Sbjct: 166 ELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF-LL- 223

Query: 237 DDDTSYVGKQNLLVNGGF 254
            D ++      +LV+ G+
Sbjct: 224 SDRSASTSGGGILVDAGY 241

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  148 bits (376), Expect = 3e-44
 Identities = 59/257 (22%), Positives = 96/257 (37%), Gaps = 44/257 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L GR  ++TG   GIG    Q  H  GA+VV          +L  +     +  +  D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            +        +  +   G +D+LVN+    L        L+  K   +R   VN      
Sbjct: 62  GDWEA----TERALGSVGPVDLLVNNAAVAL----LQPFLEVTKEAFDRSFEVNLRAVIQ 113

Query: 142 VAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           V++  AR ++ R   G I+       ++      + N     Y  +K  +  L K +A E
Sbjct: 114 VSQIVARGLIARGVPGAIV-----NVSSQCSQRAVTNHSV--YCSTKGALDMLTKVMALE 166

Query: 201 LGRYGIRVDCVSHTYGL-AMAEAIAS----------------------IANAALYNMAKD 237
           LG + IRV+ V+ T  + +M +A  S                      + NA L+ +   
Sbjct: 167 LGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF-LL-S 224

Query: 238 DDTSYVGKQNLLVNGGF 254
           D +       L V GGF
Sbjct: 225 DRSGMTTGSTLPVEGGF 241

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  149 bits (378), Expect = 4e-44
 Identities = 72/260 (27%), Positives = 116/260 (44%), Gaps = 43/260 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIH 79
            L G+ A+ITG ++GIG   A  + + GA+V +A    +  Q +AD    +G +    I 
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGK-ALPIR 87

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CDV+   +V  ++D    + G +DI V N+G         ++LD P  + +R+   N  G
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV----QAMLDMPLEEFQRIQDTNVTG 143

Query: 139 GFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLC-NIPANY--YGVSKFGILGLV 194
            FL A+ AAR MV +   G I+ T          + G   NIP     Y  SK  ++ L 
Sbjct: 144 VFLTAQAAARAMVDQGLGGTIITT--------ASMSGHIINIPQQVSHYCTSKAAVVHLT 195

Query: 195 KSLAAELGRYGIRVDCVSHTY--------GLAMAEAIAS------------IANAALYNM 234
           K++A EL  + IRV+ VS  Y                              +    LY +
Sbjct: 196 KAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLY-L 254

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
           A    +SY+   +++++GG+
Sbjct: 255 A-SAASSYMTGSDIVIDGGY 273

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  147 bits (374), Expect = 1e-43
 Identities = 52/263 (19%), Positives = 98/263 (37%), Gaps = 44/263 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            L+G  A++TGG+ GIG +  +     GA+V      +       +    +  +V    C
Sbjct: 18  SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVC 77

Query: 81  DVSNEREVINLVDTTVAKF-GKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           D+ +  E   L+ T    F GKL+ILVN +G  +         D  + D   ++  N   
Sbjct: 78  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVI----HKEAKDFTEKDYNIIMGTNFEA 133

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            + +++ A  ++   + G +++ +            L ++    Y  SK  I  + KSLA
Sbjct: 134 AYHLSQIAYPLLKASQNGNVIFLSSIAG-----FSALPSVSL--YSASKGAINQMTKSLA 186

Query: 199 AELGRYGIRVDCV---------------SHTYGLAMAEAIAS------------IANAAL 231
            E  +  IRV+ V                + +     +                ++    
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           + +      SY+  Q +  +GGF
Sbjct: 247 F-LC-FPAASYITGQIIWADGGF 267

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  147 bits (372), Expect = 2e-43
 Identities = 61/198 (30%), Positives = 95/198 (47%), Gaps = 17/198 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            ++G VA+ITGGASG+G + A+     GA  V+ D+ ++ G+A A KLG  +  +   DV
Sbjct: 9   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADV 67

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE---RLLAVNTIGG 139
           ++E++V   +     KFG++D+ VN           ++       LE   R+L VN +G 
Sbjct: 68  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 127

Query: 140 FLVAKHAARVMV------PRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGL 193
           F V +  A  M         +RG I+ T           EG   +    Y  SK GI+G+
Sbjct: 128 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA-----FEG--QVGQAAYSASKGGIVGM 180

Query: 194 VKSLAAELGRYGIRVDCV 211
              +A +L   GIRV  +
Sbjct: 181 TLPIARDLAPIGIRVMTI 198

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  146 bits (371), Expect = 2e-43
 Identities = 39/254 (15%), Positives = 83/254 (32%), Gaps = 39/254 (15%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV 75
             L        +  ++ GG+  +GA   + F       +  D ++N     +        
Sbjct: 12  SGLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS-------- 63

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAV 134
                  S E E+ ++++   +K  K+D  V + G    + G  +  D     ++ ++ +
Sbjct: 64  --FTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGG---WSGGNASSDEFLKSVKGMIDM 118

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           N    F  A   A+++   + G  +      T A   +     + A  YG +K     ++
Sbjct: 119 NLYSAFASAHIGAKLL--NQGGLFVL-----TGASAALNRTSGMIA--YGATKAATHHII 169

Query: 195 KSLAAELG--RYGIRVDCVSHTY------GLAMAEAIAS-------IANAALYNMAKDDD 239
           K LA+E G    G     +             M++A          +A       + + D
Sbjct: 170 KDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDWTPLSEVAEKLFE-WSTNSD 228

Query: 240 TSYVGKQNLLVNGG 253
           +       +     
Sbjct: 229 SRPTNGSLVKFETK 242

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  146 bits (371), Expect = 3e-43
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 43/263 (16%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQ--DVCY 77
           Y  L+G+V +ITG ++G+G S A  F    AKVV+      +   ++ +++     +   
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N  
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 138 GGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLV 194
           G FL ++ A +  V    +G ++          + +      P   + Y  SK G+  + 
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINM--------SSVHEKIPWPLFVH-YAASKGGMKLMT 169

Query: 195 KSLAAELGRYGIRVDCV-----------SHTYGLAMAEAIAS------------IANAAL 231
           ++LA E    GIRV+ +                      + S            IA  A 
Sbjct: 170 ETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAA 229

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           + +A   + SYV    L  +GG 
Sbjct: 230 W-LAS-SEASYVTGITLFADGGM 250

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  146 bits (371), Expect = 5e-43
 Identities = 51/263 (19%), Positives = 102/263 (38%), Gaps = 48/263 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIH 79
            L+G+VA +TG + GIG + A+ + + GA V I        +         G        
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVH-SKAYK 89

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           C++S+ + V   +      FG +D+ V N+G          I         ++++V+  G
Sbjct: 90  CNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPE--IDVDNYDSWNKIISVDLNG 147

Query: 139 GFLVAKHAARVMVPRRRGCILYTT---GTGTTACTEIEGLCNIP---ANYYGVSKFGILG 192
            +  + +  ++     +G ++ T+   G           + NIP   A  Y  +K     
Sbjct: 148 VYYCSHNIGKIFKKNGKGSLIITSSISGK----------IVNIPQLQAP-YNTAKAACTH 196

Query: 193 LVKSLAAELGRYGIRVDCVSHTY-GLAMAEAIAS--------------------IANAAL 231
           L KSLA E   +  RV+ +S  Y    + +  +                     +    L
Sbjct: 197 LAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYL 255

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +A  + +++    +++++GG+
Sbjct: 256 Y-LA-SNASTFTTGSDVVIDGGY 276

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  146 bits (370), Expect = 6e-43
 Identities = 56/258 (21%), Positives = 90/258 (34%), Gaps = 38/258 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD----------KLGH 72
            L+G+   I+GG+ GIG + A+    +GA V +          L            + G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 73  QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLL 132
           Q +  I  D+ +   V   V  TV +FG +DI VN   N       SI + P    + + 
Sbjct: 66  QALP-IVGDIRDGDAVAAAVAKTVEQFGGIDICVN---NASAINLGSIEEVPLKRFDLMN 121

Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILG 192
            +   G + V++     M  R    IL T         +           Y ++K+G+  
Sbjct: 122 GIQVRGTYAVSQSCIPHMKGRDNPHIL-TLSPPIRLEPKWLRPTP-----YMMAKYGMTL 175

Query: 193 LVKSLAAELGRYGIRVDCV--SHTYGLAMAEAIAS-------------IANAALYNMAKD 237
               +A EL   GI  + +    T   A  + +                A+AA      +
Sbjct: 176 CALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYV--VLN 233

Query: 238 DDTSYVGKQNLLVNGGFR 255
             +SY G   LL      
Sbjct: 234 KPSSYTG-NTLLCEDVLL 250

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  144 bits (366), Expect = 1e-42
 Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 15/196 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           +L+ RV I+TG +SG+GA+  ++  + GA V+  D++   G+  A +LG   V + + DV
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG-AAVRFRNADV 62

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           +NE +    +     +FG +  LVN  G     +              R +AVN IG F 
Sbjct: 63  TNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFN 122

Query: 142 VAKHAARVMVPRR------RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
           + + AA VM          RG I+ T           +G   I    Y  SK G+  L  
Sbjct: 123 MIRLAAEVMSQGEPDADGERGVIVNTASIAA-----FDG--QIGQAAYAASKGGVAALTL 175

Query: 196 SLAAELGRYGIRVDCV 211
             A EL R+GIRV  +
Sbjct: 176 PAARELARFGIRVVTI 191

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  145 bits (367), Expect = 2e-42
 Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 15/193 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
              GR A++TGGASGIG + A  F + GA++V++DV     +   + L  Q  D   + C
Sbjct: 28  GFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVC 87

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV +  E++ L D      G +D++ +   N        +      D   ++ ++  G  
Sbjct: 88  DVRHLDEMVRLADEAFRLLGGVDVVFS---NAGIVVAGPLAQMNHDDWRWVIDIDLWGSI 144

Query: 141 LVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLA 198
              +     ++ +   G I +T            GL        YGV+K+G++GL ++LA
Sbjct: 145 HAVEAFLPRLLEQGTGGHIAFTASFA--------GLVPNAGLGTYGVAKYGVVGLAETLA 196

Query: 199 AELGRYGIRVDCV 211
            E+   GI V  +
Sbjct: 197 REVKPNGIGVSVL 209

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  144 bits (365), Expect = 2e-42
 Identities = 59/268 (22%), Positives = 103/268 (38%), Gaps = 48/268 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALAD--KLGHQDVCYIH 79
            + G+VA+ITG +SGIG + A+ F K GA +V+     D L +A     +     V  + 
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVA 63

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV+    V  +V++  + FG  DILVN   N       +I++      +    +  +  
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVN---NAGTGSNETIMEAADEKWQFYWELLVMAA 120

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
             +A+     M  R  G I++       A   +          Y V+K  ++   K+LA 
Sbjct: 121 VRLARGLVPGMRARGGGAIIHNASIC--AVQPLWYEPI-----YNVTKAALMMFSKTLAT 173

Query: 200 ELGRYGIRVDCVS----HT-------------YGLAMAEAIAS----------------I 226
           E+ +  IRV+C++     T              G      + S                +
Sbjct: 174 EVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEEL 233

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           AN  ++ +   +  +Y       V+GG 
Sbjct: 234 ANFFVF-LC-SERATYSVGSAYFVDGGM 259

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  144 bits (365), Expect = 3e-42
 Identities = 68/276 (24%), Positives = 109/276 (39%), Gaps = 48/276 (17%)

Query: 11  DNNILPTLSSYYR---LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA 67
            ++ LP     +    L+ +VA ITGG SGIG   A++F ++G   VIA          A
Sbjct: 9   GDDCLPAYRHLFCPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAA 68

Query: 68  DKLGHQ---DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVS-ILD 122
            KL          +  DV     V+  VD  + +FG++DIL+N +  N     F+     
Sbjct: 69  RKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGN-----FLCPAGA 123

Query: 123 TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT-GTTACTEIEGLCNIPAN 181
              +  + ++ ++T G F V++           G I+  T T G                
Sbjct: 124 LSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG--------QALQV 175

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVS-----HTYG---LAMAEAIAS-------- 225
           + G +K  +  + + LA E G   IRV+ ++      T G   L   +A  S        
Sbjct: 176 HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL 235

Query: 226 --------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                   IA++ LY  +     SYV    L+ +GG
Sbjct: 236 QRLGNKTEIAHSVLYLAS--PLASYVTGAVLVADGG 269

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  143 bits (364), Expect = 5e-42
 Identities = 62/270 (22%), Positives = 109/270 (40%), Gaps = 53/270 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ---DVCYI 78
            +  + A+ITG  SGIG + A+   K GA +V+      +  + + D++       V + 
Sbjct: 22  SMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D++   E+ +++     +FG  DILVN   N   +    I D P    +R++AVN   
Sbjct: 82  PADMTKPSEIADMMAMVADRFGGADILVN---NAGVQFVEKIEDFPVEQWDRIIAVNLSS 138

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKS 196
            F   + A   M  +  G I+              GL   P  + Y   +K GI+GL K+
Sbjct: 139 SFHTIRGAIPPMKKKGWGRIIN--------IASAHGLVASPFKSAYV-AAKHGIMGLTKT 189

Query: 197 LAAELGRYGIRVDCV-----------------SHTYGLAMAEAIAS-------------- 225
           +A E+   G+ V+ +                 + T G+   + I                
Sbjct: 190 VALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITV 249

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             +A+ ALY     DD + +   ++ ++GG
Sbjct: 250 EQVASLALYLAG--DDAAQITGTHVSMDGG 277

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  143 bits (362), Expect = 7e-42
 Identities = 64/261 (24%), Positives = 103/261 (39%), Gaps = 47/261 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
            LQGR  ++TGG  GIG   A +F + GA V +A        A    L   G   V  + 
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQ 66

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVN 135
            DVS+  +   L    V +FG +D++  N+G             +       L  + AVN
Sbjct: 67  TDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAP-------LATMTPEQLNGIFAVN 119

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNI-PANYYGVSKFGILGL 193
             G F   +     ++    G ++ T+  TG      I G      ++ YG +K   LG 
Sbjct: 120 VNGTFYAVQACLDALIASGSGRVVLTSSITG-----PITG--YPGWSH-YGATKAAQLGF 171

Query: 194 VKSLAAELGRYGIRVDCV-------------SHTYGLAMAEAI--------ASIANAALY 232
           +++ A EL  + I V+ +                Y  +MA +I          I + A +
Sbjct: 172 MRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAF 231

Query: 233 NMAKDDDTSYVGKQNLLVNGG 253
            +A   +  Y+  Q + V+GG
Sbjct: 232 -LA-TKEAGYITGQAIAVDGG 250

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  142 bits (360), Expect = 8e-42
 Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 45/257 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
            +A++T      G +A +   ++G  VV  D         A++    +          E+
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASF---ADAAERQR-FESENPGTIALAEQ 57

Query: 87  EVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
           +   LVD T+     +D +V N          + +  T ++D+ ++    +I   L+ + 
Sbjct: 58  KPERLVDATLQHGEAIDTIVSNDYIPRPM-NRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAAELGR 203
           A   +       +++ T           G   +      YG ++   + LV+S A  L R
Sbjct: 117 AIAPLRAAGGASVIFITS--------SVGKKPLAYNPL-YGPARAATVALVESAAKTLSR 167

Query: 204 YGIRVDCV--------------SHTYGLAMAEAIAS------------IANAALYNMAKD 237
            GI +  +                     + E +              +     + +A  
Sbjct: 168 DGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITF-LA-S 225

Query: 238 DDTSYVGKQNLLVNGGF 254
              + +  Q     GG+
Sbjct: 226 RRAAPIVGQFFAFTGGY 242

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  143 bits (362), Expect = 1e-41
 Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ------------------ 64
           R++G+VA +TG A G G S A    + GA ++  D+   +                    
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67

Query: 65  -ALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILD 122
             L      + +     DV +   +   VD+ V + G+LDI+V N+G      G  ++  
Sbjct: 68  ADLVKGHNRR-IVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIG---NGGDTLDK 123

Query: 123 TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP-A 180
           T + D   ++ +N  G +   K     M+   R G I+ T+  G        GL   P  
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVG--------GLKAYPHT 175

Query: 181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
            +Y  +K G++GL+++   ELG++ IRV+ V
Sbjct: 176 GHYVAAKHGVVGLMRAFGVELGQHMIRVNSV 206

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  142 bits (360), Expect = 1e-41
 Identities = 56/266 (21%), Positives = 100/266 (37%), Gaps = 46/266 (17%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCY 77
           +  L+G+  +ITG + GIG + A+LF + GAKV +               +     D  +
Sbjct: 2   FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAF 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
              D++       LVD  VAKFG +D+L+N+   L  R    + +   +  + ++  N  
Sbjct: 62  FAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRK--PLPEIDDTFYDAVMDANIR 119

Query: 138 GGFLVAKHAARVMVPR-----RRGCILYTT----GTGTTACTEIEGLCNIPANYYGVSKF 188
              +  K A   +        +   ++ T      TG        G        YG +K 
Sbjct: 120 SVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP-----GAGL-----YGAAKA 169

Query: 189 GILGLVKSLAAELGRYGIRVDCVS---------HTYGLAMAEAIAS------------IA 227
            +  + K+      + G+R + VS               + + I++            +A
Sbjct: 170 FLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMA 229

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
            A L+  A    + Y+  Q L +NGG
Sbjct: 230 PAFLF-FASHLASGYITGQVLDINGG 254

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  141 bits (358), Expect = 1e-41
 Identities = 43/244 (17%), Positives = 85/244 (34%), Gaps = 27/244 (11%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           +     I+TG  SG+G +      + G +V +   +    Q     LG+  V  I  D++
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNA-VIGIVADLA 59

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  +V       V   G  +++++         F  +       + R++  N +   LVA
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLH---CAGTGEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELG 202
           +   R++   R G +     +                   Y  SK+G+ G ++SL AEL 
Sbjct: 117 QQTVRLIG-ERGGVLANVLSSA--------AQVGKANESLYCASKWGMRGFLESLRAELK 167

Query: 203 RYGIRVDCVS----------HTYGLAMAEAIA--SIANAALYNMAKDDDTSYVGKQNLLV 250
              +R+  +           +T  +  +  +     A   L  +       +V    +  
Sbjct: 168 DSPLRLVNLYPSGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDALEARSS-CHVTDLFIGR 226

Query: 251 NGGF 254
           N G 
Sbjct: 227 NEGH 230

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  142 bits (361), Expect = 1e-41
 Identities = 57/279 (20%), Positives = 98/279 (35%), Gaps = 59/279 (21%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-------- 74
           +L+GRVA ITG A G G + A      GA ++  D+   L   +       D        
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRL 67

Query: 75  -------VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD 127
                  +     D  +   +  +VD  VA  G+LDI+V    N       +  D    D
Sbjct: 68  VEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVA---NAGVAAPQAWDDITPED 124

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVS 186
              ++ +N  G +      A  ++   R G I+  +         ++    +    Y  S
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA-----GMKMQPFMIH--YTAS 177

Query: 187 KFGILGLVKSLAAELGRYGIRVDCV-----------------------SHTYGLAMAEAI 223
           K  + GL ++ AAELG++ IRV+ V                       ++     +    
Sbjct: 178 KHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPF 237

Query: 224 AS--------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                     IA+   + +A  D++  V    + V+ G 
Sbjct: 238 LPDWVAEPEDIADTVCW-LA-SDESRKVTAAQIPVDQGS 274

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  141 bits (359), Expect = 1e-41
 Identities = 58/266 (21%), Positives = 92/266 (34%), Gaps = 59/266 (22%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
              G+   +TG   GIG + A  F + GAKV   D           +  +     +  DV
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA-------FTQEQYPFATEV-MDV 55

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++  +V  +    +A+  +LD LVN           +     K D ++  AVN  G F +
Sbjct: 56  ADAAQVAQVCQRLLAETERLDALVN---AAGILRMGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 143 AKHAARVMVPRRRGCILYTT----GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            +        +R G I+        T         G+       YG SK  +  L  S+ 
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRI------GMSA-----YGASKAALKSLALSVG 161

Query: 199 AELGRYGIRVDCVS-------------------HTYGLAMAEAIAS------------IA 227
            EL   G+R + VS                           E                IA
Sbjct: 162 LELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIA 221

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
           N  L+ +A  D  S++  Q+++V+GG
Sbjct: 222 NTILF-LA-SDLASHITLQDIVVDGG 245

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  141 bits (357), Expect = 2e-41
 Identities = 59/263 (22%), Positives = 92/263 (34%), Gaps = 47/263 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSN 84
           +VA++TG   GIG + A    K+G  V IAD  D   +A+A ++         +  DVS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
             +V   V+      G  D++VN   N        I       ++++  +N  G     +
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVN---NAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ 119

Query: 145 HAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
            A          G I+               L       Y  SKF + GL ++ A +L  
Sbjct: 120 AAVEAFKKEGHGGKIINACSQ--AGHVGNPELAV-----YSSSKFAVRGLTQTAARDLAP 172

Query: 204 YGIRVDCV---------------------SHTYGLAMAEAIASI-----------ANAAL 231
            GI V+                           G   AE    I           A    
Sbjct: 173 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 232

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +A   D+ Y+  Q+LL++GG 
Sbjct: 233 Y-LA-SPDSDYMTGQSLLIDGGM 253

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  141 bits (358), Expect = 3e-41
 Identities = 55/258 (21%), Positives = 97/258 (37%), Gaps = 32/258 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIH 79
               +  I+TGG  GIG +  +     GA V +          + +K+G +         
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CDVSN   V   +    A  G +  L+ N+G ++         +    D   +  VN  G
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV----KPATELTHEDFAFVYDVNVFG 126

Query: 139 GFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
            F   +  A++ + +++ G I+ T+   +    +     ++   +Y  SK     LVK L
Sbjct: 127 VFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGL 186

Query: 198 AAELGRYGIRVDCVSHTY---------GLAMAEAIAS------------IANAALYNMAK 236
           AAE    GIRV+ +S  Y            + +  AS            +   A+  +  
Sbjct: 187 AAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAIL-LL- 244

Query: 237 DDDTSYVGKQNLLVNGGF 254
            D  +Y+      ++GG 
Sbjct: 245 SDHATYMTGGEYFIDGGQ 262

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  141 bits (359), Expect = 3e-41
 Identities = 61/281 (21%), Positives = 101/281 (35%), Gaps = 64/281 (22%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-------- 74
            LQGRVA ITG A G G S A      GA ++  D+   +  ++       +        
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 75  -------VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD 127
                        DV ++  +  LV   + +FG+LD++V    N     +  + +     
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVA---NAGVLSWGRVWELTDEQ 128

Query: 128 LERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP--ANYYG 184
            + ++ VN  G +   +     M+     G I+  + +         GL   P   + Y 
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA--------GLKATPGNGH-YS 179

Query: 185 VSKFGILGLVKSLAAELGRYGIRVDCVSH--------TYGLAMAEAIAS----------- 225
            SK G+  L  +LA ELG YGIRV+ + H            AM E  A            
Sbjct: 180 ASKHGLTALTNTLAIELGEYGIRVNSI-HPYSVETPMIEPEAMMEIFARHPSFVHSFPPM 238

Query: 226 ------------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                       +A+   + +A  D +  +    + V+ G 
Sbjct: 239 PVQPNGFMTADEVADVVAW-LA-GDGSGTLTGTQIPVDKGA 277

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  140 bits (356), Expect = 4e-41
 Identities = 59/267 (22%), Positives = 105/267 (39%), Gaps = 51/267 (19%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA-----DKLGHQDVCYIHC 80
            +VA++TGGA GIG   ++    +G  + +AD+     QA       +    +   ++  
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQK-AVFVGL 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV+++    + +D    K G  D+LVN   N        +L+  + DL+++ +VN    F
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVN---NAGIAQIKPLLEVTEEDLKQIYSVNVFSVF 117

Query: 141 LVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
              + A+R        G I+        +   I+G      + Y  +KF + GL ++ A 
Sbjct: 118 FGIQAASRKFDELGVKGKII-----NAASIAAIQG--FPILSAYSTTKFAVRGLTQAAAQ 170

Query: 200 ELGRYGIRVDCV---------------------SHTYGLAMAEAIASI-----------A 227
           EL   G  V+                           G    E  +SI           A
Sbjct: 171 ELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVA 230

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGGF 254
               + +A  ++++YV  Q +LV+GG 
Sbjct: 231 GLVSF-LA-SENSNYVTGQVMLVDGGM 255

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  139 bits (354), Expect = 8e-41
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 44/260 (16%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
           ++ +V IITGG+SG+G   A  F K GA+VVI        +    ++      +  +  D
Sbjct: 4   MKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD 63

Query: 82  VSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVS-ILDTPKSDLERLLAVNTIGG 139
           V N  ++  +++    KFG++DIL+N +  N     F+    D   +    ++ +   G 
Sbjct: 64  VRNTDDIQKMIEQIDEKFGRIDILINNAAGN-----FICPAEDLSVNGWNSVINIVLNGT 118

Query: 140 FLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
           F  ++   +  + +   G I+    T        +        +   +K G+L + K+LA
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINMVAT-----YAWDA--GPGVIHSAAAKAGVLAMTKTLA 171

Query: 199 AELG-RYGIRVDCVS--------HTYGLAMAEAIAS----------------IANAALYN 233
            E G +YGIRV+ ++            L ++E +A                 IA  A Y 
Sbjct: 172 VEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYL 231

Query: 234 MAKDDDTSYVGKQNLLVNGG 253
            +  D+ +Y+    + ++GG
Sbjct: 232 CS--DEAAYINGTCMTMDGG 249

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  140 bits (356), Expect = 1e-40
 Identities = 43/209 (20%), Positives = 72/209 (34%), Gaps = 29/209 (13%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---------------ALA 67
           R+Q +V ++TGGA G G S A    + GA +++ D+  ++                    
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSI-LDTPKS 126
           +K G +       DV +   V   +   VA+FGKLD++V +       G   +    P  
Sbjct: 67  EKTGRK-AYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANA------GICPLGAHLPVQ 119

Query: 127 DLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT----GTTACTEIEGLCNIPANY 182
                  V+ +G       A   +       I+ T                G        
Sbjct: 120 AFADAFDVDFVGVINTVHAALPYLT--SGASIITTGSVAGLIAAAQPPGAGGPQGPGGAG 177

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           Y  +K  +      LAA+L    IR + +
Sbjct: 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVI 206

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  139 bits (354), Expect = 1e-40
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALAD--KLGHQDVCYIH 79
            L+G  A++TGG+ GIG    +     GA V      Q  L   L      G + V    
Sbjct: 6   NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFK-VEASV 64

Query: 80  CDVSNEREVINLVDTTVAKF-GKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           CD+S+  E   L++T    F GKL+ILVN +G  +    +    D    D   ++++N  
Sbjct: 65  CDLSSRSERQELMNTVANHFHGKLNILVNNAGIVI----YKEAKDYTVEDYSLIMSINFE 120

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
             + ++  A   +    RG +++ +            +       YG +K  +  L + L
Sbjct: 121 AAYHLSVLAHPFLKASERGNVVFISSVSG-----ALAVPYEAV--YGATKGAMDQLTRCL 173

Query: 198 AAELGRYGIRVDCV 211
           A E  +  IRV+ V
Sbjct: 174 AFEWAKDNIRVNGV 187

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  139 bits (352), Expect = 2e-40
 Identities = 54/242 (22%), Positives = 96/242 (39%), Gaps = 38/242 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            L G+VA++TG + GIGA+ A+     GA+VV+        +A+  ++     +     C
Sbjct: 26  SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHAC 85

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           D+S+   +       +A  G+ D+LV N+G          +     ++ + L+AVN    
Sbjct: 86  DLSHSDAIAAFATGVLAAHGRCDVLVNNAGVG---WFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
           +L+ +  A  M+  +RG I+  +           G   +   A Y   SK+G+ GL+ S 
Sbjct: 143 YLLLRAFAPAMIAAKRGHIINISSLA--------GKNPVADGAAYTA-SKWGLNGLMTSA 193

Query: 198 AAELGRYGIRVDCVS----HTYGLAMAEAI------------ASIANAALYNMAKDDDTS 241
           A EL ++ +RV  V+     T        +              IA+             
Sbjct: 194 AEELRQHQVRVSLVAPGSVRT---EFGVGLSAKKSALGAIEPDDIADVVAL--LATQADQ 248

Query: 242 YV 243
             
Sbjct: 249 SF 250

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  139 bits (352), Expect = 2e-40
 Identities = 59/278 (21%), Positives = 105/278 (37%), Gaps = 68/278 (24%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI---------------ADVQDN 61
           +L+ Y+ L+ +V +I GG   +GA  A+ F      +V+                +++D 
Sbjct: 2   SLTKYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ 61

Query: 62  LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSI 120
             +                D+SNE EV  L D    +FGK+DI +N+ G  L       I
Sbjct: 62  GAKVAL----------YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL----KKPI 107

Query: 121 LDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA 180
           ++T +++ + +  +N    +   K AA+ M     G I+ T  T   A            
Sbjct: 108 VETSEAEFDAMDTINNKVAYFFIKQAAKHM--NPNGHII-TIATSLLAAY--------TG 156

Query: 181 NY--YGVSKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGLAMAEAIAS------ 225
            Y  Y  +K  +    ++ + EL +  I V+ ++         YG    E+ A       
Sbjct: 157 FYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAM 216

Query: 226 ---------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                    IA    + +    D  ++  Q +  NGG+
Sbjct: 217 GNQLTKIEDIAPIIKF-LT--TDGWWINGQTIFANGGY 251

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  138 bits (351), Expect = 2e-40
 Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 14/190 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L+G+ A++TG  SGIG   AQ+  + GA +V+    D                +   D+S
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  ++  L      +FG +DILVN   N   +    +   P    ++++A+N    F   
Sbjct: 62  DVAQIEALFALAEREFGGVDILVN---NAGIQHVAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSLAAEL 201
           + A   M  R  G I+            + GL      A Y   +K G++GL K +  E 
Sbjct: 119 RLALPGMRARNWGRIIN--------IASVHGLVGSTGKAAYVA-AKHGVVGLTKVVGLET 169

Query: 202 GRYGIRVDCV 211
               +  + +
Sbjct: 170 ATSNVTCNAI 179

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  140 bits (354), Expect = 2e-40
 Identities = 63/261 (24%), Positives = 103/261 (39%), Gaps = 47/261 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
            L  R  ++TGG  GIG   A +F + GA V +A        ++  +L   G  +V  + 
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVR 97

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVN 135
            DVS+     +   T V  FG LD++  N+G             +       L  +L VN
Sbjct: 98  LDVSDPGSCADAARTVVDAFGALDVVCANAGIFPEAR-------LDTMTPEQLSEVLDVN 150

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNI-PANYYGVSKFGILGL 193
             G     +     +    RG ++ T+  TG      + G      ++ YG SK   LG 
Sbjct: 151 VKGTVYTVQACLAPLTASGRGRVILTSSITG-----PVTG--YPGWSH-YGASKAAQLGF 202

Query: 194 VKSLAAELGRYGIRVDCV-------------SHTYGLAMAEAI--------ASIANAALY 232
           +++ A EL   G+ V+ +                Y   MA +I          I + A +
Sbjct: 203 MRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAF 262

Query: 233 NMAKDDDTSYVGKQNLLVNGG 253
            +A  D+  Y+  Q ++V+GG
Sbjct: 263 -LA-TDEAGYITGQAIVVDGG 281

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  140 bits (354), Expect = 2e-40
 Identities = 60/271 (22%), Positives = 103/271 (38%), Gaps = 66/271 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA----DVQDNLGQALADKLGHQDVCYIH 79
            QG+VA ITGG +G+G     L    GA+ VIA    DV     + ++ + G++ V  I 
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNK-VHAIQ 82

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVS-ILDTPKSDLERLLAVNTI 137
           CDV +   V N V   +   G  +I++N +  N     F+S       +  + +  +   
Sbjct: 83  CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-----FISPTERLSPNAWKTITDIVLN 137

Query: 138 GGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANY----------YGVS 186
           G   V     + ++  ++    L                 +I   Y             +
Sbjct: 138 GTAFVTLEIGKQLIKAQKGAAFL-----------------SITTIYAETGSGFVVPSASA 180

Query: 187 KFGILGLVKSLAAELGRYGIRVDCV----------------SHTYGLAMAEAIAS----- 225
           K G+  + KSLAAE G+YG+R + +                + T+   M   I       
Sbjct: 181 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGT 240

Query: 226 ---IANAALYNMAKDDDTSYVGKQNLLVNGG 253
              +AN A +  +  D  S++    +  +GG
Sbjct: 241 VEELANLAAFLCS--DYASWINGAVIKFDGG 269

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  139 bits (353), Expect = 3e-40
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 32/208 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---------------ALA 67
           +++G+VA ITG A G G S A    + GA ++  DV   L                    
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKS 126
           + LG + +     DV +   +   VD  V + G+LDI++ N+           +      
Sbjct: 85  EALGRR-IIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALA---SEGTRLNRMDPK 140

Query: 127 DLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP--ANYY 183
               ++ VN  G ++ A+ A   ++  +R G I++T+  G        GL       N Y
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG--------GLRGAENIGN-Y 191

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCV 211
             SK G+ GL++++A ELG   IRV+ V
Sbjct: 192 IASKHGLHGLMRTMALELGPRNIRVNIV 219

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  138 bits (350), Expect = 5e-40
 Identities = 55/282 (19%), Positives = 102/282 (36%), Gaps = 66/282 (23%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---------------ALA 67
            L G+VA ITG A G G + A     +GA ++  D+ D +                  L 
Sbjct: 10  PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLV 69

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKS 126
           + +G + +     DV +   +   +   + + G+LDI+V N+G        ++ +     
Sbjct: 70  EDIGSR-IVARQADVRDRESLSAALQAGLDELGRLDIVVANAG--------IAPMSAGDD 120

Query: 127 DLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANY--Y 183
               ++ VN  G +   K A   +V +   G I+  + +       + G+ +       Y
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG-----LAGVGSADPGSVGY 175

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCV--------------------SHTYGLAMAEAI 223
             +K G++GL++  A  L    IRV+ +                              A+
Sbjct: 176 VAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAM 235

Query: 224 AS-----------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
            +           +ANA  + +   D   Y+    L V+ GF
Sbjct: 236 GNAMPVEVLAPEDVANAVAW-LV-SDQARYITGVTLPVDAGF 275

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  137 bits (347), Expect = 6e-40
 Identities = 61/261 (23%), Positives = 100/261 (38%), Gaps = 50/261 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+ A++TG A GIG + A     +GA V+++D+     +A A  +G +       D+
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAI-AADI 61

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIG 138
           S+   V  L     A  G +DILV N+                D       +++ VN  G
Sbjct: 62  SDPGSVKALFAEIQALTGGIDILVNNASIVPFVA-------WDDVDLDHWRKIIDVNLTG 114

Query: 139 GFLVAKHAARVMVPRRR-GCILYTT---GTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
            F+V +     M    + G ++          T       +       Y  +K G++G  
Sbjct: 115 TFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTP-----NMAA-----YVAAKGGVIGFT 164

Query: 195 KSLAAELGRYGIRVDCV-------------SHTYGLAMAEAIA---------SIANAALY 232
           ++LA ELG+Y I  + V              H       E +           IA+   +
Sbjct: 165 RALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSF 224

Query: 233 NMAKDDDTSYVGKQNLLVNGG 253
            +A  DD  ++  Q L V+ G
Sbjct: 225 -LA-SDDARWITGQTLNVDAG 243

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  137 bits (348), Expect = 9e-40
 Identities = 46/208 (22%), Positives = 91/208 (43%), Gaps = 16/208 (7%)

Query: 7   SLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL 66
            L  +N    +++  + L GR A++TG  SGIG + A  + + GA V+     D + +  
Sbjct: 12  DLGTENLYFQSMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVA 71

Query: 67  AD--KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDT 123
            +    G      +  D+++     N+ +  +A   ++D+LVN+ G     R      + 
Sbjct: 72  DEIADGGGS-AEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGIIA--RA--PAEEV 125

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY 183
                  +L VN    +++++     M+    G I+      +      +G  N+ A  Y
Sbjct: 126 SLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLS-----FQGGRNVAA--Y 178

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCV 211
             SK  ++GL ++LA+E    G+ V+ +
Sbjct: 179 AASKHAVVGLTRALASEWAGRGVGVNAL 206

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  136 bits (345), Expect = 1e-39
 Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 47/257 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+ +  +ITG A GIG +  +LF K GA++V  D+++   +  A+ +G      +  DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG---AHPVVMDV 58

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIG 138
           ++   V       +A  G+LD +V  +G    N            P  D E +L VN  G
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVHYAGITRDNF-------HWKMPLEDWELVLRVNLTG 111

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI-PANYYGVSKFGILGLVKSL 197
            FLVAK A+  M  +  G I+ T             L N+  ANY   S  G++GL ++L
Sbjct: 112 SFLVAKAASEAMREKNPGSIVLTA--------SRVYLGNLGQANY-AASMAGVVGLTRTL 162

Query: 198 AAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIANAALYNMAK 236
           A ELGR+GIRV+ ++        T  +          A           +A AAL+ +  
Sbjct: 163 ALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALF-LL- 220

Query: 237 DDDTSYVGKQNLLVNGG 253
            D++S++  Q L V+GG
Sbjct: 221 SDESSFITGQVLFVDGG 237

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  136 bits (346), Expect = 1e-39
 Identities = 63/270 (23%), Positives = 98/270 (36%), Gaps = 55/270 (20%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-----NLGQALADKLGHQDVCYI 78
           L+G+VA++TG  SGIG   A      GA +V+    D      +   LA + G + V Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYD 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D+S    V  LVD  V + G++DILVN   N   +    I D P    + +LA+N   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVN---NAGIQHTALIEDFPTEKWDAILALNLSA 117

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKS 196
            F     A   M  +  G I+              GL      + Y   +K G++G  K 
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINI--------ASAHGLVASANKSAYV-AAKHGVVGFTKV 168

Query: 197 LAAELGRYGIRVDCV-----------------SHTYGLAMAEAIAS-------------- 225
            A E    GI  + +                 +   G+    A                 
Sbjct: 169 TALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTP 228

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             +   A++  +  D  + +    + V+GG
Sbjct: 229 EQLGGTAVFLAS--DAAAQITGTTVSVDGG 256

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  136 bits (345), Expect = 3e-39
 Identities = 64/264 (24%), Positives = 105/264 (39%), Gaps = 48/264 (18%)

Query: 23  RLQGRVAIITG--GASGIGASAAQLFHKNGAKVVIADVQ-----DNLGQALADKLGHQDV 75
            L+G+V ++TG  G  G+G  AA+   + GA V I         +   + L    G +  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAV 134
            Y  C V +      LV   VA FG++D  + N+G   +      ILD        ++ V
Sbjct: 77  AY-KCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD----SGILDGSVEAWNHVVQV 131

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNIPAN--YYGVSKFGIL 191
           +  G F  AK        R  G ++ T   +G  A        N P     Y V+K G +
Sbjct: 132 DLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIA--------NFPQEQTSYNVAKAGCI 183

Query: 192 GLVKSLAAELGRYGIRVDCVSHTY-GLAMAEAIAS--------------------IANAA 230
            + +SLA E   +  RV+ +S  Y    +++ +                      +  A 
Sbjct: 184 HMARSLANEWRDF-ARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGAY 242

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           +Y  A  D ++Y    +LL++GG+
Sbjct: 243 VY-FA-SDASTYTTGADLLIDGGY 264

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  135 bits (343), Expect = 3e-39
 Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 60/261 (22%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L     +ITG +  +G   A    ++G +V+I+   +    A   +L       ++ D 
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALYGDF 80

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           S E  ++  +D    +   L  +V++    L              +  R+ +V+ +  +L
Sbjct: 81  SCETGIMAFIDLLKTQTSSLRAVVHNASEWLA-----ETPGEEADNFTRMFSVHMLAPYL 135

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI--------PANY--YGVSKFGIL 191
           +  H   ++       I+                 +I         + +  Y  +K G+ 
Sbjct: 136 INLHCEPLLTASEVADIV-----------------HISDDVTRKGSSKHIAYCATKAGLE 178

Query: 192 GLVKSLAAELGRYGIRVDCV-------SHTYGLAMAEAIAS------------IANAALY 232
            L  S AA      ++V+ +             A      +            I  +  Y
Sbjct: 179 SLTLSFAARFAP-LVKVNGIAPALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRY 237

Query: 233 NMAKDDDTSYVGKQNLLVNGG 253
            +    D++YV    L VNGG
Sbjct: 238 -LL---DSTYVTGTTLTVNGG 254

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  135 bits (343), Expect = 4e-39
 Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 15/198 (7%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DV 75
           +++ + L G+ A++TG A G+G + A+     GA+V++ D++  L     D L  +  D 
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA 60

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAV 134
             +  DV++E  +        A+   +DIL+N +G     R    +++    + ++++  
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQY--RK--PMVELELENWQKVIDT 116

Query: 135 NTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGL 193
           N    FLV++ AA+ M+ R   G I+      +           +    Y  +K GI  L
Sbjct: 117 NLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS-----QAARPTVAP--YTAAKGGIKML 169

Query: 194 VKSLAAELGRYGIRVDCV 211
             S+AAE  ++ I+ + +
Sbjct: 170 TCSMAAEWAQFNIQTNAI 187

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  135 bits (343), Expect = 4e-39
 Identities = 55/262 (20%), Positives = 95/262 (36%), Gaps = 47/262 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
            L+ +  ++TGG  GIG +  + F   GA +      +        K   +   V    C
Sbjct: 11  SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVC 70

Query: 81  DVSNEREVINLVDTTVAKFG-KLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           D S   E   L+ T  + FG KLDIL+ N G           LD    D    ++ N   
Sbjct: 71  DASLRPEREKLMQTVSSMFGGKLDILINNLGAIR----SKPTLDYTAEDFSFHISTNLES 126

Query: 139 GFLVAKHAARVMVPRRRGCILYTTG-TGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
            + +++ A  ++     G I++ +   G  +              Y  +K  +  L ++L
Sbjct: 127 AYHLSQLAHPLLKASGCGNIIFMSSIAGVVS---ASVGSI-----YSATKGALNQLARNL 178

Query: 198 AAELGRYGIRVDCVS----HTYGLAMAEAIAS---------------------IANAALY 232
           A E    GIR + V+     T    +AEA+                       +++   +
Sbjct: 179 ACEWASDGIRANAVAPAVIAT---PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAF 235

Query: 233 NMAKDDDTSYVGKQNLLVNGGF 254
            +      SY+  Q + V+GG 
Sbjct: 236 -LC-MPAASYITGQTICVDGGL 255

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  135 bits (342), Expect = 7e-39
 Identities = 65/202 (32%), Positives = 95/202 (47%), Gaps = 22/202 (10%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---D 74
           +   + L+GRVA++TGG+ G+G   AQ   + G  VV+A          A KL  +   +
Sbjct: 13  MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVE 72

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLA 133
                CDVSN  EV  L++    KFGKLD +VN +G N   R      + P  +  +++ 
Sbjct: 73  TMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINR--RH--PAEEFPLDEFRQVIE 128

Query: 134 VNTIGGFLVAKHAARVMVPRRRGCIL----YTTGTGTTACTEIEGLCNIPANYYGVSKFG 189
           VN  G + V + A  ++       I+     T             + NI A  Y  SK G
Sbjct: 129 VNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV--------TMPNISA--YAASKGG 178

Query: 190 ILGLVKSLAAELGRYGIRVDCV 211
           +  L K+LA E GRYGIRV+ +
Sbjct: 179 VASLTKALAKEWGRYGIRVNVI 200

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  135 bits (341), Expect = 7e-39
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 21/198 (10%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            ++  VA++TGGASG+G +  +     GA+VV+ D++   G+ +   LG     +   DV
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIR---GEDVVADLG-DRARFAAADV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           ++E  V + +D      G L I+VN  G     R          +   +++ +N +G F 
Sbjct: 62  TDEAAVASALD-LAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFN 120

Query: 142 VAKHAARVMV--------PRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGL 193
           V + AA  +            RG I+ T           +G   I    Y  SK G++G+
Sbjct: 121 VLRLAAERIAKTEPVGPNAEERGVIINTASV-----AAFDG--QIGQAAYSASKGGVVGM 173

Query: 194 VKSLAAELGRYGIRVDCV 211
              +A +L  + IRV  +
Sbjct: 174 TLPIARDLASHRIRVMTI 191

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  134 bits (340), Expect = 7e-39
 Identities = 47/197 (23%), Positives = 82/197 (41%), Gaps = 20/197 (10%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-----GHQDVCY 77
             Q  +AIITG + GIGA  A     +G +VV+        + + D++       Q+   
Sbjct: 4   EKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIV 63

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  D+++  +    +     K+G +DILVN+    ++       L  P  +  +++ +N 
Sbjct: 64  LPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD-----GSLSEPVDNFRKIMEINV 118

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVK 195
           I  + + K    +M  ++ G I                         YG +KF +LGL +
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRA--------AKYGFADGGIYGSTKFALLGLAE 170

Query: 196 SLAAELGRYGIRVDCVS 212
           SL  EL   GIRV  + 
Sbjct: 171 SLYRELAPLGIRVTTLC 187

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  135 bits (343), Expect = 9e-39
 Identities = 63/263 (23%), Positives = 104/263 (39%), Gaps = 50/263 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-----LADKLGHQDVCY 77
           RL+ R A++TGG SGIG +AA  + + GA V I  +      A     L ++ G + V  
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVL- 104

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  D+S+E    +LV       G LDIL   +G   +      I D      ++  AVN 
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDILALVAG---KQTAIPEIKDLTSEQFQQTFAVNV 161

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY--YGVSKFGILGLV 194
              F + + A  ++   +   I+      T++    +       +   Y  +K  IL   
Sbjct: 162 FALFWITQEAIPLL--PKGASII-----TTSSIQAYQP----SPHLLDYAATKAAILNYS 210

Query: 195 KSLAAELGRYGIRVDCV---------SHTYGLAMAEAIAS---------------IANAA 230
           + LA ++   GIRV+ V           + G    + I                 +A   
Sbjct: 211 RGLAKQVAEKGIRVNIVAPGPIWTALQISGGQT-QDKIPQFGQQTPMKRAGQPAELAPVY 269

Query: 231 LYNMAKDDDTSYVGKQNLLVNGG 253
           +Y +A   ++SYV  +   V GG
Sbjct: 270 VY-LA-SQESSYVTAEVHGVCGG 290

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  134 bits (340), Expect = 9e-39
 Identities = 45/262 (17%), Positives = 84/262 (32%), Gaps = 50/262 (19%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCDVS 83
           G+V ++TG + GIG S   +        V+  V  +    + L +K G +   Y+  D++
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDR-FFYVVGDIT 60

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +  +  LV+  V   GK+D LV N+G         ++ +   +  ++L  +N      +
Sbjct: 61  EDSVLKQLVNAAVKGHGKIDSLVANAGVL---EPVQNVNEIDVNAWKKLYDINFFSIVSL 117

Query: 143 AKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
              A   +  +  G +++ +                     YG SK  +     +LA E 
Sbjct: 118 VGIALPELK-KTNGNVVFVSSDACNMY---FSSWGA-----YGSSKAALNHFAMTLANEE 168

Query: 202 GRYGIRVDCVS---------------HTYGLAMAEAIAS---------------IANAAL 231
               ++   V+                      AE +                  A    
Sbjct: 169 --RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYA 226

Query: 232 YNMAKDDDTSYVGKQNLLVNGG 253
             +A       V  Q L  N  
Sbjct: 227 K-LALHGIPDGVNGQYLSYNDP 247

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  134 bits (340), Expect = 1e-38
 Identities = 55/198 (27%), Positives = 85/198 (42%), Gaps = 17/198 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIH 79
            + G+V ++TG + GIG   A    K GA V I     +  + +A     LG Q V  + 
Sbjct: 2   PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVP-VV 60

Query: 80  CDVSNEREVINLVDTTVA-KFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAV 134
           CD S E EV +L +     + G+LD+LVN        +      +  +TP S  + +  V
Sbjct: 61  CDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNV 120

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
              G +  + + AR+MVP  +G I+  +  G         L  +    YGV K     L 
Sbjct: 121 GLRGHYFCSVYGARLMVPAGQGLIVVISSPG--------SLQYMFNVPYGVGKAACDKLA 172

Query: 195 KSLAAELGRYGIRVDCVS 212
              A EL R+G+    + 
Sbjct: 173 ADCAHELRRHGVSCVSLW 190

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  133 bits (337), Expect = 3e-38
 Identities = 51/257 (19%), Positives = 96/257 (37%), Gaps = 40/257 (15%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALAD---KLGHQDVCYIH 79
            Q + A++TG + G+G +AA    +NG  +VI   +        A+   KLG + +    
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV-K 60

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            +V    ++  +       FG+LD+ VN   N        +++  ++  +  + +N    
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVN---NAASGVLRPVMELEETHWDWTMNINAKAL 117

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
              A+ AA++M     G I+  +  G+     +E          GVSK  +  L + LA 
Sbjct: 118 LFCAQEAAKLMEKNGGGHIVSISSLGSI--RYLENYTT-----VGVSKAALEALTRYLAV 170

Query: 200 ELGRYGIRVDCVS-------HTYGLAMAEAIAS----------------IANAALYNMAK 236
           EL    I V+ VS               E +                  + +   + +  
Sbjct: 171 ELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEF-LV- 228

Query: 237 DDDTSYVGKQNLLVNGG 253
                 +  Q ++V+GG
Sbjct: 229 SSKADMIRGQTIIVDGG 245

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  133 bits (338), Expect = 3e-38
 Identities = 57/261 (21%), Positives = 93/261 (35%), Gaps = 40/261 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLGHQ--DVCYIH 79
           +    VAI+TGG  GIG   A+    +G  + I  + D  G   +  +L      V ++ 
Sbjct: 26  QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLR 85

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            D+++       VD  VA+FG++D LVN+ G     R     LD    + + ++ VN  G
Sbjct: 86  ADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRD--DFLDLKPENFDTIVGVNLRG 143

Query: 139 GFLVAKHAARVMV---PRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
                +   + M+    R    I+    T  +A        +     Y +SK G+    +
Sbjct: 144 TVFFTQAVLKAMLASDARASRSII--NITSVSAVMTSPERLD-----YCMSKAGLAAFSQ 196

Query: 196 SLAAELGRYGIRVDCV-------------SHTYGLAMAEAI---------ASIANAALYN 233
            LA  L   GI V  V             S  Y   +   +           I N     
Sbjct: 197 GLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAG- 255

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
           +A      +     +  +GG 
Sbjct: 256 LA-GGQFGFATGSVIQADGGL 275

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  133 bits (337), Expect = 3e-38
 Identities = 61/257 (23%), Positives = 92/257 (35%), Gaps = 40/257 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALAD---KLGHQDVCYI 78
           R   R  ++ G    IG + A  F + GA VV+       G         KLG   +  I
Sbjct: 5   RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALA-I 63

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D++N  EV   +     KFG++  LV+    L  R   +I +  ++   ++L VN   
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARK--TIAEMDEAFWHQVLDVNLTS 121

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            FL AK A   M   + G I+ T  +         G        Y  SK  ++   + LA
Sbjct: 122 LFLTAKTALPKM--AKGGAIV-TFSSQAGRDGGGPGALA-----YATSKGAVMTFTRGLA 173

Query: 199 AELGRYGIRVDCVS-------HTYGLAMAEAIAS---------------IANAALYNMAK 236
            E+G   IRV+ V                E                   +A    +  + 
Sbjct: 174 KEVGP-KIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLAS- 231

Query: 237 DDDTSYVGKQNLLVNGG 253
            DD +YV      +NGG
Sbjct: 232 -DDAAYVTGACYDINGG 247

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  134 bits (340), Expect = 5e-38
 Identities = 54/230 (23%), Positives = 90/230 (39%), Gaps = 38/230 (16%)

Query: 2   VFKCLSLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD---- 57
           +      +        L +  RL G    ITG + GIG + A    K+GA +VIA     
Sbjct: 21  MASMTGGQQMGRGSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQ 80

Query: 58  ---------------VQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL 102
                          ++   G+AL              DV +E+++   V+  + KFG +
Sbjct: 81  PHPKLLGTIYTAAEEIEAVGGKALP----------CIVDVRDEQQISAAVEKAIKKFGGI 130

Query: 103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT 162
           DILVN   N       + LDTP   L+ ++ VNT G +L +K     +   +   IL  +
Sbjct: 131 DILVN---NASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNIS 187

Query: 163 GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
                    +  +       Y ++K+G+   V  +A E  +  I V+ + 
Sbjct: 188 PP-----LNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF-KGEIAVNALW 231

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  131 bits (333), Expect = 9e-38
 Identities = 49/259 (18%), Positives = 82/259 (31%), Gaps = 48/259 (18%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
             AI+T      G  +A    + G  V   D          D+L      Y      +E+
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHD----ESFKQKDELEAFAETYPQLKPMSEQ 57

Query: 87  EVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
           E   L++   + +G++D+LV N         F  I      D    +    I  F +   
Sbjct: 58  EPAELIEAVTSAYGQVDVLVSNDIFA---PEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 146 AARVMVPRRRGCILYTTG-TGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
            A  M  R+ G I++ T  T        + L       Y  ++ G   L  +L+ ELG Y
Sbjct: 115 VASQMKKRKSGHIIFITSATPFGP---WKELST-----YTSARAGACTLANALSKELGEY 166

Query: 205 GIRVDCV---------------------SHTYGLAMAEAIAS--------IANAALYNMA 235
            I V  +                     +  +   + +  A         +     + +A
Sbjct: 167 NIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAF-LA 225

Query: 236 KDDDTSYVGKQNLLVNGGF 254
                 Y+  Q   + GGF
Sbjct: 226 -SGSCDYLTGQVFWLAGGF 243

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  131 bits (331), Expect = 2e-37
 Identities = 65/279 (23%), Positives = 107/279 (38%), Gaps = 71/279 (25%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALADK 69
           RL G+VA++TG   GIGA+ A    + GAKVV+             ++++     A+A  
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIA-- 72

Query: 70  LGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDL 128
                   I  D+    E++ L D  VA FG LDI V NSG       F  + D  + + 
Sbjct: 73  --------IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS----FGHLKDVTEEEF 120

Query: 129 ERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKF 188
           +R+ ++NT G F VA+ A R +     G I+  T + T+    +          Y  SK 
Sbjct: 121 DRVFSLNTRGQFFVAREAYRHL--TEGGRIV-LTSSNTSKDFSVPKHSL-----YSGSKG 172

Query: 189 GILGLVKSLAAELGRYGIRVDCV---------------------SHTYGLAMAEAIAS-- 225
            +   V+  + + G   I V+ V                     +        +  A   
Sbjct: 173 AVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS 232

Query: 226 ----------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                     +AN   + +    +  +V  + L ++GG 
Sbjct: 233 PLHRNGWPQDVANVVGF-LV-SKEGEWVNGKVLTLDGGA 269

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  130 bits (329), Expect = 5e-37
 Identities = 67/270 (24%), Positives = 103/270 (38%), Gaps = 62/270 (22%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALADKL 70
               V ++TGG+ GIGA+  +L  + G +V +             A + ++ G+A+A   
Sbjct: 24  SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVA--- 80

Query: 71  GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLE 129
                  I  DV N  ++  +      +FG+LD LVN +G          + +     +E
Sbjct: 81  -------IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG---IVDYPQRVDEMSVERIE 130

Query: 130 RLLAVNTIGGFLVAKHAARVMVPRRRGC----ILYTTGTGTTACTEIEGLCNIPANYYGV 185
           R+L VN  G  L A  A R M     G     +  ++           G      +Y   
Sbjct: 131 RMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL------GSATQYVDYAA- 183

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS---------HTYGLA-MAEAIAS---------- 225
           SK  I      LA E+   GIRV+ V           + GL   A  +A           
Sbjct: 184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMP 243

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             +A+A LY ++     SYV    L V+GG
Sbjct: 244 EEVADAILYLLS--PSASYVTGSILNVSGG 271

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  129 bits (327), Expect = 6e-37
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 19/191 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
             + R  ++ GG   +G+   Q F      V   DV +N   + +  +   D        
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTD------SF 57

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + + + +      +    K+D ++       + G  +   +   + + +   +     + 
Sbjct: 58  TEQADQVTAEVGKLLGDQKVDAILC--VAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           +  A + +  +  G +         A   ++G   +    YG++K  +  L +SLA +  
Sbjct: 116 SHLATKHL--KEGGLLTL-----AGAKAALDGTPGMIG--YGMAKGAVHQLCQSLAGKNS 166

Query: 203 --RYGIRVDCV 211
               G     V
Sbjct: 167 GMPSGAAAIAV 177

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  129 bits (327), Expect = 7e-37
 Identities = 39/199 (19%), Positives = 59/199 (29%), Gaps = 31/199 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQA--LADKLGHQDVCYIH 79
            L  +  I      GIG   ++   K   K   I D  +N      L       ++ +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 80  CDVSNEREVI-NLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTI 137
            DV+        L+     +   +DIL+N  G          ILD     +ER +A+N  
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAG----------ILDD--HQIERTIAINFT 109

Query: 138 GGFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILG 192
           G              R     G I             + G   I     Y   SK  ++ 
Sbjct: 110 GLVNTTTAILDFWDKRKGGPGGIIANI--------CSVTGFNAIHQVPVYSA-SKAAVVS 160

Query: 193 LVKSLAAELGRYGIRVDCV 211
              SLA      G+    +
Sbjct: 161 FTNSLAKLAPITGVTAYSI 179

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  129 bits (328), Expect = 8e-37
 Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 58/272 (21%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLG 63
           ++ +   L G+ A +TGG+ GIGA+ A+     GA V +             ++++   G
Sbjct: 22  SMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG 81

Query: 64  QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDT 123
           +A+A          I  D  +   +   +  TV   G LDILVN   +        + +T
Sbjct: 82  RAVA----------IRADNRDAEAIEQAIRETVEALGGLDILVN---SAGIWHSAPLEET 128

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY 183
             +D + ++AVN    F+  + A+R +     G I+ T G+         G+       Y
Sbjct: 129 TVADFDEVMAVNFRAPFVAIRSASRHL--GDGGRII-TIGSNLAELVPWPGISL-----Y 180

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVS---------HTYGLAMAEAIAS--------- 225
             SK  + GL K LA +LG  GI V+ V             G   AEA            
Sbjct: 181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHAEAQRERIATGSYGE 239

Query: 226 ---IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
              IA    + +A      +V   +L ++GG 
Sbjct: 240 PQDIAGLVAW-LA-GPQGKFVTGASLTIDGGA 269

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  130 bits (329), Expect = 9e-37
 Identities = 69/262 (26%), Positives = 114/262 (43%), Gaps = 50/262 (19%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA------DVQDNLGQALADKLGHQDVC 76
           +L+G+  +ITGG SGIG + +  F K GA + IA      D  +   +   +K G + V 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANET--KQYVEKEGVKCVL 101

Query: 77  YIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT 136
            +  D+S+E+   ++V  TV + G L+ILVN+      +    +       LE+   +N 
Sbjct: 102 -LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQ--GLEYITAEQLEKTFRINI 158

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
              F V K A   +  ++   I+ T      A    E L +     Y  +K  I+   +S
Sbjct: 159 FSYFHVTKAALSHL--KQGDVIINT--ASIVAYEGNETLID-----YSATKGAIVAFTRS 209

Query: 197 LAAELGRYGIRVDCVS----HTYGLAM------AEAIAS---------------IANAAL 231
           L+  L + GIRV+ V+     T    +       + ++                +A A +
Sbjct: 210 LSQSLVQKGIRVNGVAPGPIWT---PLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYV 266

Query: 232 YNMAKDDDTSYVGKQNLLVNGG 253
           Y +A   D+SYV  Q + VNGG
Sbjct: 267 Y-LA-SSDSSYVTGQMIHVNGG 286

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  129 bits (327), Expect = 1e-36
 Identities = 55/281 (19%), Positives = 93/281 (33%), Gaps = 54/281 (19%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLG 71
             +S+   +   A+ITGGA  IG S A   H+ G +VV+           L   L     
Sbjct: 2   NETSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA 61

Query: 72  HQDVCYIHCDVSNEREVIN----LVDTTVAKFGKLDILVN-SG-------CNLEYRGFVS 119
              V     D+S    +++    ++D +   FG+ D+LVN +           +     +
Sbjct: 62  GSAVL-CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAA 120

Query: 120 ILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-----RRRGCIL-YTTGTGTTACTEIE 173
                 + +  L   N +    + +  AR          R   ++               
Sbjct: 121 DAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPL---P 177

Query: 174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGLAMAEAIAS- 225
           G C      Y ++K  + GL ++ A EL    IRV+ V+               E     
Sbjct: 178 GFCV-----YTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRK 232

Query: 226 ------------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                       IA+A  + +    D  Y+    L V+GG 
Sbjct: 233 VPLGQSEASAAQIADAIAF-LV-SKDAGYITGTTLKVDGGL 271

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  129 bits (327), Expect = 2e-36
 Identities = 57/287 (19%), Positives = 101/287 (35%), Gaps = 72/287 (25%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNL 62
           P       L+G+VA++TG   GIG   A    + G KV++             A ++ N 
Sbjct: 19  PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG 78

Query: 63  GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSIL 121
             A            +  +V    +++ + +  V  FGKLDI+  NSG       F  + 
Sbjct: 79  SDAAC----------VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS----FGHVK 124

Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           D    + +R+  +NT G F VA+ A + +     G ++   G+ T     +         
Sbjct: 125 DVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLI-LMGSITGQAKAVPKHAV---- 177

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVS--------------------------HTY 215
            Y  SK  I    + +A ++    I V+ V+                             
Sbjct: 178 -YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVD 236

Query: 216 GLAMAEAIAS--------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
             A  +            IA    + +A  +D  +V  + + ++GG 
Sbjct: 237 EYAAVQWSPLRRVGLPIDIARVVCF-LA-SNDGGWVTGKVIGIDGGA 281

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  127 bits (321), Expect = 8e-36
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNL 62
               +   L G+VA+ TG   GIG   A    + GA VV+             A+++   
Sbjct: 11  GPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG 70

Query: 63  GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSIL 121
            Q +A          I  D+S   EV+ L D  V+ FG LD ++ NSG  +    +   L
Sbjct: 71  AQGVA----------IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV----WCDEL 116

Query: 122 DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN 181
           +  +   +++  +NT G F VA+   +    RR G I+  T +     T I         
Sbjct: 117 EVTQELFDKVFNLNTRGQFFVAQQGLKHC--RRGGRII-LTSSIAAVMTGIPNHAL---- 169

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVS 212
            Y  SK  + G  ++ A + G  G+ V+C++
Sbjct: 170 -YAGSKAAVEGFCRAFAVDCGAKGVTVNCIA 199

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  127 bits (321), Expect = 9e-36
 Identities = 69/287 (24%), Positives = 106/287 (36%), Gaps = 67/287 (23%)

Query: 7   SLKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI----------- 55
           S  +D               +VAI+TG + GIGA+ A     +G  VVI           
Sbjct: 8   SSGVDLGTENLYFQSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEE 67

Query: 56  --ADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNL 112
               ++   G+AL              DVS+   V  L  T    FG +D+LVN+ G   
Sbjct: 68  VAGKIEAAGGKALT----------AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP 117

Query: 113 EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-YTTGTGTTACTE 171
                 +I +T  +  +R++AVN  G F   + AA+ +  R  G I+  +T         
Sbjct: 118 ----LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRL--RVGGRIINMSTSQVGLL--- 168

Query: 172 IEGLCNIPANY--YGVSKFGILGLVKSLAAELGRYGIRVDCVS--------HTYGL--AM 219
                    +Y  Y  +K G+  +   L+ EL    I V+ V+           G    +
Sbjct: 169 -------HPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEV 221

Query: 220 AEAIAS------------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
            +  A             IA A  + +A   D ++V  Q L  NGG 
Sbjct: 222 RDRFAKLAPLERLGTPQDIAGAVAF-LA-GPDGAWVNGQVLRANGGI 266

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  126 bits (320), Expect = 1e-35
 Identities = 45/258 (17%), Positives = 91/258 (35%), Gaps = 38/258 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQ--DVCYIH 79
               R A+IT G  G+G    +     G  V +    D    + + +        + ++ 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            DV+ + ++  +V+  ++ FGK+D L+ N+G  +  R    ++D  + +   ++  N   
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKK--LVDYEEDEWNEMIQGNLTA 121

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKS 196
            F + K    VM  +  G I+             +        +  +  +K G++ L K+
Sbjct: 122 VFHLLKLVVPVMRKQNFGRII------NYGFQGADSAPGWIYRSA-FAAAKVGLVSLTKT 174

Query: 197 LAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IANAALYNMA 235
           +A E   YGI  + V                                   IA    + + 
Sbjct: 175 VAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISF-LC 233

Query: 236 KDDDTSYVGKQNLLVNGG 253
            +DD+  +    + V G 
Sbjct: 234 -EDDSDMITGTIIEVTGA 250

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  126 bits (319), Expect = 2e-35
 Identities = 51/199 (25%), Positives = 78/199 (39%), Gaps = 23/199 (11%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIH 79
             + G + +ITG   GIG   A  F K  +K+V+ D+  +  +  A K       V    
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV---SILDTPKSDLERLLAVNT 136
            D SN  ++ +      A+ G + ILVN+       G V    +  T    +E+   VN 
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNA------GVVYTSDLFATQDPQIEKTFEVNV 140

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVK 195
           +  F   K     M     G I+      T A     G  ++P    Y  SKF  +G  K
Sbjct: 141 LAHFWTTKAFLPAMTKNNHGHIV------TVAS--AAGHVSVPFLLAYCSSKFAAVGFHK 192

Query: 196 SLAAELGRY---GIRVDCV 211
           +L  EL      G++  C+
Sbjct: 193 TLTDELAALQITGVKTTCL 211

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  127 bits (322), Expect = 2e-35
 Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 22/200 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYI 78
              GR A +TGGA+G+G    +     G KV IAD++ +        L       +V  +
Sbjct: 5   DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGV 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV++        D   A+FG + IL N   N     F  I ++   D + LL VN  G
Sbjct: 65  QLDVASREGFKMAADEVEARFGPVSILCN---NAGVNLFQPIEESSYDDWDWLLGVNLHG 121

Query: 139 GFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGIL 191
                      MV R      + G ++ T                  +   Y  +KF + 
Sbjct: 122 VVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA--------AFLAAGSPGIYNTTKFAVR 173

Query: 192 GLVKSLAAELGRYGIRVDCV 211
           GL +SL   L +Y I V  +
Sbjct: 174 GLSESLHYSLLKYEIGVSVL 193

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  125 bits (317), Expect = 2e-35
 Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 42/252 (16%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           R A++TGG+ GIG + A+     G +V IA       +  A  LG      +  D+  + 
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASRNP---EEAAQSLG---AVPLPTDLEKD- 55

Query: 87  EVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
           +   LV   +   G L +LV++   N+  R     L+    +  R+L ++    FL+A+ 
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVNV--RK--PALELSYEEWRRVLYLHLDVAFLLAQA 111

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
           AA  M     G +L+     T           +P   Y  +K  +LGL ++LA E  R G
Sbjct: 112 AAPHMAEAGWGRVLFIGSVTT-----FTAGGPVPIPAYTTAKTALLGLTRALAKEWARLG 166

Query: 206 IRVDCVSHTY-----------GLAMAEAIAS------------IANAALYNMAKDDDTSY 242
           IRV+ +   Y              + E I +            IA  A   +   D+  Y
Sbjct: 167 IRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAV-LC-GDEAEY 224

Query: 243 VGKQNLLVNGGF 254
           +  Q + V+GGF
Sbjct: 225 LTGQAVAVDGGF 236

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  125 bits (316), Expect = 4e-35
 Identities = 41/257 (15%), Positives = 73/257 (28%), Gaps = 43/257 (16%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE 87
           V  ITG ASGIGA+  +L  + G  V+  D      +A     G ++   +   +     
Sbjct: 3   VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETA-VAAVLDRCGG 61

Query: 88  VI-----NLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V+            A    L + VN  G +    G        +      + V +I    
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGL--AEALSRGQQPAAVIVGSIAATQ 119

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
                  ++     G              E+          Y  SK+ +  L +    + 
Sbjct: 120 PGAAELPMVEAMLAGDEA--------RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDW 171

Query: 202 GRYGIRVDCVS------------HTYGLAMAEAIAS------------IANAALYNMAKD 237
              G+R++ V+                                     +A A  + +   
Sbjct: 172 AGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAF-LL-G 229

Query: 238 DDTSYVGKQNLLVNGGF 254
              S++    L V+GG 
Sbjct: 230 PQASFIHGSVLFVDGGM 246

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  125 bits (316), Expect = 5e-35
 Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 18/193 (9%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI----ADVQDNLGQALADKLGHQDVCYIH 79
           L+G+ A++TG  +GIG + A      GA V+I     +  +   + +  +     +  + 
Sbjct: 8   LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVV 67

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+  E+         + K+ K+DIL+N   NL     V   D P  D  +L  VN + G
Sbjct: 68  ADLGTEQG----CQDVIEKYPKVDILIN---NLGIFEPVEYFDIPDEDWFKLFEVNIMSG 120

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
             + +   + M+ R+ G +++       A    + + +     Y  +K   L L +SLA 
Sbjct: 121 VRLTRSYLKKMIERKEGRVIFI--ASEAAIMPSQEMAH-----YSATKTMQLSLSRSLAE 173

Query: 200 ELGRYGIRVDCVS 212
                 + V+ + 
Sbjct: 174 LTTGTNVTVNTIM 186

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  124 bits (313), Expect = 6e-35
 Identities = 40/246 (16%), Positives = 83/246 (33%), Gaps = 35/246 (14%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           +     I+ GG   +G++  + F KNG  V+  D+  N  QA ++ L   +      + +
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN-DQADSNILVDGNK-----NWT 54

Query: 84  NEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            + + I     +  +  ++D +    G    + G  +       + + ++  +     + 
Sbjct: 55  EQEQSILEQTASSLQGSQVDGVFCVAG---GWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           AK A   +  +  G +       T A   +    ++    YG++K  +  L  SLAA+  
Sbjct: 112 AKLATTHL--KPGGLL-----QLTGAAAAMGPTPSMIG--YGMAKAAVHHLTSSLAAKDS 162

Query: 203 --RYGIRVDCVS----HT--YGLAMAEAIAS-------IANAALYNMAKDDDTSYVGKQN 247
                  V  +      T      M  A  S       I+   L     +  +       
Sbjct: 163 GLPDNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLK-WTTETSSRPSSGAL 221

Query: 248 LLVNGG 253
           L +   
Sbjct: 222 LKITTE 227

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  124 bits (313), Expect = 1e-34
 Identities = 51/209 (24%), Positives = 80/209 (38%), Gaps = 32/209 (15%)

Query: 17  TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-DV 75
            +  Y+ L GR+A++TGG+ GIG   AQ   + GA+V I           A +L    D 
Sbjct: 20  HMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDC 79

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAV 134
             I  D+S+E     L         +LDILVN +G +    G  ++   P S  E+++ +
Sbjct: 80  QAIPADLSSEAGARRLAQALGELSARLDILVNNAGTS---WG-AALESYPVSGWEKVMQL 135

Query: 135 NTIGGFLVAKHAARVM----VPRRRGCI--------LYTTGTGTTACTEIEGLCNIPANY 182
           N    F   +    ++           +        +   G    A              
Sbjct: 136 NVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA-------------- 181

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV 211
           YG SK  +  L + LA EL    I V+ +
Sbjct: 182 YGPSKAALHQLSRMLAKELVGEHINVNVI 210

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  123 bits (312), Expect = 2e-34
 Identities = 64/283 (22%), Positives = 97/283 (34%), Gaps = 60/283 (21%)

Query: 13  NILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH 72
            ++P  S        VA++TG  SGIG   A+   K G +V +    +   +    +L  
Sbjct: 9   GLVPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE 68

Query: 73  Q--DVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKS 126
              +     CDV +  E+  LV   V ++G +D+LVN     G            +    
Sbjct: 69  AGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGGGA-------TAELADE 121

Query: 127 DLERLLAVNTIGGFLVAKHAARV--MVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANY 182
               ++  N  G F V K   +   M+ R  G I+    TG        G   +   A  
Sbjct: 122 LWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG--------GKQGVVHAAP- 172

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCV--------------------SHTYGLAMAEA 222
           Y  SK G++G  K+L  EL R GI V+ V                             + 
Sbjct: 173 YSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDR 232

Query: 223 IAS------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
           I +            +A    Y +      + V  Q L V GG
Sbjct: 233 ITARVPIGRYVQPSEVAEMVAY-LI-GPGAAAVTAQALNVCGG 273

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  124 bits (313), Expect = 3e-34
 Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 42/252 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---------------ALA 67
           RLQG+VA ITG A G G + A    ++GA +V  D+                      L 
Sbjct: 43  RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLV 102

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDT 123
           ++ G + +     DV +   +  +VD  +A+FG +DILV+    S           ++  
Sbjct: 103 EEQGRRIIAR-QADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGE-------VVSL 154

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP--A 180
                  +L  N IG +   +     M+ R + G +++ + T         GL   P  +
Sbjct: 155 TDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV--------GLRGAPGQS 206

Query: 181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY---GLAMAEAIASIANAALYNMAKD 237
           + Y  SK G+ GL+ SLA E+GR+ IRV+ V+       +A+ E +  +    L N  ++
Sbjct: 207 H-YAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTRE 265

Query: 238 DDTSYVGKQNLL 249
           D      +  LL
Sbjct: 266 DAAELFSQLTLL 277

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  122 bits (308), Expect = 4e-34
 Identities = 55/192 (28%), Positives = 79/192 (41%), Gaps = 25/192 (13%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           R A++TGGASG+G +AA      G +VV+ D++      +          Y+  DV+ E 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI----------YVEGDVTREE 52

Query: 87  EVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
           +V   V         L  +V++ G  L  +              R+L VN +G F V + 
Sbjct: 53  DVRRAVARAQE-EAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 111

Query: 146 AARVMV------PRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           AA  M         +RG I+ T           EG   I    Y  SK G++ L    A 
Sbjct: 112 AAWAMRENPPDAEGQRGVIVNTASVAA-----FEG--QIGQAAYAASKGGVVALTLPAAR 164

Query: 200 ELGRYGIRVDCV 211
           EL  +GIRV  V
Sbjct: 165 ELAGWGIRVVTV 176

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  123 bits (310), Expect = 6e-34
 Identities = 53/281 (18%), Positives = 95/281 (33%), Gaps = 54/281 (19%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQ- 73
             +     ++   A++TG A  IG + A   H+ G +VVI          +LAD+L  + 
Sbjct: 13  GLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKER 72

Query: 74  --DVCYIHCDVSNE----REVINLVDTTVAKFGKLDILVN------SGCNLEYRGFVSIL 121
                    D++N          ++++    FG+ D+LVN          ++     +  
Sbjct: 73  SNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSN 132

Query: 122 DTPKSDL-ERLLAVNTIGGFLVAKHAARVMVP------RRRGCILYTTGTGTTACTEIEG 174
                     L+  N I  FL+    A+               I+             + 
Sbjct: 133 GKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIV-----NLCDAMVDQP 187

Query: 175 LCNIPANY--YGVSKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGLAMAEAIAS 225
                  +  Y + K  ++GL +S A EL  YGIRV+ V+          G    +    
Sbjct: 188 C----MAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRR 243

Query: 226 -------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                        IA+A ++ +       Y+    + V+GG
Sbjct: 244 KVPLGRREASAEQIADAVIF-LV-SGSAQYITGSIIKVDGG 282

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  121 bits (305), Expect = 8e-34
 Identities = 58/222 (26%), Positives = 87/222 (39%), Gaps = 26/222 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
                  +ITG + GIG + A+L H  G +V +    +   QALA +L       +  DV
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDV 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
             E +    V      FG+L  LVN+ G  +       + +    +   +L  N  G FL
Sbjct: 60  REEGDWARAVAAMEEAFGELSALVNNAGVGV----MKPVHELTLEEWRLVLDTNLTGAFL 115

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAE 200
             +HA   ++ R  G I+     G+ A     G         Y  SKFG+LGL  +   +
Sbjct: 116 GIRHAVPALLRRGGGTIV---NVGSLA-----GKNPFKGGAAYNASKFGLLGLAGAAMLD 167

Query: 201 LGRYGIRVDCVS----------HTYGLAMAEAIASIANAALY 232
           L    +RV  V           +T G A       +A A L+
Sbjct: 168 LREANVRVVNVLPGSVDTGFAGNTPGQAWKLKPEDVAQAVLF 209

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  122 bits (308), Expect = 9e-34
 Identities = 52/210 (24%), Positives = 82/210 (39%), Gaps = 38/210 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---------------ALA 67
             +G+ A+ITGGA G+G S A    + GA + I D  +N                  AL 
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALV 66

Query: 68  DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDT 123
           +K G + +     DV +   + + V       G +DI +     S   L       + + 
Sbjct: 67  EKTGRRCISA-KVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIAL-------LPEV 118

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--AN 181
             +  + ++  N  G F      A  M+ R  G I+  +           G       A+
Sbjct: 119 ESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML--------GHSANFAQAS 170

Query: 182 YYGVSKFGILGLVKSLAAELGRYGIRVDCV 211
            Y  SK+G++GL K  A +L  YGI V+ V
Sbjct: 171 -YVSSKWGVIGLTKCAAHDLVGYGITVNAV 199

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  121 bits (306), Expect = 1e-33
 Identities = 44/275 (16%), Positives = 92/275 (33%), Gaps = 75/275 (27%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
            + +I+G A+GIGA+  ++    G ++V  D++D      A+         +  D+S   
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRD------AE---------VIADLSTAE 46

Query: 87  EVINLVDTTVAK-FGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
                +   +AK    +D LV   G           L      L  +++VN  G   +  
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAG-----------LGPQTKVLGNVVSVNYFGATELMD 95

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY---------------------Y 183
                +    +   +  +   +      +    +                         Y
Sbjct: 96  AFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVS----HT-----------YGLAMAEAI----- 223
             SK  +   V+  AA  G  G+R++ ++     T           YG ++A+ +     
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGR 215

Query: 224 ----ASIANAALYNMAKDDDTSYVGKQNLLVNGGF 254
               + +A+   + +      SYV    ++++GG 
Sbjct: 216 RAEPSEMASVIAF-LM-SPAASYVHGAQIVIDGGI 248

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  121 bits (305), Expect = 2e-33
 Identities = 65/272 (23%), Positives = 92/272 (33%), Gaps = 60/272 (22%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
            + + A +TG +SGIG + A+     G  V           A  D L     DV    CD
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD 81

Query: 82  VSNEREVINLVDTTVAKFGKLDILVN----SGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           V++  EV   V   V +FG + ILVN    +G            D   +    +L  N  
Sbjct: 82  VTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE-------TADLDDALWADVLDTNLT 134

Query: 138 GGFLVAKHAARV--MVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGL 193
           G F V +   R   M     G I+    TG        G   +   A  Y  SK G++G 
Sbjct: 135 GVFRVTREVLRAGGMREAGWGRIVNIASTG--------GKQGVMYAAP-YTASKHGVVGF 185

Query: 194 VKSLAAELGRYGIRVDCV--------------------SHTYGLAMAEAIAS-------- 225
            KS+  EL + GI V+ V                           + E   +        
Sbjct: 186 TKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYS 245

Query: 226 ----IANAALYNMAKDDDTSYVGKQNLLVNGG 253
               +A    Y +   D  + +  Q L V GG
Sbjct: 246 TPEEVAGLVGY-LV-TDAAASITAQALNVCGG 275

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  120 bits (304), Expect = 2e-33
 Identities = 67/269 (24%), Positives = 109/269 (40%), Gaps = 56/269 (20%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---------HQ 73
           RL+  +A++TG  SGIG + +      GA V   D+     Q     LG           
Sbjct: 4   RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRG 63

Query: 74  DVCYIHCDVSNEREVINLVDTTVAKFGK-LDILVNS-GC---NLEYRGFVSILDTPKSDL 128
           +      DVS  R    L++   A F +   ++V+  G             +L   + D 
Sbjct: 64  NHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEF-------LLHMSEDDW 116

Query: 129 ERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP--ANYYGV 185
           ++++AVN  G FLV + AA+ +V     G I+          + I G        N Y  
Sbjct: 117 DKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINI--------SSIVGKVGNVGQTN-YAA 167

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAI--------A 224
           SK G++GL ++ A ELGR+GIR + V         T  +       + E I         
Sbjct: 168 SKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPE 227

Query: 225 SIANAALYNMAKDDDTSYVGKQNLLVNGG 253
            +A+   + +A  +D+ Y+   ++ V GG
Sbjct: 228 DVADVVAF-LA-SEDSGYITGTSVEVTGG 254

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  119 bits (300), Expect = 6e-33
 Identities = 68/271 (25%), Positives = 121/271 (44%), Gaps = 64/271 (23%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI 78
           S +  L+G+VA++TG + GIG + A+L  + GAKV+     ++  QA++D LG      +
Sbjct: 2   SQFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDN-GKGM 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAV 134
             +V+N   +  ++     +FG +DILV N+G    NL       ++   + +   ++  
Sbjct: 61  ALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL-------LMRMKEEEWSDIMET 113

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYY 183
           N    F ++K   R M+ +R+G I+                 N+            AN Y
Sbjct: 114 NLTSIFRLSKAVLRGMMKKRQGRII-----------------NVGSVVGTMGNAGQAN-Y 155

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS----- 225
             +K G++G  KS+A E+   G+ V+ V+        T  L      A    + +     
Sbjct: 156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGD 215

Query: 226 ---IANAALYNMAKDDDTSYVGKQNLLVNGG 253
              IA+A  + +A   + +Y+  + L VNGG
Sbjct: 216 PREIASAVAF-LA-SPEAAYITGETLHVNGG 244

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  119 bits (301), Expect = 9e-33
 Identities = 43/199 (21%), Positives = 71/199 (35%), Gaps = 24/199 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADK---LGHQDVCYI 78
            LQG+  I+TG + GIG   A    K GA VV+    ++ L Q +      LG     YI
Sbjct: 25  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGAASAHYI 83

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNT 136
              + +       V       G LD+L+    N         ++       + + + VN 
Sbjct: 84  AGTMEDMTFAEQFVAQAGKLMGGLDMLIL---NHITNTSL--NLFHDDIHHVRKSMEVNF 138

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVK 195
           +   ++   A   M+ +  G I+          + + G    P    Y  SKF + G   
Sbjct: 139 LSYVVLTVAALP-MLKQSNGSIVVV--------SSLAGKVAYPMVAAYSASKFALDGFFS 189

Query: 196 SLAAELG--RYGIRVDCVS 212
           S+  E    R  + +    
Sbjct: 190 SIRKEYSVSRVNVSITLCV 208

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  118 bits (298), Expect = 1e-32
 Identities = 46/245 (18%), Positives = 86/245 (35%), Gaps = 44/245 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAK-------VVIADVQDNLGQALADKLGHQ--DVCY 77
            + +ITG   GIG + A  F +           +V++       + ++ +   +      
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           I  D+S+  +V  L    V ++G +D LVN+ G       F ++ D  + D +  +  N 
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGR----FGALSDLTEEDFDYTMNTNL 118

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLV 194
            G F + +    +M  +  G I + T                   + Y   SKFG  GLV
Sbjct: 119 KGTFFLTQALFALMERQHSGHIFFITSVA--------ATKAFRHSSIYCM-SKFGQRGLV 169

Query: 195 KSLAAELGRYGIRVDCVS----HTYGLAMAEAIA-----------SIANAALYNMAKDDD 239
           +++     +  +R+  V     +T    M   +             IA   +        
Sbjct: 170 ETMRLYARKCNVRITDVQPGAVYT---PMWGKVDDEMQALMMMPEDIAAPVVQ-AYLQPS 225

Query: 240 TSYVG 244
            + V 
Sbjct: 226 RTVVE 230

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  119 bits (300), Expect = 2e-32
 Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 47/259 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
            + +VA++TG   GIG   A++  K+ + V+          ++ D++     +      D
Sbjct: 42  GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGD 101

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTI 137
           VS + E+  +++  + +   +DILV N+G    NL        L     + E +L  N  
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGITRDNL-------FLRMKNDEWEDVLRTNLN 154

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVK 195
             F + +  ++ M+  R G I+          + I GL      AN Y  SK G++G  K
Sbjct: 155 SLFYITQPISKRMINNRYGRIINI--------SSIVGLTGNVGQAN-YSSSKAGVIGFTK 205

Query: 196 SLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IANAALYNM 234
           SLA EL    I V+ ++        T  +       +   I +        +AN A + +
Sbjct: 206 SLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACF-L 264

Query: 235 AKDDDTSYVGKQNLLVNGG 253
           +  D + Y+  +  +++GG
Sbjct: 265 S-SDKSGYINGRVFVIDGG 282

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  123 bits (311), Expect = 2e-32
 Identities = 55/213 (25%), Positives = 88/213 (41%), Gaps = 26/213 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY----- 77
           R  GRVA++TG  +G+G   A LF + GAKVV+ D+        A +     V       
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 78  ------IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERL 131
                  +  V +      +++T +  FG++DILVN+   L  R  V   +    D   +
Sbjct: 76  GGEAVADYNSVIDGA---KVIETAIKAFGRVDILVNNAGILRDRSLVKTSE---QDWNLV 129

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL-CNIPANYYGVSKFGI 190
             V+  G F   + A   M  +  G I+ T+           G+  N     Y  +K G+
Sbjct: 130 NDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNS--------GIYGNFGQVNYTAAKMGL 181

Query: 191 LGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAI 223
           +GL  ++A E  R  +  + +  T    M E I
Sbjct: 182 IGLANTVAIEGARNNVLCNVIVPTAASRMTEGI 214

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  123 bits (311), Expect = 2e-32
 Identities = 58/256 (22%), Positives = 101/256 (39%), Gaps = 42/256 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY----- 77
             + +V IITG   G+G   +  F K GAKVV+ D+   L     +      V       
Sbjct: 5   DFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 78  ------IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERL 131
                  + +V +      +V+T V  FG + +++N+   L       + +    D + +
Sbjct: 65  GGVAVADYNNVLDGD---KIVETAVKNFGTVHVIINNAGILRDASMKKMTE---KDYKLV 118

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFG 189
           + V+  G F V K A      ++ G I+ T+           GL      AN Y  +K  
Sbjct: 119 IDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPA--------GLYGNFGQAN-YASAKSA 169

Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAI-----------ASIANAALYNMAKDD 238
           +LG  ++LA E  +Y I+ + ++      M E+I             +A   LY ++  +
Sbjct: 170 LLGFAETLAKEGAKYNIKANAIAPLARSRMTESIMPPPMLEKLGPEKVAPLVLY-LSSAE 228

Query: 239 DTSYVGKQNLLVNGGF 254
             + +  Q   V  GF
Sbjct: 229 --NELTGQFFEVAAGF 242

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  112 bits (281), Expect = 2e-28
 Identities = 70/255 (27%), Positives = 111/255 (43%), Gaps = 50/255 (19%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV----------QDNLGQALADKLG 71
             L+ +V +ITG  +G+G   A+ F K GAKVV+ D           +   G+A  D   
Sbjct: 318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPD--- 374

Query: 72  HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERL 131
                    DV+ + E   ++   + K+G +DILVN+   L  R F  +    K + + +
Sbjct: 375 -------QHDVAKDSE--AIIKNVIDKYGTIDILVNNAGILRDRSFAKM---SKQEWDSV 422

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFG 189
             V+ IG F +++ A    V ++ G I+  T T         G+      ANY   SK G
Sbjct: 423 QQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTS--------GIYGNFGQANY-SSSKAG 473

Query: 190 ILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAI-----------ASIANAALYNMAKDD 238
           ILGL K++A E  +  I+V+ V+     AM  +I             +A   +Y +  DD
Sbjct: 474 ILGLSKTMAIEGAKNNIKVNIVAPHAETAMTLSIMREQDKNLYHADQVAPLLVY-LGTDD 532

Query: 239 DTSYVGKQNLLVNGG 253
               V  +   + GG
Sbjct: 533 --VPVTGETFEIGGG 545

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  119 bits (300), Expect = 3e-32
 Identities = 61/252 (24%), Positives = 96/252 (38%), Gaps = 36/252 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIH-- 79
           R  GRV ++TG   G+G + A  F + GA VV+ D+  D  G         + V  I   
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 80  -----CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
                 +  +      LV T +  FG++D++VN+   L  R F  I D    D + +  V
Sbjct: 66  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISD---EDWDIIQRV 122

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILG 192
           +  G F V + A   M  +  G I+ T            G+      AN Y  +K G+LG
Sbjct: 123 HLRGSFQVTRAAWDHMKKQNYGRIIMTASAS--------GIYGNFGQAN-YSAAKLGLLG 173

Query: 193 LVKSLAAELGRYGIRVDCVSHTYGLAMAEAI-----------ASIANAALYNMAKDDDTS 241
           L  +L  E  +  I  + ++   G  M E +             +A   L+ +  +    
Sbjct: 174 LANTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLW-LCHES--C 230

Query: 242 YVGKQNLLVNGG 253
                   V  G
Sbjct: 231 EENGGLFEVGAG 242

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  117 bits (296), Expect = 3e-32
 Identities = 41/192 (21%), Positives = 84/192 (43%), Gaps = 15/192 (7%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQA---LADKLGHQDVCYIH 79
           +QG++A++T G+SG+G ++A    +NGA++++    ++ L  A   +A  +    V  + 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            D+    ++  L +      G  DILV    +         ++    D +    +     
Sbjct: 65  GDIREPGDIDRLFE-KARDLGGADILVY---STGGPRPGRFMELGVEDWDESYRLLARSA 120

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
             V + AA  MV +  G ++Y            + L         + +  ++G+V++LA 
Sbjct: 121 VWVGRRAAEQMVEKGWGRMVYIGSVTLLRP--WQDLAL-----SNIMRLPVIGVVRTLAL 173

Query: 200 ELGRYGIRVDCV 211
           EL  +G+ V+ V
Sbjct: 174 ELAPHGVTVNAV 185

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  117 bits (296), Expect = 4e-32
 Identities = 69/266 (25%), Positives = 113/266 (42%), Gaps = 62/266 (23%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIHC 80
           L  R+A++TG + GIG + A      GAKV +           +   +     +   +  
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNT 136
           DVS E EV  L    + ++G+LD+LV N+G     L       +L   + D + +L +N 
Sbjct: 86  DVSQESEVEALFAAVIERWGRLDVLVNNAGITRDTL-------LLRMKRDDWQSVLDLNL 138

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGV 185
            G FL ++ AA++M+ +R G I+                 NI            AN Y  
Sbjct: 139 GGVFLCSRAAAKIMLKQRSGRII-----------------NIASVVGEMGNPGQAN-YSA 180

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGLAMAEAIASI-----------A 227
           +K G++GL K++A EL   GI V+ V+        T  LA  + +  I           A
Sbjct: 181 AKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAAEKLLEVIPLGRYGEAAEVA 240

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
               + +A D   +Y+  Q + ++GG
Sbjct: 241 GVVRF-LAADPAAAYITGQVINIDGG 265

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  119 bits (299), Expect = 5e-32
 Identities = 52/294 (17%), Positives = 90/294 (30%), Gaps = 77/294 (26%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCY 77
                VA++TG A  +G S A+  H  G  V +     A   + L   L  +  +  +  
Sbjct: 43  APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT- 101

Query: 78  IHCDVSNE-----------------REVINLVDTTVAKFGKLDILVNSGCN--------- 111
           +  D+SN                       LV      +G+ D+LVN   N         
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVN---NASSFYPTPL 158

Query: 112 -----LEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP------RRRGCIL- 159
                  +   V   +  ++    L   N I  + + K  A  +             I+ 
Sbjct: 159 LRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIIN 218

Query: 160 YTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS-----HT 214
                         G        Y ++K  + GL +S A EL    IRV+ V        
Sbjct: 219 MVDAMTNQPL---LGYTI-----YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV 270

Query: 215 YGL--AMAEAIAS-------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             +  A+ E   S             +++  ++ +       Y+    + V+GG
Sbjct: 271 DDMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIF-LC-SSKAKYITGTCVKVDGG 322

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  117 bits (295), Expect = 6e-32
 Identities = 69/266 (25%), Positives = 109/266 (40%), Gaps = 64/266 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L GR A++TG   GIG + A+ FH  GA V +   +++  + +A  LG   V     ++S
Sbjct: 25  LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKD-VFVFSANLS 83

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           + + +  L +    +   +DILV N+G     L  R           D + +LAVN    
Sbjct: 84  DRKSIKQLAEVAEREMEGIDILVNNAGITRDGLFVR-------MQDQDWDDVLAVNLTAA 136

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVSKF 188
             + +     M+ RR G I+                 NI             N Y  +K 
Sbjct: 137 STLTRELIHSMMRRRYGRII-----------------NITSIVGVVGNPGQTN-YCAAKA 178

Query: 189 GILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IA 227
           G++G  K+LA E+    I V+C++        T  L      A+   I          IA
Sbjct: 179 GLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIA 238

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
            A +Y +A  D+ +Y+  Q L +NGG
Sbjct: 239 FATVY-LA-SDEAAYLTGQTLHINGG 262

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  117 bits (295), Expect = 8e-32
 Identities = 51/291 (17%), Positives = 89/291 (30%), Gaps = 71/291 (24%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-----ADVQDNLGQALADKLGHQDVCY 77
                VA++TG A  +G S A+  H  G  V +     A   + L   L  +  +  +  
Sbjct: 6   APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT- 64

Query: 78  IHCDVSNE-----------------REVINLVDTTVAKFGKLDILVN-----------SG 109
           +  D+SN                       LV      +G+ D+LVN             
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRN 124

Query: 110 CNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP------RRRGCIL-YTT 162
               +   V   +  ++    L   N I  + + K  A  +             I+    
Sbjct: 125 DEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVD 184

Query: 163 GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS-----HTYGL 217
                      G        Y ++K  + GL +S A EL    IRV+ V          +
Sbjct: 185 AMTNQPL---LGYTI-----YTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM 236

Query: 218 --AMAEAIAS-------------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             A+ E   S             +++  ++ +       Y+    + V+GG
Sbjct: 237 PPAVWEGHRSKVPLYQRDSSAAEVSDVVIF-LC-SSKAKYITGTCVKVDGG 285

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  116 bits (292), Expect = 9e-32
 Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 48/261 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIH 79
           +L+G+ AI+TG + G+G + A      GA +V+          A A++      +V    
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVN 135
            DV N  +V N+V T +  FG++DILV N+G     L       +L   + D + +L  N
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL-------MLKMSEKDWDDVLNTN 114

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGL 193
               +L  K  +++M+ ++ G I+          T I G+      AN Y  SK G++G 
Sbjct: 115 LKSAYLCTKAVSKIMLKQKSGKIINI--------TSIAGIIGNAGQAN-YAASKAGLIGF 165

Query: 194 VKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IANAALY 232
            KS+A E    GI  + V+        T  L           I          +AN   +
Sbjct: 166 TKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGF 225

Query: 233 NMAKDDDTSYVGKQNLLVNGG 253
            +A  DD++Y+  Q + ++GG
Sbjct: 226 -LA-SDDSNYITGQVINIDGG 244

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  116 bits (293), Expect = 1e-31
 Identities = 64/268 (23%), Positives = 107/268 (39%), Gaps = 65/268 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
           L  +VAI+TG + GIG + A    + GA V+     +   + +         +      +
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLN 85

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTI 137
           V++   V  LV++T+ +FG L++LV N+G     L        +     + + ++  N  
Sbjct: 86  VNDATAVDALVESTLKEFGALNVLVNNAGITQDQL-------AMRMKDDEWDAVIDTNLK 138

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVS 186
             F +++   R M+  R G I+                 NI             N Y  +
Sbjct: 139 AVFRLSRAVLRPMMKARGGRIV-----------------NITSVVGSAGNPGQVN-YAAA 180

Query: 187 KFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS-------- 225
           K G+ G+ ++LA E+G  GI V+CV+        T GL      A+   I          
Sbjct: 181 KAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPED 240

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGG 253
           IA+A  + +A      Y+    L VNGG
Sbjct: 241 IAHAVAF-LA-SPQAGYITGTTLHVNGG 266

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  114 bits (287), Expect = 6e-31
 Identities = 63/268 (23%), Positives = 102/268 (38%), Gaps = 65/268 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCD 81
           L  +VA++TG + GIG   A      GA VV         +   + +  +      +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTI 137
           +S+   + N      A+   +DILV N+G    NL  R         + + + ++  N  
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLMMR-------MSEDEWQSVINTNLS 115

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVS 186
             F ++K   R M+ +R G I+                 +I             N Y  +
Sbjct: 116 SIFRMSKECVRGMMKKRWGRII-----------------SIGSVVGSAGNPGQTN-YCAA 157

Query: 187 KFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS-------- 225
           K G++G  KSLA E+    I V+ V+        T  L       +A  I S        
Sbjct: 158 KAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKD 217

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGG 253
           IA A  + +A  ++  Y+  Q L VNGG
Sbjct: 218 IAAAVAF-LAS-EEAKYITGQTLHVNGG 243

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  113 bits (286), Expect = 8e-31
 Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 66/269 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIHC 80
           LQG+V+++TG   GIG + A+     G+ V+I        +A+A+++ ++       +  
Sbjct: 5   LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEM 64

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNT 136
           ++ +E  +    +        +DILV N+G     L        L     D E +L VN 
Sbjct: 65  NLLSEESINKAFEEIYNLVDGIDILVNNAGITRDKL-------FLRMSLLDWEEVLKVNL 117

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGV 185
            G FLV +++ R M+ +R G I+                 NI             N Y  
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIV-----------------NISSVVGFTGNVGQVN-YST 159

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS------- 225
           +K G++G  KSLA EL    + V+ V+        T  L         E I         
Sbjct: 160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPE 219

Query: 226 -IANAALYNMAKDDDTSYVGKQNLLVNGG 253
            +AN  L+ +   +  SY+  + + VNGG
Sbjct: 220 EVANVVLF-LC-SELASYITGEVIHVNGG 246

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  115 bits (289), Expect = 1e-30
 Identities = 59/221 (26%), Positives = 93/221 (42%), Gaps = 32/221 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCY---- 77
            + GRV I+TG   GIG + A  F   GA+VV+ D+     G   +     Q V      
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 78  -------IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLER 130
                     +V++  +   L+ T V  FG LD+LVN+   +  R   +  +    + + 
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSE---EEFDA 140

Query: 131 LLAVNTIGGFLVAKHAARVMVPRRR------GCILYTTGTGTTACTEIEGLCNIP--ANY 182
           ++AV+  G F   +HAA       +      G I+ T+           GL       N 
Sbjct: 141 VIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA--------GLQGSVGQGN- 191

Query: 183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAI 223
           Y  +K GI  L    AAE+GRYG+ V+ ++ +    M E +
Sbjct: 192 YSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSARTRMTETV 232

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  112 bits (284), Expect = 1e-30
 Identities = 58/266 (21%), Positives = 104/266 (39%), Gaps = 65/266 (24%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIHCDVS 83
            V ++TG + GIG + A    K G KV++         + ++ ++            DVS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            E +V  ++ T +  +G +D++V N+G     L       ++   KS  + ++ +N  G 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTL-------LIRMKKSQWDEVIDLNLTGV 114

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVSKF 188
           FL  + A ++M+ +R+G I+                 NI            AN Y  +K 
Sbjct: 115 FLCTQAATKIMMKKRKGRII-----------------NIASVVGLIGNIGQAN-YAAAKA 156

Query: 189 GILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIA 227
           G++G  K+ A E     I V+ V         T  L       +   I         ++A
Sbjct: 157 GVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVA 216

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
               + +A     SY+  Q   ++GG
Sbjct: 217 GLVEF-LALSPAASYITGQAFTIDGG 241

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  112 bits (284), Expect = 1e-30
 Identities = 76/269 (28%), Positives = 118/269 (43%), Gaps = 66/269 (24%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIHC 80
           L+G+VA++TG + GIG + A    K GA VV+     +     + D++     D   +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNT 136
           DV+N  +V N+V  TV  FG++DILV N+G    NL       ++   + + + ++  N 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL-------LMRMKEEEWDTVINTNL 114

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGV 185
            G FL  K  +R M+ +R G I+                 NI            AN Y  
Sbjct: 115 KGVFLCTKAVSRFMMRQRHGRIV-----------------NIASVVGVTGNPGQAN-YVA 156

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS------- 225
           +K G++GL K+ A EL    I V+ ++        T  L       M + I +       
Sbjct: 157 AKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQ 216

Query: 226 -IANAALYNMAKDDDTSYVGKQNLLVNGG 253
            IANA  +  A  D + Y+  Q L V+GG
Sbjct: 217 DIANAVTF-FAS-DQSKYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  112 bits (284), Expect = 2e-30
 Identities = 68/260 (26%), Positives = 111/260 (42%), Gaps = 48/260 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ--DVCYIHC 80
              + A++TG + GIG S A    + G  V +         +A+ +++  +  D   I  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNT 136
           +V++  EV  ++   V++FG LD+LV N+G    NL       ++   + + + ++  N 
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL-------LMRMKEQEWDDVIDTNL 114

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLV 194
            G F   + A   M+ +R G I+          + + G    P  AN Y  +K G++GL 
Sbjct: 115 KGVFNCIQKATPQMLRQRSGAIINL--------SSVVGAVGNPGQAN-YVATKAGVIGLT 165

Query: 195 KSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IANAALYN 233
           KS A EL   GI V+ V+        T  L       M   I          IAN   + 
Sbjct: 166 KSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAF- 224

Query: 234 MAKDDDTSYVGKQNLLVNGG 253
           +A  D   Y+  Q + VNGG
Sbjct: 225 LA-SDKAKYITGQTIHVNGG 243

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  111 bits (281), Expect = 4e-30
 Identities = 41/192 (21%), Positives = 72/192 (37%), Gaps = 20/192 (10%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L+ ++A++TG   G+G    +   ++     +    ++L  ALA+  G   V  I  D+
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNPEHL-AALAEIEG---VEPIESDI 57

Query: 83  SNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
             E      VD  +     +D LV++           +I     ++    L +N I    
Sbjct: 58  VKEVLEEGGVD-KLKNLDHVDTLVHAAAVAR----DTTIEAGSVAEWHAHLDLNVIVPAE 112

Query: 142 VAKHAARVMVPRRRGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           +++     +     GC++Y   G G           +     Y  SK  + GL  +   E
Sbjct: 113 LSRQLLPALR-AASGCVIYINSGAGNGP--------HPGNTIYAASKHALRGLADAFRKE 163

Query: 201 LGRYGIRVDCVS 212
               GIRV  VS
Sbjct: 164 EANNGIRVSTVS 175

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  111 bits (279), Expect = 8e-30
 Identities = 60/265 (22%), Positives = 103/265 (38%), Gaps = 54/265 (20%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV 75
            T  +      R  ++TGG  GIG + AQ    +G KV +         A     G +  
Sbjct: 5   ATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS---GAPKGLFGVE-- 59

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERL 131
                DV++   V           G +++LV N+G             ++   +   E++
Sbjct: 60  ----VDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF-------LMRMTEEKFEKV 108

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFG 189
           +  N  G F VA+ A+R M   + G +++           + GL  I   AN Y  SK G
Sbjct: 109 INANLTGAFRVAQRASRSMQRNKFGRMIFI--------GSVSGLWGIGNQAN-YAASKAG 159

Query: 190 ILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIAN 228
           ++G+ +S+A EL +  +  + V+        T  L         + I        A +A 
Sbjct: 160 VIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAG 219

Query: 229 AALYNMAKDDDTSYVGKQNLLVNGG 253
              + +A  +D SY+    + V+GG
Sbjct: 220 VVSF-LA-SEDASYISGAVIPVDGG 242

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  109 bits (276), Expect = 2e-29
 Identities = 61/267 (22%), Positives = 98/267 (36%), Gaps = 67/267 (25%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKL---GHQDVCYIHCDV 82
           R A+ITG + GIG + A    ++G  + I         + +A++    G   V  +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 83  SNEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIG 138
                   LV       G LD LV N+G     L       ++     D E +L  N   
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGITRDTL-------LVRMKDEDWEAVLEANLSA 114

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVSK 187
            F   + A ++M+  R G I+                 NI            AN Y  SK
Sbjct: 115 VFRTTREAVKLMMKARFGRIV-----------------NITSVVGILGNPGQAN-YVASK 156

Query: 188 FGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASI 226
            G++G  +++A E  + GI V+ V+        T  L      A  + I          +
Sbjct: 157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEV 216

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGG 253
           A A  + +   +   Y+  Q L V+GG
Sbjct: 217 AEAVAF-LV-SEKAGYITGQTLCVDGG 241

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  109 bits (274), Expect = 4e-29
 Identities = 60/257 (23%), Positives = 99/257 (38%), Gaps = 54/257 (21%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
              R  ++TGG  GIG + A+ F   G KV I        +             + CD++
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA---------VKCDIT 69

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           +  +V           G +++L+ N+G     L       ++   + D   ++  N  G 
Sbjct: 70  DTEQVEQAYKEIEETHGPVEVLIANAGVTKDQL-------LMRMSEEDFTSVVETNLTGT 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKSL 197
           F V K A R M+  ++G ++          + + GL      AN Y  SK G++G  +SL
Sbjct: 123 FRVVKRANRAMLRAKKGRVVLI--------SSVVGLLGSAGQAN-YAASKAGLVGFARSL 173

Query: 198 AAELGRYGIRVDCVS-------HTYGL------AMAEAI--------ASIANAALYNMAK 236
           A ELG   I  + V+        T  L       +   +          IA    + +A 
Sbjct: 174 ARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRF-LA- 231

Query: 237 DDDTSYVGKQNLLVNGG 253
            DD SY+    + V+GG
Sbjct: 232 SDDASYITGAVIPVDGG 248

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  109 bits (274), Expect = 4e-29
 Identities = 74/266 (27%), Positives = 121/266 (45%), Gaps = 68/266 (25%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G+ ++ITG +SGIG++ A+L HK G+KV+I+   +   ++L + L         C+++
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDN-YTIEVCNLA 70

Query: 84  NEREVINLVDTTVAKFGKLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           N+ E  NL+     K   LDILV N+G     L  R           D ++++ +N    
Sbjct: 71  NKEECSNLIS----KTSNLDILVCNAGITSDTLAIR-------MKDQDFDKVIDINLKAN 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYGVSKF 188
           F++ + A + M+ +R G I+                 NI            AN Y  SK 
Sbjct: 120 FILNREAIKKMIQKRYGRII-----------------NISSIVGIAGNPGQAN-YCASKA 161

Query: 189 GILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAIAS--------IA 227
           G++G+ KSL+ E+   GI V+ V+        T  L      A+ + I          +A
Sbjct: 162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVA 221

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGG 253
            A  + +A  ++ SY+  Q L VNGG
Sbjct: 222 YAVAF-LAS-NNASYITGQTLHVNGG 245

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  109 bits (274), Expect = 6e-29
 Identities = 57/270 (21%), Positives = 91/270 (33%), Gaps = 66/270 (24%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ--DVCYIH 79
            +  R+A +TGG  GIG S  Q  HK+G +VV              +       D     
Sbjct: 10  VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVN-SGC---NLEYRGFVSILDTPKSDLERLLAVN 135
            +V +        D   A+ G++D+LVN +G     +            + D + ++  N
Sbjct: 70  GNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVV-------FRKMTREDWQAVIDTN 122

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYG 184
               F V K     MV R  G I+                 NI             N Y 
Sbjct: 123 LTSLFNVTKQVIDGMVERGWGRII-----------------NISSVNGQKGQFGQTN-YS 164

Query: 185 VSKFGILGLVKSLAAELGRYGIRVDCVS-------HTYGL------AMAEAI-------- 223
            +K GI G   SLA E+   G+ V+ VS           +       +   I        
Sbjct: 165 TAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSP 224

Query: 224 ASIANAALYNMAKDDDTSYVGKQNLLVNGG 253
             I +   + +A  +++ +    +  +NGG
Sbjct: 225 DEIGSIVAW-LA-SEESGFSTGADFSLNGG 252

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  109 bits (274), Expect = 6e-29
 Identities = 67/271 (24%), Positives = 100/271 (36%), Gaps = 69/271 (25%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG----QALADKLGHQDVCYIH 79
              RVA +TGG  G+GA+ ++  H  G  V ++  + N             G     Y  
Sbjct: 23  QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAY-A 81

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVN-SGC---NLEYRGFVSILDTPKSDLERLLAVN 135
            DV++        +  +A FGK+D+L+N +G              +   K D + ++  +
Sbjct: 82  VDVADFESCERCAEKVLADFGKVDVLINNAGITRDAT-------FMKMTKGDWDAVMRTD 134

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-----------ANYYG 184
               F V K     MV RR G I+                 NI            AN Y 
Sbjct: 135 LDAMFNVTKQFIAGMVERRFGRIV-----------------NIGSVNGSRGAFGQAN-YA 176

Query: 185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTY-GLAMAEAIAS------------------ 225
            +K GI G  K+LA E  + GI V+ VS  Y   AM EA+                    
Sbjct: 177 SAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGR 236

Query: 226 ---IANAALYNMAKDDDTSYVGKQNLLVNGG 253
              +A    + +   DD  +V   +L +NGG
Sbjct: 237 PDEVAALIAF-LC-SDDAGFVTGADLAINGG 265

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  108 bits (271), Expect = 1e-28
 Identities = 57/276 (20%), Positives = 105/276 (38%), Gaps = 72/276 (26%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-------------ADVQDNLGQALADK 69
            L+G+VA++TG + GIG + A+    +GA V I              ++Q N G A +  
Sbjct: 4   MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFS-- 61

Query: 70  LGHQDVCYIHCDVSNEREVINLVDTTVAKF------GKLDILVNSGCNLEYRGFVSILDT 123
                   I  ++ +   V  L  +   +        K DIL+N   N        I +T
Sbjct: 62  --------IGANLESLHGVEALYSSLDNELQNRTGSTKFDILIN---NAGIGPGAFIEET 110

Query: 124 PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-YTTGTGTTACTEIEGLCNIPANY 182
            +   +R+++VN    F + + A   +  R    I+  ++     +            ++
Sbjct: 111 TEQFFDRMVSVNAKAPFFIIQQALSRL--RDNSRIINISSAATRIS----------LPDF 158

Query: 183 --YGVSKFGILGLVKSLAAELGRYGIRVDCVS-----------HTYGLAMAEAIAS---- 225
             Y ++K  I  +  +LA +LG  GI V+ +                  M +   +    
Sbjct: 159 IAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF 218

Query: 226 --------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                   IA+ A + +A   D+ +V  Q + V+GG
Sbjct: 219 NRLGEVEDIADTAAF-LA-SPDSRWVTGQLIDVSGG 252

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  106 bits (266), Expect = 4e-28
 Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 33/226 (14%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQ---DVCYIHC 80
           + +VA+ITG + GIG + A+   ++G  + +     D L + +A +L  +   +V Y H 
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRL-EKIAHELMQEQGVEVFYHHL 59

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DVS    V       + +FG +D++V + G       F  + +  + +   ++ VN +G 
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGLGY----FKRLEELSEEEFHEMIEVNLLGV 115

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
           +   K     +       ++    T   +   I          Y  +K+    LV++   
Sbjct: 116 WRTLKAFLDSLKRTGGLALV---TTSDVSARLIPY-----GGGYVSTKWAARALVRTFQI 167

Query: 200 ELGRYGIRVDCVS----------HTYGLAMAEAI---ASIANAALY 232
           E     +R   +              G    +       IA A   
Sbjct: 168 E--NPDVRFFELRPGAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRC 211

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  104 bits (261), Expect = 3e-27
 Identities = 49/258 (18%), Positives = 94/258 (36%), Gaps = 59/258 (22%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           ++ +  ++   + GIG + A +  + GA+V I        + L  + GH+   Y+ CD+ 
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICAR----NEELLKRSGHR---YVVCDLR 69

Query: 84  NEREVINLVDTTVAKFGKLDILVN------SGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
                   +D    K  ++DILV       +G            +    D +  +    +
Sbjct: 70  ------KDLDLLFEKVKEVDILVLNAGGPKAG---------FFDELTNEDFKEAIDSLFL 114

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
               + ++    M  +  G I+  T     +   IE L          ++  + G +K+L
Sbjct: 115 NMIKIVRNYLPAMKEKGWGRIVAITSFSVIS--PIENLYT-----SNSARMALTGFLKTL 167

Query: 198 AAELGRYGIRVDCV-------SHTYGLAMAEAIAS---------------IANAALYNMA 235
           + E+  YGI V+CV            L   E                   IA+   + + 
Sbjct: 168 SFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAF-LC 226

Query: 236 KDDDTSYVGKQNLLVNGG 253
             +  SY+  Q ++V+GG
Sbjct: 227 -SEKASYLTGQTIVVDGG 243

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  100 bits (252), Expect = 8e-26
 Identities = 32/204 (15%), Positives = 67/204 (32%), Gaps = 24/204 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNLGQALADKLGHQD----V 75
            L   V ++TG + G G + A    +    G+ ++++   +++ + L ++LG Q     V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 76  CYIHCDVSNEREVINLVDTTVAKFG----KLDILVNSGCNLEYRGFVSILDTPKSDLERL 131
                D+  E  V  L+            +  +L+N+   L       +     +++   
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 132 LAVNTIGGFLVAKHAARVMVPRR--RGCILYTT-GTGTTACTEIEGLCNIPANYYGVSKF 188
            A+N      +                 ++  +           +G        Y   K 
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP---YKGW-----GLYCAGKA 174

Query: 189 GILGLVKSLAAELGRYGIRVDCVS 212
               L + LAAE     +RV   +
Sbjct: 175 ARDMLYQVLAAEE--PSVRVLSYA 196

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 99.6 bits (249), Expect = 4e-25
 Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 26/203 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQD----VCY 77
           R + R+A++TG + GIGA+ A+   + G KVV  A    N+ + LA +         +  
Sbjct: 29  RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLIP 87

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
             CD+SNE +++++     ++   +DI +N+ G         ++L    S  + +  VN 
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR----PDTLLSGSTSGWKDMFNVNV 143

Query: 137 IGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLCNIP---ANYYGVSKFGIL 191
           +   +  + A + M  R    G I+      + +     G   +P    ++Y  +K+ + 
Sbjct: 144 LALSICTREAYQSMKERNVDDGHIIN---INSMS-----GHRVLPLSVTHFYSATKYAVT 195

Query: 192 GLVKSLAAELGRYG--IRVDCVS 212
            L + L  EL      IR  C+S
Sbjct: 196 ALTEGLRQELREAQTHIRATCIS 218

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  101 bits (254), Expect = 5e-25
 Identities = 59/258 (22%), Positives = 100/258 (38%), Gaps = 47/258 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G+VA++TG A GIGA+ A++F ++GA VV  DV D   + L           +  DV+
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDV-DGAAEDLKRVADKVGGTALTLDVT 269

Query: 84  NEREVINLVDTTVAKFG-KLDILV-NSGC---NLEYRGFVSILDTPKSDLERLLAVNTIG 138
            +  V  +        G K+DILV N+G     L       + +  +   + ++AVN + 
Sbjct: 270 ADDAVDKITAHVTEHHGGKVDILVNNAGITRDKL-------LANMDEKRWDAVIAVNLLA 322

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--ANYYGVSKFGILGLVKS 196
              + +           G ++          + + G+       N Y  +K G++GL ++
Sbjct: 323 PQRLTEGLVGNGTIGEGGRVIGL--------SSMAGIAGNRGQTN-YATTKAGMIGLAEA 373

Query: 197 LAAELGRYGIRVDCVS---------HTYGLAMAEAIAS------------IANAALYNMA 235
           LA  L   GI ++ V+             LA  E                +A    Y  A
Sbjct: 374 LAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAY-FA 432

Query: 236 KDDDTSYVGKQNLLVNGG 253
               ++ V    + V G 
Sbjct: 433 -SPASNAVTGNTIRVCGQ 449

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 97.0 bits (242), Expect = 6e-25
 Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 33/187 (17%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
               ++ G +  +G++  +   K  A+V+ A      G+   D         +  D++N 
Sbjct: 3   AMKILLIGASGTLGSAVKERLEK-KAEVITA------GRHSGD---------VTVDITNI 46

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
                 +     + GK+D +V+         F  + +         ++    G   +   
Sbjct: 47  DS----IKKMYEQVGKVDAIVS---ATGSATFSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
               +    +G    T  TG      I    +       ++   +    KS A E+ R G
Sbjct: 100 GIDSL--NDKGSFTLT--TGIMMEDPIVQGAS-----AAMANGAVTAFAKSAAIEMPR-G 149

Query: 206 IRVDCVS 212
           IR++ VS
Sbjct: 150 IRINTVS 156

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 99.1 bits (247), Expect = 1e-24
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVV-----IADVQDNLGQALAD--KLGHQDVCY 77
             ++ +ITG +SG G   A+     G +V      I     +  +A+A   +    D+  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DV ++  V   +D  + + G++D+L++   N  +  F             L  +N +
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIH---NAGHMVFGPAEAFTPEQFAELYDINVL 120

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN--YYGVSKFGILGLVK 195
               V + A   M  ++ G +++ + +              P     Y  +K  +  +  
Sbjct: 121 STQRVNRAALPHMRRQKHGLLIWISSSS--------SAGGTPPYLAPYFAAKAAMDAIAV 172

Query: 196 SLAAELGRYGIRVDCV 211
             A EL R+GI    +
Sbjct: 173 QYARELSRWGIETSII 188

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 97.2 bits (243), Expect = 1e-24
 Identities = 33/187 (17%), Positives = 72/187 (38%), Gaps = 19/187 (10%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           + +ITG +SG+GA  A+L+   G    +    +  L   + + L   +V Y   D+++ +
Sbjct: 3   LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLS-NNVGYRARDLASHQ 60

Query: 87  EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA 146
           EV  L +           +V+   +     F  + +     ++ L+  N      V +  
Sbjct: 61  EVEQLFEQL---DSIPSTVVH---SAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 147 ARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYG 205
            +    +    ++      +TA             + Y   K+ + GL++S+  EL    
Sbjct: 115 VKRYKDQPVNVVM----IMSTA-----AQQPKAQESTYCAVKWAVKGLIESVRLELKGKP 165

Query: 206 IRVDCVS 212
           +++  V 
Sbjct: 166 MKIIAVY 172

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 96.4 bits (241), Expect = 2e-24
 Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 17/194 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ--DVCYIH 79
            LQG+VA+ITG +SGIG + A+     GA V I A   + L +AL D+L      V  + 
Sbjct: 4   ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVLE 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DV++ + V   V +TV   G LDILVN   N        + D   +D  R++  N +G 
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVN---NAGIMLLGPVEDADTTDWTRMIDTNLLGL 119

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-EGLCNIPANYYGVSKFGILGLVKSLA 198
             + + A   ++ R +G ++      + A            A  Y  +KFG+    ++L 
Sbjct: 120 MYMTRAALPHLL-RSKGTVV---QMSSIAGRVNVRN-----AAVYQATKFGVNAFSETLR 170

Query: 199 AELGRYGIRVDCVS 212
            E+   G+RV  + 
Sbjct: 171 QEVTERGVRVVVIE 184

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 96.9 bits (242), Expect = 3e-24
 Identities = 43/194 (22%), Positives = 74/194 (38%), Gaps = 15/194 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ-DVCYIHC 80
                   ITG  SG G + A+ F + G  +V+    ++ L QALA +L  +  V  +  
Sbjct: 18  SHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELSAKTRVLPLTL 76

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           DV +   +   VD    +F  L  L+ N+G  L   G          D + ++  N  G 
Sbjct: 77  DVRDRAAMSAAVDNLPEEFATLRGLINNAGLAL---GTDPAQSCDLDDWDTMVDTNIKGL 133

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-EGLCNIPANYYGVSKFGILGLVKSLA 198
               +     ++    G  +     G+ A      G     ++ YG +K  +     +L 
Sbjct: 134 LYSTRLLLPRLIAHGAGASIVN--LGSVAGKWPYPG-----SHVYGGTKAFVEQFSLNLR 186

Query: 199 AELGRYGIRVDCVS 212
            +L   G+RV  + 
Sbjct: 187 CDLQGTGVRVTNLE 200

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 97.0 bits (242), Expect = 3e-24
 Identities = 40/191 (20%), Positives = 77/191 (40%), Gaps = 23/191 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVV-----IADVQDNLGQALADKLGHQDVCYIHCD 81
           +V ++TG +SG G + A+     G  V+        + D     L      +    I  D
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD-----LVAAYPDR-AEAISLD 59

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++   +  +    +A++G++D+LVN   N       +  +T + +L  L  ++  G   
Sbjct: 60  VTDGERIDVVAADVLARYGRVDVLVN---NAGRTQVGAFEETTERELRDLFELHVFGPAR 116

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAE 200
           + +     M  R  G ++  +  G        G  +      Y  +K  +  L + LA E
Sbjct: 117 LTRALLPQMRERGSGSVVNISSFG--------GQLSFAGFSAYSATKAALEQLSEGLADE 168

Query: 201 LGRYGIRVDCV 211
           +  +GI+V  V
Sbjct: 169 VAPFGIKVLIV 179

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 94.9 bits (237), Expect = 4e-24
 Identities = 34/185 (18%), Positives = 74/185 (40%), Gaps = 25/185 (13%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
            +ITG   G+G + A+     G  ++++  +      LA ++G +    +  D+++E E 
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGALAELAREVGAR---ALPADLADELEA 57

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
                  + + G LD+LV+    +   G  S+ +  +  +E +LA + +    V KH   
Sbjct: 58  ----KALLEEAGPLDLLVH---AVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKH--- 107

Query: 149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIR 207
               ++    ++                 +P    Y  +K  +   +++   EL R G+ 
Sbjct: 108 -ARFQKGARAVFFGAYP--------RYVQVPGFAAYAAAKGALEAYLEAARKELLREGVH 158

Query: 208 VDCVS 212
           +  V 
Sbjct: 159 LVLVR 163

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 96.6 bits (241), Expect = 5e-24
 Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 20/199 (10%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNG---AKVVIA----DVQDNLGQALADKLGHQDV 75
           RL  +  +ITG ++GIG + A  + +      K+++A    +  + L + +  +  +  V
Sbjct: 30  RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKV 89

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVN-SGCNLEYRGFVSILDTPKSDLERLLAV 134
                D++   ++   ++    +F  +DILVN +G  L   G   +      D++ +   
Sbjct: 90  HVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKAL---GSDRVGQIATEDIQDVFDT 146

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-EGLCNIPANYYGVSKFGILGL 193
           N      + +    +   +  G I+     G+ A  +          + Y  SKF +   
Sbjct: 147 NVTALINITQAVLPIFQAKNSGDIV---NLGSIAGRDAYPT-----GSIYCASKFAVGAF 198

Query: 194 VKSLAAELGRYGIRVDCVS 212
             SL  EL    IRV  ++
Sbjct: 199 TDSLRKELINTKIRVILIA 217

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 95.7 bits (239), Expect = 6e-24
 Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 16/188 (8%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           + ++TG  +G G    + F + G KV+     Q+ L Q L D+LG   +     DV N  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELGDN-LYIAQLDVRNRA 59

Query: 87  EVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
            +  ++ +  A++  +DILV N+G  L   G          D E ++  N  G   + + 
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLAL---GMEPAHKASVEDWETMIDTNNKGLVYMTRA 116

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEI-EGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
               MV R  G I+     G+TA +    G      N YG +K  +     +L  +L   
Sbjct: 117 VLPGMVERNHGHII---NIGSTAGSWPYAG-----GNVYGATKAFVRQFSLNLRTDLHGT 168

Query: 205 GIRVDCVS 212
            +RV  + 
Sbjct: 169 AVRVTDIE 176

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 95.7 bits (239), Expect = 8e-24
 Identities = 39/194 (20%), Positives = 79/194 (40%), Gaps = 22/194 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCD 81
               ++ +ITG +SGIG + A+ F + G  +++ A   + L +AL       +      D
Sbjct: 13  GSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-KALNL----PNTLCAQVD 67

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCN--LEYRGFVSILDTPKSDLERLLAVNTIGG 139
           V+++      +      +G  D +VN   N  +   G +   +   ++ +R+  VN +G 
Sbjct: 68  VTDKYTFDTAITRAEKIYGPADAIVN---NAGMMLLGQIDTQEA--NEWQRMFDVNVLGL 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLA 198
               +     M  R  G I+      + A     G    P    Y  +KF +  + +++ 
Sbjct: 123 LNGMQAVLAPMKARNCGTII---NISSIA-----GKKTFPDHAAYCGTKFAVHAISENVR 174

Query: 199 AELGRYGIRVDCVS 212
            E+    +RV  ++
Sbjct: 175 EEVAASNVRVMTIA 188

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 94.9 bits (237), Expect = 1e-23
 Identities = 48/193 (24%), Positives = 80/193 (41%), Gaps = 18/193 (9%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQ--DVCYIHC 80
           +  +V +ITG + GIG   A+     GAK+++ A  Q  + +A+A ++            
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV++   V       V  +G++D+LVN   N        +      + ER++ VN  G  
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVN---NAGVMPLSPLAAVKVDEWERMIDVNIKGVL 117

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAA 199
                   +M  +R G I+     G+        L  +P A  Y  +KF +  +   L  
Sbjct: 118 WGIGAVLPIMEAQRSGQII---NIGSIG-----ALSVVPTAAVYCATKFAVRAISDGLRQ 169

Query: 200 ELGRYGIRVDCVS 212
           E     IRV CV+
Sbjct: 170 E--STNIRVTCVN 180

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 86.7 bits (215), Expect = 5e-20
 Identities = 46/195 (23%), Positives = 75/195 (38%), Gaps = 24/195 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAK--VVIA------DVQDNLGQALADKLGHQDVCYI 78
            V +ITG +SGIG   A     + ++   V A              A A       +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL-DTPKSDLERLLAVNTI 137
             DV + + V    +      G++D+LV    N    G +  L    +  +  +L VN +
Sbjct: 63  QLDVRDSKSVAAARER--VTEGRVDVLVC---NAGL-GLLGPLEALGEDAVASVLDVNVV 116

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKS 196
           G   + +     M  R  G +L            + GL  +P N  Y  SKF + GL +S
Sbjct: 117 GTVRMLQAFLPDMKRRGSGRVLV--------TGSVGGLMGLPFNDVYCASKFALEGLCES 168

Query: 197 LAAELGRYGIRVDCV 211
           LA  L  +G+ +  +
Sbjct: 169 LAVLLLPFGVHLSLI 183

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 84.2 bits (208), Expect = 3e-19
 Identities = 49/264 (18%), Positives = 81/264 (30%), Gaps = 69/264 (26%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GH 72
           P        + R A++TGG  GIG    +    NG  VV+       G    +KL    H
Sbjct: 2   PETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH 61

Query: 73  QDVCYIHCDVSNEREVI-NLVDTTVAKFGKLDILVNSG---------------------- 109
           ++V +   DV++    + +L D     FGKLDILVN+                       
Sbjct: 62  ENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGED 121

Query: 110 -----CNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-YTTG 163
                   E      ++       E  L +N  G   V +    ++       I+  ++ 
Sbjct: 122 SEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSS 181

Query: 164 TGTTACTE---------------IEGLCNIPANY--------------------YGVSKF 188
           TG+                     E +  +                        Y  SK 
Sbjct: 182 TGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKA 241

Query: 189 GILGLVKSLAAELGRYGIRVDCVS 212
            +    + LA ++     +V+CV 
Sbjct: 242 CLNAYTRVLANKIP--KFQVNCVC 263

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 76.2 bits (188), Expect = 9e-17
 Identities = 36/202 (17%), Positives = 70/202 (34%), Gaps = 20/202 (9%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKV-VIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
              ++TG   GIG    Q   K+     +IA  +D         +    V  +   V+ +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 86  REVINLVDTTVAKFG--KLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + +   V       G   L +L+ N+G       + +  +  ++ +   L VNT    L+
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGV---LLSYGTNTEPNRAVIAEQLDVNTTSVVLL 120

Query: 143 AKH-----------AARVMVPRRRGCILY-TTGTGTTACTEIEGLCNIPANYYGVSKFGI 190
            +             +   +   R  ++  ++G G+       G    P   Y +SK  I
Sbjct: 121 TQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT-SGSAQFPVLAYRMSKAAI 179

Query: 191 LGLVKSLAAELGRYGIRVDCVS 212
               ++LA +L    + V    
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFC 201

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 73.0 bits (180), Expect = 2e-15
 Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 61/218 (27%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L+GR  ++ G A+   I    A+  H+ GA+++     + L      LA  L   D   +
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDV+N+ E+     +   + G +  + +            I    K +L          
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAH-----------CIAFANKEELVGEYLNTNRD 113

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG-- 184
           GFL            V K A  +M     G I+  T                   Y G  
Sbjct: 114 GFLLAHNISSYSLTAVVKAARPMM--TEGGSIVTLT-------------------YLGGE 152

Query: 185 --VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
             +  + ++G+ K+        LAA+LG+  IRV+ +S
Sbjct: 153 LVMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSIS 190

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 72.7 bits (179), Expect = 3e-15
 Identities = 47/218 (21%), Positives = 80/218 (36%), Gaps = 61/218 (27%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L+ +  +I G A+   I    A++  + GAK+V    ++      + L ++L   +    
Sbjct: 30  LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 89

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV ++ EVIN  +      G +D + +           SI      DL    +  +  
Sbjct: 90  QIDVQSDEEVINGFEQIGKDVGNIDGVYH-----------SIAFANMEDLRGRFSETSRE 138

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS 186
           GFL            VA  A ++M     G I+ TT                   Y G  
Sbjct: 139 GFLLAQDISSYSLTIVAHEAKKLM--PEGGSIVATT-------------------YLGGE 177

Query: 187 K----FGILGLVKS--------LAAELGRYGIRVDCVS 212
                + ++G+ K+        LA +LG   IRV+ +S
Sbjct: 178 FAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAIS 215

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 71.6 bits (176), Expect = 6e-15
 Identities = 35/124 (28%), Positives = 49/124 (39%), Gaps = 14/124 (11%)

Query: 26  GRVAIITGGASGIG-ASAAQLFHKNGAKVVIA--DVQDNLGQALADKL--GHQDVCYIHC 80
             VA++TGG  GIG A    L       VV+   DV    GQA   +L        +   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVT--RGQAAVQQLQAEGLSPRFHQL 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSD-LERLLAVNTIG 138
           D+ + + +  L D    ++G LD+LV N+G       F     TP     E  +  N  G
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGI-----AFKVADPTPFHIQAEVTMKTNFFG 116

Query: 139 GFLV 142
              V
Sbjct: 117 TRDV 120

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 69.9 bits (172), Expect = 2e-14
 Identities = 45/219 (20%), Positives = 77/219 (35%), Gaps = 64/219 (29%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L G+  ++TG AS   I    AQ  H+ GA++      D L    +  A +LG   V  +
Sbjct: 7   LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV--L 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE-RLLAVNTI 137
            CDV+ +  +  +       + K D  V+           SI   P   L+   +   T 
Sbjct: 65  QCDVAEDASIDTMFAELGKVWPKFDGFVH-----------SIGFAPGDQLDGDYVNAVTR 113

Query: 138 GGFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG- 184
            GF             +AK    ++       +L  +                   Y G 
Sbjct: 114 EGFKIAHDISSYSFVAMAKACRSML--NPGSALLTLS-------------------YLGA 152

Query: 185 ---VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
              +  + ++GL K+        +A  +G  G+RV+ +S
Sbjct: 153 ERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAIS 191

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 68.8 bits (169), Expect = 6e-14
 Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 63/218 (28%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           LQG+  +I G A+   I    A+   + GA++      D L    + LA++LG       
Sbjct: 29  LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVA--G 86

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           HCDV++   +  + +T   K+GKLD LV+           +I  + K +L       +  
Sbjct: 87  HCDVADAASIDAVFETLEKKWGKLDFLVH-----------AIGFSDKDELTGRYIDTSEA 135

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG-- 184
            F             V++ A ++M     G IL  T                   YYG  
Sbjct: 136 NFTNTMLISVYSLTAVSRRAEKLM--ADGGSILTLT-------------------YYGAE 174

Query: 185 --VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
             +  + ++G+ K+        LA +LG   IRV+ +S
Sbjct: 175 KVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAIS 212

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 68.4 bits (168), Expect = 8e-14
 Identities = 48/235 (20%), Positives = 93/235 (39%), Gaps = 63/235 (26%)

Query: 7   SLKIDNNILPTLSSYYRLQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG- 63
           +L+       ++ +   ++G+  +I G A+   +    A+     GA+V +  + +    
Sbjct: 11  TLEAQTQGPGSMRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKK 70

Query: 64  --QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSIL 121
               LA+ LG +    + CDVS+   V N+      ++G LD +V+           ++ 
Sbjct: 71  RVDPLAESLGVKLT--VPCDVSDAESVDNMFKVLAEEWGSLDFVVH-----------AVA 117

Query: 122 DTPKSDLERLLAVNTIGGFL------------VAKHAARVMVPRRRGCILYTTGTGTTAC 169
            + K++L+      ++G FL            +A  A  +M     G IL  +       
Sbjct: 118 FSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLM--TNGGSILTLS------- 168

Query: 170 TEIEGLCNIPANYYG----VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
                       YYG    V  + ++G+ K+        LA +LG+  IRV+ +S
Sbjct: 169 ------------YYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAIS 211

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 47/219 (21%), Positives = 79/219 (36%), Gaps = 64/219 (29%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIA---DVQDNLGQALADKLGHQDVCYI 78
           L G+  +ITG  S   I    A+  H+ GA++        +D + + L  +     V  +
Sbjct: 24  LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRV-EKLCAEFNPAAV--L 80

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE-RLLAVNTI 137
            CDV +++E+ +L       +  LD +V+           SI   P+  LE   +   T 
Sbjct: 81  PCDVISDQEIKDLFVELGKVWDGLDAIVH-----------SIAFAPRDQLEGNFIDCVTR 129

Query: 138 GGFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG- 184
            GF             +AK    +M   R   ++  T                   Y G 
Sbjct: 130 EGFSIAHDISAYSFAALAKEGRSMM-KNRNASMVALT-------------------YIGA 169

Query: 185 ---VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
              +  +  +G+ K+         A  LG  GI+V+ VS
Sbjct: 170 EKAMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVS 208

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 68.0 bits (167), Expect = 1e-13
 Identities = 45/219 (20%), Positives = 76/219 (34%), Gaps = 64/219 (29%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L G+  ++TG  S   I    A+   + GA++    V D         A + G + V   
Sbjct: 12  LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELV--F 69

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLE-RLLAVNTI 137
            CDV+++ ++  L  +    +  LD LV+           SI   P+  +    L   T 
Sbjct: 70  PCDVADDAQIDALFASLKTHWDSLDGLVH-----------SIGFAPREAIAGDFLDGLTR 118

Query: 138 GGFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV 185
             F             +AK A  ++       +L  +                   Y G 
Sbjct: 119 ENFRIAHDISAYSFPALAKAALPML--SDDASLLTLS-------------------YLGA 157

Query: 186 SK----FGILGLVKS--------LAAELGRYGIRVDCVS 212
            +    +  +GL K+        LA  LG  G+RV+ +S
Sbjct: 158 ERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAIS 196

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 62/218 (28%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L+G+ A+ITG A+   I    A+ FH+ GA++        L    + +A   G   V  +
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV--V 76

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDVS + ++ NL       +G LDI+V+           SI   PK + +  +   +  
Sbjct: 77  KCDVSLDEDIKNLKKFLEENWGSLDIIVH-----------SIAYAPKEEFKGGVIDTSRE 125

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG-- 184
           GF             + +    +M   R G I+  +                   YYG  
Sbjct: 126 GFKIAMDISVYSLIALTRELLPLM-EGRNGAIVTLS-------------------YYGAE 165

Query: 185 --VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
             V  + ++G+ K+        LA ++ ++G R++ +S
Sbjct: 166 KVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAIS 203

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 66.8 bits (164), Expect = 2e-13
 Identities = 49/218 (22%), Positives = 83/218 (38%), Gaps = 63/218 (28%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L G+ A++ G  +   +G + A    + GA+V ++   + L    + LA+ LG   +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALL--F 63

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV+ + E+  L       FG LD LV+           +I   P+  +E         
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVH-----------AIAFAPREAMEGRYIDTRRQ 112

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG-- 184
            +L            VA+ A  ++  R  G I+  T                   YY   
Sbjct: 113 DWLLALEVSAYSLVAVARRAEPLL--REGGGIVTLT-------------------YYASE 151

Query: 185 --VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
             V K+ ++ + K+        LA ELG  G+RV+ +S
Sbjct: 152 KVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAIS 189

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 66.8 bits (164), Expect = 3e-13
 Identities = 44/218 (20%), Positives = 78/218 (35%), Gaps = 63/218 (28%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDVCYI 78
           L+G+  +I G A+   I    AQ     GA +    + ++L    + +A +L    V   
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV--Y 61

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS E    +L ++     G LD +V+           S+   PK  LE  L   +  
Sbjct: 62  ELDVSKEEHFKSLYNSVKKDLGSLDFIVH-----------SVAFAPKEALEGSLLETSKS 110

Query: 139 GFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG-- 184
            F             +      ++       +L  +                   Y G  
Sbjct: 111 AFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLS-------------------YLGST 149

Query: 185 --VSKFGILGLVKS--------LAAELGRYGIRVDCVS 212
             ++ + ++GL K+        LA +LG++ IRV+ +S
Sbjct: 150 KYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALS 187

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 66.2 bits (162), Expect = 4e-13
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 17/200 (8%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKV--VIADVQDNLGQALADKLG--HQDVCYIHCDV 82
              +ITG   G+G    +           +    ++       + L   H ++  +  D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 83  SNEREVINLVDT--TVAKFGKLDILV-NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            N      LV     V K   L++L  N+G   +      I      +L   L  NT+  
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSA---RITAVRSQELLDTLQTNTVVP 138

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTG-------TTACTEIEGLCNIPANYYGVSKFGILG 192
            ++AK    ++    +       G G       ++    I+G  +     Y  SK  +  
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 198

Query: 193 LVKSLAAELGRYGIRVDCVS 212
             KSL+ +L    I    + 
Sbjct: 199 ATKSLSVDLYPQRIMCVSLH 218

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 63.4 bits (155), Expect = 5e-12
 Identities = 43/209 (20%), Positives = 80/209 (38%), Gaps = 43/209 (20%)

Query: 24  LQGRVAIITGGASG--IGASAAQLFHKNGAKVVIADVQDN-LGQALADKLGHQDVCYIHC 80
           L G+  +++G  +   I    A++  + GA++V+       L Q + D+L       +  
Sbjct: 5   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLEL 63

Query: 81  DVSNEREVINLVDTTVAKFG---KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNT- 136
           DV NE  + +L        G   KLD +V+S           I   P++ +      +  
Sbjct: 64  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHS-----------IGFMPQTGMGINPFFDAP 112

Query: 137 IGGFL------------VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA-NYY 183
                            +AK    +M     G I+      + A         +PA N+ 
Sbjct: 113 YADVSKGIHISAYSYASMAKALLPIM--NPGGSIVGMDFDPSRA---------MPAYNWM 161

Query: 184 GVSKFGILGLVKSLAAELGRYGIRVDCVS 212
            V+K  +  + + +A E G+YG+R + V+
Sbjct: 162 TVAKSALESVNRFVAREAGKYGVRSNLVA 190

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 59.2 bits (144), Expect = 1e-10
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
               R  +ITG  SG+GA  A+   + GA V++A      G+A A  +    V     D+
Sbjct: 13  SFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-GQVEVRELDL 71

Query: 83  SNEREVINLVDTTVAKFGKLDILVN 107
            +   V    D         D+L+N
Sbjct: 72  QDLSSVRRFAD----GVSGADVLIN 92

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 55.3 bits (133), Expect = 3e-09
 Identities = 17/87 (19%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-DVCYIHCDV 82
           ++G+ A++  G   +G  +A L    GA+VV+   + +  QA AD +  +  V     + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSG 109
           +++      V            +  +G
Sbjct: 177 ADDASRAEAVKGA-------HFVFTAG 196

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 48.6 bits (116), Expect = 6e-07
 Identities = 41/232 (17%), Positives = 76/232 (32%), Gaps = 58/232 (25%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQA---------------- 65
           L+G+ A + G A   G G + A+     GA+V +      LG                  
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 66  ------------LADKLGHQDVCYIHCDVSNEREVINLVDTTV--------AKFGKLDIL 105
                       L       +   +  D+ + +    +   T+           G +DIL
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPED--VPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDIL 124

Query: 106 VNSGCNL-EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT 164
           V+S  N  E      +L+T +       + +      + +H   +M     G  +  +  
Sbjct: 125 VHSLANGPEVTK--PLLETSRKGYLAASSNSAYSFVSLLQHFGPIM--NEGGSAVTLSYL 180

Query: 165 GTTACTEIEGLCNIPANYY---GVSKFGILGLVKSLAAELG-RYGIRVDCVS 212
                        +P  Y      +K  +    ++LA E G +YG+RV+ +S
Sbjct: 181 AAERV--------VP-GYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAIS 223

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 44/232 (18%), Positives = 76/232 (32%), Gaps = 58/232 (25%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQA---------------- 65
           L+G+ A I G A   G G + A+     GA++++      L                   
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 66  ------------LADKLGHQDVCYIHCDV--------SNEREVINLVDTTVAKFGKLDIL 105
                       L     + +   +  DV        S+   V    +     FG +DIL
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPED--VPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDIL 123

Query: 106 VNSGCNL-EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT 164
           V+S  N  E      +L+T +      ++ ++     +  H   +M     G  +  T  
Sbjct: 124 VHSLANGPEVSK--PLLETSRKGYLAAISASSYSFVSLLSHFLPIM--NPGGASISLTYI 179

Query: 165 GTTACTEIEGLCNIPANY---YGVSKFGILGLVKSLAAELG-RYGIRVDCVS 212
            +           IP  Y      +K  +    + LA E G +  IRV+ +S
Sbjct: 180 ASERI--------IP-GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 222

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 42/245 (17%), Positives = 78/245 (31%), Gaps = 71/245 (28%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQA---------------- 65
           L+G+ A + G A   G G +  +L    GA+V++                          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 66  -------------------------LADKLGHQDVCYIHCDVSNEREVINLVDTTV---- 96
                                    L           +  +VS+ +    +   T+    
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQD--VPPEVSSNKRYAGVGGFTISEVA 124

Query: 97  ----AKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV 151
               A  G++DILV+S     E      +L T +      ++ ++     + +H   +M 
Sbjct: 125 EAVRADVGQIDILVHSLANGPEVTK--PLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLM- 181

Query: 152 PRRRGCILYTTGTGTTACTEIEGLCNIPANYY---GVSKFGILGLVKSLAAELGR-YGIR 207
            +  G  L  +   +           IP  Y      +K  +    ++LA E GR   +R
Sbjct: 182 -KEGGSALALSYIASEKV--------IP-GYGGGMSSAKAALESDCRTLAFEAGRARAVR 231

Query: 208 VDCVS 212
           V+C+S
Sbjct: 232 VNCIS 236

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A Length = 450

 Score = 41.1 bits (95), Expect = 2e-04
 Identities = 15/81 (18%), Positives = 32/81 (39%), Gaps = 11/81 (13%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
            V ++  G+  +      +   +G KV +A       + L+   G Q    I  DV+++ 
Sbjct: 5   SVLML--GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA--GVQHSTPISLDVNDDA 60

Query: 87  EVINLVDTTVAKFGKLDILVN 107
            +   V        K D++++
Sbjct: 61  ALDAEVA-------KHDLVIS 74

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 40.3 bits (94), Expect = 3e-04
 Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 54/228 (23%)

Query: 26  GRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLG---QALADKLGHQDV----- 75
             +  I G     G G   A+   K   K++            +   +     D+     
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 76  --------------------------CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSG 109
                                          ++     + ++ +    K+GK+++LV+S 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 110 CNL-EYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA 168
            N  E +    +L+T +      L+ ++     + K+   +M P  +  I+  T   +  
Sbjct: 122 ANAKEVQK--DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--QSSIISLTYHASQK 177

Query: 169 CTEIEGLCNIPANYY---GVSKFGILGLVKSLAAELGR-YGIRVDCVS 212
                    +P  Y      +K  +    + LA  LGR Y IR++ +S
Sbjct: 178 V--------VP-GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTIS 216

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.98
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.97
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.97
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.97
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.97
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.96
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.95
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.94
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.93
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.92
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.92
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.9
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.9
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.9
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.9
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.9
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.9
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.89
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.89
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.89
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.89
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.89
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.88
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.88
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.88
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.88
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.88
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.88
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.88
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.87
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.87
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.87
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.87
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.86
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.86
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.86
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.86
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.86
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.86
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.85
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.85
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.85
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.85
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.85
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.85
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.84
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.84
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.84
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.84
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.84
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.84
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.84
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.84
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.83
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.83
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.83
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.83
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.83
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.83
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.83
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.83
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.81
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.81
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.81
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.8
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.8
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.8
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.8
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.79
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.79
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.79
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.79
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.78
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.78
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.77
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.77
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.76
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.76
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.75
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.74
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.74
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.74
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.74
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.73
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.73
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.71
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.68
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.68
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.67
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.66
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.65
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.61
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.59
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.59
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.57
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.56
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.56
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.54
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.54
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.51
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.35
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.28
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.21
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.03
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.88
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.85
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.71
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.65
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.58
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.52
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.51
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.51
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.5
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.5
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.48
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.4
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.31
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.31
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.28
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.28
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.26
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.23
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.21
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.19
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.16
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.15
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.12
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.07
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.01
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.96
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.95
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.9
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.88
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.87
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	97.86
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.83
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.82
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.79
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.78
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.78
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.77
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.73
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.72
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	97.7
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.68
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.67
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.66
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.65
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.63
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.63
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.63
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.58
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.55
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.52
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.51
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.5
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.49
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.48
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.47
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.43
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.42
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.41
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.4
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.37
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.36
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.28
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.24
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.2
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.19
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.19
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.14
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.13
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.12
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.06
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.05
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.98
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.97
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.93
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	96.92
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	96.92
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	96.89
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.86
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.86
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.82
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.78
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.77
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.75
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.74
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.74
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.73
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.72
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.7
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.68
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.66
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.66
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.64
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.63
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	96.6
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.6
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.6
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.56
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.56
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.55
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.53
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	96.5
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.49
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	96.47
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.44
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.43
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.43
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.41
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.4
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.39
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.38
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.33
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.32
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	96.31
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.28
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.23
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	96.19
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	96.18
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	96.17
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.17
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	96.16
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.14
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	96.14
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.11
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.09
1lnq_A	336	MTHK channels, potassium channel related protein;	96.03
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	95.97
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.94
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.92
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.89
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.86
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	95.83
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	95.79
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	95.77
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	95.76
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.75
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	95.74
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	95.73
3tri_A	280	Pyrroline-5-carboxylate reductase; amino acid bios	95.72
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	95.72
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	95.67
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	95.66
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.64
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.53
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.53
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	95.51
3ggd_A	245	SAM-dependent methyltransferase; YP_325210.1, stru	95.5
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	95.49
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	95.47
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	95.46
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	95.46
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.41
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.39
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	95.38
3qha_A	296	Putative oxidoreductase; seattle structural genomi	95.37
3dtt_A	245	NADP oxidoreductase; structural genomics, joint ce	95.36
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	95.35
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	95.35
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.33
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	95.32
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	95.31
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	95.29
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	95.28
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	95.28
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	95.27
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	95.26
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.23
4g65_A	461	TRK system potassium uptake protein TRKA; structur	95.21
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.16
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.12
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.1
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.01
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.99
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.99
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	94.94
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	94.88
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.8
2vns_A	215	Metalloreductase steap3; metal-binding, transmembr	94.76
4e21_A	358	6-phosphogluconate dehydrogenase (decarboxylating;	94.75
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	94.73

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.7e-55  Score=363.41  Aligned_cols=224  Identities=28%  Similarity=0.464  Sum_probs=201.9

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++++|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++  ..++.++++|++|+++++++++++.+
T Consensus         1 Sy~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   80 (254)
T 4fn4_A            1 SYQSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFE   80 (254)
T ss_dssp             CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999998888887764  25789999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++|+||+||||||....  ..++.+.+.++|++++++|+.++|+++|+++|+|+++++|+|||+||.    .+..+.+..
T Consensus        81 ~~G~iDiLVNNAGi~~~--~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~----~g~~~~~~~  154 (254)
T 4fn4_A           81 TYSRIDVLCNNAGIMDG--VTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASI----AGIRGGFAG  154 (254)
T ss_dssp             HHSCCCEEEECCCCCCT--TCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTCSSSSC
T ss_pred             HcCCCCEEEECCcccCC--CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEech----hhcCCCCCC
Confidence            99999999999986532  356888999999999999999999999999999999899999999944    444444444


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAAL  231 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~  231 (255)
                         .+|++||+|+.+|||+||.|++++|||||+|+| |.++|+                        ++  |||++.+++
T Consensus       155 ---~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~  230 (254)
T 4fn4_A          155 ---APYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLP-GTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIV  230 (254)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe-CCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence               679999999999999999999999999999999 888775                        12  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +|++++|+|||+|.|||||+
T Consensus       231 fL--aSd~a~~iTG~~i~VDGG~t  252 (254)
T 4fn4_A          231 FL--ASDEASFVNGDAVVVDGGLT  252 (254)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCchhcCCcCCEEEeCCCcc
Confidence            99  99999999999999999985

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.4e-53  Score=352.16  Aligned_cols=221  Identities=23%  Similarity=0.331  Sum_probs=198.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++||+++||||++|||++++++|+++|++|++++|+++.+++..+++.  ..++.++++|++|+++++++++++.+++
T Consensus         5 f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (255)
T 4g81_D            5 FDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEG   84 (255)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            47899999999999999999999999999999999999988888777664  2578899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |+||+||||||...   ..++.+.+.++|++++++|+.++|+++|+++|+|.+ +++|+|||+||.    .+..+.+.. 
T Consensus        85 G~iDiLVNNAG~~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~----~~~~~~~~~-  156 (255)
T 4g81_D           85 IHVDILINNAGIQY---RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL----TSQAARPTV-  156 (255)
T ss_dssp             CCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG----GGTSBCTTC-
T ss_pred             CCCcEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh----hhcCCCCCc-
Confidence            99999999998654   367889999999999999999999999999999965 467999999944    444444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        .+|++||+|+.+|||+||.|++++|||||+|+| |.++|+                      ++  |+|++.+++|| 
T Consensus       157 --~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL-  232 (255)
T 4g81_D          157 --APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGP-GYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFL-  232 (255)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHH-
T ss_pred             --hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH-
Confidence              679999999999999999999999999999999 888776                      12  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|++++|+|||+|.|||||.
T Consensus       233 -~S~~a~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          233 -SSKASDYINGQIIYVDGGWL  252 (255)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hCchhCCCcCCEEEECCCeE
Confidence             99999999999999999984

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=4.2e-52  Score=346.29  Aligned_cols=217  Identities=24%  Similarity=0.374  Sum_probs=196.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.+++..++++ .++.++++|++|+++++++++++.+++|+|
T Consensus        26 rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i  104 (273)
T 4fgs_A           26 RLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-GGAVGIQADSANLAELDRLYEKVKAEAGRI  104 (273)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred             hhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5899999999999999999999999999999999999999998888886 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++  .|+||++||.    .+..+.+..   ..
T Consensus       105 DiLVNNAG~~~---~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~--~G~IInisS~----~~~~~~~~~---~~  172 (273)
T 4fgs_A          105 DVLFVNAGGGS---MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR--GSSVVLTGST----AGSTGTPAF---SV  172 (273)
T ss_dssp             EEEEECCCCCC---CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEECCG----GGGSCCTTC---HH
T ss_pred             CEEEECCCCCC---CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCeEEEEeeh----hhccCCCCc---hH
Confidence            99999988654   367889999999999999999999999999999964  5889999944    344444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------H---h--HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------E---A--IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~---~--~~~~~~~~~~l  233 (255)
                      |++||+|+.+|||+||.|++++|||||+|+| |.++|+                        |   +  |||++.+++||
T Consensus       173 Y~asKaav~~ltr~lA~Ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FL  251 (273)
T 4fgs_A          173 YAASKAALRSFARNWILDLKDRGIRINTLSP-GPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFL  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSCEEEEEEEE-CSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999 877765                        1   2  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +|++++|+|||+|.||||++
T Consensus       252 --aSd~a~~iTG~~i~VDGG~s  271 (273)
T 4fgs_A          252 --ASDDSSFVTGAELFVDGGSA  271 (273)
T ss_dssp             --HSGGGTTCCSCEEEESTTTT
T ss_pred             --hCchhcCccCCeEeECcChh
Confidence              99999999999999999985

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=9.6e-52  Score=342.37  Aligned_cols=219  Identities=25%  Similarity=0.308  Sum_probs=190.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-GHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++|+||+++||||++|||++++++|+++|++|++++|+++..+...+.. ...++.++.+|++|+++++++++++.+++|
T Consensus         3 ~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G   82 (258)
T 4gkb_A            3 LNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFG   82 (258)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6799999999999999999999999999999999999987644332211 125788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +||+||||||...    ....+.+.++|++++++|+.++++++|+++|+|+++ +|+|||+||.    .+..+.+..   
T Consensus        83 ~iDiLVNnAGi~~----~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~IVnisS~----~~~~~~~~~---  150 (258)
T 4gkb_A           83 RLDGLVNNAGVND----GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT-RGAIVNISSK----TAVTGQGNT---  150 (258)
T ss_dssp             CCCEEEECCCCCC----CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCT----HHHHCCSSC---
T ss_pred             CCCEEEECCCCCC----CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEeeh----hhccCCCCc---
Confidence            9999999998654    233477999999999999999999999999999654 5999999954    334444444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAAL  231 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~~  231 (255)
                      ..|++||+|+.+|||++|.|++++|||||+|+| |.++|+                           ++  |||++.+++
T Consensus       151 ~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~  229 (258)
T 4gkb_A          151 SGYCASKGAQLALTREWAVALREHGVRVNAVIP-AEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAV  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            679999999999999999999999999999999 777764                           22  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +|++++|+|||+|.|||||+
T Consensus       230 fL--aS~~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          230 FL--LSPRASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTTT
T ss_pred             HH--hCchhcCccCCeEEECCCcc
Confidence            99  99999999999999999985

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=2e-51  Score=336.42  Aligned_cols=216  Identities=23%  Similarity=0.304  Sum_probs=185.9

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .++|+||+++||||++|||++++++|+++|++|++++|+... ..+..++. ..++.++++|++|+++++++++     +
T Consensus         4 ~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~-g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            4 PFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKD-GGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             CcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHh-CCcEEEEEccCCCHHHHHHHHH-----h
Confidence            368999999999999999999999999999999999998642 22222222 3578999999999998877654     4


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      |++|+||||||...   ..++.+.+.++|++++++|+.++|+++|+++|+|.+++ .|+|||+||.    .+..+.++. 
T Consensus        78 g~iDiLVNNAGi~~---~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~----~~~~g~~~~-  149 (247)
T 4hp8_A           78 AGFDILVNNAGIIR---RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASL----LSFQGGIRV-  149 (247)
T ss_dssp             TCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG----GGTSCCSSC-
T ss_pred             CCCCEEEECCCCCC---CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEech----hhCCCCCCC-
Confidence            79999999998764   36788899999999999999999999999999997664 6999999954    444444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~  234 (255)
                        .+|++||+++.+|||+||.||+++|||||+|+| |.++|+                   |   +  |||++.+++|| 
T Consensus       150 --~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~P-G~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fL-  225 (247)
T 4hp8_A          150 --PSYTAAKHGVAGLTKLLANEWAAKGINVNAIAP-GYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFL-  225 (247)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHH-
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee-CCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH-
Confidence              679999999999999999999999999999999 888876                   1   2  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|++++|+|||+|.|||||.
T Consensus       226 -aSd~a~~iTG~~i~VDGG~~  245 (247)
T 4hp8_A          226 -SSAAADYVHGAILNVDGGWL  245 (247)
T ss_dssp             -TSGGGTTCCSCEEEESTTGG
T ss_pred             -hCchhcCCcCCeEEECcccc
Confidence             99999999999999999984

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=3.6e-50  Score=330.27  Aligned_cols=211  Identities=22%  Similarity=0.403  Sum_probs=187.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|++|||||++|||++++++|+++|++|++++|+++..+++.++.  .++.++++|++|+++++++++++.+++|+||+|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER--PNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTC--TTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--CCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            699999999999999999999999999999999988887777653  478899999999999999999999999999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      |||||...   ..++.+.+.++|++++++|+.++++++|+++|+|+++ +|+|||+||.    .+..+.+..   .+|++
T Consensus        80 VNNAG~~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~-~G~IInisS~----~~~~~~~~~---~~Y~a  148 (247)
T 3ged_A           80 VNNACRGS---KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN-KGRIINIAST----RAFQSEPDS---EAYAS  148 (247)
T ss_dssp             EECCCCCC---CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCEEEEECCG----GGTSCCTTC---HHHHH
T ss_pred             EECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCcEEEEeec----ccccCCCCC---HHHHH
Confidence            99987654   3678899999999999999999999999999999765 5999999954    334444444   67999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------H---h--HHhhhhhhhhhhccCCCCCeeecee
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------E---A--IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      ||+|+.+|||+||.|+++ |||||+|+| |.++|+             |   +  |+|++.+++||  +|+  +|+|||+
T Consensus       149 sKaal~~ltk~lA~ela~-~IrVN~I~P-G~i~t~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL--~s~--~~iTG~~  222 (247)
T 3ged_A          149 AKGGIVALTHALAMSLGP-DVLVNCIAP-GWINVTEQQEFTQEDCAAIPAGKVGTPKDISNMVLFL--CQQ--DFITGET  222 (247)
T ss_dssp             HHHHHHHHHHHHHHHHTT-TSEEEEEEE-CSBCCCC---CCHHHHHTSTTSSCBCHHHHHHHHHHH--HHC--SSCCSCE
T ss_pred             HHHHHHHHHHHHHHHHCC-CCEEEEEec-CcCCCCCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--HhC--CCCCCCe
Confidence            999999999999999998 999999999 888876             2   2  99999999999  763  6999999


Q ss_pred             EEecCCcC
Q 025252          248 LLVNGGFR  255 (255)
Q Consensus       248 i~~dgG~~  255 (255)
                      |.||||++
T Consensus       223 i~VDGG~s  230 (247)
T 3ged_A          223 IIVDGGMS  230 (247)
T ss_dssp             EEESTTGG
T ss_pred             EEECcCHH
Confidence            99999984

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=2.9e-50  Score=334.38  Aligned_cols=216  Identities=19%  Similarity=0.278  Sum_probs=188.3

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++|+||+++||||++|||++++++|+++|++|++++|+++..        ..+..++++|++++++++++++++.+++|
T Consensus         6 l~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   77 (261)
T 4h15_A            6 FLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--------LPEELFVEADLTTKEGCAIVAEATRQRLG   77 (261)
T ss_dssp             CCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--------SCTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred             ccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--------CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3579999999999999999999999999999999999986531        12445789999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|+||||||..... ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..    ...+.+.  ..
T Consensus        78 ~iDilVnnAG~~~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~----~~~~~~~--~~  150 (261)
T 4h15_A           78 GVDVIVHMLGGSSAA-GGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQ----RVLPLPE--ST  150 (261)
T ss_dssp             SCSEEEECCCCCCCC-SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSCCTT--TC
T ss_pred             CCCEEEECCCCCccC-CCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehh----hccCCCC--cc
Confidence            999999998764322 2567889999999999999999999999999999998999999999543    3322221  12


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------H---h--HH
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------E---A--IA  224 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~---~--~~  224 (255)
                      .+|++||+|+.+|+++||.|++++|||||+|+| |.++|+                               |   +  ||
T Consensus       151 ~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pe  229 (261)
T 4h15_A          151 TAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSP-GWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPE  229 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeC-CCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHH
Confidence            669999999999999999999999999999999 887775                               1   2  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      |++.+++||  +|++++|+|||+|.||||+
T Consensus       230 evA~~v~fL--aS~~a~~itG~~i~VDGG~  257 (261)
T 4h15_A          230 EVANLIAFL--ASDRAASITGAEYTIDGGT  257 (261)
T ss_dssp             HHHHHHHHH--HSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHH--hCchhcCccCcEEEECCcC
Confidence            999999999  9999999999999999997

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.2e-50  Score=331.11  Aligned_cols=207  Identities=27%  Similarity=0.364  Sum_probs=181.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++||+++||||++|||++++++|+++|++|++++|+++.+++    ....++..+++|++|+++++++++    ++|++|
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~----~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~iD   80 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA----PRHPRIRREELDITDSQRLQRLFE----ALPRLD   80 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS----CCCTTEEEEECCTTCHHHHHHHHH----HCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh----hhcCCeEEEEecCCCHHHHHHHHH----hcCCCC
Confidence            489999999999999999999999999999999999876543    223578999999999999877765    579999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||...     ++.+.+.++|++++++|+.++++++|+++|+|++ ++|+|||+||.    .+..+.++.   ..|
T Consensus        81 iLVNNAGi~~-----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~-~~G~IVnisS~----~~~~~~~~~---~~Y  147 (242)
T 4b79_A           81 VLVNNAGISR-----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQ-RGGSILNIASM----YSTFGSADR---PAY  147 (242)
T ss_dssp             EEEECCCCCC-----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHH-HCEEEEEECCG----GGTSCCSSC---HHH
T ss_pred             EEEECCCCCC-----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH-cCCeEEEEeec----cccCCCCCC---HHH
Confidence            9999998643     4567899999999999999999999999999965 46999999944    444444444   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhccCCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAKDDD  239 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~~~~  239 (255)
                      ++||+|+.+|||+||.|++++|||||+|+| |.++|+                   |   +  |||++.+++||  +|++
T Consensus       148 ~asKaav~~ltr~lA~Ela~~gIrVNaV~P-G~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fL--aSd~  224 (242)
T 4b79_A          148 SASKGAIVQLTRSLACEYAAERIRVNAIAP-GWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFL--CGPG  224 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--TSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-CCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCch
Confidence            999999999999999999999999999999 888876                   2   2  99999999999  9999


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                      ++|+|||+|.|||||
T Consensus       225 a~~iTG~~l~VDGG~  239 (242)
T 4b79_A          225 ASFVTGAVLAVDGGY  239 (242)
T ss_dssp             GTTCCSCEEEESTTG
T ss_pred             hcCccCceEEECccH
Confidence            999999999999998

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=9.7e-49  Score=325.32  Aligned_cols=222  Identities=24%  Similarity=0.265  Sum_probs=193.7

Q ss_pred             eeecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ++|+||+++||||++  |||+++|++|+++|++|++++|+++.++++.+.+   ...++.++++|++++++++++++++.
T Consensus         2 ~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (256)
T 4fs3_A            2 LNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG   81 (256)
T ss_dssp             CCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            578999999999865  9999999999999999999999988777766554   33578999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +++|++|+||||||..... ...++.+.+.++|+..+++|+.+++.+++.+.|+++  ++|+||++||.    .+..+.+
T Consensus        82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~--~~G~IVnisS~----~~~~~~~  155 (256)
T 4fs3_A           82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMP--EGGSIVATTYL----GGEFAVQ  155 (256)
T ss_dssp             HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCT--TCEEEEEEECG----GGTSCCT
T ss_pred             HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCEEEEEecc----ccccCcc
Confidence            9999999999998765432 234567789999999999999999999999998874  46999999944    4444444


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~  231 (255)
                      +.   ..|++||+|+.+|+++||.|++++|||||+|+| |.++|+                   |   +  |||++.+++
T Consensus       156 ~~---~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~  231 (256)
T 4fs3_A          156 NY---NVMGVAKASLEANVKYLALDLGPDNIRVNAISA-GPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAA  231 (256)
T ss_dssp             TT---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             cc---hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEec-CCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            44   779999999999999999999999999999999 888775                   1   2  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +||+++|+|||+|.|||||+
T Consensus       232 fL--~Sd~a~~iTG~~i~VDGG~~  253 (256)
T 4fs3_A          232 YL--LSDLSSGVTGENIHVDSGFH  253 (256)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCchhcCccCCEEEECcCHH
Confidence            99  99999999999999999985

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=7.3e-46  Score=306.67  Aligned_cols=220  Identities=26%  Similarity=0.418  Sum_probs=196.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .+..++++|++|+++++++++++.+++|+
T Consensus         5 ~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   83 (248)
T 3op4_A            5 MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-DNGKGMALNVTNPESIEAVLKAITDEFGG   83 (248)
T ss_dssp             TCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999988888777765 46788999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||    .....+.++.   .
T Consensus        84 iD~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS----~~~~~~~~~~---~  153 (248)
T 3op4_A           84 VDILVNNAGITRD---NLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGS----VVGTMGNAGQ---A  153 (248)
T ss_dssp             CSEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----HHHHHCCTTC---H
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc----hhhcCCCCCC---h
Confidence            9999999886542   4667889999999999999999999999999998888899999994    3333333333   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||+|++++++.++.|++++|||||+|+| |.++|+                    ++  |+|+++++.||  ++++
T Consensus       154 ~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L--~s~~  230 (248)
T 3op4_A          154 NYAAAKAGVIGFTKSMAREVASRGVTVNTVAP-GFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVAFL--ASPE  230 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--HSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhCeEEEEEee-CCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCCc
Confidence            79999999999999999999999999999999 887775                    12  99999999999  8999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.++||++|.+|||+.
T Consensus       231 ~~~itG~~i~vdgG~~  246 (248)
T 3op4_A          231 AAYITGETLHVNGGMY  246 (248)
T ss_dssp             GTTCCSCEEEESTTSS
T ss_pred             cCCccCcEEEECCCee
Confidence            9999999999999984

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=4.2e-45  Score=304.92  Aligned_cols=221  Identities=21%  Similarity=0.253  Sum_probs=195.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    ..++.++.+|++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999887777665542    23589999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..    ...+.++.
T Consensus        84 ~~g~id~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~  156 (265)
T 3lf2_A           84 TLGCASILVNNAGQGR---VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLL----ASQPEPHM  156 (265)
T ss_dssp             HHCSCSEEEECCCCCC---CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGG----GTSCCTTB
T ss_pred             HcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcc----cCCCCCCc
Confidence            9999999999988654   3567788999999999999999999999999999888889999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------H---h--H
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------E---A--I  223 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~---~--~  223 (255)
                         ..|++||+++++|++.++.|++++|||||+|+| |.++|+                             +   +  |
T Consensus       157 ---~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p  232 (265)
T 3lf2_A          157 ---VATSAARAGVKNLVRSMAFEFAPKGVRVNGILI-GLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKP  232 (265)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCH
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-CcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCH
Confidence               679999999999999999999999999999999 777664                             1   1  8


Q ss_pred             HhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          224 ASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       224 ~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|++.+++||  +++.+.++||++|.+|||++
T Consensus       233 edvA~~v~fL--~s~~~~~itG~~i~vdGG~~  262 (265)
T 3lf2_A          233 IEAARAILFL--ASPLSAYTTGSHIDVSGGLS  262 (265)
T ss_dssp             HHHHHHHHHH--HSGGGTTCCSEEEEESSSCC
T ss_pred             HHHHHHHHHH--hCchhcCcCCCEEEECCCCc
Confidence            9999999999  99999999999999999985

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=3.6e-45  Score=304.86  Aligned_cols=222  Identities=23%  Similarity=0.363  Sum_probs=196.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++..   .++.++++|++|+++++++++++.++
T Consensus         6 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   85 (262)
T 3pk0_A            6 FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE   85 (262)
T ss_dssp             TCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999998887777766532   47899999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..   .+.++  
T Consensus        86 ~g~id~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~---~~~~~--  157 (262)
T 3pk0_A           86 FGGIDVVCANAGVFP---DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPI---TGYPG--  157 (262)
T ss_dssp             HSCCSEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTT---BCCTT--
T ss_pred             hCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcc---CCCCC--
Confidence            999999999988654   2567788999999999999999999999999999888889999999654321   12222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~  236 (255)
                       ...|++||++++++++.++.|++++|||||+|+| +.++|+                    ++  |+|++.++.||  +
T Consensus       158 -~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L--~  233 (262)
T 3pk0_A          158 -WSHYGATKAAQLGFMRTAAIELAPHKITVNAIMP-GNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFL--A  233 (262)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH--H
T ss_pred             -ChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEe-CcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence             2679999999999999999999999999999999 877775                    11  89999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||++|.+|||+.
T Consensus       234 s~~~~~itG~~i~vdGG~~  252 (262)
T 3pk0_A          234 TKEAGYITGQAIAVDGGQV  252 (262)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCcCCEEEECCCee
Confidence            9999999999999999974

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=4.2e-45  Score=303.48  Aligned_cols=220  Identities=30%  Similarity=0.437  Sum_probs=194.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   87 (256)
T 3gaf_A            8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF   87 (256)
T ss_dssp             TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            56899999999999999999999999999999999999887777766553  2578899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|++|||||....   .++ +.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.  
T Consensus        88 g~id~lv~nAg~~~~---~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~--  157 (256)
T 3gaf_A           88 GKITVLVNNAGGGGP---KPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMA----GENTNVRM--  157 (256)
T ss_dssp             SCCCEEEECCCCCCC---CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG----GTCCCTTC--
T ss_pred             CCCCEEEECCCCCCC---CCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHH----HcCCCCCc--
Confidence            999999999886642   344 78999999999999999999999999999888889999999543    33333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~  236 (255)
                       ..|++||++++++++.++.|++++|||||+|+| +.++|+                     ++  |+|++.+++||  +
T Consensus       158 -~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~L--~  233 (256)
T 3gaf_A          158 -ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP-GAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFL--C  233 (256)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--H
T ss_pred             -hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEE-ccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--c
Confidence             779999999999999999999999999999999 877775                     11  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||++|.+|||+.
T Consensus       234 s~~~~~itG~~i~vdgG~~  252 (256)
T 3gaf_A          234 SPAAAWISGQVLTVSGGGV  252 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CCcccCccCCEEEECCCcc
Confidence            9999999999999999974

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.3e-45  Score=303.49  Aligned_cols=219  Identities=27%  Similarity=0.416  Sum_probs=195.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++. .++.++.+|++|+++++++++++.+.+|++
T Consensus         3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (247)
T 3rwb_A            3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIG-KKARAIAADISDPGSVKALFAEIQALTGGI   81 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence            4789999999999999999999999999999999999988888887774 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.    ....+.++.   .
T Consensus        82 d~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~----~~~~~~~~~---~  151 (247)
T 3rwb_A           82 DILVNNASIVP---FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASN----TFFAGTPNM---A  151 (247)
T ss_dssp             SEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCT----HHHHTCTTC---H
T ss_pred             CEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECch----hhccCCCCc---h
Confidence            99999988664   35667889999999999999999999999999998766 6999999954    333333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .|++||+|++++++.++.|++++|||||+|+| |.++|+                     ++  |+|+++++.||  +++
T Consensus       152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~v~~L--~s~  228 (247)
T 3rwb_A          152 AYVAAKGGVIGFTRALATELGKYNITANAVTP-GLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIADVVSFL--ASD  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHHHHHHH--HSG
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcCcCccccccChhHHHHHHhcccccCCCcCHHHHHHHHHHH--hCc
Confidence            79999999999999999999999999999999 777765                     11  89999999999  999


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||++|.+|||+.
T Consensus       229 ~~~~itG~~i~vdGG~~  245 (247)
T 3rwb_A          229 DARWITGQTLNVDAGMV  245 (247)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             cccCCCCCEEEECCCcc
Confidence            99999999999999974

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-44  Score=303.91  Aligned_cols=223  Identities=32%  Similarity=0.452  Sum_probs=197.1

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .++.++++|++|+++++++++++.+.
T Consensus        20 ~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           20 FQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-SKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHH
Confidence            34467899999999999999999999999999999999999988888877764 57889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++. 
T Consensus        99 ~g~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~-  170 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGT---TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT----ATSAIADR-  170 (277)
T ss_dssp             HSCCCEEEECCCCCC---CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGG----GTSCCTTB-
T ss_pred             cCCCCEEEECCCcCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchh----hCcCCCCC-
Confidence            999999999988654   3567788999999999999999999999999999888889999999543    33333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH--------------------------h--HHhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE--------------------------A--IASIANAA  230 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~--------------------------~--~~~~~~~~  230 (255)
                        ..|++||+|+++|++.++.|++++|||||+|+| |.++|+.                          +  |+|++.++
T Consensus       171 --~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v  247 (277)
T 4dqx_A          171 --TAYVASKGAISSLTRAMAMDHAKEGIRVNAVAP-GTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAM  247 (277)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHH
T ss_pred             --hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHH
Confidence              679999999999999999999999999999999 7776651                          1  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +||  +++.+.++||++|.+|||++
T Consensus       248 ~~L--~s~~~~~itG~~i~vdGG~~  270 (277)
T 4dqx_A          248 LFL--ASDRSRFATGSILTVDGGSS  270 (277)
T ss_dssp             HHH--HSGGGTTCCSCEEEESSSSS
T ss_pred             HHH--hCCccCCCcCCEEEECCchh
Confidence            999  89999999999999999974

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=3.1e-45  Score=305.89  Aligned_cols=220  Identities=28%  Similarity=0.440  Sum_probs=191.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++. .++.++.+|++|+++++++++++.+.+|+
T Consensus        23 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (266)
T 3grp_A           23 FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLG-KDVFVFSANLSDRKSIKQLAEVAEREMEG  101 (266)
T ss_dssp             TCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHHHHHHHTS
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            56899999999999999999999999999999999999988888877765 57899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+    ..+.++.   .
T Consensus       102 iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~----~~~~~~~---~  171 (266)
T 3grp_A          102 IDILVNNAGITRD---GLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVG----VVGNPGQ---T  171 (266)
T ss_dssp             CCEEEECCCCC--------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-----------CH---H
T ss_pred             CCEEEECCCCCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHH----cCCCCCc---h
Confidence            9999999886542   4567789999999999999999999999999998888899999995543    2233222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||+|++++++.++.|++++|||||+|+| +.++|+                    ++  |+|++.+++||  +++.
T Consensus       172 ~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L--~s~~  248 (266)
T 3grp_A          172 NYCAAKAGLIGFSKALAQEIASRNITVNCIAP-GFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFATVYL--ASDE  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHHHHH--HSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEee-CcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCcc
Confidence            79999999999999999999999999999999 877775                    11  89999999999  9999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.++||++|.+|||+.
T Consensus       249 ~~~itG~~i~vdGG~~  264 (266)
T 3grp_A          249 AAYLTGQTLHINGGMA  264 (266)
T ss_dssp             GTTCCSCEEEESTTC-
T ss_pred             ccCccCCEEEECCCee
Confidence            9999999999999984

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-44  Score=305.10  Aligned_cols=223  Identities=26%  Similarity=0.319  Sum_probs=194.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++..  .++.++++|++|+++++++++++.+.+
T Consensus        24 ~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (283)
T 3v8b_A           24 MNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKF  103 (283)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            568899999999999999999999999999999999999888888877753  478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+....  +.+   +
T Consensus       104 g~iD~lVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~--~~~---~  176 (283)
T 3v8b_A          104 GHLDIVVANAGINGV--WAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF--TTP---G  176 (283)
T ss_dssp             SCCCEEEECCCCCCC--BCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC--CST---T
T ss_pred             CCCCEEEECCCCCCC--CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC--CCC---C
Confidence            999999999886542  256778899999999999999999999999999988888999999965432210  222   2


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--HHhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--IASIAN  228 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~~~~~~  228 (255)
                      ...|++||+|++++++.++.|++++|||||+|+| |.++|+                             ++  |+|+++
T Consensus       177 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~  255 (283)
T 3v8b_A          177 ATAYTATKAAQVAIVQQLALELGKHHIRVNAVCP-GAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAE  255 (283)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE-CSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEe-CCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHH
Confidence            3679999999999999999999999999999999 776654                             11  799999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCc
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++||  +++.+.++||++|.+|||+
T Consensus       256 ~v~fL--~s~~a~~itG~~i~vdGG~  279 (283)
T 3v8b_A          256 LIRFL--VSERARHVTGSPVWIDGGQ  279 (283)
T ss_dssp             HHHHH--TSGGGTTCCSCEEEESTTH
T ss_pred             HHHHH--cCccccCCcCCEEEECcCc
Confidence            99999  9999999999999999997

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.6e-45  Score=304.82  Aligned_cols=222  Identities=27%  Similarity=0.370  Sum_probs=194.8

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.   ..++.++++|++|+++++++++++.+
T Consensus        15 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   94 (266)
T 4egf_A           15 VLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAE   94 (266)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999887777665542   35789999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|++|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..    ...+.++
T Consensus        95 ~~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~  167 (266)
T 4egf_A           95 AFGGLDVLVNNAGISHP---QPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAA----ALAPLPD  167 (266)
T ss_dssp             HHTSCSEEEEECCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG----GTSCCTT
T ss_pred             HcCCCCEEEECCCcCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchh----hccCCCC
Confidence            99999999999886542   5667889999999999999999999999999997765 68999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++|++.++.|++++|||||+|+| +.++|+                      ++  |+|++++++|
T Consensus       168 ~---~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~  243 (266)
T 4egf_A          168 H---YAYCTSKAGLVMATKVLARELGPHGIRANSVCP-TVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVW  243 (266)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHH
T ss_pred             C---hHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEe-CCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 777765                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       244 L--~s~~~~~itG~~i~vdGG~~  264 (266)
T 4egf_A          244 L--ASDAASMINGVDIPVDGGYT  264 (266)
T ss_dssp             H--HSGGGTTCCSCEEEESTTGG
T ss_pred             H--hCchhcCccCcEEEECCCcc
Confidence            9  99999999999999999984

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.3e-44  Score=303.83  Aligned_cols=220  Identities=32%  Similarity=0.486  Sum_probs=195.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..++++ .++.++++|++|+++++++++++.+.+|+
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIG-CGAAACRVDVSDEQQIIAMVDACVAAFGG  103 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-SSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999988888887774 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    +..+.++.   .
T Consensus       104 iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~----~~~~~~~~---~  173 (277)
T 3gvc_A          104 VDKLVANAGVVH---LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA----GQVAVGGT---G  173 (277)
T ss_dssp             CCEEEECCCCCC---CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG----GTSCCTTB---H
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchh----hccCCCCc---h
Confidence            999999988654   3567788999999999999999999999999999888899999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAALY  232 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~~~  232 (255)
                      .|++||++++++++.++.|++++|||||+|+| +.++|+                           ++  |+|++.+++|
T Consensus       174 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  252 (277)
T 3gvc_A          174 AYGMSKAGIIQLSRITAAELRSSGIRSNTLLP-AFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVF  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHH
Confidence            79999999999999999999999999999999 776654                           11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++|||+|.+|||+.
T Consensus       253 L--~s~~a~~itG~~i~vdGG~~  273 (277)
T 3gvc_A          253 L--LSDDASMITGTTQIADGGTI  273 (277)
T ss_dssp             H--HSGGGTTCCSCEEEESTTGG
T ss_pred             H--cCCccCCccCcEEEECCcch
Confidence            9  99999999999999999973

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=1.8e-44  Score=305.18  Aligned_cols=222  Identities=24%  Similarity=0.366  Sum_probs=197.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++..   .++.++.+|++|+++++++++++.+.
T Consensus        37 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  116 (293)
T 3rih_A           37 FDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDA  116 (293)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999999999988888877753   47889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..   .+.++  
T Consensus       117 ~g~iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~---~~~~~--  188 (293)
T 3rih_A          117 FGALDVVCANAGIFP---EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPV---TGYPG--  188 (293)
T ss_dssp             HSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTT---BBCTT--
T ss_pred             cCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhcc---CCCCC--
Confidence            999999999988654   2567788999999999999999999999999999888889999999654321   12222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~  236 (255)
                       ...|++||+++++|++.++.|++++|||||+|+| +.++|+                    ++  |+|++.++.||  +
T Consensus       189 -~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL--~  264 (293)
T 3rih_A          189 -WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILP-GNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLAAFL--A  264 (293)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH--H
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEec-CCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--h
Confidence             2679999999999999999999999999999999 877775                    11  89999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||++|.+|||+.
T Consensus       265 s~~a~~itG~~i~vdGG~~  283 (293)
T 3rih_A          265 TDEAGYITGQAIVVDGGQV  283 (293)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEECCCcc
Confidence            9999999999999999974

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=2.1e-44  Score=299.60  Aligned_cols=218  Identities=22%  Similarity=0.333  Sum_probs=192.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++|++|+++ +|+++..++..+++..  .++.++.+|++|+++++++++++.+.+|+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            68999999999999999999999999999997 8888777777666532  47889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.   .
T Consensus        83 id~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~---~  152 (258)
T 3oid_A           83 LDVFVNNAASGV---LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLG----SIRYLENY---T  152 (258)
T ss_dssp             CCEEEECCCCCC---CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGG----GTSBCTTC---H
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchh----hCCCCCCc---H
Confidence            999999987554   3567788999999999999999999999999999988889999999543    33333333   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      .|++||++++++++.++.|++++|||||+|+| +.++|+                      ++  |+|++.+++||  ++
T Consensus       153 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L--~s  229 (258)
T 3oid_A          153 TVGVSKAALEALTRYLAVELSPKQIIVNAVSG-GAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFL--VS  229 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHH--TS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCcEEEEEee-CCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hC
Confidence            79999999999999999999999999999999 777765                      11  89999999999  99


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.+.++||++|.+|||+.
T Consensus       230 ~~~~~itG~~i~vdGG~~  247 (258)
T 3oid_A          230 SKADMIRGQTIIVDGGRS  247 (258)
T ss_dssp             STTTTCCSCEEEESTTGG
T ss_pred             cccCCccCCEEEECCCcc
Confidence            999999999999999974

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.7e-45  Score=304.09  Aligned_cols=220  Identities=25%  Similarity=0.358  Sum_probs=194.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus        25 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  104 (270)
T 3ftp_A           25 TLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG  104 (270)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999887777665553  24688899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||.    ....+.++.   
T Consensus       105 ~iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~----~~~~~~~~~---  174 (270)
T 3ftp_A          105 ALNVLVNNAGITQ---DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSV----VGSAGNPGQ---  174 (270)
T ss_dssp             CCCEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH----HHHHCCTTB---
T ss_pred             CCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECch----hhCCCCCCc---
Confidence            9999999988654   256678899999999999999999999999999988888999999943    333333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|++||+|+++|++.++.|++++||+||+|+| +.++|+                    ++  |+|++++++||  +++
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L--~s~  251 (270)
T 3ftp_A          175 VNYAAAKAGVAGMTRALAREIGSRGITVNCVAP-GFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVAFL--ASP  251 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHH--HSG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEe-CCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--hCC
Confidence            679999999999999999999999999999999 877775                    11  89999999999  899


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||++|.+|||+.
T Consensus       252 ~~~~itG~~i~vdGG~~  268 (270)
T 3ftp_A          252 QAGYITGTTLHVNGGMF  268 (270)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             CcCCccCcEEEECCCcc
Confidence            99999999999999984

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-44  Score=301.10  Aligned_cols=221  Identities=24%  Similarity=0.365  Sum_probs=195.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++. .++.++.+|++|+++++++++++.+++|+
T Consensus         7 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   85 (271)
T 3tzq_B            7 AELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-RGAVHHVVDLTNEVSVRALIDFTIDTFGR   85 (271)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC-TTCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CCeEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999999998888887774 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||..... ...+.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.   .
T Consensus        86 id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~---~  157 (271)
T 3tzq_B           86 LDIVDNNAAHSDPA-DMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSAT----AHAAYDMS---T  157 (271)
T ss_dssp             CCEEEECCCCCCTT-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGG----GTSBCSSC---H
T ss_pred             CCEEEECCCCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHH----HcCCCCCC---h
Confidence            99999998865321 2456678999999999999999999999999999888889999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .|++||++++++++.++.|++++|||||+|+| +.++|+                     ++  |+|++.+++||  +++
T Consensus       158 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L--~s~  234 (271)
T 3tzq_B          158 AYACTKAAIETLTRYVATQYGRHGVRCNAIAP-GLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAELVCFL--ASD  234 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHHHHHHH--HSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEe-CCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCc
Confidence            79999999999999999999999999999999 777764                     11  89999999999  999


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      .+.++||++|.+|||+
T Consensus       235 ~~~~itG~~i~vdGG~  250 (271)
T 3tzq_B          235 RAAFITGQVIAADSGL  250 (271)
T ss_dssp             GGTTCCSCEEEESTTT
T ss_pred             ccCCcCCCEEEECCCc
Confidence            9999999999999995

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=1.4e-44  Score=303.40  Aligned_cols=224  Identities=28%  Similarity=0.455  Sum_probs=195.1

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++++|++|+++++++++++.++
T Consensus        27 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  106 (276)
T 3r1i_A           27 LFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGE  106 (276)
T ss_dssp             GGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999988887776653  247889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++ +++||++||..+..    ... .
T Consensus       107 ~g~iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~----~~~-~  178 (276)
T 3r1i_A          107 LGGIDIAVCNAGIVS---VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHI----INI-P  178 (276)
T ss_dssp             HSCCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS----CCC-S
T ss_pred             cCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcc----cCC-C
Confidence            999999999988654   24567789999999999999999999999999998766 48999999554321    111 1


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhcc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~  236 (255)
                      .+...|++||++++++++.++.|++++|||||+|+| +.++|+                   ++  |+|++.+++||  +
T Consensus       179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL--~  255 (276)
T 3r1i_A          179 QQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSP-GYIRTELVEPLADYHALWEPKIPLGRMGRPEELTGLYLYL--A  255 (276)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSTTTGGGGGGHHHHGGGSTTSSCBCGGGSHHHHHHH--H
T ss_pred             CCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEee-CCCcCCccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH--c
Confidence            123679999999999999999999999999999999 877775                   11  89999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||++|.+|||++
T Consensus       256 s~~~~~itG~~i~vdGG~~  274 (276)
T 3r1i_A          256 SAASSYMTGSDIVIDGGYT  274 (276)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCccCcEEEECcCcc
Confidence            9999999999999999985

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=2.7e-44  Score=298.76  Aligned_cols=220  Identities=25%  Similarity=0.395  Sum_probs=193.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +|++|+++||||++|||++++++|+++|++|++++|+++..++..+++..  .++.++.+|++|+++++++++++.+++|
T Consensus         3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   82 (257)
T 3imf_A            3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG   82 (257)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888888877753  4788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh-cCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM-VPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|+| ++++.|+||++||..    ...+.++.  
T Consensus        83 ~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~--  153 (257)
T 3imf_A           83 RIDILINNAAGNF---ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATY----AWDAGPGV--  153 (257)
T ss_dssp             CCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGG----GGSCCTTC--
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchh----hccCCCCc--
Confidence            9999999987553   2566788999999999999999999999999999 445579999999543    33333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhc-ccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYN  233 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l  233 (255)
                       ..|++||+++++|++.++.|++ ++|||||+|+| |.++|+                       ++  |+|++.+++||
T Consensus       154 -~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  231 (257)
T 3imf_A          154 -IHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAP-GPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYL  231 (257)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEE-CCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence             6799999999999999999997 78999999999 766543                       11  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||+++.+|||+.
T Consensus       232 --~s~~~~~itG~~i~vdGG~~  251 (257)
T 3imf_A          232 --CSDEAAYINGTCMTMDGGQH  251 (257)
T ss_dssp             --HSGGGTTCCSCEEEESTTTT
T ss_pred             --cCchhcCccCCEEEECCCcc
Confidence              89999999999999999974

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=7.8e-45  Score=304.22  Aligned_cols=221  Identities=24%  Similarity=0.377  Sum_probs=195.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus        22 ~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (271)
T 4ibo_A           22 FDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG  101 (271)
T ss_dssp             GCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            56899999999999999999999999999999999999888777776653  2478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.  
T Consensus       102 g~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~----~~~~~~~~--  172 (271)
T 4ibo_A          102 IDVDILVNNAGIQF---RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLT----SELARATV--  172 (271)
T ss_dssp             CCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSBCTTC--
T ss_pred             CCCCEEEECCCCCC---CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHH----hCCCCCCc--
Confidence            99999999988654   2566788999999999999999999999999999888889999999543    33333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||++++++++.++.|++++|||||+|+| |.++|+                      ++  |+|++.+++||  
T Consensus       173 -~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L--  248 (271)
T 4ibo_A          173 -APYTVAKGGIKMLTRAMAAEWAQYGIQANAIGP-GYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFL--  248 (271)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHH--
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEe-ccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             679999999999999999999999999999999 777765                      11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||++|.+|||+.
T Consensus       249 ~s~~~~~itG~~i~vdGG~~  268 (271)
T 4ibo_A          249 SASASDYVNGQIIYVDGGML  268 (271)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hCccccCCCCcEEEECCCee
Confidence            89999999999999999973

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=3.1e-44  Score=297.52  Aligned_cols=221  Identities=19%  Similarity=0.304  Sum_probs=192.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeC--CCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDV--SNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~--~~~~~~~~~~~~~~   96 (255)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++..   .++.++.+|+  +|.++++++++++.
T Consensus         8 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (252)
T 3f1l_A            8 DLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIA   87 (252)
T ss_dssp             TTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHH
Confidence            357999999999999999999999999999999999998887776665532   3688899999  99999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|+||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++
T Consensus        88 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~  161 (252)
T 3f1l_A           88 VNYPRLDGVLHNAGLLGD--VCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSV----GRQGRAN  161 (252)
T ss_dssp             HHCSCCSEEEECCCCCCC--CSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG----GTSCCTT
T ss_pred             HhCCCCCEEEECCccCCC--CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChh----hccCCCC
Confidence            999999999999886432  2567788999999999999999999999999999888889999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhhccCCCCCe
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------------A--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      .   ..|++||++++++++.++.|++++ ||||+|+| |.++|+.            +  |+|++..++||  +++.+.+
T Consensus       162 ~---~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~P-G~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~L--~s~~~~~  234 (252)
T 3f1l_A          162 W---GAYAASKFATEGMMQVLADEYQQR-LRVNCINP-GGTRTAMRASAFPTEDPQKLKTPADIMPLYLWL--MGDDSRR  234 (252)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEC-CSBSSHHHHHHCTTCCGGGSBCTGGGHHHHHHH--HSGGGTT
T ss_pred             C---chhHHHHHHHHHHHHHHHHHhcCC-cEEEEEec-CcccCchhhhhCCccchhccCCHHHHHHHHHHH--cCccccC
Confidence            3   679999999999999999999987 99999999 8887761            1  89999999999  9999999


Q ss_pred             eeceeEEecCCcC
Q 025252          243 VGKQNLLVNGGFR  255 (255)
Q Consensus       243 ~~G~~i~~dgG~~  255 (255)
                      +||++|.+|||++
T Consensus       235 itG~~i~vdgG~~  247 (252)
T 3f1l_A          235 KTGMTFDAQPGRK  247 (252)
T ss_dssp             CCSCEEESSCC--
T ss_pred             CCCCEEEeCCCcC
Confidence            9999999999974

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=2.7e-44  Score=302.41  Aligned_cols=223  Identities=27%  Similarity=0.335  Sum_probs=194.7

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++..     .++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   85 (281)
T 3svt_A            6 QLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAV   85 (281)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999998887777766532     26889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||.    ....+.+
T Consensus        86 ~~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~----~~~~~~~  159 (281)
T 3svt_A           86 TAWHGRLHGVVHCAGGSEN--IGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSI----AASNTHR  159 (281)
T ss_dssp             HHHHSCCCEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCH----HHHSCCT
T ss_pred             HHHcCCCCEEEECCCcCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCH----HHcCCCC
Confidence            9999999999999876332  246778899999999999999999999999999988888999999944    3333333


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~  231 (255)
                      ..   ..|++||++++++++.++.|++++|||||+|+| +.++|+                      ++  |+|++.+++
T Consensus       160 ~~---~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~  235 (281)
T 3svt_A          160 WF---GAYGVTKSAVDHLMQLAADELGASWVRVNSIRP-GLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAM  235 (281)
T ss_dssp             TC---THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHH
T ss_pred             CC---hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-CcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            33   679999999999999999999999999999999 777775                      11  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +++.+.++||+++.+|||+.
T Consensus       236 ~l--~s~~~~~itG~~~~vdgG~~  257 (281)
T 3svt_A          236 FL--LSDAASFVTGQVINVDGGQM  257 (281)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCcccCCCCCCEEEeCCChh
Confidence            99  89999999999999999973

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3.3e-44  Score=302.58  Aligned_cols=222  Identities=25%  Similarity=0.362  Sum_probs=190.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----------------cchHHHHHHHhC--CCceEEEEeeCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ----------------DNLGQALADKLG--HQDVCYIHCDVS   83 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~----------------~~~~~~~~~~~~--~~~~~~~~~D~~   83 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+                .+.+++..+++.  ..++.++++|++
T Consensus         7 ~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   86 (286)
T 3uve_A            7 GRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVR   86 (286)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCC
Confidence            35789999999999999999999999999999999887                444555554443  257889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEec
Q 025252           84 NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTT  162 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is  162 (255)
                      |+++++++++++.+.+|++|+||||||.....  .++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++|
T Consensus        87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~is  164 (286)
T 3uve_A           87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGG--DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTS  164 (286)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             CHHHHHHHHHHHHHHhCCCCEEEECCcccCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEEC
Confidence            99999999999999999999999998865422  2467789999999999999999999999999997765 68999999


Q ss_pred             cCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------
Q 025252          163 GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------  220 (255)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------  220 (255)
                      |..    ...+.++.   ..|++||+++++|++.++.|++++|||||+|+| |.++|+                      
T Consensus       165 S~~----~~~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~  236 (286)
T 3uve_A          165 SVG----GLKAYPHT---GHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHP-THVKTPMLHNEGTFKMFRPDLENPGPDD  236 (286)
T ss_dssp             CGG----GTSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBSSTTTSSHHHHHHHCTTSSSCCHHH
T ss_pred             chh----hccCCCCc---cHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CcccCCcccccchhhhccccccccchhh
Confidence            543    33333333   679999999999999999999999999999999 776654                      


Q ss_pred             -------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                   ++  |+|++.+++||  +++.+.++|||+|.||||++
T Consensus       237 ~~~~~~~~~~~p~r~~~p~dvA~~v~fL--~s~~a~~itG~~i~vdGG~~  284 (286)
T 3uve_A          237 MAPICQMFHTLPIPWVEPIDISNAVLFF--ASDEARYITGVTLPIDAGSC  284 (286)
T ss_dssp             HHHHHHTTCSSSCSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHhhhccCCCcCCHHHHHHHHHHH--cCccccCCcCCEEeECCccc
Confidence                         11  78999999999  99999999999999999974

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-44  Score=302.58  Aligned_cols=222  Identities=33%  Similarity=0.454  Sum_probs=195.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.++++.+++..  .++.++.+|++|+++++++++++.+++|
T Consensus         5 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   84 (280)
T 3tox_A            5 RLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG   84 (280)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888888877753  5788899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|+||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..   .+.++   .
T Consensus        85 ~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~---~~~~~---~  156 (280)
T 3tox_A           85 GLDTAFNNAGALGA--MGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHT---AGFAG---V  156 (280)
T ss_dssp             CCCEEEECCCCCCS--CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTT---BCCTT---C
T ss_pred             CCCEEEECCCCCCC--CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCc---CCCCC---c
Confidence            99999999886532  2567788999999999999999999999999999988889999999654321   12222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNM  234 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~  234 (255)
                      ..|++||+|++++++.++.|++++|||||+|+| |.++|+                        ++  |+|++.+++|| 
T Consensus       157 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L-  234 (280)
T 3tox_A          157 APYAASKAGLIGLVQALAVELGARGIRVNALLP-GGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYL-  234 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHH-
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEE-CCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHH-
Confidence            679999999999999999999999999999999 777664                        11  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||++|.+|||+.
T Consensus       235 -~s~~a~~itG~~i~vdGG~~  254 (280)
T 3tox_A          235 -ASDGASFVTGAALLADGGAS  254 (280)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hCccccCCcCcEEEECCCcc
Confidence             89999999999999999973

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=2.1e-44  Score=302.59  Aligned_cols=220  Identities=26%  Similarity=0.341  Sum_probs=193.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+...+..+++.   ..++.++.+|++|+++++++++++.++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34789999999999999999999999999999999999887766665542   357899999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++.|+||++||.    ....+.+.. 
T Consensus       103 ~g~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~----~~~~~~~~~-  174 (277)
T 4fc7_A          103 FGRIDILINCAAGNF---LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITAT----LGNRGQALQ-  174 (277)
T ss_dssp             HSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCS----HHHHTCTTC-
T ss_pred             cCCCCEEEECCcCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECch----hhCCCCCCc-
Confidence            999999999987543   256677899999999999999999999999999987778999999954    333333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYN  233 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l  233 (255)
                        ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                       ++  |+|++.+++||
T Consensus       175 --~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL  251 (277)
T 4fc7_A          175 --VHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAP-GPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYL  251 (277)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEE-CCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence              679999999999999999999999999999999 777653                       11  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++.+.++||++|.+|||+
T Consensus       252 --~s~~~~~itG~~i~vdGG~  270 (277)
T 4fc7_A          252 --ASPLASYVTGAVLVADGGA  270 (277)
T ss_dssp             --HSGGGTTCCSCEEEESTTH
T ss_pred             --cCCccCCcCCCEEEECCCc
Confidence              8999999999999999996

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=4.8e-44  Score=300.66  Aligned_cols=221  Identities=28%  Similarity=0.311  Sum_probs=190.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .-+++|+++||||++|||++++++|+++|++|++++|+++..++..+++..  .++.++.+|++|+++++++++++.+.+
T Consensus        20 ~m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   99 (279)
T 3sju_A           20 HMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERF   99 (279)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            346899999999999999999999999999999999998887777766642  478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHH--HhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR--VMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      |++|+||||||....   .++.+.+.++|++++++|+.++++++++++|  .|++++.|+||++||..    ...+.++.
T Consensus       100 g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~----~~~~~~~~  172 (279)
T 3sju_A          100 GPIGILVNSAGRNGG---GETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTG----GKQGVMYA  172 (279)
T ss_dssp             CSCCEEEECCCCCCC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGG----GTSCCTTC
T ss_pred             CCCcEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChh----hccCCCCC
Confidence            999999999886542   5667789999999999999999999999999  57777789999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HH
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IA  224 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~  224 (255)
                         ..|++||+|++++++.++.|++++|||||+|+| |.++|+                               ++  |+
T Consensus       173 ---~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  248 (279)
T 3sju_A          173 ---APYTASKHGVVGFTKSVGFELAKTGITVNAVCP-GYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPE  248 (279)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-SSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHH
T ss_pred             ---hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEee-CcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHH
Confidence               679999999999999999999999999999999 766553                               11  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |++.+++||  +++.+.++||++|.+|||+.
T Consensus       249 dvA~~v~~L--~s~~a~~itG~~i~vdGG~~  277 (279)
T 3sju_A          249 EVAGLVGYL--VTDAAASITAQALNVCGGLG  277 (279)
T ss_dssp             HHHHHHHHH--TSSGGGGCCSCEEEESTTCC
T ss_pred             HHHHHHHHH--hCccccCcCCcEEEECCCcc
Confidence            999999999  99999999999999999984

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=6e-44  Score=302.88  Aligned_cols=222  Identities=27%  Similarity=0.379  Sum_probs=189.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------cchHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ------------DNLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++.  ..++.++++|++|+++
T Consensus        24 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~  103 (299)
T 3t7c_A           24 GKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA  103 (299)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            34789999999999999999999999999999999987            344444444432  3578999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~  166 (255)
                      ++++++++.+.+|++|+||||||.....  .++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.. 
T Consensus       104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~-  180 (299)
T 3t7c_A          104 MQAAVDDGVTQLGRLDIVLANAALASEG--TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG-  180 (299)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCC--CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG-
T ss_pred             HHHHHHHHHHHhCCCCEEEECCCCCCCC--CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh-
Confidence            9999999999999999999998865432  2467889999999999999999999999999987654 78999999543 


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------  221 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------  221 (255)
                         ...+.++.   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+.                         
T Consensus       181 ---~~~~~~~~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (299)
T 3t7c_A          181 ---GLRGAENI---GNYIASKHGLHGLMRTMALELGPRNIRVNIVCP-SSVATPMLLNEPTYRMFRPDLENPTVEDFQVA  253 (299)
T ss_dssp             ---GTSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ---hccCCCCc---chHHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CCccCccccccchhhhhhhhhccchhhHHHHH
Confidence               33333333   679999999999999999999999999999999 7776641                         


Q ss_pred             ----------h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 ----------A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 ----------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                +  |+|++.+++||  +++.+.++||++|.||||+.
T Consensus       254 ~~~~~~~p~r~~~pedvA~~v~fL--~s~~a~~itG~~i~vdGG~~  297 (299)
T 3t7c_A          254 SRQMHVLPIPYVEPADISNAILFL--VSDDARYITGVSLPVDGGAL  297 (299)
T ss_dssp             HHHHSSSSCSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             hhhhcccCcCCCCHHHHHHHHHHH--hCcccccCcCCEEeeCCCcc
Confidence                      2  89999999999  99999999999999999974

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=4e-44  Score=298.83  Aligned_cols=220  Identities=21%  Similarity=0.315  Sum_probs=192.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++++|++|+++++++++++.+++|
T Consensus         8 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   87 (264)
T 3ucx_A            8 LLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG   87 (264)
T ss_dssp             TTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999888777776653  35788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++ |+||++||.    ....+.++.   
T Consensus        88 ~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~----~~~~~~~~~---  157 (264)
T 3ucx_A           88 RVDVVINNAFRVPS--MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSM----VVRHSQAKY---  157 (264)
T ss_dssp             CCSEEEECCCSCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCG----GGGCCCTTC---
T ss_pred             CCcEEEECCCCCCC--CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcc----hhccCCCcc---
Confidence            99999999876432  25677889999999999999999999999999997654 999999954    333333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~  227 (255)
                      ..|++||++++++++.++.|++++|||||+|+| +.++|+                               ++  |+|++
T Consensus       158 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA  236 (264)
T 3ucx_A          158 GAYKMAKSALLAMSQTLATELGEKGIRVNSVLP-GYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVA  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-SSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCccCeEEEEEec-CccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHH
Confidence            679999999999999999999999999999999 776553                               12  89999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .+++||  +++.+.++||++|.+|||+.
T Consensus       237 ~~v~~L--~s~~~~~itG~~i~vdGG~~  262 (264)
T 3ucx_A          237 SAILFM--ASDLASGITGQALDVNCGEY  262 (264)
T ss_dssp             HHHHHH--HSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHHH--cCccccCCCCCEEEECCCcc
Confidence            999999  99999999999999999974

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=2.7e-44  Score=300.66  Aligned_cols=223  Identities=27%  Similarity=0.438  Sum_probs=191.9

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +.+++++|+++||||++|||++++++|+++|++|++++| +.+..+++.+++.  ..++.++.+|++|+++++++++++.
T Consensus        22 ~~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~  101 (269)
T 4dmm_A           22 TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVI  101 (269)
T ss_dssp             --CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            345688999999999999999999999999999999988 4455555554442  2578899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.    ....+.++
T Consensus       102 ~~~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~----~~~~~~~~  174 (269)
T 4dmm_A          102 ERWGRLDVLVNNAGITRD---TLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASV----VGEMGNPG  174 (269)
T ss_dssp             HHHSCCCEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCH----HHHHCCTT
T ss_pred             HHcCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECch----hhcCCCCC
Confidence            999999999999886542   45677899999999999999999999999999988888999999943    33333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh--HHhhhhhhhhhhccC
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~--~~~~~~~~~~l~~~~  237 (255)
                      .   ..|++||+|++++++.++.|++++|||||+|+| |.++|+                 ++  |+|++.++.||  ++
T Consensus       175 ~---~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l--~s  248 (269)
T 4dmm_A          175 Q---ANYSAAKAGVIGLTKTVAKELASRGITVNAVAP-GFIATDMTSELAAEKLLEVIPLGRYGEAAEVAGVVRFL--AA  248 (269)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBTTSCSCHHHHHHHGGGCTTSSCBCHHHHHHHHHHH--HH
T ss_pred             c---hhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEE-CCCcCcccccccHHHHHhcCCCCCCCCHHHHHHHHHHH--hC
Confidence            3   679999999999999999999999999999999 888775                 11  89999999999  88


Q ss_pred             C-CCCeeeceeEEecCCcC
Q 025252          238 D-DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~-~~~~~~G~~i~~dgG~~  255 (255)
                      + .+.++||++|.+|||+.
T Consensus       249 ~~~~~~itG~~i~vdGG~~  267 (269)
T 4dmm_A          249 DPAAAYITGQVINIDGGLV  267 (269)
T ss_dssp             CGGGGGCCSCEEEESTTSC
T ss_pred             CcccCCCcCCEEEECCCee
Confidence            7 78899999999999984

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=8.3e-44  Score=296.09  Aligned_cols=219  Identities=26%  Similarity=0.415  Sum_probs=193.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. .++.++++|++|+++++++++++.+++|++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   83 (259)
T 4e6p_A            5 RLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-PAAYAVQMDVTRQDSIDAAIAATVEHAGGL   83 (259)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHSSSC
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CCceEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999988888887775 478899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||..    ...+.++.   .
T Consensus        84 d~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---~  153 (259)
T 4e6p_A           84 DILVNNAALFD---LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQA----GRRGEALV---A  153 (259)
T ss_dssp             CEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG----GTSCCTTB---H
T ss_pred             CEEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChh----hccCCCCC---h
Confidence            99999988654   25667889999999999999999999999999997665 68999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~  228 (255)
                      .|++||++++++++.++.|++++|||||+|+| +.++|+                               ++  |+|++.
T Consensus       154 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~  232 (259)
T 4e6p_A          154 IYCATKAAVISLTQSAGLDLIKHRINVNAIAP-GVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTG  232 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEE-CCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHH
Confidence            79999999999999999999999999999999 766553                               12  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.||  +++.+.++||++|.+|||+.
T Consensus       233 ~v~~L--~s~~~~~itG~~i~vdgG~~  257 (259)
T 4e6p_A          233 MAIFL--ASAESDYIVSQTYNVDGGNW  257 (259)
T ss_dssp             HHHHT--TSGGGTTCCSCEEEESTTSS
T ss_pred             HHHHH--hCCccCCCCCCEEEECcChh
Confidence            99999  99999999999999999974

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-44  Score=300.56  Aligned_cols=221  Identities=25%  Similarity=0.390  Sum_probs=191.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||++|||++++++|+++|++|++++| +.+..++..+++.   ..++.++.+|++|+++++++++++.+
T Consensus        21 ~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  100 (281)
T 3v2h_A           21 QSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD  100 (281)
T ss_dssp             -CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence            3578999999999999999999999999999999999 4455555555543   35788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.+..
T Consensus       101 ~~g~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~  173 (281)
T 3v2h_A          101 RFGGADILVNNAGVQF---VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAH----GLVASPFK  173 (281)
T ss_dssp             HTSSCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSCCTTC
T ss_pred             HCCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcc----cccCCCCc
Confidence            9999999999988654   3566788999999999999999999999999999888889999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--H
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--I  223 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~  223 (255)
                         ..|++||++++++++.++.|++++||+||+|+| |.++|+                                ++  |
T Consensus       174 ---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~  249 (281)
T 3v2h_A          174 ---SAYVAAKHGIMGLTKTVALEVAESGVTVNSICP-GYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITV  249 (281)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCC----------------------------CCTTCSCBCH
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEC-CCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCH
Confidence               679999999999999999999999999999999 766654                                11  8


Q ss_pred             HhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          224 ASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       224 ~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|++.+++||  +++.+.++||++|.+||||+
T Consensus       250 edvA~~v~~L--~s~~a~~itG~~i~vdGG~~  279 (281)
T 3v2h_A          250 EQVASLALYL--AGDDAAQITGTHVSMDGGWT  279 (281)
T ss_dssp             HHHHHHHHHH--HSSGGGGCCSCEEEESTTGG
T ss_pred             HHHHHHHHHH--cCCCcCCCCCcEEEECCCcc
Confidence            9999999999  99999999999999999984

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-44  Score=299.89  Aligned_cols=220  Identities=24%  Similarity=0.322  Sum_probs=190.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-------------CcchHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-------------QDNLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|             +.+..++..+++.  ..++.++.+|++|+++
T Consensus         8 ~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (277)
T 3tsc_A            8 KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR   87 (277)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            578999999999999999999999999999999998             3444444444432  3578899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~  166 (255)
                      ++++++++.+++|++|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|.+++ .|+||++||.. 
T Consensus        88 v~~~~~~~~~~~g~id~lvnnAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~-  163 (277)
T 3tsc_A           88 LRKVVDDGVAALGRLDIIVANAGVAAP---QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAA-  163 (277)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC---CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHh-
Confidence            999999999999999999999886642   4667889999999999999999999999999997765 68999999543 


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------  221 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------  221 (255)
                         ...+.++.   ..|++||+++++|++.++.|++++|||||+|+| |.++|+.                         
T Consensus       164 ---~~~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (277)
T 3tsc_A          164 ---GMKMQPFM---IHYTASKHAVTGLARAFAAELGKHSIRVNSVHP-GPVNTPMGSGDMVTAVGQAMETNPQLSHVLTP  236 (277)
T ss_dssp             ---GTSCCSSC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCC
T ss_pred             ---hCCCCCCc---hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEe-CCCcCCcccchhhhhhhhcccccHHHHHHhhh
Confidence               33333333   679999999999999999999999999999999 7776641                         


Q ss_pred             -----h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 -----A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 -----~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                           +  |+|++++++||  +++.+.++||++|.+|||++
T Consensus       237 ~~p~r~~~pedvA~~v~~L--~s~~~~~itG~~i~vdGG~~  275 (277)
T 3tsc_A          237 FLPDWVAEPEDIADTVCWL--ASDESRKVTAAQIPVDQGST  275 (277)
T ss_dssp             SSSCSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             ccCCCCCCHHHHHHHHHHH--hCccccCCcCCEEeeCCCcc
Confidence                 1  79999999999  99999999999999999974

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=7.3e-44  Score=294.24  Aligned_cols=219  Identities=26%  Similarity=0.390  Sum_probs=190.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++||||++|||++++++|+++|++|++++++. +..+++.+++.  ..++.++++|++|+++++++++++.+++|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999988754 55555554442  35788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||    .....+.++.   
T Consensus        82 ~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS----~~~~~~~~~~---  151 (246)
T 3osu_A           82 SLDVLVNNAGITRD---NLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSS----VVGAVGNPGQ---  151 (246)
T ss_dssp             CCCEEEECCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----HHHHHCCTTC---
T ss_pred             CCCEEEECCCCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcc----hhhcCCCCCC---
Confidence            99999999886542   4667889999999999999999999999999998888899999994    3333333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|++||++++++++.++.|++++|||||+|+| +.++|+                    ++  |+|+++++.||  +++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l--~s~  228 (246)
T 3osu_A          152 ANYVATKAGVIGLTKSAARELASRGITVNAVAP-GFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTVAFL--ASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHHHHH--TSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEE-CCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCc
Confidence            779999999999999999999999999999999 888775                    11  89999999999  999


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||+++.+|||+.
T Consensus       229 ~~~~itG~~i~vdgG~~  245 (246)
T 3osu_A          229 KAKYITGQTIHVNGGMY  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             cccCCCCCEEEeCCCcc
Confidence            99999999999999984

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=5.9e-44  Score=299.51  Aligned_cols=222  Identities=21%  Similarity=0.277  Sum_probs=194.3

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|.++++++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34467899999999999999999999999999999999999888777766653  3578899999999999999999998


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +. +++|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+    ..+...
T Consensus       106 ~~-g~iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~----~~~~~~  177 (275)
T 4imr_A          106 AI-APVDILVINASAQIN---ATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQ----LRPKSV  177 (275)
T ss_dssp             HH-SCCCEEEECCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTT
T ss_pred             Hh-CCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh----CCCCCC
Confidence            87 999999999876542   5667889999999999999999999999999998888899999995433    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh-----HHhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA-----IASIANAA  230 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~-----~~~~~~~~  230 (255)
                         ...|++||+|++++++.++.|++++|||||+|+| |.++|+                     ++     |+|++.++
T Consensus       178 ---~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v  253 (275)
T 4imr_A          178 ---VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAP-GLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAA  253 (275)
T ss_dssp             ---BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHH
T ss_pred             ---chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEe-ccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHH
Confidence               2569999999999999999999999999999999 877775                     11     89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +||  +++.+.++||++|.+||||
T Consensus       254 ~fL--~s~~a~~itG~~i~vdGG~  275 (275)
T 4imr_A          254 LFL--ASEACSFMTGETIFLTGGY  275 (275)
T ss_dssp             HHH--HSGGGTTCCSCEEEESSCC
T ss_pred             HHH--cCcccCCCCCCEEEeCCCC
Confidence            999  9999999999999999997

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=6.1e-44  Score=296.30  Aligned_cols=216  Identities=24%  Similarity=0.375  Sum_probs=191.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.++++ .++.++.+|++|+++++++++++.+.+|++
T Consensus         5 ~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (255)
T 4eso_A            5 NYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-PRVHALRSDIADLNEIAVLGAAAGQTLGAI   83 (255)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4689999999999999999999999999999999999988888877764 578999999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||..    ...+.++.   ..
T Consensus        84 d~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~----~~~~~~~~---~~  151 (255)
T 4eso_A           84 DLLHINAGVSE---LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE--GGSIVFTSSVA----DEGGHPGM---SV  151 (255)
T ss_dssp             EEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCGG----GSSBCTTB---HH
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc--CCEEEEECChh----hcCCCCCc---hH
Confidence            99999988654   356778899999999999999999999999999854  58999999543    33333333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |++||++++++++.++.|++++|||||+|+| +.++|+                       +   +  |+|++.+++|| 
T Consensus       152 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L-  229 (255)
T 4eso_A          152 YSASKAALVSFASVLAAELLPRGIRVNSVSP-GFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFL-  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTGGGTCEEEEEEE-CSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEec-CcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 777664                       1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++ +.++||++|.+|||+.
T Consensus       230 -~s~-~~~itG~~i~vdGG~~  248 (255)
T 4eso_A          230 -AFE-ATFTTGAKLAVDGGLG  248 (255)
T ss_dssp             -HHT-CTTCCSCEEEESTTTT
T ss_pred             -cCc-CcCccCCEEEECCCcc
Confidence             888 8999999999999974

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-43  Score=297.46  Aligned_cols=223  Identities=23%  Similarity=0.350  Sum_probs=188.3

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ....+++++|+++||||++|||++++++|+++|++|++++|++. .++..+++.  ..++.++.+|++|.++++++. +.
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~-~~  100 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGSAEAVVADLADLEGAANVA-EE  100 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTH-HHHHHHHHHTTTCEEEEEECCTTCHHHHHHHH-HH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHH-HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHH-HH
Confidence            34446789999999999999999999999999999999997643 444444442  247889999999999999994 44


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.+
T Consensus       101 ~~~~g~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~----~~~~~~  173 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGIIA---RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASML----SFQGGR  173 (273)
T ss_dssp             HHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSCCS
T ss_pred             HHhcCCCcEEEECCCCCC---CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchH----hcCCCC
Confidence            566799999999988654   2567788999999999999999999999999999888889999999543    333333


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~  231 (255)
                      +.   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                      ++  |+|++.+++
T Consensus       174 ~~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~  249 (273)
T 3uf0_A          174 NV---AAYAASKHAVVGLTRALASEWAGRGVGVNALAP-GYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAV  249 (273)
T ss_dssp             SC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHH
T ss_pred             CC---hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-CCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            33   679999999999999999999999999999999 777664                      11  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +++.+.++||++|.+|||+.
T Consensus       250 ~L--~s~~a~~itG~~i~vdGG~~  271 (273)
T 3uf0_A          250 FL--ASDAASYVHGQVLAVDGGWL  271 (273)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCchhcCCcCCEEEECcCcc
Confidence            99  99999999999999999973

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=7.7e-44  Score=299.62  Aligned_cols=220  Identities=22%  Similarity=0.337  Sum_probs=190.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc------------chHHHHHHHhC--CCceEEEEeeCCCHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD------------NLGQALADKLG--HQDVCYIHCDVSNEREV   88 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~------------~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|++            +..++..+++.  ..++.++++|++|++++
T Consensus         7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   86 (281)
T 3s55_A            7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL   86 (281)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence            57899999999999999999999999999999999973            33334333322  35788999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc
Q 025252           89 INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA  168 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~  168 (255)
                      +++++++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..   
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~---  160 (281)
T 3s55_A           87 ESFVAEAEDTLGGIDIAITNAGIST---IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSML---  160 (281)
T ss_dssp             HHHHHHHHHHHTCCCEEEECCCCCC---CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG---
T ss_pred             HHHHHHHHHhcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChh---
Confidence            9999999999999999999988654   3567788999999999999999999999999999888889999999543   


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------  220 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------  220 (255)
                       ...+.++.   ..|++||++++++++.++.|++++|||||+|+| +.++|+                            
T Consensus       161 -~~~~~~~~---~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (281)
T 3s55_A          161 -GHSANFAQ---ASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAP-GNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA  235 (281)
T ss_dssp             -GGSCCTTC---HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred             -hcCCCCCC---chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CcccCccccchhhhccccccccccchhHHHHHHH
Confidence             33333333   779999999999999999999999999999999 766653                            


Q ss_pred             -------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                             ++  |+|++++++||  +++.+.++||++|.+|||+.
T Consensus       236 ~~~~~~~~~~~p~dvA~~v~~L--~s~~~~~itG~~i~vdgG~~  277 (281)
T 3s55_A          236 SLHLQYAPFLKPEEVTRAVLFL--VDEASSHITGTVLPIDAGAT  277 (281)
T ss_dssp             HHCSSSCSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             hhhccCcCCCCHHHHHHHHHHH--cCCcccCCCCCEEEECCCcc
Confidence                   11  89999999999  89999999999999999973

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=9.2e-44  Score=299.03  Aligned_cols=220  Identities=25%  Similarity=0.390  Sum_probs=190.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-------------CcchHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-------------QDNLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-------------~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|             +++.++++.+++.  ..++.++.+|++|+++
T Consensus        12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~   91 (280)
T 3pgx_A           12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA   91 (280)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence            578999999999999999999999999999999998             4455555555443  2578899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~  166 (255)
                      ++++++++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||.. 
T Consensus        92 v~~~~~~~~~~~g~id~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~-  167 (280)
T 3pgx_A           92 LRELVADGMEQFGRLDVVVANAGVLS---WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSA-  167 (280)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG-
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchh-
Confidence            99999999999999999999988654   35677889999999999999999999999999998765 78999999543 


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------  220 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------  220 (255)
                         ...+.++.   ..|++||+++++|++.++.|++++|||||+|+| +.++|+                          
T Consensus       168 ---~~~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (280)
T 3pgx_A          168 ---GLKATPGN---GHYSASKHGLTALTNTLAIELGEYGIRVNSIHP-YSVETPMIEPEAMMEIFARHPSFVHSFPPMPV  240 (280)
T ss_dssp             ---GTSCCTTB---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTT
T ss_pred             ---hccCCCCc---hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcccCcccchhhhhhhhhcCchhhhhhhhccc
Confidence               33333333   679999999999999999999999999999999 777664                          


Q ss_pred             ---Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ---EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ---~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                         ++  |+|++++++||  +++.+.++||++|.+|||+.
T Consensus       241 ~~~r~~~p~dvA~~v~~L--~s~~~~~itG~~i~vdGG~~  278 (280)
T 3pgx_A          241 QPNGFMTADEVADVVAWL--AGDGSGTLTGTQIPVDKGAL  278 (280)
T ss_dssp             BCSSCBCHHHHHHHHHHH--HSGGGTTCSSCEEEESTTGG
T ss_pred             CCCCCCCHHHHHHHHHHH--hCccccCCCCCEEEECCCcc
Confidence               01  79999999999  99999999999999999973

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-43  Score=297.50  Aligned_cols=225  Identities=26%  Similarity=0.361  Sum_probs=190.9

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHH
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      ..++.+++++|+++||||++|||++++++|+++|++|++++++. +..+++.+++.  ..++.++.+|++|+++++++++
T Consensus        22 ~mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  101 (271)
T 3v2g_A           22 SMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIR  101 (271)
T ss_dssp             HHHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             hhccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence            34445678999999999999999999999999999999986664 44555555442  3578899999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~  173 (255)
                      ++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+..   .+
T Consensus       102 ~~~~~~g~iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~g~iv~isS~~~~~---~~  173 (271)
T 3v2g_A          102 ETVEALGGLDILVNSAGIWH---SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD--GGRIITIGSNLAEL---VP  173 (271)
T ss_dssp             HHHHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCGGGTC---CC
T ss_pred             HHHHHcCCCcEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCEEEEEeChhhcc---CC
Confidence            99999999999999988654   256778899999999999999999999999999953  68999998542211   11


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALY  232 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~  232 (255)
                      .++   ...|++||+++++|++.++.|++++|||||+|+| +.++|+                   ++  |+|++.+++|
T Consensus       174 ~~~---~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~f  249 (271)
T 3v2g_A          174 WPG---ISLYSASKAALAGLTKGLARDLGPRGITVNIVHP-GSTDTDMNPADGDHAEAQRERIATGSYGEPQDIAGLVAW  249 (271)
T ss_dssp             STT---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSSSSCSSCSSHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred             CCC---chHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEec-CCCcCCcccccchhHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            222   3679999999999999999999999999999999 877765                   12  9999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.||||+.
T Consensus       250 L--~s~~~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          250 L--AGPQGKFVTGASLTIDGGAN  270 (271)
T ss_dssp             H--HSGGGTTCCSCEEEESTTTT
T ss_pred             H--hCcccCCccCCEEEeCcCcc
Confidence            9  99999999999999999984

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.3e-44  Score=297.07  Aligned_cols=220  Identities=27%  Similarity=0.350  Sum_probs=184.2

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ..+.+++|+++||||++|||++++++|+++|++|++++ |+.+..+++.+++.  ..++.++.+|++|+++++++++++.
T Consensus        21 ~~m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  100 (267)
T 3u5t_A           21 QSMMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAE  100 (267)
T ss_dssp             ------CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence            33557899999999999999999999999999999984 45555555555442  2578899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    ...+.++
T Consensus       101 ~~~g~iD~lvnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~----~~~~~~~  171 (267)
T 3u5t_A          101 EAFGGVDVLVNNAGIMP---LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV--GGRIINMSTSQ----VGLLHPS  171 (267)
T ss_dssp             HHHSCEEEEEECCCCCC---CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCTH----HHHCCTT
T ss_pred             HHcCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh--CCeEEEEeChh----hccCCCC
Confidence            99999999999988654   356778899999999999999999999999999954  58999999543    2333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l  233 (255)
                      .   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                     ++  |+|++.++.||
T Consensus       172 ~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  247 (267)
T 3u5t_A          172 Y---GIYAAAKAGVEAMTHVLSKELRGRDITVNAVAP-GPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFL  247 (267)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEE-CCBC-----------CHHHHHTSSTTCSCBCHHHHHHHHHHH
T ss_pred             c---hHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEE-CCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 877775                     11  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++.+.++||++|.+|||+
T Consensus       248 --~s~~~~~itG~~i~vdGG~  266 (267)
T 3u5t_A          248 --AGPDGAWVNGQVLRANGGI  266 (267)
T ss_dssp             --HSTTTTTCCSEEEEESSSC
T ss_pred             --hCccccCccCCEEEeCCCc
Confidence              9999999999999999997

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=2.1e-43  Score=293.67  Aligned_cols=223  Identities=28%  Similarity=0.359  Sum_probs=191.1

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .++.++.+|++|.++++++++++.+.+
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-DAALAVAADISKEADVDAAVEAALSKF   81 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            3467899999999999999999999999999999999999998888888775 578999999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC----CCcEEEeccCCCcccccccCc
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR----RGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~----~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +++|++|||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++    .++|+++||...    ..+.+
T Consensus        82 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~----~~~~~  155 (261)
T 3n74_A           82 GKVDILVNNAGIGHK--PQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA----GRPRP  155 (261)
T ss_dssp             SCCCEEEECCCCCCC--SCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT----TSCCT
T ss_pred             CCCCEEEECCccCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh----cCCCC
Confidence            999999999876542  24566778999999999999999999999999997653    678999995543    22332


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANA  229 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~  229 (255)
                      ..   ..|++||+++++|++.++.|++++||+||+|+| +.++|+                        ++  |+|++++
T Consensus       156 ~~---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  231 (261)
T 3n74_A          156 NL---AWYNATKGWVVSVTKALAIELAPAKIRVVALNP-VAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEA  231 (261)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-C-------------------------CTTSSCCCHHHHHHH
T ss_pred             Cc---cHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHH
Confidence            22   669999999999999999999999999999999 777765                        11  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +++.+.++||++|.+|||+.
T Consensus       232 ~~~l--~s~~~~~itG~~i~vdgG~~  255 (261)
T 3n74_A          232 AAFL--CSPQASMITGVALDVDGGRS  255 (261)
T ss_dssp             HHHH--TSGGGTTCCSCEEEESTTTT
T ss_pred             HHHH--cCCcccCcCCcEEEecCCcc
Confidence            9999  89999999999999999974

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-43  Score=298.49  Aligned_cols=222  Identities=22%  Similarity=0.284  Sum_probs=186.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.+|+++||||++|||++++++|+++|++|++++| +++..++..+++.  ..++.++++|++|+++++++++++.+.+
T Consensus        26 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  105 (280)
T 4da9_A           26 QKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF  105 (280)
T ss_dssp             CCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred             ccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999986 5555666555543  2578999999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCcC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      |++|+||||||..... ..++.+.+.++|++++++|+.++++++++++|.|++++   .|+||++||..+    ..+.++
T Consensus       106 g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~----~~~~~~  180 (280)
T 4da9_A          106 GRIDCLVNNAGIASIV-RDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSA----VMTSPE  180 (280)
T ss_dssp             SCCCEEEEECC-------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------C
T ss_pred             CCCCEEEECCCccccC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhh----ccCCCC
Confidence            9999999998863221 25677889999999999999999999999999997655   689999995543    233333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l  233 (255)
                      .   ..|++||+|++++++.++.|++++|||||+|+| |.++|+                  +   +  |+|++.+++||
T Consensus       181 ~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L  256 (280)
T 4da9_A          181 R---LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRP-GIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPEDIGNIVAGL  256 (280)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCBCC----------------------CCBCHHHHHHHHHHH
T ss_pred             c---cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEee-cCCcCCchhhcchhHHHHHhhcCCCcCCcCCHHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 777765                  1   1  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||++|.+|||+.
T Consensus       257 --~s~~~~~itG~~i~vdGG~~  276 (280)
T 4da9_A          257 --AGGQFGFATGSVIQADGGLS  276 (280)
T ss_dssp             --HTSTTGGGTTCEEEESTTCC
T ss_pred             --hCccccCCCCCEEEECCCcc
Confidence              99999999999999999984

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2e-43  Score=297.70  Aligned_cols=223  Identities=22%  Similarity=0.275  Sum_probs=189.7

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-------hHHHHHHHhC--CCceEEEEeeCCCHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-------LGQALADKLG--HQDVCYIHCDVSNEREVI   89 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-------~~~~~~~~~~--~~~~~~~~~D~~~~~~~~   89 (255)
                      |..+++++|+++||||++|||++++++|+++|++|++++|+.+       .+++..+++.  ..++.++++|++|+++++
T Consensus         2 p~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~   81 (285)
T 3sc4_A            2 PGSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVA   81 (285)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHH
Confidence            3457789999999999999999999999999999999999876       2334433332  257889999999999999


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC  169 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~  169 (255)
                      ++++++.+.+|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+.. 
T Consensus        82 ~~~~~~~~~~g~id~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~-  157 (285)
T 3sc4_A           82 AAVAKTVEQFGGIDICVNNASAIN---LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLE-  157 (285)
T ss_dssp             HHHHHHHHHHSCCSEEEECCCCCC---CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCS-
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhcc-
Confidence            999999999999999999988664   3567788999999999999999999999999999988889999999654322 


Q ss_pred             ccccC-cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------Hh--HHhhhhhhhhh
Q 025252          170 TEIEG-LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------EA--IASIANAALYN  233 (255)
Q Consensus       170 ~~~~~-~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------~~--~~~~~~~~~~l  233 (255)
                         +. ++.   ..|++||++++++++.++.|++++|||||+|+||..++|+             ++  |+|++.+++++
T Consensus       158 ---~~~~~~---~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~~~~~~~~r~~~pedvA~~~~~l  231 (285)
T 3sc4_A          158 ---PKWLRP---TPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLLGGDEAMARSRKPEVYADAAYVV  231 (285)
T ss_dssp             ---GGGSCS---HHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHHTSCCCCTTCBCTHHHHHHHHHH
T ss_pred             ---CCCCCC---chHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhccccccccCCCCHHHHHHHHHHH
Confidence               21 222   6799999999999999999999999999999994366665             12  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++.+ ++||+++.+|||+
T Consensus       232 --~s~~~-~~tG~~i~~dgg~  249 (285)
T 3sc4_A          232 --LNKPS-SYTGNTLLCEDVL  249 (285)
T ss_dssp             --HTSCT-TCCSCEEEHHHHH
T ss_pred             --hCCcc-cccceEEEEcCch
Confidence              88888 9999999999986

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=4.8e-43  Score=293.19  Aligned_cols=220  Identities=27%  Similarity=0.425  Sum_probs=188.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++|+++||||++|||++++++|+++|++|++++++. +..+++.+++.  ..++.++.+|++|+++++++++++.++
T Consensus        14 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   93 (270)
T 3is3_A           14 GRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAH   93 (270)
T ss_dssp             TCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468999999999999999999999999999999987654 44555554442  357889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||....   ..+.++  
T Consensus        94 ~g~id~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~isS~~~~---~~~~~~--  163 (270)
T 3is3_A           94 FGHLDIAVSNSGVVS---FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE--GGRIVLTSSNTSK---DFSVPK--  163 (270)
T ss_dssp             HSCCCEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT--TCEEEEECCTTTT---TCCCTT--
T ss_pred             cCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--CCeEEEEeCchhc---cCCCCC--
Confidence            999999999988654   356778899999999999999999999999999964  6899999965421   112222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------H---h--HH
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------E---A--IA  224 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~---~--~~  224 (255)
                       ...|++||+++++|++.++.|++++|||||+|+| |.++|+                             +   +  |+
T Consensus       164 -~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~  241 (270)
T 3is3_A          164 -HSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAP-GGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQ  241 (270)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHH
T ss_pred             -CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-CCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHH
Confidence             2679999999999999999999999999999999 766554                             1   1  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |++.+++||  +++.+.++||++|.+|||++
T Consensus       242 dvA~~v~~L--~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          242 DVANVVGFL--VSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHHH--TSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHH--cCCccCCccCcEEEeCCCCC
Confidence            999999999  99999999999999999985

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.7e-43  Score=291.81  Aligned_cols=221  Identities=27%  Similarity=0.358  Sum_probs=181.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++. .++.++.+|++|+++++++++++.+++|+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (257)
T 3tpc_A            3 MQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELG-AAVRFRNADVTNEADATAALAFAKQEFGH   81 (257)
T ss_dssp             -CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-------------CEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            46789999999999999999999999999999999999888777776664 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCc-cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEeccCCCcccccccC
Q 025252          102 LDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       102 id~li~~a~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +|+||||||....... ....+.+.++|++++++|+.++++++++++|.|+++      +.|+||++||..    ...+.
T Consensus        82 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~----~~~~~  157 (257)
T 3tpc_A           82 VHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIA----AFDGQ  157 (257)
T ss_dssp             CCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH----HHHCC
T ss_pred             CCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechh----hccCC
Confidence            9999999886643211 122367889999999999999999999999999874      578999999543    33333


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAAL  231 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~  231 (255)
                      ++.   ..|++||++++++++.++.|++++|||||+|+| |.++|+                     ++  |+|++.++.
T Consensus       158 ~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~~r~~~~~dva~~v~  233 (257)
T 3tpc_A          158 IGQ---AAYAASKGGVAALTLPAARELARFGIRVVTIAP-GIFDTPMMAGMPQDVQDALAASVPFPPRLGRAEEYAALVK  233 (257)
T ss_dssp             TTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBSCC--------------CCSSSSCSCBCHHHHHHHHH
T ss_pred             CCC---cchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEe-CCCCChhhccCCHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            333   679999999999999999999999999999999 877775                     12  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +++  .++||++|.+|||++
T Consensus       234 ~l--~s~--~~itG~~i~vdGG~~  253 (257)
T 3tpc_A          234 HI--CEN--TMLNGEVIRLDGALR  253 (257)
T ss_dssp             HH--HHC--TTCCSCEEEESTTCC
T ss_pred             HH--ccc--CCcCCcEEEECCCcc
Confidence            99  665  799999999999985

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.4e-43  Score=296.15  Aligned_cols=221  Identities=23%  Similarity=0.319  Sum_probs=185.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------cchHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ------------DNLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++.  ..++.++++|++|+++
T Consensus         9 ~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   88 (278)
T 3sx2_A            9 GPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRES   88 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence            56899999999999999999999999999999999987            344444433332  2578999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~  166 (255)
                      ++++++++.+.+|++|+||||||....       ..+.++|++++++|+.++++++++++|.|.+++ .|+||++||..+
T Consensus        89 v~~~~~~~~~~~g~id~lv~nAg~~~~-------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~  161 (278)
T 3sx2_A           89 LSAALQAGLDELGRLDIVVANAGIAPM-------SAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG  161 (278)
T ss_dssp             HHHHHHHHHHHHCCCCEEEECCCCCCC-------SSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCC-------CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence            999999999999999999999886542       125899999999999999999999999997764 689999996543


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------  221 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------  221 (255)
                      ........++.   ..|++||+++++|++.++.|++++|||||+|+| +.++|+.                         
T Consensus       162 ~~~~~~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (278)
T 3sx2_A          162 LAGVGSADPGS---VGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHP-SGVETPMINNEFTREWLAKMAAATDTPGAMGN  237 (278)
T ss_dssp             TSCCCCSSHHH---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCBSSTTTSSHHHHHHHHHHHHHCC--CTTSC
T ss_pred             cCCCccCCCCc---hHhHHHHHHHHHHHHHHHHHHhccCcEEEEEec-CCccCccchhhhHHHHHhhccchhhhhhhhhh
Confidence            22111111222   569999999999999999999999999999999 7776641                         


Q ss_pred             -----h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 -----A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 -----~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                           +  |+|++.+++||  +++.+.++||++|.+|||+.
T Consensus       238 ~~p~~~~~p~dvA~~v~~l--~s~~~~~itG~~i~vdGG~~  276 (278)
T 3sx2_A          238 AMPVEVLAPEDVANAVAWL--VSDQARYITGVTLPVDAGFL  276 (278)
T ss_dssp             SSSCSSBCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTTT
T ss_pred             hcCcCcCCHHHHHHHHHHH--hCcccccccCCEEeECCCcc
Confidence                 1  79999999999  99999999999999999984

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.7e-43  Score=291.22  Aligned_cols=228  Identities=29%  Similarity=0.446  Sum_probs=191.9

Q ss_pred             cCccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh-C--CCceEEEEeeCCCHHHHHHHH
Q 025252           16 PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-G--HQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        16 ~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      ++.++..++++|+++||||++|||++++++|+++|++|++++|+++..++..+++ .  ..++.++.+|++|++++++++
T Consensus        11 ~~~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~   90 (267)
T 1vl8_A           11 HHMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLL   90 (267)
T ss_dssp             ------CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHH
Confidence            3455566799999999999999999999999999999999999987776665554 1  246888999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||...   ...
T Consensus        91 ~~~~~~~g~iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~---~~~  164 (267)
T 1vl8_A           91 EAVKEKFGKLDTVVNAAGINR---RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV---EEV  164 (267)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG---TCC
T ss_pred             HHHHHHcCCCCEEEECCCcCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcch---hcc
Confidence            999999999999999987654   24567789999999999999999999999999998887899999995431   222


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIAN  228 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~  228 (255)
                      +.++   ...|++||++++++++.++.|++++||+||+|+| +.++|+                   +   +  |+|++.
T Consensus       165 ~~~~---~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~  240 (267)
T 1vl8_A          165 TMPN---ISAYAASKGGVASLTKALAKEWGRYGIRVNVIAP-GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKG  240 (267)
T ss_dssp             CSSS---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred             CCCC---ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-ccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHH
Confidence            2222   2679999999999999999999999999999999 665543                   1   1  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .++++  +++.+.+++|+++.+|||++
T Consensus       241 ~v~~l--~s~~~~~itG~~i~vdGG~~  265 (267)
T 1vl8_A          241 VAVFL--ASEEAKYVTGQIIFVDGGWT  265 (267)
T ss_dssp             HHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHH--cCccccCCcCCeEEECCCCC
Confidence            99999  88889999999999999974

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=1.4e-43  Score=295.25  Aligned_cols=219  Identities=24%  Similarity=0.359  Sum_probs=183.0

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|..   +.++++.+++.  ..++.++.+|++|+++++++++++
T Consensus         6 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   85 (262)
T 3ksu_A            6 YHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFA   85 (262)
T ss_dssp             CSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999987653   34555555543  247889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|+||||||....   .++.+.+.++|++++++|+.++++++++++|.|+  +.|+||++||..    ...+.+
T Consensus        86 ~~~~g~iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~--~~g~iv~isS~~----~~~~~~  156 (262)
T 3ksu_A           86 EKEFGKVDIAINTVGKVLK---KPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMN--PNGHIITIATSL----LAAYTG  156 (262)
T ss_dssp             HHHHCSEEEEEECCCCCCS---SCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEEEEEECCCH----HHHHHC
T ss_pred             HHHcCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhc--CCCEEEEEechh----hccCCC
Confidence            9999999999999886542   5667889999999999999999999999999993  468999999543    222222


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALY  232 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~  232 (255)
                      ..   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                     ++  |+|++.+++|
T Consensus       157 ~~---~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~  232 (262)
T 3ksu_A          157 FY---STYAGNKAPVEHYTRAASKELMKQQISVNAIAP-GPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAPIIKF  232 (262)
T ss_dssp             CC---CC-----CHHHHHHHHHHHHTTTTTCEEEEEEE-CCCCTHHHHTCC------------CCCCSCCGGGTHHHHHH
T ss_pred             CC---chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee-CCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHHHHHH
Confidence            23   669999999999999999999999999999999 888775                     12  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++ +.++||++|.+|||+.
T Consensus       233 L--~s~-~~~itG~~i~vdGg~~  252 (262)
T 3ksu_A          233 L--TTD-GWWINGQTIFANGGYT  252 (262)
T ss_dssp             H--HTT-TTTCCSCEEEESTTCC
T ss_pred             H--cCC-CCCccCCEEEECCCcc
Confidence            9  888 8999999999999984

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-43  Score=290.42  Aligned_cols=220  Identities=24%  Similarity=0.314  Sum_probs=194.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4789999999999999999999999999999999999888777766553  24788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|.+++.++|+++||..    ...+.++.   
T Consensus        82 ~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---  151 (247)
T 3lyl_A           82 AIDILVNNAGITRD---NLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVV----GSAGNPGQ---  151 (247)
T ss_dssp             CCSEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH----HHHCCTTC---
T ss_pred             CCCEEEECCCCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchh----hccCCCCc---
Confidence            99999999876542   456678999999999999999999999999999888889999999543    33333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|++||++++++++.++.|++++||+||+|+| +.++|+                    ++  |+|++.++.++  +++
T Consensus       152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l--~s~  228 (247)
T 3lyl_A          152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAP-GFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVAFL--ASE  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHHHH--HSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEee-CcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHH--hCC
Confidence            679999999999999999999999999999999 877765                    11  89999999999  889


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||+++.+|||+.
T Consensus       229 ~~~~~tG~~i~vdgG~~  245 (247)
T 3lyl_A          229 EAKYITGQTLHVNGGMY  245 (247)
T ss_dssp             GGTTCCSCEEEESTTSS
T ss_pred             CcCCccCCEEEECCCEe
Confidence            99999999999999984

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=7.5e-43  Score=298.44  Aligned_cols=220  Identities=27%  Similarity=0.392  Sum_probs=188.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------cchHHHHHHHhC--CCceEEEEeeCCCHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ------------DNLGQALADKLG--HQDVCYIHCDVSNEREV   88 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~------------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+            .+.+++..+++.  ..++.++.+|++|++++
T Consensus        43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v  122 (317)
T 3oec_A           43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASL  122 (317)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            3689999999999999999999999999999999876            333444443332  35789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCc
Q 025252           89 INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTT  167 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~  167 (255)
                      +++++++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++ .|+||++||..  
T Consensus       123 ~~~~~~~~~~~g~iD~lVnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~--  197 (317)
T 3oec_A          123 QAVVDEALAEFGHIDILVSNVGISN---QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV--  197 (317)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG--
T ss_pred             HHHHHHHHHHcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH--
Confidence            9999999999999999999988654   25677889999999999999999999999999997665 68999999543  


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------  220 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------  220 (255)
                        ...+.++.   ..|++||+++++|++.++.|++++||+||+|+| |.++|+                           
T Consensus       198 --~~~~~~~~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (317)
T 3oec_A          198 --GLRGAPGQ---SHYAASKHGVQGLMLSLANEVGRHNIRVNSVNP-GAVNTEMALNEKLLKMFLPHLENPTREDAAELF  271 (317)
T ss_dssp             --GSSCCTTB---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHH
T ss_pred             --hcCCCCCC---cchHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CcccCccccchhhhhhhhhhccccchhHHHHHH
Confidence              33333333   679999999999999999999999999999999 777664                           


Q ss_pred             --------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 --------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 --------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                              ++  |+|++.+++||  +++.+.++||++|.||||+.
T Consensus       272 ~~~~~~p~~~~~pedvA~av~fL--~s~~a~~itG~~i~vdGG~~  314 (317)
T 3oec_A          272 SQLTLLPIPWVEPEDVSNAVAWL--ASDEARYIHGAAIPVDGGQL  314 (317)
T ss_dssp             TTTCSSSSSSBCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTGG
T ss_pred             hhhccCCCCCCCHHHHHHHHHHH--cCCcccCCCCCEEEECcchh
Confidence                    11  79999999999  99999999999999999974

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=4.3e-43  Score=297.20  Aligned_cols=223  Identities=22%  Similarity=0.259  Sum_probs=188.4

Q ss_pred             eeeecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+++++|+++||||++  |||++++++|+++|++|++++|+++..+.+.+... ...+.++++|++|+++++++++++.+
T Consensus        25 ~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (296)
T 3k31_A           25 GMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAE  104 (296)
T ss_dssp             CCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            3458899999999997  99999999999999999999999765443332221 13578899999999999999999999


Q ss_pred             HcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+|++|+||||||..... ...++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    ...+.++
T Consensus       105 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~g~IV~isS~~----~~~~~~~  178 (296)
T 3k31_A          105 EWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN--GGSILTLSYYG----AEKVVPH  178 (296)
T ss_dssp             HHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT--CEEEEEEECGG----GTSCCTT
T ss_pred             HcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCEEEEEEehh----hccCCCC
Confidence            999999999998865421 0145677899999999999999999999999999954  68999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+                      ++  |+|++.+++|
T Consensus       179 ~---~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~f  254 (296)
T 3k31_A          179 Y---NVMGVCKAALEASVKYLAVDLGKQQIRVNAISA-GPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALY  254 (296)
T ss_dssp             T---THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             c---hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEE-CCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 877774                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       255 L--~s~~a~~itG~~i~vdGG~~  275 (296)
T 3k31_A          255 L--LSDLGRGTTGETVHVDCGYH  275 (296)
T ss_dssp             H--HSGGGTTCCSCEEEESTTGG
T ss_pred             H--cCCccCCccCCEEEECCCcc
Confidence            9  99999999999999999974

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=5.1e-43  Score=290.12  Aligned_cols=223  Identities=27%  Similarity=0.444  Sum_probs=181.2

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999888777776653  35788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++|||||..+.....++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+.          
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----------  152 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW----------  152 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc----------
Confidence            9999999999988754333456678899999999999999999999999999988888999999965432          


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~  234 (255)
                      .+...|++||++++++++.++.|++++||+||+|+| +.++|+                     ++  |+|+++++.++ 
T Consensus       153 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  230 (253)
T 3qiv_A          153 LYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAP-GPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDLVGMCLFL-  230 (253)
T ss_dssp             -------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHH-
T ss_pred             CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEe-cCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHHHHHHHHH-
Confidence            122569999999999999999999999999999999 888775                     11  79999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...++||+++.+|||+.
T Consensus       231 -~s~~~~~~tG~~~~vdgG~~  250 (253)
T 3qiv_A          231 -LSDEASWITGQIFNVDGGQI  250 (253)
T ss_dssp             -HSGGGTTCCSCEEEC-----
T ss_pred             -cCccccCCCCCEEEECCCee
Confidence             88999999999999999973

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=4.8e-43  Score=293.81  Aligned_cols=222  Identities=25%  Similarity=0.304  Sum_probs=188.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-------HHHHHHHhC--CCceEEEEeeCCCHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-------GQALADKLG--HQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       .++..+++.  ..++.++.+|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            57899999999999999999999999999999999998653       333333332  257889999999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +++.+++|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+..... 
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~-  157 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIW---LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAW-  157 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC---CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHH-
T ss_pred             HHHHHHcCCCCEEEECCCccc---CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCC-
Confidence            999999999999999988654   2466778999999999999999999999999999988889999999654332210 


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------Hh--HHhhhhhhhhhhccCCC
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------~~--~~~~~~~~~~l~~~~~~  239 (255)
                       .++.   ..|++||++++++++.++.|++++|||||+|+||..++|+           ++  |+|++.++++|  +++.
T Consensus       158 -~~~~---~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l--~s~~  231 (274)
T 3e03_A          158 -WGAH---TGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRRPEIMADAAHAV--LTRE  231 (274)
T ss_dssp             -HHHC---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC-------CCCGGGSBCTHHHHHHHHHH--HTSC
T ss_pred             -CCCC---chHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcccccccccCCHHHHHHHHHHH--hCcc
Confidence             1122   5699999999999999999999999999999994367665           11  99999999999  8999


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                      +.++||+++ +|||+
T Consensus       232 ~~~itG~~i-~~~g~  245 (274)
T 3e03_A          232 AAGFHGQFL-IDDEV  245 (274)
T ss_dssp             CTTCCSCEE-EHHHH
T ss_pred             ccccCCeEE-EcCcc
Confidence            999999999 78775

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=8.3e-43  Score=293.39  Aligned_cols=221  Identities=24%  Similarity=0.362  Sum_probs=187.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++++|+++||||++|||++++++|+++|++|++++|+.+.++++.++.+ .++.++.+|++++++++++++++.+.+|+
T Consensus         1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHG-GNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTB-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcC-CcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            35789999999999999999999999999999999999888888777654 57899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccC-c-cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          102 LDILVNSGCNLEYRG-F-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       102 id~li~~a~~~~~~~-~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +|+||||||...... . ....+.+.++|++++++|+.++++++++++|.|+++ +|+||++||..    ...+.++.  
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~-~g~iv~isS~~----~~~~~~~~--  152 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS-RGSVVFTISNA----GFYPNGGG--  152 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGG----GTSSSSSC--
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCeEEEEecch----hccCCCCC--
Confidence            999999988653211 1 122345567899999999999999999999999765 48999999543    33333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------Hh--HHhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------EA--IASIA  227 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~~--~~~~~  227 (255)
                       ..|++||++++++++.++.|++++ ||||+|+| |.++|+                              ++  |+|++
T Consensus       153 -~~Y~asKaa~~~l~~~la~e~~~~-Irvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA  229 (281)
T 3zv4_A          153 -PLYTATKHAVVGLVRQMAFELAPH-VRVNGVAP-GGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYT  229 (281)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEEE-CSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGS
T ss_pred             -chhHHHHHHHHHHHHHHHHHhcCC-CEEEEEEC-CcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHH
Confidence             679999999999999999999987 99999999 777664                              11  89999


Q ss_pred             hhhhhhhccC-CCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKD-DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~-~~~~~~~G~~i~~dgG~~  255 (255)
                      .+++||  ++ +.+.++||++|.+|||++
T Consensus       230 ~~v~fL--~s~~~~~~itG~~i~vdGG~~  256 (281)
T 3zv4_A          230 GAYVFF--ATRGDSLPATGALLNYDGGMG  256 (281)
T ss_dssp             HHHHHH--HSTTTSTTCSSCEEEESSSGG
T ss_pred             HHHHHh--hcccccccccCcEEEECCCCc
Confidence            999999  88 888999999999999974

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1.2e-42  Score=289.17  Aligned_cols=218  Identities=18%  Similarity=0.249  Sum_probs=181.6

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ....+++++|+++||||++|||++++++|+++|++|++++|+++...+...+.   ++.++.+|++|+++++++++++.+
T Consensus        19 ~~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           19 FQGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA---GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             --------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH---TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc---CCeEEECCCCCHHHHHHHHHHHHH
Confidence            34456789999999999999999999999999999999999987655544443   478899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+|++|+||||||.....   . .+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.
T Consensus        96 ~~g~iD~lv~nAg~~~~~---~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~  167 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAE---T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDV----TRKGSSKH  167 (260)
T ss_dssp             HCSCCSEEEECCCCCCCC---C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGG----GGTCCSSC
T ss_pred             hcCCCCEEEECCCccCCC---C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChh----hcCCCCCc
Confidence            999999999998865422   2 456789999999999999999999999999888889999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh--HHhhhhhhhhhhccC
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~--~~~~~~~~~~l~~~~  237 (255)
                         ..|++||+++++|++.++.|+++ +||||+|+| +.++|+                  ++  |+|++.+++||  + 
T Consensus       168 ---~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v~P-G~v~t~~~~~~~~~~~~~~~~p~~r~~~~edva~~v~~L--~-  239 (260)
T 3gem_A          168 ---IAYCATKAGLESLTLSFAARFAP-LVKVNGIAP-ALLMFQPKDDAAYRANALAKSALGIEPGAEVIYQSLRYL--L-  239 (260)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHTT-TCEEEEEEE-CTTCC---------------CCSCCCCCTHHHHHHHHHH--H-
T ss_pred             ---HhHHHHHHHHHHHHHHHHHHHCC-CCEEEEEee-cccccCCCCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--h-
Confidence               67999999999999999999998 699999999 777765                  11  89999999999  5 


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                       .+.++||++|.||||++
T Consensus       240 -~~~~itG~~i~vdGG~~  256 (260)
T 3gem_A          240 -DSTYVTGTTLTVNGGRH  256 (260)
T ss_dssp             -HCSSCCSCEEEESTTTT
T ss_pred             -hCCCCCCCEEEECCCcc
Confidence             47799999999999984

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-42  Score=285.94  Aligned_cols=216  Identities=32%  Similarity=0.464  Sum_probs=189.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++   .+.++.+|++|+++++++++++.+.+|++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGRL   78 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            468999999999999999999999999999999999988777766654   27889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..     ..+.++.   ..
T Consensus        79 d~lvn~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-----~~~~~~~---~~  147 (245)
T 1uls_A           79 DGVVHYAGITR---DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-----YLGNLGQ---AN  147 (245)
T ss_dssp             CEEEECCCCCC---CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-----GGCCTTC---HH
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-----hcCCCCc---hh
Confidence            99999987654   2456778999999999999999999999999999888889999999543     2222222   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+                 +   +  |+|++..++++  +++.+
T Consensus       148 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l--~s~~~  224 (245)
T 1uls_A          148 YAASMAGVVGLTRTLALELGRWGIRVNTLAP-GFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFL--LSDES  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--HSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhHhCeEEEEEEe-CcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHHHH--hCchh
Confidence            9999999999999999999999999999999 766654                 1   1  89999999999  88889


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .++||+++.+|||+.
T Consensus       225 ~~~tG~~~~vdgG~~  239 (245)
T 1uls_A          225 SFITGQVLFVDGGRT  239 (245)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCCcCCEEEECCCcc
Confidence            999999999999974

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=5.2e-43  Score=292.54  Aligned_cols=217  Identities=22%  Similarity=0.336  Sum_probs=187.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    ...+.++.+|++++++++++++    
T Consensus         6 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~----   81 (267)
T 3t4x_A            6 MQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE----   81 (267)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH----
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH----
Confidence            56889999999999999999999999999999999999887766665542    3467889999999998877654    


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++|++|++|||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.
T Consensus        82 ~~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~  154 (267)
T 3t4x_A           82 KYPKVDILINNLGIFEP---VEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEA----AIMPSQEM  154 (267)
T ss_dssp             HCCCCSEEEECCCCCCC---CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGG----GTSCCTTC
T ss_pred             hcCCCCEEEECCCCCCC---CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchh----hccCCCcc
Confidence            56899999999886542   456778999999999999999999999999999888889999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------------Hh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------------EA  222 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------------~~  222 (255)
                         ..|++||++++++++.++.|++++|||||+|+| |.++|+                                   ++
T Consensus       155 ---~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  230 (267)
T 3t4x_A          155 ---AHYSATKTMQLSLSRSLAELTTGTNVTVNTIMP-GSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRL  230 (267)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEE-CCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSC
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC-CeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCc
Confidence               779999999999999999999999999999999 766554                                   11


Q ss_pred             --HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          223 --IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        |+|++.+++||  +++.+.++||++|.+|||+.
T Consensus       231 ~~pedvA~~v~fL--~s~~~~~itG~~i~vdGG~~  263 (267)
T 3t4x_A          231 IRPEEIAHLVTFL--SSPLSSAINGSALRIDGGLV  263 (267)
T ss_dssp             BCTHHHHHHHHHH--HSGGGTTCCSCEEEESTTCS
T ss_pred             cCHHHHHHHHHHH--cCccccCccCCeEEECCCcc
Confidence              89999999999  99999999999999999984

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=3e-42  Score=287.60  Aligned_cols=221  Identities=25%  Similarity=0.320  Sum_probs=193.3

Q ss_pred             eeecCeEEEEecCC-ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGA-SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas-~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||+ +|||++++++|+++|++|++++|+.+..++..+++.   ..++.++.+|++|+++++++++++.+
T Consensus        18 ~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   97 (266)
T 3o38_A           18 GLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVE   97 (266)
T ss_dssp             STTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            45899999999998 599999999999999999999999888777776663   25799999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .++++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|+|+++ +.++|+++||..    ...+.++
T Consensus        98 ~~g~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~----~~~~~~~  170 (266)
T 3o38_A           98 KAGRLDVLVNNAGLGG---QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVL----GWRAQHS  170 (266)
T ss_dssp             HHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGG----GTCCCTT
T ss_pred             HhCCCcEEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHH----HcCCCCC
Confidence            9999999999988654   2566778999999999999999999999999999876 678999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYN  233 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l  233 (255)
                         ...|++||++++++++.++.|++++||+||+|+| +.++|+                     ++  |+|++.+++|+
T Consensus       171 ---~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~i~~l  246 (266)
T 3o38_A          171 ---QSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSP-SIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFL  246 (266)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCC-----------------CCTTSSCCCHHHHHHHHHHH
T ss_pred             ---CchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeC-CcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence               3779999999999999999999999999999999 777765                     11  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||++|.+|||++
T Consensus       247 --~s~~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          247 --ASDYSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             --HSGGGTTCCSCEEEESSCCC
T ss_pred             --cCccccCccCCEEEEcCCcC
Confidence              88999999999999999985

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=7.7e-43  Score=290.28  Aligned_cols=219  Identities=25%  Similarity=0.330  Sum_probs=186.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|+++ +++.+..++..+++.  ..++.++.+|++|+++++++++++.++
T Consensus         4 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (259)
T 3edm_A            4 QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADK   83 (259)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999998 556665565555543  257889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-ccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-IEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-~~~~~~  177 (255)
                      +|++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    .. .+.++ 
T Consensus        84 ~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~g~iv~isS~~----~~~~~~~~-  154 (259)
T 3edm_A           84 FGEIHGLVHVAGGLIA--RKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK--GGAIVTFSSQA----GRDGGGPG-  154 (259)
T ss_dssp             HCSEEEEEECCCCCCC--CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHH----HHHCCSTT-
T ss_pred             hCCCCEEEECCCccCC--CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEcCHH----hccCCCCC-
Confidence            9999999999875422  256778899999999999999999999999999965  68999999543    22 22222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l~  234 (255)
                        ...|++||++++++++.++.|++++ ||||+|+| |.++|+                  +   +  |+|++.++.|| 
T Consensus       155 --~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L-  229 (259)
T 3edm_A          155 --ALAYATSKGAVMTFTRGLAKEVGPK-IRVNAVCP-GMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFL-  229 (259)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEE-CCBCC----------------------CCBCHHHHHHHHHHH-
T ss_pred             --cHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEE-CCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence              2679999999999999999999987 99999999 777775                  1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||++|.+|||+.
T Consensus       230 -~s~~~~~itG~~i~vdGg~~  249 (259)
T 3edm_A          230 -ASDDAAYVTGACYDINGGVL  249 (259)
T ss_dssp             -HSGGGTTCCSCEEEESBCSS
T ss_pred             -cCccccCccCCEEEECCCcC
Confidence             99999999999999999974

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2e-42  Score=292.52  Aligned_cols=220  Identities=27%  Similarity=0.340  Sum_probs=187.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+. .++..+...  ..++.++.+|++|+++++++++++.++
T Consensus        43 ~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  122 (291)
T 3ijr_A           43 EKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQ  122 (291)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998764 333333322  257889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+|||||+....  ..++.+.+.++|++++++|+.++++++++++|.|++  .++||++||..    ...+.++. 
T Consensus       123 ~g~iD~lvnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~iv~isS~~----~~~~~~~~-  193 (291)
T 3ijr_A          123 LGSLNILVNNVAQQYP--QQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ--GDVIINTASIV----AYEGNETL-  193 (291)
T ss_dssp             HSSCCEEEECCCCCCC--CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT--TCEEEEECCTH----HHHCCTTC-
T ss_pred             cCCCCEEEECCCCcCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--CCEEEEEechH----hcCCCCCC-
Confidence            9999999999876432  245677899999999999999999999999999953  57999999543    33333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~  235 (255)
                        ..|++||+++++|++.++.|++++|||||+|+| +.++|+                     ++  |+|++.+++||  
T Consensus       194 --~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L--  268 (291)
T 3ijr_A          194 --IDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAP-GPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPAYVYL--  268 (291)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHHHHHH--
T ss_pred             --hhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEee-CCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHHHHHH--
Confidence              679999999999999999999999999999999 877765                     11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||++|.+|||+.
T Consensus       269 ~s~~~~~itG~~i~vdGG~~  288 (291)
T 3ijr_A          269 ASSDSSYVTGQMIHVNGGVI  288 (291)
T ss_dssp             HSGGGTTCCSCEEEESSSCC
T ss_pred             hCCccCCCcCCEEEECCCcc
Confidence            89999999999999999974

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.8e-42  Score=285.93  Aligned_cols=219  Identities=30%  Similarity=0.449  Sum_probs=189.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |++|+++||||++|||++++++|+++|++|++++| +++..+++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            67899999999999999999999999999999999 7666666655542  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..    ...+.++.   
T Consensus        82 ~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---  151 (246)
T 2uvd_A           82 QVDILVNNAGVTK---DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVV----GVTGNPGQ---  151 (246)
T ss_dssp             CCCEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH----HHHCCTTB---
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHH----hcCCCCCC---
Confidence            9999999987654   2456678999999999999999999999999999877789999999543    22222222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|++||++++++++.++.|++++||+||+|+| +.++|+                    ++  |+|++..+.++  +++
T Consensus       152 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l--~s~  228 (246)
T 2uvd_A          152 ANYVAAKAGVIGLTKTSAKELASRNITVNAIAP-GFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAVTFF--ASD  228 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHHHHH--HSG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-ccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCc
Confidence            679999999999999999999999999999999 777664                    11  89999999999  888


Q ss_pred             CCCeeeceeEEecCCcC
Q 025252          239 DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~~  255 (255)
                      .+.++||+++.+|||+.
T Consensus       229 ~~~~~tG~~~~vdgG~~  245 (246)
T 2uvd_A          229 QSKYITGQTLNVDGGMV  245 (246)
T ss_dssp             GGTTCCSCEEEESTTSC
T ss_pred             hhcCCCCCEEEECcCcc
Confidence            89999999999999974

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.6e-42  Score=289.83  Aligned_cols=215  Identities=28%  Similarity=0.412  Sum_probs=185.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +...++++|+++||||++|||++++++|+++|++|++++|+++...        ..+..+++|++|+++++++++++.+.
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV--------NVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT--------TSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc--------CceeEEEecCCCHHHHHHHHHHHHHH
Confidence            3345689999999999999999999999999999999999876541        35678899999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++. 
T Consensus        79 ~g~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~-  150 (269)
T 3vtz_A           79 YGRIDILVNNAGIEQ---YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQ----SYAATKNA-  150 (269)
T ss_dssp             HSCCCEEEECCCCCC---CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSBCTTC-
T ss_pred             cCCCCEEEECCCcCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchh----hccCCCCC-
Confidence            999999999988654   3566778999999999999999999999999999888889999999543    33333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------------h--HHh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------------A--IAS  225 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------------~--~~~  225 (255)
                        ..|++||++++++++.++.|+++ ||+||+|+| |.++|+.                               +  |+|
T Consensus       151 --~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  226 (269)
T 3vtz_A          151 --AAYVTSKHALLGLTRSVAIDYAP-KIRCNAVCP-GTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEE  226 (269)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHTT-TEEEEEEEE-CSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             --hhHHHHHHHHHHHHHHHHHHhcC-CCEEEEEEE-CCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHH
Confidence              67999999999999999999998 899999999 7776641                               1  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++++||  +++.+.++||++|.+|||+.
T Consensus       227 vA~~v~~L--~s~~~~~itG~~i~vdGG~~  254 (269)
T 3vtz_A          227 VAEVVAFL--ASDRSSFITGACLTVDGGLL  254 (269)
T ss_dssp             HHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHH--hCCccCCCcCcEEEECCCcc
Confidence            99999999  89999999999999999973

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=1.8e-42  Score=293.17  Aligned_cols=220  Identities=27%  Similarity=0.322  Sum_probs=187.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc--hHHHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN--LGQALADKL--GHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~--~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+  ..+++.+.+  ...++.++.+|++|+++++++++++.+
T Consensus        45 ~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  124 (294)
T 3r3s_A           45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKARE  124 (294)
T ss_dssp             STTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999988733  333333332  135788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+|++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    ...+.++.
T Consensus       125 ~~g~iD~lv~nAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~g~Iv~isS~~----~~~~~~~~  196 (294)
T 3r3s_A          125 ALGGLDILALVAGKQTA--IPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK--GASIITTSSIQ----AYQPSPHL  196 (294)
T ss_dssp             HHTCCCEEEECCCCCCC--CSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT--TCEEEEECCGG----GTSCCTTC
T ss_pred             HcCCCCEEEECCCCcCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc--CCEEEEECChh----hccCCCCc
Confidence            99999999999876432  245678899999999999999999999999999953  58999999543    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------------------h--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------------------A--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------------------~--~~~~~~~~~~l  233 (255)
                         ..|++||+++++|++.++.|++++|||||+|+| +.++|+.                      +  |+|++++++||
T Consensus       197 ---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L  272 (294)
T 3r3s_A          197 ---LDYAATKAAILNYSRGLAKQVAEKGIRVNIVAP-GPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYL  272 (294)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               679999999999999999999999999999999 7777641                      1  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.++||++|.||||+.
T Consensus       273 --~s~~~~~itG~~i~vdGG~~  292 (294)
T 3r3s_A          273 --ASQESSYVTAEVHGVCGGEH  292 (294)
T ss_dssp             --HSGGGTTCCSCEEEESTTCC
T ss_pred             --hCccccCCCCCEEEECCCcc
Confidence              99999999999999999974

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=1.2e-42  Score=290.97  Aligned_cols=225  Identities=26%  Similarity=0.355  Sum_probs=192.5

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++.+++++|+++||||++|||++++++|+++|++|++++|+. +..+++.+++.  ..++.++.+|++|++++++++++
T Consensus        21 ~~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~  100 (271)
T 4iin_A           21 QSNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQT  100 (271)
T ss_dssp             ---CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence            3445778999999999999999999999999999999999954 44444444432  24788999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +.+.++++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||    ..+..+.
T Consensus       101 ~~~~~g~id~li~nAg~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS----~~~~~~~  173 (271)
T 4iin_A          101 IVQSDGGLSYLVNNAGVVRD---KLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVAS----IIGERGN  173 (271)
T ss_dssp             HHHHHSSCCEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----HHHHHCC
T ss_pred             HHHhcCCCCEEEECCCcCCC---cccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEec----hhhcCCC
Confidence            99999999999999886642   4556789999999999999999999999999998888899999994    3333333


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALY  232 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~  232 (255)
                      ++.   ..|++||++++++++.++.|++++||+||+|+| |.++|+                    ++  |+|+++++.+
T Consensus       174 ~~~---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~  249 (271)
T 4iin_A          174 MGQ---TNYSASKGGMIAMSKSFAYEGALRNIRFNSVTP-GFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEAVAF  249 (271)
T ss_dssp             TTC---HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBCCC------------CGGGCTTCSCBCHHHHHHHHHH
T ss_pred             CCc---hHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEe-CcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHHHHH
Confidence            333   779999999999999999999999999999999 877775                    11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  +++.+.++||+++.+|||+.
T Consensus       250 l--~s~~~~~itG~~i~vdGG~~  270 (271)
T 4iin_A          250 L--LSDHSSYITGETLKVNGGLY  270 (271)
T ss_dssp             H--HSGGGTTCCSCEEEESTTSC
T ss_pred             H--hCCCcCCCcCCEEEeCCCee
Confidence            9  88999999999999999984

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=2.4e-42  Score=286.54  Aligned_cols=223  Identities=23%  Similarity=0.313  Sum_probs=189.0

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .....++|+++||||++|||++++++|+++|++|++++ |+.+...+..+++.  ..++.++.+|++|.++++++++++.
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence            33568999999999999999999999999999999988 55555555444432  2478899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..    ...+.++
T Consensus        87 ~~~g~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~  159 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRD---VVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVN----GQKGQFG  159 (256)
T ss_dssp             HHTCCEEEEEECCCCCCC---CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCC----GGGSCSC
T ss_pred             HhcCCCCEEEECCCCCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchh----hccCCCC
Confidence            999999999999886542   456788999999999999999999999999999888889999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNM  234 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~  234 (255)
                      .   ..|++||+|++++++.++.|++++||+||+|+| +.++|+                    ++  |+|+++++.|+ 
T Consensus       160 ~---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  234 (256)
T 3ezl_A          160 Q---TNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSP-GYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWL-  234 (256)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHHHHHH-
T ss_pred             C---cccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEE-CcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence            3   779999999999999999999999999999999 888775                    11  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++++.++||+++.+|||+.
T Consensus       235 -~s~~~~~~tG~~i~vdgG~~  254 (256)
T 3ezl_A          235 -ASEESGFSTGADFSLNGGLH  254 (256)
T ss_dssp             -HSGGGTTCCSCEEEESTTSC
T ss_pred             -hCCcccCCcCcEEEECCCEe
Confidence             88999999999999999984

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=4.1e-42  Score=287.97  Aligned_cols=222  Identities=23%  Similarity=0.295  Sum_probs=191.4

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999877766655542  246889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 F-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~-g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      + |++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+    ..+.++.
T Consensus        96 ~~g~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~----~~~~~~~  168 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVI---HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG----FSALPSV  168 (273)
T ss_dssp             TTSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG----TSCCTTC
T ss_pred             cCCCCcEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhh----cCCCCCc
Confidence            9 99999999988653   24667789999999999999999999999999998777899999995433    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANA  229 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~  229 (255)
                         ..|++||++++++++.++.|++++|||||+|+| +.++|+                          ++  |+|++.+
T Consensus       169 ---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  244 (273)
T 1ae1_A          169 ---SLYSASKGAINQMTKSLACEWAKDNIRVNSVAP-GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSAL  244 (273)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-CCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence               679999999999999999999999999999999 655443                          11  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++  +++.+.++||+++.+|||++
T Consensus       245 v~~l--~s~~~~~~tG~~i~vdGG~~  268 (273)
T 1ae1_A          245 IAFL--CFPAASYITGQIIWADGGFT  268 (273)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHH--hCccccCcCCCEEEECCCcc
Confidence            9999  88999999999999999973

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=6.3e-42  Score=285.91  Aligned_cols=222  Identities=27%  Similarity=0.395  Sum_probs=190.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    ..++.++.+|++|+++++++++++.+
T Consensus         9 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   88 (267)
T 1iy8_A            9 TRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTE   88 (267)
T ss_dssp             -CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            45899999999999999999999999999999999999877666655442    35788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+|++|+||||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++.
T Consensus        89 ~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~  162 (267)
T 1iy8_A           89 RFGRIDGFFNNAGIEGK--QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGG----IRGIGNQ  162 (267)
T ss_dssp             HHSCCSEEEECCCCCCC--CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG----TSBCSSB
T ss_pred             HcCCCCEEEECCCcCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhh----ccCCCCC
Confidence            99999999999886532  13566789999999999999999999999999998777899999995432    2233323


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------Hh--HHhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------EA--IASIA  227 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~~--~~~~~  227 (255)
                         ..|++||++++++++.++.|++++||+||+|+| +.++|+                            ++  |+|++
T Consensus       163 ---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA  238 (267)
T 1iy8_A          163 ---SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP-GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIA  238 (267)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHH
T ss_pred             ---ccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEe-CCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHH
Confidence               679999999999999999999999999999999 554332                            11  89999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .+++++  +++.+.+++|+++.+|||+.
T Consensus       239 ~~v~~l--~s~~~~~~tG~~i~vdGG~~  264 (267)
T 1iy8_A          239 AVVAFL--LSDDASYVNATVVPIDGGQS  264 (267)
T ss_dssp             HHHHHH--TSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHH--cCccccCCCCCEEEECCCcc
Confidence            999999  88889999999999999974

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9.8e-43  Score=293.73  Aligned_cols=220  Identities=18%  Similarity=0.228  Sum_probs=193.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC---EEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA---KVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++++|+++||||++|||++++++|+++|+   +|++++|+.+.++++.+++.    ..++.++.+|++|+++++++++++
T Consensus        30 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  109 (287)
T 3rku_A           30 RLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENL  109 (287)
T ss_dssp             HHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTS
T ss_pred             hcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence            47899999999999999999999999998   99999999888777766552    357889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|+||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    +..+.+
T Consensus       110 ~~~~g~iD~lVnnAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~----~~~~~~  183 (287)
T 3rku_A          110 PQEFKDIDILVNNAGKALG--SDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIA----GRDAYP  183 (287)
T ss_dssp             CGGGCSCCEEEECCCCCCC--CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG----GTSCCT
T ss_pred             HHhcCCCCEEEECCCcCCC--CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChh----hcCCCC
Confidence            9999999999999886531  2467788999999999999999999999999999888889999999543    333333


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH---------------------h-HHhhhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE---------------------A-IASIANAALYN  233 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~---------------------~-~~~~~~~~~~l  233 (255)
                      +.   ..|++||+|+++|++.++.|++++|||||+|+| |.++|+.                     + |+|++++++|+
T Consensus       184 ~~---~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA~~v~~l  259 (287)
T 3rku_A          184 TG---SIYCASKFAVGAFTDSLRKELINTKIRVILIAP-GLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVADLIVYA  259 (287)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEE-SCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHHHHHHHH
T ss_pred             CC---chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeC-CcCcCccccccccCcHHHHHHhhcccCCCCHHHHHHHHHHH
Confidence            33   679999999999999999999999999999999 7777651                     1 79999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...+++|+++.+|||.
T Consensus       260 --~s~~~~~i~g~~i~v~~g~  278 (287)
T 3rku_A          260 --TSRKQNTVIADTLIFPTNQ  278 (287)
T ss_dssp             --HTSCTTEEEEEEEEEETTE
T ss_pred             --hCCCCCeEecceEEeeCCC
Confidence              9999999999999999985

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=4.1e-42  Score=290.83  Aligned_cols=219  Identities=26%  Similarity=0.322  Sum_probs=185.9

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHH---HHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQA---LADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++++|+++||||+  +|||++++++|+++|++|++++|++...+.   +.++.  .++.++.+|++|+++++++++++.+
T Consensus        28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (293)
T 3grk_A           28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--GAFVAGHCDVADAASIDAVFETLEK  105 (293)
T ss_dssp             TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--TCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--CCceEEECCCCCHHHHHHHHHHHHH
Confidence            4789999999999  559999999999999999999998643333   33333  3688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .+|++|+||||||..... ...++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    ...+.+.
T Consensus       106 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~g~Iv~isS~~----~~~~~~~  179 (293)
T 3grk_A          106 KWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD--GGSILTLTYYG----AEKVMPN  179 (293)
T ss_dssp             HTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT--CEEEEEEECGG----GTSBCTT
T ss_pred             hcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC--CCEEEEEeehh----hccCCCc
Confidence            999999999998865411 0246678899999999999999999999999999964  68999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+++|++.++.|++++|||||+|+| +.++|+                      ++  |+|++.+++|
T Consensus       180 ~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  255 (293)
T 3grk_A          180 Y---NVMGVAKAALEASVKYLAVDLGPQNIRVNAISA-GPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLY  255 (293)
T ss_dssp             T---THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             h---HHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEec-CCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 877774                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       256 L--~s~~~~~itG~~i~vdGG~~  276 (293)
T 3grk_A          256 F--LSDLSRSVTGEVHHADSGYH  276 (293)
T ss_dssp             H--HSGGGTTCCSCEEEESTTGG
T ss_pred             H--cCccccCCcceEEEECCCcc
Confidence            9  89999999999999999984

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5e-42  Score=285.43  Aligned_cols=220  Identities=25%  Similarity=0.332  Sum_probs=190.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999887766655542  2468889999999999999999999999


Q ss_pred             -CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 -GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 -g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       +++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+    ..+.++  
T Consensus        85 ~g~id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~--  155 (260)
T 2ae2_A           85 HGKLNILVNNAGIVI---YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSG----ALAVPY--  155 (260)
T ss_dssp             TTCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGG----TSCCTT--
T ss_pred             CCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh----ccCCCC--
Confidence             89999999988653   24566789999999999999999999999999998777899999995432    222222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------H-------------h--HHhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------E-------------A--IASIANAAL  231 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~-------------~--~~~~~~~~~  231 (255)
                       ...|++||++++++++.++.|++++||+||+|+| +.++|+            +             +  |+|+++++.
T Consensus       156 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~  233 (260)
T 2ae2_A          156 -EAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA  233 (260)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             -cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence             2679999999999999999999999999999999 665543            1             1  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +++.+.+++|+++.+|||+
T Consensus       234 ~l--~s~~~~~~tG~~~~vdgG~  254 (260)
T 2ae2_A          234 FL--CFPAASYVTGQIIYVDGGL  254 (260)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTG
T ss_pred             HH--cCccccCCCCCEEEECCCc
Confidence            99  8888899999999999996

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.3e-42  Score=290.43  Aligned_cols=220  Identities=23%  Similarity=0.307  Sum_probs=188.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC---CCceEEEEeeCCCHH------------
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG---HQDVCYIHCDVSNER------------   86 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~------------   86 (255)
                      ++++|+++||||++|||++++++|+++|++|++++ |+.+..+++.+++.   ..++.++++|+++++            
T Consensus         6 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (291)
T 1e7w_A            6 APTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAP   85 (291)
T ss_dssp             --CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCC
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccc
Confidence            57899999999999999999999999999999999 99877777666553   357889999999999            


Q ss_pred             -----HHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCC--------------hHHHHHHHhhhhhhHHHHHHHHH
Q 025252           87 -----EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTP--------------KSDLERLLAVNTIGGFLVAKHAA  147 (255)
Q Consensus        87 -----~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~  147 (255)
                           +++++++++.+.+|++|+||||||....   .++.+.+              .++|++++++|+.+++++++.++
T Consensus        86 ~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           86 VTLFTRCAELVAACYTHWGRCDVLVNNASSFYP---TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             BCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC---CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhcCCCCEEEECCCCCCC---CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                 9999999999999999999999886542   4556667              89999999999999999999999


Q ss_pred             HHhcCCC------CCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-
Q 025252          148 RVMVPRR------RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-  220 (255)
Q Consensus       148 ~~l~~~~------~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-  220 (255)
                      |.|++++      .++||++||..+    ..+.++.   ..|++||++++++++.++.|++++|||||+|+| |.++|+ 
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~----~~~~~~~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~  234 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMT----NQPLLGY---TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVD  234 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTT----TSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCCGG
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhh----cCCCCCC---chhHHHHHHHHHHHHHHHHHHHhcCeEEEEEee-CCccCCc
Confidence            9998776      699999996543    2233333   679999999999999999999999999999999 666543 


Q ss_pred             ------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                        ++  |+|++.+++||  +++.+.++||+++.+|||++
T Consensus       235 ~~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l--~s~~~~~itG~~i~vdGG~~  287 (291)
T 1e7w_A          235 DMPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL--CSSKAKYITGTCVKVDGGYS  287 (291)
T ss_dssp             GSCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             cCCHHHHHHHHhhCCCCCCCCCHHHHHHHHHHH--hCCcccCccCcEEEECCCcc
Confidence                              22  89999999999  88999999999999999974

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=5.2e-42  Score=283.86  Aligned_cols=219  Identities=23%  Similarity=0.337  Sum_probs=186.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----C-CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----H-QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    . .++.++.+|++|.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            46789999999999999999999999999999999999887777666542    2 578899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|++|||||....   .++ +.+.++|++++++|+.++++++++++|.|++++.|+||++||..+    ..+..+
T Consensus        83 ~~~g~iD~lvnnAg~~~~---~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~  154 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMD---GSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAA----KYGFAD  154 (250)
T ss_dssp             HHHCCEEEEEECCCCCCC---CCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-----------CC
T ss_pred             HhcCCCCEEEECCCcCCC---CCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHh----cCCCCC
Confidence            999999999999887542   334 678899999999999999999999999998888899999995543    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccC-CCCC
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKD-DDTS  241 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~-~~~~  241 (255)
                         ...|++||++++++++.++.|++++|||||+|+| |.++|+            ++  |+|++..+.++  ++ +...
T Consensus       155 ---~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l--~s~~~~~  228 (250)
T 3nyw_A          155 ---GGIYGSTKFALLGLAESLYRELAPLGIRVTTLCP-GWVNTDMAKKAGTPFKDEEMIQPDDLLNTIRCL--LNLSENV  228 (250)
T ss_dssp             ---TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCSHHHHHTTCCSCGGGSBCHHHHHHHHHHH--HTSCTTE
T ss_pred             ---CcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CcccCchhhhcCCCcccccCCCHHHHHHHHHHH--HcCCCce
Confidence               3679999999999999999999999999999999 888776            12  99999999999  66 5677


Q ss_pred             eeeceeEEecCCc
Q 025252          242 YVGKQNLLVNGGF  254 (255)
Q Consensus       242 ~~~G~~i~~dgG~  254 (255)
                      +++|.+|.+|||-
T Consensus       229 ~~~~~~i~vd~~~  241 (250)
T 3nyw_A          229 CIKDIVFEMKKSI  241 (250)
T ss_dssp             ECCEEEEEEHHHH
T ss_pred             EeeEEEEEeeccc
Confidence            8899999999983

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=2.7e-42  Score=288.08  Aligned_cols=212  Identities=24%  Similarity=0.325  Sum_probs=184.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+...         ....+.+|+++.++++++++++.+.+|+
T Consensus        24 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~---------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   94 (266)
T 3uxy_A           24 QGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA---------ADLHLPGDLREAAYADGLPGAVAAGLGR   94 (266)
T ss_dssp             --CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC---------CSEECCCCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---------hhhccCcCCCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999999866432         2244589999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|+||||||....   .++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+    ..+.++.   .
T Consensus        95 iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~----~~~~~~~---~  164 (266)
T 3uxy_A           95 LDIVVNNAGVISR---GRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWG----LRPGPGH---A  164 (266)
T ss_dssp             CCEEEECCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT----TBCCTTB---H
T ss_pred             CCEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHh----CCCCCCC---h
Confidence            9999999886642   5667889999999999999999999999999998888899999995543    3333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAALY  232 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~~~  232 (255)
                      .|++||+|++++++.++.|++++||+||+|+| +.++|+                           ++  |+|++++++|
T Consensus       165 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  243 (266)
T 3uxy_A          165 LYCLTKAALASLTQCMGMDHAPQGIRINAVCP-NEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLF  243 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCcEEEEEee-CCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            79999999999999999999999999999999 777665                           11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       244 L--~s~~~~~itG~~i~vdGG~~  264 (266)
T 3uxy_A          244 L--ASDAARYLCGSLVEVNGGKA  264 (266)
T ss_dssp             H--HSGGGTTCCSCEEEESTTCC
T ss_pred             H--hCchhcCCcCCEEEECcCEe
Confidence            9  89999999999999999974

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.3e-42  Score=286.29  Aligned_cols=223  Identities=24%  Similarity=0.292  Sum_probs=192.0

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +.+++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. +++.++.+|++|+++++++++++.+.
T Consensus        23 ~~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           23 PYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999999999999998877777776643 36888899999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC----CcEEEeccCCCcccccccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR----GCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~----~~ii~is~~~~~~~~~~~~  174 (255)
                      +|++|++|||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.    ++||++||..+    ..+.
T Consensus       103 ~g~iD~lvnnAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~----~~~~  175 (276)
T 2b4q_A          103 SARLDILVNNAGTSWG---AALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG----ISAM  175 (276)
T ss_dssp             CSCCSEEEECCCCCCC---CCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG----TCCC
T ss_pred             cCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH----cCCC
Confidence            9999999999876542   45677889999999999999999999999999976655    89999995533    2222


Q ss_pred             cCCCCCc-ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------H--------h--HHhhhhh
Q 025252          175 LCNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------E--------A--IASIANA  229 (255)
Q Consensus       175 ~~~~~~~-~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------~--------~--~~~~~~~  229 (255)
                      +..   . .|++||++++.+++.++.|++++|||||+|+| +.++|+              .        +  |+|++.+
T Consensus       176 ~~~---~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  251 (276)
T 2b4q_A          176 GEQ---AYAYGPSKAALHQLSRMLAKELVGEHINVNVIAP-GRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAAL  251 (276)
T ss_dssp             CCS---CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHHHHHHH
T ss_pred             CCC---ccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-ccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHHHHHHH
Confidence            222   4 69999999999999999999999999999999 665543              1        1  7999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++  +++.+.++||+++.+|||+.
T Consensus       252 v~~l--~s~~~~~~tG~~i~vdGG~~  275 (276)
T 2b4q_A          252 AISL--AGTAGAYMTGNVIPIDGGFH  275 (276)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTTT
T ss_pred             HHHH--hCccccCCCCCEEEeCCCcc
Confidence            9999  88889999999999999974

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.5e-42  Score=288.11  Aligned_cols=220  Identities=22%  Similarity=0.338  Sum_probs=177.8

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |..+++++|+++||||++|||++++++|+++|++|++++|+.+.   ..+++. .++.++++|++|+++++++++.+.+ 
T Consensus         2 p~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~---~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            2 PGSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED---VVADLG-DRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             --------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH---HHHHTC-TTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CCcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH---HHHhcC-CceEEEECCCCCHHHHHHHHHHHHH-
Confidence            34578999999999999999999999999999999999996543   233333 5789999999999999999998877 


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC--------CCCCcEEEeccCCCccc
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP--------RRRGCILYTTGTGTTAC  169 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--------~~~~~ii~is~~~~~~~  169 (255)
                      +|++|++|||||...... ..+..+.+.++|++++++|+.++++++++++|.|++        ++.|+||++||..+.  
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~--  154 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAF--  154 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC----
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhc--
Confidence            899999999987654211 112335789999999999999999999999999987        567899999965432  


Q ss_pred             ccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhh
Q 025252          170 TEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASI  226 (255)
Q Consensus       170 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~  226 (255)
                        .+.++.   ..|++||++++++++.++.|++++|||||+|+| |.++|+                     ++  |+|+
T Consensus       155 --~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~p~dv  228 (257)
T 3tl3_A          155 --DGQIGQ---AAYSASKGGVVGMTLPIARDLASHRIRVMTIAP-GLFDTPLLASLPEEARASLGKQVPHPSRLGNPDEY  228 (257)
T ss_dssp             --CCHHHH---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTC---CHHHHHHHHHTSSSSCSCBCHHHH
T ss_pred             --CCCCCC---ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe-cCccChhhhhccHHHHHHHHhcCCCCCCccCHHHH
Confidence              222222   579999999999999999999999999999999 877775                     12  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++++|  +++  .++||++|.+|||++
T Consensus       229 a~~v~~l--~s~--~~itG~~i~vdGG~~  253 (257)
T 3tl3_A          229 GALAVHI--IEN--PMLNGEVIRLDGAIR  253 (257)
T ss_dssp             HHHHHHH--HHC--TTCCSCEEEESTTC-
T ss_pred             HHHHHHH--hcC--CCCCCCEEEECCCcc
Confidence            9999999  665  799999999999984

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=9.1e-42  Score=284.29  Aligned_cols=225  Identities=20%  Similarity=0.318  Sum_probs=187.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++.+|+++||||++|||++++++|+++|++|++++|+.+. .+.+.+....  .++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999777654 3333333322  47899999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++|||||.... ...++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||.+...  ..+   ..
T Consensus        83 ~g~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~--~~~---~~  156 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVF-ERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADS--APG---WI  156 (264)
T ss_dssp             HSCCCEEECCCCCCCC-SCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGG--CCC---CT
T ss_pred             hCCCCEEEECCccccc-CCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcc--cCC---CC
Confidence            9999999999873221 12566778999999999999999999999999999888889999999653221  111   12


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~  236 (255)
                      +...|++||++++++++.++.|++++||+||+|+| +.++|+                 +   +  |+|+++++.++  +
T Consensus       157 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l--~  233 (264)
T 3i4f_A          157 YRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCP-GDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIARTISFL--C  233 (264)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCGGGGSCCHHHHHHC--------CCCCHHHHHHHHHHH--H
T ss_pred             CCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEcc-CCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHHHH--c
Confidence            23679999999999999999999999999999999 877776                 1   1  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...++||++|.+|||++
T Consensus       234 s~~~~~itG~~i~vdGG~~  252 (264)
T 3i4f_A          234 EDDSDMITGTIIEVTGAVD  252 (264)
T ss_dssp             SGGGTTCCSCEEEESCSCC
T ss_pred             CcccCCCCCcEEEEcCcee
Confidence            8999999999999999985

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.7e-42  Score=286.09  Aligned_cols=219  Identities=26%  Similarity=0.361  Sum_probs=189.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +.+|+++||||++|||++++++|+++|++|+++++ +.+..++..++..  ..++.++.+|++|+++++++++++.+.+|
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            68999999999999999999999999999999984 4444444444332  25789999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||    .....+.++.   
T Consensus       103 ~id~li~nAg~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS----~~~~~~~~~~---  172 (269)
T 3gk3_A          103 KVDVLINNAGITRD---ATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGS----VNGSRGAFGQ---  172 (269)
T ss_dssp             CCSEEEECCCCCCC---BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----HHHHHCCTTB---
T ss_pred             CCCEEEECCCcCCC---cchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCC----hhhccCCCCc---
Confidence            99999999886642   4667889999999999999999999999999998888899999994    3333333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      ..|++||+|++++++.++.|++++||+||+|+| |.++|+                     ++  |+|++.++++|  ++
T Consensus       173 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L--~s  249 (269)
T 3gk3_A          173 ANYASAKAGIHGFTKTLALETAKRGITVNTVSP-GYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAALIAFL--CS  249 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHHHHHHH--TS
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEec-CcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHHHHHHH--hC
Confidence            679999999999999999999999999999999 877775                     11  89999999999  89


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.+.++||++|.+|||+.
T Consensus       250 ~~~~~itG~~i~vdgG~~  267 (269)
T 3gk3_A          250 DDAGFVTGADLAINGGMH  267 (269)
T ss_dssp             TTCTTCCSCEEEESTTSC
T ss_pred             CCcCCeeCcEEEECCCEe
Confidence            999999999999999984

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.5e-41  Score=280.81  Aligned_cols=219  Identities=30%  Similarity=0.448  Sum_probs=186.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|++ +..++..++.. .++.++++|++|+++++++++++.+.+|+
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (249)
T 2ew8_A            4 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-RRVLTVKCDVSQPGDVEAFGKQVISTFGR   82 (249)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTT-CCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcC-CcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999998 65554333332 47889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..    ...+.++.   .
T Consensus        83 id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---~  152 (249)
T 2ew8_A           83 CDILVNNAGIYP---LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTT----YWLKIEAY---T  152 (249)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GGSCCSSC---H
T ss_pred             CCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchh----hccCCCCc---h
Confidence            999999988654   2456778999999999999999999999999999877789999999543    33333322   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------H--------------h--HHhhhhhhhhhhccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------E--------------A--IASIANAALYNMAKD  237 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------~--------------~--~~~~~~~~~~l~~~~  237 (255)
                      .|++||++++.+++.++.|++++|||||+|+| +.++|+        +              +  |+|++.+++++  ++
T Consensus       153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l--~s  229 (249)
T 2ew8_A          153 HYISTKAANIGFTRALASDLGKDGITVNAIAP-SLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFL--AS  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCC------------------CTTSSSCSCCCTHHHHHHHHHH--TS
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEec-CcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHHHHHHH--cC
Confidence            79999999999999999999999999999999 655442        0              1  78999999999  88


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.+.++||+++.+|||++
T Consensus       230 ~~~~~~tG~~~~vdGG~~  247 (249)
T 2ew8_A          230 DDASFITGQTLAVDGGMV  247 (249)
T ss_dssp             GGGTTCCSCEEEESSSCC
T ss_pred             cccCCCCCcEEEECCCcc
Confidence            889999999999999974

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.2e-41  Score=282.26  Aligned_cols=219  Identities=33%  Similarity=0.423  Sum_probs=191.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .++.++.+|++|+++++++++++.+.+|++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999999887777766653 468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++   ...
T Consensus        81 D~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~---~~~  150 (254)
T 1hdc_A           81 DGLVNNAGIST---GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG----LMGLAL---TSS  150 (254)
T ss_dssp             CEEEECCCCCC---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTT---CHH
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh----ccCCCC---chh
Confidence            99999987654   24566789999999999999999999999999998777899999995432    222222   267


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H------hHHhhhhhhhhhhccCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E------AIASIANAALYNMAKDDD  239 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~------~~~~~~~~~~~l~~~~~~  239 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+                 +      -|+|++..++++  +++.
T Consensus       151 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l--~s~~  227 (254)
T 1hdc_A          151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHP-GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL--LSDT  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH--HSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-ccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHH--hCch
Confidence            9999999999999999999999999999999 766554                 1      289999999999  8888


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.+++|+++.+|||+.
T Consensus       228 ~~~~tG~~~~vdgG~~  243 (254)
T 1hdc_A          228 SSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hcCCCCCEEEECCCcc
Confidence            8999999999999974

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=1.1e-41  Score=283.35  Aligned_cols=222  Identities=27%  Similarity=0.381  Sum_probs=190.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999877666655542  2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+    ..+.++.  
T Consensus        90 g~iD~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~--  161 (260)
T 2zat_A           90 GGVDILVSNAAVNPF--FGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGA----YHPFPNL--  161 (260)
T ss_dssp             SCCCEEEECCCCCCC--CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG----TSCCTTB--
T ss_pred             CCCCEEEECCCCCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhh----cCCCCCc--
Confidence            999999999876431  24566789999999999999999999999999998777899999995433    2222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                       ..|++||++++++++.++.|++++|||||+|+| +.++|+                      ++  |+|++.++.++  
T Consensus       162 -~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l--  237 (260)
T 2zat_A          162 -GPYNVSKTALLGLTKNLAVELAPRNIRVNCLAP-GLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFL--  237 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHH--
T ss_pred             -hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEE-CcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--
Confidence             679999999999999999999999999999999 665543                      11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.+++|+++.+|||+.
T Consensus       238 ~s~~~~~~tG~~~~vdgG~~  257 (260)
T 2zat_A          238 CSEDASYITGETVVVGGGTA  257 (260)
T ss_dssp             TSGGGTTCCSCEEEESTTCC
T ss_pred             cCcccCCccCCEEEECCCcc
Confidence            88889999999999999974

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=7.7e-42  Score=285.18  Aligned_cols=226  Identities=25%  Similarity=0.392  Sum_probs=191.6

Q ss_pred             ccceeeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchH-HHHHHHhC---CCceEEEEeeCCCHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLG---HQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~-~~~~~~~~---~~~~~~~~~D~~~~~~~~~~   91 (255)
                      .+..+++++|+++||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.   ..++.++++|++|+++++++
T Consensus        12 ~~~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~   91 (267)
T 3gdg_A           12 LLDQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKL   91 (267)
T ss_dssp             HHHHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHH
T ss_pred             cccccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHH
Confidence            344567899999999999  9999999999999999999998886543 33333331   35788999999999999999


Q ss_pred             HHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc
Q 025252           92 VDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE  171 (255)
Q Consensus        92 ~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~  171 (255)
                      ++++.+.++++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+.    
T Consensus        92 ~~~~~~~~g~id~li~nAg~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~----  164 (267)
T 3gdg_A           92 VKDVVADFGQIDAFIANAGATAD---SGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH----  164 (267)
T ss_dssp             HHHHHHHTSCCSEEEECCCCCCC---SCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT----
T ss_pred             HHHHHHHcCCCCEEEECCCcCCC---CCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc----
Confidence            99999999999999999876542   45678899999999999999999999999999988888999999954432    


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhh
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANA  229 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~  229 (255)
                      .+.. ..+...|++||++++++++.++.|+++. |+||+|+| |.++|+                    ++  |+|++.+
T Consensus       165 ~~~~-~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~~  241 (267)
T 3gdg_A          165 IANF-PQEQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISP-GYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKGA  241 (267)
T ss_dssp             SCCS-SSCCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEE-CCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHHH
T ss_pred             ccCC-CCCCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEEC-CccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHhH
Confidence            2211 0123679999999999999999999988 99999999 877775                    11  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +++.+.++||++|.+|||++
T Consensus       242 ~~~l--~s~~~~~itG~~i~vdgG~~  265 (267)
T 3gdg_A          242 YVYF--ASDASTYTTGADLLIDGGYT  265 (267)
T ss_dssp             HHHH--HSTTCTTCCSCEEEESTTGG
T ss_pred             hhee--ecCccccccCCEEEECCcee
Confidence            9999  89999999999999999984

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=3.4e-41  Score=280.79  Aligned_cols=221  Identities=24%  Similarity=0.322  Sum_probs=190.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.   ..++.++.+|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877766655542   246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+    ..+.++  
T Consensus        83 ~g~id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~--  153 (263)
T 3ai3_A           83 FGGADILVNNAGTGS---NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA----VQPLWY--  153 (263)
T ss_dssp             HSSCSEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTT--
T ss_pred             cCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh----cCCCCC--
Confidence            999999999987654   24667789999999999999999999999999998777899999995533    222222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------H---h--HH
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------E---A--IA  224 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~---~--~~  224 (255)
                       ...|++||++++++++.++.|++++||+||+|+| +.++|+                             +   +  |+
T Consensus       154 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  231 (263)
T 3ai3_A          154 -EPIYNVTKAALMMFSKTLATEVIKDNIRVNCINP-GLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPE  231 (263)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHH
T ss_pred             -cchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHH
Confidence             2679999999999999999999999999999999 655442                             1   1  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |++.+++++  +++.+.+++|+++.+|||+.
T Consensus       232 dvA~~~~~l--~s~~~~~~~G~~~~vdgG~~  260 (263)
T 3ai3_A          232 ELANFFVFL--CSERATYSVGSAYFVDGGML  260 (263)
T ss_dssp             HHHHHHHHH--TSTTCTTCCSCEEEESTTCC
T ss_pred             HHHHHHHHH--cCccccCCCCcEEEECCCcc
Confidence            999999999  88889999999999999974

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=1.7e-41  Score=286.30  Aligned_cols=225  Identities=24%  Similarity=0.380  Sum_probs=183.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC---CCceEEEEeeCCC----HHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG---HQDVCYIHCDVSN----EREVI   89 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~----~~~~~   89 (255)
                      .+...+|++|+++||||++|||++++++|+++|++|++++|+. +..+++.+++.   ..++.++.+|++|    +++++
T Consensus        15 ~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~   94 (288)
T 2x9g_A           15 VPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCE   94 (288)
T ss_dssp             -------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHH
Confidence            3444568999999999999999999999999999999999998 76666655542   3578899999999    99999


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCC-----CC-----CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-----
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSI-----LD-----TPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-----  154 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----  154 (255)
                      ++++++.+.+|++|+||||||....   .++     .+     .+.++|++++++|+.+++++++.++|.|++++     
T Consensus        95 ~~~~~~~~~~g~iD~lvnnAG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~  171 (288)
T 2x9g_A           95 EIINSCFRAFGRCDVLVNNASAFYP---TPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTS  171 (288)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCC---CCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------C
T ss_pred             HHHHHHHHhcCCCCEEEECCCCCCC---CccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCC
Confidence            9999999999999999999886542   233     45     78899999999999999999999999998766     


Q ss_pred             -CCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------
Q 025252          155 -RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------  220 (255)
Q Consensus       155 -~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------  220 (255)
                       .++||++||..+    ..+.++   ...|++||++++++++.++.|++++||+||+|+| +.++|+             
T Consensus       172 ~~g~iv~isS~~~----~~~~~~---~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~  243 (288)
T 2x9g_A          172 SNLSIVNLCDAMV----DQPCMA---FSLYNMGKHALVGLTQSAALELAPYGIRVNGVAP-GVSLLPVAMGEEEKDKWRR  243 (288)
T ss_dssp             CCEEEEEECCTTT----TSCCTT---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSCSCCTTSCHHHHHHHHH
T ss_pred             CCeEEEEEecccc----cCCCCC---CchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEe-ccccCccccChHHHHHHHh
Confidence             789999996543    222222   2679999999999999999999999999999999 655443             


Q ss_pred             -----H--h-HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -----E--A-IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -----~--~-~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                           +  . |+|++.+++++  +++.+.++||+++.+|||+.
T Consensus       244 ~~p~~r~~~~pedvA~~v~~l--~s~~~~~itG~~i~vdGG~~  284 (288)
T 2x9g_A          244 KVPLGRREASAEQIADAVIFL--VSGSAQYITGSIIKVDGGLS  284 (288)
T ss_dssp             TCTTTSSCCCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             hCCCCCCCCCHHHHHHHHHHH--hCccccCccCCEEEECcchh
Confidence                 1  2 89999999999  88999999999999999973

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.9e-41  Score=281.95  Aligned_cols=219  Identities=26%  Similarity=0.359  Sum_probs=188.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++. .+++.+++.   ..++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999876 666655542   2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+    ..+.++   
T Consensus        82 g~iD~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~---  151 (260)
T 1x1t_A           82 GRIDILVNNAGIQH---TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG----LVASAN---  151 (260)
T ss_dssp             SCCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTT---
T ss_pred             CCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHh----CcCCCC---
Confidence            99999999988654   24566789999999999999999999999999998777899999995432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IAS  225 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~  225 (255)
                      ...|++||++++.+++.++.|++++||+||+|+| +.++|+                                ++  |+|
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d  230 (260)
T 1x1t_A          152 KSAYVAAKHGVVGFTKVTALETAGQGITANAICP-GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ  230 (260)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhccCCEEEEEEee-cCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHH
Confidence            2679999999999999999999999999999999 655442                                11  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+++++  +++.+.++||+++.+|||++
T Consensus       231 va~~~~~l--~s~~~~~~tG~~~~vdgG~~  258 (260)
T 1x1t_A          231 LGGTAVFL--ASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHH--hChhhcCCCCCEEEECCCcc
Confidence            99999999  88889999999999999974

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.7e-41  Score=279.88  Aligned_cols=218  Identities=23%  Similarity=0.372  Sum_probs=187.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch--HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL--GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~--~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+.+.  .++..+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         1 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   80 (258)
T 3a28_C            1 MSKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLG   80 (258)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999999998876  666655553  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|+||||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++. ++||++||..    ...+.++.  
T Consensus        81 ~iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~--  151 (258)
T 3a28_C           81 GFDVLVNNAGIAQ---IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIA----AIQGFPIL--  151 (258)
T ss_dssp             CCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGG----GTSCCTTC--
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcch----hccCCCCc--
Confidence            9999999988654   245677899999999999999999999999999987666 8999999543    22233222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H---h--HHhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E---A--IASI  226 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~---~--~~~~  226 (255)
                       ..|++||++++++++.++.|++++||+||+|+| +.++|+                            +   +  |+|+
T Consensus       152 -~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dv  229 (258)
T 3a28_C          152 -SAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAP-GIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDV  229 (258)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHH
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEC-CccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHH
Confidence             679999999999999999999999999999999 554332                            1   1  8999


Q ss_pred             hhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++.++  +++.+.++||+++.+|||+.
T Consensus       230 A~~v~~l--~s~~~~~~tG~~i~vdGG~~  256 (258)
T 3a28_C          230 AGLVSFL--ASENSNYVTGQVMLVDGGML  256 (258)
T ss_dssp             HHHHHHH--HSGGGTTCCSCEEEESSSSC
T ss_pred             HHHHHHH--hCcccCCCCCCEEEECCCEe
Confidence            9999999  88999999999999999974

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-42  Score=288.57  Aligned_cols=223  Identities=22%  Similarity=0.275  Sum_probs=183.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC------------cchHHHHHHHh--CCCceEEEEeeCCCHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ------------DNLGQALADKL--GHQDVCYIHCDVSNEREV   88 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~------------~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+            .+..++...++  ...++.++.+|++|++++
T Consensus         7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   86 (287)
T 3pxx_A            7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV   86 (287)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred             ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence            5789999999999999999999999999999999987            33444443333  235789999999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc
Q 025252           89 INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA  168 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~  168 (255)
                      +++++++.+.+|++|+||||||.....     .+.+.++|++++++|+.++++++++++|+|  ++.++||++||..+..
T Consensus        87 ~~~~~~~~~~~g~id~lv~nAg~~~~~-----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~~~  159 (287)
T 3pxx_A           87 SRELANAVAEFGKLDVVVANAGICPLG-----AHLPVQAFADAFDVDFVGVINTVHAALPYL--TSGASIITTGSVAGLI  159 (287)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCCCCCC-----TTCCTHHHHHHHHHHTHHHHHHHHHHGGGC--CTTCEEEEECCHHHHH
T ss_pred             HHHHHHHHHHcCCCCEEEECCCcCccc-----CcCCHHHHHHHhhhhhhhhHHHHHHHHHHh--hcCcEEEEeccchhcc
Confidence            999999999999999999998866422     237889999999999999999999999999  4568999999653322


Q ss_pred             ccccc-C---cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------------
Q 025252          169 CTEIE-G---LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------------  221 (255)
Q Consensus       169 ~~~~~-~---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------------  221 (255)
                      ..... .   ....+...|++||++++++++.++.|++++|||||+|+| |.++|+.                       
T Consensus       160 ~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~  238 (287)
T 3pxx_A          160 AAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHP-TNVNTDMLNSAPMYRQFRPDLEAPSRADAL  238 (287)
T ss_dssp             HHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-SSBSSTTTSSHHHHHHHCTTSSSCCHHHHH
T ss_pred             cccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CccccccccccchhhhhccccccchhHHHH
Confidence            11000 0   000112569999999999999999999999999999999 7776641                       


Q ss_pred             ------------h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 ------------A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 ------------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                  +  |+|++.+++||  +++.+.++||++|.||||+.
T Consensus       239 ~~~~~~~~~~~~~~~p~dva~~v~fL--~s~~a~~itG~~i~vdGG~~  284 (287)
T 3pxx_A          239 LAFPAMQAMPTPYVEASDISNAVCFL--ASDESRYVTGLQFKVDAGAM  284 (287)
T ss_dssp             HHGGGGCSSSCSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             hhhhhhcccCCCCCCHHHHHhhHhee--cchhhcCCCCceEeECchhh
Confidence                        1  68999999999  99999999999999999974

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.6e-42  Score=284.44  Aligned_cols=214  Identities=26%  Similarity=0.408  Sum_probs=185.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+...       ..++.++.+|++|+++++++++++.+.+|+
T Consensus        24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   96 (260)
T 3un1_A           24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA-------DPDIHTVAGDISKPETADRIVREGIERFGR   96 (260)
T ss_dssp             HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS-------STTEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc-------cCceEEEEccCCCHHHHHHHHHHHHHHCCC
Confidence            4578999999999999999999999999999999999876432       236889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||.....  ..   ...+..
T Consensus        97 iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~--~~---~~~~~~  168 (260)
T 3un1_A           97 IDSLVNNAGVFL---AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQ--PM---VGMPSA  168 (260)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTS--CB---TTCCCH
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcc--CC---CCCccH
Confidence            999999988654   2466788999999999999999999999999999888889999999654321  11   122336


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh--HHhhhhhhhhhhccCCCCCe
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      .|++||++++++++.++.|++++|||||+|+| +.++|+                 ++  |+|+++++++|    +.+.+
T Consensus       169 ~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~t~~~~~~~~~~~~~~~p~~r~~~~~dva~av~~L----~~~~~  243 (260)
T 3un1_A          169 LASLTKGGLNAVTRSLAMEFSRSGVRVNAVSP-GVIKTPMHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL----EHAGF  243 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEE-CCBCCTTSCGGGHHHHHTTSTTSSCBCHHHHHHHHHHH----HHCTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhCcCCeEEEEEee-cCCCCCCCCHHHHHHHhccCCCCCCcCHHHHHHHHHHh----cccCC
Confidence            79999999999999999999999999999999 877775                 11  89999999988    45679


Q ss_pred             eeceeEEecCCcC
Q 025252          243 VGKQNLLVNGGFR  255 (255)
Q Consensus       243 ~~G~~i~~dgG~~  255 (255)
                      +||++|.+|||+.
T Consensus       244 itG~~i~vdGG~~  256 (260)
T 3un1_A          244 ITGEILHVDGGQN  256 (260)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             CCCcEEEECCCee
Confidence            9999999999973

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-41  Score=279.62  Aligned_cols=217  Identities=24%  Similarity=0.354  Sum_probs=187.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            6899999999999999999999999999999999877766665542  24688999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      ++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++ .++||++||..    ...+.+..   ..
T Consensus        82 ~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---~~  151 (256)
T 1geg_A           82 VIVNNAGVAP---STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQA----GHVGNPEL---AV  151 (256)
T ss_dssp             EEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGG----GTSCCTTB---HH
T ss_pred             EEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchh----hcCCCCCc---hh
Confidence            9999987653   24567789999999999999999999999999998766 68999999543    23333323   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+                               ++  |+|++.+
T Consensus       152 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  230 (256)
T 1geg_A          152 YSSSKFAVRGLTQTAARDLAPLGITVNGYCP-GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAAC  230 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCeEEEEEEE-CCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999 655432                               11  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++  +++.+.++||+++.+|||++
T Consensus       231 v~~l--~s~~~~~~tG~~i~vdGG~~  254 (256)
T 1geg_A          231 VSYL--ASPDSDYMTGQSLLIDGGMV  254 (256)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESSSSS
T ss_pred             HHHH--hCccccCCCCCEEEeCCCcc
Confidence            9999  88889999999999999974

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=6.1e-41  Score=279.29  Aligned_cols=220  Identities=28%  Similarity=0.438  Sum_probs=190.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. ++.++.+|++|+++++++++++.+++|+
T Consensus         8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~~g~   86 (263)
T 3ak4_A            8 FDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN-GGFAVEVDVTKRASVDAAMQKAIDALGG   86 (263)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTT-CCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            457899999999999999999999999999999999998877777666543 6788999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++ .++|+++||..    ...+.+.   .
T Consensus        87 iD~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~---~  156 (263)
T 3ak4_A           87 FDLLCANAGVST---MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLA----AKVGAPL---L  156 (263)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGG----GTSCCTT---C
T ss_pred             CCEEEECCCcCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccc----cccCCCC---c
Confidence            999999987654   24566789999999999999999999999999998766 79999999543    2222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H---h--HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E---A--IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~---~--~~~~~  227 (255)
                      ..|++||++++.+++.++.|++++||+||+|+| +.++|+                            +   +  |+|++
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA  235 (263)
T 3ak4_A          157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCP-GFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVA  235 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEec-ccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence            679999999999999999999999999999999 655432                            1   1  89999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .+++++  +++.+.+++|+++.+|||++
T Consensus       236 ~~v~~l--~s~~~~~~tG~~~~vdgG~~  261 (263)
T 3ak4_A          236 DVVVFL--ASDAARFMTGQGINVTGGVR  261 (263)
T ss_dssp             HHHHHH--HSGGGTTCCSCEEEESSSSS
T ss_pred             HHHHHH--hCccccCCCCCEEEECcCEe
Confidence            999999  88888999999999999974

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=3.2e-41  Score=281.36  Aligned_cols=222  Identities=23%  Similarity=0.308  Sum_probs=188.6

Q ss_pred             eeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++++|+++||||+  +|||++++++|+++|++|++++|++...+.+.   ++.+..++.++.+|++|+++++++++++.
T Consensus         3 ~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (266)
T 3oig_A            3 FSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIK   82 (266)
T ss_dssp             SCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHH
T ss_pred             cccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHH
Confidence            46889999999999  66999999999999999999999875444333   33333478999999999999999999999


Q ss_pred             HHcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +.++++|++||||+..... ...++.+.+.++|++++++|+.+++++++.++|.|+  +.|+||++||..    ...+.+
T Consensus        83 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~g~iv~isS~~----~~~~~~  156 (266)
T 3oig_A           83 EQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMT--EGGSIVTLTYLG----GELVMP  156 (266)
T ss_dssp             HHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCT--TCEEEEEEECGG----GTSCCT
T ss_pred             HHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcC--CCceEEEEeccc----ccccCC
Confidence            9999999999998765421 124567789999999999999999999999999995  368999999543    333333


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~  231 (255)
                      ..   ..|++||+|+++|++.++.|++++||+||+|+| +.++|+                      ++  |+|+++.++
T Consensus       157 ~~---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~  232 (266)
T 3oig_A          157 NY---NVMGVAKASLDASVKYLAADLGKENIRVNSISA-GPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAA  232 (266)
T ss_dssp             TT---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             Cc---chhHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            33   679999999999999999999999999999999 877774                      11  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++  +++.+.++||++|.+||||+
T Consensus       233 ~l--~s~~~~~~tG~~i~vdGG~~  254 (266)
T 3oig_A          233 FL--FSDMSRGITGENLHVDSGFH  254 (266)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--cCCchhcCcCCEEEECCCeE
Confidence            99  88999999999999999984

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2e-41  Score=282.15  Aligned_cols=219  Identities=28%  Similarity=0.454  Sum_probs=188.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   83 (262)
T 1zem_A            4 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   83 (262)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            4689999999999999999999999999999999999887777666553  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|+||||||...  ...++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||.    ....+.+..   
T Consensus        84 ~id~lv~nAg~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~----~~~~~~~~~---  154 (262)
T 1zem_A           84 KIDFLFNNAGYQG--AFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM----AGVKGPPNM---  154 (262)
T ss_dssp             CCCEEEECCCCCC--CCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH----HHHSCCTTB---
T ss_pred             CCCEEEECCCCCC--CCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcch----hhccCCCCC---
Confidence            9999999988652  1246677899999999999999999999999999987778999999943    333333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------------H---h--
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------------E---A--  222 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------------~---~--  222 (255)
                      ..|++||++++.+++.++.|++++|||||+|+| +.++|+                                 +   +  
T Consensus       155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  233 (262)
T 1zem_A          155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISP-GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD  233 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEec-CCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcC
Confidence            679999999999999999999999999999999 544321                                 1   1  


Q ss_pred             HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          223 IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      |+|++.+++||  +++.+.++||+++.+|||
T Consensus       234 p~dvA~~v~~l--~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          234 INEIPGVVAFL--LGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             GGGSHHHHHHH--HSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHHH--cCchhcCcCCcEEecCCC
Confidence            88999999999  889999999999999998

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.2e-41  Score=279.86  Aligned_cols=220  Identities=20%  Similarity=0.292  Sum_probs=189.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.    ..++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999877776665553    22788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+| +|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++.
T Consensus        83 ~~g-id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~  154 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPR---PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL----LRPWQDL  154 (260)
T ss_dssp             TTC-CSEEEECCCCCC---CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTTB
T ss_pred             hcC-CCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhh----cCCCCCC
Confidence            988 999999987653   24567789999999999999999999999999998777899999995433    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HH
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IA  224 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~  224 (255)
                         ..|++||++++++++.++.|++++||+||+|+| +.++|+                               ++  |+
T Consensus       155 ---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  230 (260)
T 2z1n_A          155 ---ALSNIMRLPVIGVVRTLALELAPHGVTVNAVLP-SLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPE  230 (260)
T ss_dssp             ---HHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEE-CHHHHCCCC-----------------------CCTTSSCCCHH
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEE-CCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHH
Confidence               679999999999999999999999999999999 655432                               11  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+++.++++  +++.+.++||+++.+|||++
T Consensus       231 dva~~v~~l--~s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          231 ELASVVAFL--ASEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             HHHHHHHHH--TSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHHHHHH--hCccccCCCCCEEEeCCCcc
Confidence            999999999  88889999999999999974

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.2e-41  Score=277.88  Aligned_cols=216  Identities=29%  Similarity=0.441  Sum_probs=187.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++. ++..+++.  + .++++|++|+++++++++++.+.+|++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~i   78 (256)
T 2d1y_A            3 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALGRV   78 (256)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999999877 66666654  4 788999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..    ...+.++.   ..
T Consensus        79 D~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~---~~  148 (256)
T 2d1y_A           79 DVLVNNAAIAA---PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQ----GLFAEQEN---AA  148 (256)
T ss_dssp             CEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGG----GTSBCTTB---HH
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcccc----ccCCCCCC---hh
Confidence            99999987654   2456778999999999999999999999999999888889999999543    22233323   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |++||++++.+++.++.|++++|||||+|+| +.++|+                       +   +  |+|++.+++++ 
T Consensus       149 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l-  226 (256)
T 2d1y_A          149 YNASKGGLVNLTRSLALDLAPLRIRVNAVAP-GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL-  226 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCeEEEEEee-CCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 655432                       1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.+++|+++.+|||+.
T Consensus       227 -~s~~~~~~~G~~~~v~gG~~  246 (256)
T 2d1y_A          227 -ASEKASFITGAILPVDGGMT  246 (256)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hCchhcCCCCCEEEECCCcc
Confidence             88888999999999999973

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-41  Score=282.00  Aligned_cols=216  Identities=30%  Similarity=0.471  Sum_probs=187.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++. .++.++.+|++|+++++++++++.+.+|++
T Consensus         3 ~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (263)
T 2a4k_A            3 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   81 (263)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            3678999999999999999999999999999999999888877777665 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|.| ++ .++||++||..+.     +.++.   ..
T Consensus        82 D~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~-~g~iv~isS~~~~-----~~~~~---~~  148 (263)
T 2a4k_A           82 HGVAHFAGVAH---SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE-GGSLVLTGSVAGL-----GAFGL---AH  148 (263)
T ss_dssp             CEEEEGGGGTT---TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT-TCEEEEECCCTTC-----CHHHH---HH
T ss_pred             cEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc-CCEEEEEecchhc-----CCCCc---HH
Confidence            99999987653   2456778999999999999999999999999999 54 7899999966543     11222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+                 +   +  |+|+++.++++  +++.+
T Consensus       149 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l--~s~~~  225 (263)
T 2a4k_A          149 YAAGKLGVVGLARTLALELARKGVRVNVLLP-GLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL--LSEES  225 (263)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE-CSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH--HSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhhCcEEEEEEe-CcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCccc
Confidence            9999999999999999999999999999999 766654                 1   1  89999999999  88889


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .++||+++.+|||+.
T Consensus       226 ~~~tG~~i~vdgG~~  240 (263)
T 2a4k_A          226 AYITGQALYVDGGRS  240 (263)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCCcCCEEEECCCcc
Confidence            999999999999974

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=4.9e-41  Score=279.56  Aligned_cols=219  Identities=34%  Similarity=0.518  Sum_probs=191.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++. .++.++.+|++|+++++++++++.+++|++
T Consensus         4 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   82 (260)
T 1nff_A            4 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   82 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999999887777766654 358889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++.   ..
T Consensus        83 D~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---~~  152 (260)
T 1nff_A           83 HVLVNNAGILN---IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG----LAGTVAC---HG  152 (260)
T ss_dssp             CEEEECCCCCC---CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTTB---HH
T ss_pred             CEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhh----cCCCCCc---hh
Confidence            99999987654   24567789999999999999999999999999998777899999995433    2222222   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------Hh--HHhhhhhhhhhhccCCCCCeeec
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------EA--IASIANAALYNMAKDDDTSYVGK  245 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~~--~~~~~~~~~~l~~~~~~~~~~~G  245 (255)
                      |++||++++++++.++.|++++||+||+|+| +.+.|+               ++  |+|+++++.++  +++.+.+++|
T Consensus       153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l--~s~~~~~~~G  229 (260)
T 1nff_A          153 YTATKFAVRGLTKSTALELGPSGIRVNSIHP-GLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYL--ASDESSYSTG  229 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCcEEEEEEe-CCCCCCccccchhhHHhCccCCCCCHHHHHHHHHHH--hCccccCCcC
Confidence            9999999999999999999999999999999 766554               12  89999999999  8888899999


Q ss_pred             eeEEecCCcC
Q 025252          246 QNLLVNGGFR  255 (255)
Q Consensus       246 ~~i~~dgG~~  255 (255)
                      +++.+|||+.
T Consensus       230 ~~~~v~gG~~  239 (260)
T 1nff_A          230 AEFVVDGGTV  239 (260)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCee
Confidence            9999999963

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.7e-41  Score=290.81  Aligned_cols=222  Identities=25%  Similarity=0.311  Sum_probs=188.4

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-------HHHHHHHhC--CCceEEEEeeCCCHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-------GQALADKLG--HQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~--~~~~~~~~~D~~~~~~~~~   90 (255)
                      ...++++|+++||||++|||++++++|+++|++|++++|+.+.       +.+..+++.  ..++.++.+|++|++++++
T Consensus        39 ~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~  118 (346)
T 3kvo_A           39 NTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISA  118 (346)
T ss_dssp             CCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHH
T ss_pred             cCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHH
Confidence            4456899999999999999999999999999999999998764       333333332  2578899999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT  170 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~  170 (255)
                      +++++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++.++||++||.......
T Consensus       119 ~~~~~~~~~g~iDilVnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~  195 (346)
T 3kvo_A          119 AVEKAIKKFGGIDILVNNASAIS---LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPV  195 (346)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCC
Confidence            99999999999999999987654   356778899999999999999999999999999998888999999965433211


Q ss_pred             cccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhcc
Q 025252          171 EIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       171 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~  236 (255)
                      .  .+   +...|++||++++++++.++.|++ +||+||+|+||..++|+            ++  |+|+++++++|  +
T Consensus       196 ~--~~---~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~~~~~~~~r~~~pedvA~~v~~L--~  267 (346)
T 3kvo_A          196 W--FK---QHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDMLGGPGIESQCRKVDIIADAAYSI--F  267 (346)
T ss_dssp             G--TS---SSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHHCC--CGGGCBCTHHHHHHHHHH--H
T ss_pred             C--CC---CchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhhccccccccCCCHHHHHHHHHHH--H
Confidence            0  12   226799999999999999999999 89999999994346665            12  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++ +.++||+++ +|||+
T Consensus       268 s~-~~~itG~~i-vdgg~  283 (346)
T 3kvo_A          268 QK-PKSFTGNFV-IDENI  283 (346)
T ss_dssp             TS-CTTCCSCEE-EHHHH
T ss_pred             hc-CCCCCceEE-ECCcE
Confidence            88 899999988 99985

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=6.8e-41  Score=277.58  Aligned_cols=218  Identities=28%  Similarity=0.406  Sum_probs=190.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++. .++.++++|++|+++++++++++.+.+|++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4689999999999999999999999999999999999888777777763 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++ ++||++||..+    ..+.++.   ..
T Consensus        82 d~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~----~~~~~~~---~~  150 (253)
T 1hxh_A           82 NVLVNNAGILL---PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSS----WLPIEQY---AG  150 (253)
T ss_dssp             CEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGG----TSCCTTB---HH
T ss_pred             CEEEECCCCCC---CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhh----cCCCCCC---cc
Confidence            99999988653   24667889999999999999999999999999998776 99999995432    2233222   67


Q ss_pred             cccchHHHHHHHHHHHHHhccc--CcEEeEeccCcchhhh----------------------H---h--HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRY--GIRVDCVSHTYGLAMA----------------------E---A--IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~--gi~v~~v~p~~~~~t~----------------------~---~--~~~~~~~~~~l  233 (255)
                      |++||++++++++.++.|++++  ||+||+|+| +.++|+                      +   +  |+|++.+++++
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  229 (253)
T 1hxh_A          151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHP-DGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE-SEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEe-CCccCchhhhccchhhhHHHHhhhhccCccCCCCCHHHHHHHHHHH
Confidence            9999999999999999999998  999999999 654432                      1   1  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.+++|+++.+|||+.
T Consensus       230 --~s~~~~~~tG~~~~vdgG~~  249 (253)
T 1hxh_A          230 --ASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             --HSGGGTTCCSCEEEESSSCT
T ss_pred             --cCccccCCCCcEEEECCCcc
Confidence              88889999999999999974

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=2.8e-41  Score=282.09  Aligned_cols=223  Identities=22%  Similarity=0.264  Sum_probs=185.0

Q ss_pred             cceeeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHH---HHHhCCCceEEEEeeCCCHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQAL---ADKLGHQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      +...++++|+++||||+  +|||++++++|+++|++|++++|+....+.+   .++.  .++.++.+|++|+++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~   84 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSELVFPCDVADDAQIDALFA   84 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--TCCCEEECCTTCHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--CCcEEEECCCCCHHHHHHHHH
Confidence            34456899999999998  9999999999999999999999985443333   3332  358899999999999999999


Q ss_pred             HHHHHcCCccEEEEcCCCccccCc-cCCCC-CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGF-VSILD-TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE  171 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~-~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~  171 (255)
                      ++.+++|++|++|||||....... .++.+ .+.++|++++++|+.+++++++.++|.|++  .++||++||..    ..
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~g~iv~isS~~----~~  158 (271)
T 3ek2_A           85 SLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD--DASLLTLSYLG----AE  158 (271)
T ss_dssp             HHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE--EEEEEEEECGG----GT
T ss_pred             HHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc--CceEEEEeccc----cc
Confidence            999999999999999886643111 33444 899999999999999999999999999963  68999999543    33


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhh
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIA  227 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~  227 (255)
                      .+.++.   ..|++||+|+++|++.++.|++++||+||+|+| +.++|+                      ++  |+|++
T Consensus       159 ~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva  234 (271)
T 3ek2_A          159 RAIPNY---NTMGLAKAALEASVRYLAVSLGAKGVRVNAISA-GPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVG  234 (271)
T ss_dssp             SBCTTT---THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHH
T ss_pred             cCCCCc---cchhHHHHHHHHHHHHHHHHHHhcCcEEEEEec-CcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHH
Confidence            333333   679999999999999999999999999999999 888775                      11  89999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++++  +++.+.++||++|.+|||+.
T Consensus       235 ~~i~~l--~s~~~~~~tG~~i~vdgG~~  260 (271)
T 3ek2_A          235 NAGAFL--LSDLASGVTAEVMHVDSGFN  260 (271)
T ss_dssp             HHHHHH--HSGGGTTCCSEEEEESTTGG
T ss_pred             HHHHHH--cCcccCCeeeeEEEECCCee
Confidence            999999  88999999999999999974

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.1e-41  Score=282.27  Aligned_cols=217  Identities=29%  Similarity=0.489  Sum_probs=186.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ++.++.+|++|+++++++++++.+.+|++
T Consensus         6 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   83 (270)
T 1yde_A            6 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL   83 (270)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCeEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999887777776654  47889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....  ..++.+.+.++|++++++|+.++++++++++|+|+++ .++||++||.    ....+.+..   ..
T Consensus        84 D~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~----~~~~~~~~~---~~  153 (270)
T 1yde_A           84 DCVVNNAGHHPP--PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSL----VGAIGQAQA---VP  153 (270)
T ss_dssp             CEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCH----HHHHCCTTC---HH
T ss_pred             CEEEECCCCCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCc----cccCCCCCC---cc
Confidence            999999876532  1456678999999999999999999999999999654 5899999943    333333323   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |++||++++++++.++.|++++|||||+|+| +.++|+                       +   +  |+|++..+.|| 
T Consensus       154 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L-  231 (270)
T 1yde_A          154 YVATKGAVTAMTKALALDESPYGVRVNCISP-GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL-  231 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH-
T ss_pred             cHHHHHHHHHHHHHHHHHhhhhCcEEEEEEe-CccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 655543                       1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++ +.++||++|.+|||++
T Consensus       232 -~s~-~~~itG~~i~vdGG~~  250 (270)
T 1yde_A          232 -ASE-ANFCTGIELLVTGGAE  250 (270)
T ss_dssp             -HHH-CTTCCSCEEEESTTTT
T ss_pred             -ccc-CCCcCCCEEEECCCee
Confidence             777 7899999999999974

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-41  Score=289.27  Aligned_cols=219  Identities=23%  Similarity=0.308  Sum_probs=188.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC---CCceEEEEeeCCCHH-------------
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG---HQDVCYIHCDVSNER-------------   86 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~-------------   86 (255)
                      +++|+++||||++|||++++++|+++|++|++++ |+++..+++.+++.   ..++.++.+|++|++             
T Consensus        44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~  123 (328)
T 2qhx_A           44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPV  123 (328)
T ss_dssp             -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccc
Confidence            7899999999999999999999999999999999 98877777666543   357889999999999             


Q ss_pred             ----HHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCC--------------hHHHHHHHhhhhhhHHHHHHHHHH
Q 025252           87 ----EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTP--------------KSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus        87 ----~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                          +++++++++.+.+|++|+||||||....   .++.+.+              .++|++++++|+.+++++++.++|
T Consensus       124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~---~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYP---TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC---CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC---CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                9999999999999999999999886542   3455666              899999999999999999999999


Q ss_pred             HhcCCC------CCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--
Q 025252          149 VMVPRR------RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--  220 (255)
Q Consensus       149 ~l~~~~------~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--  220 (255)
                      .|++++      .++||++||..+.    .+.++.   ..|++||++++.+++.|+.|++++||+||+|+| +.++|+  
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~----~~~~~~---~~Y~asKaal~~l~~~la~el~~~gIrvn~v~P-G~v~T~~~  272 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTN----QPLLGY---TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDD  272 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTT----SCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBSCCCC
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhc----cCCCCc---HHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEec-CcccCCcc
Confidence            998766      7899999965432    222222   679999999999999999999999999999999 666553  


Q ss_pred             -----------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -----------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -----------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                       ++  |+|++.+++++  +++.+.++||+++.+|||++
T Consensus       273 ~~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l--~s~~~~~itG~~i~vdGG~~  324 (328)
T 2qhx_A          273 MPPAVWEGHRSKVPLYQRDSSAAEVSDVVIFL--CSSKAKYITGTCVKVDGGYS  324 (328)
T ss_dssp             SCHHHHHHHHTTCTTTTSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             ccHHHHHHHHhhCCCCCCCCCHHHHHHHHHHH--hCccccCccCcEEEECCCcc
Confidence                             22  89999999999  88889999999999999973

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=4.1e-41  Score=280.96  Aligned_cols=220  Identities=20%  Similarity=0.295  Sum_probs=187.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++|+++||||++|||++++++|+++|++|++. .|+.+..++..+++.  ..++.++.+|++|+++++++++++.+.
T Consensus        22 ~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (267)
T 4iiu_A           22 SNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQ  101 (267)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999775 456555555555442  357899999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc-CCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++++|++|||||....   .++.+.+.++|++++++|+.+++++++.+++.|. +++.++||++||    ..+..+.++.
T Consensus       102 ~g~id~li~nAg~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS----~~~~~~~~~~  174 (267)
T 4iiu_A          102 HGAWYGVVSNAGIARD---AAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSS----VSGVMGNRGQ  174 (267)
T ss_dssp             HCCCSEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECC----HHHHHCCTTC
T ss_pred             hCCccEEEECCCCCCC---CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcc----hHhccCCCCC
Confidence            9999999999876642   4566789999999999999999999999998886 566799999994    3333333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhcc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~  236 (255)
                         ..|++||+|++++++.++.|++++||+||+|+| +.++|+                   ++  |+|++.++.+|  +
T Consensus       175 ---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~p~~~~~~~edva~~~~~L--~  248 (267)
T 4iiu_A          175 ---VNYSAAKAGIIGATKALAIELAKRKITVNCIAP-GLIDTGMIEMEESALKEAMSMIPMKRMGQAEEVAGLASYL--M  248 (267)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSTTCCCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--H
T ss_pred             ---chhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEE-eeecCCcccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence               779999999999999999999999999999999 887775                   11  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCc
Q 025252          237 DDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~  254 (255)
                      ++.+.++||++|.+|||+
T Consensus       249 s~~~~~itG~~i~vdGG~  266 (267)
T 4iiu_A          249 SDIAGYVTRQVISINGGM  266 (267)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CCcccCccCCEEEeCCCc
Confidence            899999999999999997

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=9.6e-41  Score=280.66  Aligned_cols=220  Identities=21%  Similarity=0.267  Sum_probs=187.2

Q ss_pred             eecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||+  +|||++++++|+++|++|++++|+.  +..+++.++..  ++.++.+|++++++++++++++.+.
T Consensus        23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~  100 (280)
T 3nrc_A           23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFN--PAAVLPCDVISDQEIKDLFVELGKV  100 (280)
T ss_dssp             TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGC--CSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHHHHHHH
Confidence            3689999999988  7799999999999999999999987  44455544443  5889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCC-CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILD-TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++++|++|||||...... ..++.+ .+.++|++++++|+.++++++++++|.|+++ .++||++||..    ...+.++
T Consensus       101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~g~iv~isS~~----~~~~~~~  175 (280)
T 3nrc_A          101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR-NASMVALTYIG----AEKAMPS  175 (280)
T ss_dssp             CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT-TCEEEEEECGG----GTSCCTT
T ss_pred             cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEeccc----cccCCCC
Confidence            999999999988654311 123334 7899999999999999999999999999755 79999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|++++++.++.|++++||+||+|+| +.++|+                      ++  |+|++..+++
T Consensus       176 ~---~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~  251 (280)
T 3nrc_A          176 Y---NTMGVAKASLEATVRYTALALGEDGIKVNAVSA-GPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAF  251 (280)
T ss_dssp             T---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHH
T ss_pred             c---hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEee-ccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            3   679999999999999999999999999999999 877775                      11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |  +++.+.++||++|.+|||++
T Consensus       252 l--~s~~~~~~tG~~i~vdgG~~  272 (280)
T 3nrc_A          252 L--CSDMATGITGEVVHVDAGYH  272 (280)
T ss_dssp             T--TSGGGTTCCSCEEEESTTGG
T ss_pred             H--hCcccCCcCCcEEEECCCcc
Confidence            9  89999999999999999974

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=4.9e-41  Score=280.83  Aligned_cols=219  Identities=21%  Similarity=0.270  Sum_probs=186.2

Q ss_pred             eecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||  ++|||++++++|+++|++|++++|+.+. .+++.++++ .++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (269)
T 2h7i_A            4 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAI   82 (269)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC-CCceEEEccCCCHHHHHHHHHHHHHHh
Confidence            367999999999  9999999999999999999999998765 455655553 468889999999999999999999999


Q ss_pred             C---CccEEEEcCCCccccC--ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252          100 G---KLDILVNSGCNLEYRG--FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       100 g---~id~li~~a~~~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      |   ++|++|||||......  ..++.+.+.++|++++++|+.++++++++++|+|++  .|+||++||...     .+.
T Consensus        83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~iss~~~-----~~~  155 (269)
T 2h7i_A           83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP--GGSIVGMDFDPS-----RAM  155 (269)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECCCS-----SCC
T ss_pred             CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCeEEEEcCccc-----ccc
Confidence            9   9999999987653110  245677899999999999999999999999999964  489999995432     122


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------------H
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------------E  221 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------------~  221 (255)
                      +.   ...|++||++++++++.++.|++++|||||+|+| |.++|+                                 +
T Consensus       156 ~~---~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr  231 (269)
T 2h7i_A          156 PA---YNWMTVAKSALESVNRFVAREAGKYGVRSNLVAA-GPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWN  231 (269)
T ss_dssp             TT---THHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCC
T ss_pred             Cc---hHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec-CcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccC
Confidence            22   2679999999999999999999999999999999 665543                                 1


Q ss_pred             h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  |+|++.+++||  +++.+.++||++|.+|||++
T Consensus       232 ~~~p~dvA~~v~~L--~s~~~~~itG~~i~vdGG~~  265 (269)
T 2h7i_A          232 MKDATPVAKTVCAL--LSDWLPATTGDIIYADGGAH  265 (269)
T ss_dssp             TTCCHHHHHHHHHH--HSSSCTTCCSEEEEESTTGG
T ss_pred             CCCHHHHHHHHHHH--hCchhccCcceEEEecCCee
Confidence            3  78999999999  89999999999999999974

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-41  Score=278.00  Aligned_cols=213  Identities=19%  Similarity=0.196  Sum_probs=185.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++||||++|||++++++|+++|  +.|++.+|+++..+++.++++ .++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id   80 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-DRFFYVVGDITEDSVLKQLVNAAVKGHGKID   80 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-GGEEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHhcCCcc
Confidence            7899999999999999999999985  789999999888888877764 5789999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++ |+||++||..+    ..+.++.   ..|
T Consensus        81 ~lvnnAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~----~~~~~~~---~~Y  150 (254)
T 3kzv_A           81 SLVANAGVLEP--VQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDAC----NMYFSSW---GAY  150 (254)
T ss_dssp             EEEEECCCCCC--CTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCC----CCSSCCS---HHH
T ss_pred             EEEECCcccCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchh----ccCCCCc---chH
Confidence            99999886432  25677889999999999999999999999999997655 99999996543    2233333   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--HHhhhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--IASIANAALY  232 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~~~~~~~~~~  232 (255)
                      ++||++++++++.++.|+  .|||||+|+| |.++|+                             ++  |+|++.+++|
T Consensus       151 ~asK~a~~~~~~~la~e~--~~i~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~  227 (254)
T 3kzv_A          151 GSSKAALNHFAMTLANEE--RQVKAIAVAP-GIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAK  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHC--TTSEEEEEEC-SSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc--cCcEEEEEeC-CcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHH
Confidence            999999999999999998  6899999999 766654                             12  8999999999


Q ss_pred             hhccCCC-CCeeeceeEEecCCc
Q 025252          233 NMAKDDD-TSYVGKQNLLVNGGF  254 (255)
Q Consensus       233 l~~~~~~-~~~~~G~~i~~dgG~  254 (255)
                      |  +++. +.++||+++.+|||.
T Consensus       228 L--~s~~~~~~itG~~i~vdg~~  248 (254)
T 3kzv_A          228 L--ALHGIPDGVNGQYLSYNDPA  248 (254)
T ss_dssp             H--HHHCCCGGGTTCEEETTCGG
T ss_pred             H--HhhcccCCCCccEEEecCcc
Confidence            9  8888 499999999999984

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-40  Score=278.05  Aligned_cols=217  Identities=22%  Similarity=0.285  Sum_probs=187.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ..++.++.+|++|+++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            468999999999999999999999999999999999888877776653  246888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    +..+.++.   .
T Consensus        82 iD~lVnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~----~~~~~~~~---~  151 (264)
T 3tfo_A           82 IDVLVNNAGVMP---LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIG----ALSVVPTA---A  151 (264)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTCCCTTC---H
T ss_pred             CCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHH----HcccCCCC---h
Confidence            999999988654   3567788999999999999999999999999999888889999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H-h--HHhhhhhhhhhhccCCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E-A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~-~--~~~~~~~~~~l~~~~~~~  240 (255)
                      .|++||+++++|++.++.|+ + |||||+|+| |.++|+                  + .  |+|++.+++++  +++..
T Consensus       152 ~Y~asKaal~~l~~~la~e~-~-gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l--~s~~~  226 (264)
T 3tfo_A          152 VYCATKFAVRAISDGLRQES-T-NIRVTCVNP-GVVESELAGTITHEETMAAMDTYRAIALQPADIARAVRQV--IEAPQ  226 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHC-S-SEEEEEEEE-CCC-----------------------CCCHHHHHHHHHHH--HHSCT
T ss_pred             hHHHHHHHHHHHHHHHHHhC-C-CCEEEEEec-CCCcCcccccccchhHHHHHHhhhccCCCHHHHHHHHHHH--hcCCc
Confidence            79999999999999999998 4 999999999 887775                  0 1  99999999999  88999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .+.+|+.+..++|+.
T Consensus       227 ~~~~~~i~i~p~~~~  241 (264)
T 3tfo_A          227 SVDTTEITIRPTASG  241 (264)
T ss_dssp             TEEEEEEEEEECC--
T ss_pred             cCccceEEEecCccc
Confidence            999999999998863

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=9e-41  Score=280.07  Aligned_cols=219  Identities=24%  Similarity=0.317  Sum_probs=181.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC---CCceEEEEeeCCCH----HHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG---HQDVCYIHCDVSNE----REVINLVDT   94 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~---~~~~~~~~~D~~~~----~~~~~~~~~   94 (255)
                      +|++|+++||||++|||++++++|+++|++|++++| +++..+++.+++.   ..++.++.+|++|+    +++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   87 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC   87 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence            478999999999999999999999999999999999 8777666665552   35788999999999    999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCCh-----------HHHHHHHhhhhhhHHHHHHHHHHHhcCCCC------Cc
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPK-----------SDLERLLAVNTIGGFLVAKHAARVMVPRRR------GC  157 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~------~~  157 (255)
                      +.+.+|++|+||||||....   .++.+.+.           ++|++++++|+.++++++++++|.|+ ++.      ++
T Consensus        88 ~~~~~g~id~lv~nAg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~~~~~g~  163 (276)
T 1mxh_A           88 SFRAFGRCDVLVNNASAYYP---TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EGGAWRSRNLS  163 (276)
T ss_dssp             HHHHHSCCCEEEECCCCCCC---CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC--------CCCEE
T ss_pred             HHHhcCCCCEEEECCCCCCC---CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cCCCCCCCCcE
Confidence            99999999999999886542   34556677           99999999999999999999999997 555      89


Q ss_pred             EEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------
Q 025252          158 ILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------  220 (255)
Q Consensus       158 ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------  220 (255)
                      ||++||..    ...+.++.   ..|++||++++.+++.++.|++++||+||+|+| +.+.|+                 
T Consensus       164 iv~isS~~----~~~~~~~~---~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~p~  235 (276)
T 1mxh_A          164 VVNLCDAM----TDLPLPGF---CVYTMAKHALGGLTRAAALELAPRHIRVNAVAP-GLSLLPPAMPQETQEEYRRKVPL  235 (276)
T ss_dssp             EEEECCGG----GGSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBSCCSSSCHHHHHHHHTTCTT
T ss_pred             EEEECchh----hcCCCCCC---eehHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CcccCCccCCHHHHHHHHhcCCC
Confidence            99999543    33333322   679999999999999999999999999999999 665442                 


Q ss_pred             -H-h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 -E-A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 -~-~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       + +  |+|++.+++++  +++.+.++||+++.+|||++
T Consensus       236 ~r~~~~~~dva~~v~~l--~s~~~~~~tG~~~~vdgG~~  272 (276)
T 1mxh_A          236 GQSEASAAQIADAIAFL--VSKDAGYITGTTLKVDGGLI  272 (276)
T ss_dssp             TSCCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             CCCCCCHHHHHHHHHHH--hCccccCccCcEEEECCchh
Confidence             2 4  89999999999  88888999999999999973

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-41  Score=283.87  Aligned_cols=220  Identities=26%  Similarity=0.373  Sum_probs=188.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--C---ceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--Q---DVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~---~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++..  .   ++.++.+|++|+++++++++++.
T Consensus        22 ~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  101 (297)
T 1xhl_A           22 ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL  101 (297)
T ss_dssp             -CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998877766655421  2   68899999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccC--CCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVS--ILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +.+|++|+||||||....   .+  +.+.+.++|++++++|+.++++++++++|.|++++ |+||++||..+.    .+.
T Consensus       102 ~~~g~iD~lvnnAG~~~~---~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~----~~~  173 (297)
T 1xhl_A          102 AKFGKIDILVNNAGANLA---DGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAG----PQA  173 (297)
T ss_dssp             HHHSCCCEEEECCCCCCC---CSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGS----SSC
T ss_pred             HhcCCCCEEEECCCcCcC---CCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhc----cCC
Confidence            999999999999876542   33  66789999999999999999999999999997666 999999955332    222


Q ss_pred             -cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--
Q 025252          175 -LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--  222 (255)
Q Consensus       175 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--  222 (255)
                       ++   ...|++||++++++++.++.|++++|||||+|+| +.++|+                             ++  
T Consensus       174 ~~~---~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~  249 (297)
T 1xhl_A          174 HSG---YPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSP-GAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGK  249 (297)
T ss_dssp             CTT---SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBC
T ss_pred             CCC---cchHHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CCCcCccccccccccccccchHHHHHHHHhcCCCCCCcC
Confidence             22   2679999999999999999999999999999999 665442                             11  


Q ss_pred             HHhhhhhhhhhhccCCC-CCeeeceeEEecCCcC
Q 025252          223 IASIANAALYNMAKDDD-TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~-~~~~~G~~i~~dgG~~  255 (255)
                      |+|++.+++++  +++. +.++||+++.+|||+.
T Consensus       250 pedvA~~v~~l--~s~~~~~~itG~~i~vdGG~~  281 (297)
T 1xhl_A          250 PEEIANIIVFL--ADRNLSSYIIGQSIVADGGST  281 (297)
T ss_dssp             HHHHHHHHHHH--HCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHHHH--hCCcccCCccCcEEEECCCcc
Confidence            89999999999  8887 8899999999999973

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=1.1e-40  Score=279.78  Aligned_cols=220  Identities=26%  Similarity=0.343  Sum_probs=189.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus        19 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   98 (277)
T 2rhc_B           19 TQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYG   98 (277)
T ss_dssp             CTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            5789999999999999999999999999999999999877766655552  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHH--hcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARV--MVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.  |++++.++||++||..    ...+.++. 
T Consensus        99 ~iD~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~-  170 (277)
T 2rhc_B           99 PVDVLVNNAGRPG---GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTG----GKQGVVHA-  170 (277)
T ss_dssp             SCSEEEECCCCCC---CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGG----GTSCCTTC-
T ss_pred             CCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccc----cccCCCCC-
Confidence            9999999987654   245667899999999999999999999999999  8777779999999543    22222222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IAS  225 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~  225 (255)
                        ..|++||++++.+++.++.|++++||+||+|+| +.++|+                               ++  |+|
T Consensus       171 --~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~d  247 (277)
T 2rhc_B          171 --APYSASKHGVVGFTKALGLELARTGITVNAVCP-GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE  247 (277)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEE-CSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHH
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEec-CcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHH
Confidence              679999999999999999999999999999999 654432                               11  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+++++  +++.+.++||+++.+|||++
T Consensus       248 vA~~v~~l--~s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          248 VAEMVAYL--IGPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             HHHHHHHH--HSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHH--hCchhcCCCCcEEEECCCcc
Confidence            99999999  88888999999999999974

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=4e-40  Score=277.26  Aligned_cols=223  Identities=22%  Similarity=0.379  Sum_probs=187.4

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKLG--HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++.+++++|+++||||++|||++++++|+++|++|++++|+.+. .+++.+++.  ..++.++.+|++|.++++++++++
T Consensus        22 ~~~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~  101 (283)
T 1g0o_A           22 PQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEA  101 (283)
T ss_dssp             GGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CcccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999998654 333333332  246889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|  ++.|+||++||..+    ..+.+
T Consensus       102 ~~~~g~iD~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~--~~~g~iv~isS~~~----~~~~~  172 (283)
T 1g0o_A          102 VKIFGKLDIVCSNSGVVS---FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHL--EIGGRLILMGSITG----QAKAV  172 (283)
T ss_dssp             HHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHS--CTTCEEEEECCGGG----TCSSC
T ss_pred             HHHcCCCCEEEECCCcCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--hcCCeEEEEechhh----ccCCC
Confidence            999999999999987653   2456778999999999999999999999999999  35689999995432    22221


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------H---h
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------E---A  222 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~---~  222 (255)
                      .  +...|++||++++++++.++.|++++||+||+|+| +.++|+                              +   +
T Consensus       173 ~--~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~  249 (283)
T 1g0o_A          173 P--KHAVYSGSKGAIETFARCMAIDMADKKITVNVVAP-GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRV  249 (283)
T ss_dssp             S--SCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSC
T ss_pred             C--CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCC
Confidence            1  13679999999999999999999999999999999 655443                              0   1


Q ss_pred             --HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          223 --IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        |+|++.+++||  +++.+.++||+++.+|||++
T Consensus       250 ~~p~dvA~~v~~l--~s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          250 GLPIDIARVVCFL--ASNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             BCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTCC
T ss_pred             cCHHHHHHHHHHH--hCccccCcCCCEEEeCCCcc
Confidence              78999999999  88889999999999999974

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=1.5e-41  Score=291.02  Aligned_cols=218  Identities=27%  Similarity=0.409  Sum_probs=187.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC----------cchHHHHHHHhC--CCceEEEEeeCCCHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ----------DNLGQALADKLG--HQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~----------~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~   90 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+          .+..++..+++.  ..++.++.+|++|++++++
T Consensus        24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~  103 (322)
T 3qlj_A           24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG  103 (322)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            4789999999999999999999999999999999987          555666655543  2468889999999999999


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC------CCcEEEeccC
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR------RGCILYTTGT  164 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~------~~~ii~is~~  164 (255)
                      +++++.+.+|++|+||||||....   .++.+.+.++|++++++|+.++++++++++|+|.+.+      .|+||++||.
T Consensus       104 ~~~~~~~~~g~iD~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~  180 (322)
T 3qlj_A          104 LIQTAVETFGGLDVLVNNAGIVRD---RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSG  180 (322)
T ss_dssp             HHHHHHHHHSCCCEEECCCCCCCC---CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCH
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCH
Confidence            999999999999999999886642   4667889999999999999999999999999986432      3799999943


Q ss_pred             CCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh--HHh
Q 025252          165 GTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA--IAS  225 (255)
Q Consensus       165 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~--~~~  225 (255)
                          ....+.++.   ..|++||+|+++|++.++.|++++|||||+|+| + +.|+                 ++  |+|
T Consensus       181 ----~~~~~~~~~---~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P-G-~~t~~~~~~~~~~~~~~~~~~~~~~ped  251 (322)
T 3qlj_A          181 ----AGLQGSVGQ---GNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAP-S-ARTRMTETVFAEMMATQDQDFDAMAPEN  251 (322)
T ss_dssp             ----HHHHCBTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-C-TTSCCSCCSCCC--------CCTTCGGG
T ss_pred             ----HHccCCCCC---ccHHHHHHHHHHHHHHHHHHhcccCcEEEEecC-C-CCCccchhhhhhhhhccccccCCCCHHH
Confidence                333333333   679999999999999999999999999999999 5 5553                 11  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++.+++||  +++.+.++||++|.+|||+
T Consensus       252 va~~v~~L--~s~~~~~itG~~i~vdGG~  278 (322)
T 3qlj_A          252 VSPLVVWL--GSAEARDVTGKVFEVEGGK  278 (322)
T ss_dssp             THHHHHHH--TSGGGGGCCSCEEEEETTE
T ss_pred             HHHHHHHH--hCccccCCCCCEEEECCCc
Confidence            99999999  9999999999999999996

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=2.9e-41  Score=279.83  Aligned_cols=212  Identities=24%  Similarity=0.381  Sum_probs=180.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..+         .+.++.+|++|+++++++++++.+.+|+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~   87 (253)
T 2nm0_A           17 RSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE---------GFLAVKCDITDTEQVEQAYKEIEETHGP   87 (253)
T ss_dssp             ---CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT---------TSEEEECCTTSHHHHHHHHHHHHHHTCS
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc---------cceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            5688999999999999999999999999999999999876432         3778999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+.    .+.++.   .
T Consensus        88 iD~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~----~~~~~~---~  157 (253)
T 2nm0_A           88 VEVLIANAGVTK---DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGL----LGSAGQ---A  157 (253)
T ss_dssp             CSEEEEECSCCT---TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCC----CCHHHH---H
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhC----CCCCCc---H
Confidence            999999987654   245667788999999999999999999999999987778999999965432    222222   5


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||++++.+++.++.|++++||+||+|+| +.++|+                 +   +  |+|++..+.++  +++.
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i~~l--~s~~  234 (253)
T 2nm0_A          158 NYAASKAGLVGFARSLARELGSRNITFNVVAP-GFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATVRFL--ASDD  234 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEE-CSBCC---------CHHHHHTTCTTCSCBCHHHHHHHHHHH--HSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-CcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCcc
Confidence            69999999999999999999999999999999 666654                 1   1  89999999999  8888


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.+++|+++.+|||++
T Consensus       235 ~~~~tG~~i~vdGG~~  250 (253)
T 2nm0_A          235 ASYITGAVIPVDGGLG  250 (253)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             ccCCcCcEEEECCccc
Confidence            9999999999999974

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=9.7e-41  Score=280.58  Aligned_cols=222  Identities=26%  Similarity=0.361  Sum_probs=187.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--C---ceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--Q---DVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~---~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++..  .   ++.++.+|++|+++++++++++.+
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (280)
T 1xkq_A            3 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   82 (280)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999999998877776665532  2   688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCc-cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC-c
Q 025252           98 KFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG-L  175 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~-~  175 (255)
                      .+|++|+||||||....... ..+.+.+.++|++++++|+.+++++++.++|.|++++ ++||++||..+    ..+. +
T Consensus        83 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~----~~~~~~  157 (280)
T 1xkq_A           83 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA----GPQAQP  157 (280)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG----SSSCCC
T ss_pred             hcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc----cCCCCC
Confidence            99999999999876542110 0156778999999999999999999999999997665 99999995533    2222 2


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--HH
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--IA  224 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~~  224 (255)
                      +   ...|++||++++++++.++.|++++|||||+|+| +.++|+                             ++  |+
T Consensus       158 ~---~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pe  233 (280)
T 1xkq_A          158 D---FLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP-GMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPE  233 (280)
T ss_dssp             S---SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHH
T ss_pred             c---ccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEee-CcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHH
Confidence            2   2679999999999999999999999999999999 655442                             11  89


Q ss_pred             hhhhhhhhhhccCCC-CCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDD-TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~-~~~~~G~~i~~dgG~~  255 (255)
                      |++.+++++  +++. +.++||+++.+|||+.
T Consensus       234 dvA~~v~~l--~s~~~~~~~tG~~i~vdgG~~  263 (280)
T 1xkq_A          234 HIANIILFL--ADRNLSFYILGQSIVADGGTS  263 (280)
T ss_dssp             HHHHHHHHH--HCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHh--cCcccccCccCCeEEECCCcc
Confidence            999999999  8887 8899999999999973

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=2.3e-40  Score=273.11  Aligned_cols=217  Identities=24%  Similarity=0.341  Sum_probs=188.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeC--CCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDV--SNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~--~~~~~~~~~~~~~~   96 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.   ..+..++.+|+  ++.++++++++++.
T Consensus        10 ~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~   89 (247)
T 3i1j_A           10 ELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVE   89 (247)
T ss_dssp             TTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999888777766553   24566777777  99999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.+|++|++|||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.++|+++||..    ...+.++
T Consensus        90 ~~~g~id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~----~~~~~~~  163 (247)
T 3i1j_A           90 HEFGRLDGLLHNASIIGP--RTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSV----GRKGRAN  163 (247)
T ss_dssp             HHHSCCSEEEECCCCCCC--CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGG----GTSCCTT
T ss_pred             HhCCCCCEEEECCccCCC--CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchh----hcCCCCC
Confidence            999999999999886432  2567788999999999999999999999999999888889999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhhccCCCCC
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMAE------------A--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      .   ..|++||++++++++.++.|+++ +|||||+|+| |.++|+.            +  |+|++..++||  +++++.
T Consensus       164 ~---~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~p~dva~~~~~l--~s~~~~  237 (247)
T 3i1j_A          164 W---GAYGVSKFATEGLMQTLADELEGVTAVRANSINP-GATRTGMRAQAYPDENPLNNPAPEDIMPVYLYL--MGPDST  237 (247)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEC-CCCSSHHHHHHSTTSCGGGSCCGGGGTHHHHHH--HSGGGT
T ss_pred             c---chhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEec-CcccCccchhcccccCccCCCCHHHHHHHHHHH--hCchhc
Confidence            3   67999999999999999999987 8999999999 8888861            1  89999999999  899999


Q ss_pred             eeeceeEEe
Q 025252          242 YVGKQNLLV  250 (255)
Q Consensus       242 ~~~G~~i~~  250 (255)
                      ++|||+|.+
T Consensus       238 ~itG~~i~~  246 (247)
T 3i1j_A          238 GINGQALNA  246 (247)
T ss_dssp             TCCSCEEEC
T ss_pred             cccCeeecC
Confidence            999999986

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=8.3e-41  Score=276.20  Aligned_cols=219  Identities=28%  Similarity=0.442  Sum_probs=179.3

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ....++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++. .++.++.+|+++.+++++++++.   
T Consensus         7 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~---   82 (249)
T 3f9i_A            7 HHMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-DNYTIEVCNLANKEECSNLISKT---   82 (249)
T ss_dssp             --CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-SSEEEEECCTTSHHHHHHHHHTC---
T ss_pred             cccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-cCccEEEcCCCCHHHHHHHHHhc---
Confidence            33457899999999999999999999999999999999999988888887776 47888999999999988877643   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       +++|++|||||....   ..+.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++. 
T Consensus        83 -~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~-  153 (249)
T 3f9i_A           83 -SNLDILVCNAGITSD---TLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG----IAGNPGQ-  153 (249)
T ss_dssp             -SCCSEEEECCC----------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC------CCSCS-
T ss_pred             -CCCCEEEECCCCCCC---CccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHh----ccCCCCC-
Confidence             789999999876542   3455678899999999999999999999999998888899999996543    2233333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~  236 (255)
                        ..|++||++++++++.++.|++++||+||+|+| +.++|+                    ++  |+|++.++.++  +
T Consensus       154 --~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  228 (249)
T 3f9i_A          154 --ANYCASKAGLIGMTKSLSYEVATRGITVNAVAP-GFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFL--A  228 (249)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH--H
T ss_pred             --chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEec-CccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--c
Confidence              679999999999999999999999999999999 877775                    11  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||+++.+|||+.
T Consensus       229 s~~~~~~tG~~~~vdgG~~  247 (249)
T 3f9i_A          229 SNNASYITGQTLHVNGGML  247 (249)
T ss_dssp             SGGGTTCCSCEEEESTTSS
T ss_pred             CCccCCccCcEEEECCCEe
Confidence            8899999999999999974

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.7e-40  Score=274.23  Aligned_cols=212  Identities=22%  Similarity=0.346  Sum_probs=179.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++         +..+.+|++|+++++++++++.+.+|+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---------~~~~~~D~~~~~~~~~~~~~~~~~~g~   81 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKG---------LFGVEVDVTDSDAVDRAFTAVEEHQGP   81 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT---------SEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHH---------hcCeeccCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999998764321         224889999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+.    .+.++   ..
T Consensus        82 id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~----~~~~~---~~  151 (247)
T 1uzm_A           82 VEVLVSNAGLSA---DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL----WGIGN---QA  151 (247)
T ss_dssp             CSEEEEECSCCC--------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------C---CH
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc----cCCCC---Ch
Confidence            999999987654   245677899999999999999999999999999987778999999965432    22222   26


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||++++.+++.++.|++++||+||+|+| +.++|+                    ++  |+|+++.++++  +++.
T Consensus       152 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l--~s~~  228 (247)
T 1uzm_A          152 NYAASKAGVIGMARSIARELSKANVTANVVAP-GYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFL--ASED  228 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHH--HSGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEe-CCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCcc
Confidence            79999999999999999999999999999999 766654                    11  89999999999  8888


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.+++|+++.+|||+.
T Consensus       229 ~~~~~G~~i~vdgG~~  244 (247)
T 1uzm_A          229 ASYISGAVIPVDGGMG  244 (247)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             ccCCcCCEEEECCCcc
Confidence            8999999999999974

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-40  Score=270.93  Aligned_cols=212  Identities=20%  Similarity=0.221  Sum_probs=180.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |.+|+++||||++|||++++++|+++|++|++++|+++.+++..++++ .++.++.+|++|+++++++++++.+.+|++|
T Consensus         1 Ms~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            1 MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             --CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            467999999999999999999999999999999999988888877774 3689999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++ ++||++||..    +..+.++.   ..|
T Consensus        80 ~lvnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~----~~~~~~~~---~~Y  148 (235)
T 3l6e_A           80 LVLHCAGTGE---FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG-GVLANVLSSA----AQVGKANE---SLY  148 (235)
T ss_dssp             EEEEECCCC---------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-EEEEEECCEE----CCSSCSSH---HHH
T ss_pred             EEEECCCCCC---CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEEeCHH----hcCCCCCC---cHH
Confidence            9999988654   35677889999999999999999999999999997655 5999999543    33333333   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------Hh--HHhhhhhhhhhhccC-CCCCeeeceeEE
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------EA--IASIANAALYNMAKD-DDTSYVGKQNLL  249 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------~~--~~~~~~~~~~l~~~~-~~~~~~~G~~i~  249 (255)
                      ++||+++++|++.++.|++++|||||+|+| |.++|+           ++  |+|+++.++++  ++ +...+++|-.+.
T Consensus       149 ~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~pedvA~~v~~l--~~~~~~~~i~~i~~~  225 (235)
T 3l6e_A          149 CASKWGMRGFLESLRAELKDSPLRLVNLYP-SGIRSEFWDNTDHVDPSGFMTPEDAAAYMLDA--LEARSSCHVTDLFIG  225 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEEE-EEECCCC-----------CBCHHHHHHHHHHH--TCCCSSEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHhhccCCEEEEEeC-CCccCcchhccCCCCCcCCCCHHHHHHHHHHH--HhCCCCcceeeEEEe
Confidence            999999999999999999999999999999 888776           12  99999999999  66 778899987765


Q ss_pred             e
Q 025252          250 V  250 (255)
Q Consensus       250 ~  250 (255)
                      =
T Consensus       226 ~  226 (235)
T 3l6e_A          226 R  226 (235)
T ss_dssp             E
T ss_pred             c
Confidence            3

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=3.3e-40  Score=273.72  Aligned_cols=217  Identities=22%  Similarity=0.312  Sum_probs=184.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++|+++||||++|||++++++|+++|++|++++|+++  ++..+++.  ..++.++.+|++|+++++++++++.+.+|+
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   79 (255)
T 2q2v_A            2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGG   79 (255)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            67899999999999999999999999999999999876  33333332  246888999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++.   .
T Consensus        80 id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---~  149 (255)
T 2q2v_A           80 VDILVNNAGIQH---VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHG----LVGSTGK---A  149 (255)
T ss_dssp             CSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG----TSCCTTB---H
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchh----ccCCCCc---h
Confidence            999999987653   24566789999999999999999999999999998877899999995432    2232222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H---h--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E---A--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~---~--~~~~~~  228 (255)
                      .|++||++++++++.++.|++++||+||+|+| +.++|+                            +   +  |+|++.
T Consensus       150 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  228 (255)
T 2q2v_A          150 AYVAAKHGVVGLTKVVGLETATSNVTCNAICP-GWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGE  228 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEE-SSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEee-CCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHH
Confidence            79999999999999999999999999999999 654432                            0   1  788999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++++  +++.+.+++|+++.+|||++
T Consensus       229 ~~~~l--~s~~~~~~tG~~~~vdgG~~  253 (255)
T 2q2v_A          229 LVLFL--CSEAGSQVRGAAWNVDGGWL  253 (255)
T ss_dssp             HHHHH--TSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHH--hCCccCCCCCCEEEECCCcc
Confidence            99999  88888999999999999973

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5e-40  Score=271.92  Aligned_cols=213  Identities=26%  Similarity=0.319  Sum_probs=182.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++++|+++||||++|||++++++|+++|++|++++|+++.        ....+.++.+|++|+++++++++++.+.+|+
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYPFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCSSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCCceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999999999999999999999999999999998763        1113778899999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..    ...+.++   ..
T Consensus        75 id~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~---~~  144 (250)
T 2fwm_X           75 LDALVNAAGILR---MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDA----AHTPRIG---MS  144 (250)
T ss_dssp             CCEEEECCCCCC---CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG----GTSCCTT---CH
T ss_pred             CCEEEECCCcCC---CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchh----hCCCCCC---Cc
Confidence            999999987654   2456778999999999999999999999999999887789999999543    2333322   26


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------H---h--HHhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------E---A--IASIANA  229 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~---~--~~~~~~~  229 (255)
                      .|++||++++.+++.++.|++++||+||+|+| +.++|+                           +   +  |+|++.+
T Consensus       145 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (250)
T 2fwm_X          145 AYGASKAALKSLALSVGLELAGSGVRCNVVSP-GSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANT  223 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCC------------------------------------CHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhCccCCEEEEEEC-CcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHH
Confidence            79999999999999999999999999999999 544332                           1   1  7899999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++  +++.+.+++|+++.+|||++
T Consensus       224 v~~l--~s~~~~~~tG~~i~vdGG~~  247 (250)
T 2fwm_X          224 ILFL--ASDLASHITLQDIVVDGGST  247 (250)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTTT
T ss_pred             HHHH--hCccccCCCCCEEEECCCcc
Confidence            9999  88888999999999999974

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.3e-40  Score=273.34  Aligned_cols=214  Identities=21%  Similarity=0.245  Sum_probs=181.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.  ..++.++.+|++|+++++++++++.+. 
T Consensus         3 ~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-   81 (252)
T 3h7a_A            3 LTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-   81 (252)
T ss_dssp             --CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-
Confidence            46789999999999999999999999999999999999988888777663  257889999999999999999999999 


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    +..+.++.  
T Consensus        82 g~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~--  152 (252)
T 3h7a_A           82 APLEVTIFNVGANV---NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATA----SLRGGSGF--  152 (252)
T ss_dssp             SCEEEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGG----GTCCCTTC--
T ss_pred             CCceEEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHH----HcCCCCCC--
Confidence            99999999988654   2567788999999999999999999999999999888889999999543    33333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEE-eEeccCcchhhh-----------------H--h--HHhhhhhhhhhhccC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRV-DCVSHTYGLAMA-----------------E--A--IASIANAALYNMAKD  237 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v-~~v~p~~~~~t~-----------------~--~--~~~~~~~~~~l~~~~  237 (255)
                       ..|++||+|+++|++.++.|++++|||| |+|+| |.++|+                 +  +  |+|++.+++++  ++
T Consensus       153 -~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~~~~l--~s  228 (252)
T 3h7a_A          153 -AAFASAKFGLRAVAQSMARELMPKNIHVAHLIID-SGVDTAWVRERREQMFGKDALANPDLLMPPAAVAGAYWQL--YQ  228 (252)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHHHH--HH
T ss_pred             -ccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecC-CccCChhhhccchhhhhhhhhcCCccCCCHHHHHHHHHHH--Hh
Confidence             6799999999999999999999999999 99999 888775                 1  1  89999999999  88


Q ss_pred             CCCCeeeceeEE
Q 025252          238 DDTSYVGKQNLL  249 (255)
Q Consensus       238 ~~~~~~~G~~i~  249 (255)
                      +....++|+...
T Consensus       229 ~~~~~~~~~i~~  240 (252)
T 3h7a_A          229 QPKSAWTFEMEI  240 (252)
T ss_dssp             CCGGGBCSEEEE
T ss_pred             CchhcceeeEEe
Confidence            888888888654

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=7.3e-40  Score=275.27  Aligned_cols=221  Identities=24%  Similarity=0.405  Sum_probs=188.3

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..+++.++++ .++.++++|++|.++++++++++ +.++
T Consensus        25 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~-~~~~  102 (281)
T 3ppi_A           25 IKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-NRAEFVSTNVTSEDSVLAAIEAA-NQLG  102 (281)
T ss_dssp             CGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHH-TTSS
T ss_pred             hhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHH-HHhC
Confidence            356899999999999999999999999999999999999998888888875 57999999999999999999999 7889


Q ss_pred             CccEEEEc-CCCccccCc--cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC------CCCCcEEEeccCCCccccc
Q 025252          101 KLDILVNS-GCNLEYRGF--VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP------RRRGCILYTTGTGTTACTE  171 (255)
Q Consensus       101 ~id~li~~-a~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~------~~~~~ii~is~~~~~~~~~  171 (255)
                      ++|++||| |+.......  ....+.+.++|++++++|+.+++++++.++|.+.+      ++.|+||++||..    ..
T Consensus       103 ~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~----~~  178 (281)
T 3ppi_A          103 RLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA----GY  178 (281)
T ss_dssp             EEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG----GT
T ss_pred             CCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc----cc
Confidence            99999999 554332111  01135788999999999999999999999999976      5678999999543    33


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhh
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIAN  228 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~  228 (255)
                      .+.++.   ..|++||+|++++++.++.|++++||+||+|+| |.++|+                     ++  |+|+++
T Consensus       179 ~~~~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~  254 (281)
T 3ppi_A          179 EGQIGQ---TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAP-GTMKTPIMESVGEEALAKFAANIPFPKRLGTPDEFAD  254 (281)
T ss_dssp             SCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTTCHHHHHHHHHTCCSSSSCBCHHHHHH
T ss_pred             CCCCCC---cccHHHHHHHHHHHHHHHHHHhhcCeEEEEEec-CcCCchhhhcccHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            333333   679999999999999999999999999999999 877775                     11  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++++  +++  .++||++|.+|||++
T Consensus       255 ~v~~l--~s~--~~~tG~~i~vdGG~~  277 (281)
T 3ppi_A          255 AAAFL--LTN--GYINGEVMRLDGAQR  277 (281)
T ss_dssp             HHHHH--HHC--SSCCSCEEEESTTCC
T ss_pred             HHHHH--HcC--CCcCCcEEEECCCcc
Confidence            99999  654  699999999999985

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=5.2e-40  Score=270.00  Aligned_cols=212  Identities=28%  Similarity=0.381  Sum_probs=182.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||++|||++++++|+++|++|++++|+++.   ..+++   .+.++.+|+++ ++++++++++.+.++++|++
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~---~~~~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~l   74 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE---AAQSL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHVL   74 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH---HHHHH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH---HHHhh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCEE
Confidence            6899999999999999999999999999999998765   23333   27788999999 99999999999999999999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      |||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||....    .+. ...+...|++
T Consensus        75 v~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~~-~~~~~~~Y~~  146 (239)
T 2ekp_A           75 VHAAAVNV---RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTF----TAG-GPVPIPAYTT  146 (239)
T ss_dssp             EECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----SCC-TTSCCHHHHH
T ss_pred             EECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc----cCC-CCCCCccHHH
Confidence            99987654   245678899999999999999999999999999987778999999965432    221 0122367999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhccCCCCC
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      ||++++.+++.++.|++++||+||+|+| +.++|+                   +   +  |+|+++.+.++  +++.+.
T Consensus       147 sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l--~s~~~~  223 (239)
T 2ekp_A          147 AKTALLGLTRALAKEWARLGIRVNLLCP-GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVL--CGDEAE  223 (239)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--TSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEe-CCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cCchhc
Confidence            9999999999999999999999999999 666543                   1   1  89999999999  888899


Q ss_pred             eeeceeEEecCCcC
Q 025252          242 YVGKQNLLVNGGFR  255 (255)
Q Consensus       242 ~~~G~~i~~dgG~~  255 (255)
                      ++||+++.+|||+.
T Consensus       224 ~~tG~~~~vdgG~~  237 (239)
T 2ekp_A          224 YLTGQAVAVDGGFL  237 (239)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CCCCCEEEECCCcc
Confidence            99999999999974

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=9.4e-40  Score=275.25  Aligned_cols=219  Identities=22%  Similarity=0.335  Sum_probs=184.1

Q ss_pred             ecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||+  +|||++++++|+++|++|++++|+++   ..+++.++.+  .+.++.+|++|+++++++++++.+.
T Consensus        19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFG--SDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            789999999999  99999999999999999999999875   2233333322  4778999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++|||||...... ..++.+.+.++|++++++|+.++++++++++|.|+++ .|+||++||..+    ..+.++.
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~----~~~~~~~  171 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR-NGAIVTLSYYGA----EKVVPHY  171 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS-CCEEEEEECGGG----TSBCTTT
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCEEEEEccchh----ccCCCCc
Confidence            999999999988654210 1345678999999999999999999999999999654 689999995432    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l  233 (255)
                         ..|++||++++++++.++.|++++||+||+|+| +.++|+                   +   +  |+|++.+++++
T Consensus       172 ---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l  247 (285)
T 2p91_A          172 ---NVMGIAKAALESTVRYLAYDIAKHGHRINAISA-GPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFL  247 (285)
T ss_dssp             ---THHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             ---cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEe-CcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence               679999999999999999999999999999999 766653                   1   1  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +++.+.+++|+++.+|||+.
T Consensus       248 --~s~~~~~~tG~~~~vdgg~~  267 (285)
T 2p91_A          248 --CSDWARAITGEVVHVDNGYH  267 (285)
T ss_dssp             --TSGGGTTCCSCEEEESTTGG
T ss_pred             --cCCcccCCCCCEEEECCCcc
Confidence              88889999999999999973

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=1.1e-39  Score=272.06  Aligned_cols=210  Identities=25%  Similarity=0.409  Sum_probs=183.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.         ..++.++.+|++|+++++++++++.+.+|++
T Consensus         5 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~---------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   75 (264)
T 2dtx_A            5 DLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG---------EAKYDHIECDVTNPDQVKASIDHIFKEYGSI   75 (264)
T ss_dssp             GGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC---------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc---------CCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999998764         2468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+    ..+.++.   ..
T Consensus        76 D~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---~~  145 (264)
T 2dtx_A           76 SVLVNNAGIES---YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA----SIITKNA---SA  145 (264)
T ss_dssp             CEEEECCCCCC---CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG----TSCCTTB---HH
T ss_pred             CEEEECCCCCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh----ccCCCCc---hh
Confidence            99999987654   25667889999999999999999999999999998888899999995432    2232222   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H---h--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E---A--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~---~--~~~~~~~  229 (255)
                      |++||++++.+++.++.|++++ ||||+|+| +.++|+                            +   +  |+|++.+
T Consensus       146 Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~  223 (264)
T 2dtx_A          146 YVTSKHAVIGLTKSIALDYAPL-LRCNAVCP-ATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASA  223 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTT-SEEEEEEE-CSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcCC-cEEEEEEe-CCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999998 99999999 655432                            1   1  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++++  +++.+.+++|+++.+|||+.
T Consensus       224 v~~l--~s~~~~~~tG~~i~vdGG~~  247 (264)
T 2dtx_A          224 VAFL--ASREASFITGTCLYVDGGLS  247 (264)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHH--hCchhcCCCCcEEEECCCcc
Confidence            9999  88888999999999999973

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.7e-40  Score=275.28  Aligned_cols=219  Identities=28%  Similarity=0.375  Sum_probs=185.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++|++|+++ .|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            57899999999999999999999999999887 667666666655542  257889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC---CCCcEEEeccCCCcccccccCcCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|||||.....  .++.+.+.++|++++++|+.+++++++.++|.|.+.   +.++||++||..+    ..+.+.  
T Consensus       105 id~li~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~--  176 (272)
T 4e3z_A          105 LDGLVNNAGIVDYP--QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAA----ILGSAT--  176 (272)
T ss_dssp             CCEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHH----HHCCTT--
T ss_pred             CCEEEECCCCCCCC--CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHh----ccCCCC--
Confidence            99999998865421  456778999999999999999999999999999763   4689999995432    222211  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH---------------------h--HHhhhhhhhhhhc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE---------------------A--IASIANAALYNMA  235 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~---------------------~--~~~~~~~~~~l~~  235 (255)
                      +...|++||++++++++.++.|++++||+|++|+| +.++|+.                     +  |+|++++++++  
T Consensus       177 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~edvA~~i~~l--  253 (272)
T 4e3z_A          177 QYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRP-GIIETDLHASGGLPDRAREMAPSVPMQRAGMPEEVADAILYL--  253 (272)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBC------------------CCTTSSCBCHHHHHHHHHHH--
T ss_pred             CcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEec-CCCcCCcccccCChHHHHHHhhcCCcCCCcCHHHHHHHHHHH--
Confidence            12569999999999999999999999999999999 8887751                     1  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCc
Q 025252          236 KDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++...++||+++.+|||.
T Consensus       254 ~s~~~~~~tG~~i~vdgG~  272 (272)
T 4e3z_A          254 LSPSASYVTGSILNVSGGR  272 (272)
T ss_dssp             HSGGGTTCCSCEEEESTTC
T ss_pred             hCCccccccCCEEeecCCC
Confidence            8899999999999999995

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1e-39  Score=271.87  Aligned_cols=220  Identities=24%  Similarity=0.289  Sum_probs=190.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.  ..++.++.+|++++++++++++++.+.+|
T Consensus        26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  105 (262)
T 3rkr_A           26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHG  105 (262)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence            3789999999999999999999999999999999999888777766653  25788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+    ..+.++.   
T Consensus       106 ~id~lv~~Ag~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~---  176 (262)
T 3rkr_A          106 RCDVLVNNAGVGWF--GGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG----KNPVADG---  176 (262)
T ss_dssp             CCSEEEECCCCCCC--SSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS----SCCCTTC---
T ss_pred             CCCEEEECCCccCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh----cCCCCCC---
Confidence            99999999876322  24667789999999999999999999999999998888899999996543    2233222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccCCCCCeeece
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                      ..|++||++++++++.++.|++++||+|++|+| |.++|+            ++  |+|++++++++  +++...+++|+
T Consensus       177 ~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~p~dvA~~v~~l--~s~~~~~~~g~  253 (262)
T 3rkr_A          177 AAYTASKWGLNGLMTSAAEELRQHQVRVSLVAP-GSVRTEFGVGLSAKKSALGAIEPDDIADVVALL--ATQADQSFISE  253 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCC----------------CCCHHHHHHHHHHH--HTCCTTCCEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-CCCcCCcccccccccccccCCCHHHHHHHHHHH--hcCccccccCc
Confidence            679999999999999999999999999999999 888876            11  89999999999  88999999999


Q ss_pred             eEEecCCc
Q 025252          247 NLLVNGGF  254 (255)
Q Consensus       247 ~i~~dgG~  254 (255)
                      .+..+.|-
T Consensus       254 ~~i~p~~~  261 (262)
T 3rkr_A          254 VLVRPTLK  261 (262)
T ss_dssp             EEEECCCC
T ss_pred             EEeccccC
Confidence            99988763

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=5.7e-40  Score=273.22  Aligned_cols=220  Identities=24%  Similarity=0.284  Sum_probs=184.1

Q ss_pred             eeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +++++|+++||||+  +|||++++++|+++|++|++++|+++   ..+++.++.+  .+.++.+|++|+++++++++++.
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~   81 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVK   81 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHH
Confidence            46789999999999  99999999999999999999999875   2333333332  47889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +.+|++|++|||||...... ..++.+.+.++|++++++|+.++++++++++|.|++  .|+||++||..+    ..+.+
T Consensus        82 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~----~~~~~  155 (261)
T 2wyu_A           82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYYAS----EKVVP  155 (261)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECGGG----TSBCT
T ss_pred             HHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc--CCEEEEEecccc----cCCCC
Confidence            99999999999987653200 134567899999999999999999999999999963  489999995432    22222


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~  231 (255)
                      +.   ..|++||++++.+++.++.|++++||+||+|+| +.++|+                   +   +  |+|++.+++
T Consensus       156 ~~---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~  231 (261)
T 2wyu_A          156 KY---NVMAIAKAALEASVRYLAYELGPKGVRVNAISA-GPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGL  231 (261)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             Cc---hHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEee-CCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            22   679999999999999999999999999999999 766553                   1   1  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++  +++.+.++||+++.+|||++
T Consensus       232 ~l--~s~~~~~~tG~~~~vdgG~~  253 (261)
T 2wyu_A          232 FL--LSPLASGITGEVVYVDAGYH  253 (261)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--cChhhcCCCCCEEEECCCcc
Confidence            99  88889999999999999973

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=4e-40  Score=271.84  Aligned_cols=214  Identities=27%  Similarity=0.467  Sum_probs=179.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..+++. ++  .++.++.+|++|+++++    ++.+.++++
T Consensus         3 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~--~~~~~~~~D~~~~~~~~----~~~~~~~~i   75 (246)
T 2ag5_A            3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY--PGIQTRVLDVTKKKQID----QFANEVERL   75 (246)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS--TTEEEEECCTTCHHHHH----HHHHHCSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc--cCceEEEeeCCCHHHHH----HHHHHhCCC
Confidence            367999999999999999999999999999999999876655444 33  26888999999999987    444557899


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....   .++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+.    .+.+  .+...
T Consensus        76 d~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~~~--~~~~~  146 (246)
T 2ag5_A           76 DVLFNVAGFVHH---GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS----VKGV--VNRCV  146 (246)
T ss_dssp             SEEEECCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTT----TBCC--TTBHH
T ss_pred             CEEEECCccCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhC----cCCC--CCCcc
Confidence            999999876542   45667899999999999999999999999999987778999999965432    2222  02267


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |++||++++.+++.++.|++++||+||+|+| +.+.|+                       +   +  |+|++++++++ 
T Consensus       147 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l-  224 (246)
T 2ag5_A          147 YSTTKAAVIGLTKSVAADFIQQGIRCNCVCP-GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL-  224 (246)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEee-CcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 655442                       1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||+++.+|||++
T Consensus       225 -~s~~~~~~tG~~i~vdgG~~  244 (246)
T 2ag5_A          225 -ASDESAYVTGNPVIIDGGWS  244 (246)
T ss_dssp             -HSGGGTTCCSCEEEECTTGG
T ss_pred             -hCccccCCCCCEEEECCCcc
Confidence             88999999999999999974

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2e-39  Score=271.56  Aligned_cols=211  Identities=24%  Similarity=0.297  Sum_probs=178.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++.+|+++||||++|||++++++|+++|++|++++|+.+.+++..++++ .++.++.+|++|+++++++++++.+.+|++
T Consensus        25 ~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  103 (272)
T 4dyv_A           25 KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-DDALCVPTDVTDPDSVRALFTATVEKFGRV  103 (272)
T ss_dssp             ---CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-SCCEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4789999999999999999999999999999999999988888888775 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCcccccccCcCCCCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      |+||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++  .|+||++||..+    ..+.++.   
T Consensus       104 D~lVnnAg~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~----~~~~~~~---  174 (272)
T 4dyv_A          104 DVLFNNAGTGAP--AIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA----TSPRPYS---  174 (272)
T ss_dssp             CEEEECCCCCCC--SSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST----TSCCTTC---
T ss_pred             CEEEECCCCCCC--CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh----cCCCCCc---
Confidence            999999886532  24677889999999999999999999999999998765  689999996543    2333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      ..|++||++++++++.++.|++++|||||+|+| +.++|+                   ++  |+|++.+++||  +++.
T Consensus       175 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL--~s~~  251 (272)
T 4dyv_A          175 APYTATKHAITGLTKSTSLDGRVHDIACGQIDI-GNADTPMAQKMKAGVPQADLSIKVEPVMDVAHVASAVVYM--ASLP  251 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-EECC------------------------CHHHHHHHHHHH--HHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEE-CcccChhhhhhcccchhhhhcccccCCCCHHHHHHHHHHH--hCCC
Confidence            679999999999999999999999999999999 888775                   12  89999999999  7654


Q ss_pred             CCeeece
Q 025252          240 TSYVGKQ  246 (255)
Q Consensus       240 ~~~~~G~  246 (255)
                      .....++
T Consensus       252 ~~~~~~~  258 (272)
T 4dyv_A          252 LDANVQF  258 (272)
T ss_dssp             TTSCCCE
T ss_pred             CcCccce
Confidence            4443333

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.6e-40  Score=273.92  Aligned_cols=217  Identities=24%  Similarity=0.291  Sum_probs=184.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++|+++||||++|||++++++|+++|++|+++ +|+.+..++..+++.  ..++.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            689999999999999999999999999999886 666666666555543  35788899999999999999999887664


Q ss_pred             ------CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252          101 ------KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus       101 ------~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                            ++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|+  +.++||++||..    ...+.
T Consensus        85 ~~~~~~~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~~iv~isS~~----~~~~~  155 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGP---GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR--DNSRIINISSAA----TRISL  155 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEE--EEEEEEEECCGG----GTSCC
T ss_pred             ccccCCcccEEEECCCCCC---CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhC--CCCEEEEeCChh----hccCC
Confidence                  4999999988654   24567789999999999999999999999999983  457999999543    33333


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~  230 (255)
                      +..   ..|++||++++++++.++.|++++||+||+|+| |.++|+                      ++  |+|+++++
T Consensus       156 ~~~---~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  231 (255)
T 3icc_A          156 PDF---IAYSMTKGAINTMTFTLAKQLGARGITVNAILP-GFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTA  231 (255)
T ss_dssp             TTB---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHH
T ss_pred             CCc---chhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEE-eeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHH
Confidence            333   679999999999999999999999999999999 877775                      11  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      .||  +++.+.++||+++.+|||+.
T Consensus       232 ~~l--~s~~~~~~tG~~i~vdgG~~  254 (255)
T 3icc_A          232 AFL--ASPDSRWVTGQLIDVSGGSC  254 (255)
T ss_dssp             HHH--HSGGGTTCCSCEEEESSSTT
T ss_pred             HHH--hCcccCCccCCEEEecCCee
Confidence            999  89999999999999999974

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-39  Score=271.02  Aligned_cols=231  Identities=22%  Similarity=0.301  Sum_probs=190.2

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ...+++++|+++||||++|||++++++|+++|++|++++|+.+...+..+++.   ..++.++.+|++|+++++++++++
T Consensus         7 ~~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   86 (265)
T 1h5q_A            7 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   86 (265)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHH
Confidence            34467899999999999999999999999999999999997655444333321   247889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccC
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~  174 (255)
                      .+.++++|++|||||....   .++.+.+.++|++++++|+.++++++++++|.|.+++ .++||++||..+........
T Consensus        87 ~~~~~~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  163 (265)
T 1h5q_A           87 DADLGPISGLIANAGVSVV---KPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSL  163 (265)
T ss_dssp             HHHSCSEEEEEECCCCCCC---SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEET
T ss_pred             HHhcCCCCEEEECCCcCCC---CchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccc
Confidence            9999999999999876542   4556778999999999999999999999999997655 48999999654322111111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALY  232 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~  232 (255)
                      .+..+...|++||++++.+++.++.|++++||+|++|+| +.++|+                    ++  |+|++.++.+
T Consensus       164 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  242 (265)
T 1h5q_A          164 NGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSP-GYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAIL  242 (265)
T ss_dssp             TEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEec-CccccccccccchhHHHHHHhcCcccCCCCHHHHHHHHHh
Confidence            112234679999999999999999999999999999999 766664                    11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  +++.+.+++|+++.+|||+.
T Consensus       243 l--~~~~~~~~~G~~~~v~gG~~  263 (265)
T 1h5q_A          243 L--LSDHATYMTGGEYFIDGGQL  263 (265)
T ss_dssp             H--HSGGGTTCCSCEEEECTTGG
T ss_pred             h--ccCchhcCcCcEEEecCCEe
Confidence            9  88888899999999999973

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=6.1e-40  Score=275.30  Aligned_cols=218  Identities=29%  Similarity=0.358  Sum_probs=181.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---C--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---G--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++..+++.+++   .  ..++.++.+|++|+++++++++++.+.
T Consensus         4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (278)
T 1spx_A            4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGK   83 (278)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHH
Confidence            67899999999999999999999999999999999988777776665   3  246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCC----ChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDT----PKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +|++|++|||||....   .++.+.    +.++|++++++|+.++++++++++|.|++++ ++||++||..+.   ..+.
T Consensus        84 ~g~id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~---~~~~  156 (278)
T 1spx_A           84 FGKLDILVNNAGAAIP---DSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG---LHAT  156 (278)
T ss_dssp             HSCCCEEEECCC----------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS---SSCC
T ss_pred             cCCCCEEEECCCCCCC---cccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc---ccCC
Confidence            9999999999876542   344555    8999999999999999999999999997655 999999965431   1222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--H
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--I  223 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~  223 (255)
                      ++   ...|++||++++++++.++.|++++||+||+|+| +.+.|+                             ++  |
T Consensus       157 ~~---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  232 (278)
T 1spx_A          157 PD---FPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISP-GLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQP  232 (278)
T ss_dssp             TT---SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCCCC--------------HHHHHHHHHHCTTSSCBCH
T ss_pred             CC---ccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEec-CcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCH
Confidence            22   2679999999999999999999999999999999 655442                             11  8


Q ss_pred             HhhhhhhhhhhccCCCCCe-eeceeEEecCCc
Q 025252          224 ASIANAALYNMAKDDDTSY-VGKQNLLVNGGF  254 (255)
Q Consensus       224 ~~~~~~~~~l~~~~~~~~~-~~G~~i~~dgG~  254 (255)
                      +|++.+++++  +++...+ +||+++.+|||+
T Consensus       233 ~dvA~~v~~l--~s~~~~~~~tG~~~~vdgG~  262 (278)
T 1spx_A          233 QDIAEVIAFL--ADRKTSSYIIGHQLVVDGGS  262 (278)
T ss_dssp             HHHHHHHHHH--HCHHHHTTCCSCEEEESTTG
T ss_pred             HHHHHHHHHH--cCccccCcccCcEEEECCCc
Confidence            9999999999  7777776 999999999996

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=7e-40  Score=270.03  Aligned_cols=207  Identities=21%  Similarity=0.315  Sum_probs=177.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .++|+++||||++|||++++++|++ .|++|++.+|+++..        ...+.++.+|++|+++++++++.+ + ++++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~--------~~~~~~~~~Dv~~~~~v~~~~~~~-~-~~~i   71 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS--------AENLKFIKADLTKQQDITNVLDII-K-NVSF   71 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC--------CTTEEEEECCTTCHHHHHHHHHHT-T-TCCE
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc--------cccceEEecCcCCHHHHHHHHHHH-H-hCCC
Confidence            3689999999999999999999999 789999999886521        246789999999999999999655 3 6799


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||....   .++.+.+.++|++++++|+.++++++++++|.|+++  ++||++||..    ...+.++.   ..
T Consensus        72 d~lv~nAg~~~~---~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--g~iv~~sS~~----~~~~~~~~---~~  139 (244)
T 4e4y_A           72 DGIFLNAGILIK---GSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVG--ASIVFNGSDQ----CFIAKPNS---FA  139 (244)
T ss_dssp             EEEEECCCCCCC---BCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEE--EEEEEECCGG----GTCCCTTB---HH
T ss_pred             CEEEECCccCCC---CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccC--cEEEEECCHH----HccCCCCC---ch
Confidence            999999886542   567788999999999999999999999999999654  8999999543    33333333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-------------------------------h--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-------------------------------A--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-------------------------------~--~~~~~~~  229 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+.                               +  |+|++.+
T Consensus       140 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  218 (244)
T 4e4y_A          140 YTLSKGAIAQMTKSLALDLAKYQIRVNTVCP-GTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAEL  218 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-SCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCeEEEEEec-CccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999 7776651                               1  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++|  +++.+.++||+++.+|||+.
T Consensus       219 v~~l--~s~~~~~itG~~i~vdGG~~  242 (244)
T 4e4y_A          219 VIFL--LSDKSKFMTGGLIPIDGGYT  242 (244)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHH--hcCccccccCCeEeECCCcc
Confidence            9999  89999999999999999984

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=2.2e-39  Score=272.94  Aligned_cols=223  Identities=23%  Similarity=0.359  Sum_probs=191.7

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+
T Consensus        38 ~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  117 (285)
T 2c07_A           38 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT  117 (285)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999998877776666553  24688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..    ...+.++.
T Consensus       118 ~~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~----~~~~~~~~  190 (285)
T 2c07_A          118 EHKNVDILVNNAGITR---DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIV----GLTGNVGQ  190 (285)
T ss_dssp             HCSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTH----HHHCCTTC
T ss_pred             hcCCCCEEEECCCCCC---CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChh----hccCCCCC
Confidence            9999999999987654   2456778999999999999999999999999999877779999999543    22222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~  235 (255)
                         ..|++||++++.+++.++.|+++.||+|++|+| +.++|+                    ++  |+|+++++.++  
T Consensus       191 ---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--  264 (285)
T 2c07_A          191 ---ANYSSSKAGVIGFTKSLAKELASRNITVNAIAP-GFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFL--  264 (285)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--
T ss_pred             ---chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEe-CcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHHHH--
Confidence               679999999999999999999999999999999 766654                    11  79999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.+++|+++.+|||+.
T Consensus       265 ~~~~~~~~~G~~i~v~gG~~  284 (285)
T 2c07_A          265 SSDKSGYINGRVFVIDGGLS  284 (285)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             hCCCcCCCCCCEEEeCCCcc
Confidence            88888899999999999974

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=5.3e-39  Score=265.22  Aligned_cols=221  Identities=26%  Similarity=0.377  Sum_probs=188.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh-C--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-G--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~-~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++ .  ..++.++.+|++|+++++++++++.+.+++
T Consensus         1 ~~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (250)
T 2cfc_A            1 MSRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA   80 (250)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            3689999999999999999999999999999999988777776665 2  246889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||.........+.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++   ..
T Consensus        81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~---~~  153 (250)
T 2cfc_A           81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVAS----LVAFPG---RS  153 (250)
T ss_dssp             CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTT---CH
T ss_pred             CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhh----ccCCCC---ch
Confidence            99999998765432212266778999999999999999999999999998777899999995432    222222   36


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAKD  237 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~~  237 (255)
                      .|++||++++.+++.++.|++++||+|++++| +.+.|+                   +   +  |+|+++.+.++  ++
T Consensus       154 ~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~  230 (250)
T 2cfc_A          154 AYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCP-GMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFL--AG  230 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHH--HS
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-CcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--cC
Confidence            79999999999999999999999999999999 655443                   1   1  79999999999  88


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +...+++|+++.+|||++
T Consensus       231 ~~~~~~~G~~~~v~gG~~  248 (250)
T 2cfc_A          231 EDATYVNGAALVMDGAYT  248 (250)
T ss_dssp             TTCTTCCSCEEEESTTGG
T ss_pred             chhhcccCCEEEECCcee
Confidence            888999999999999974

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=7.1e-40  Score=301.11  Aligned_cols=217  Identities=24%  Similarity=0.356  Sum_probs=181.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---------chHHHHHHHhCCCceEEEEeeCCCHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---------NLGQALADKLGHQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      +++++|+++||||++|||++++++|+++|++|++.+|+.         +.++++.+++...... ..+|++|.+++++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~-~~~d~~d~~~~~~~v   82 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV-AVADYNNVLDGDKIV   82 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE-EEEECCCTTCHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe-EEEEcCCHHHHHHHH
Confidence            468899999999999999999999999999999998764         4555555554321112 236888888899999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +++.+.+|+||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+|||+||    ..+..
T Consensus        83 ~~~~~~~G~iDiLVnNAGi~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS----~ag~~  155 (604)
T 2et6_A           83 ETAVKNFGTVHVIINNAGILR---DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSS----PAGLY  155 (604)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----HHHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC----HHHcC
Confidence            999999999999999998654   25677889999999999999999999999999998888899999994    44444


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------H----h-HHhhhhhhhhhhccCCC
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------E----A-IASIANAALYNMAKDDD  239 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------~----~-~~~~~~~~~~l~~~~~~  239 (255)
                      +.++.   ..|++||+|+.+|+++|+.|++++|||||+|+| + ++|+        +    + |++++..+.||  +++.
T Consensus       156 ~~~~~---~~Y~asKaal~~lt~~la~El~~~gIrVn~v~P-g-~~T~m~~~~~~~~~~~~~~pe~vA~~v~~L--~s~~  228 (604)
T 2et6_A          156 GNFGQ---ANYASAKSALLGFAETLAKEGAKYNIKANAIAP-L-ARSRMTESIMPPPMLEKLGPEKVAPLVLYL--SSAE  228 (604)
T ss_dssp             CCTTB---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-C-CCCHHHHTTSCHHHHTTCSHHHHHHHHHHH--TSSS
T ss_pred             CCCCc---hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEcc-C-CcCccccccCChhhhccCCHHHHHHHHHHH--hCCc
Confidence            43333   679999999999999999999999999999999 4 3432        1    1 89999999999  8888


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                       +++||+++.+|||+
T Consensus       229 -~~itG~~~~vdgG~  242 (604)
T 2et6_A          229 -NELTGQFFEVAAGF  242 (604)
T ss_dssp             -CCCCSCEEEEETTE
T ss_pred             -ccCCCCEEEECCCe
Confidence             99999999999996

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=1.8e-39  Score=272.24  Aligned_cols=217  Identities=22%  Similarity=0.286  Sum_probs=183.2

Q ss_pred             ecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||+  +|||++++++|+++|++|++++|+++   ..+++.++.+  .+.++.+|++|+++++++++++.+.
T Consensus         4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN--SPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            678999999999  99999999999999999999999876   2333333322  4788999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++|||||...... ..++.+.+.++|++++++|+.++++++++++|.|++  +|+||++||..+    ..+.++.
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~----~~~~~~~  155 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN--GASVLTLSYLGS----TKYMAHY  155 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGG----TSBCTTC
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEecchh----cCCCCCc
Confidence            999999999988654210 135567899999999999999999999999999964  489999995432    2232222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l  233 (255)
                         ..|++||++++++++.++.|++++||+||+|+| +.++|+                   +   +  |+|++..++++
T Consensus       156 ---~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l  231 (275)
T 2pd4_A          156 ---NVMGLAKAALESAVRYLAVDLGKHHIRVNALSA-GPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYL  231 (275)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH
T ss_pred             ---hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHH
Confidence               679999999999999999999999999999999 766654                   1   1  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++...+++|+++.+|||+
T Consensus       232 --~s~~~~~~tG~~~~vdgg~  250 (275)
T 2pd4_A          232 --LSSLSSGVSGEVHFVDAGY  250 (275)
T ss_dssp             --HSGGGTTCCSCEEEESTTG
T ss_pred             --hCccccCCCCCEEEECCCc
Confidence              8888899999999999997

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.7e-39  Score=271.99  Aligned_cols=217  Identities=27%  Similarity=0.353  Sum_probs=179.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.   ...+.++++|++|+++++++++++.+.
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999887777666553   233588999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +|++|+||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++  .|+||++||..    +..+.++
T Consensus       109 ~g~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~----~~~~~~~  182 (281)
T 4dry_A          109 FARLDLLVNNAGSNVP--PVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSIS----AQTPRPN  182 (281)
T ss_dssp             HSCCSEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGG----GTCCCTT
T ss_pred             cCCCCEEEECCCCCCC--CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHH----hCCCCCC
Confidence            9999999999886532  24677889999999999999999999999999998765  68999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhc
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~  235 (255)
                      .   ..|++||+|++++++.++.|++++|||||+|+| |.++|+                   ++  |+|++++++||  
T Consensus       183 ~---~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~fL--  256 (281)
T 4dry_A          183 S---APYTATKHAITGLTKSTALDGRMHDIACGQIDI-GNAATDMTARMSTGVLQANGEVAAEPTIPIEHIAEAVVYM--  256 (281)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-ECBCC-------CEEECTTSCEEECCCBCHHHHHHHHHHH--
T ss_pred             C---hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEE-CcCcChhhhhhcchhhhhhhcccccCCCCHHHHHHHHHHH--
Confidence            3   779999999999999999999999999999999 888775                   12  89999999999  


Q ss_pred             cC-CCCCeeeceeEEe
Q 025252          236 KD-DDTSYVGKQNLLV  250 (255)
Q Consensus       236 ~~-~~~~~~~G~~i~~  250 (255)
                      ++ +....+++.++.-
T Consensus       257 ~s~~~~~~i~~~~i~p  272 (281)
T 4dry_A          257 ASLPLSANVLTMTVMA  272 (281)
T ss_dssp             HHSCTTEEEEEEEEEE
T ss_pred             hCCCccCccccEEEEe
Confidence            66 4555666666543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=3.1e-39  Score=269.51  Aligned_cols=215  Identities=17%  Similarity=0.236  Sum_probs=184.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+.+++.    ...++.++.+|++|+++++++++++.+.+|+
T Consensus        12 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~----~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   87 (266)
T 3p19_A           12 RGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL----NLPNTLCAQVDVTDKYTFDTAITRAEKIYGP   87 (266)
T ss_dssp             ---CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT----CCTTEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh----hcCCceEEEecCCCHHHHHHHHHHHHHHCCC
Confidence            457899999999999999999999999999999999987655432    2347889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    +..+.++.   .
T Consensus        88 iD~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~----~~~~~~~~---~  157 (266)
T 3p19_A           88 ADAIVNNAGMML---LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIA----GKKTFPDH---A  157 (266)
T ss_dssp             EEEEEECCCCCC---CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG----GTSCCTTC---H
T ss_pred             CCEEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChh----hCCCCCCC---c
Confidence            999999988654   3567788999999999999999999999999999888889999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAKD  237 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~~  237 (255)
                      .|++||++++++++.++.|++++|||||+|+| |.++|+                   +   +  |+|++.+++|+  ++
T Consensus       158 ~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l--~~  234 (266)
T 3p19_A          158 AYCGTKFAVHAISENVREEVAASNVRVMTIAP-SAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFA--YQ  234 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHH--HH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCcEEEEEee-CccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHH--Hc
Confidence            79999999999999999999999999999999 777764                   1   1  89999999999  88


Q ss_pred             CCCCeeeceeEEecCC
Q 025252          238 DDTSYVGKQNLLVNGG  253 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG  253 (255)
                      +....++++.+....+
T Consensus       235 ~~~~~~~~~i~i~p~~  250 (266)
T 3p19_A          235 QPQNVCIREIALAPTK  250 (266)
T ss_dssp             SCTTEEEEEEEEEETT
T ss_pred             CCCCccceeeEEecCC
Confidence            8888899988776654

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=8.9e-39  Score=267.85  Aligned_cols=226  Identities=46%  Similarity=0.764  Sum_probs=192.0

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +..+++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.. .++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   88 (278)
T 2bgk_A            9 SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIA   88 (278)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            334568999999999999999999999999999999999998777777666643 3788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .++++|++||||+..... ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||....    .+.+  
T Consensus        89 ~~~~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~----~~~~--  161 (278)
T 2bgk_A           89 KHGKLDIMFGNVGVLSTT-PYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSF----TAGE--  161 (278)
T ss_dssp             HHSCCCEEEECCCCCCSS-CSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGT----CCCT--
T ss_pred             HcCCCCEEEECCcccCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeecccc----CCCC--
Confidence            999999999998765321 245677899999999999999999999999999988788999999955432    2222  


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IASIANAA  230 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~  230 (255)
                      .+...|++||++++.+++.++.|++++||+|++|+| +.+.|+                         ++  |+|+++++
T Consensus       162 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~  240 (278)
T 2bgk_A          162 GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSP-YIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAV  240 (278)
T ss_dssp             TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-ceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHH
Confidence            122679999999999999999999999999999999 655443                         02  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .++  +++...+++|+++.+|||+
T Consensus       241 ~~l--~~~~~~~~~G~~~~v~gg~  262 (278)
T 2bgk_A          241 AYL--AGDESKYVSGLNLVIDGGY  262 (278)
T ss_dssp             HHH--HSGGGTTCCSCEEEESTTG
T ss_pred             HHH--cCcccccCCCCEEEECCcc
Confidence            999  8888889999999999996

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=2.6e-39  Score=269.77  Aligned_cols=218  Identities=21%  Similarity=0.280  Sum_probs=181.3

Q ss_pred             ecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        24 ~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++|+++||||+  +|||++++++|+++|++|++++|++.   ..+++.++.+  ...++++|++|+++++++++++.+.
T Consensus         7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~   84 (265)
T 1qsg_A            7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLG--SDIVLQCDVAEDASIDTMFAELGKV   84 (265)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTT--CCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcC--CcEEEEccCCCHHHHHHHHHHHHHH
Confidence            678999999999  99999999999999999999999872   2333333322  3478999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccC-ccCCCC-CChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRG-FVSILD-TPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +|++|+||||||...... ..++.+ .+.++|++++++|+.++++++++++|.|++  .|+||++||..+    ..+.++
T Consensus        85 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~~----~~~~~~  158 (265)
T 1qsg_A           85 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP--GSALLTLSYLGA----ERAIPN  158 (265)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEEECGGG----TSBCTT
T ss_pred             cCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEEcchhh----ccCCCC
Confidence            999999999987653210 134455 789999999999999999999999999963  589999995432    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~  232 (255)
                      .   ..|++||++++.+++.++.|++++||+||+|+| +.++|+                   +   +  |+|++.++++
T Consensus       159 ~---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~  234 (265)
T 1qsg_A          159 Y---NVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAF  234 (265)
T ss_dssp             T---THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHH
T ss_pred             c---hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-CCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            2   679999999999999999999999999999999 766553                   1   1  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCCcC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  +++.+.++||+++.+|||++
T Consensus       235 l--~s~~~~~~tG~~~~vdgG~~  255 (265)
T 1qsg_A          235 L--CSDLSAGISGEVVHVDGGFS  255 (265)
T ss_dssp             H--TSGGGTTCCSCEEEESTTGG
T ss_pred             H--hCchhcCccCCEEEECCCcC
Confidence            9  88889999999999999973

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=1e-38  Score=263.72  Aligned_cols=220  Identities=28%  Similarity=0.405  Sum_probs=190.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.. .++.++.+|++|+++++++++++.+.+++
T Consensus         3 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (251)
T 1zk4_A            3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999998877777666643 47889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++||||+...   ..++.+.+.++|++++++|+.+++++++.++|.|++++. ++||++||...    ..+.++   .
T Consensus        83 id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~----~~~~~~---~  152 (251)
T 1zk4_A           83 VSTLVNNAGIAV---NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG----FVGDPS---L  152 (251)
T ss_dssp             CCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG----TSCCTT---C
T ss_pred             CCEEEECCCCCC---CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchh----ccCCCC---C
Confidence            999999987653   245677899999999999999999999999999987766 89999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhhhc
Q 025252          181 NYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l~~  235 (255)
                      ..|++||++++.+++.++.|+.  ++||+|++|+| +.+.|+                  +   +  |+|++.++.++  
T Consensus       153 ~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  229 (251)
T 1zk4_A          153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP-GYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL--  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEE-CCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH--
T ss_pred             ccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEee-CcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHHHHHHHH--
Confidence            6799999999999999999998  88999999999 666554                  1   1  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++...+++|+++.+|||+.
T Consensus       230 ~~~~~~~~~G~~~~v~gG~~  249 (251)
T 1zk4_A          230 ASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             cCcccccccCcEEEECCCcc
Confidence            88888899999999999974

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.4e-39  Score=271.00  Aligned_cols=219  Identities=18%  Similarity=0.182  Sum_probs=185.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+|+ |+++||||++|||++++++|+++|++|++++|+++.++++.+++.. .++.++.+|++|+++++++++++.+.+|
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   96 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFA   96 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGS
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            4567 9999999999999999999999999999999998888877777653 4788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-cEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|+||||||....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.| +||++||..    ...+.++.  
T Consensus        97 ~iD~lvnnAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~----~~~~~~~~--  168 (272)
T 2nwq_A           97 TLRGLINNAGLALG--TDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVA----GKWPYPGS--  168 (272)
T ss_dssp             SCCEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGG----GTSCCTTC--
T ss_pred             CCCEEEECCCCCCC--CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCch----hccCCCCC--
Confidence            99999999876431  1456778999999999999999999999999999877778 999999543    23233222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh-HHhhhhhhhhhhccC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA-IASIANAALYNMAKD  237 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~-~~~~~~~~~~l~~~~  237 (255)
                       ..|++||++++++++.++.|++++|||||+|+| +.++|+                     +. |+|++..++++  ++
T Consensus       169 -~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l--~s  244 (272)
T 2nwq_A          169 -HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEP-GLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFWI--MN  244 (272)
T ss_dssp             -HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEE-CSBC--------------------CCCCBCHHHHHHHHHHH--HT
T ss_pred             -chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEc-CCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHHH--hC
Confidence             679999999999999999999999999999999 666543                     01 89999999999  76


Q ss_pred             CCCCeeeceeEEecCCc
Q 025252          238 DDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~  254 (255)
                      + ..+++|+.+.+|+|.
T Consensus       245 ~-~~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          245 Q-PAHLNINSLEIMPVS  260 (272)
T ss_dssp             S-CTTEEEEEEEEEETT
T ss_pred             C-CccCccceEEEeecc
Confidence            5 568999999999984

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=6.2e-39  Score=262.76  Aligned_cols=215  Identities=20%  Similarity=0.226  Sum_probs=183.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.   ..++.++++|++|+++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999999999887777665542   357889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|+ ++.++++++||..    ...+.+..   .
T Consensus        81 id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~~ii~~sS~~----~~~~~~~~---~  149 (235)
T 3l77_A           81 VDVVVANAGLGY---FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLK-RTGGLALVTTSDV----SARLIPYG---G  149 (235)
T ss_dssp             CSEEEECCCCCC---CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEECCGG----GSSCCTTC---H
T ss_pred             CCEEEECCcccc---ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCcEEEEecch----hcccCCCc---c
Confidence            999999988654   35677889999999999999999999999999994 4567788777432    22222222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccCCCCCeeecee
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      .|++||++++++++.+  ++...|||||+|+| |.++|+            ++  |+|+++++.++  +++...+++|+.
T Consensus       150 ~Y~~sKaa~~~~~~~l--~~~~~~i~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~p~dva~~v~~l--~~~~~~~~~~~~  224 (235)
T 3l77_A          150 GYVSTKWAARALVRTF--QIENPDVRFFELRP-GAVDTYFGGSKPGKPKEKGYLKPDEIAEAVRCL--LKLPKDVRVEEL  224 (235)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHCTTSEEEEEEE-CSBSSSTTTCCSCCCGGGTCBCHHHHHHHHHHH--HTSCTTCCCCEE
T ss_pred             hHHHHHHHHHHHHHHH--hhcCCCeEEEEEeC-CccccccccccCCcccccCCCCHHHHHHHHHHH--HcCCCCCccceE
Confidence            7999999999999999  44577999999999 888875            11  99999999999  899999999999


Q ss_pred             EEecCCcC
Q 025252          248 LLVNGGFR  255 (255)
Q Consensus       248 i~~dgG~~  255 (255)
                      +..|+|.+
T Consensus       225 ~~~~~~~~  232 (235)
T 3l77_A          225 MLRSVYQR  232 (235)
T ss_dssp             EECCTTSC
T ss_pred             EEeecccC
Confidence            99999974

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=3.1e-40  Score=283.62  Aligned_cols=218  Identities=19%  Similarity=0.232  Sum_probs=179.6

Q ss_pred             cCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCc---------chHHHHHHHhCC-----CceEEEEeeCCCH--H
Q 025252           25 QGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQD---------NLGQALADKLGH-----QDVCYIHCDVSNE--R   86 (255)
Q Consensus        25 ~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~-----~~~~~~~~D~~~~--~   86 (255)
                      ++|+++|||+++  |||+++|++|+++|++|+++++++         +..+...+....     ..+.++.+|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            478999999985  999999999999999999777654         222222222111     2467888999888  7


Q ss_pred             ------------------HHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 025252           87 ------------------EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus        87 ------------------~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                                        +++++++++.+++|++|+||||||.... ...++.+.+.++|++++++|+.++++++++++|
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p  159 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKE-VQKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTT-TTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCccccc-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence                              9999999999999999999999886421 125677889999999999999999999999999


Q ss_pred             HhcCCCCCcEEEeccCCCcccccccCcCCCCCc-ccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhhH-----
Q 025252          149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMAE-----  221 (255)
Q Consensus       149 ~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~-~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~~-----  221 (255)
                      +|+++  |+||++||..    +..+.+..   . .|++||+|+++|+++|+.|+++ +||+||+|+| |.++|+.     
T Consensus       160 ~m~~~--g~Iv~isS~~----~~~~~~~~---~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~P-G~v~T~~~~~~~  229 (329)
T 3lt0_A          160 IMKPQ--SSIISLTYHA----SQKVVPGY---GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA-GPLKSRAATAIN  229 (329)
T ss_dssp             GEEEE--EEEEEEECGG----GTSCCTTC---TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCCCCHHHHTCC
T ss_pred             HHhhC--CeEEEEeCcc----ccCCCCcc---hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEec-ceeechhHhhhh
Confidence            99764  8999999543    33333332   3 6999999999999999999998 8999999999 7766541     


Q ss_pred             ------------------------------------------------------------h--HHhhhhhhhhhhccCCC
Q 025252          222 ------------------------------------------------------------A--IASIANAALYNMAKDDD  239 (255)
Q Consensus       222 ------------------------------------------------------------~--~~~~~~~~~~l~~~~~~  239 (255)
                                                                                  +  |+|++.+++||  +++.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL--~s~~  307 (329)
T 3lt0_A          230 KLNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFL--LSRE  307 (329)
T ss_dssp             ------------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHH--HSGG
T ss_pred             hhcccccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHH--hCch
Confidence                                                                        1  89999999999  9999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.++||++|.+|||++
T Consensus       308 a~~itG~~i~vdGG~~  323 (329)
T 3lt0_A          308 SRAITGQTIYVDNGLN  323 (329)
T ss_dssp             GTTCCSCEEEESTTGG
T ss_pred             hccccCcEEEEcCCee
Confidence            9999999999999984

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.4e-39  Score=266.68  Aligned_cols=218  Identities=24%  Similarity=0.277  Sum_probs=183.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH-cC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK-FG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g  100 (255)
                      |++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+. +|
T Consensus         3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g   82 (260)
T 2qq5_A            3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQG   82 (260)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            678999999999999999999999999999999999877766665542  246889999999999999999999886 89


Q ss_pred             CccEEEEcCCCccc----cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252          101 KLDILVNSGCNLEY----RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus       101 ~id~li~~a~~~~~----~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|+||||||....    ....++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..+..    +   
T Consensus        83 ~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----~---  155 (260)
T 2qq5_A           83 RLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQ----Y---  155 (260)
T ss_dssp             CCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTS----C---
T ss_pred             CceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcC----C---
Confidence            99999999842111    012456678889999999999999999999999999887789999999654321    1   


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh-----HHhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA-----IASIANA  229 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~-----~~~~~~~  229 (255)
                       .+...|++||++++++++.++.|++++||+||+|+| |.++|+                      ++     |+|++.+
T Consensus       156 -~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~  233 (260)
T 2qq5_A          156 -MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWP-GIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKC  233 (260)
T ss_dssp             -CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC-CCSCTTTC----------------------CHHHHHHHHHHH
T ss_pred             -CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEec-CccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHH
Confidence             123679999999999999999999999999999999 666553                      01     8999999


Q ss_pred             hhhhhccCCCC-CeeeceeEEecC
Q 025252          230 ALYNMAKDDDT-SYVGKQNLLVNG  252 (255)
Q Consensus       230 ~~~l~~~~~~~-~~~~G~~i~~dg  252 (255)
                      ++||  +++.+ .++||+++.+|+
T Consensus       234 v~~l--~s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          234 VVAL--ATDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             HHHH--HTCTTGGGGTTCEEEHHH
T ss_pred             HHHH--hcCcccccccceeechhh
Confidence            9999  88876 499999999875

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=5.4e-39  Score=267.71  Aligned_cols=220  Identities=23%  Similarity=0.324  Sum_probs=182.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..+++.  ..++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            56889999999999999999999999999999999999877766655542  2468889999999999999999999998


Q ss_pred             -CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 -GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 -g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       +++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++.++||++||..+.    .+.+.  
T Consensus        90 ~~~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~----~~~~~--  160 (266)
T 1xq1_A           90 GGKLDILINNLGAIR---SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV----VSASV--  160 (266)
T ss_dssp             TTCCSEEEEECCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------------
T ss_pred             CCCCcEEEECCCCCC---CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhc----cCCCC--
Confidence             89999999987653   245667899999999999999999999999999987778999999965432    22222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~  235 (255)
                       ...|++||++++.+++.++.|++++||+|++|+| +.+.|+                     ++  |+|+++.+.++  
T Consensus       161 -~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  236 (266)
T 1xq1_A          161 -GSIYSATKGALNQLARNLACEWASDGIRANAVAP-AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFL--  236 (266)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC-CSCC-------------------------CCGGGGHHHHHHH--
T ss_pred             -CchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEee-CCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence             2679999999999999999999999999999999 666554                     12  79999999999  


Q ss_pred             cCCCCCeeeceeEEecCCc
Q 025252          236 KDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++.+.+++|+++.+|||+
T Consensus       237 ~~~~~~~~~G~~~~v~gG~  255 (266)
T 1xq1_A          237 CMPAASYITGQTICVDGGL  255 (266)
T ss_dssp             TSGGGTTCCSCEEECCCCE
T ss_pred             cCccccCccCcEEEEcCCc
Confidence            8888899999999999996

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=1.6e-38  Score=264.49  Aligned_cols=221  Identities=28%  Similarity=0.400  Sum_probs=187.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..++..++++ .++.++.+|++|+++++++++++.+.+++
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGR   86 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            56899999999999999999999999999999999999888887777764 57899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccC---CCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEeccCCCcccccc
Q 025252          102 LDILVNSGCNLEYRGFVS---ILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEI  172 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~is~~~~~~~~~~  172 (255)
                      +|++|||||.........   ..+.+.++|++++++|+.+++++++.++|.|+++      +.++||++||..    ...
T Consensus        87 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~----~~~  162 (265)
T 2o23_A           87 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVA----AFE  162 (265)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTH----HHH
T ss_pred             CCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChh----hcC
Confidence            999999987654221110   0136889999999999999999999999999877      678999999543    222


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANA  229 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~  229 (255)
                      +.++   ...|++||++++.+++.++.|++++||+||+|+| +.++|+                     ++  |+|+++.
T Consensus       163 ~~~~---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  238 (265)
T 2o23_A          163 GQVG---QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP-GLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHL  238 (265)
T ss_dssp             CCTT---CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCC----------CHHHHTCSSSCSCBCHHHHHHH
T ss_pred             CCCC---CchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-ccccCccccccCHHHHHHHHHcCCCcCCCCCHHHHHHH
Confidence            2222   2679999999999999999999999999999999 766654                     11  7999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++  ++  +.+++|+++.+|||++
T Consensus       239 ~~~l--~~--~~~~~G~~i~vdgG~~  260 (265)
T 2o23_A          239 VQAI--IE--NPFLNGEVIRLDGAIR  260 (265)
T ss_dssp             HHHH--HH--CTTCCSCEEEESTTCC
T ss_pred             HHHH--hh--cCccCceEEEECCCEe
Confidence            9999  53  4689999999999974

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=1e-38  Score=265.29  Aligned_cols=220  Identities=28%  Similarity=0.427  Sum_probs=187.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||++|||++++++|+++|++|++++| +++..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (261)
T 1gee_A            4 DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF   83 (261)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            478999999999999999999999999999999999 6666665555442  2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +++|++||||+....   .++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..    ...+.+   
T Consensus        84 g~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~----~~~~~~---  153 (261)
T 1gee_A           84 GKLDVMINNAGLENP---VSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVH----EKIPWP---  153 (261)
T ss_dssp             SCCCEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGG----GTSCCT---
T ss_pred             CCCCEEEECCCCCCC---CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHH----hcCCCC---
Confidence            999999999876542   4556778999999999999999999999999998766 78999999543    222222   


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~  234 (255)
                      +...|++||++++.+++.++.|++++||+|++++| +.+.|+                   +   +  |+|+++++.++ 
T Consensus       154 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  231 (261)
T 1gee_A          154 LFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGP-GAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWL-  231 (261)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHH-
T ss_pred             CccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEee-CCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence            23679999999999999999999999999999999 666553                   1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...+++|+++.+|||++
T Consensus       232 -~~~~~~~~~G~~~~v~gg~~  251 (261)
T 1gee_A          232 -ASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hCccccCCCCcEEEEcCCcc
Confidence             88888899999999999973

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=1.9e-38  Score=261.94  Aligned_cols=215  Identities=26%  Similarity=0.370  Sum_probs=183.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++.  ..++.++.+|++|+++++++++++.+.+|
T Consensus         4 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   83 (247)
T 2jah_A            4 ALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG   83 (247)
T ss_dssp             TTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4689999999999999999999999999999999999887777666553  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.|++++ |+||++||..    +..+.++.   
T Consensus        84 ~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~----~~~~~~~~---  152 (247)
T 2jah_A           84 GLDILVNNAGIML---LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIA----GRVNVRNA---  152 (247)
T ss_dssp             CCSEEEECCCCCC---CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGG----GTCCCTTC---
T ss_pred             CCCEEEECCCCCC---CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHH----hcCCCCCC---
Confidence            9999999988653   25667889999999999999999999999999997666 9999999543    23233222   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------H-------h-HHhhhhhhhhhhccC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------E-------A-IASIANAALYNMAKD  237 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~-------~-~~~~~~~~~~l~~~~  237 (255)
                      ..|++||++++++++.++.|++++||+||+|+| +.++|+               .       . |+|++..++++  ++
T Consensus       153 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~l--~s  229 (247)
T 2jah_A          153 AVYQATKFGVNAFSETLRQEVTERGVRVVVIEP-GTTDTELRGHITHTATKEMYEQRISQIRKLQAQDIAEAVRYA--VT  229 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBSSSGGGGCCCHHHHHHHHHHTTTSCCBCHHHHHHHHHHH--HH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEC-CCCCCcchhcccchhhHHHHHhcccccCCCCHHHHHHHHHHH--hC
Confidence            679999999999999999999999999999999 666553               0       2 78999999999  88


Q ss_pred             CCCCeeeceeEEecC
Q 025252          238 DDTSYVGKQNLLVNG  252 (255)
Q Consensus       238 ~~~~~~~G~~i~~dg  252 (255)
                      +...+++++. .+++
T Consensus       230 ~~~~~~~~~i-~i~~  243 (247)
T 2jah_A          230 APHHATVHEI-FIRP  243 (247)
T ss_dssp             SCTTEEEEEE-EEEE
T ss_pred             CCccCccceE-EecC
Confidence            8888888874 5554

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=2.8e-39  Score=266.44  Aligned_cols=213  Identities=16%  Similarity=0.175  Sum_probs=178.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEE-e--cCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIA-D--VQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~--r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+++||||++|||++++++|+++|++|+++ +  |+++..+++.+++ . .     +|+.|+++++++++++.+.+|++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~-~-----~~~~~~~~v~~~~~~~~~~~g~i   73 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-P-G-----TIALAEQKPERLVDATLQHGEAI   73 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-T-T-----EEECCCCCGGGHHHHHGGGSSCE
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-C-C-----CcccCHHHHHHHHHHHHHHcCCC
Confidence            5889999999999999999999999999999 6  9988777777665 1 1     24447788888999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||........++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.+..   ..
T Consensus        74 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~---~~  146 (244)
T 1zmo_A           74 DTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSV----GKKPLAYN---PL  146 (244)
T ss_dssp             EEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGG----GTSCCTTC---TT
T ss_pred             CEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChh----hCCCCCCc---hH
Confidence            999999886542000456788999999999999999999999999999887789999999543    33333333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------H---h--HHhhhhhhhhhhc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~---~--~~~~~~~~~~l~~  235 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+                      +   +  |+|++..++++  
T Consensus       147 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~vA~~v~~l--  223 (244)
T 1zmo_A          147 YGPARAATVALVESAAKTLSRDGILLYAIGP-NFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFL--  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEee-CCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHHHHHHHHHH--
Confidence            9999999999999999999999999999999 654432                      1   1  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++.+.++||+++.+|||++
T Consensus       224 ~s~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          224 ASRRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             HTTTTGGGTTCEEEESTTCC
T ss_pred             cCccccCccCCEEEeCCCCC
Confidence            88999999999999999974

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=1.3e-38  Score=263.55  Aligned_cols=221  Identities=30%  Similarity=0.394  Sum_probs=189.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCce-EEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV-CYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..++..++++ .++ .++.+|++|+++++++++++.+ ++
T Consensus         7 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~-~~   84 (254)
T 2wsb_A            7 FRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-AAVAARIVADVTDAEAMTAAAAEAEA-VA   84 (254)
T ss_dssp             TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEEECCTTCHHHHHHHHHHHHH-HS
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-ccceeEEEEecCCHHHHHHHHHHHHh-hC
Confidence            56889999999999999999999999999999999999887777766663 356 8899999999999999999988 89


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....   .++.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..+..    +. +..|.
T Consensus        85 ~id~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~----~~-~~~~~  156 (254)
T 2wsb_A           85 PVSILVNSAGIARL---HDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTI----VN-RPQFA  156 (254)
T ss_dssp             CCCEEEECCCCCCC---BCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS----CC-SSSCB
T ss_pred             CCcEEEECCccCCC---CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhcc----CC-CCCcc
Confidence            99999999876542   456678899999999999999999999999999887789999999654321    11 11223


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||++++.+++.++.|++++||+|++|+| +.+.|+                   +   +  |+|+++++.++  +
T Consensus       157 ~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  233 (254)
T 2wsb_A          157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAP-GYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFL--A  233 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHH--H
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEe-cccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHH--h
Confidence            679999999999999999999999999999999 666554                   1   1  79999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||+.
T Consensus       234 ~~~~~~~~G~~~~v~gG~~  252 (254)
T 2wsb_A          234 SPAASYVTGAILAVDGGYT  252 (254)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CcccccccCCEEEECCCEe
Confidence            8888899999999999973

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=6.5e-39  Score=264.96  Aligned_cols=213  Identities=21%  Similarity=0.268  Sum_probs=183.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+++. .++.++.+|++|+++++++++++.+.+|++|+||
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   79 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILV   79 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEE
Confidence            679999999999999999999999999999999888887777765 4788999999999999999999988899999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||||...  ...++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..    ...+.++.   ..|++|
T Consensus        80 nnAg~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~----~~~~~~~~---~~Y~as  150 (248)
T 3asu_A           80 NNAGLAL--GMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTA----GSWPYAGG---NVYGAT  150 (248)
T ss_dssp             ECCCCCC--CCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGG----GTSCCTTC---HHHHHH
T ss_pred             ECCCcCC--CCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccch----hccCCCCC---chHHHH
Confidence            9987642  12456678999999999999999999999999999877789999999543    23233222   679999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchh-hh---------------------Hh-HHhhhhhhhhhhccCCCCCee
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-MA---------------------EA-IASIANAALYNMAKDDDTSYV  243 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-t~---------------------~~-~~~~~~~~~~l~~~~~~~~~~  243 (255)
                      |++++++++.++.|++++|||||+|+| +.++ |+                     ++ |+|++..++++  +++ ..++
T Consensus       151 Kaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~l--~s~-~~~~  226 (248)
T 3asu_A          151 KAFVRQFSLNLRTDLHGTAVRVTDIEP-GLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWWV--STL-PAHV  226 (248)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEE-CSBCC----------------------CCBCHHHHHHHHHHH--HHS-CTTC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEec-cccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHHH--hcC-Cccc
Confidence            999999999999999999999999999 6666 43                     01 89999999999  765 5689


Q ss_pred             eceeEEecCC
Q 025252          244 GKQNLLVNGG  253 (255)
Q Consensus       244 ~G~~i~~dgG  253 (255)
                      +|+.+.++++
T Consensus       227 ~g~~i~v~~~  236 (248)
T 3asu_A          227 NINTLEMMPV  236 (248)
T ss_dssp             CCCEEEECCT
T ss_pred             eeeEEEEccc
Confidence            9999999876

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.3e-38  Score=262.90  Aligned_cols=225  Identities=27%  Similarity=0.375  Sum_probs=190.3

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.  ..++.++.+|++|+++++++++++.+.
T Consensus         8 ~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   87 (260)
T 3awd_A            8 KLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQ   87 (260)
T ss_dssp             GGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            356889999999999999999999999999999999999877666555542  246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|++++.++|+++||..+.    .+.+ ..
T Consensus        88 ~~~id~vi~~Ag~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~----~~~~-~~  160 (260)
T 3awd_A           88 EGRVDILVACAGICIS--EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGL----IVNR-PQ  160 (260)
T ss_dssp             HSCCCEEEECCCCCCC--SCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT----SCCS-SS
T ss_pred             cCCCCEEEECCCCCCC--CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhc----ccCC-CC
Confidence            9999999999875431  245667889999999999999999999999999987778999999955332    1111 12


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~  234 (255)
                      |...|++||++++.+++.++.|++++||+|++|+| +.+.|+                   +   +  |+|+++++.++ 
T Consensus       161 ~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  238 (260)
T 3awd_A          161 QQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAP-TYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFL-  238 (260)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHH-
T ss_pred             CccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEe-eeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHH-
Confidence            23679999999999999999999999999999999 655443                   1   1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++...+++|+++.+|||+.
T Consensus       239 -~~~~~~~~~G~~~~v~gg~~  258 (260)
T 3awd_A          239 -ASDAASLMTGAIVNVDAGFT  258 (260)
T ss_dssp             -HSGGGTTCCSCEEEESTTTT
T ss_pred             -hCchhccCCCcEEEECCcee
Confidence             88888899999999999974

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=1.3e-38  Score=264.70  Aligned_cols=216  Identities=16%  Similarity=0.163  Sum_probs=181.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHH---cCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~---~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      +|++|+++||||++|||++++++|++   +|++|++++|+++..+++.+++.    ..++.++.+|++|+++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   89999999999887777666552    346889999999999999999999


Q ss_pred             HH--HcCCcc--EEEEcCCCccccCccCCCC-CChHHHHHHHhhhhhhHHHHHHHHHHHhcCC--CCCcEEEeccCCCcc
Q 025252           96 VA--KFGKLD--ILVNSGCNLEYRGFVSILD-TPKSDLERLLAVNTIGGFLVAKHAARVMVPR--RRGCILYTTGTGTTA  168 (255)
Q Consensus        96 ~~--~~g~id--~li~~a~~~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~--~~~~ii~is~~~~~~  168 (255)
                      .+  .+|++|  +||||||..... ..++.+ .+.++|++++++|+.++++++++++|.|+++  +.|+||++||..   
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~---  158 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDV-SKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLC---  158 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCC-SSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGG---
T ss_pred             HhccccccCCccEEEECCcccCCC-CcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCch---
Confidence            88  678899  999998864321 124555 6899999999999999999999999999876  568999999543   


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh-
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA-  222 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~-  222 (255)
                       ...+.++.   ..|++||++++++++.++.|+++  ||||+|+| |.++|+                         ++ 
T Consensus       159 -~~~~~~~~---~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  231 (259)
T 1oaa_A          159 -ALQPYKGW---GLYCAGKAARDMLYQVLAAEEPS--VRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSDGALV  231 (259)
T ss_dssp             -GTSCCTTC---HHHHHHHHHHHHHHHHHHHHCTT--EEEEEEEC-CSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSB
T ss_pred             -hcCCCCCc---cHHHHHHHHHHHHHHHHHhhCCC--ceEEEecC-CCcCcchHHHHhhccCChhHHHHHHHhhhcCCcC
Confidence             33333323   67999999999999999999974  99999999 766554                         11 


Q ss_pred             -HHhhhhhhhhhhccCCCCCeeeceeEEecC
Q 025252          223 -IASIANAALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       223 -~~~~~~~~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                       |+|++..++++  +++ ..++||+++.+||
T Consensus       232 ~p~dvA~~v~~l--~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          232 DCGTSAQKLLGL--LQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             CHHHHHHHHHHH--HHH-CCSCTTEEEETTC
T ss_pred             CHHHHHHHHHHH--Hhh-ccccCCcEEeccC
Confidence             89999999999  665 6899999999997

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=5.7e-39  Score=264.57  Aligned_cols=220  Identities=27%  Similarity=0.422  Sum_probs=174.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||++|||++++++|+++|++|+++ +|+++..++..+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999999998 667666666555442  3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++||||+...   ..++.+.+.++|++.+++|+.+++++++.++|.|++++.++||++||..+    ..+.++   
T Consensus        82 ~~~d~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~---  151 (247)
T 2hq1_A           82 GRIDILVNNAGITR---DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAG----IIGNAG---  151 (247)
T ss_dssp             SCCCEEEECC------------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC----------------
T ss_pred             CCCCEEEECCCCCC---CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh----ccCCCC---
Confidence            99999999987653   23456678889999999999999999999999998777899999995432    222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccC
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKD  237 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~  237 (255)
                      ...|++||++++.+++.++.|++++||+||+++| +.++|+                 +   +  ++|+++++.++  ++
T Consensus       152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~  228 (247)
T 2hq1_A          152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAP-GIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVVGFL--AS  228 (247)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH--HS
T ss_pred             CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEE-EEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHHHHH--cC
Confidence            2679999999999999999999999999999999 766554                 1   1  89999999999  77


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +...+++|+++.+|||+.
T Consensus       229 ~~~~~~~G~~~~v~gG~~  246 (247)
T 2hq1_A          229 DDSNYITGQVINIDGGLV  246 (247)
T ss_dssp             GGGTTCCSCEEEESTTC-
T ss_pred             cccccccCcEEEeCCCcc
Confidence            888899999999999974

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.9e-38  Score=266.25  Aligned_cols=223  Identities=18%  Similarity=0.309  Sum_probs=187.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46899999999999999999999999999999999999876655554432  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCC-CCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSIL-DTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +++|++|||||....  ..++. +.+.++|++++++|+.+++++++.++|.|++++.++||++||..+.....  .   .
T Consensus       110 g~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~--~---~  182 (279)
T 3ctm_A          110 GTIDVFVANAGVTWT--QGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNI--P---Q  182 (279)
T ss_dssp             SCCSEEEECGGGSTT--C--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC--------C
T ss_pred             CCCCEEEECCccccc--CCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCC--C---C
Confidence            999999999876542  13444 67889999999999999999999999999877789999999654322100  1   1


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~  236 (255)
                      +...|++||++++.+++.++.|++++| +||+|+| +.++|+                 +   +  |+|+++++.++  +
T Consensus       183 ~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l--~  258 (279)
T 3ctm_A          183 LQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISP-GYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVGGYLYL--A  258 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEE-CSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHHHHHHH--H
T ss_pred             CcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEec-cCCccccccccChHHHHHHHHhCCccCCcCHHHHHHHHHHH--h
Confidence            226799999999999999999999999 9999999 766654                 1   1  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||++
T Consensus       259 s~~~~~~tG~~i~vdgG~~  277 (279)
T 3ctm_A          259 SNASTFTTGSDVVIDGGYT  277 (279)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CccccCccCCEEEECCCee
Confidence            8888999999999999974

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=1.8e-38  Score=261.12  Aligned_cols=217  Identities=23%  Similarity=0.383  Sum_probs=184.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+++||||++|||++++++|+++|++|+++ +|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            5889999999999999999999999999994 788776666554442  2468889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||||+....   .++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..    ...+.++.   ..
T Consensus        81 d~li~~Ag~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~----~~~~~~~~---~~  150 (244)
T 1edo_A           81 DVVVNNAGITRD---TLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV----GLIGNIGQ---AN  150 (244)
T ss_dssp             SEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH----HHHCCTTC---HH
T ss_pred             CEEEECCCCCCC---cCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChh----hcCCCCCC---cc
Confidence            999999876542   455677899999999999999999999999999877789999999543    22222222   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc-CCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK-DDD  239 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~-~~~  239 (255)
                      |++||++++.+++.++.|++++||+|++++| +.+.|+                    ++  |+|+++++.++  + ++.
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~  227 (244)
T 1edo_A          151 YAAAKAGVIGFSKTAAREGASRNINVNVVCP-GFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFL--ALSPA  227 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHH--HHCSG
T ss_pred             chhhHHHHHHHHHHHHHHhhhcCCEEEEEee-CccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHHH--hCCCc
Confidence            9999999999999999999999999999999 776664                    11  89999999999  6 677


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      ..+++|+++.+|||++
T Consensus       228 ~~~~~G~~~~v~gG~~  243 (244)
T 1edo_A          228 ASYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGGCCSCEEEESTTTT
T ss_pred             cCCcCCCEEEeCCCcc
Confidence            8899999999999974

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=1.6e-38  Score=261.86  Aligned_cols=221  Identities=26%  Similarity=0.377  Sum_probs=189.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.   ..++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999877666655442   246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++||||+....   .++.+.+.+++++++++|+.+++++++.++|.|++++.++||++||.    ....+.++  
T Consensus        83 ~~~~d~vi~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~----~~~~~~~~--  153 (248)
T 2pnf_A           83 VDGIDILVNNAGITRD---KLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSV----VGFTGNVG--  153 (248)
T ss_dssp             SSCCSEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCH----HHHHCCTT--
T ss_pred             cCCCCEEEECCCCCCC---CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccH----HhcCCCCC--
Confidence            9999999999876542   45567789999999999999999999999999987778999999943    22222222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~  236 (255)
                       ...|++||++++.+++.++.|++++||+|++++| +.+.|+                 +   +  ++|+++++.++  +
T Consensus       154 -~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  229 (248)
T 2pnf_A          154 -QVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAP-GFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVLFL--C  229 (248)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHHHH--H
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-ceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHHHH--h
Confidence             2679999999999999999999999999999999 666554                 1   1  89999999999  7


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||+.
T Consensus       230 ~~~~~~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          230 SELASYITGEVIHVNGGMF  248 (248)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CchhhcCCCcEEEeCCCcC
Confidence            7778899999999999974

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.1e-38  Score=284.39  Aligned_cols=218  Identities=23%  Similarity=0.303  Sum_probs=187.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..+.+|+++||||++|||++++++|+++|++|++++|+..  ...+..++.   .+.++.+|++|.++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999999999998753  233333333   46789999999999999999999999


Q ss_pred             CC-ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 GK-LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~-id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++ +|++|||||....   ..+.+.+.++|++++++|+.+++++.+.+.|.|.+++.++||++||.    ....+.++. 
T Consensus       286 g~~id~lV~nAGv~~~---~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~----a~~~g~~g~-  357 (454)
T 3u0b_A          286 GGKVDILVNNAGITRD---KLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSM----AGIAGNRGQ-  357 (454)
T ss_dssp             TTCCSEEEECCCCCCC---CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCH----HHHHCCTTC-
T ss_pred             CCCceEEEECCcccCC---CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeCh----HhCCCCCCC-
Confidence            76 9999999887642   46678899999999999999999999999999988888999999944    333344333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~  236 (255)
                        ..|++||+++++|++.++.|++++||+||+|+| |.++|+                 +   +  |+|+++++.||  +
T Consensus       358 --~~YaasKaal~~l~~~la~e~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v~fL--~  432 (454)
T 3u0b_A          358 --TNYATTKAGMIGLAEALAPVLADKGITINAVAP-GFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELIAYF--A  432 (454)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CSBCC----------CHHHHHSBTTSSCBCHHHHHHHHHHH--H
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEc-CcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHHHHH--h
Confidence              779999999999999999999999999999999 877775                 1   1  89999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+.++||++|.+|||+.
T Consensus       433 s~~a~~itG~~i~vdGG~~  451 (454)
T 3u0b_A          433 SPASNAVTGNTIRVCGQAM  451 (454)
T ss_dssp             CGGGTTCCSCEEEESSSBS
T ss_pred             CCccCCCCCcEEEECCccc
Confidence            9999999999999999973

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-38  Score=263.57  Aligned_cols=220  Identities=28%  Similarity=0.432  Sum_probs=187.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---------CceEEEEeeCCCHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---------QDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++..         .++.++.+|++|+++++++++
T Consensus         4 ~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   83 (264)
T 2pd6_A            4 RLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLE   83 (264)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHH
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHH
Confidence            47899999999999999999999999999999999998877776655432         467889999999999999999


Q ss_pred             HHHHHcCCc-cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCccccc
Q 025252           94 TTVAKFGKL-DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTE  171 (255)
Q Consensus        94 ~~~~~~g~i-d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~  171 (255)
                      ++.+.+|++ |++||||+...   ..++.+.+.++|++++++|+.++++++++++|.|.+++ .++||++||..    ..
T Consensus        84 ~~~~~~g~i~d~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~----~~  156 (264)
T 2pd6_A           84 QVQACFSRPPSVVVSCAGITQ---DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIV----GK  156 (264)
T ss_dssp             HHHHHHSSCCSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTH----HH
T ss_pred             HHHHHhCCCCeEEEECCCcCC---CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChh----hc
Confidence            999999999 99999987654   24566778999999999999999999999999997766 68999999543    22


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhh
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANA  229 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~  229 (255)
                      .+.++.   ..|++||++++.+++.++.|++++||+|++++| +.+.|+                 +   +  |+|+++.
T Consensus       157 ~~~~~~---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~  232 (264)
T 2pd6_A          157 VGNVGQ---TNYAASKAGVIGLTQTAARELGRHGIRCNSVLP-GFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADV  232 (264)
T ss_dssp             HCCTTB---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSCC----------CTGGGCTTCSCBCHHHHHHH
T ss_pred             cCCCCC---hhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-ecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence            222222   679999999999999999999999999999999 666554                 1   1  7999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++  +++...+++|+++.+|||+.
T Consensus       233 ~~~l--~~~~~~~~~G~~~~v~gg~~  256 (264)
T 2pd6_A          233 VAFL--ASEDSGYITGTSVEVTGGLF  256 (264)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTC-
T ss_pred             HHHH--cCCcccCCCCCEEEECCCce
Confidence            9999  77888899999999999973

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.4e-38  Score=290.94  Aligned_cols=214  Identities=29%  Similarity=0.430  Sum_probs=178.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++.++...  ++..+++.  ..++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~--~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA--TKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH--HHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999986422  22222221  245667778884  55678889999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |++|+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|+++++|+||++||    ..+..+.++.  
T Consensus       394 G~iDiLVnNAGi~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS----~ag~~~~~~~--  464 (604)
T 2et6_A          394 GTIDILVNNAGILR---DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITS----TSGIYGNFGQ--  464 (604)
T ss_dssp             SCCCEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECC----HHHHSCCTTB--
T ss_pred             CCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECC----hhhccCCCCC--
Confidence            99999999998654   25677889999999999999999999999999998888899999994    4333333333  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------H----h-HHhhhhhhhhhhccCCCCCeeece
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------E----A-IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------~----~-~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                       ..|++||+|+.+|+++|+.|++++|||||+|+| +. +|+        +    + |+|++..+.||  +++.+. +||+
T Consensus       465 -~~Y~asKaal~~lt~~la~El~~~gIrVn~v~P-G~-~T~m~~~~~~~~~~~~~~pe~vA~~v~~L--~s~~~~-itG~  538 (604)
T 2et6_A          465 -ANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAP-HA-ETAMTLSIMREQDKNLYHADQVAPLLVYL--GTDDVP-VTGE  538 (604)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CC-CCCC---------CCSSCGGGTHHHHHHT--TSTTCC-CCSC
T ss_pred             -hhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcC-CC-CCccccccCchhhccCCCHHHHHHHHHHH--hCCccC-CCCc
Confidence             679999999999999999999999999999999 43 443        1    1 89999999999  999888 9999


Q ss_pred             eEEecCCc
Q 025252          247 NLLVNGGF  254 (255)
Q Consensus       247 ~i~~dgG~  254 (255)
                      +|.+|||+
T Consensus       539 ~~~vdGG~  546 (604)
T 2et6_A          539 TFEIGGGW  546 (604)
T ss_dssp             EEEEETTE
T ss_pred             EEEECCCe
Confidence            99999996

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5e-38  Score=260.03  Aligned_cols=221  Identities=32%  Similarity=0.447  Sum_probs=188.8

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            356889999999999999999999999999999999999877666655542  246888999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++||||+....   .++ +.+.++|++++++|+.+++++++.++|.|++++.++|+++||...    ..+.+   
T Consensus        86 ~~~~d~vi~~Ag~~~~---~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~---  154 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGP---KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA----ENKNI---  154 (255)
T ss_dssp             HSSCCEEEECCCCCCC---CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TCCCT---
T ss_pred             cCCCCEEEECCCCCCC---CCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh----cCCCC---
Confidence            9999999999876542   233 578999999999999999999999999998777899999995432    22222   


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~  235 (255)
                      +...|++||++++.+++.++.|++++||++++++| +.+.|+                     ++  ++|+++++.++  
T Consensus       155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--  231 (255)
T 1fmc_A          155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP-GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL--  231 (255)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHH--
T ss_pred             CCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEec-ccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHHHH--
Confidence            23679999999999999999999999999999999 666553                     11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++...+++|+++.+|||..
T Consensus       232 ~~~~~~~~~G~~~~v~gg~~  251 (255)
T 1fmc_A          232 CSPAASWVSGQILTVSGGGV  251 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTSC
T ss_pred             hCCccccCCCcEEEECCcee
Confidence            78888899999999999963

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=5e-39  Score=266.49  Aligned_cols=211  Identities=20%  Similarity=0.254  Sum_probs=176.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||++|||++++++|+++|++|++++|+++..+++.+ +.  ..++..+     |+++++++++++.+.+|++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999876665543 21  1234333     567788889999899999999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      ||||||....  ..++.+.+.++|++++++|+.++++++++++|.|++++.|+||++||..+.    .+.+..   ..|+
T Consensus        76 lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~----~~~~~~---~~Y~  146 (254)
T 1zmt_A           76 LVSNDIFAPE--FQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF----GPWKEL---STYT  146 (254)
T ss_dssp             EEEECCCCCC--CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT----SCCTTC---HHHH
T ss_pred             EEECCCcCCC--CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccc----cCCCCc---hHHH
Confidence            9999886511  245677899999999999999999999999999987778999999965432    222222   6799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcch---------hhh-------------------Hh--HHhhhhhhhhhh
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL---------AMA-------------------EA--IASIANAALYNM  234 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~---------~t~-------------------~~--~~~~~~~~~~l~  234 (255)
                      +||++++++++.++.|++++||+||+|+| +.+         +|+                   ++  |+|++..++++ 
T Consensus       147 ~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l-  224 (254)
T 1zmt_A          147 SARAGACTLANALSKELGEYNIPVFAIGP-NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFL-  224 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCCEEEEEE-SSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEec-CccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHHHHHHHH-
Confidence            99999999999999999999999999999 777         554                   11  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.++||+++.+|||+.
T Consensus       225 -~s~~~~~~tG~~~~vdgG~~  244 (254)
T 1zmt_A          225 -ASGSCDYLTGQVFWLAGGFP  244 (254)
T ss_dssp             -HTTSCGGGTTCEEEESTTCC
T ss_pred             -hCcccCCccCCEEEECCCch
Confidence             88999999999999999974

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=8e-38  Score=257.38  Aligned_cols=215  Identities=25%  Similarity=0.328  Sum_probs=182.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  +..++.+|++|+++++++++    .+++
T Consensus         3 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~~   76 (244)
T 3d3w_A            3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERALG----SVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             cccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CCCEEEEeCCCHHHHHHHHH----HcCC
Confidence            45789999999999999999999999999999999999887777766553  45677999999999888776    4678


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++||||+...   ..++.+.+.++|++++++|+.++++++++++|.|++++ .++|+++||...    ..+.++   .
T Consensus        77 id~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~---~  146 (244)
T 3d3w_A           77 VDLLVNNAAVAL---LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS----QRAVTN---H  146 (244)
T ss_dssp             CCEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG----TSCCTT---B
T ss_pred             CCEEEECCccCC---CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh----ccCCCC---C
Confidence            999999987654   24566778999999999999999999999999997766 789999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||++++.+++.++.|++++||+|++|+| +.+.|+                   +   +  |+|+++++.++  +
T Consensus       147 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  223 (244)
T 3d3w_A          147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFL--L  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHH--H
T ss_pred             chHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe-ccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHH--c
Confidence            679999999999999999999999999999999 666543                   1   1  89999999999  7


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||+.
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 3d3w_A          224 SDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CccccCCCCCEEEECCCcc
Confidence            7878899999999999974

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=8.9e-38  Score=265.13  Aligned_cols=219  Identities=30%  Similarity=0.400  Sum_probs=186.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh-------CCCceEEEEeeCCCHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-------GHQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++       ...++.++.+|++|++++++++++
T Consensus        14 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   93 (303)
T 1yxm_A           14 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   93 (303)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence            4588999999999999999999999999999999999987776666554       234788999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +.+.+|++|++|||||...   ..++.+.+.++|++++++|+.++++++++++|.+.+++.++||++||..     ..+.
T Consensus        94 ~~~~~g~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-----~~~~  165 (303)
T 1yxm_A           94 TLDTFGKINFLVNNGGGQF---LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-----KAGF  165 (303)
T ss_dssp             HHHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-----TTCC
T ss_pred             HHHHcCCCCEEEECCCCCC---CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-----ccCC
Confidence            9999999999999987543   2455677899999999999999999999999966555578999999654     1122


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIAN  228 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~  228 (255)
                      +.   ...|+++|++++++++.++.|+.++||+|++|+| +.+.|+                        ++  |+|++.
T Consensus       166 ~~---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  241 (303)
T 1yxm_A          166 PL---AVHSGAARAGVYNLTKSLALEWACSGIRINCVAP-GVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSS  241 (303)
T ss_dssp             TT---CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHH
T ss_pred             Cc---chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHH
Confidence            22   2679999999999999999999999999999999 655433                        11  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCc
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++++  +++...+++|+++.+|||+
T Consensus       242 ~i~~l--~~~~~~~~~G~~~~v~gG~  265 (303)
T 1yxm_A          242 VVCFL--LSPAASFITGQSVDVDGGR  265 (303)
T ss_dssp             HHHHH--HSGGGTTCCSCEEEESTTG
T ss_pred             HHHHH--hCcccccCCCcEEEECCCe
Confidence            99999  8888899999999999996

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=1.5e-37  Score=263.57  Aligned_cols=221  Identities=24%  Similarity=0.334  Sum_probs=188.2

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.   ..++.++.+|++|+++++++++++.+
T Consensus        21 ~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (302)
T 1w6u_A           21 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK  100 (302)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999877766655542   24788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc-CCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      .++++|++|||||...   ..++.+.+.+++++++++|+.+++++++.++|.|. +++.++||++||..    ...+.+ 
T Consensus       101 ~~g~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~----~~~~~~-  172 (302)
T 1w6u_A          101 VAGHPNIVINNAAGNF---ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIY----AETGSG-  172 (302)
T ss_dssp             HTCSCSEEEECCCCCC---CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTH----HHHCCT-
T ss_pred             HcCCCCEEEECCCCCC---CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccc----cccCCC-
Confidence            9999999999987543   24556778999999999999999999999999996 45568999999543    222222 


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------H---h--HHhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------E---A--IASIANAAL  231 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~---~--~~~~~~~~~  231 (255)
                        +...|++||++++.+++.++.|++++||+|++|+| +.+.|+                    +   +  |+|+++++.
T Consensus       173 --~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~  249 (302)
T 1w6u_A          173 --FVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQP-GPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA  249 (302)
T ss_dssp             --TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             --CcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEee-ccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHH
Confidence              23679999999999999999999999999999999 655442                    0   1  799999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +++...+++|+++.+|||.
T Consensus       250 ~l--~~~~~~~~~G~~~~v~gg~  270 (302)
T 1w6u_A          250 FL--CSDYASWINGAVIKFDGGE  270 (302)
T ss_dssp             HH--TSGGGTTCCSCEEEESTTH
T ss_pred             HH--cCCcccccCCCEEEECCCe
Confidence            99  8888889999999999995

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.8e-38  Score=268.74  Aligned_cols=217  Identities=23%  Similarity=0.336  Sum_probs=179.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEe---------cCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIAD---------VQDNLGQALADKLGHQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~---------r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      +++++|+++||||++|||++++++|+++|++|++.+         |+.+..++..+++..... ...+|+++.+++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~-~~~~D~~~~~~~~~~~   83 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG-KAVANYDSVEAGEKLV   83 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC-EEEEECCCGGGHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC-eEEEeCCCHHHHHHHH
Confidence            568999999999999999999999999999999965         455555555555432111 2358999999999999


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +++.+.++++|+||||||....   .++.+.+.++|+.++++|+.++++++++++|.|++++.++||++||.    ....
T Consensus        84 ~~~~~~~g~iD~lVnnAG~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~----~~~~  156 (319)
T 1gz6_A           84 KTALDTFGRIDVVVNNAGILRD---RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA----SGIY  156 (319)
T ss_dssp             HHHHHHTSCCCEEEECCCCCCC---CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH----HHHH
T ss_pred             HHHHHHcCCCCEEEECCCCCCC---CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCh----hhcc
Confidence            9999999999999999886542   34567899999999999999999999999999988778999999954    2222


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------Hh--HHhhhhhhhhhhccCCC
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      +.++   ...|++||++++.|++.++.|++++||+||+|+| +.+ |+           ++  |++++..++|+  +++ 
T Consensus       157 ~~~~---~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~P-G~~-t~~~~~~~~~~~~~~~~p~dvA~~~~~l--~s~-  228 (319)
T 1gz6_A          157 GNFG---QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP-NAG-SRMTETVMPEDLVEALKPEYVAPLVLWL--CHE-  228 (319)
T ss_dssp             CCTT---CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-ECC-STTTGGGSCHHHHHHSCGGGTHHHHHHH--TST-
T ss_pred             CCCC---CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeC-CCc-cccccccCChhhhccCCHHHHHHHHHHH--hCc-
Confidence            3322   2679999999999999999999999999999999 543 21           11  89999999999  776 


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                      ..+++|+++.+|||+
T Consensus       229 ~~~~tG~~~~v~GG~  243 (319)
T 1gz6_A          229 SCEENGGLFEVGAGW  243 (319)
T ss_dssp             TCCCCSCEEEEETTE
T ss_pred             hhhcCCCEEEECCCe
Confidence            458999999999996

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.4e-38  Score=293.49  Aligned_cols=224  Identities=23%  Similarity=0.335  Sum_probs=171.8

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec---------CcchHHHHHHHhCCCceEEEEeeCCCHHH
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV---------QDNLGQALADKLGHQDVCYIHCDVSNERE   87 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   87 (255)
                      .....+++++|+++||||++|||+++|++|+++|++|++++|         +.+..+++.+++..... ...+|+++.++
T Consensus        10 ~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~D~~d~~~   88 (613)
T 3oml_A           10 SSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGG-EAVADYNSVID   88 (613)
T ss_dssp             -----CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTC-CEEECCCCGGG
T ss_pred             CcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCC-eEEEEeCCHHH
Confidence            344446799999999999999999999999999999999987         55566666655532211 23489999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCc
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTT  167 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~  167 (255)
                      ++++++++.+.+|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||.   
T Consensus        89 ~~~~~~~~~~~~g~iDiLVnnAGi~~---~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~---  162 (613)
T 3oml_A           89 GAKVIETAIKAFGRVDILVNNAGILR---DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSN---  162 (613)
T ss_dssp             HHHHHC----------CEECCCCCCC---CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCH---
T ss_pred             HHHHHHHHHHHCCCCcEEEECCCCCC---CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCH---
Confidence            99999999999999999999988764   256778899999999999999999999999999998888999999943   


Q ss_pred             ccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------Hh-----HHhhhhhhhhhhc
Q 025252          168 ACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------EA-----IASIANAALYNMA  235 (255)
Q Consensus       168 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------~~-----~~~~~~~~~~l~~  235 (255)
                       .+..+.++.   ..|++||+|+++|++.|+.|++++||+||+|+| +.+.+.       .+     |++++..++||  
T Consensus       163 -a~~~~~~~~---~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~P-g~~t~~~~~~~~~~~~~~~~pedvA~~v~~L--  235 (613)
T 3oml_A          163 -SGIYGNFGQ---VNYTAAKMGLIGLANTVAIEGARNNVLCNVIVP-TAASRMTEGILPDILFNELKPKLIAPVVAYL--  235 (613)
T ss_dssp             -HHHHCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-C------CCCCCHHHHTTCCGGGTHHHHHHT--
T ss_pred             -HHcCCCCCC---hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEEC-CCCChhhhhccchhhhhcCCHHHHHHHHHHh--
Confidence             333333333   779999999999999999999999999999999 443211       11     89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++. +++||+++.+|||+.
T Consensus       236 ~s~~-~~~tG~~i~vdGG~~  254 (613)
T 3oml_A          236 CHES-CEDNGSYIESAAGWA  254 (613)
T ss_dssp             TSTT-CCCCSCEEEEETTEE
T ss_pred             cCCC-cCCCceEEEECCCeE
Confidence            8888 899999999999973

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-37  Score=253.41  Aligned_cols=218  Identities=20%  Similarity=0.248  Sum_probs=188.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++|+++||||++|||++++++|+++|+       +|++++|+.+..+++.+++.  ..++.++.+|++|+++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            378999999999999999999999999       99999999877777666553  246889999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.++++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.+
T Consensus        81 ~~~~g~id~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~----~~~~~  153 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGR---FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA----TKAFR  153 (244)
T ss_dssp             HHHTSCCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCT
T ss_pred             HHhCCCCCEEEEcCCcCC---cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh----cCCCC
Confidence            999999999999987653   24566788999999999999999999999999998777899999995433    22222


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------Hh--HHhhhhhhhhhhccCCCCCe
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------EA--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------~~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      +   ...|++||++++++++.++.|++++||+|++++| +.+.|+           ++  |+|++..++++  +++...+
T Consensus       154 ~---~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~~~~  227 (244)
T 2bd0_A          154 H---SSIYCMSKFGQRGLVETMRLYARKCNVRITDVQP-GAVYTPMWGKVDDEMQALMMMPEDIAAPVVQA--YLQPSRT  227 (244)
T ss_dssp             T---CHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHH--HTSCTTE
T ss_pred             C---CchhHHHHHHHHHHHHHHHHHhhccCcEEEEEEC-CCccchhhhhccccccccCCCHHHHHHHHHHH--HhCCccc
Confidence            2   3679999999999999999999999999999999 777665           12  89999999999  8899999


Q ss_pred             eeceeEEecCCcC
Q 025252          243 VGKQNLLVNGGFR  255 (255)
Q Consensus       243 ~~G~~i~~dgG~~  255 (255)
                      ++|+++..|||..
T Consensus       228 ~~g~~~~~~~~~~  240 (244)
T 2bd0_A          228 VVEEIILRPTSGD  240 (244)
T ss_dssp             EEEEEEEEETTCC
T ss_pred             cchheEEeccccc
Confidence            9999999999853

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.4e-37  Score=254.79  Aligned_cols=225  Identities=15%  Similarity=0.156  Sum_probs=185.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC-
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG-  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-  100 (255)
                      |++|+++||||++|||++++++|+++|  ++|++++|+.+..+++.+. ...++.++.+|++++++++++++++.+.+| 
T Consensus         1 m~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            468999999999999999999999999  9999999998877666443 345789999999999999999999999988 


Q ss_pred             -CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------C-----CCcEEEeccCCCcc
Q 025252          101 -KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------R-----RGCILYTTGTGTTA  168 (255)
Q Consensus       101 -~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~ii~is~~~~~~  168 (255)
                       ++|++||||+....  ..++.+.+.+++++++++|+.+++++++.++|.|+++      +     .++||++||..+..
T Consensus        80 ~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~  157 (250)
T 1yo6_A           80 DGLSLLINNAGVLLS--YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GCCCEEEECCCCCCC--BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCCcEEEECCcccCC--CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence             99999999876541  2566778999999999999999999999999999765      4     78999999654322


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----h--HHhhhhhhhhhhccCCCCC
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----A--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      ..........+...|++||++++++++.++.|++++||+|++|+| +.++|+.     +  ++++++.++++  +++...
T Consensus       158 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~a~~~~~~--~~~~~~  234 (250)
T 1yo6_A          158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP-GWVQTNLGGKNAALTVEQSTAELISS--FNKLDN  234 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC-CCC-------------HHHHHHHHHH--HTTCCG
T ss_pred             CCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcC-CceecCCCCCCCCCCHHHHHHHHHHH--Hhcccc
Confidence            111000000233679999999999999999999999999999999 7888762     1  99999999999  777778


Q ss_pred             eeeceeEEecCCc
Q 025252          242 YVGKQNLLVNGGF  254 (255)
Q Consensus       242 ~~~G~~i~~dgG~  254 (255)
                      +++|+++.+|||.
T Consensus       235 ~~~G~~~~~~g~~  247 (250)
T 1yo6_A          235 SHNGRFFMRNLKP  247 (250)
T ss_dssp             GGTTCEEETTEEE
T ss_pred             cCCCeEEEECCcC
Confidence            8999999999984

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=6.4e-38  Score=254.95  Aligned_cols=194  Identities=26%  Similarity=0.304  Sum_probs=165.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+                  +|++|+++++++++++    ++
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~------------------~D~~~~~~v~~~~~~~----g~   59 (223)
T 3uce_A            2 MGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG------------------LDISDEKSVYHYFETI----GA   59 (223)
T ss_dssp             ---CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT------------------CCTTCHHHHHHHHHHH----CS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc------------------cCCCCHHHHHHHHHHh----CC
Confidence            3578999999999999999999999999999999998755                  8999999999888764    89


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||....  ..++.+.+.++|++++++|+.++++++++++|.|++  +|+|+++||..    ...+.++.   .
T Consensus        60 id~lv~nAg~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~g~iv~~sS~~----~~~~~~~~---~  128 (223)
T 3uce_A           60 FDHLIVTAGSYAP--AGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ--GGSITLTSGML----SRKVVANT---Y  128 (223)
T ss_dssp             EEEEEECCCCCCC--CSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE--EEEEEEECCGG----GTSCCTTC---H
T ss_pred             CCEEEECCCCCCC--CCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC--CeEEEEecchh----hccCCCCc---h
Confidence            9999999886532  256788899999999999999999999999999964  58999999543    33333333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhhc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~~  235 (255)
                      .|++||++++++++.++.|+++  ||||+|+| +.++|+                        ++  |+|++.+++++  
T Consensus       129 ~Y~asK~a~~~~~~~la~e~~~--i~vn~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--  203 (223)
T 3uce_A          129 VKAAINAAIEATTKVLAKELAP--IRVNAISP-GLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFA--  203 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTT--SEEEEEEE-CSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHhhcC--cEEEEEEe-CCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHH--
Confidence            7999999999999999999988  99999999 777775                        11  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++  +.++||+++.+|||+.
T Consensus       204 ~~--~~~~tG~~i~vdgG~~  221 (223)
T 3uce_A          204 IQ--NSYMTGTVIDVDGGAL  221 (223)
T ss_dssp             HH--CTTCCSCEEEESTTGG
T ss_pred             cc--CCCCCCcEEEecCCee
Confidence            65  4799999999999974

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=6.5e-38  Score=264.74  Aligned_cols=216  Identities=19%  Similarity=0.184  Sum_probs=180.6

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ..++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++. .++.++.+|++|+++++++++++    +
T Consensus        11 ~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~v~~~~~~~----~   85 (291)
T 3rd5_A           11 LPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMA-GQVEVRELDLQDLSSVRRFADGV----S   85 (291)
T ss_dssp             CCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSS-SEEEEEECCTTCHHHHHHHHHTC----C
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-CCeeEEEcCCCCHHHHHHHHHhc----C
Confidence            346899999999999999999999999999999999999988888877764 57899999999999999888866    7


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC------
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG------  174 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~------  174 (255)
                      ++|++|||||...     +..+.+.++|++++++|+.++++++++++|.|.+    +||++||..+........      
T Consensus        86 ~iD~lv~nAg~~~-----~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~----riv~isS~~~~~~~~~~~~~~~~~  156 (291)
T 3rd5_A           86 GADVLINNAGIMA-----VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD----RVVTVSSMAHWPGRINLEDLNWRS  156 (291)
T ss_dssp             CEEEEEECCCCCS-----CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE----EEEEECCGGGTTCCCCSSCTTCSS
T ss_pred             CCCEEEECCcCCC-----CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh----heeEeechhhccCCCCcccccccc
Confidence            8999999988653     2245678899999999999999999999999963    799999665332211000      


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccC--cEEeEeccCcchhhh-------------------Hh---HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYG--IRVDCVSHTYGLAMA-------------------EA---IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g--i~v~~v~p~~~~~t~-------------------~~---~~~~~~~~  230 (255)
                      ....+...|++||++++.+++.++.|++++|  |+||+|+| |.++|+                   ++   |+|++..+
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~  235 (291)
T 3rd5_A          157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHP-GYSHTNLQGASGRKLGDALMSAATRVVATDADFGARQT  235 (291)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECC-SGGGSCC--------------------CHHHHHHHHHH
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeC-CCCccccccccchHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence            1112235799999999999999999999888  99999999 888886                   11   89999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++  +++  .+++|+++.+|||+.
T Consensus       236 ~~l--~~~--~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          236 LYA--ASQ--DLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHH--HHS--CCCTTCEEEETTSSS
T ss_pred             HHH--HcC--CCCCCceeCCccccc
Confidence            999  776  389999999999974

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=7.2e-38  Score=259.37  Aligned_cols=221  Identities=25%  Similarity=0.336  Sum_probs=185.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+ ++..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus         4 ~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (258)
T 3afn_B            4 DLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF   83 (258)
T ss_dssp             GGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3689999999999999999999999999999999998 776666655542  2478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--C---CcEEEeccCCCcccccc-c
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--R---GCILYTTGTGTTACTEI-E  173 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~---~~ii~is~~~~~~~~~~-~  173 (255)
                      +++|++||||+...  ...++.+.+.+++++++++|+.+++++++.++|.|.+++  .   ++|+++||..+    .. +
T Consensus        84 g~id~vi~~Ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~  157 (258)
T 3afn_B           84 GGIDVLINNAGGLV--GRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG----HTGG  157 (258)
T ss_dssp             SSCSEEEECCCCCC--CCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH----HHCC
T ss_pred             CCCCEEEECCCCcC--CcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh----ccCC
Confidence            99999999987522  124566788999999999999999999999999996543  3   89999995432    22 2


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAAL  231 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~  231 (255)
                      .+   +...|++||++++.+++.++.|++++||+|++|+| +.+.|+                 +   +  ++|++.++.
T Consensus       158 ~~---~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~  233 (258)
T 3afn_B          158 GP---GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSP-GTVDTAFHADKTQDVRDRISNGIPMGRFGTAEEMAPAFL  233 (258)
T ss_dssp             CT---TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGGGTHHHHH
T ss_pred             CC---CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeC-CCcccccccccCHHHHHHHhccCCCCcCCCHHHHHHHHH
Confidence            22   23679999999999999999999999999999999 666553                 1   1  899999999


Q ss_pred             hhhccCCCCC-eeeceeEEecCCcC
Q 025252          232 YNMAKDDDTS-YVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~-~~~G~~i~~dgG~~  255 (255)
                      ++  +++... +++|+++.+|||+.
T Consensus       234 ~l--~~~~~~~~~~G~~~~v~gg~~  256 (258)
T 3afn_B          234 FF--ASHLASGYITGQVLDINGGQY  256 (258)
T ss_dssp             HH--HCHHHHTTCCSEEEEESTTSS
T ss_pred             HH--hCcchhccccCCEEeECCCcc
Confidence            99  776666 89999999999973

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.7e-38  Score=257.37  Aligned_cols=208  Identities=13%  Similarity=0.039  Sum_probs=178.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .++|+++||||++|||++++++|+++|++|++++|+++...        ....++.+|++|+++++++++++.+.+  ++
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~   76 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA--------SASVIVKMTDSFTEQADQVTAEVGKLLGDQK   76 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS--------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc--------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999876532        245678899999999999999999999  79


Q ss_pred             ccEEEEcCCCccccCccCC-CCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSI-LDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||....   .++ .+.+.++|++++++|+.++++++++++|.|++  .|+||++||..    ...+.++.   
T Consensus        77 iD~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~g~iv~isS~~----~~~~~~~~---  144 (241)
T 1dhr_A           77 VDAILCVAGGWAG---GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAKA----ALDGTPGM---  144 (241)
T ss_dssp             EEEEEECCCCCCC---BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGG----GGSCCTTB---
T ss_pred             CCEEEEcccccCC---CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc--CCEEEEECCHH----HccCCCCc---
Confidence            9999999876542   344 56788999999999999999999999999964  48999999543    23233222   


Q ss_pred             cccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhhccCCCCCeee
Q 025252          181 NYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMAE------------A--IASIANAALYNMAKDDDTSYVG  244 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~~~~~~~~~~~  244 (255)
                      ..|++||++++.+++.++.|++  ++|||||+|+| +.++|+.            .  ++|++..+.++  +++...+++
T Consensus       145 ~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~vA~~v~~l--~~~~~~~~~  221 (241)
T 1dhr_A          145 IGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLP-VTLDTPMNRKSMPEADFSSWTPLEFLVETFHDW--ITGNKRPNS  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEE-SCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHH--HTTTTCCCT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEec-CcccCccccccCcchhhccCCCHHHHHHHHHHH--hcCCCcCcc
Confidence            6799999999999999999999  89999999999 7777751            1  79999999999  889999999


Q ss_pred             ceeEEecCCc
Q 025252          245 KQNLLVNGGF  254 (255)
Q Consensus       245 G~~i~~dgG~  254 (255)
                      |+++.+|||.
T Consensus       222 G~~~~v~g~~  231 (241)
T 1dhr_A          222 GSLIQVVTTD  231 (241)
T ss_dssp             TCEEEEEEET
T ss_pred             ceEEEEeCCC
Confidence            9999999984

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.6e-37  Score=253.70  Aligned_cols=209  Identities=18%  Similarity=0.225  Sum_probs=175.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++|++|++++|+++.++++.+++. .++.++.+|++++++++++++++.+   ..|++|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~lv   77 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLS-NNVGYRARDLASHQEVEQLFEQLDS---IPSTVV   77 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCS-SCCCEEECCTTCHHHHHHHHHSCSS---CCSEEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-hccCeEeecCCCHHHHHHHHHHHhh---cCCEEE
Confidence            679999999999999999999999999999999998888887764 5788999999999999999887644   349999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      ||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++ ++||++||..    ...+.++.   ..|++|
T Consensus        78 ~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~iv~isS~~----~~~~~~~~---~~Y~as  146 (230)
T 3guy_A           78 HSAGSGY---FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP-VNVVMIMSTA----AQQPKAQE---STYCAV  146 (230)
T ss_dssp             ECCCCCC---CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC-CEEEEECCGG----GTSCCTTC---HHHHHH
T ss_pred             EeCCcCC---CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEeecc----cCCCCCCC---chhHHH
Confidence            9987654   35667889999999999999999999999999997655 4999999543    33333333   679999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccC-CCCCeeeceeEEec
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKD-DDTSYVGKQNLLVN  251 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~-~~~~~~~G~~i~~d  251 (255)
                      |++++++++.++.|++++|||||+|+| |.++|+            ++  |+|++..+.++  ++ +...++||+.+..|
T Consensus       147 Kaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~l--~~~~~~~~itg~~~~~~  223 (230)
T 3guy_A          147 KWAVKGLIESVRLELKGKPMKIIAVYP-GGMATEFWETSGKSLDTSSFMSAEDAALMIHGA--LANIGNGYVSDITVNRE  223 (230)
T ss_dssp             HHHHHHHHHHHHHHTTTSSCEEEEEEE-CCC----------------CCCHHHHHHHHHHH--CCEETTEEEEEEEEEC-
T ss_pred             HHHHHHHHHHHHHHHHhcCeEEEEEEC-CcccChHHHhcCCCCCcccCCCHHHHHHHHHHH--HhCcCCCCccceeecCC
Confidence            999999999999999999999999999 888886            11  99999999998  55 78999999999887


Q ss_pred             CC
Q 025252          252 GG  253 (255)
Q Consensus       252 gG  253 (255)
                      ..
T Consensus       224 ~~  225 (230)
T 3guy_A          224 GH  225 (230)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=2.6e-37  Score=254.29  Aligned_cols=217  Identities=23%  Similarity=0.328  Sum_probs=184.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhC--CCceEE-EEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLG--HQDVCY-IHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~--~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+++||||++|||++++++|+++|++|+++ +|+++..+++.+++.  ..++.. +.+|++|+++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4789999999999999999999999999998 888777666655442  235666 899999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++||||+...   ..++.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..    ...+.++.   .
T Consensus        81 ~d~li~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~----~~~~~~~~---~  150 (245)
T 2ph3_A           81 LDTLVNNAGITR---DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVV----GILGNPGQ---A  150 (245)
T ss_dssp             CCEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTH----HHHCCSSB---H
T ss_pred             CCEEEECCCCCC---CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChh----hccCCCCC---c
Confidence            999999987653   2455678899999999999999999999999999877779999999543    22222222   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||++++.+++.++.|++++||+|++++| +.+.|+                    ++  ++|++..+.++  +++.
T Consensus       151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~~~~  227 (245)
T 2ph3_A          151 NYVASKAGLIGFTRAVAKEYAQRGITVNAVAP-GFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVAFL--VSEK  227 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--TSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHHHcCeEEEEEEE-EeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCcc
Confidence            79999999999999999999999999999999 666554                    11  89999999999  7777


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      ..+++|+++.+|||+.
T Consensus       228 ~~~~~G~~~~v~gg~~  243 (245)
T 2ph3_A          228 AGYITGQTLCVDGGLT  243 (245)
T ss_dssp             GTTCCSCEEEESTTCS
T ss_pred             cccccCCEEEECCCCC
Confidence            8899999999999974

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=1.2e-37  Score=257.73  Aligned_cols=214  Identities=16%  Similarity=0.163  Sum_probs=177.3

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ..++..+..+|+++||||++|||++++++|+++|++|++++|+++...          ...+.+|++|.++++++++++.
T Consensus        13 ~~~~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~----------~~~~~~d~~d~~~v~~~~~~~~   82 (251)
T 3orf_A           13 GLVPRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA----------DHSFTIKDSGEEEIKSVIEKIN   82 (251)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS----------SEEEECSCSSHHHHHHHHHHHH
T ss_pred             cccccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc----------ccceEEEeCCHHHHHHHHHHHH
Confidence            345556677999999999999999999999999999999999976532          2357899999999999999999


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +.++++|++|||||.....  ....+.+.++|++++++|+.++++++++++|.|++  +|+||++||..    ...+.++
T Consensus        83 ~~~g~iD~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~----~~~~~~~  154 (251)
T 3orf_A           83 SKSIKVDTFVCAAGGWSGG--NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ--GGLFVLTGASA----ALNRTSG  154 (251)
T ss_dssp             TTTCCEEEEEECCCCCCCB--CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGG----GGSCCTT
T ss_pred             HHcCCCCEEEECCccCCCC--CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--CCEEEEEechh----hccCCCC
Confidence            9999999999998765422  23567789999999999999999999999999964  58999999543    3333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhhccCC-C
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMAE------------A--IASIANAALYNMAKDD-D  239 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~~~~~-~  239 (255)
                      .   ..|++||++++.+++.++.|++  ++||+||+|+| |.++|+.            +  |+|++++++++  +++ .
T Consensus       155 ~---~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~dva~~i~~l--~~~~~  228 (251)
T 3orf_A          155 M---IAYGATKAATHHIIKDLASENGGLPAGSTSLGILP-VTLDTPTNRKYMSDANFDDWTPLSEVAEKLFEW--STNSD  228 (251)
T ss_dssp             B---HHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEE-SCBCCHHHHHHCTTSCGGGSBCHHHHHHHHHHH--HHCGG
T ss_pred             C---chhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEec-CcCcCcchhhhcccccccccCCHHHHHHHHHHH--hcCcc
Confidence            3   6799999999999999999987  89999999999 8888761            1  89999999999  777 8


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                      +.++||+++.+++|.
T Consensus       229 ~~~~tG~~i~v~~g~  243 (251)
T 3orf_A          229 SRPTNGSLVKFETKS  243 (251)
T ss_dssp             GCCCTTCEEEEEEET
T ss_pred             ccCCcceEEEEecCC
Confidence            899999999999874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=6.9e-38  Score=267.46  Aligned_cols=221  Identities=20%  Similarity=0.200  Sum_probs=174.0

Q ss_pred             eeecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCcc-----------hHHHHHHHhCCCc----eEEEEee---
Q 025252           22 YRLQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQDN-----------LGQALADKLGHQD----VCYIHCD---   81 (255)
Q Consensus        22 ~~~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~~-----------~~~~~~~~~~~~~----~~~~~~D---   81 (255)
                      +++++|+++||||  ++|||++++++|+++|++|++++|++.           .+++. +++....    ..++.+|   
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~   83 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDED-RKLPDGSLIEFAGVYPLDAAF   83 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHH-HBCTTSCBCCCSCEEECCTTC
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhh-hhhhccccccccccccccccc
Confidence            5588999999999  899999999999999999999987531           12222 2221111    2344444   


Q ss_pred             ---------CC--------CHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252           82 ---------VS--------NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus        82 ---------~~--------~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                               ++        |+++++++++++.+.+|++|+||||||.... ...++.+.+.++|++++++|+.+++++++
T Consensus        84 ~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           84 DKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPE-VTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             SSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTT-TTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCc-CCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                     33        2568999999999999999999999875421 12456778999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh---
Q 025252          145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA---  220 (255)
Q Consensus       145 ~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~---  220 (255)
                      +++|.|++  +|+||++||..+    ..+.++.  ...|++||+++++|++.++.|+++ +|||||+|+| |.++|+   
T Consensus       163 ~~~~~m~~--~g~Iv~isS~~~----~~~~~~~--~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P-G~v~T~~~~  233 (315)
T 2o2s_A          163 HFGPIMNE--GGSAVTLSYLAA----ERVVPGY--GGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISA-GPLKSRAAS  233 (315)
T ss_dssp             HHSTTEEE--EEEEEEEEEGGG----TSCCTTC--CTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEE-CCCCCHHHH
T ss_pred             HHHHHHhc--CCEEEEEecccc----cccCCCc--cHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEec-ccccchhhh
Confidence            99999964  489999995432    2222211  136999999999999999999985 8999999999 766553   


Q ss_pred             ----------------------H---h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ----------------------E---A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ----------------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                            +   +  |+|++..++||  +++.+.++||+++.+|||+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L--~s~~~~~itG~~i~vdGG~~  293 (315)
T 2o2s_A          234 AIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFL--LSPLARAVSGVTLYVDNGLH  293 (315)
T ss_dssp             HTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTGG
T ss_pred             hccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHH--hCchhccCcCCEEEECCCee
Confidence                                  1   1  89999999999  89999999999999999973

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=5.4e-37  Score=252.32  Aligned_cols=215  Identities=24%  Similarity=0.337  Sum_probs=181.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+++..+++.++..  ++.++.+|++|+++++++++    .+++
T Consensus         3 ~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~~~   76 (244)
T 1cyd_A            3 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKALG----GIGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHT----TCCC
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc--CCCcEEecCCCHHHHHHHHH----HcCC
Confidence            35789999999999999999999999999999999999877776666543  46677999999999888776    4578


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++||||+...   ..++.+.+.++|++++++|+.+++++++.++|.|.+++ .++||++||...    ..+.++   .
T Consensus        77 id~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~---~  146 (244)
T 1cyd_A           77 VDLLVNNAALVI---MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA----HVTFPN---L  146 (244)
T ss_dssp             CSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG----TSCCTT---B
T ss_pred             CCEEEECCcccC---CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh----cCCCCC---c
Confidence            999999987654   24566788999999999999999999999999997766 689999995432    222222   2


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||++++.+++.++.|++++||+|++++| +.+.++                      ++  ++|+++++.++  +
T Consensus       147 ~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l--~  223 (244)
T 1cyd_A          147 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP-TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFL--L  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHH--H
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHH--h
Confidence            679999999999999999999999999999999 666554                      11  89999999999  8


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++...+++|+++.+|||+.
T Consensus       224 ~~~~~~~~G~~~~v~gG~~  242 (244)
T 1cyd_A          224 SDRSASTSGGGILVDAGYL  242 (244)
T ss_dssp             SGGGTTCCSSEEEESTTGG
T ss_pred             CchhhcccCCEEEECCCcc
Confidence            8888899999999999973

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-37  Score=254.94  Aligned_cols=209  Identities=16%  Similarity=0.145  Sum_probs=177.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      |++|+++||||++|||++++++|+++|++|++++|+++...        ....++.+|++|+++++++++++.+.+  ++
T Consensus         1 m~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            1 MSSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc--------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999999876532        245678899999999999999999998  79


Q ss_pred             ccEEEEcCCCccccCccCC-CCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSI-LDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|++|||||....   .++ .+.+.++|++++++|+.+++++++.++|.|++  .++||++||..    ...+.++.   
T Consensus        73 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~isS~~----~~~~~~~~---  140 (236)
T 1ooe_A           73 VDGVFCVAGGWAG---GSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAAA----AMGPTPSM---  140 (236)
T ss_dssp             EEEEEECCCCCCC---BCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCGG----GGSCCTTB---
T ss_pred             CCEEEECCcccCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc--CCEEEEECchh----hccCCCCc---
Confidence            9999999876542   344 56788999999999999999999999999964  58999999543    23333222   


Q ss_pred             cccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhhH-------------h-HHhhhhhhhhhhccCCCCCeee
Q 025252          181 NYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMAE-------------A-IASIANAALYNMAKDDDTSYVG  244 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~~-------------~-~~~~~~~~~~l~~~~~~~~~~~  244 (255)
                      ..|++||++++++++.++.|++  ++||+||+|+| +.++|+.             . ++|++..+++++ +++...++|
T Consensus       141 ~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~dvA~~i~~~l-~s~~~~~~~  218 (236)
T 1ooe_A          141 IGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP-VTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWT-TETSSRPSS  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEE-SCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHH-HCGGGCCCT
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEec-CcccCcchhhcCCCccccccCCHHHHHHHHHHHH-cCCCccccc
Confidence            6799999999999999999998  99999999999 7777751             1 799999998441 588899999


Q ss_pred             ceeEEecCCc
Q 025252          245 KQNLLVNGGF  254 (255)
Q Consensus       245 G~~i~~dgG~  254 (255)
                      |+.+.+|||.
T Consensus       219 G~~~~v~gg~  228 (236)
T 1ooe_A          219 GALLKITTEN  228 (236)
T ss_dssp             TCEEEEEEET
T ss_pred             ccEEEEecCC
Confidence            9999999985

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-37  Score=256.08  Aligned_cols=212  Identities=18%  Similarity=0.284  Sum_probs=172.9

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+.+..+++|+++||||++|||++++++|+++|++|++++|+++..+    ++  .++.++ +|+  .++++++++++  
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~~--~~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RS--GHRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HT--CSEEEE-CCT--TTCHHHHHHHS--
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHH----hh--CCeEEE-eeH--HHHHHHHHHHh--
Confidence            44456689999999999999999999999999999999999874332    23  256677 999  45566666554  


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                        .++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.++.
T Consensus        80 --~~iD~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~~  150 (249)
T 1o5i_A           80 --KEVDILVLNAGGPK---AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSV----ISPIENL  150 (249)
T ss_dssp             --CCCSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG----TSCCTTB
T ss_pred             --cCCCEEEECCCCCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHh----cCCCCCC
Confidence              38999999987653   24567789999999999999999999999999998877899999995543    2222222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------H-----------h--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------E-----------A--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------~-----------~--~~~~~~~~~~l~  234 (255)
                         ..|++||++++.+++.++.|++++||+||+|+| +.++|+          +           +  |+|++..++++ 
T Consensus       151 ---~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l-  225 (249)
T 1o5i_A          151 ---YTSNSARMALTGFLKTLSFEVAPYGITVNCVAP-GWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFL-  225 (249)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH-
T ss_pred             ---chHHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence               679999999999999999999999999999999 766554          1           1  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++.+.+++|+++.+|||+.
T Consensus       226 -~s~~~~~~tG~~~~vdgG~~  245 (249)
T 1o5i_A          226 -CSEKASYLTGQTIVVDGGLS  245 (249)
T ss_dssp             -HSGGGTTCCSCEEEESTTCC
T ss_pred             -cCccccCCCCCEEEECCCcc
Confidence             88888999999999999974

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.5e-36  Score=248.39  Aligned_cols=215  Identities=24%  Similarity=0.271  Sum_probs=181.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ++.++.+|++|+++++++++++.+.++++|
T Consensus         3 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            3 GMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             -CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899999999999999999999999999999999887777776654  688899999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+.    .+.+   +...|
T Consensus        81 ~li~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~----~~~~---~~~~Y  150 (234)
T 2ehd_A           81 ALVNNAGVGV---MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGK----NPFK---GGAAY  150 (234)
T ss_dssp             EEEECCCCCC---CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTT----SCCT---TCHHH
T ss_pred             EEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhc----CCCC---CCchh
Confidence            9999987653   245667889999999999999999999999999988888999999965432    2222   23679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH---------h--HHhhhhhhhhhhccCCCCCeeeceeEEecC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE---------A--IASIANAALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~---------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                      ++||++++.+++.++.|++++||+|++|+| +.++|+.         .  |+|+++.++++  +++...+++|+.+..++
T Consensus       151 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~dvA~~~~~l--~~~~~~~~~g~~~~~~~  227 (234)
T 2ehd_A          151 NASKFGLLGLAGAAMLDLREANVRVVNVLP-GSVDTGFAGNTPGQAWKLKPEDVAQAVLFA--LEMPGHAMVSEIELRPT  227 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEC-C----------------CCHHHHHHHHHHH--HHSCCSSCCCEEECCC-
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-CCCcCCcccccccccCCCCHHHHHHHHHHH--hCCCcccccceEEEeec
Confidence            999999999999999999999999999999 7776641         2  89999999999  88888999999776655


Q ss_pred             C
Q 025252          253 G  253 (255)
Q Consensus       253 G  253 (255)
                      +
T Consensus       228 ~  228 (234)
T 2ehd_A          228 R  228 (234)
T ss_dssp             -
T ss_pred             C
Confidence            3

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=2e-37  Score=260.40  Aligned_cols=186  Identities=20%  Similarity=0.291  Sum_probs=163.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++|+++||||++|||++++++|+++|++|++++|+.+..+++.++.+ .++.++.+|++|+++++++++++.+.+|++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYP-DRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            4678999999999999999999999999999999999988888877664 578999999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..    ...+.++   ...
T Consensus        81 d~lv~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~----~~~~~~~---~~~  150 (281)
T 3m1a_A           81 DVLVNNAGRTQ---VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFG----GQLSFAG---FSA  150 (281)
T ss_dssp             SEEEECCCCEE---ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTCCCTT---CHH
T ss_pred             CEEEECCCcCC---CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcc----ccCCCCC---chH
Confidence            99999988654   2466788999999999999999999999999999888889999999543    3333333   377


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      |++||++++++++.++.|++++||+||+|+| +.++|+
T Consensus       151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~  187 (281)
T 3m1a_A          151 YSATKAALEQLSEGLADEVAPFGIKVLIVEP-GAFRTN  187 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCT
T ss_pred             HHHHHHHHHHHHHHHHHHhhccCcEEEEEec-Cccccc
Confidence            9999999999999999999999999999999 665543

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1e-37  Score=266.89  Aligned_cols=222  Identities=21%  Similarity=0.224  Sum_probs=160.3

Q ss_pred             eeecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCc-----------chHH-----------HHHHHhCCC----
Q 025252           22 YRLQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQD-----------NLGQ-----------ALADKLGHQ----   73 (255)
Q Consensus        22 ~~~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~-----------~~~~-----------~~~~~~~~~----   73 (255)
                      +++++|+++||||  ++|||++++++|+++|++|++++|++           +.++           ++.+++...    
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            5688999999999  89999999999999999999998642           1111           112222111    


Q ss_pred             -ceEEEEee------------CCC--------HHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHH
Q 025252           74 -DVCYIHCD------------VSN--------EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLL  132 (255)
Q Consensus        74 -~~~~~~~D------------~~~--------~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~  132 (255)
                       ...++.+|            +++        +++++++++++.+.+|++|+||||||.... ...++.+.+.++|++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~-~~~~~~~~~~~~~~~~~  163 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPE-VTKPLLQTSRKGYLAAV  163 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSS-SSSCGGGCCHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCC-CCCccccCCHHHHHHHH
Confidence             12444443            333        447899999999999999999999875421 12466778999999999


Q ss_pred             hhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEe
Q 025252          133 AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCV  211 (255)
Q Consensus       133 ~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v  211 (255)
                      ++|+.++++++++++|+|++  .|+||++||..+.    .+.++.  ...|++||+++++|++.|+.|+++ +|||||+|
T Consensus       164 ~vN~~g~~~l~~~~~~~m~~--~g~Iv~isS~~~~----~~~~~~--~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v  235 (319)
T 2ptg_A          164 SSSSYSFVSLLQHFLPLMKE--GGSALALSYIASE----KVIPGY--GGGMSSAKAALESDCRTLAFEAGRARAVRVNCI  235 (319)
T ss_dssp             HHHTHHHHHHHHHHGGGEEE--EEEEEEEEECC------------------------THHHHHHHHHHHHHHHCCEEEEE
T ss_pred             hHhhHHHHHHHHHHHHHHhc--CceEEEEeccccc----cccCcc--chhhHHHHHHHHHHHHHHHHHhccccCeeEEEE
Confidence            99999999999999999965  3899999965432    221111  035999999999999999999985 89999999


Q ss_pred             ccCcchhhh-------------------------H---h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          212 SHTYGLAMA-------------------------E---A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       212 ~p~~~~~t~-------------------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +| |.++|+                         +   +  |+|++.+++||  +++.+.++||++|.+|||++
T Consensus       236 ~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L--~s~~~~~itG~~i~vdGG~~  306 (319)
T 2ptg_A          236 SA-GPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFL--LSPLARAVTGATLYVDNGLH  306 (319)
T ss_dssp             EE-CCCC-------------------------------CCCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTCT
T ss_pred             ee-CCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHH--hCcccCCccCCEEEECCCce
Confidence            99 766553                         1   1  89999999999  89999999999999999974

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=3.9e-37  Score=254.93  Aligned_cols=209  Identities=18%  Similarity=0.145  Sum_probs=174.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDN--LGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~   97 (255)
                      |++++|+++||||++|||++++++|+++|++ |++++|+.+  ..+++.+..+..++.++.+|++|+ ++++++++++.+
T Consensus         1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (254)
T 1sby_A            1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHH
Confidence            3578999999999999999999999999996 999999863  344444443335788999999998 999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~  174 (255)
                      .++++|++|||||..           +.+++++++++|+.++++++++++|.|.+++   .|+||++||..+    ..+.
T Consensus        81 ~~g~id~lv~~Ag~~-----------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~  145 (254)
T 1sby_A           81 QLKTVDILINGAGIL-----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG----FNAI  145 (254)
T ss_dssp             HHSCCCEEEECCCCC-----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG----TSCC
T ss_pred             hcCCCCEEEECCccC-----------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh----ccCC
Confidence            999999999998752           3567899999999999999999999997654   589999995433    2222


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH----------------------h--HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE----------------------A--IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~----------------------~--~~~~~~~~  230 (255)
                      +..   ..|++||++++++++.++.|++++||+|++|+| +.++|+.                      +  |+|++..+
T Consensus       146 ~~~---~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i  221 (254)
T 1sby_A          146 HQV---PVYSASKAAVVSFTNSLAKLAPITGVTAYSINP-GITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             TTS---HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEE-CSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             CCc---hHHHHHHHHHHHHHHHHHHHhccCCeEEEEEec-CCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence            222   679999999999999999999989999999999 7776641                      1  78999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++  ++   .+.+|+++.+|||+
T Consensus       222 ~~~--~~---~~~~G~~~~v~gG~  240 (254)
T 1sby_A          222 VKA--IE---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHH--HH---HCCTTCEEEEETTE
T ss_pred             HHH--HH---cCCCCCEEEEeCCc
Confidence            888  43   47899999999994

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.2e-37  Score=262.13  Aligned_cols=221  Identities=22%  Similarity=0.206  Sum_probs=172.9

Q ss_pred             eeecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcc-----------hHHHHHHHhCCCc----eEEEEee---
Q 025252           22 YRLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDN-----------LGQALADKLGHQD----VCYIHCD---   81 (255)
Q Consensus        22 ~~~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~-----------~~~~~~~~~~~~~----~~~~~~D---   81 (255)
                      +++++|+++||||+  +|||++++++|+++|++|++++|++.           .++++ +++....    ...+.+|   
T Consensus         4 ~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            4 IDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECTTC
T ss_pred             cccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccceec
Confidence            45789999999999  99999999999999999999987531           11111 1121111    2334443   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252           82 -----VS----N--------EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus        82 -----~~----~--------~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                           ++    |        +++++++++++.+.+|++|+||||||.... ...++.+.+.++|++++++|+.+++++++
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~-~~~~~~~~~~~~~~~~~~vN~~g~~~l~~  161 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPE-VSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTT-TTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCcc-CCCCcccCCHHHHHHHHHHhhhHHHHHHH
Confidence                 22    2        568899999999999999999999875321 12456778999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh---
Q 025252          145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA---  220 (255)
Q Consensus       145 ~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~---  220 (255)
                      +++|.|++  +|+||++||..+    ..+.++.  ...|++||++++++++.++.|+++ +|||||+|+| +.++|+   
T Consensus       162 ~~~~~m~~--~g~iv~isS~~~----~~~~~~~--~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~P-G~v~T~~~~  232 (297)
T 1d7o_A          162 HFLPIMNP--GGASISLTYIAS----ERIIPGY--GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA-GPLGSRAAK  232 (297)
T ss_dssp             HHGGGEEE--EEEEEEEECGGG----TSCCTTC--TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCCBCCCSS
T ss_pred             HHHHHhcc--CceEEEEecccc----ccCCCCc--chHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEec-cccccchhh
Confidence            99999964  489999995432    2222211  136999999999999999999985 8999999999 766653   


Q ss_pred             ----------------H---h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ----------------E---A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ----------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                      +   +  |+|++..++||  +++.+.++||+++.+|||++
T Consensus       233 ~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~l--~s~~~~~itG~~i~vdgG~~  286 (297)
T 1d7o_A          233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFL--VSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTGG
T ss_pred             hccccHHHHHHhhccCCCCCCCCHHHHHHHHHHH--hCccccCCCCCEEEECCCce
Confidence                            1   1  89999999999  88889999999999999973

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=1.1e-36  Score=263.01  Aligned_cols=218  Identities=13%  Similarity=0.043  Sum_probs=175.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecCcchH---------------HHHHHHhCCCceEEEEeeCCCHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLG---------------QALADKLGHQDVCYIHCDVSNEREV   88 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~~~~~---------------~~~~~~~~~~~~~~~~~D~~~~~~~   88 (255)
                      .+|+++||||++|||+++++.|++ .|++|++++|+.+..               .+..++. ..++..+.+|+++++++
T Consensus        46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~-G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK-GLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc-CCceEEEECCCCCHHHH
Confidence            589999999999999999999999 999999998875432               1122222 34688899999999999


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCccc----------cCccCC---------------------CCCChHHHHHHHhhhhh
Q 025252           89 INLVDTTVAKFGKLDILVNSGCNLEY----------RGFVSI---------------------LDTPKSDLERLLAVNTI  137 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~~a~~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n~~  137 (255)
                      +++++++.+.+|++|+||||||....          ....++                     .+.+.++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            99999999999999999999876410          012333                     67899999999999999


Q ss_pred             hHH-HHHHHHHHH-hcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhccc-CcEEeEeccC
Q 025252          138 GGF-LVAKHAARV-MVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY-GIRVDCVSHT  214 (255)
Q Consensus       138 ~~~-~l~~~~~~~-l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~-gi~v~~v~p~  214 (255)
                      +.+ ++++++.+. |. +++|+||++||.++.    .+.+.. ....|++||+++++++++||.|++++ |||||+|+| 
T Consensus       205 ~~~~~~~~~~~~~~m~-~~gG~IVniSSi~~~----~~~p~~-~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaP-  277 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVL-AEGAQTTAFTYLGEK----ITHDIY-WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVL-  277 (405)
T ss_dssp             HHHHHHHHHHHHHTCE-EEEEEEEEEECCCCG----GGTTTT-TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEC-
T ss_pred             hHHHHHHHHHHHHhhh-hCCcEEEEEeCchhh----CcCCCc-cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEe-
Confidence            998 788887754 54 346999999966532    222111 11569999999999999999999999 999999999 


Q ss_pred             cchhhh--------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          215 YGLAMA--------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       215 ~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++|+                    ++  +|+++.++.+|  +++   ++.|+.+.+|++.|
T Consensus       278 G~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L--~sd---~l~~~~~~~D~~~~  335 (405)
T 3zu3_A          278 KAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSL--YKD---SLCGDSPHMDQEGR  335 (405)
T ss_dssp             CCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHH--HHH---TTSSSCCCBCTTSC
T ss_pred             CCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHH--Hhc---cccCCCCCcCCCcC
Confidence            888886                    11  89999999999  655   68899999999875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-36  Score=250.90  Aligned_cols=208  Identities=26%  Similarity=0.364  Sum_probs=175.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||++|||++++++|+++|++|++++|+++..++..+++..    .++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999999999998777666655532    368899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCcC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      |++|++|||||..           +.++|++++++|+.+++.+++.++|.|++++   .++||++||..+    ..+.++
T Consensus        85 g~id~lv~~Ag~~-----------~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~----~~~~~~  149 (267)
T 2gdz_A           85 GRLDILVNNAGVN-----------NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG----LMPVAQ  149 (267)
T ss_dssp             SCCCEEEECCCCC-----------CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG----TSCCTT
T ss_pred             CCCCEEEECCCCC-----------ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc----cCCCCC
Confidence            9999999998753           2357899999999999999999999997653   689999995533    222222


Q ss_pred             CCCCcccccchHHHHHHHHHH--HHHhcccCcEEeEeccCcchhhh--------------------------H--h--HH
Q 025252          177 NIPANYYGVSKFGILGLVKSL--AAELGRYGIRVDCVSHTYGLAMA--------------------------E--A--IA  224 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~l--a~e~~~~gi~v~~v~p~~~~~t~--------------------------~--~--~~  224 (255)
                      .   ..|++||++++++++.+  +.|++++|||||+|+| +.++|+                          +  +  |+
T Consensus       150 ~---~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (267)
T 2gdz_A          150 Q---PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP-GFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  225 (267)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE-SCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             C---chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEec-CcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHH
Confidence            2   67999999999999985  6899999999999999 655443                          0  1  88


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      |++..++++  +++.  +++|+++.+|||.
T Consensus       226 dvA~~v~~l--~s~~--~~~G~~~~v~gg~  251 (267)
T 2gdz_A          226 LIANGLITL--IEDD--ALNGAIMKITTSK  251 (267)
T ss_dssp             HHHHHHHHH--HHCT--TCSSCEEEEETTT
T ss_pred             HHHHHHHHH--hcCc--CCCCcEEEecCCC
Confidence            999999999  7665  4999999999974

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=3.6e-36  Score=251.35  Aligned_cols=219  Identities=25%  Similarity=0.392  Sum_probs=184.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-CcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++|+++||||++|||++++++|+++|++|++++| +.+..+++.+++.  ..++.++.+|++|+++++++++++.++
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            5688999999999999999999999999999999999 6665555555442  346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++||||+...   ..++.+.+.++|++++++|+.++++++++++|.|+ ++ ++||++||.....   .+.++  
T Consensus        97 ~~~~d~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~-~~iv~~sS~~~~~---~~~~~--  166 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEV---WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCR-RG-GRIILTSSIAAVM---TGIPN--  166 (274)
T ss_dssp             HSCEEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEE-EE-EEEEEECCGGGTC---CSCCS--
T ss_pred             cCCCCEEEECCCCCC---CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHh-hC-CEEEEEcChHhcc---CCCCC--
Confidence            999999999987654   24556789999999999999999999999999997 33 8999999554320   12222  


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------------Hh--H
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------------EA--I  223 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------------~~--~  223 (255)
                       ...|++||++++.+++.++.|++.+||++++++| +.+.|+                                 ++  +
T Consensus       167 -~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (274)
T 1ja9_A          167 -HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP-GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYP  244 (274)
T ss_dssp             -CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCH
T ss_pred             -CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEee-CcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCH
Confidence             2679999999999999999999999999999999 544321                                 11  8


Q ss_pred             HhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          224 ASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       224 ~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +|++.++.++  +++...+++|+++.+|||+
T Consensus       245 ~dva~~i~~l--~~~~~~~~~G~~~~v~gG~  273 (274)
T 1ja9_A          245 ADIGRAVSAL--CQEESEWINGQVIKLTGGG  273 (274)
T ss_dssp             HHHHHHHHHH--HSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHHH--hCcccccccCcEEEecCCc
Confidence            9999999999  7788889999999999997

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-36  Score=256.23  Aligned_cols=186  Identities=25%  Similarity=0.417  Sum_probs=164.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +.+|+++||||++|||++++++|+++|++|++++|+++.++++.+++.  ..++.++.+|++|.++++++++++.+.+|+
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            789999999999999999999999999999999999988877776653  247889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      +|+||||||...   ..++.+.+.++|++++++|+.++++++++++|.|.+++ .|+|+++||..    +..+.++.   
T Consensus       109 id~lvnnAg~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~----~~~~~~~~---  178 (301)
T 3tjr_A          109 VDVVFSNAGIVV---AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFA----GLVPNAGL---  178 (301)
T ss_dssp             CSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG----GTSCCTTB---
T ss_pred             CCEEEECCCcCC---CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchh----hcCCCCCc---
Confidence            999999988664   25667889999999999999999999999999998766 68999999543    33333333   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      ..|++||++++++++.++.|++++||+|++|+| |.++|+
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P-G~v~T~  217 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCP-MVVETK  217 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECC-SCCCSS
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEC-Cccccc
Confidence            679999999999999999999999999999999 877775

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.1e-36  Score=260.77  Aligned_cols=188  Identities=18%  Similarity=0.268  Sum_probs=154.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-----chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-----NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-----~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      |+|++|+++||||++|||++++++|+++|++|++++|+.     +..+++.+...  ..++.++.+|++|++++++++++
T Consensus         1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~   80 (324)
T 3u9l_A            1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ   80 (324)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence            457899999999999999999999999999999987762     33344433321  25789999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +.+++|++|+||||||...   ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||..+...   ..
T Consensus        81 ~~~~~g~iD~lVnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~---~~  154 (324)
T 3u9l_A           81 IIGEDGRIDVLIHNAGHMV---FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGG---TP  154 (324)
T ss_dssp             HHHHHSCCSEEEECCCCCB---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---CC
T ss_pred             HHHHcCCCCEEEECCCcCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccC---CC
Confidence            9999999999999988654   35677889999999999999999999999999998888899999996543211   11


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM  219 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t  219 (255)
                      +.   ...|++||++++++++.++.|++++||+|++|+| |.+.|
T Consensus       155 ~~---~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~P-G~v~t  195 (324)
T 3u9l_A          155 PY---LAPYFAAKAAMDAIAVQYARELSRWGIETSIIVP-GAFTS  195 (324)
T ss_dssp             SS---CHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CCC--
T ss_pred             Cc---chhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEC-Ccccc
Confidence            11   2569999999999999999999999999999999 66653

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=5.9e-36  Score=249.35  Aligned_cols=228  Identities=15%  Similarity=0.089  Sum_probs=184.8

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcC---CEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNG---AKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g---~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      .+...++++|+++||||++|||++++++|+++|   ++|++++|+.+..+++.+... ..++.++.+|+++.++++++++
T Consensus        13 ~~~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~   92 (267)
T 1sny_A           13 GLVPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVA   92 (267)
T ss_dssp             -------CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHH
Confidence            334456899999999999999999999999999   999999999765444322111 2478999999999999999999


Q ss_pred             HHHHHcC--CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------C-----CCcEEE
Q 025252           94 TTVAKFG--KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------R-----RGCILY  160 (255)
Q Consensus        94 ~~~~~~g--~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~-----~~~ii~  160 (255)
                      ++.+.++  ++|++|||||....  ..++.+.+.+++++++++|+.+++++++.++|.|+++      +     .++||+
T Consensus        93 ~~~~~~g~~~id~li~~Ag~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~  170 (267)
T 1sny_A           93 DIEGVTKDQGLNVLFNNAGIAPK--SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIIN  170 (267)
T ss_dssp             HHHHHHGGGCCSEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEE
T ss_pred             HHHHhcCCCCccEEEECCCcCCC--ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEE
Confidence            9999888  89999999876541  2456678899999999999999999999999999765      3     589999


Q ss_pred             eccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h-HHhhhhhhhhh
Q 025252          161 TTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A-IASIANAALYN  233 (255)
Q Consensus       161 is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~-~~~~~~~~~~l  233 (255)
                      +||....    .+.....+...|++||++++.+++.++.|++++||+|++|+| +.++|+.      . |++++..++++
T Consensus       171 isS~~~~----~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~a~~~~~~  245 (267)
T 1sny_A          171 MSSILGS----IQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP-GWVKTDMGGSSAPLDVPTSTGQIVQT  245 (267)
T ss_dssp             ECCGGGC----STTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC-CSBCSTTTCTTCSBCHHHHHHHHHHH
T ss_pred             Eeccccc----ccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCC-cceecCCCCCCCCCCHHHHHHHHHHH
Confidence            9955432    222111233679999999999999999999999999999999 8887762      1 89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCc
Q 025252          234 MAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        +++....++|+.+.+|||.
T Consensus       246 --~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          246 --ISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             --HHHCCGGGTTCEECTTSCB
T ss_pred             --HHhcCcCCCCcEEccCCcC
Confidence              7777788999999999984

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-35  Score=246.20  Aligned_cols=220  Identities=21%  Similarity=0.316  Sum_probs=182.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+..+++.+++.    ..++.++.+|++|+++++++++++.+.
T Consensus        29 ~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  108 (279)
T 1xg5_A           29 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ  108 (279)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999877766655542    145788999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC--CcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR--GCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~--~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++++|++|||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.  ++||++||..+...  .+.++
T Consensus       109 ~g~iD~vi~~Ag~~~---~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~--~~~~~  183 (279)
T 1xg5_A          109 HSGVDICINNAGLAR---PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV--LPLSV  183 (279)
T ss_dssp             HCCCSEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC--CSCGG
T ss_pred             CCCCCEEEECCCCCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc--CCCCC
Confidence            999999999987654   245667889999999999999999999999999987663  89999996543211  11222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~  232 (255)
                         ...|++||++++.+++.++.|++  +.||+|++|+| +.++|+                    ++  |+|++..+++
T Consensus       184 ---~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i~~  259 (279)
T 1xg5_A          184 ---THFYSATKYAVTALTEGLRQELREAQTHIRATCISP-GVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIY  259 (279)
T ss_dssp             ---GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE-SCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHH
T ss_pred             ---CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEec-CcccchhhhhhcccChhHHhhhcccccCCCHHHHHHHHHH
Confidence               25699999999999999999998  88999999999 666543                    11  8999999999


Q ss_pred             hhccCCCCCeeeceeEEecCC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      +  +++...+.+|+...-++|
T Consensus       260 l--~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          260 V--LSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             H--HHSCTTEEEEEEEEEETT
T ss_pred             H--hcCCcceEeeeEEEccCC
Confidence            9  777788888875444443

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-35  Score=250.82  Aligned_cols=222  Identities=20%  Similarity=0.185  Sum_probs=176.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCH-HHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNE-REVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~-~~~~~~~~~~~~   97 (255)
                      ..+++|+++||||++|||++++++|+++|++|++++|+.+..++..+++..   .++.++.+|++++ ++++++++++.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999998887777666532   4789999999998 999999999999


Q ss_pred             HcCCccEEEEcCCCcccc---------------------------CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh
Q 025252           98 KFGKLDILVNSGCNLEYR---------------------------GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM  150 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l  150 (255)
                      .++++|+||||||.....                           ...++.+.+.+++++++++|+.+++++++.++|.|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            999999999998865321                           12345567899999999999999999999999999


Q ss_pred             cCCCCCcEEEeccCCCcccccc-----------------------------------cCcCC-CCCcccccchHHHHHHH
Q 025252          151 VPRRRGCILYTTGTGTTACTEI-----------------------------------EGLCN-IPANYYGVSKFGILGLV  194 (255)
Q Consensus       151 ~~~~~~~ii~is~~~~~~~~~~-----------------------------------~~~~~-~~~~~Y~asKaa~~~~~  194 (255)
                      ++++.++||++||..+......                                   ...+. .+...|++||+++++++
T Consensus       168 ~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~  247 (311)
T 3o26_A          168 QLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT  247 (311)
T ss_dssp             TTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHH
T ss_pred             ccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHH
Confidence            8888899999997654321100                                   00000 12357999999999999


Q ss_pred             HHHHHHhcccCcEEeEeccCcchhhhHh-------HHhhhhhhhhhhccCCCCCeeeceeE
Q 025252          195 KSLAAELGRYGIRVDCVSHTYGLAMAEA-------IASIANAALYNMAKDDDTSYVGKQNL  248 (255)
Q Consensus       195 ~~la~e~~~~gi~v~~v~p~~~~~t~~~-------~~~~~~~~~~l~~~~~~~~~~~G~~i  248 (255)
                      +.++.|+++  |+||+|+| |.++|+..       +++.+..++.+  +.......+|..+
T Consensus       248 ~~la~e~~~--i~v~~v~P-G~v~T~~~~~~~~~~~~~~a~~~~~~--~~~~~~~~~g~~~  303 (311)
T 3o26_A          248 RVLANKIPK--FQVNCVCP-GLVKTEMNYGIGNYTAEEGAEHVVRI--ALFPDDGPSGFFY  303 (311)
T ss_dssp             HHHHHHCTT--SEEEEECC-CSBCSGGGTTCCSBCHHHHHHHHHHH--HTCCSSCCCSCEE
T ss_pred             HHHHhhcCC--ceEEEecC-CceecCCcCCCCCCCHHHHHHHHHHH--HhCCCCCCCceEe
Confidence            999999864  99999999 88888732       89999998888  4434444555544

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=3.9e-36  Score=261.75  Aligned_cols=221  Identities=14%  Similarity=0.043  Sum_probs=173.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecCcchHH---------------HHHHHhCCCceEEEEeeCCCHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLGQ---------------ALADKLGHQDVCYIHCDVSNEREV   88 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~~~~~~---------------~~~~~~~~~~~~~~~~D~~~~~~~   88 (255)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+..+               +..++. ..++..+.+|+++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~-G~~a~~i~~Dvtd~~~v  138 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA-GLYSKSINGDAFSDAAR  138 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT-TCCEEEEESCTTSHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc-CCcEEEEEecCCCHHHH
Confidence            589999999999999999999999 9999999998755321               222222 24688899999999999


Q ss_pred             HHHHHHHHHHc-CCccEEEEcCCCccc----------cCccCC---------------------CCCChHHHHHHHhhhh
Q 025252           89 INLVDTTVAKF-GKLDILVNSGCNLEY----------RGFVSI---------------------LDTPKSDLERLLAVNT  136 (255)
Q Consensus        89 ~~~~~~~~~~~-g~id~li~~a~~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n~  136 (255)
                      +++++++.+.+ |+||+||||||....          ....++                     .+.+.++|++++++|.
T Consensus       139 ~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~  218 (422)
T 3s8m_A          139 AQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMG  218 (422)
T ss_dssp             HHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhc
Confidence            99999999999 999999999875210          111233                     3679999999999999


Q ss_pred             hhHH-HHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCc
Q 025252          137 IGGF-LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTY  215 (255)
Q Consensus       137 ~~~~-~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~  215 (255)
                      .+.+ .+++.+.+.+..+++|+||++||.++....  +...   ...|++||+|+++++++||.|++++|||||+|+| |
T Consensus       219 ~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~--p~~~---~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaP-G  292 (422)
T 3s8m_A          219 GQDWELWIDALEGAGVLADGARSVAFSYIGTEITW--PIYW---HGALGKAKVDLDRTAQRLNARLAKHGGGANVAVL-K  292 (422)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH--HHHT---SHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-C
T ss_pred             hhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC--CCcc---chHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEc-C
Confidence            9987 788888765333456899999966543211  1111   1469999999999999999999999999999999 8


Q ss_pred             chhhh-----------------Hh-----HHhhhhhhhhhhccCCCCCeee-ceeEEecCCcC
Q 025252          216 GLAMA-----------------EA-----IASIANAALYNMAKDDDTSYVG-KQNLLVNGGFR  255 (255)
Q Consensus       216 ~~~t~-----------------~~-----~~~~~~~~~~l~~~~~~~~~~~-G~~i~~dgG~~  255 (255)
                      .++|+                 ++     |||+++++.+|  +++.- |.+ |+...+|++-|
T Consensus       293 ~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L--~sd~l-y~~~~~~~~~d~~~~  352 (422)
T 3s8m_A          293 SVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRL--FRERL-YRQDGQPAEVDEQNR  352 (422)
T ss_dssp             CCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHH--HHHTT-TCTTCCCCCCCTTSC
T ss_pred             CCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHH--hcchh-hccCCCCcccCCCCC
Confidence            88876                 12     89999999999  76654 554 67665888754

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=7.5e-35  Score=239.00  Aligned_cols=208  Identities=26%  Similarity=0.336  Sum_probs=170.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++|+++||||++|||++++++|+++|++|++++|+++ .         .++.++.+|++|+++++++++++ +.++++|+
T Consensus         1 ~~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~---------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~   69 (242)
T 1uay_A            1 MERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G---------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFA   69 (242)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S---------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c---------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceE
Confidence            3689999999999999999999999999999999875 1         24678999999999999999999 88899999


Q ss_pred             EEEcCCCccccCccCC-CCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---C---CcEEEeccCCCcccccccCcCC
Q 025252          105 LVNSGCNLEYRGFVSI-LDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---R---GCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus       105 li~~a~~~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~---~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +||||+.......... .+.+.+++++++++|+.+++++++.++|.|.+++   .   ++||++||...    ..+.++ 
T Consensus        70 li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~----~~~~~~-  144 (242)
T 1uay_A           70 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA----FEGQIG-  144 (242)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH----HHCCTT-
T ss_pred             EEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh----ccCCCC-
Confidence            9999876543211111 1234559999999999999999999999997654   3   39999995432    222222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~  234 (255)
                        ...|++||++++.+++.++.|++++||+|++|+| +.+.|+                     ++  |+|++++++++ 
T Consensus       145 --~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l-  220 (242)
T 1uay_A          145 --QAAYAASKGGVVALTLPAARELAGWGIRVVTVAP-GLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHI-  220 (242)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHH-
T ss_pred             --CchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEe-ccCcchhhhccchhHHHHHHhhCCCcccCCCHHHHHHHHHHH-
Confidence              3679999999999999999999999999999999 766654                     11  78999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +++  .+++|+++.+|||+.
T Consensus       221 -~~~--~~~~G~~~~v~gG~~  238 (242)
T 1uay_A          221 -LEN--PMLNGEVVRLDGALR  238 (242)
T ss_dssp             -HHC--TTCCSCEEEESTTCC
T ss_pred             -hcC--CCCCCcEEEEcCCee
Confidence             665  689999999999974

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=5.9e-35  Score=249.71  Aligned_cols=187  Identities=27%  Similarity=0.353  Sum_probs=162.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC----CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH----QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+++..    .++.++.+|++++++++++++++.+.
T Consensus         5 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   84 (319)
T 3ioy_A            5 DFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR   84 (319)
T ss_dssp             CCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence            57899999999999999999999999999999999998887776665431    27899999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEeccCCCcccccc
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~is~~~~~~~~~~  172 (255)
                      ++++|+||||||...   ..++.+.+.+++++++++|+.+++++++.++|.|.++      +.|+||++||..    +..
T Consensus        85 ~g~id~lv~nAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a----~~~  157 (319)
T 3ioy_A           85 FGPVSILCNNAGVNL---FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA----AFL  157 (319)
T ss_dssp             TCCEEEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGG----GTC
T ss_pred             CCCCCEEEECCCcCC---CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccc----ccc
Confidence            999999999988654   3567788999999999999999999999999999764      579999999544    333


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                      +.+..   ..|++||+|+++|++.++.|++++||+|++|+| +.++|+
T Consensus       158 ~~~~~---~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~P-G~v~T~  201 (319)
T 3ioy_A          158 AAGSP---GIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCP-GLVKSY  201 (319)
T ss_dssp             CCSSS---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC-CCBC--
T ss_pred             CCCCC---HHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEc-CeEccC
Confidence            33333   679999999999999999999999999999999 877775

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=3.7e-35  Score=241.88  Aligned_cols=199  Identities=21%  Similarity=0.239  Sum_probs=150.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++++|+++||||++|||++++++|++ |++|++++|+++..+++.+   ..++.++.+|+++.++ .+.+.+..+.+++
T Consensus         1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   75 (245)
T 3e9n_A            1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---IEGVEPIESDIVKEVL-EEGGVDKLKNLDH   75 (245)
T ss_dssp             -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---STTEEEEECCHHHHHH-TSSSCGGGTTCSC
T ss_pred             CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---hcCCcceecccchHHH-HHHHHHHHHhcCC
Confidence            457899999999999999999999987 9999999999887776665   2468899999998877 4445555567789


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++ |+||++||..+    ..+.++.   .
T Consensus        76 id~lv~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~----~~~~~~~---~  144 (245)
T 3e9n_A           76 VDTLVHAAAVARD---TTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAG----NGPHPGN---T  144 (245)
T ss_dssp             CSEEEECC-------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC--------------C---H
T ss_pred             CCEEEECCCcCCC---CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCccc----ccCCCCc---h
Confidence            9999999876542   4566778999999999999999999999999997654 89999995543    2233333   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------Hh--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .|++||++++++++.++.|++++||+||+|+| |.++|+                ++  |+|+++++.++  +++.
T Consensus       145 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~p~dvA~~i~~l--~~~~  217 (245)
T 3e9n_A          145 IYAASKHALRGLADAFRKEEANNGIRVSTVSP-GPTNTPMLQGLMDSQGTNFRPEIYIEPKEIANAIRFV--IDAG  217 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCC----------------CCGGGSCHHHHHHHHHHH--HTSC
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEec-CCccCchhhhhhhhhhcccccccCCCHHHHHHHHHHH--HcCC
Confidence            79999999999999999999999999999999 888776                12  99999999999  5443

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-34  Score=238.55  Aligned_cols=202  Identities=23%  Similarity=0.315  Sum_probs=172.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++..+++.+++.  ..++.++.+|++|+++++++++++.+.+
T Consensus        27 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  106 (272)
T 1yb1_A           27 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI  106 (272)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence            56899999999999999999999999999999999999877776665542  2478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||||....   .++.+.+.+++++++++|+.+++++++.++|.|++++.++||++||..+.    .+.++.  
T Consensus       107 g~iD~li~~Ag~~~~---~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~----~~~~~~--  177 (272)
T 1yb1_A          107 GDVSILVNNAGVVYT---SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGH----VSVPFL--  177 (272)
T ss_dssp             CCCSEEEECCCCCCC---CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-C----CCHHHH--
T ss_pred             CCCcEEEECCCcCCC---cchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhc----CCCCCc--
Confidence            999999999876542   44566788999999999999999999999999988788999999965432    222222  


Q ss_pred             CcccccchHHHHHHHHHHHHHhc---ccCcEEeEeccCcchhhhH----------h--HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELG---RYGIRVDCVSHTYGLAMAE----------A--IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~p~~~~~t~~----------~--~~~~~~~~~~l~  234 (255)
                       ..|++||++++.+++.++.|++   +.||+|++|+| +.++|+.          +  |+|+++.+++++
T Consensus       178 -~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~dva~~i~~~~  245 (272)
T 1yb1_A          178 -LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP-NFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGI  245 (272)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE-THHHHCSTTCTHHHHCCCCCHHHHHHHHHHHH
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeC-CcccCCccccccccccCCCCHHHHHHHHHHHH
Confidence             5699999999999999999997   67999999999 7887751          1  999999999883

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=7.9e-34  Score=236.89  Aligned_cols=220  Identities=20%  Similarity=0.191  Sum_probs=177.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++|+++||||++|||++++++|++ +|++|++++|+.+..++..+++.  ..++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 99999999999877666655542  24688999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCC-hHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc--c----
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTP-KSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI--E----  173 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~--~----  173 (255)
                      ++|++||||+.....    ..+.+ .+++++++++|+.+++++++.++|.|++  .++||++||.........  +    
T Consensus        82 ~id~li~~Ag~~~~~----~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           82 GLDVLVNNAGIAFKV----ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             SEEEEEECCCCCCCT----TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             CCCEEEECCcccccC----CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCC--CCEEEEECChhhhcccccCChhHHh
Confidence            999999998765421    12333 5899999999999999999999999864  479999996533211000  0    


Q ss_pred             ----------------------------CcCCCCCcccccchHHHHHHHHHHHHHhcc----cCcEEeEeccCcchhhhH
Q 025252          174 ----------------------------GLCNIPANYYGVSKFGILGLVKSLAAELGR----YGIRVDCVSHTYGLAMAE  221 (255)
Q Consensus       174 ----------------------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~----~gi~v~~v~p~~~~~t~~  221 (255)
                                                  .....|...|++||++++.+++.++.|+++    +||+|++|+| +.+.|+.
T Consensus       156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~P-G~v~t~~  234 (276)
T 1wma_A          156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP-GWVRTDM  234 (276)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEEC-CSBCSTT
T ss_pred             hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecC-CccccCc
Confidence                                        001123477999999999999999999988    7999999999 8888762


Q ss_pred             -----h--HHhhhhhhhhhhccCCC--CCeeeceeEEecCC
Q 025252          222 -----A--IASIANAALYNMAKDDD--TSYVGKQNLLVNGG  253 (255)
Q Consensus       222 -----~--~~~~~~~~~~l~~~~~~--~~~~~G~~i~~dgG  253 (255)
                           +  |+|++..++++  ++..  ..+++|+++. |++
T Consensus       235 ~~~~~~~~~~~~a~~~~~l--~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          235 AGPKATKSPEEGAETPVYL--ALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             TCTTCSBCHHHHTHHHHHH--HSCCTTCCCCCSCEEE-TTE
T ss_pred             CCccccCChhHhhhhHhhh--hcCcccccccCceEec-cCc
Confidence                 2  99999999999  6533  4699999887 554

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.1e-35  Score=243.65  Aligned_cols=201  Identities=17%  Similarity=0.203  Sum_probs=161.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++|++|++++|+++..++          . +.+|++++++++++++++   .+++|+||
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~----------~-~~~Dl~~~~~v~~~~~~~---~~~id~lv   67 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA----------D-LSTAEGRKQAIADVLAKC---SKGMDGLV   67 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC----------C-TTSHHHHHHHHHHHHTTC---TTCCSEEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc----------c-cccCCCCHHHHHHHHHHh---CCCCCEEE
Confidence            689999999999999999999999999999998764321          1 678999999988887633   27999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC------------
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG------------  174 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~------------  174 (255)
                      ||||....          .+.|++++++|+.++++++++++|.|++++.++||++||..+........            
T Consensus        68 ~~Ag~~~~----------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           68 LCAGLGPQ----------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             ECCCCCTT----------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             ECCCCCCC----------cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            99875431          12389999999999999999999999887789999999665431100000            


Q ss_pred             ---------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh
Q 025252          175 ---------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA  222 (255)
Q Consensus       175 ---------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~  222 (255)
                               .+..+...|++||++++.+++.++.|++++||+||+|+| +.++|+                       ++
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P-G~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAP-GATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE-CC---------------------CCCSTTSC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEee-CCCCCccchhhccchhHHHHHHhcccccCCC
Confidence                     011122679999999999999999999999999999999 666553                       01


Q ss_pred             --HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 --IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                        |+|++++++++  +++.+.+++|+++.+|||+
T Consensus       217 ~~~~dvA~~~~~l--~~~~~~~~tG~~~~vdgG~  248 (257)
T 1fjh_A          217 AEPSEMASVIAFL--MSPAASYVHGAQIVIDGGI  248 (257)
T ss_dssp             CCTHHHHHHHHHH--TSGGGTTCCSCEEEESTTH
T ss_pred             CCHHHHHHHHHHH--hCchhcCCcCCEEEECCCc
Confidence              79999999999  8888889999999999996

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=1.5e-34  Score=247.92  Aligned_cols=211  Identities=21%  Similarity=0.225  Sum_probs=169.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH---HHHHHHh-----CCCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG---QALADKL-----GHQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~---~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .+|+++||||++|||++++++|+++|++|++++|+....   .+..+..     ...++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            378999999999999999999999999998887764432   2222222     12478899999999999999999873


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                        ++++|+||||||...   ..++.+.+.++|++++++|+.+++++++.++|.|++++.++||++||..+    ..+.+.
T Consensus        81 --~g~iD~lVnnAG~~~---~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~----~~~~~~  151 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGL---LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGG----LMGLPF  151 (327)
T ss_dssp             --TSCCSEEEECCCCCC---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGG----TSCCTT
T ss_pred             --cCCCCEEEECCCcCC---CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCccc----ccCCCC
Confidence              589999999987653   24566789999999999999999999999999998777899999995432    222222


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------------
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------------  220 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------------  220 (255)
                      .   ..|++||++++++++.++.|++++||+||+|+| +.++|+                                    
T Consensus       152 ~---~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (327)
T 1jtv_A          152 N---DVYCASKFALEGLCESLAVLLLPFGVHLSLIEC-GPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR  227 (327)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             C---hHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEe-CcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhh
Confidence            2   679999999999999999999999999999999 655443                                    


Q ss_pred             Hh---HHhhhhhhhhhhccC-CCCCeeeceeE
Q 025252          221 EA---IASIANAALYNMAKD-DDTSYVGKQNL  248 (255)
Q Consensus       221 ~~---~~~~~~~~~~l~~~~-~~~~~~~G~~i  248 (255)
                      ++   |+|++..+++++... +...|++|+.+
T Consensus       228 ~~~~~pedvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          228 EAAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             hcCCCHHHHHHHHHHHHcCCCCCeEEEeCchH
Confidence            01   889999999884221 35678998764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=5.3e-34  Score=250.01  Aligned_cols=222  Identities=12%  Similarity=0.049  Sum_probs=174.9

Q ss_pred             ecCeEEEEecCCChHHHH--HHHHHHHcCCEEEEEecCcch------------HHHHHHHh--CCCceEEEEeeCCCHHH
Q 025252           24 LQGRVAIITGGASGIGAS--AAQLFHKNGAKVVIADVQDNL------------GQALADKL--GHQDVCYIHCDVSNERE   87 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~a--ia~~l~~~g~~v~~~~r~~~~------------~~~~~~~~--~~~~~~~~~~D~~~~~~   87 (255)
                      ..+|+++||||++|||++  ++++|+++|++|++++|+...            .+.+.+..  ...++.++.+|++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            579999999999999999  999999999999999987532            12222221  22468899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccc----------cCccCC---------------------CCCChHHHHHHHhhhh
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEY----------RGFVSI---------------------LDTPKSDLERLLAVNT  136 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~----------~~~~~~---------------------~~~~~~~~~~~~~~n~  136 (255)
                      ++++++++.+.+|++|+||||||....          ....++                     .+.+.++|++++++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            999999999999999999999876310          011222                     3569999999999999


Q ss_pred             hhHH-HHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccC
Q 025252          137 IGGF-LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHT  214 (255)
Q Consensus       137 ~~~~-~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~  214 (255)
                      .+.+ .+++.+.+.+...++|+||++||.++.    .+.+.+ ....|++||+|+++++++||.|+++ +|||||+|+| 
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~----~~~p~~-~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~P-  291 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSP----RTYKIY-REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVN-  291 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCG----GGTTTT-TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEEC-
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhc----CCCCcc-ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEEC-
Confidence            9888 788888765544557899999965432    221111 1156999999999999999999999 9999999999 


Q ss_pred             cchhhh-----------------Hh-----HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          215 YGLAMA-----------------EA-----IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       215 ~~~~t~-----------------~~-----~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++|+                 .+     +|++++++.+|  +++  .+.+|+.+.+|||.|
T Consensus       292 G~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L--~sd--~~~~g~~~~~D~~~~  350 (418)
T 4eue_A          292 KALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERM--FSE--KIYSNEKIQFDDKGR  350 (418)
T ss_dssp             CCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHH--HHH--TTSSSSCCCCCTTSC
T ss_pred             CcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHH--hhc--cccCCCccccCCCce
Confidence            888886                 11     78999999999  655  467899999998754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=1.6e-32  Score=231.03  Aligned_cols=200  Identities=20%  Similarity=0.253  Sum_probs=167.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ..+++|+++||||++|||++++++|+++|++|++++|+++..+++.+++   ...++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            3588999999999999999999999999999999999988777665544   2236889999999999999999999999


Q ss_pred             cCCccEEEEc-CCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~-a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|++|++||| |+...    ....+.+.+++++++++|+.++++++++++|.|+++ .|+||++||..+    ..+.++ 
T Consensus       104 ~g~iD~li~naag~~~----~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~----~~~~~~-  173 (286)
T 1xu9_A          104 MGGLDMLILNHITNTS----LNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAG----KVAYPM-  173 (286)
T ss_dssp             HTSCSEEEECCCCCCC----CCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGG----TSCCTT-
T ss_pred             cCCCCEEEECCccCCC----CccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccc----ccCCCC-
Confidence            9999999999 56543    234456899999999999999999999999998654 589999995432    223222 


Q ss_pred             CCCcccccchHHHHHHHHHHHHHh--cccCcEEeEeccCcchhhhH------------h--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAEL--GRYGIRVDCVSHTYGLAMAE------------A--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~--~~~gi~v~~v~p~~~~~t~~------------~--~~~~~~~~~~l~  234 (255)
                        ...|++||++++.+++.++.|+  ...||+|++|+| +.++|+.            .  |++++..++..+
T Consensus       174 --~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~P-g~v~t~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  243 (286)
T 1xu9_A          174 --VAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL-GLIDTETAMKAVSGIVHMQAAPKEECALEIIKGG  243 (286)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE-CCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHHH
T ss_pred             --ccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeec-CccCChhHHHhccccccCCCCCHHHHHHHHHHHH
Confidence              3679999999999999999999  678999999999 7777751            1  889998888773

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.98  E-value=2.5e-32  Score=270.05  Aligned_cols=219  Identities=18%  Similarity=0.197  Sum_probs=182.4

Q ss_pred             eeeecCeEEEEecCCCh-HHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHH----hC--CCceEEEEeeCCCHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASG-IGASAAQLFHKNGAKVVIA-DVQDNLGQALADK----LG--HQDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~g-iG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~----~~--~~~~~~~~~D~~~~~~~~~~~   92 (255)
                      .+++++|+++||||++| ||++++++|+++|++|+++ +|+.+...+..++    +.  ..++.++.+|++|.+++++++
T Consensus       670 ~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv  749 (1887)
T 2uv8_A          670 GVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  749 (1887)
T ss_dssp             CBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999998 5766655444333    32  246889999999999999999


Q ss_pred             HHHHHH-----cC-CccEEEEcCCCccccCcc-CCCCCC--hHHHHHHHhhhhhhHHHHHHHH--HHHhcCCCCCcEEEe
Q 025252           93 DTTVAK-----FG-KLDILVNSGCNLEYRGFV-SILDTP--KSDLERLLAVNTIGGFLVAKHA--ARVMVPRRRGCILYT  161 (255)
Q Consensus        93 ~~~~~~-----~g-~id~li~~a~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~ii~i  161 (255)
                      +++.+.     +| ++|+||||||....   . ++.+.+  .++|++++++|+.+++++++.+  +|.|.+++.|+||++
T Consensus       750 ~~i~~~~~~~G~G~~LDiLVNNAGi~~~---~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnI  826 (1887)
T 2uv8_A          750 EFIYDTEKNGGLGWDLDAIIPFAAIPEQ---GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPM  826 (1887)
T ss_dssp             HHHHSCTTTTSCCCCCSEEEECCCCCCC---SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEE
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCCC---CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEE
Confidence            999988     66 89999999886542   3 566677  8999999999999999999998  788877777899999


Q ss_pred             ccCCCcccccccCcCCCCCcccccchHHHHHH-HHHHHHHhcccCcEEeEeccCcchh-hh---------------H--h
Q 025252          162 TGTGTTACTEIEGLCNIPANYYGVSKFGILGL-VKSLAAELGRYGIRVDCVSHTYGLA-MA---------------E--A  222 (255)
Q Consensus       162 s~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~-~~~la~e~~~~gi~v~~v~p~~~~~-t~---------------~--~  222 (255)
                      ||..+.    .+.  .   ..|++||+++++| ++.++.|++++ |+||+|+| |.++ |+               +  +
T Consensus       827 SS~ag~----~gg--~---~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~P-G~V~tT~m~~~~~~~~~~~~~~plr~  895 (1887)
T 2uv8_A          827 SPNHGT----FGG--D---GMYSESKLSLETLFNRWHSESWANQ-LTVCGAII-GWTRGTGLMSANNIIAEGIEKMGVRT  895 (1887)
T ss_dssp             CSCTTC----SSC--B---TTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEE-CCEECC-----CCTTHHHHHTTSCCC
T ss_pred             cChHhc----cCC--C---chHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEe-cccccccccccchhHHHHHHhcCCCC
Confidence            965433    221  2   5699999999999 99999999988 99999999 7777 32               1  1


Q ss_pred             --HHhhhhhhhhhhccCCC-CCeeeceeEEec--CCcC
Q 025252          223 --IASIANAALYNMAKDDD-TSYVGKQNLLVN--GGFR  255 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~-~~~~~G~~i~~d--gG~~  255 (255)
                        |+|++..++||  +++. ..++||+.+.+|  ||+.
T Consensus       896 ~sPEEVA~avlfL--aSd~~as~iTGq~I~VDVDGG~~  931 (1887)
T 2uv8_A          896 FSQKEMAFNLLGL--LTPEVVELCQKSPVMADLNGGLQ  931 (1887)
T ss_dssp             EEHHHHHHHHHGG--GSHHHHHHHHHSCEEEEESCSTT
T ss_pred             CCHHHHHHHHHHH--hCCCccccccCcEEEEECCCCee
Confidence              89999999999  8887 789999999875  9974

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=6.9e-33  Score=266.64  Aligned_cols=219  Identities=18%  Similarity=0.206  Sum_probs=182.5

Q ss_pred             ceeeecCeEEEEecCCCh-HHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHh----C--CCceEEEEeeCCCHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASG-IGASAAQLFHKNGAKVVIA-DVQDNLGQALADKL----G--HQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~g-iG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~----~--~~~~~~~~~D~~~~~~~~~~   91 (255)
                      ..+++++|+++||||++| ||++++++|+++|++|+++ +|+.+...+..+++    .  ..++.++.+|++|.++++++
T Consensus       470 ~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaL  549 (1688)
T 2pff_A          470 XXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  549 (1688)
T ss_dssp             SCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHH
T ss_pred             cccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHH
Confidence            345689999999999998 9999999999999999998 57666555554444    1  23688899999999999999


Q ss_pred             HHHHHHH-----cC-CccEEEEcCCCccccCcc-CCCCCC--hHHHHHHHhhhhhhHHHHHHHH--HHHhcCCCCCcEEE
Q 025252           92 VDTTVAK-----FG-KLDILVNSGCNLEYRGFV-SILDTP--KSDLERLLAVNTIGGFLVAKHA--ARVMVPRRRGCILY  160 (255)
Q Consensus        92 ~~~~~~~-----~g-~id~li~~a~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--~~~l~~~~~~~ii~  160 (255)
                      ++++.+.     +| ++|+||||||....   . ++.+.+  .++|++++++|+.+++.+++.+  +|.|++++.|+||+
T Consensus       550 Ve~I~e~~~~~GfG~~IDILVNNAGI~~~---g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVn  626 (1688)
T 2pff_A          550 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQ---GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILP  626 (1688)
T ss_dssp             HHHHHSCTTSSSCCCCCCEEECCCCCCCC---SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCC
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCC---CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEE
Confidence            9999988     77 89999999886542   3 566677  8999999999999999999999  88898777789999


Q ss_pred             eccCCCcccccccCcCCCCCcccccchHHHHHH-HHHHHHHhcccCcEEeEeccCcchh-hh---------------H--
Q 025252          161 TTGTGTTACTEIEGLCNIPANYYGVSKFGILGL-VKSLAAELGRYGIRVDCVSHTYGLA-MA---------------E--  221 (255)
Q Consensus       161 is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~-~~~la~e~~~~gi~v~~v~p~~~~~-t~---------------~--  221 (255)
                      +||..+.    .+.  .   ..|++||+|+++| ++.++.|+++. |+||+|+| |.++ |+               +  
T Consensus       627 ISSiAG~----~Gg--~---saYaASKAAL~aLttrsLAeEla~~-IRVNaVaP-G~V~TT~M~~~~e~~~~~l~~iplR  695 (1688)
T 2pff_A          627 MSPNHGT----FGG--D---GMYSESKLSLETLFNRWHSESWANQ-LTVCGAII-GWTRGTGLMSANNIIAEGIEKMGVR  695 (1688)
T ss_dssp             CCSCTTT----SSC--B---TTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCC-CCCCCCSSSCTTTTCSTTTSSSSCC
T ss_pred             EEChHhc----cCC--c---hHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEE-CcCcCCcccCCchHHHHHHHhCCCC
Confidence            9965432    221  2   5699999999999 78889999887 99999999 7777 32               1  


Q ss_pred             h--HHhhhhhhhhhhccCCC-CCeeeceeEEec--CCc
Q 025252          222 A--IASIANAALYNMAKDDD-TSYVGKQNLLVN--GGF  254 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~-~~~~~G~~i~~d--gG~  254 (255)
                      .  |+|++..+++|  +++. +.++||+.+.+|  ||+
T Consensus       696 ~~sPEEVA~aIlFL--aSd~sAs~ITGq~I~VDVDGG~  731 (1688)
T 2pff_A          696 TFSQKEMAFNLLGL--LTPEVVELCQKSPVMADLNGGL  731 (1688)
T ss_dssp             CCCCCTTHHHHHHH--TSTTHHHHHTTSCCCCCCSCSG
T ss_pred             CCCHHHHHHHHHHH--hCCCccccccCcEEEEEcCCCe
Confidence            1  89999999999  8888 789999999876  996

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.97  E-value=3e-31  Score=261.97  Aligned_cols=219  Identities=20%  Similarity=0.207  Sum_probs=179.5

Q ss_pred             ceeeecCeEEEEecCCCh-HHHHHHHHHHHcCCEEEEEe-cCcchHHHH----HHHhC--CCceEEEEeeCCCHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASG-IGASAAQLFHKNGAKVVIAD-VQDNLGQAL----ADKLG--HQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~g-iG~aia~~l~~~g~~v~~~~-r~~~~~~~~----~~~~~--~~~~~~~~~D~~~~~~~~~~   91 (255)
                      +.+++++|+++||||++| ||++++++|+++|++|++++ |+.+...+.    .+++.  ..++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            335689999999999999 99999999999999999985 555544333    34443  24688999999999999999


Q ss_pred             HHHHHHH---cC-CccEEEEcCCCccccCcc-CCCCCC--hHHHHHHHhhhhhhHHHHHHH--HHHHhcCCCCCcEEEec
Q 025252           92 VDTTVAK---FG-KLDILVNSGCNLEYRGFV-SILDTP--KSDLERLLAVNTIGGFLVAKH--AARVMVPRRRGCILYTT  162 (255)
Q Consensus        92 ~~~~~~~---~g-~id~li~~a~~~~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~~~~l~~~~~~~ii~is  162 (255)
                      ++++.+.   +| ++|+||||||....   . ++.+.+  .++|++++++|+.+++++++.  ++|.|.+++.|+||++|
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~---~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnIS  802 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPEN---GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLS  802 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCT---TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEEC
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccC---CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEc
Confidence            9999988   88 99999999886542   3 567777  899999999999999999987  77888777778999999


Q ss_pred             cCCCcccccccCcCCCCCcccccchHHHHHHHHHHHH-HhcccCcEEeEeccCcchh-hh---------------H--h-
Q 025252          163 GTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA-ELGRYGIRVDCVSHTYGLA-MA---------------E--A-  222 (255)
Q Consensus       163 ~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~-e~~~~gi~v~~v~p~~~~~-t~---------------~--~-  222 (255)
                      |..+.    .+.     ...|++||+++++|++.++. |++++ |+||+|+| |.++ |+               +  . 
T Consensus       803 S~ag~----~gg-----~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaP-G~V~gT~m~~~~~~~~~~~~~~plr~~  871 (1878)
T 2uv9_A          803 PNHGT----FGN-----DGLYSESKLALETLFNRWYSESWGNY-LTICGAVI-GWTRGTGLMSANNLVAEGVEKLGVRTF  871 (1878)
T ss_dssp             SCSSS----SSC-----CSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEE-CCBCCTTSCSHHHHTHHHHHTTTCCCB
T ss_pred             chhhc----cCC-----chHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEe-cceecCcccccchhhHHHHHhcCCCCC
Confidence            65432    222     25699999999999987665 47776 99999999 7777 43               1  1 


Q ss_pred             -HHhhhhhhhhhhccCCCC-CeeeceeEEec--CCc
Q 025252          223 -IASIANAALYNMAKDDDT-SYVGKQNLLVN--GGF  254 (255)
Q Consensus       223 -~~~~~~~~~~l~~~~~~~-~~~~G~~i~~d--gG~  254 (255)
                       |+|++..+++|  +++.. .++||+.+.+|  ||+
T Consensus       872 sPeEVA~avlfL--aSd~a~s~iTGq~I~VDVDGG~  905 (1878)
T 2uv9_A          872 SQQEMAFNLLGL--MAPAIVNLCQSDPVFADLNGGL  905 (1878)
T ss_dssp             CHHHHHHHHHHH--HSHHHHHHHTTSCEEEEESCSG
T ss_pred             CHHHHHHHHHHH--hCCcccccccCcEEEEEcCCCc
Confidence             89999999999  88877 89999999875  996

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.97  E-value=1.1e-30  Score=208.65  Aligned_cols=185  Identities=17%  Similarity=0.201  Sum_probs=155.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||++|||++++++|+ +|++|++++|+++               .+.+|++++++++++++++    +++|++||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~---------------~~~~D~~~~~~~~~~~~~~----~~~d~vi~   64 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG---------------DVTVDITNIDSIKKMYEQV----GKVDAIVS   64 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS---------------SEECCTTCHHHHHHHHHHH----CCEEEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc---------------ceeeecCCHHHHHHHHHHh----CCCCEEEE
Confidence            69999999999999999999 9999999999864               4789999999999988765    78999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccch
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK  187 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asK  187 (255)
                      ||+...   ..++.+.+.+++++.+++|+.+++++++.+.|.|++  +++|+++||..    ...+.+   +...|++||
T Consensus        65 ~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~iv~~sS~~----~~~~~~---~~~~Y~~sK  132 (202)
T 3d7l_A           65 ATGSAT---FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLND--KGSFTLTTGIM----MEDPIV---QGASAAMAN  132 (202)
T ss_dssp             CCCCCC---CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE--EEEEEEECCGG----GTSCCT---TCHHHHHHH
T ss_pred             CCCCCC---CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc--CCEEEEEcchh----hcCCCC---ccHHHHHHH
Confidence            987553   245667789999999999999999999999999854  38999999543    222222   236799999


Q ss_pred             HHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------h--HHhhhhhhhhhhccCCCCCeeeceeEEec
Q 025252          188 FGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------A--IASIANAALYNMAKDDDTSYVGKQNLLVN  251 (255)
Q Consensus       188 aa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~d  251 (255)
                      ++++.+++.++.|+ ++||++++++| +.+.++.           +  ++|+++.++.+  +   ..+++|+.+.+|
T Consensus       133 ~~~~~~~~~~~~e~-~~gi~v~~v~p-g~v~~~~~~~~~~~~~~~~~~~~dva~~~~~~--~---~~~~~G~~~~vd  202 (202)
T 3d7l_A          133 GAVTAFAKSAAIEM-PRGIRINTVSP-NVLEESWDKLEPFFEGFLPVPAAKVARAFEKS--V---FGAQTGESYQVY  202 (202)
T ss_dssp             HHHHHHHHHHTTSC-STTCEEEEEEE-CCBGGGHHHHGGGSTTCCCBCHHHHHHHHHHH--H---HSCCCSCEEEEC
T ss_pred             HHHHHHHHHHHHHc-cCCeEEEEEec-CccCCchhhhhhhccccCCCCHHHHHHHHHHh--h---hccccCceEecC
Confidence            99999999999999 78999999999 7776651           1  89999998877  4   347899999987

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.97  E-value=1.1e-30  Score=215.43  Aligned_cols=201  Identities=22%  Similarity=0.224  Sum_probs=161.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+..+.           .+.+|++++++++++++++   .+++|++|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----------~~~~D~~~~~~~~~~~~~~---~~~~d~vi   67 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-----------DLSTPGGRETAVAAVLDRC---GGVLDGLV   67 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-----------CTTSHHHHHHHHHHHHHHH---TTCCSEEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-----------cccCCcccHHHHHHHHHHc---CCCccEEE
Confidence            579999999999999999999999999999998764321           1678999999998888754   36899999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC------------
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG------------  174 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~------------  174 (255)
                      |||+....          .+.+++++++|+.++++++++++|.|++++.++||++||...........            
T Consensus        68 ~~Ag~~~~----------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           68 CCAGVGVT----------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             ECCCCCTT----------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             ECCCCCCc----------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            99875431          23488999999999999999999999877779999999665432210000            


Q ss_pred             -------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------H---h--
Q 025252          175 -------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------E---A--  222 (255)
Q Consensus       175 -------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~---~--  222 (255)
                             ....+...|++||++++.+++.++.+++++||++++++| +.+.++                    +   +  
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~p-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  216 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAP-GAVETPLLQASKADPRYGESTRRFVAPLGRGSE  216 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE-CCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBC
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcC-CcccchhhhhcccchhhHHHHHHHHHHhcCCCC
Confidence                   000123679999999999999999999999999999999 655443                    1   2  


Q ss_pred             HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++|++.+++++  +++...+++|+++.+|||.
T Consensus       217 ~~dva~~~~~l--~~~~~~~~~G~~~~v~gg~  246 (255)
T 2dkn_A          217 PREVAEAIAFL--LGPQASFIHGSVLFVDGGM  246 (255)
T ss_dssp             HHHHHHHHHHH--HSGGGTTCCSCEEEESTTH
T ss_pred             HHHHHHHHHHH--hCCCcccceeeEEEecCCe
Confidence            78899999999  7777778999999999995

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.97  E-value=1.1e-29  Score=203.58  Aligned_cols=187  Identities=20%  Similarity=0.233  Sum_probs=152.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||++|||++++++|+++  +|++++|+++..+++.++++.   .++.+|++|++++++++++    ++++|++|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~----~~~id~vi   71 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA---RALPADLADELEAKALLEE----AGPLDLLV   71 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC---EECCCCTTSHHHHHHHHHH----HCSEEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC---cEEEeeCCCHHHHHHHHHh----cCCCCEEE
Confidence            57999999999999999999998  999999998887777766652   7889999999999998886    68999999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      |||+...   ..++.+.+.+++++++++|+.+++++++++    ++++.++||++||...    ..+.+   +...|++|
T Consensus        72 ~~ag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~iv~~sS~~~----~~~~~---~~~~Y~~s  137 (207)
T 2yut_A           72 HAVGKAG---RASVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQKGARAVFFGAYPR----YVQVP---GFAAYAAA  137 (207)
T ss_dssp             ECCCCCC---CBCSCC---CHHHHHHHHHHHHHHHHHHHC----CEEEEEEEEEECCCHH----HHSST---TBHHHHHH
T ss_pred             ECCCcCC---CCChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcCCcEEEEEcChhh----ccCCC---CcchHHHH
Confidence            9987653   245667788999999999999999999988    3445689999995432    22222   23679999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------Hh--HHhhhhhhhhhhccCCC
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      |++++.+++.++.|++++||++++++| +.+.++          ++  ++|++..++++  +++.
T Consensus       138 K~a~~~~~~~~~~~~~~~gi~v~~v~p-g~v~t~~~~~~~~~~~~~~~~~dva~~~~~~--~~~~  199 (207)
T 2yut_A          138 KGALEAYLEAARKELLREGVHLVLVRL-PAVATGLWAPLGGPPKGALSPEEAARKVLEG--LFRE  199 (207)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEECC-CCBCSGGGGGGTSCCTTCBCHHHHHHHHHHH--HC--
T ss_pred             HHHHHHHHHHHHHHHhhhCCEEEEEec-CcccCCCccccCCCCCCCCCHHHHHHHHHHH--HhCC
Confidence            999999999999999999999999999 766654          12  99999999999  5443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.96  E-value=1.1e-28  Score=254.24  Aligned_cols=219  Identities=16%  Similarity=0.149  Sum_probs=167.4

Q ss_pred             eecCeEEEEecCCCh-HHHHHHHHHHHcCCEEEEEecCcch-----HHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASG-IGASAAQLFHKNGAKVVIADVQDNL-----GQALADKLGH--QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        23 ~~~~k~~lVtGas~g-iG~aia~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++||+++||||++| ||+++|+.|+++|++|++++|+.+.     .+++.+++..  .++..+.+|+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            379999999999999 9999999999999999999998776     5666666653  3578899999999999999999


Q ss_pred             HHH----HcCCccEEEEcCCCccc-cCc-cCCCCCChHHH----HHHHhhhhhhHHHHHHHHHHHhcCCCCCc----EEE
Q 025252           95 TVA----KFGKLDILVNSGCNLEY-RGF-VSILDTPKSDL----ERLLAVNTIGGFLVAKHAARVMVPRRRGC----ILY  160 (255)
Q Consensus        95 ~~~----~~g~id~li~~a~~~~~-~~~-~~~~~~~~~~~----~~~~~~n~~~~~~l~~~~~~~l~~~~~~~----ii~  160 (255)
                      +.+    .+|++|+||||||.... ... ....+.+.++|    +..+++|+.+++.+++.+.|.|.+++.+.    |++
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    88999999999986110 001 12222244444    44499999999999999999997665432    222


Q ss_pred             eccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHH--hcccCcEEeEeccCcchh-hh-----------------
Q 025252          161 TTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE--LGRYGIRVDCVSHTYGLA-MA-----------------  220 (255)
Q Consensus       161 is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e--~~~~gi~v~~v~p~~~~~-t~-----------------  220 (255)
                      +|    +.....+.     ...|++||+|+++|++.||.|  +++ +|+||+++| |.++ |+                 
T Consensus      2293 ~s----s~~g~~g~-----~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~P-G~v~tT~l~~~~~~~~~~~~~~~~ 2361 (3089)
T 3zen_D         2293 GS----PNRGMFGG-----DGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALI-GWTKGTGLMGQNDAIVSAVEEAGV 2361 (3089)
T ss_dssp             EC----SSTTSCSS-----CSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEEC-CCEECSTTTTTTTTTHHHHGGGSC
T ss_pred             CC----cccccCCC-----chHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEee-cccCCCcccccchhHHHHHHhcCC
Confidence            22    11111111     146999999999999999999  665 599999999 7766 32                 


Q ss_pred             -Hh-HHhhhhhhhhhhccCCCCCeee-ceeEEec--CCc
Q 025252          221 -EA-IASIANAALYNMAKDDDTSYVG-KQNLLVN--GGF  254 (255)
Q Consensus       221 -~~-~~~~~~~~~~l~~~~~~~~~~~-G~~i~~d--gG~  254 (255)
                       ++ |+|+|.+++||  +|+++.+++ |+.+.+|  ||+
T Consensus      2362 r~~~PeEIA~avlfL--aS~~a~~~~~~~p~~vdl~GG~ 2398 (3089)
T 3zen_D         2362 TTYTTDEMAAMLLDL--CTVETKVAAAGAPVKVDLTGGL 2398 (3089)
T ss_dssp             BCEEHHHHHHHHHHT--TSHHHHHHHHHSCEEEECSBSC
T ss_pred             CCCCHHHHHHHHHHH--hChhhhhHhcCCeEEEEcCCCc
Confidence             01 89999999999  898866655 5666666  987

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.95  E-value=4.7e-28  Score=219.23  Aligned_cols=194  Identities=13%  Similarity=0.147  Sum_probs=155.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEE-ecCc-------------chHHHHHHHhC--CCceEEEEeeCCCHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIA-DVQD-------------NLGQALADKLG--HQDVCYIHCDVSNERE   87 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~-~r~~-------------~~~~~~~~~~~--~~~~~~~~~D~~~~~~   87 (255)
                      .+++++||||++|||++++++|+++|++ |+++ +|+.             +..+++.+++.  ..++.++.||++|+++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            6889999999999999999999999997 6677 8873             33444444442  2478999999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCC
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGT  166 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~  166 (255)
                      ++++++++. .+++||++|||||....   ..+.+.+.+++++++++|+.+++++.+.+.+.+++++ .++||++||.. 
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~---~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a-  404 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDS---EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVA-  404 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCC---CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGG-
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCC---CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHH-
Confidence            999999988 68999999999887652   5677889999999999999999999999999997766 68999999543 


Q ss_pred             cccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH-----------------h-HHhhhh
Q 025252          167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE-----------------A-IASIAN  228 (255)
Q Consensus       167 ~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~-----------------~-~~~~~~  228 (255)
                         +..+.++.   ..|++||+++++|    +++++.+||+|++|+| +.++|+.                 + |++.+.
T Consensus       405 ---~~~g~~g~---~~YaaaKa~l~~l----A~~~~~~gi~v~sI~p-G~~~tgm~~~~~~~~~~~~~g~~~l~pee~a~  473 (525)
T 3qp9_A          405 ---AIWGGAGQ---GAYAAGTAFLDAL----AGQHRADGPTVTSVAW-SPWEGSRVTEGATGERLRRLGLRPLAPATALT  473 (525)
T ss_dssp             ---GTTCCTTC---HHHHHHHHHHHHH----HTSCCSSCCEEEEEEE-CCBTTSGGGSSHHHHHHHHTTBCCBCHHHHHH
T ss_pred             ---HcCCCCCC---HHHHHHHHHHHHH----HHHHHhCCCCEEEEEC-CccccccccchhhHHHHHhcCCCCCCHHHHHH
Confidence               33344433   7799999999876    5677888999999999 6666541                 2 888888


Q ss_pred             hhhhhh
Q 025252          229 AALYNM  234 (255)
Q Consensus       229 ~~~~l~  234 (255)
                      .+..++
T Consensus       474 ~l~~~l  479 (525)
T 3qp9_A          474 ALDTAL  479 (525)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888883

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.94  E-value=3.3e-26  Score=187.01  Aligned_cols=199  Identities=13%  Similarity=0.135  Sum_probs=144.8

Q ss_pred             ccCcccCccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCce-EEEEeeCCCHHHHH
Q 025252           11 DNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDV-CYIHCDVSNEREVI   89 (255)
Q Consensus        11 ~~~~~~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~   89 (255)
                      .+...+..+...++++|+++||||+|+||++++++|+++|++|++++|+++..+++.+    .++ .++.+|++      
T Consensus         6 ~~~~~~~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~~~~~~~~~Dl~------   75 (236)
T 3e8x_A            6 HHHHHSSGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----RGASDIVVANLE------   75 (236)
T ss_dssp             ---------------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----TTCSEEEECCTT------
T ss_pred             ccccccccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----CCCceEEEcccH------
Confidence            3444555666678999999999999999999999999999999999999887766554    267 89999998      


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC  169 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~  169 (255)
                         +++.+.++++|++||||+...           .+++++.+++|+.++.++++++.+    .+.++||++||.+....
T Consensus        76 ---~~~~~~~~~~D~vi~~ag~~~-----------~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~  137 (236)
T 3e8x_A           76 ---EDFSHAFASIDAVVFAAGSGP-----------HTGADKTILIDLWGAIKTIQEAEK----RGIKRFIMVSSVGTVDP  137 (236)
T ss_dssp             ---SCCGGGGTTCSEEEECCCCCT-----------TSCHHHHHHTTTHHHHHHHHHHHH----HTCCEEEEECCTTCSCG
T ss_pred             ---HHHHHHHcCCCEEEECCCCCC-----------CCCccccchhhHHHHHHHHHHHHH----cCCCEEEEEecCCCCCC
Confidence               233445568999999987432           246788999999999999999854    34679999997554322


Q ss_pred             ccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------Hh--HHhhhhhhh
Q 025252          170 TEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------EA--IASIANAAL  231 (255)
Q Consensus       170 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~~--~~~~~~~~~  231 (255)
                      ...+    .+...|+.+|++++.+.+       ..|++++++.| +.+.++                ++  ++|++.++.
T Consensus       138 ~~~~----~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrp-g~v~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~  205 (236)
T 3e8x_A          138 DQGP----MNMRHYLVAKRLADDELK-------RSSLDYTIVRP-GPLSNEESTGKVTVSPHFSEITRSITRHDVAKVIA  205 (236)
T ss_dssp             GGSC----GGGHHHHHHHHHHHHHHH-------HSSSEEEEEEE-CSEECSCCCSEEEEESSCSCCCCCEEHHHHHHHHH
T ss_pred             CCCh----hhhhhHHHHHHHHHHHHH-------HCCCCEEEEeC-CcccCCCCCCeEEeccCCCcccCcEeHHHHHHHHH
Confidence            1111    223679999999998865       57999999999 655443                11  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      ++  +++..  .+|+.+.+++|
T Consensus       206 ~~--~~~~~--~~g~~~~v~~~  223 (236)
T 3e8x_A          206 EL--VDQQH--TIGKTFEVLNG  223 (236)
T ss_dssp             HH--TTCGG--GTTEEEEEEEC
T ss_pred             HH--hcCcc--ccCCeEEEeCC
Confidence            99  55443  78999999877

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.93  E-value=8.2e-26  Score=202.68  Aligned_cols=189  Identities=14%  Similarity=0.151  Sum_probs=148.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCc---chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQD---NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++||||++|||++++++|+++|+ +|++++|+.   +..+++.+++.  ..++.++.||++|+++++++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999998 788889874   23445544442  257899999999999999999998766 


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +++|++|||||....  ...+.+.+.++|++++++|+.+++++.+.+.+.    ..++||++||    ..+..+.++.  
T Consensus       318 g~ld~vVh~AGv~~~--~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~~~~iV~~SS----~a~~~g~~g~--  385 (496)
T 3mje_A          318 APLTAVFHSAGVAHD--DAPVADLTLGQLDALMRAKLTAARHLHELTADL----DLDAFVLFSS----GAAVWGSGGQ--  385 (496)
T ss_dssp             SCEEEEEECCCCCCS--CCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----CCSEEEEEEE----HHHHTTCTTC--
T ss_pred             CCCeEEEECCcccCC--CCCcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----CCCEEEEEeC----hHhcCCCCCc--
Confidence            789999999887521  256788899999999999999999998877653    4678999994    4444444443  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------Hh-HHhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------EA-IASIANAALYN  233 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~~-~~~~~~~~~~l  233 (255)
                       ..|++||+++++|++.    ++.+||++++|+| +.+.+.                  .+ |++....+..+
T Consensus       386 -~~YaAaKa~ldala~~----~~~~Gi~v~sV~p-G~w~~~gm~~~~~~~~~l~~~g~~~l~pe~~~~~l~~~  452 (496)
T 3mje_A          386 -PGYAAANAYLDALAEH----RRSLGLTASSVAW-GTWGEVGMATDPEVHDRLVRQGVLAMEPEHALGALDQM  452 (496)
T ss_dssp             -HHHHHHHHHHHHHHHH----HHHTTCCCEEEEE-CEESSSCC------CHHHHHTTEEEECHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHH----HHhcCCeEEEEEC-CcccCCccccChHHHHHHHhcCCCCCCHHHHHHHHHHH
Confidence             7799999999887764    4557999999999 544322                  11 77777777766

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.92  E-value=2.1e-25  Score=210.73  Aligned_cols=174  Identities=14%  Similarity=0.214  Sum_probs=144.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHH-HcCC-EEEEEecC---cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFH-KNGA-KVVIADVQ---DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~-~~g~-~v~~~~r~---~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .+|+++||||++|||+++++.|+ ++|+ +|++++|+   .+..+++.+++.  ..++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            68999999999999999999999 7998 59999998   344555555543  35788999999999999999999877


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      .+ +||++|||||....   ..+.+.+.++|++++++|+.+++++.+++.|.|      +||++||.    .+..+.++.
T Consensus       609 ~~-~id~lVnnAGv~~~---~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l------~iV~~SS~----ag~~g~~g~  674 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDD---GVSESLTVERLDQVLRPKVDGARNLLELIDPDV------ALVLFSSV----SGVLGSGGQ  674 (795)
T ss_dssp             TS-CEEEEEECCCCCCC---CCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS------EEEEEEET----HHHHTCSSC
T ss_pred             hC-CCEEEEECCCcCCC---CchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC------EEEEEccH----HhcCCCCCC
Confidence            76 89999999887653   567788999999999999999999999997776      79999944    334444444


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~  220 (255)
                         ..|++||+    |++.|+++++++||++|+|+| |.+.+.
T Consensus       675 ---~~YaAaka----~~~alA~~~~~~Gi~v~sI~p-G~v~t~  709 (795)
T 3slk_A          675 ---GNYAAANS----FLDALAQQRQSRGLPTRSLAW-GPWAEH  709 (795)
T ss_dssp             ---HHHHHHHH----HHHHHHHHHHHTTCCEEEEEE-CCCSCC
T ss_pred             ---HHHHHHHH----HHHHHHHHHHHcCCeEEEEEC-CeECcc
Confidence               77999995    677788888889999999999 666553

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.92  E-value=1.8e-24  Score=180.04  Aligned_cols=177  Identities=17%  Similarity=0.164  Sum_probs=136.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |++|+++||||+|+||++++++|+++|++|++++|++....       ..++.++.+|++|+++++++++       ++|
T Consensus         1 m~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            1 MAMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             CCEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            35689999999999999999999999999999999876532       3578999999999999888776       789


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNI  178 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~  178 (255)
                      ++||||+..           +.+.|++++++|+.+++++++++.+    .+.++||++||.........     ...+..
T Consensus        67 ~vi~~Ag~~-----------~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~  131 (267)
T 3rft_A           67 GIVHLGGIS-----------VEKPFEQILQGNIIGLYNLYEAARA----HGQPRIVFASSNHTIGYYPQTERLGPDVPAR  131 (267)
T ss_dssp             EEEECCSCC-----------SCCCHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEEEEGGGGTTSBTTSCBCTTSCCC
T ss_pred             EEEECCCCc-----------CcCCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEcchHHhCCCCCCCCCCCCCCCC
Confidence            999998752           2346789999999999999999954    35689999997654421111     112234


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh-----hhHh-----HHhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-----MAEA-----IASIANAALYN  233 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-----t~~~-----~~~~~~~~~~l  233 (255)
                      |...|++||++.+.+++.++.++   |+++++|.| +.+.     ++..     +++++..+..+
T Consensus       132 ~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~-~~v~~~~~~~~~~~~~~~~~d~a~~~~~~  192 (267)
T 3rft_A          132 PDGLYGVSKCFGENLARMYFDKF---GQETALVRI-GSCTPEPNNYRMLSTWFSHDDFVSLIEAV  192 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEE-CBCSSSCCSTTHHHHBCCHHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEe-ecccCCCCCCCceeeEEcHHHHHHHHHHH
Confidence            55789999999999999999885   666666666 3332     2211     77777777666

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.90  E-value=1.9e-23  Score=180.69  Aligned_cols=206  Identities=16%  Similarity=0.149  Sum_probs=151.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKN-GAKVVIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +++||||+|+||++++++|+++ |++|++++|+.  ...+.+.+.....++.++.+|++|++++++++++.     ++|+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCE
Confidence            5999999999999999999998 79999999865  22222211111247889999999999999888763     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-----CCcEEEeccCCCccccc--------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-----RGCILYTTGTGTTACTE--------  171 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----~~~ii~is~~~~~~~~~--------  171 (255)
                      +||+|+....       +.+.+++++++++|+.++.++++++.+.|..-+     .++||++||.+......        
T Consensus        77 vih~A~~~~~-------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           77 VMHLAAESHV-------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEECCSCCCH-------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEECCCCcCh-------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            9999875431       124466788999999999999999999874211     35899999764332111        


Q ss_pred             ------ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------
Q 025252          172 ------IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------  220 (255)
Q Consensus       172 ------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------  220 (255)
                            ....+..|...|+.||++.+.+++.++.++   |++++++.| +.+.++                         
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNC-SNNYGPYHFPEKLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEE-CEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEee-ceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence                  011123455789999999999999999885   799999998 433221                         


Q ss_pred             ------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          221 ------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       221 ------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                            ++  ++|++.+++++  +++.   .+|+++.+++|.
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~--~~~~---~~g~~~~v~~~~  262 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMV--VTEG---KAGETYNIGGHN  262 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHH--HHHC---CTTCEEEECCCC
T ss_pred             CCceeEeeEEHHHHHHHHHHH--HhCC---CCCCEEEecCCC
Confidence                  11  78899998888  4332   479999999874

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.90  E-value=4.4e-23  Score=176.66  Aligned_cols=205  Identities=17%  Similarity=0.125  Sum_probs=148.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |++++++||||+|+||++++++|+++|  ++|++++|+..  ..+.+.+.....++.++.+|++|++++++++.      
T Consensus         1 M~~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            1 MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCCCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh------
Confidence            345679999999999999999999997  89999998642  12222111113478899999999999888762      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCc
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGL  175 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~  175 (255)
                       ++|++||+|+....       +.+.++++..+++|+.++.++++++.+.   ...++||++||.+......    ....
T Consensus        75 -~~d~vih~A~~~~~-------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~E~~  143 (336)
T 2hun_A           75 -KVDGVVHLAAESHV-------DRSISSPEIFLHSNVIGTYTLLESIRRE---NPEVRFVHVSTDEVYGDILKGSFTEND  143 (336)
T ss_dssp             -TCSEEEECCCCCCH-------HHHHHCTHHHHHHHHHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCCCSSSCBCTTB
T ss_pred             -CCCEEEECCCCcCh-------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCcEEEEeccHHHHCCCCCCCcCCCC
Confidence             79999999875431       1234567889999999999999999886   2247899999764332110    0111


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--  222 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--  222 (255)
                      +..|...|+.||++.+.+++.++.+   .|++++++.| +.+.++                               ++  
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  219 (336)
T 2hun_A          144 RLMPSSPYSATKAASDMLVLGWTRT---YNLNASITRC-TNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLY  219 (336)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---TTCEEEEEEE-CEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEE
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEee-eeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEE
Confidence            2334578999999999999999987   4799999998 433221                               11  


Q ss_pred             HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++|++.++..+  +.+.   .+|+++.+++|.
T Consensus       220 v~Dva~~~~~~--~~~~---~~g~~~~v~~~~  246 (336)
T 2hun_A          220 VEDHVRAIELV--LLKG---ESREIYNISAGE  246 (336)
T ss_dssp             HHHHHHHHHHH--HHHC---CTTCEEEECCSC
T ss_pred             HHHHHHHHHHH--HhCC---CCCCEEEeCCCC
Confidence            78889988887  4332   378999999874

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.90  E-value=2.5e-23  Score=179.38  Aligned_cols=197  Identities=14%  Similarity=0.128  Sum_probs=154.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHc-CC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKN-GA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~-g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+++|+++||||+|+||++++++|+++ |+ +|++++|++....++.+++...++.++.+|++|+++++++++       
T Consensus        18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-------   90 (344)
T 2gn4_A           18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALE-------   90 (344)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTT-------
T ss_pred             hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHh-------
Confidence            378899999999999999999999999 97 999999998877777777665689999999999998877664       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||+|+....+       .......+.+++|+.++.++++++.+.    +.+++|++||..    ..      .|.
T Consensus        91 ~~D~Vih~Aa~~~~~-------~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~v~~~V~~SS~~----~~------~p~  149 (344)
T 2gn4_A           91 GVDICIHAAALKHVP-------IAEYNPLECIKTNIMGASNVINACLKN----AISQVIALSTDK----AA------NPI  149 (344)
T ss_dssp             TCSEEEECCCCCCHH-------HHHHSHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGG----GS------SCC
T ss_pred             cCCEEEECCCCCCCC-------chhcCHHHHHHHHHHHHHHHHHHHHhC----CCCEEEEecCCc----cC------CCc
Confidence            799999998654311       123345688999999999999999874    457899999532    21      233


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------Hh--HHhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------EA--IASIANAA  230 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~~--~~~~~~~~  230 (255)
                      ..|++||++.+.+++.++.++++.|++++++.| +.+.++                            .+  ++|+++++
T Consensus       150 ~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRp-g~v~g~~~~~i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v  228 (344)
T 2gn4_A          150 NLYGATKLCSDKLFVSANNFKGSSQTQFSVVRY-GNVVGSRGSVVPFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFV  228 (344)
T ss_dssp             SHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECC-CEETTCTTSHHHHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEe-ccEECCCCCHHHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHH
Confidence            679999999999999999988889999999999 433221                            11  68888888


Q ss_pred             hhhhccCCCCCeeeceeEEecCC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      +.+  +...   ..|+++.++++
T Consensus       229 ~~~--l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          229 LKS--LKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHH--HHHC---CSSCEEEECCC
T ss_pred             HHH--Hhhc---cCCCEEecCCC
Confidence            777  3322   24677766654

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.90  E-value=8.8e-23  Score=175.09  Aligned_cols=176  Identities=19%  Similarity=0.127  Sum_probs=131.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH-HHHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ-ALADKL-GHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |++|+++||||+|+||++++++|+++|++|++++|+.+... +..+.+ ...++.++.+|++|+++++++++.+     +
T Consensus         1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   75 (345)
T 2z1m_A            1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----Q   75 (345)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----C
Confidence            46789999999999999999999999999999999876432 112222 2246888999999999999988876     7


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCN  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~  177 (255)
                      +|++||+|+....       +.+.++++..+++|+.++.++++++.+.   ...++||++||........    ....+.
T Consensus        76 ~d~vih~A~~~~~-------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~  145 (345)
T 2z1m_A           76 PDEVYNLAAQSFV-------GVSFEQPILTAEVDAIGVLRILEALRTV---KPDTKFYQASTSEMFGKVQEIPQTEKTPF  145 (345)
T ss_dssp             CSEEEECCCCCCH-------HHHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             CCEEEECCCCcch-------hhhhhCHHHHHHHHHHHHHHHHHHHHHh---CCCceEEEEechhhcCCCCCCCCCccCCC
Confidence            9999999875421       1234568889999999999999999853   1147899999764332111    111223


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhc---ccCcEEeEeccC
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELG---RYGIRVDCVSHT  214 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~---~~gi~v~~v~p~  214 (255)
                      .|...|+.||++.+.+++.++.++.   ..++.++.+.||
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg  185 (345)
T 2z1m_A          146 YPRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPL  185 (345)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTT
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCC
Confidence            4457899999999999999999875   344567778883

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.90  E-value=2.6e-23  Score=186.76  Aligned_cols=190  Identities=15%  Similarity=0.180  Sum_probs=147.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcc---hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDN---LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++||||++|||++++++|+++|++ |++++|+..   ..+++.+++.  ..++.++.||++|+++++++++++ +.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5789999999999999999999999995 999999864   3344444332  247889999999999999999988 55


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++++|++|||||....   ..+.+.+.+++++++++|+.+++++.+.+.+    .+.++||++||.    ....+.++. 
T Consensus       304 ~g~ld~VIh~AG~~~~---~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~~~~~V~~SS~----a~~~g~~g~-  371 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDD---GTVDTLTGERIERASRAKVLGARNLHELTRE----LDLTAFVLFSSF----ASAFGAPGL-  371 (486)
T ss_dssp             TSCEEEEEECCCCCCC---CCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SCCSEEEEEEEH----HHHTCCTTC-
T ss_pred             cCCCcEEEECCccCCC---CccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CCCCEEEEEcCh----HhcCCCCCC-
Confidence            6899999999886542   4566789999999999999999999987743    356889999944    333333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh-HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA-IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~-~~~~~~~~~~l~  234 (255)
                        ..|+++|++++.|++.    ++..|+++++|+| +.+.+.                 .+ +++.+..+...+
T Consensus       372 --~~Yaaaka~l~~la~~----~~~~gi~v~~i~p-G~~~~~gm~~~~~~~~~~~~g~~~i~~e~~a~~l~~~l  438 (486)
T 2fr1_A          372 --GGYAPGNAYLDGLAQQ----RRSDGLPATAVAW-GTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNAL  438 (486)
T ss_dssp             --TTTHHHHHHHHHHHHH----HHHTTCCCEEEEE-CCBC------------CTTTTEECBCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHH----HHhcCCeEEEEEC-CeeCCCcccchhHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence              6799999999987654    4457999999999 544332                 11 788888877773

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.90  E-value=1.6e-22  Score=173.71  Aligned_cols=206  Identities=15%  Similarity=0.140  Sum_probs=150.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||+|+||++++++|+++|++|++++|+. ....+..+.+. ..++.++.+|++|+++++++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            5799999999999999999999999999999853 22222222221 246889999999999999888752     6999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-------------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-------------  171 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-------------  171 (255)
                      +||+|+....       +.+.++++..+++|+.++.++++++.+...   +++||++||.+......             
T Consensus        77 vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~---~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~  146 (347)
T 1orr_A           77 CFHLAGQVAM-------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS---NCNIIYSSTNKVYGDLEQYKYNETETRYTC  146 (347)
T ss_dssp             EEECCCCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT---TCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             EEECCcccCh-------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CceEEEeccHHHhCCCCcCCcccccccccc
Confidence            9999875321       123567788999999999999999988752   36899999765432110             


Q ss_pred             -------ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------H--
Q 025252          172 -------IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------E--  221 (255)
Q Consensus       172 -------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~--  221 (255)
                             ....+..|...|+.||++.+.+++.++.++   |++++++.| +.+.++                     .  
T Consensus       147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~  222 (347)
T 1orr_A          147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRH-SSMYGGRQFATYDQGWVGWFCQKAVEIKNG  222 (347)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE-CCEECTTCCCBTTBCHHHHHHHHHHHHHTT
T ss_pred             cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEcc-CceeCcCCCCCCcCcHHHHHHHHHHhCccc
Confidence                   001122355789999999999999999884   899999998 433221                     0  


Q ss_pred             ----------------h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          222 ----------------A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       222 ----------------~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                                      +  ++|++.++..+  +.. ....+|+++.++||.
T Consensus       223 ~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~--~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          223 INKPFTISGNGKQVRDVLHAEDMISLYFTA--LAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCCCEEEESSSCCEEECEEHHHHHHHHHHH--HHT-HHHHTTCEEEESSCG
T ss_pred             CCCCeEEecCCcceEeeEEHHHHHHHHHHH--Hhc-cccCCCCEEEeCCCC
Confidence                            1  67777787777  432 235679999999873

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.89  E-value=9.9e-23  Score=174.43  Aligned_cols=206  Identities=16%  Similarity=0.134  Sum_probs=150.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +..++++|+++||||+|+||++++++|+++|++|++++|+.....+..+.+  .++.++.+|++|.++++++++++    
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l--~~v~~~~~Dl~d~~~~~~~~~~~----   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV--AGLSVIEGSVTDAGLLERAFDSF----   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC--TTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc--CCceEEEeeCCCHHHHHHHHhhc----
Confidence            335578999999999999999999999999999999999754332211222  46889999999999999888865    


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---cCcC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EGLC  176 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~~~~  176 (255)
                       ++|++||+|+....       . +.++++  +++|+.++.++++++.+    .+.++||++||.+.......   +...
T Consensus        88 -~~D~vih~A~~~~~-------~-~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~~~~~~~~~~~~E  152 (330)
T 2pzm_A           88 -KPTHVVHSAAAYKD-------P-DDWAED--AATNVQGSINVAKAASK----AGVKRLLNFQTALCYGRPATVPIPIDS  152 (330)
T ss_dssp             -CCSEEEECCCCCSC-------T-TCHHHH--HHHHTHHHHHHHHHHHH----HTCSEEEEEEEGGGGCSCSSSSBCTTC
T ss_pred             -CCCEEEECCccCCC-------c-cccChh--HHHHHHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCccCCCCcCC
Confidence             79999999875431       1 445565  99999999999999974    24578999997654322110   0000


Q ss_pred             C-CCCcccccchHHHHHHHHHHHHHhcccCcE-EeEeccCc---chhh-----------------hHh--HHhhhh-hhh
Q 025252          177 N-IPANYYGVSKFGILGLVKSLAAELGRYGIR-VDCVSHTY---GLAM-----------------AEA--IASIAN-AAL  231 (255)
Q Consensus       177 ~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~p~~---~~~t-----------------~~~--~~~~~~-~~~  231 (255)
                      . .|...|+.||++.+.+++.+  ++....|| ++.+.|+.   .+..                 .++  ++|++. ++.
T Consensus       153 ~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~a~~  230 (330)
T 2pzm_A          153 PTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQKCFCSDTVRDFLDMSDFLAIADL  230 (330)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTCCSSHHHHHHHHHHTTCCCCEESCEECEEEHHHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCCEEeCCCCEecceeHHHHHHHHHH
Confidence            0 14578999999999999887  56666788 77888842   1100                 012  889999 888


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +++..    |+++.+++|.
T Consensus       231 ~~--~~~~~----g~~~~v~~~~  247 (330)
T 2pzm_A          231 SL--QEGRP----TGVFNVSTGE  247 (330)
T ss_dssp             HT--STTCC----CEEEEESCSC
T ss_pred             HH--hhcCC----CCEEEeCCCC
Confidence            88  55432    8999999874

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.89  E-value=1.1e-22  Score=174.59  Aligned_cols=171  Identities=19%  Similarity=0.190  Sum_probs=128.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+|+++||||+|+||++++++|+++|++|++++|+.+...+..+++   ...++.++.+|++|++++++++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4678999999999999999999999999999999866544433332   124788999999999999998876     48


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCcCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGLCN  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~~~  177 (255)
                      +|++||+|+.....       ...+..++.+++|+.++.++++++.+    .+.++||++||.+.......    .....
T Consensus        79 ~d~vih~A~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~  147 (341)
T 3enk_A           79 ITAAIHFAALKAVG-------ESVAKPIEYYRNNLDSLLSLLRVMRE----RAVKRIVFSSSATVYGVPERSPIDETFPL  147 (341)
T ss_dssp             CCEEEECCCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGBCSCSSSSBCTTSCC
T ss_pred             CcEEEECccccccC-------ccccChHHHHHHHHHHHHHHHHHHHh----CCCCEEEEEecceEecCCCCCCCCCCCCC
Confidence            99999998754321       13345567889999999988877643    45679999997654422110    11222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .|.+.|+.||++.+.+++.++.++.  +++++++.|
T Consensus       148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp  181 (341)
T 3enk_A          148 SATNPYGQTKLMAEQILRDVEAADP--SWRVATLRY  181 (341)
T ss_dssp             BCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEee
Confidence            3457899999999999999998853  478888876

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.89  E-value=2.9e-22  Score=170.53  Aligned_cols=199  Identities=17%  Similarity=0.125  Sum_probs=147.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+.|+++||||+|+||++++++|+++|++|++++|+... ..    +   ++.++.+|++|+++++++++.     +++|
T Consensus        10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l---~~~~~~~Dl~d~~~~~~~~~~-----~~~d   76 (321)
T 2pk3_A           10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P---NVEMISLDIMDSQRVKKVISD-----IKPD   76 (321)
T ss_dssp             ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T---TEEEEECCTTCHHHHHHHHHH-----HCCS
T ss_pred             cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c---eeeEEECCCCCHHHHHHHHHh-----cCCC
Confidence            466789999999999999999999999999999998654 11    1   578899999999999988875     3799


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc------cccCcCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT------EIEGLCN  177 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~------~~~~~~~  177 (255)
                      ++||+|+....       +.+.++++..+++|+.++.++++++ +.+  ++.++||++||.......      .......
T Consensus        77 ~vih~A~~~~~-------~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~--~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~  146 (321)
T 2pk3_A           77 YIFHLAAKSSV-------KDSWLNKKGTFSTNVFGTLHVLDAV-RDS--NLDCRILTIGSSEEYGMILPEESPVSEENQL  146 (321)
T ss_dssp             EEEECCSCCCH-------HHHTTCHHHHHHHHHHHHHHHHHHH-HHH--TCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred             EEEEcCcccch-------hhhhhcHHHHHHHHHHHHHHHHHHH-HHh--CCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence            99999875431       1233467889999999999999999 555  246789999976543221      0011122


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh-------------------------h-----------H
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM-------------------------A-----------E  221 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t-------------------------~-----------~  221 (255)
                      .|...|+.||++.+.+++.++.+   .|++++++.|+. +.+                         +           +
T Consensus       147 ~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~~-v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  222 (321)
T 2pk3_A          147 RPMSPYGVSKASVGMLARQYVKA---YGMDIIHTRTFN-HIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRD  222 (321)
T ss_dssp             BCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEECE-EECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHH---cCCCEEEEEeCc-ccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEe
Confidence            34578999999999999999987   489998888732 111                         0           1


Q ss_pred             h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          222 A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +  ++|++.++..+  +.+.   .+|+++.+++|.
T Consensus       223 ~v~v~Dva~a~~~~--~~~~---~~g~~~~i~~~~  252 (321)
T 2pk3_A          223 FTDVRDIVQAYWLL--SQYG---KTGDVYNVCSGI  252 (321)
T ss_dssp             EEEHHHHHHHHHHH--HHHC---CTTCEEEESCSC
T ss_pred             eEEHHHHHHHHHHH--HhCC---CCCCeEEeCCCC
Confidence            1  78888888877  4333   468889998874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.89  E-value=6.6e-23  Score=175.69  Aligned_cols=205  Identities=10%  Similarity=0.007  Sum_probs=149.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEE-EeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYI-HCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~-~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.+....+.+.+   ...++.++ .+|++|+++++++++     
T Consensus         8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----   82 (342)
T 1y1p_A            8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----   82 (342)
T ss_dssp             SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----
Confidence            367899999999999999999999999999999999877655544432   12468888 799999987766654     


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc------
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI------  172 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~------  172 (255)
                        ++|++||+|+....       .   +++++.+++|+.++.++++++.+.   .+.+++|++||.+.......      
T Consensus        83 --~~d~vih~A~~~~~-------~---~~~~~~~~~n~~g~~~ll~~~~~~---~~~~~iv~~SS~~~~~~~~~~~~~~~  147 (342)
T 1y1p_A           83 --GAAGVAHIASVVSF-------S---NKYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIY  147 (342)
T ss_dssp             --TCSEEEECCCCCSC-------C---SCHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCE
T ss_pred             --CCCEEEEeCCCCCC-------C---CCHHHHHHHHHHHHHHHHHHHHhC---CCCcEEEEeccHHHhcCCCCCCCCcc
Confidence              79999999875431       1   245779999999999999998752   34578999997654321110      


Q ss_pred             -cCc-----------------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------
Q 025252          173 -EGL-----------------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------  220 (255)
Q Consensus       173 -~~~-----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------  220 (255)
                       ...                 ...|.+.|+.||++.+.+++.++.++.. +++++++.| +.+.++              
T Consensus       148 ~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp-~~v~g~~~~~~~~~~~~~~~  225 (342)
T 1y1p_A          148 LDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLP-NYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             ECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEE-SEEECCCSCTTTCCCHHHHH
T ss_pred             cCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcC-CceECCCCCCCCCCccHHHH
Confidence             000                 0113367999999999999999999876 899999988 432211              


Q ss_pred             -------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 -------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 -------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                                         ++  ++|++.+++.+  +..  ...+|+.+..+|+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~--~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGC--LVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHH--HHC--TTCCSCEEEECCE
T ss_pred             HHHHHcCCCccccccCCcCCEeEHHHHHHHHHHH--HcC--cccCCceEEEeCC
Confidence                               11  78888888877  332  2356766666654

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.89  E-value=4e-22  Score=172.22  Aligned_cols=178  Identities=14%  Similarity=0.076  Sum_probs=138.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++|+++||||+|+||++++++|+++|++|++++|+.+...++.+.+. ..++.++.+|++|+++++++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            578899999999999999999999999999999998765444433332 247889999999999999888765     79


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----ccCcCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----IEGLCN  177 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~~~~~~  177 (255)
                      |++||+|+...       .+.+.++++..+++|+.++.++++++.+.   .+.+++|++||........     ......
T Consensus        82 d~vih~A~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           82 EIVFHMAAQPL-------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             SEEEECCSCCC-------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             CEEEECCCCcc-------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CCCCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence            99999986421       12245677889999999999999999763   2357899999765432211     111123


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhc------ccCcEEeEeccCcch
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELG------RYGIRVDCVSHTYGL  217 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~------~~gi~v~~v~p~~~~  217 (255)
                      .|...|+.||++.+.+++.++.++.      +.|++++++.| +.+
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp-~~v  196 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRA-GNV  196 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEEC-CCE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEee-cee
Confidence            3557899999999999999999885      45899999999 443

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.88  E-value=3.8e-22  Score=179.94  Aligned_cols=187  Identities=17%  Similarity=0.204  Sum_probs=145.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcc---hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDN---LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~---~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++||||++|||++++++|+++|+ +|++++|+..   ..+++.+++.  ..++.++.||++|++++++++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            578999999999999999999999999 6999999863   3445544443  24688999999999999998876    


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       +++|++|||||....   ..+.+.+.+++++++++|+.+++++.+.+.+.   .+.++||++||..    ...+.++. 
T Consensus       334 -~~ld~VVh~AGv~~~---~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~~~~~V~~SS~a----~~~g~~g~-  401 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDD---AVIDTLSPESFETVRGAKVCGAELLHQLTADI---KGLDAFVLFSSVT----GTWGNAGQ-  401 (511)
T ss_dssp             -SCCSEEEECCCCCCC---BCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TTCCCEEEEEEGG----GTTCCTTB-
T ss_pred             -CCCcEEEECCcccCC---cccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cCCCEEEEEeCHH----hcCCCCCC-
Confidence             689999999886542   45667899999999999999999998876432   1457899999543    23333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch-hhh----------------Hh-HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL-AMA----------------EA-IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~-~t~----------------~~-~~~~~~~~~~l~  234 (255)
                        ..|+++|++++.+++.+    +..|+++++|+| +.+ ++.                .+ +++.+..+...+
T Consensus       402 --~~YaaaKa~ld~la~~~----~~~gi~v~sv~p-G~~~~tgm~~~~~~~~~~~~g~~~l~~e~~a~~l~~al  468 (511)
T 2z5l_A          402 --GAYAAANAALDALAERR----RAAGLPATSVAW-GLWGGGGMAAGAGEESLSRRGLRAMDPDAAVDALLGAM  468 (511)
T ss_dssp             --HHHHHHHHHHHHHHHHH----HTTTCCCEEEEE-CCBCSTTCCCCHHHHHHHHHTBCCBCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHHHHHHHHHH----HHcCCcEEEEEC-CcccCCcccccccHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence              67999999999988754    457999999999 544 332                11 788888877773

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.88  E-value=6.1e-22  Score=160.06  Aligned_cols=181  Identities=9%  Similarity=-0.003  Sum_probs=133.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHH-HcCCEEEEEecCcc-hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFH-KNGAKVVIADVQDN-LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~-~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|+++||||+|+||++++++|+ ++|++|++++|+++ ..+++..  ...++.++.+|++|+++++++++       ++|
T Consensus         5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (221)
T 3r6d_A            5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII--DHERVTVIEGSFQNPGXLEQAVT-------NAE   75 (221)
T ss_dssp             CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH--TSTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc--CCCceEEEECCCCCHHHHHHHHc-------CCC
Confidence            4679999999999999999999 89999999999977 6555432  23578999999999999888775       689


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC--cCCCCCc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG--LCNIPAN  181 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~--~~~~~~~  181 (255)
                      ++||||+..                      |+.     ++.+++.+++.+.++||++||.+.........  .......
T Consensus        76 ~vv~~ag~~----------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~  128 (221)
T 3r6d_A           76 VVFVGAMES----------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLP  128 (221)
T ss_dssp             EEEESCCCC----------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred             EEEEcCCCC----------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccc
Confidence            999987632                      222     67888888777778999999765433211000  0000001


Q ss_pred             -ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------H----h--HHhhhhhhhhhhcc--CCC
Q 025252          182 -YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------E----A--IASIANAALYNMAK--DDD  239 (255)
Q Consensus       182 -~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------~----~--~~~~~~~~~~l~~~--~~~  239 (255)
                       .|+.+|.+++.+.+       ..|+++++|+| +.+.++             +    +  ++|++.+++++  +  ++.
T Consensus       129 ~~y~~~K~~~e~~~~-------~~~i~~~~vrp-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l--~~~~~~  198 (221)
T 3r6d_A          129 ISYVQGERQARNVLR-------ESNLNYTILRL-TWLYNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDI--LHAADE  198 (221)
T ss_dssp             HHHHHHHHHHHHHHH-------HSCSEEEEEEE-CEEECCTTCCCCEEECTTSCCCCCEEEHHHHHHHHHHH--HTCSCC
T ss_pred             cHHHHHHHHHHHHHH-------hCCCCEEEEec-hhhcCCCCCcceeeccCCccCCCceeeHHHHHHHHHHH--HHhcCh
Confidence             69999999998764       26999999999 544332             0    1  79999999999  7  777


Q ss_pred             CCeeeceeEEecC
Q 025252          240 TSYVGKQNLLVNG  252 (255)
Q Consensus       240 ~~~~~G~~i~~dg  252 (255)
                      ..++++.....+.
T Consensus       199 ~~~~~~~~~i~~~  211 (221)
T 3r6d_A          199 TPFHRTSIGVGEP  211 (221)
T ss_dssp             GGGTTEEEEEECT
T ss_pred             hhhhcceeeecCC
Confidence            7777766555443

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.88  E-value=1.6e-21  Score=167.76  Aligned_cols=166  Identities=14%  Similarity=0.137  Sum_probs=124.6

Q ss_pred             cCccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHH
Q 025252           16 PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        16 ~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++.+.+.+.++|+++||||+|+||++++++|+++|++|++++|+.+.          .++.++.+|++|.++++++++  
T Consensus         9 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~----------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A            9 HHSSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG----------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             ------------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS----------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             CCCCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC----------CCccEEecCcCCHHHHHHHHh--
Confidence            34455567899999999999999999999999999999999998764          367889999999999887765  


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-----
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-----  170 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-----  170 (255)
                           ++|++||+|+...         .+...++..+++|+.++.++++++.+    .+.++||++||.+.....     
T Consensus        77 -----~~d~vih~A~~~~---------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~~~~~V~~SS~~vyg~~~~~~~  138 (347)
T 4id9_A           77 -----GVSAVLHLGAFMS---------WAPADRDRMFAVNVEGTRRLLDAASA----AGVRRFVFASSGEVYPENRPEFL  138 (347)
T ss_dssp             -----TCSEEEECCCCCC---------SSGGGHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGTTTTSCSSS
T ss_pred             -----CCCEEEECCcccC---------cchhhHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEECCHHHhCCCCCCCC
Confidence                 7999999976443         23455689999999999999998865    345789999976544321     


Q ss_pred             -cccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          171 -EIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       171 -~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                       ........|...|+.+|.+.+.+++.++.+   .|++++.+.|+
T Consensus       139 ~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~  180 (347)
T 4id9_A          139 PVTEDHPLCPNSPYGLTKLLGEELVRFHQRS---GAMETVILRFS  180 (347)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---SSSEEEEEEEC
T ss_pred             CcCCCCCCCCCChHHHHHHHHHHHHHHHHHh---cCCceEEEccc
Confidence             111122345578999999999999999887   58999999994

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.88  E-value=6.8e-22  Score=170.00  Aligned_cols=208  Identities=12%  Similarity=0.100  Sum_probs=146.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +.+++|+++||||+|+||++++++|+++|  ++|++.+|...  ....+.......++.++.+|++|+++++++++..  
T Consensus        20 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   97 (346)
T 4egb_A           20 FQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKER--   97 (346)
T ss_dssp             ----CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH--
T ss_pred             cccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhc--
Confidence            34678999999999999999999999999  77888777642  2222222222357999999999999999988864  


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----c
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----I  172 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~  172 (255)
                         ++|++||+|+....       ..+.++++..+++|+.++.++++++.+.    +.+++|++||.+......     .
T Consensus        98 ---~~d~Vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vy~~~~~~~~~~  163 (346)
T 4egb_A           98 ---DVQVIVNFAAESHV-------DRSIENPIPFYDTNVIGTVTLLELVKKY----PHIKLVQVSTDEVYGSLGKTGRFT  163 (346)
T ss_dssp             ---TCCEEEECCCCC----------------CHHHHHHTHHHHHHHHHHHHS----TTSEEEEEEEGGGGCCCCSSCCBC
T ss_pred             ---CCCEEEECCcccch-------hhhhhCHHHHHHHHHHHHHHHHHHHHhc----CCCEEEEeCchHHhCCCCcCCCcC
Confidence               69999999875431       2245677889999999999999988653    456899999765433221     1


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------H
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------E  221 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~  221 (255)
                      ......|...|+.+|.+.+.+++.++.+   .|++++++.| +.+..+                               +
T Consensus       164 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
T 4egb_A          164 EETPLAPNSPYSSSKASADMIALAYYKT---YQLPVIVTRC-SNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRD  239 (346)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE-CEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEEC
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHH---hCCCEEEEee-cceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEe
Confidence            1222345578999999999999999887   4888999988 432221                               1


Q ss_pred             h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          222 A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +  ++|++.++..+  +....   .|+++.+.+|-
T Consensus       240 ~i~v~Dva~a~~~~--~~~~~---~g~~~~i~~~~  269 (346)
T 4egb_A          240 WLHVTDHCSAIDVV--LHKGR---VGEVYNIGGNN  269 (346)
T ss_dssp             EEEHHHHHHHHHHH--HHHCC---TTCEEEECCSC
T ss_pred             eEEHHHHHHHHHHH--HhcCC---CCCEEEECCCC
Confidence            1  78899998888  43332   68888888773

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.88  E-value=5.7e-23  Score=165.90  Aligned_cols=183  Identities=13%  Similarity=0.096  Sum_probs=138.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++||||+|+||++++++|+++|++|++++|+++...+.      .++.++.+|++| +++++++++       ++|++|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~D~~d~~~~~~~~~~-------~~d~vi   68 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY------NNVKAVHFDVDWTPEEMAKQLH-------GMDAII   68 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC------TTEEEEECCTTSCHHHHHTTTT-------TCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc------CCceEEEecccCCHHHHHHHHc-------CCCEEE
Confidence            599999999999999999999999999999997654321      478999999999 888777654       699999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      |+|+...               ...+++|+.++.++++++.+    .+.+++|++||.+.............|...|+.+
T Consensus        69 ~~ag~~~---------------~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~s  129 (219)
T 3dqp_A           69 NVSGSGG---------------KSLLKVDLYGAVKLMQAAEK----AEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIA  129 (219)
T ss_dssp             ECCCCTT---------------SSCCCCCCHHHHHHHHHHHH----TTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHH
T ss_pred             ECCcCCC---------------CCcEeEeHHHHHHHHHHHHH----hCCCEEEEECcccccCCCcccccccccccHHHHH
Confidence            9986543               12788999999999888853    3457899999765443221100011123679999


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEec
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVN  251 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~d  251 (255)
                      |++.+.+.+      ...|++++++.| +.+.++             ++  ++|++.++..+  +.+..  ..|+++.++
T Consensus       130 K~~~e~~~~------~~~~i~~~ilrp-~~v~g~~~~~~~~~~~~~~~~i~~~Dva~~i~~~--l~~~~--~~g~~~~i~  198 (219)
T 3dqp_A          130 KHFADLYLT------KETNLDYTIIQP-GALTEEEATGLIDINDEVSASNTIGDVADTIKEL--VMTDH--SIGKVISMH  198 (219)
T ss_dssp             HHHHHHHHH------HSCCCEEEEEEE-CSEECSCCCSEEEESSSCCCCEEHHHHHHHHHHH--HTCGG--GTTEEEEEE
T ss_pred             HHHHHHHHH------hccCCcEEEEeC-ceEecCCCCCccccCCCcCCcccHHHHHHHHHHH--HhCcc--ccCcEEEeC
Confidence            999998876      457999999999 544332             12  99999999998  54432  458999997


Q ss_pred             CC
Q 025252          252 GG  253 (255)
Q Consensus       252 gG  253 (255)
                      +|
T Consensus       199 ~g  200 (219)
T 3dqp_A          199 NG  200 (219)
T ss_dssp             EC
T ss_pred             CC
Confidence            76

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.88  E-value=1.1e-21  Score=169.14  Aligned_cols=209  Identities=17%  Similarity=0.084  Sum_probs=152.4

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLG---HQDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      .+++++|+++||||+|+||++++++|+++|++|++++|+..    ...++.+++.   ..++.++.+|++|.++++++++
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           22 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             hcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            34578899999999999999999999999999999999764    2333333332   1478899999999998877765


Q ss_pred             HHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc--
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE--  171 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~--  171 (255)
                             ++|++||+|+.....       .+.++++..+++|+.++.++++++.+.    +.+++|++||.+......  
T Consensus       102 -------~~d~vih~A~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~  163 (352)
T 1sb8_A          102 -------GVDYVLHQAALGSVP-------RSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGL  163 (352)
T ss_dssp             -------TCSEEEECCSCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCS
T ss_pred             -------CCCEEEECCcccCch-------hhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeccHHhcCCCCCC
Confidence                   799999998754311       144678889999999999999998753    457899999765433211  


Q ss_pred             --ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------
Q 025252          172 --IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------  220 (255)
Q Consensus       172 --~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------  220 (255)
                        .......|...|+.+|++.+.+++.++.++   |++++++.|+. +.++                             
T Consensus       164 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  239 (352)
T 1sb8_A          164 PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFN-VFGRRQDPNGAYAAVIPKWTSSMIQGDDVYING  239 (352)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECC-EECTTCCCCSTTCCHHHHHHHHHHHTCCCEEES
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECc-eeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeC
Confidence              011112345789999999999999999874   78888888732 2110                             


Q ss_pred             ------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          221 ------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       221 ------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                            ++  ++|++.++..+  +.. .....|+++.+.+|.
T Consensus       240 ~g~~~~~~i~v~Dva~a~~~~--~~~-~~~~~~~~~ni~~~~  278 (352)
T 1sb8_A          240 DGETSRDFCYIENTVQANLLA--ATA-GLDARNQVYNIAVGG  278 (352)
T ss_dssp             SSCCEECCEEHHHHHHHHHHH--HTC-CGGGCSEEEEESCSC
T ss_pred             CCCceEeeEEHHHHHHHHHHH--Hhc-cccCCCceEEeCCCC
Confidence                  11  77888887776  432 123568889988763

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.88  E-value=6.5e-22  Score=170.16  Aligned_cols=200  Identities=16%  Similarity=0.125  Sum_probs=146.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcch-HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNL-GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+++||||+|+||++++++|+++  |++|++++|+... ..+..+.+...++.++.+|++|+++++++++       ++|
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~d   77 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   77 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhh-------cCC
Confidence            67999999999999999999999  8999999986521 1111222333578899999999998877765       569


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc------------
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE------------  171 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~------------  171 (255)
                      ++||+|+....       +.+.++++..+++|+.++.++++++.+.    + .++|++||.+......            
T Consensus        78 ~vih~A~~~~~-------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~~~~~~~~  145 (348)
T 1oc2_A           78 AIVHYAAESHN-------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D-IRFHHVSTDEVYGDLPLREDLPGHGEGP  145 (348)
T ss_dssp             EEEECCSCCCH-------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             EEEECCcccCc-------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C-CeEEEecccceeCCCccccccccccccc
Confidence            99999875431       1234567789999999999999999875    2 3899999765332111            


Q ss_pred             ----ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------
Q 025252          172 ----IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------  220 (255)
Q Consensus       172 ----~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------  220 (255)
                          ....+..|...|+.||++.+.+++.++.++   |++++++.| +.+.++                           
T Consensus       146 ~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (348)
T 1oc2_A          146 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNC-SNNYGPYQHIEKFIPRQITNILAGIKPKLYGEG  221 (348)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE-CCEESTTCCTTSHHHHHHHHHHHTCCCEEETTS
T ss_pred             CCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEee-ceeeCCCCCccchHHHHHHHHHcCCCceEecCC
Confidence                011123355789999999999999999874   899999998 432211                           


Q ss_pred             ----Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          221 ----EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       221 ----~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                          ++  ++|++.++..+  +.+.   .+|+++.+++|.
T Consensus       222 ~~~~~~i~v~Dva~~~~~~--~~~~---~~g~~~~i~~~~  256 (348)
T 1oc2_A          222 KNVRDWIHTNDHSTGVWAI--LTKG---RMGETYLIGADG  256 (348)
T ss_dssp             CCEEECEEHHHHHHHHHHH--HHHC---CTTCEEEECCSC
T ss_pred             CceEeeEEHHHHHHHHHHH--hhCC---CCCCeEEeCCCC
Confidence                11  78899988887  4332   368999998874

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.87  E-value=9e-22  Score=170.46  Aligned_cols=205  Identities=20%  Similarity=0.203  Sum_probs=146.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHH--cCCEEEEEecCcchHHHH---------HHHhCCCceEEEEeeCCCHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHK--NGAKVVIADVQDNLGQAL---------ADKLGHQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~--~g~~v~~~~r~~~~~~~~---------~~~~~~~~~~~~~~D~~~~~~~~~   90 (255)
                      +++++|+++||||+|+||++++++|++  +|++|++++|+.......         .......++.++.+|++|++++++
T Consensus         6 ~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~   85 (362)
T 3sxp_A            6 DELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRR   85 (362)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHH
T ss_pred             hhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHH
Confidence            467899999999999999999999999  899999999976521100         011222467899999999998877


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT  170 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~  170 (255)
                      +      ...++|++||+|+...         .+.++++..+++|+.++.++++++...     +.+||++||.+.....
T Consensus        86 ~------~~~~~D~vih~A~~~~---------~~~~~~~~~~~~Nv~gt~~ll~aa~~~-----~~~~V~~SS~~vyg~~  145 (362)
T 3sxp_A           86 L------EKLHFDYLFHQAAVSD---------TTMLNQELVMKTNYQAFLNLLEIARSK-----KAKVIYASSAGVYGNT  145 (362)
T ss_dssp             H------TTSCCSEEEECCCCCG---------GGCCCHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEEEEGGGGCSC
T ss_pred             h------hccCCCEEEECCccCC---------ccccCHHHHHHHHHHHHHHHHHHHHHc-----CCcEEEeCcHHHhCCC
Confidence            6      2358999999987443         144677899999999999999998532     3459999975443322


Q ss_pred             cc---cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEE-eEeccCcchhh----h----------------------
Q 025252          171 EI---EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRV-DCVSHTYGLAM----A----------------------  220 (255)
Q Consensus       171 ~~---~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v-~~v~p~~~~~t----~----------------------  220 (255)
                      ..   ......|.+.|+.||++.+.+++.++.++.-..+|. +.+.| +...+    .                      
T Consensus       146 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  224 (362)
T 3sxp_A          146 KAPNVVGKNESPENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGP-REFYKEKTASMVLQLALGAMAFKEVKLFEFGE  224 (362)
T ss_dssp             CSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSEEST-TCGGGGGGSCHHHHHHHHHHTTSEEECSGGGC
T ss_pred             CCCCCCCCCCCCCChhHHHHHHHHHHHHHHhccCCEEEEEeCceeCc-CCCCCCcchhHHHHHHHHHHhCCCeEEECCCC
Confidence            11   112234557799999999999999988755556776 55556 32111    0                      


Q ss_pred             ---Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 ---EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 ---~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                         ++  ++|++.+++.+  +.+..   +| .+.+.+|
T Consensus       225 ~~~~~i~v~Dva~ai~~~--~~~~~---~g-~~~i~~~  256 (362)
T 3sxp_A          225 QLRDFVYIEDVIQANVKA--MKAQK---SG-VYNVGYS  256 (362)
T ss_dssp             CEEECEEHHHHHHHHHHH--TTCSS---CE-EEEESCS
T ss_pred             eEEccEEHHHHHHHHHHH--HhcCC---CC-EEEeCCC
Confidence               11  89999999988  54442   57 8888776

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.87  E-value=1.3e-22  Score=166.04  Aligned_cols=174  Identities=16%  Similarity=0.074  Sum_probs=132.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +|++|+++||||+|+||++++++|+++|+  +|++++|+++...+..    ..++.++.+|++|+++++++++       
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~----~~~~~~~~~D~~d~~~~~~~~~-------   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA----YKNVNQEVVDFEKLDDYASAFQ-------   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG----GGGCEEEECCGGGGGGGGGGGS-------
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc----cCCceEEecCcCCHHHHHHHhc-------
Confidence            46789999999999999999999999999  9999999876543221    1367889999999988776654       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++||||+...          ....++..+++|+.++.++++++.+    .+.++||++||.+...    .     +.
T Consensus        84 ~~d~vi~~ag~~~----------~~~~~~~~~~~n~~~~~~~~~~~~~----~~~~~iv~~SS~~~~~----~-----~~  140 (242)
T 2bka_A           84 GHDVGFCCLGTTR----------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGADK----S-----SN  140 (242)
T ss_dssp             SCSEEEECCCCCH----------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT----T-----CS
T ss_pred             CCCEEEECCCccc----------ccCCcccceeeeHHHHHHHHHHHHH----CCCCEEEEEccCcCCC----C-----Cc
Confidence            7999999987542          1245678999999999988887654    4567999999765432    1     22


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCc-EEeEeccCcchhhh------------------H-------h--HHhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGI-RVDCVSHTYGLAMA------------------E-------A--IASIANAALY  232 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi-~v~~v~p~~~~~t~------------------~-------~--~~~~~~~~~~  232 (255)
                      ..|+++|++++.+++.+       ++ ++++++| +.+.++                  +       +  ++|++.++++
T Consensus       141 ~~Y~~sK~~~e~~~~~~-------~~~~~~~vrp-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  212 (242)
T 2bka_A          141 FLYLQVKGEVEAKVEEL-------KFDRYSVFRP-GVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLN  212 (242)
T ss_dssp             SHHHHHHHHHHHHHHTT-------CCSEEEEEEC-CEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHhc-------CCCCeEEEcC-ceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHH
Confidence            56999999999987654       45 8999999 554332                  1       1  7888888888


Q ss_pred             hhccCCCC
Q 025252          233 NMAKDDDT  240 (255)
Q Consensus       233 l~~~~~~~  240 (255)
                      +  +++..
T Consensus       213 ~--~~~~~  218 (242)
T 2bka_A          213 N--VVRPR  218 (242)
T ss_dssp             H--HTSCC
T ss_pred             H--HhCcc
Confidence            8  55443

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.87  E-value=1.4e-21  Score=159.62  Aligned_cols=184  Identities=12%  Similarity=-0.036  Sum_probs=125.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +..|+++||||+|+||++++++|+++| ++|++++|+++...+    ....++.++.+|++|+++++++++       ++
T Consensus        21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   89 (236)
T 3qvo_A           21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK----PYPTNSQIIMGDVLNHAALKQAMQ-------GQ   89 (236)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS----SCCTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc----cccCCcEEEEecCCCHHHHHHHhc-------CC
Confidence            567899999999999999999999999 899999999765432    222478899999999999888776       68


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC--C
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP--A  180 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~--~  180 (255)
                      |++|||++...           .              ...++.+++.+++.+.++||++||.+..............  .
T Consensus        90 D~vv~~a~~~~-----------~--------------~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~  144 (236)
T 3qvo_A           90 DIVYANLTGED-----------L--------------DIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVI  144 (236)
T ss_dssp             SEEEEECCSTT-----------H--------------HHHHHHHHHHHHHTTCCEEEEECCCCC----------------
T ss_pred             CEEEEcCCCCc-----------h--------------hHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcc
Confidence            99999875311           1              1235677788877777899999976543321110000000  0


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------Hh--HHhhhhhhhhhhccCCCCCe
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------EA--IASIANAALYNMAKDDDTSY  242 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------~~--~~~~~~~~~~l~~~~~~~~~  242 (255)
                      ..+...+...       ..++.+.||++++|.| +.+.++                ++  ++|++.+++++  +++...+
T Consensus       145 ~~~~~~~~~~-------~~~l~~~gi~~~~vrP-g~i~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~i~~l--l~~~~~~  214 (236)
T 3qvo_A          145 GEPLKPFRRA-------ADAIEASGLEYTILRP-AWLTDEDIIDYELTSRNEPFKGTIVSRKSVAALITDI--IDKPEKH  214 (236)
T ss_dssp             CGGGHHHHHH-------HHHHHTSCSEEEEEEE-CEEECCSCCCCEEECTTSCCSCSEEEHHHHHHHHHHH--HHSTTTT
T ss_pred             cchHHHHHHH-------HHHHHHCCCCEEEEeC-CcccCCCCcceEEeccCCCCCCcEECHHHHHHHHHHH--HcCcccc
Confidence            0111122211       2334568999999999 554332                12  89999999999  7777666


Q ss_pred             eeceeEEecCCc
Q 025252          243 VGKQNLLVNGGF  254 (255)
Q Consensus       243 ~~G~~i~~dgG~  254 (255)
                      + |+.+.++++.
T Consensus       215 ~-g~~~~i~~~~  225 (236)
T 3qvo_A          215 I-GENIGINQPG  225 (236)
T ss_dssp             T-TEEEEEECSS
T ss_pred             c-CeeEEecCCC
Confidence            5 8888888874

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.87  E-value=1.5e-21  Score=168.14  Aligned_cols=209  Identities=15%  Similarity=0.099  Sum_probs=152.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-------CceEEEEeeCCCHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-------QDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~   92 (255)
                      ..+.+++|+++||||+|+||++++++|+++|++|++++|+........+.+..       .++.++.+|++|++++++++
T Consensus        19 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~   98 (351)
T 3ruf_A           19 QQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM   98 (351)
T ss_dssp             HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT
T ss_pred             hhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence            34557899999999999999999999999999999999976543333222211       47899999999999887776


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI  172 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~  172 (255)
                      +       ++|++||+|+....       ..+.+++...+++|+.++.++++++.+.    +.+++|++||.+.......
T Consensus        99 ~-------~~d~Vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~  160 (351)
T 3ruf_A           99 K-------GVDHVLHQAALGSV-------PRSIVDPITTNATNITGFLNILHAAKNA----QVQSFTYAASSSTYGDHPA  160 (351)
T ss_dssp             T-------TCSEEEECCCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCC
T ss_pred             c-------CCCEEEECCccCCc-------chhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEEecHHhcCCCCC
Confidence            5       79999999875431       1245667788999999999999988653    4568999997654432111


Q ss_pred             ----cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------
Q 025252          173 ----EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------  220 (255)
Q Consensus       173 ----~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------  220 (255)
                          ......|...|+.+|.+.+.+++.++.+.   |++++.+.|+. +..+                            
T Consensus       161 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (351)
T 3ruf_A          161 LPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFN-VFGRRQDPNGAYAAVIPKWTAAMLKGDDVYIN  236 (351)
T ss_dssp             SSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECS-EESTTCCCCSTTCCHHHHHHHHHHHTCCCEEE
T ss_pred             CCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCc-eeCcCCCCCcchhhHHHHHHHHHHcCCCcEEe
Confidence                11222455789999999999999998874   78888888732 2111                            


Q ss_pred             -------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 -------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 -------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                             ++  .+|++.+++.+  +.. .....|+++.+.+|
T Consensus       237 g~g~~~~~~i~v~Dva~a~~~~--~~~-~~~~~~~~~ni~~~  275 (351)
T 3ruf_A          237 GDGETSRDFCYIDNVIQMNILS--ALA-KDSAKDNIYNVAVG  275 (351)
T ss_dssp             SSSCCEECCEEHHHHHHHHHHH--HTC-CGGGCSEEEEESCS
T ss_pred             CCCCeEEeeEEHHHHHHHHHHH--Hhh-ccccCCCEEEeCCC
Confidence                   11  78888888877  332 12456888888776

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.86  E-value=3.3e-21  Score=158.13  Aligned_cols=198  Identities=11%  Similarity=-0.037  Sum_probs=141.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||+|+||++++++|+++  |++|++++|+++..+++     ..++.++.+|++|+++++++++       +
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~-------~   69 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-----GGEADVFIGDITDADSINPAFQ-------G   69 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-----TCCTTEEECCTTSHHHHHHHHT-------T
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-----CCCeeEEEecCCCHHHHHHHHc-------C
Confidence            45789999999999999999999999  89999999987654432     2467889999999999888765       6


Q ss_pred             ccEEEEcCCCccccCc------cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252          102 LDILVNSGCNLEYRGF------VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus       102 id~li~~a~~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +|++||+|+.......      ....+...+.+++.+++|+.++.++++++.+.    +.++||++||.+...    +..
T Consensus        70 ~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~iv~~SS~~~~~----~~~  141 (253)
T 1xq6_A           70 IDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----GVKHIVVVGSMGGTN----PDH  141 (253)
T ss_dssp             CSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----TCSEEEEEEETTTTC----TTC
T ss_pred             CCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc----CCCEEEEEcCccCCC----CCC
Confidence            8999999875432110      00112233445567899999999999888653    457899999765422    111


Q ss_pred             CCCC--CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhh
Q 025252          176 CNIP--ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAAL  231 (255)
Q Consensus       176 ~~~~--~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~  231 (255)
                      +..+  ...|+.+|++++.+++       ..|++++++.| +.+.++                    ++  ++|++.++.
T Consensus       142 ~~~~~~~~~y~~sK~~~e~~~~-------~~~i~~~~vrp-g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dva~~~~  213 (253)
T 1xq6_A          142 PLNKLGNGNILVWKRKAEQYLA-------DSGTPYTIIRA-GGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCI  213 (253)
T ss_dssp             GGGGGGGCCHHHHHHHHHHHHH-------TSSSCEEEEEE-CEEECSCSSSSCEEEESTTGGGGSSCCEEEHHHHHHHHH
T ss_pred             ccccccchhHHHHHHHHHHHHH-------hCCCceEEEec-ceeecCCcchhhhhccCCcCCcCCCCcEEcHHHHHHHHH
Confidence            1101  0236668999988764       27899999999 544332                    12  889999999


Q ss_pred             hhhccCCCCCeeeceeEEecCC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      ++  +.+..  .+|+++.+++|
T Consensus       214 ~~--~~~~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          214 QA--LLFEE--AKNKAFDLGSK  231 (253)
T ss_dssp             HH--TTCGG--GTTEEEEEEEC
T ss_pred             HH--HcCcc--ccCCEEEecCC
Confidence            88  54432  47899999885

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.86  E-value=5.4e-21  Score=152.22  Aligned_cols=186  Identities=10%  Similarity=-0.004  Sum_probs=136.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++|+++||||+|+||++++++|+++|++|++++|+++....    ....++.++.+|++|+++++++++       ++|+
T Consensus         2 ~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----EGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc----ccCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            34789999999999999999999999999999998765422    113578899999999998877765       6899


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +||+++....      .  +      ..++|+.++..+++++.+.    +.++++++||.+......  ... .+...|+
T Consensus        71 vi~~a~~~~~------~--~------~~~~n~~~~~~~~~~~~~~----~~~~~v~~Ss~~~~~~~~--~~~-~~~~~y~  129 (206)
T 1hdo_A           71 VIVLLGTRND------L--S------PTTVMSEGARNIVAAMKAH----GVDKVVACTSAFLLWDPT--KVP-PRLQAVT  129 (206)
T ss_dssp             EEECCCCTTC------C--S------CCCHHHHHHHHHHHHHHHH----TCCEEEEECCGGGTSCTT--CSC-GGGHHHH
T ss_pred             EEECccCCCC------C--C------ccchHHHHHHHHHHHHHHh----CCCeEEEEeeeeeccCcc--ccc-ccchhHH
Confidence            9999765431      0  1      1247888888888877643    456899999664332111  000 0236799


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcch-hhh---------------Hh--HHhhhhhhhhhhccCCCCCeeece
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL-AMA---------------EA--IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~-~t~---------------~~--~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                      .+|++++.+.+       ..+++++++.| +.+ +++               ++  ++|++.++.++  +.+.  ..+|+
T Consensus       130 ~~K~~~e~~~~-------~~~i~~~~lrp-~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--~~~~--~~~g~  197 (206)
T 1hdo_A          130 DDHIRMHKVLR-------ESGLKYVAVMP-PHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRC--LTTD--EYDGH  197 (206)
T ss_dssp             HHHHHHHHHHH-------HTCSEEEEECC-SEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHT--TSCS--TTTTC
T ss_pred             HHHHHHHHHHH-------hCCCCEEEEeC-CcccCCCCCcceEecccCCCCCCccCHHHHHHHHHHH--hcCc--ccccc
Confidence            99999998873       26899999999 444 221               12  89999999988  5543  36899


Q ss_pred             eEEecCCc
Q 025252          247 NLLVNGGF  254 (255)
Q Consensus       247 ~i~~dgG~  254 (255)
                      ++.++||+
T Consensus       198 ~~~i~~g~  205 (206)
T 1hdo_A          198 STYPSHQY  205 (206)
T ss_dssp             EEEEECCC
T ss_pred             ceeeeccc
Confidence            99999996

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.86  E-value=6.7e-21  Score=163.35  Aligned_cols=193  Identities=15%  Similarity=0.080  Sum_probs=137.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||+|+||++++++|+++|++|++++|+....+++.    ..++.++.+|++|+++++++++       ++|++|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   82 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA----YLEPECRVAEMLDHAGLERALR-------GLDGVI   82 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG----GGCCEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc----cCCeEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            47999999999999999999999999999999876543321    2368889999999998877665       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCCC--
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNIP--  179 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~~--  179 (255)
                      |+|+...         .+.+++++.+++|+.++.++++++.+.    +.+++|++||.+.......     ......|  
T Consensus        83 h~a~~~~---------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~  149 (342)
T 2x4g_A           83 FSAGYYP---------SRPRRWQEEVASALGQTNPFYAACLQA----RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLP  149 (342)
T ss_dssp             EC---------------------CHHHHHHHHHHHHHHHHHHH----TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCC
T ss_pred             ECCccCc---------CCCCCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccc
Confidence            9976432         234567889999999999999999874    3478999997654432111     1112223  


Q ss_pred             --CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhh
Q 025252          180 --ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIAN  228 (255)
Q Consensus       180 --~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~  228 (255)
                        ...|+.+|++.+.+++.++.   + |++++++.| +.+.++                           ++  ++|++.
T Consensus       150 ~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  224 (342)
T 2x4g_A          150 SGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIP-GMVLGELDIGPTTGRVITAIGNGEMTHYVAGQRNVIDAAEAGR  224 (342)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEE-CEEECSCCSSCSTTHHHHHHHTTCCCEEECCEEEEEEHHHHHH
T ss_pred             cccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeC-CceECCCCccccHHHHHHHHHcCCCccccCCCcceeeHHHHHH
Confidence              56799999999999999886   3 889999988 432110                           02  788888


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      ++..+  +.+...   |+++.+++|
T Consensus       225 ~~~~~--~~~~~~---g~~~~v~~~  244 (342)
T 2x4g_A          225 GLLMA--LERGRI---GERYLLTGH  244 (342)
T ss_dssp             HHHHH--HHHSCT---TCEEEECCE
T ss_pred             HHHHH--HhCCCC---CceEEEcCC
Confidence            88877  433322   888888876

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.86  E-value=7.3e-22  Score=167.37  Aligned_cols=197  Identities=16%  Similarity=0.129  Sum_probs=145.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+..    ..++.++.+|++|.+ +.++++       . |++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~vi   67 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV----NPSAELHVRDLKDYS-WGAGIK-------G-DVVF   67 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS----CTTSEEECCCTTSTT-TTTTCC-------C-SEEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc----CCCceEEECccccHH-HHhhcC-------C-CEEE
Confidence            46999999999999999999999999999999765433211    357889999999987 554433       3 9999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+...       ...+.++++..+++|+.++.++++++.+.    +.+++|++||.+......    .......|.+.
T Consensus        68 h~A~~~~-------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~  136 (312)
T 3ko8_A           68 HFAANPE-------VRLSTTEPIVHFNENVVATFNVLEWARQT----GVRTVVFASSSTVYGDADVIPTPEEEPYKPISV  136 (312)
T ss_dssp             ECCSSCS-------SSGGGSCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             ECCCCCC-------chhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCCh
Confidence            9987432       23456678889999999999999998643    456899999765443211    11123345678


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |+.||++.+.+++.++.++   |++++++.| +.+.++                               ++  ++|++.+
T Consensus       137 Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  212 (312)
T 3ko8_A          137 YGAAKAAGEVMCATYARLF---GVRCLAVRY-ANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEA  212 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---CCEEEEEEE-CEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHh---CCCEEEEee-ccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHH
Confidence            9999999999999999985   899999998 433322                               11  7888998


Q ss_pred             hhhhhccCC-CCCeeeceeEEecCC
Q 025252          230 ALYNMAKDD-DTSYVGKQNLLVNGG  253 (255)
Q Consensus       230 ~~~l~~~~~-~~~~~~G~~i~~dgG  253 (255)
                      ++.+  +.. ......|+++.+.+|
T Consensus       213 ~~~~--~~~~~~~~~~~~~~ni~~~  235 (312)
T 3ko8_A          213 TLAA--WKKFEEMDAPFLALNVGNV  235 (312)
T ss_dssp             HHHH--HHHHHHSCCSEEEEEESCS
T ss_pred             HHHH--HHhccccCCCCcEEEEcCC
Confidence            8887  432 123456888888776

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.86  E-value=5.8e-21  Score=163.60  Aligned_cols=199  Identities=15%  Similarity=0.142  Sum_probs=143.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---C---CEEEEEecCcc--hHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKN---G---AKVVIADVQDN--LGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~---g---~~v~~~~r~~~--~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++||||+|+||++++++|+++   |   ++|++++|+..  ..+.+ +.+. ..++.++.+|++|++++++++      
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVDADPRLRFVHGDIRDAGLLAREL------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcccCCCeEEEEcCCCCHHHHHHHh------
Confidence            5999999999999999999997   8   99999998642  11111 1121 247889999999999887765      


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~  174 (255)
                       +++|++||+|+....       +.+.+++++.+++|+.++.++++++.+.    +.++||++||.+.....    ....
T Consensus        75 -~~~d~Vih~A~~~~~-------~~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~  142 (337)
T 1r6d_A           75 -RGVDAIVHFAAESHV-------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTES  142 (337)
T ss_dssp             -TTCCEEEECCSCCCH-------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             -cCCCEEEECCCccCc-------hhhhhCHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEecchHHhCCCCCCCCCCC
Confidence             389999999865421       1234566788999999999999999875    34689999976433211    0111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh-
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA-  222 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~-  222 (255)
                      .+..|...|+.||++.+.+++.++.++   |++++++.| +.+.++                               ++ 
T Consensus       143 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          143 SPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRC-CNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEE-CEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEe-eeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence            123455789999999999999998874   788888888 332111                               11 


Q ss_pred             -HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 -IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 -~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                       ++|++.++..+  +.+.   .+|+++.+++|.
T Consensus       219 ~v~Dva~a~~~~--~~~~---~~g~~~~v~~~~  246 (337)
T 1r6d_A          219 HTDDHCRGIALV--LAGG---RAGEIYHIGGGL  246 (337)
T ss_dssp             EHHHHHHHHHHH--HHHC---CTTCEEEECCCC
T ss_pred             eHHHHHHHHHHH--HhCC---CCCCEEEeCCCC
Confidence             78888888877  3322   368889998873

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.86  E-value=2.9e-21  Score=168.30  Aligned_cols=179  Identities=13%  Similarity=0.113  Sum_probs=126.6

Q ss_pred             cCcccCccceeeecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHH
Q 025252           12 NNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVI   89 (255)
Q Consensus        12 ~~~~~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~   89 (255)
                      ..++|..+....+++|+++||||+|+||++++++|+++| ++|++++|+.....+   .+. ..++.++.+|++|+++++
T Consensus        18 ~~~m~~~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~~~~~v~~~~~Dl~d~~~l~   94 (377)
T 2q1s_A           18 GSHMPVIMNASKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVPDHPAVRFSETSITDDALLA   94 (377)
T ss_dssp             --------CCGGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSCCCTTEEEECSCTTCHHHHH
T ss_pred             cccCCCCCChHHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hccCCCceEEEECCCCCHHHHH
Confidence            344554444456788999999999999999999999999 999999997653211   111 357889999999998876


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcc
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTA  168 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~  168 (255)
                      ++++       ++|++||+|+....       ..+.+++++.+++|+.++.++++++.    +. +.+++|++||.+...
T Consensus        95 ~~~~-------~~d~Vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~~~~~V~~SS~~vyg  156 (377)
T 2q1s_A           95 SLQD-------EYDYVFHLATYHGN-------QSSIHDPLADHENNTLTTLKLYERLK----HFKRLKKVVYSAAGCSIA  156 (377)
T ss_dssp             HCCS-------CCSEEEECCCCSCH-------HHHHHCHHHHHHHHTHHHHHHHHHHT----TCSSCCEEEEEEEC----
T ss_pred             HHhh-------CCCEEEECCCccCc-------hhhhhCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCCHHHcC
Confidence            6554       79999999865431       12345678899999999999998884    33 456899999765432


Q ss_pred             cccc------cCc---CC-CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          169 CTEI------EGL---CN-IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       169 ~~~~------~~~---~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      ....      ...   +. .|...|+.+|++.+.+++.++.+.   |++++++.|+
T Consensus       157 ~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~  209 (377)
T 2q1s_A          157 EKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQ  209 (377)
T ss_dssp             ----------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEEC
T ss_pred             CCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeec
Confidence            2110      111   22 455789999999999999998874   8899999884

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.85  E-value=4.1e-20  Score=162.03  Aligned_cols=179  Identities=15%  Similarity=0.087  Sum_probs=129.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH-----------------HHHH--HhCCCceEEEEeeCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ-----------------ALAD--KLGHQDVCYIHCDVS   83 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~-----------------~~~~--~~~~~~~~~~~~D~~   83 (255)
                      ..++++++||||+|+||++++++|+++|++|++++|......                 .+..  .....++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            356788999999999999999999999999999988643211                 1111  111247889999999


Q ss_pred             CHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEecc
Q 025252           84 NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTG  163 (255)
Q Consensus        84 ~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~  163 (255)
                      |+++++++++..     ++|++||+|+.....    ....+.++++..+++|+.++.++++++.+.-   ...+||++||
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~----~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~---~~~~~V~~SS  155 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAP----YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG---EECHLVKLGT  155 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHH----HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC---TTCEEEEECC
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCcc----chhhCccchhhhHHHHHHHHHHHHHHHHHhC---CCcEEEEeCc
Confidence            999998888765     699999998754321    1122566677899999999999999997642   1248999997


Q ss_pred             CCCccccccc--C---------------cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          164 TGTTACTEIE--G---------------LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       164 ~~~~~~~~~~--~---------------~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      .+.......+  .               ....|.+.|+.||++.+.+++.++.++   |++++++.| +.+
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp-~~v  222 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQ-GVV  222 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE-CEE
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEec-cee
Confidence            6543221100  0               123455789999999999999998875   899999999 543

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.85  E-value=6.1e-21  Score=161.93  Aligned_cols=194  Identities=13%  Similarity=0.205  Sum_probs=140.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|..|++..++......     ....+.++.+|+++ +++.++++       ++|++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~~-----~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~vi   68 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEEF-----VNEAARLVKADLAA-DDIKDYLK-------GAEEVW   68 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGGG-----SCTTEEEECCCTTT-SCCHHHHT-------TCSEEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChhh-----cCCCcEEEECcCCh-HHHHHHhc-------CCCEEE
Confidence            469999999999999999999999555554444433221     12468899999999 77776655       799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+...       ...+.++++..+++|+.++.++++++.+    .+.+++|++||.+......    ....+..|.+.
T Consensus        69 h~a~~~~-------~~~~~~~~~~~~~~nv~~~~~l~~~~~~----~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~  137 (313)
T 3ehe_A           69 HIAANPD-------VRIGAENPDEIYRNNVLATYRLLEAMRK----AGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISL  137 (313)
T ss_dssp             ECCCCCC-------CC-CCCCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred             ECCCCCC-------hhhhhhCHHHHHHHHHHHHHHHHHHHHH----cCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCH
Confidence            9976432       2345677889999999999999998754    3457899999765443211    11123345578


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |+.+|++.+.+++.++.+   .|++++++.| +.+..+                               ++  .+|++.+
T Consensus       138 Y~~sK~~~e~~~~~~~~~---~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a  213 (313)
T 3ehe_A          138 YGASKLACEALIESYCHT---FDMQAWIYRF-ANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDA  213 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TTCEEEEEEC-SCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHh---cCCCEEEEee-ccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHH
Confidence            999999999999999988   4899999998 433221                               11  7889999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      +..+  +.+   ...|+++.+.+|
T Consensus       214 ~~~~--~~~---~~~~~~~ni~~~  232 (313)
T 3ehe_A          214 MLFG--LRG---DERVNIFNIGSE  232 (313)
T ss_dssp             HHHH--TTC---CSSEEEEECCCS
T ss_pred             HHHH--hcc---CCCCceEEECCC
Confidence            9888  442   245788888776

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.85  E-value=4.1e-20  Score=161.75  Aligned_cols=173  Identities=17%  Similarity=0.197  Sum_probs=129.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHH-HcCCEEEEEecCcch---------HHHH---HHHhCC----Cc---eEEEEeeCCCH
Q 025252           26 GRVAIITGGASGIGASAAQLFH-KNGAKVVIADVQDNL---------GQAL---ADKLGH----QD---VCYIHCDVSNE   85 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~-~~g~~v~~~~r~~~~---------~~~~---~~~~~~----~~---~~~~~~D~~~~   85 (255)
                      +++++||||+|+||++++++|+ ++|++|++++|+...         ...+   .+++..    .+   +.++.+|++|+
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            4579999999999999999999 999999999987543         2333   222221    24   88999999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCC
Q 025252           86 REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTG  165 (255)
Q Consensus        86 ~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~  165 (255)
                      +++++++++    ++++|++||+|+.....       .+.++++..+++|+.++.++++++.+    .+.++||++||.+
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~-------~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG-------ESVRDPLKYYDNNVVGILRLLQAMLL----HKCDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC-------cchhhHHHHHHHHhHHHHHHHHHHHH----hCCCEEEEECCHH
Confidence            998887764    45699999998754311       14467788999999999999998754    3457899999765


Q ss_pred             Cccccc-----------ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          166 TTACTE-----------IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       166 ~~~~~~-----------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      ......           .......|...|+.||++.+.+++.++.++   |++++++.| +.+
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp-~~v  205 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRY-FNA  205 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE-CEE
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEec-cce
Confidence            432211           011112345789999999999999999885   899999999 544

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.85  E-value=8.6e-21  Score=167.92  Aligned_cols=197  Identities=16%  Similarity=0.080  Sum_probs=139.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHh-----------CCCceEEEEeeCCCHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKL-----------GHQDVCYIHCDVSNEREVI   89 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~-----------~~~~~~~~~~D~~~~~~~~   89 (255)
                      ..+|+++||||+|+||++++++|++.|++|++++|++.   ...++.+.+           ...++.++.+|++|++++.
T Consensus        67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~  146 (427)
T 4f6c_A           67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV  146 (427)
T ss_dssp             CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred             CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence            45789999999999999999999999999999999877   222222211           1257999999999988776


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC  169 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~  169 (255)
                              ..+++|++||+|+...          ..+.++..+++|+.++.++++++.+     +..++|++||.+. +.
T Consensus       147 --------~~~~~d~Vih~A~~~~----------~~~~~~~~~~~Nv~g~~~l~~aa~~-----~~~~~v~~SS~~~-G~  202 (427)
T 4f6c_A          147 --------LPENMDTIIHAGARTD----------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GT  202 (427)
T ss_dssp             --------CSSCCSEEEECCCCC-----------------CHHHHHHHHHHHHHHHHHH-----TTCEEEEEEEGGG-GS
T ss_pred             --------CcCCCCEEEECCcccC----------CCCCHHHHHHHHHHHHHHHHHHHHh-----cCCcEEEECchHh-CC
Confidence                    3468999999987543          2356788999999999999999976     3468999997654 11


Q ss_pred             ccc------------cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------
Q 025252          170 TEI------------EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------  220 (255)
Q Consensus       170 ~~~------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------  220 (255)
                      ...            ...+..|...|+.||++.+.+++.++.    .|++++++.||. +.++                 
T Consensus       203 ~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~-v~G~~~~~~~~~~~~~~~~~~  277 (427)
T 4f6c_A          203 YFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGN-LTSPYNGRWHMRNIKTNRFSM  277 (427)
T ss_dssp             EECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECC-EESCSSSCCCCTTGGGCHHHH
T ss_pred             CccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCe-eecCCCCCccccCcchHHHHH
Confidence            100            001122557899999999999988754    689999999833 2111                 


Q ss_pred             --------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          221 --------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       221 --------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                                          .+  .++++.++..+  .....   .|+++.+++|-
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~--~~~~~---~g~~~~l~~~~  328 (427)
T 4f6c_A          278 VMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVAL--AQVNT---PQIIYHVLSPN  328 (427)
T ss_dssp             HHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHH--TTSCC---CCSEEEESCSC
T ss_pred             HHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHH--HcCCC---CCCEEEecCCC
Confidence                                01  68899999888  54433   78899998873

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.85  E-value=3.2e-20  Score=159.06  Aligned_cols=186  Identities=13%  Similarity=0.075  Sum_probs=133.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHH-HcCCEEEEEecCcchH---------------HHHHHHhCCCceEEEEeeCCCHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFH-KNGAKVVIADVQDNLG---------------QALADKLGHQDVCYIHCDVSNERE   87 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~-~~g~~v~~~~r~~~~~---------------~~~~~~~~~~~~~~~~~D~~~~~~   87 (255)
                      ..+|++||||+|+|||+|.+..|+ +.|++++++.+..+..               .+..++.+ .....+.||++++++
T Consensus        48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G-~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREG-LYSVTIDGDAFSDEI  126 (401)
T ss_dssp             CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHT-CCEEEEESCTTSHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcC-CCceeEeCCCCCHHH
Confidence            468999999999999999999998 6899999988764321               12222222 578899999999999


Q ss_pred             HHHHHHHHHHHcCCccEEEEcCCCccccC----------ccC---------------------CCCCChHHHHHH---Hh
Q 025252           88 VINLVDTTVAKFGKLDILVNSGCNLEYRG----------FVS---------------------ILDTPKSDLERL---LA  133 (255)
Q Consensus        88 ~~~~~~~~~~~~g~id~li~~a~~~~~~~----------~~~---------------------~~~~~~~~~~~~---~~  133 (255)
                      ++++++++++.+|+||+||||++......          .++                     +...+.++++.+   |.
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            99999999999999999999965442110          011                     123355555554   44


Q ss_pred             hhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          134 VNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       134 ~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ....+.+...+...+.|.  ++++++..|+.+.....+  ....   ..++++|++|++.++.|+.++++  +++|+++|
T Consensus       207 ~s~~s~w~~al~~a~lla--~G~siva~SYiGse~t~P--~Y~~---G~mG~AKaaLEa~~r~La~eL~~--~~a~v~v~  277 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLE--EGCITLAYSYIGPEATQA--LYRK---GTIGKAKEHLEATAHRLNKENPS--IRAFVSVN  277 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEE--EEEEEEEEECCCCGGGHH--HHTT---SHHHHHHHHHHHHHHHHHHHCTT--EEEEEEEC
T ss_pred             hhHHHHHHHHHHhhhccc--CCceEEEEeccCcceeec--CCCc---cHHHHHHHHHHHHHHHHHHhcCC--CcEEEEEc
Confidence            455566666666667773  468899988554322111  1111   24799999999999999999974  78999998


Q ss_pred             Ccchhhh
Q 025252          214 TYGLAMA  220 (255)
Q Consensus       214 ~~~~~t~  220 (255)
                       +.+.|.
T Consensus       278 -~a~vT~  283 (401)
T 4ggo_A          278 -KGLVTR  283 (401)
T ss_dssp             -CCCCCT
T ss_pred             -Cccccc
Confidence             777775

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.84  E-value=4e-20  Score=158.38  Aligned_cols=203  Identities=17%  Similarity=0.162  Sum_probs=138.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ..+++|+++||||+|+||++++++|+++|++|++++|+.....+....+  .++.++.+|++|+++++++++..     +
T Consensus        17 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~--~~~~~~~~Dl~d~~~~~~~~~~~-----~   89 (333)
T 2q1w_A           17 RGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDH--PNLTFVEGSIADHALVNQLIGDL-----Q   89 (333)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCC--TTEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             ecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhc--CCceEEEEeCCCHHHHHHHHhcc-----C
Confidence            3467899999999999999999999999999999999754321111111  46888999999999998888752     7


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc----cccccCcCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA----CTEIEGLCN  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~----~~~~~~~~~  177 (255)
                      +|++||+|+....       . +.++++  +++|+.++.++++++.+    .+.++||++||.+...    ....+....
T Consensus        90 ~D~vih~A~~~~~-------~-~~~~~~--~~~N~~~~~~l~~a~~~----~~~~~iV~~SS~~~~g~~~~~~~~~~~E~  155 (333)
T 2q1w_A           90 PDAVVHTAASYKD-------P-DDWYND--TLTNCVGGSNVVQAAKK----NNVGRFVYFQTALCYGVKPIQQPVRLDHP  155 (333)
T ss_dssp             CSEEEECCCCCSC-------T-TCHHHH--HHHHTHHHHHHHHHHHH----TTCSEEEEEEEGGGGCSCCCSSSBCTTSC
T ss_pred             CcEEEECceecCC-------C-ccCChH--HHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCcccCCCCcCCC
Confidence            9999999875431       1 334554  99999999999999976    3457899999765432    110000000


Q ss_pred             -CCC-cccccchHHHHHHHHH-HHHHhcccCcEE-eEeccCc---ch----hh----------h---Hh--HHhhhhhhh
Q 025252          178 -IPA-NYYGVSKFGILGLVKS-LAAELGRYGIRV-DCVSHTY---GL----AM----------A---EA--IASIANAAL  231 (255)
Q Consensus       178 -~~~-~~Y~asKaa~~~~~~~-la~e~~~~gi~v-~~v~p~~---~~----~t----------~---~~--~~~~~~~~~  231 (255)
                       .|. ..|+.+|++.+.+++. ++   .-..+|. +.+.|+.   .+    ..          .   ++  ++|++.++.
T Consensus       156 ~~p~~~~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~  232 (333)
T 2q1w_A          156 RNPANSSYAISKSANEDYLEYSGL---DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATV  232 (333)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHTC---CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEEEECEECEEEHHHHHHHHH
T ss_pred             CCCCCCchHHHHHHHHHHHHhhhC---CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeCCCceEeeEEHHHHHHHHH
Confidence             344 6799999999999887 65   1123444 3334421   11    00          0   12  899999998


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ++  +.+..    |+++.+++|.
T Consensus       233 ~~--~~~~~----g~~~~v~~~~  249 (333)
T 2q1w_A          233 RA--VDGVG----HGAYHFSSGT  249 (333)
T ss_dssp             HH--HTTCC----CEEEECSCSC
T ss_pred             HH--HhcCC----CCEEEeCCCC
Confidence            88  54433    8899998874

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.84  E-value=3.8e-20  Score=160.50  Aligned_cols=163  Identities=13%  Similarity=0.110  Sum_probs=118.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-----HHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-----QALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-----~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+....     +++.+..  ...++.++.+|++|+++++++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            36899999999999999999999999999999976531     1111111  1246888999999999999988865   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~  174 (255)
                        ++|++||+|+....       ..+.++++..+++|+.++.++++++.+...+ +.+++|++||.+......    ...
T Consensus        78 --~~d~vih~A~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~iv~~SS~~v~g~~~~~~~~E~  147 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV-------AVSFESPEYTADVDAMGTLRLLEAIRFLGLE-KKTRFYQASTSELYGLVQEIPQKET  147 (372)
T ss_dssp             --CCSEEEECCCCCTT-------TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-TTCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             --CCCEEEECCcccCc-------cccccCHHHHHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCChhhhCCCCCCCCCcc
Confidence              79999999875431       2345667889999999999999999876533 347899999764432211    111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAEL  201 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~  201 (255)
                      ....|...|+.||++.+.+++.++.++
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~  174 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRESY  174 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh
Confidence            222345789999999999999999874

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.84  E-value=7.6e-21  Score=157.92  Aligned_cols=176  Identities=16%  Similarity=0.211  Sum_probs=134.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.....       ..++.++.+|++|+++++++++       ++|++|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   68 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------EAHEEIVACDLADAQAVHDLVK-------DCDGII   68 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------CTTEEECCCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------CCCccEEEccCCCHHHHHHHHc-------CCCEEE
Confidence            67999999999999999999999999999999875321       1357888999999998877765       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----ccCcCCCCCc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----IEGLCNIPAN  181 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~~~~~~~~~~  181 (255)
                      |+|+..           +.+.++..+++|+.++.++++++.+    .+.++||++||........     .......|..
T Consensus        69 ~~a~~~-----------~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~  133 (267)
T 3ay3_A           69 HLGGVS-----------VERPWNDILQANIIGAYNLYEAARN----LGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDS  133 (267)
T ss_dssp             ECCSCC-----------SCCCHHHHHHHTHHHHHHHHHHHHH----TTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCS
T ss_pred             ECCcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCC
Confidence            997643           1235678899999999999999875    3457899999765332211     1111223457


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------Hh--HHhhhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------EA--IASIANAALYNM  234 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------~~--~~~~~~~~~~l~  234 (255)
                      .|+.+|++.+.+++.++.+   .|++++++.|+...+++       ++  +++++..+..++
T Consensus       134 ~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~~~~~~~~~~~~~dva~~~~~~~  192 (267)
T 3ay3_A          134 LYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPKDARMMATWLSVDDFMRLMKRAF  192 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCCSHHHHHHBCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCCCCCeeeccccHHHHHHHHHHHH
Confidence            8999999999999888654   68999999994433432       12  899999998873

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.84  E-value=4.7e-20  Score=160.73  Aligned_cols=169  Identities=15%  Similarity=0.150  Sum_probs=127.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +..++|+++||||+|+||++++++|+++|++|++++|+.......    ...++.++.+|++|+++++++++       +
T Consensus        25 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           25 WPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE----DMFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             CTTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG----GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             ccccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh----ccCCceEEECCCCCHHHHHHHhC-------C
Confidence            445678999999999999999999999999999999986543211    11368889999999998887764       7


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---------
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---------  172 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---------  172 (255)
                      +|++||+|+.....      ..+.++++..+++|+.++.++++++.+    .+.+++|++||.+.......         
T Consensus        94 ~d~Vih~A~~~~~~------~~~~~~~~~~~~~Nv~g~~~ll~a~~~----~~~~~~V~~SS~~v~~~~~~~~~~~~~~~  163 (379)
T 2c5a_A           94 VDHVFNLAADMGGM------GFIQSNHSVIMYNNTMISFNMIEAARI----NGIKRFFYASSACIYPEFKQLETTNVSLK  163 (379)
T ss_dssp             CSEEEECCCCCCCH------HHHTTCHHHHHHHHHHHHHHHHHHHHH----TTCSEEEEEEEGGGSCGGGSSSSSSCEEC
T ss_pred             CCEEEECceecCcc------cccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEeehheeCCCCCCCccCCCcC
Confidence            99999997654211      001346788899999999999999864    34568999997654332110         


Q ss_pred             cCc--CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          173 EGL--CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       173 ~~~--~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      ...  ...|...|+.+|++.+.+++.++.+   .|++++++.|+
T Consensus       164 E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilrp~  204 (379)
T 2c5a_A          164 ESDAWPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRFH  204 (379)
T ss_dssp             GGGGSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEEC
T ss_pred             cccCCCCCCCChhHHHHHHHHHHHHHHHHH---HCCCEEEEEeC
Confidence            000  2345578999999999999999887   48999999983

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.84  E-value=8.6e-21  Score=160.86  Aligned_cols=164  Identities=15%  Similarity=0.185  Sum_probs=123.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+++|++|++++|......   +.+. .++.++.+|++|++++++++++.     ++|++||
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~---~~~~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi~   72 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR---ENVP-KGVPFFRVDLRDKEGVERAFREF-----RPTHVSH   72 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG---GGSC-TTCCEECCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch---hhcc-cCeEEEECCCCCHHHHHHHHHhc-----CCCEEEE
Confidence            6999999999999999999999999999988543211   1111 35778899999999998888753     7899999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccC-CCccc-----ccccCcCCCCCc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT-GTTAC-----TEIEGLCNIPAN  181 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~-~~~~~-----~~~~~~~~~~~~  181 (255)
                      +|+....       ..+.++++..+++|+.++.++++++.+    .+.+++|++||. .....     .........|..
T Consensus        73 ~a~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~a~~~----~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~  141 (311)
T 2p5y_A           73 QAAQASV-------KVSVEDPVLDFEVNLLGGLNLLEACRQ----YGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS  141 (311)
T ss_dssp             CCSCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHH----TTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred             CccccCc-------hhhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence            9764321       124567788999999999999998864    345789999965 21111     111111223457


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      .|++||++.+.+++.++.+   .|++++++.|+
T Consensus       142 ~Y~~sK~~~e~~~~~~~~~---~~~~~~~lrp~  171 (311)
T 2p5y_A          142 PYAASKAAFEHYLSVYGQS---YGLKWVSLRYG  171 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---HCCCEEEEEEC
T ss_pred             hHHHHHHHHHHHHHHHHHH---cCCCEEEEeec
Confidence            8999999999999999887   47899999883

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.84  E-value=1.6e-20  Score=152.05  Aligned_cols=189  Identities=11%  Similarity=0.016  Sum_probs=140.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|++|++++|+++....+     ..++.++.+|++|+++++++++       ++|++|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~-------~~d~vi   72 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-----NEHLKVKKADVSSLDEVCEVCK-------GADAVI   72 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-----CTTEEEECCCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-----cCceEEEEecCCCHHHHHHHhc-------CCCEEE
Confidence            6799999999999999999999999999999997654321     1578899999999999888766       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---ccCcCCCCCccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---IEGLCNIPANYY  183 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~~~~~~~~~~~Y  183 (255)
                      |+|+...             .....+++|+.++.++++++.+    .+.+++|++||.+......   .......|...|
T Consensus        73 ~~a~~~~-------------~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y  135 (227)
T 3dhn_A           73 SAFNPGW-------------NNPDIYDETIKVYLTIIDGVKK----AGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENIL  135 (227)
T ss_dssp             ECCCC-------------------CCSHHHHHHHHHHHHHHH----TTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGH
T ss_pred             EeCcCCC-------------CChhHHHHHHHHHHHHHHHHHH----hCCCEEEEeCChhhccCCCCCccccCCcchHHHH
Confidence            9875331             0112788999999888888764    3456899999765433221   111222355789


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      +.+|++.+.+.+.+++   ..|++++++.| +.+.++                     ++  ++|++.++..+  +.+. 
T Consensus       136 ~~sK~~~e~~~~~~~~---~~~~~~~ilrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~--l~~~-  208 (227)
T 3dhn_A          136 PGVKALGEFYLNFLMK---EKEIDWVFFSP-AADMRPGVRTGRYRLGKDDMIVDIVGNSHISVEDYAAAMIDE--LEHP-  208 (227)
T ss_dssp             HHHHHHHHHHHHTGGG---CCSSEEEEEEC-CSEEESCCCCCCCEEESSBCCCCTTSCCEEEHHHHHHHHHHH--HHSC-
T ss_pred             HHHHHHHHHHHHHHhh---ccCccEEEEeC-CcccCCCccccceeecCCCcccCCCCCcEEeHHHHHHHHHHH--HhCc-
Confidence            9999999988877765   36899999999 544322                     12  89999999988  4333 


Q ss_pred             CeeeceeEEecC
Q 025252          241 SYVGKQNLLVNG  252 (255)
Q Consensus       241 ~~~~G~~i~~dg  252 (255)
                       ...|+.+.+.+
T Consensus       209 -~~~g~~~~~~~  219 (227)
T 3dhn_A          209 -KHHQERFTIGY  219 (227)
T ss_dssp             -CCCSEEEEEEC
T ss_pred             -cccCcEEEEEe
Confidence             35688887765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.84  E-value=7e-20  Score=159.56  Aligned_cols=164  Identities=13%  Similarity=0.050  Sum_probs=122.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-----HHHHHHHhC--CC-ceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQALADKLG--HQ-DVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~--~~-~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.+.     .+.+.....  .. ++.++.+|++|.++++++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998653     221111110  12 6888999999999999888865   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCccccc---ccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTE---IEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~---~~~  174 (255)
                        ++|++||+|+....       ..+.++++..+++|+.++.++++++.+...+ .+.+++|++||.+......   ...
T Consensus       106 --~~d~Vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~  176 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHV-------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  176 (381)
T ss_dssp             --CCSEEEECCSCCCH-------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             --CCCEEEECCcccCc-------cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCC
Confidence              79999999875431       1235678899999999999999999987643 2346999999765432211   111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELG  202 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~  202 (255)
                      ....|...|+.+|++.+.+++.++.++.
T Consensus       177 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~~  204 (381)
T 1n7h_A          177 TPFHPRSPYAASKCAAHWYTVNYREAYG  204 (381)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHhC
Confidence            1234457899999999999999998753

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.84  E-value=4.6e-21  Score=198.16  Aligned_cols=172  Identities=13%  Similarity=0.126  Sum_probs=125.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchH---HHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLG---QALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~---~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+|+++||||++|||+++++.|+++|++ |++++|+....   .+..+++  ...++.++.||++|.++++++++++.+ 
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~- 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQ- 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHH-
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHh-
Confidence            6899999999999999999999999997 88889886543   2333332  234688899999999999999999864 


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|+||++|||||....   ..+.+.+.++|++++++|+.+++++.+.+.+.+.+  .++||++||    ..+..+.++. 
T Consensus      1962 ~g~id~lVnnAgv~~~---~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~--~g~iV~iSS----~ag~~g~~g~- 2031 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRD---AVLENQTPEFFQDVSKPKYSGTANLDRVTREACPE--LDYFVIFSS----VSCGRGNAGQ- 2031 (2512)
T ss_dssp             HSCEEEEEECCCC-------------------CTTTTHHHHHHHHHHHHHHCTT--CCEEEEECC----HHHHTTCTTC-
T ss_pred             cCCCcEEEECCCcCCC---CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc--CCEEEEecc----hhhcCCCCCc-
Confidence            7999999999886542   46778899999999999999999999999998854  389999994    4334444333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                        ..|++||+++++|++....+    |+...++..
T Consensus      2032 --~~Y~aaKaal~~l~~~rr~~----Gl~~~a~~~ 2060 (2512)
T 2vz8_A         2032 --ANYGFANSAMERICEKRRHD----GLPGLAVQW 2060 (2512)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHT----TSCCCEEEE
T ss_pred             --HHHHHHHHHHHHHHHHHHHC----CCcEEEEEc
Confidence              67999999999999966653    555555544

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.83  E-value=2.8e-20  Score=161.53  Aligned_cols=202  Identities=13%  Similarity=0.113  Sum_probs=147.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCC-CHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS-NEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g  100 (255)
                      .|++|+++||||+|+||++++++|+++ |++|++++|+.+...++..   ..++.++.+|++ |.+.++++++       
T Consensus        21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~---~~~v~~~~~Dl~~d~~~~~~~~~-------   90 (372)
T 3slg_A           21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK---HERMHFFEGDITINKEWVEYHVK-------   90 (372)
T ss_dssp             --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG---STTEEEEECCTTTCHHHHHHHHH-------
T ss_pred             ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc---CCCeEEEeCccCCCHHHHHHHhc-------
Confidence            367889999999999999999999998 9999999998765443322   257999999999 9999888776       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cC--
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EG--  174 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~--  174 (255)
                      ++|++||+|+.....       ...++....+++|+.++.++++++...    + .++|++||.+.......    ..  
T Consensus        91 ~~d~Vih~A~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~a~~~~----~-~~~v~~SS~~vyg~~~~~~~~e~~~  158 (372)
T 3slg_A           91 KCDVILPLVAIATPA-------TYVKQPLRVFELDFEANLPIVRSAVKY----G-KHLVFPSTSEVYGMCADEQFDPDAS  158 (372)
T ss_dssp             HCSEEEECBCCCCHH-------HHHHCHHHHHHHHTTTTHHHHHHHHHH----T-CEEEEECCGGGGBSCCCSSBCTTTC
T ss_pred             cCCEEEEcCccccHH-------HHhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEeCcHHHhCCCCCCCCCcccc
Confidence            589999997654311       134566788999999999999988653    3 68999997654332111    00  


Q ss_pred             -----cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh----------------h-------------
Q 025252          175 -----LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM----------------A-------------  220 (255)
Q Consensus       175 -----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t----------------~-------------  220 (255)
                           +...|.+.|+.+|.+.+.+++.++.+    |+++.++.|+.....                .             
T Consensus       159 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (372)
T 3slg_A          159 ALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENIS  234 (372)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEE
T ss_pred             ccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcE
Confidence                 01134457999999999999888765    889988887332100                0             


Q ss_pred             ---------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecC
Q 025252          221 ---------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       221 ---------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                               ++  .+|++.++..+  +........|+++.+.+
T Consensus       235 ~~~~g~~~~~~i~v~Dva~a~~~~--~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          235 LVDGGSQKRAFTYVDDGISALMKI--IENSNGVATGKIYNIGN  275 (372)
T ss_dssp             EGGGGCCEEECEEHHHHHHHHHHH--HHCGGGTTTTEEEEECC
T ss_pred             EeCCCceEEEEEEHHHHHHHHHHH--HhcccCcCCCceEEeCC
Confidence                     11  78999999888  44443335688888887

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.83  E-value=6.8e-20  Score=159.31  Aligned_cols=171  Identities=13%  Similarity=0.068  Sum_probs=125.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-----HHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-----~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |+++||||+|+||++++++|+++|++|++++|+...     .+.+.+..   ...++.++.+|++|+++++++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999997543     11111110   1246888999999999999888865   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~  174 (255)
                        ++|++||+|+....       ..+.++++..+++|+.++.++++++.+... ++.++||++||.+......    ...
T Consensus       102 --~~d~vih~A~~~~~-------~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~-~~~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHV-------KISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             --CCSEEEECCSCCCH-------HHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             --CCCEEEECCCcccc-------cccccCHHHHHHHHHHHHHHHHHHHHHhCC-CccceEEEecchhhhCCCCCCCCCcc
Confidence              79999999875431       123567788999999999999999987653 2237899999765433211    111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ....|...|+.||++.+.+++.++.++   ++.+..+.|
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~  207 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGIL  207 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEec
Confidence            122345789999999999999999874   556555543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.83  E-value=8e-20  Score=156.56  Aligned_cols=169  Identities=15%  Similarity=0.108  Sum_probs=120.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH--HhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD--KLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~--~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||+|+||++++++|+++|++|+++.|+.+...+...  .+..  .++.++.+|++|+++++++++      
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK------   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT------
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc------
Confidence            467899999999999999999999999999999998764333222  1221  257889999999988877664      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EG  174 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~  174 (255)
                       ++|++||+|+...      ..  ..+..+..+++|+.++.++++++.+..   ..++||++||.+.......     ..
T Consensus        77 -~~d~Vih~A~~~~------~~--~~~~~~~~~~~nv~gt~~ll~a~~~~~---~~~riV~~SS~~~~~~~~~~~~~~~E  144 (337)
T 2c29_D           77 -GCTGVFHVATPMD------FE--SKDPENEVIKPTIEGMLGIMKSCAAAK---TVRRLVFTSSAGTVNIQEHQLPVYDE  144 (337)
T ss_dssp             -TCSEEEECCCCCC------SS--CSSHHHHTHHHHHHHHHHHHHHHHHHS---CCCEEEEECCGGGTSCSSSCCSEECT
T ss_pred             -CCCEEEEeccccC------CC--CCChHHHHHHHHHHHHHHHHHHHHhCC---CccEEEEeeeHhhcccCCCCCcccCc
Confidence             6899999976431      11  122345689999999999999998753   2478999997642211100     00


Q ss_pred             c----------CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 L----------CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ~----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .          ...|...|+.||.+.+.+++.++++   +|++++++.|
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp  190 (337)
T 2c29_D          145 SCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIP  190 (337)
T ss_dssp             TCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEE
T ss_pred             ccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeC
Confidence            0          0013346999999999988777654   5899999998

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.83  E-value=3.4e-20  Score=159.12  Aligned_cols=175  Identities=18%  Similarity=0.179  Sum_probs=130.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcC-------CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNG-------AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g-------~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      +.+++|+++||||+|+||++++++|+++|       ++|++++|+.+...+    ....++.++.+|++|+++++++++ 
T Consensus        10 ~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~----~~~~~~~~~~~Dl~d~~~~~~~~~-   84 (342)
T 2hrz_A           10 LYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA----GFSGAVDARAADLSAPGEAEKLVE-   84 (342)
T ss_dssp             SCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT----TCCSEEEEEECCTTSTTHHHHHHH-
T ss_pred             CCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc----ccCCceeEEEcCCCCHHHHHHHHh-
Confidence            45789999999999999999999999999       899999998653221    123468889999999998887765 


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccccc-
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACTEI-  172 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~~~-  172 (255)
                           +++|++||+|+...        ..+.++++..+++|+.++.++++++.+...++ +.++||++||......... 
T Consensus        85 -----~~~d~vih~A~~~~--------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~  151 (342)
T 2hrz_A           85 -----ARPDVIFHLAAIVS--------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPY  151 (342)
T ss_dssp             -----TCCSEEEECCCCCH--------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCS
T ss_pred             -----cCCCEEEECCccCc--------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCC
Confidence                 37999999987543        12456788999999999999999998754211 2478999997654332110 


Q ss_pred             ---cCcCCCCCcccccchHHHHHHHHHHHHHh--cccCcEEeEec--cC
Q 025252          173 ---EGLCNIPANYYGVSKFGILGLVKSLAAEL--GRYGIRVDCVS--HT  214 (255)
Q Consensus       173 ---~~~~~~~~~~Y~asKaa~~~~~~~la~e~--~~~gi~v~~v~--p~  214 (255)
                         ......|...|+.||++.+.+++.++.+.  ....+|++.+.  |+
T Consensus       152 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg  200 (342)
T 2hrz_A          152 PIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPG  200 (342)
T ss_dssp             SBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCS
T ss_pred             CcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCC
Confidence               11112245789999999999999988763  22347777776  73

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.83  E-value=6.1e-20  Score=157.46  Aligned_cols=200  Identities=12%  Similarity=0.079  Sum_probs=142.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCH-HHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE-REVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||+|+||++++++|+++ |++|++++|+.....++.   ...++.++.+|++|. +.++++++       ++|+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~-------~~d~   70 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---NHPHFHFVEGDISIHSEWIEYHVK-------KCDV   70 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---TCTTEEEEECCTTTCSHHHHHHHH-------HCSE
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh---cCCCeEEEeccccCcHHHHHhhcc-------CCCE
Confidence            46999999999999999999998 899999999876543321   235788999999984 55666554       5799


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc----C------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE----G------  174 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~----~------  174 (255)
                      +||+|+.....       ...++++..+++|+.++.++++++.+    .+ +++|++||.+........    .      
T Consensus        71 vih~A~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~  138 (345)
T 2bll_A           71 VLPLVAIATPI-------EYTRNPLRVFELDFEENLRIIRYCVK----YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV  138 (345)
T ss_dssp             EEECBCCCCHH-------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT-CEEEEECCGGGGBTCCCSSBCTTTCCCBC
T ss_pred             EEEcccccCcc-------chhcCHHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecHHHcCCCCCCCcCCccccccc
Confidence            99997654311       12346678899999999999998865    23 789999976543221100    0      


Q ss_pred             -cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh-------------h---h-----------------
Q 025252          175 -LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-------------M---A-----------------  220 (255)
Q Consensus       175 -~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-------------t---~-----------------  220 (255)
                       +...|...|+.+|++.+.+++.++++   .|++++++.|+....             .   .                 
T Consensus       139 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (345)
T 2bll_A          139 GPVNKPRWIYSVSKQLLDRVIWAYGEK---EGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  215 (345)
T ss_dssp             CCTTCGGGHHHHHHHHHHHHHHHHHHH---HCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGG
T ss_pred             CcccCcccccHHHHHHHHHHHHHHHHh---cCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECC
Confidence             00122347999999999999999887   488999998833210             0   0                 


Q ss_pred             -----Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 -----EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 -----~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                           ++  ++|++.++..+  +.+.....+|+++.+.+|
T Consensus       216 g~~~~~~i~v~Dva~a~~~~--~~~~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          216 GKQKRCFTDIRDGIEALYRI--IENAGNRCDGEIINIGNP  253 (345)
T ss_dssp             SCCEEECEEHHHHHHHHHHH--HHCGGGTTTTEEEEECCT
T ss_pred             CCEEEEEEEHHHHHHHHHHH--HhhccccCCCceEEeCCC
Confidence                 11  77888888887  444333357888998876

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.83  E-value=2.3e-19  Score=152.12  Aligned_cols=189  Identities=16%  Similarity=0.167  Sum_probs=139.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||+|+||++++++|+++|++|++++|++.... +      .++.++.+|++ .+++.++++       ++|++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~------~~~~~~~~Dl~-~~~~~~~~~-------~~d~V   66 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I------NDYEYRVSDYT-LEDLINQLN-------DVDAV   66 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC------------CCEEEECCCC-HHHHHHHTT-------TCSEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C------CceEEEEcccc-HHHHHHhhc-------CCCEE
Confidence            468999999999999999999999999999999844332 1      16889999999 888777655       79999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPAN  181 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~  181 (255)
                      ||+|+.....           ..+..+++|+.++.++++++..    .+.+++|++||.+......    .......|..
T Consensus        67 ih~a~~~~~~-----------~~~~~~~~n~~~~~~ll~a~~~----~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           67 VHLAATRGSQ-----------GKISEFHDNEILTQNLYDACYE----NNISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             EECCCCCCSS-----------SCGGGTHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             EEccccCCCC-----------ChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9997654311           3456788999999999998864    3456899999765443221    1122334557


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~  228 (255)
                      .|+.+|.+.+.+++.++.+   .|++++.+.| +.+-.+                               ++  .+|++.
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~  207 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRF-AHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAK  207 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEE-CEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEee-CceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHH
Confidence            8999999999999998886   6899999988 432211                               11  778999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      ++..+  +....   .|+++.+.+|
T Consensus       208 a~~~~--~~~~~---~~~~~~i~~~  227 (311)
T 3m2p_A          208 SVIYA--LKQEK---VSGTFNIGSG  227 (311)
T ss_dssp             HHHHH--TTCTT---CCEEEEECCS
T ss_pred             HHHHH--HhcCC---CCCeEEeCCC
Confidence            98888  54433   6788888766

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.83  E-value=1.5e-19  Score=154.55  Aligned_cols=170  Identities=15%  Similarity=0.076  Sum_probs=124.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH-HHHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ-ALADKL-GHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~-~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++||||+|+||++++++|+++|++|++++|+..... ...+.+ ...++.++.+|++|+++++++++..     ++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            5778999999999999999999999999999999865321 111222 2246889999999999999888865     79


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCccccc----ccCcCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTE----IEGLCN  177 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~----~~~~~~  177 (255)
                      |++||+|+....       ..+.++++..+++|+.++.++++++.+.    + .+++|++||.+......    ......
T Consensus        88 d~Vih~A~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~  156 (335)
T 1rpn_A           88 QEVYNLAAQSFV-------GASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPF  156 (335)
T ss_dssp             SEEEECCSCCCH-------HHHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred             CEEEECccccch-------hhhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCC
Confidence            999999874321       1123456788999999999999998764    3 37899999765432211    111222


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .|.+.|+.||++.+.+++.++.++   ++++..+.|
T Consensus       157 ~p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~  189 (335)
T 1rpn_A          157 YPRSPYGVAKLYGHWITVNYRESF---GLHASSGIL  189 (335)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHc---CCcEEEEee
Confidence            345789999999999999998874   566665554

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.83  E-value=9.1e-20  Score=156.73  Aligned_cols=169  Identities=15%  Similarity=0.130  Sum_probs=125.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch----------HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL----------GQALADKLGHQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~----------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+...          .+++.+. ...++.++.+|++|++++++++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL-TGRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH-HTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc-cCCceEEEECCCCCHHHHHHHHHhc
Confidence            5789999999999999999999999999999885432          2222221 1246889999999999988887752


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----  171 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----  171 (255)
                           ++|++||+|+.....       .+.+++++.+++|+.++.++++++..    .+.++||++||.+......    
T Consensus        81 -----~~d~vih~A~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG-------ESVQKPLDYYRVNLTGTIQLLEIMKA----HGVKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             -----CEEEEEECCSCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGGCSCSSSSB
T ss_pred             -----CCCEEEECCCCcCcc-------chhhchHHHHHHHHHHHHHHHHHHHH----hCCCEEEEECcHHHhCCCCCCCc
Confidence                 799999998754311       13456788999999999999987753    3457899999765432210    


Q ss_pred             ccCcCCCC-CcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          172 IEGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       172 ~~~~~~~~-~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .......| ...|+.||++.+.+++.++.+  ..++++..+.|
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~  185 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRY  185 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEE
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEee
Confidence            01111223 478999999999999999987  34588888876

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.81  E-value=7.7e-20  Score=157.92  Aligned_cols=167  Identities=19%  Similarity=0.246  Sum_probs=119.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++|+++||||+|+||++++++|+++| ++|++++|+.....  ...+.  .+. +.+|+++.+.++++++.  ..+++
T Consensus        43 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~~~-~~~d~~~~~~~~~~~~~--~~~~~  115 (357)
T 2x6t_A           43 GIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--DLN-IADYMDKEDFLIQIMAG--EEFGD  115 (357)
T ss_dssp             -----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--TSC-CSEEEEHHHHHHHHHTT--CCCSS
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--Cce-EeeecCcHHHHHHHHhh--cccCC
Confidence            3567899999999999999999999999 99999999765421  11121  223 77899999888777653  12457


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCN  177 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~  177 (255)
                      +|++||+|+....         +.++++..+++|+.++.++++++.+.    +. ++|++||.+......    ......
T Consensus       116 ~d~Vih~A~~~~~---------~~~~~~~~~~~n~~~~~~ll~a~~~~----~~-r~V~~SS~~v~g~~~~~~~~E~~~~  181 (357)
T 2x6t_A          116 VEAIFHEGACSST---------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYE  181 (357)
T ss_dssp             CCEEEECCSCCCT---------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGCSCSSCCCSSGGGC
T ss_pred             CCEEEECCcccCC---------ccCCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEcchHHhCCCCCCCcCCcCCC
Confidence            9999999875431         33457889999999999999999863    34 899999765432211    011112


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .|...|+.+|++.+.+++.++.+   .|++++++.|
T Consensus       182 ~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp  214 (357)
T 2x6t_A          182 KPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRY  214 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEec
Confidence            34578999999999999998876   4788888887

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.81  E-value=3.4e-19  Score=152.05  Aligned_cols=164  Identities=15%  Similarity=0.223  Sum_probs=125.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.....   +.+. .++.++.+|++|++++++++++     .++|++|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vi   72 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE---DAIT-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAVM   72 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSC-TTSEEEECCTTCHHHHHHHHHH-----SCEEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch---hhcC-CCcEEEECCCCCHHHHHHHHhh-----cCCCEEE
Confidence            57999999999999999999999999999998754322   2222 3688899999999998888775     3799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+.....       .+.++++..+++|+.++.++++++.+    .+.+++|++||.+......    .......|...
T Consensus        73 h~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~  141 (330)
T 2c20_A           73 HFAADSLVG-------VSMEKPLQYYNNNVYGALCLLEVMDE----FKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT  141 (330)
T ss_dssp             ECCCCCCHH-------HHHHSHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred             ECCcccCcc-------ccccCHHHHHHHHhHHHHHHHHHHHH----cCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence            998654311       14467788999999999999998754    3457899999765433211    01112234578


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |+.+|++.+.+++.++.+   .|++++++.|
T Consensus       142 Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp  169 (330)
T 2c20_A          142 YGETKLAIEKMLHWYSQA---SNLRYKIFRY  169 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHT---SSCEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHH---hCCcEEEEec
Confidence            999999999999999886   4899999988

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.81  E-value=1.2e-19  Score=154.04  Aligned_cols=196  Identities=15%  Similarity=0.138  Sum_probs=114.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+.+.        .  +  ++.+|++|+++++++++..     ++|++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------~--~--~~~~Dl~d~~~~~~~~~~~-----~~d~v   64 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------P--K--FEQVNLLDSNAVHHIIHDF-----QPHVI   64 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHH-----CCSEE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------C--C--eEEecCCCHHHHHHHHHhh-----CCCEE
Confidence            5789999999999999999999999999999987543        1  2  6789999999988888765     79999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---ccCcCCCCCcc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---IEGLCNIPANY  182 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~~~~~~~~~~~  182 (255)
                      ||+|+....       +.+.+++++.+++|+.++.++++++.+.    + +++|++||........   .......|...
T Consensus        65 ih~A~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~  132 (315)
T 2ydy_A           65 VHCAAERRP-------DVVENQPDAASQLNVDASGNLAKEAAAV----G-AFLIYISSDYVFDGTNPPYREEDIPAPLNL  132 (315)
T ss_dssp             EECC--------------------------CHHHHHHHHHHHHH----T-CEEEEEEEGGGSCSSSCSBCTTSCCCCCSH
T ss_pred             EECCcccCh-------hhhhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchHHHcCCCCCCCCCCCCCCCcCH
Confidence            999875431       2245678899999999999999999863    2 4899999765433210   01112234578


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEec-cCc-----ch----h----hh-----------Hh--HHhhhhhhhhhhc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVS-HTY-----GL----A----MA-----------EA--IASIANAALYNMA  235 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~-p~~-----~~----~----t~-----------~~--~~~~~~~~~~l~~  235 (255)
                      |+.+|++.+.+++.++.++  ..+|++.|. |+.     .+    .    ..           ++  ++|++.++..+  
T Consensus       133 Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~--  208 (315)
T 2ydy_A          133 YGKTKLDGEKAVLENNLGA--AVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQL--  208 (315)
T ss_dssp             HHHHHHHHHHHHHHHCTTC--EEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHhCCCe--EEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHH--
Confidence            9999999999998876443  356776664 210     00    0    00           11  78999988887  


Q ss_pred             cCCC-CCeeeceeEEecCCc
Q 025252          236 KDDD-TSYVGKQNLLVNGGF  254 (255)
Q Consensus       236 ~~~~-~~~~~G~~i~~dgG~  254 (255)
                      +.+. .....|+.+.+.+|.
T Consensus       209 ~~~~~~~~~~~~~~~i~~~~  228 (315)
T 2ydy_A          209 AEKRMLDPSIKGTFHWSGNE  228 (315)
T ss_dssp             HHHHHTCTTCCEEEECCCSC
T ss_pred             HHhhccccCCCCeEEEcCCC
Confidence            4322 122457888888773

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.80  E-value=1.2e-19  Score=154.37  Aligned_cols=165  Identities=16%  Similarity=0.133  Sum_probs=112.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEec-Ccch---HHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNL---GQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r-~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +|+++||||+|+||++++++|+++|++|+++.| +.+.   ...+. ++..  .++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT-NLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHH-TSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHH-hhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            578999999999999999999999999999888 5422   22221 1211  257788999999998877765      


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChH-HHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC---c
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKS-DLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG---L  175 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~-~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~---~  175 (255)
                       ++|++||+|+...         .+.+ .+++++++|+.++.++++++.+..   +.++||++||.+.........   .
T Consensus        74 -~~d~vih~A~~~~---------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~---~~~~iV~~SS~~~~~~~~~~~~~~~  140 (322)
T 2p4h_X           74 -GCVGIFHTASPID---------FAVSEPEEIVTKRTVDGALGILKACVNSK---TVKRFIYTSSGSAVSFNGKDKDVLD  140 (322)
T ss_dssp             -TCSEEEECCCCC-----------------CHHHHHHHHHHHHHHHHHTTCS---SCCEEEEEEEGGGTSCSSSCCSEEC
T ss_pred             -CCCEEEEcCCccc---------CCCCChHHHHHHHHHHHHHHHHHHHHhcC---CccEEEEeccHHHcccCCCCCeecC
Confidence             6899999984221         1112 234689999999999999987541   357899999764221110000   0


Q ss_pred             C-----------CCCCc-ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 C-----------NIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~-----------~~~~~-~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .           ..|.. .|+.||++.+.+.+.++.+   +|++++++.|
T Consensus       141 e~~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp  187 (322)
T 2p4h_X          141 ESDWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLIL  187 (322)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEE
T ss_pred             CccccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcC
Confidence            0           01112 5999999888776665543   6899999998

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.80  E-value=4.3e-19  Score=150.19  Aligned_cols=163  Identities=16%  Similarity=0.151  Sum_probs=125.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +|+++||||+|+||++++++|+++  |++|++++|+..... ..     .++.++.+|++|++++++++++.     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~-----~~~~~~~~D~~d~~~~~~~~~~~-----~~d   70 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV-----NSGPFEVVNALDFNQIEHLVEVH-----KIT   70 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH-----HSSCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc-----CCCceEEecCCCHHHHHHHHhhc-----CCC
Confidence            467999999999999999999999  899999999866532 11     24678999999999998887754     799


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNI  178 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~  178 (255)
                      ++||+|+....        ...++++..+++|+.++.++++++.+    .+.+++|++||.+.......     ......
T Consensus        71 ~vih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~  138 (312)
T 2yy7_A           71 DIYLMAALLSA--------TAEKNPAFAWDLNMNSLFHVLNLAKA----KKIKKIFWPSSIAVFGPTTPKENTPQYTIME  138 (312)
T ss_dssp             EEEECCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHT----TSCSEEECCEEGGGCCTTSCSSSBCSSCBCC
T ss_pred             EEEECCccCCC--------chhhChHHHHHHHHHHHHHHHHHHHH----cCCCEEEEeccHHHhCCCCCCCCccccCcCC
Confidence            99999865431        12356788899999999999998864    34568999997654432111     111234


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      |...|+.+|++.+.+++.++.++   |++++++.|+
T Consensus       139 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~  171 (312)
T 2yy7_A          139 PSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYP  171 (312)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEEC
T ss_pred             CCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCC
Confidence            55789999999999999988764   7899988873

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.80  E-value=1.1e-18  Score=149.53  Aligned_cols=167  Identities=15%  Similarity=0.203  Sum_probs=119.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++||||+|+||++++++|+++|++|++++|...    ..+++.+ ....++.++.+|++|+++++++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIER-LGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHH-HHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHh-hcCCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            6999999999999999999999999999886432    2222222 11246788999999999988887652     699


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIP  179 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~  179 (255)
                      ++||+|+.....       .+.+..++.+++|+.++.++++++.+    .+.++||++||.+......    .......|
T Consensus        76 ~vih~A~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           76 TVIHFAGLKAVG-------ESVQKPLEYYDNNVNGTLRLISAMRA----ANVKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEEECCccCccc-------cchhcHHHHHHHHHHHHHHHHHHHHh----cCCCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            999998754311       12345677899999999999987654    3457899999765432111    00011112


Q ss_pred             -CcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          180 -ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       180 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       ...|++||++.+.+++.++.+.  .++++..+.|
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~  177 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRY  177 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEE
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEee
Confidence             4689999999999999999874  2677766653

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.80  E-value=1.7e-18  Score=139.33  Aligned_cols=183  Identities=14%  Similarity=0.073  Sum_probs=123.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+++|++|++++|+++...++.     .++.++.+|++|+++  +       .++++|++||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-----~~~~~~~~D~~d~~~--~-------~~~~~d~vi~   67 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-----KDINILQKDIFDLTL--S-------DLSDQNVVVD   67 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-----SSSEEEECCGGGCCH--H-------HHTTCSEEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-----CCCeEEeccccChhh--h-------hhcCCCEEEE
Confidence            5999999999999999999999999999999987655432     478899999999876  2       2247999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCCCCcc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNIPANY  182 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~~~~~  182 (255)
                      +|+...    .            ..+.|+.+    .+.+++.+++.+.++++++||.+.......     ......|...
T Consensus        68 ~ag~~~----~------------~~~~~~~~----~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  127 (221)
T 3ew7_A           68 AYGISP----D------------EAEKHVTS----LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPY  127 (221)
T ss_dssp             CCCSST----T------------TTTSHHHH----HHHHHHHHCSCCSSEEEEECCCC-------------------CCC
T ss_pred             CCcCCc----c------------ccchHHHH----HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHH
Confidence            986532    0            12335555    455666666666789999997654322111     0112234467


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      |+.+|++.+.+. .+..  ...|++++.+.| +.+.++                     .+  ++|++.+++.+  +.+.
T Consensus       128 y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--l~~~  201 (221)
T 3ew7_A          128 YPTARAQAKQLE-HLKS--HQAEFSWTYISP-SAMFEPGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDE--IERP  201 (221)
T ss_dssp             SCCHHHHHHHHH-HHHT--TTTTSCEEEEEC-SSCCCCC---------------------CCCHHHHHHHHHHH--HHSC
T ss_pred             HHHHHHHHHHHH-HHHh--hccCccEEEEeC-cceecCCCccCceEeccccceecCCCCceEeHHHHHHHHHHH--HhCc
Confidence            999999998862 2221  157899999999 444321                     01  78999999888  4332


Q ss_pred             CCeeeceeEEecC
Q 025252          240 TSYVGKQNLLVNG  252 (255)
Q Consensus       240 ~~~~~G~~i~~dg  252 (255)
                        ...|+.+.+.|
T Consensus       202 --~~~g~~~~~~~  212 (221)
T 3ew7_A          202 --NHLNEHFTVAG  212 (221)
T ss_dssp             --SCTTSEEECCC
T ss_pred             --cccCCEEEECC
Confidence              24577777765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.79  E-value=6.8e-19  Score=163.85  Aligned_cols=203  Identities=13%  Similarity=0.093  Sum_probs=145.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH-HHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE-VINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~  101 (255)
                      +++|+++||||+|+||++++++|+++ |++|++++|+.....++   ....++.++.+|++|.++ ++++++       +
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~---~~~~~v~~v~~Dl~d~~~~~~~~~~-------~  382 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LNHPHFHFVEGDISIHSEWIEYHVK-------K  382 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG---TTCTTEEEEECCTTTCHHHHHHHHH-------H
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh---ccCCceEEEECCCCCcHHHHHHhhc-------C
Confidence            57889999999999999999999998 89999999987654322   123578899999999764 555544       5


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-c---C---
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-E---G---  174 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-~---~---  174 (255)
                      +|++||+|+.....       ...++++..+++|+.++.++++++.+.    + +++|++||.+....... +   .   
T Consensus       383 ~D~Vih~Aa~~~~~-------~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~-~r~V~~SS~~vyg~~~~~~~~E~~~~  450 (660)
T 1z7e_A          383 CDVVLPLVAIATPI-------EYTRNPLRVFELDFEENLRIIRYCVKY----R-KRIIFPSTSEVYGMCSDKYFDEDHSN  450 (660)
T ss_dssp             CSEEEECCCCCCTH-------HHHHSHHHHHHHHTHHHHHHHHHHHHT----T-CEEEEECCGGGGBTCCSSSBCTTTCC
T ss_pred             CCEEEECceecCcc-------ccccCHHHHHHhhhHHHHHHHHHHHHh----C-CEEEEEecHHHcCCCCCcccCCCccc
Confidence            89999997654311       123466789999999999999988752    3 78999997654322110 0   0   


Q ss_pred             ----cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchh-------------h---h--------------
Q 025252          175 ----LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLA-------------M---A--------------  220 (255)
Q Consensus       175 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~-------------t---~--------------  220 (255)
                          +...|.+.|+.||.+.+.+++.++.+.   |++++++.|+....             .   +              
T Consensus       451 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  527 (660)
T 1z7e_A          451 LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKL  527 (660)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEE
T ss_pred             cccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEE
Confidence                011234579999999999999998774   88999999843210             0   0              


Q ss_pred             --------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 --------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 --------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                              .+  ++|++.++..+  +.....+.+|+++.+++|
T Consensus       528 ~g~g~~~~~~i~v~Dva~ai~~~--l~~~~~~~~g~~~ni~~~  568 (660)
T 1z7e_A          528 IDGGKQKRCFTDIRDGIEALYRI--IENAGNRCDGEIINIGNP  568 (660)
T ss_dssp             EGGGCCEEECEEHHHHHHHHHHH--HHCGGGTTTTEEEEECCG
T ss_pred             eCCCCeEEEEEEHHHHHHHHHHH--HhCccccCCCeEEEECCC
Confidence                    01  78888888877  444433467899999886

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.79  E-value=7.5e-20  Score=146.73  Aligned_cols=175  Identities=13%  Similarity=0.040  Sum_probs=130.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++|+++||||+|+||++++++|+++|+  +|++++|++..        ...++.++.+|++|++++++++         +
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~--------~~~~~~~~~~D~~~~~~~~~~~---------~   66 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA--------EHPRLDNPVGPLAELLPQLDGS---------I   66 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC--------CCTTEECCBSCHHHHGGGCCSC---------C
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc--------cCCCceEEeccccCHHHHHHhh---------h
Confidence            567899999999999999999999998  99999998765        1246788899998877655443         8


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |++||+|+....         +.+++++.+++|+.++.++++++.+.    +.++++++||.+...         .|...
T Consensus        67 d~vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~v~~Ss~~~~~---------~~~~~  124 (215)
T 2a35_A           67 DTAFCCLGTTIK---------EAGSEEAFRAVDFDLPLAVGKRALEM----GARHYLVVSALGADA---------KSSIF  124 (215)
T ss_dssp             SEEEECCCCCHH---------HHSSHHHHHHHHTHHHHHHHHHHHHT----TCCEEEEECCTTCCT---------TCSSH
T ss_pred             cEEEECeeeccc---------cCCCHHHHHHhhHHHHHHHHHHHHHc----CCCEEEEECCcccCC---------CCccH
Confidence            999999865431         23567788999999999999988653    456899999665432         12257


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcE-EeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhccC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIR-VDCVSHTYGLAMA----------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~-v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      |+.+|++.+.+++.       .|++ ++.+.| +.+.++                      ++  ++|++.++..+  +.
T Consensus       125 y~~sK~~~e~~~~~-------~~~~~~~~vrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--~~  194 (215)
T 2a35_A          125 YNRVKGELEQALQE-------QGWPQLTIARP-SLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRL--AL  194 (215)
T ss_dssp             HHHHHHHHHHHHTT-------SCCSEEEEEEC-CSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHH--HT
T ss_pred             HHHHHHHHHHHHHH-------cCCCeEEEEeC-ceeeCCCCcchHHHHHHHhhhhccCCCcCcEeHHHHHHHHHHH--Hh
Confidence            99999999988764       3888 999999 443322                      11  78889888887  44


Q ss_pred             CCCCeeeceeEEecC
Q 025252          238 DDTSYVGKQNLLVNG  252 (255)
Q Consensus       238 ~~~~~~~G~~i~~dg  252 (255)
                      +..    |+.+.+.+
T Consensus       195 ~~~----~~~~~i~~  205 (215)
T 2a35_A          195 EEG----KGVRFVES  205 (215)
T ss_dssp             CCC----SEEEEEEH
T ss_pred             cCC----CCceEEcH
Confidence            332    55566554

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.79  E-value=6e-19  Score=151.10  Aligned_cols=167  Identities=14%  Similarity=0.126  Sum_probs=113.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH--HHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL--ADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~--~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+++||||+|+||++++++|+++|++|+++.|+.+...+.  ...+. ..++.++.+|++|+++++++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            68899999999999999999999999999988875532111  11121 2468889999999888777654       68


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-c------ccCc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-E------IEGL  175 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-~------~~~~  175 (255)
                      |++||+|+...      ..  ..+..++.+++|+.++.++++++.+..   +.++||++||.+..... .      ....
T Consensus        82 D~Vih~A~~~~------~~--~~~~~~~~~~~nv~gt~~ll~aa~~~~---~v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           82 DFVFHVATPVH------FA--SEDPENDMIKPAIQGVVNVMKACTRAK---SVKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             SEEEEESSCCC------C-----------CHHHHHHHHHHHHHHHHCT---TCCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CEEEEeCCccC------CC--CCCcHHHHHHHHHHHHHHHHHHHHHcC---CcCEEEEEecHHHeecCCcCCCCcccChh
Confidence            99999976432      10  112224589999999999999997642   24689999965421100 0      0000


Q ss_pred             ---------CCC-CCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 ---------CNI-PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ---------~~~-~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                               +.. +...|+.||++.+.+++.++++   +|++++++.|
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp  195 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIP  195 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEE
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeC
Confidence                     000 1125999999999888777654   5899999988

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.79  E-value=6.3e-19  Score=147.96  Aligned_cols=186  Identities=18%  Similarity=0.177  Sum_probs=133.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ..++++||||+|+||++++++|+++|++|++++|+                   .+|++|++++++++++.     ++|+
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~Dl~d~~~~~~~~~~~-----~~d~   66 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-------------------DLDITNVLAVNKFFNEK-----KPNV   66 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-------------------cCCCCCHHHHHHHHHhc-----CCCE
Confidence            46789999999999999999999999999999986                   27999999998888765     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPA  180 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~  180 (255)
                      +||+|+....       +.+.+++++.+++|+.++.++++++.+.    +. ++|++||.+......    .......|.
T Consensus        67 vih~A~~~~~-------~~~~~~~~~~~~~nv~~~~~l~~a~~~~----~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           67 VINCAAHTAV-------DKCEEQYDLAYKINAIGPKNLAAAAYSV----GA-EIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             EEECCCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHH----TC-EEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             EEECCccCCH-------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEechHHeECCCCCCCCCCCCCCCCc
Confidence            9999865321       1234678899999999999999999763    33 899999764332211    111112345


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEec-cC-cchhhh------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVS-HT-YGLAMA------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~-p~-~~~~t~------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+.+|++.+.+++.++.+  -..+|...+. |+ ..+..-                  ++  ++|++.++..+  +.+
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~~--~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~--~~~  210 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNPK--YYIVRTAWLYGDGNNFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKV--IDE  210 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCSS--EEEEEECSEESSSSCHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHH--HHH
T ss_pred             cHHHHHHHHHHHHHHhhCCC--eEEEeeeeeeCCCcChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHH--Hhc
Confidence            78999999999998887642  1234544443 10 111100                  11  78999999888  443


Q ss_pred             CCCeeeceeEEecCCc
Q 025252          239 DTSYVGKQNLLVNGGF  254 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG~  254 (255)
                      .    +|+.+.+++|-
T Consensus       211 ~----~~~~~~i~~~~  222 (292)
T 1vl0_A          211 K----NYGTFHCTCKG  222 (292)
T ss_dssp             T----CCEEEECCCBS
T ss_pred             C----CCcEEEecCCC
Confidence            2    58888888763

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.78  E-value=2.1e-18  Score=161.56  Aligned_cols=175  Identities=15%  Similarity=0.205  Sum_probs=125.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +.+++|+++||||+|+||++++++|+++|++|++++|+.....+..   ..+...++.++.+|+++++++++++++.   
T Consensus         7 ~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---   83 (699)
T 1z45_A            7 SESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY---   83 (699)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS---
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC---
Confidence            4578899999999999999999999999999999998754321111   1122356888999999999988887753   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-------
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-------  171 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-------  171 (255)
                        ++|++||+|+.....       ...+..++.+++|+.++.++++++..    .+.++||++||.+......       
T Consensus        84 --~~D~Vih~A~~~~~~-------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~~~iV~~SS~~vyg~~~~~~~~~~  150 (699)
T 1z45_A           84 --KIDSVIHFAGLKAVG-------ESTQIPLRYYHNNILGTVVLLELMQQ----YNVSKFVFSSSATVYGDATRFPNMIP  150 (699)
T ss_dssp             --CCCEEEECCSCCCHH-------HHHHSHHHHHHHHHHHHHHHHHHHHH----HTCCEEEEEEEGGGGCCGGGSTTCCS
T ss_pred             --CCCEEEECCcccCcC-------ccccCHHHHHHHHHHHHHHHHHHHHH----cCCCEEEEECcHHHhCCCccccccCC
Confidence              799999998754311       11234467899999999999887754    3457899999765432111       


Q ss_pred             -ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          172 -IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       172 -~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       .......|...|+.||++.+.+++.++.+. ..++++.++.|
T Consensus       151 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~  192 (699)
T 1z45_A          151 IPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRY  192 (699)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEE
T ss_pred             ccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEe
Confidence             011122345789999999999999998875 35788888875

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.78  E-value=1.6e-18  Score=148.83  Aligned_cols=165  Identities=19%  Similarity=0.176  Sum_probs=117.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH-hCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK-LGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+++|+++||||+|+||++++++|+++|++|++++|+.....+.... ....++.++.+|+++..            +.+
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~~   91 (343)
T 2b69_A           24 EKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YIE   91 (343)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CCC
T ss_pred             ccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hcC
Confidence            36788999999999999999999999999999999875422111111 12346889999998752            357


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---c-cC---
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---I-EG---  174 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~-~~---  174 (255)
                      +|++||+|+......       ..++++..+++|+.++.++++++.+.    + .++|++||.+......   . ..   
T Consensus        92 ~d~vih~A~~~~~~~-------~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           92 VDQIYHLASPASPPN-------YMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             CSEEEECCSCCSHHH-------HTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             CCEEEECccccCchh-------hhhCHHHHHHHHHHHHHHHHHHHHHh----C-CcEEEECcHHHhCCCCCCCCcccccc
Confidence            999999986543110       12345678899999999999998753    2 3899999764432111   0 00   


Q ss_pred             --cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          175 --LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       175 --~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                        .+..|...|+.+|++.+.+++.++.+   .|++++++.|+
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~  198 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARIF  198 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEEC
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHH---hCCcEEEEEEc
Confidence              12234467999999999999998876   48889998883

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.77  E-value=2.6e-18  Score=145.72  Aligned_cols=157  Identities=18%  Similarity=0.254  Sum_probs=120.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           28 VAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +++||||+|+||++++++|+++  |++|++++|+.....         ++.++.+|++|++++++++++.     ++|++
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~---------~~~~~~~D~~d~~~~~~~~~~~-----~~d~v   66 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG---------GIKFITLDVSNRDEIDRAVEKY-----SIDAI   66 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT---------TCCEEECCTTCHHHHHHHHHHT-----TCCEE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc---------CceEEEecCCCHHHHHHHHhhc-----CCcEE
Confidence            3899999999999999999998  899999998765421         4668899999999998887752     79999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCCCC
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNIPA  180 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~~~  180 (255)
                      ||+|+....        ...++++..+++|+.++.++++++.+    .+.+++|++||.+.......     ......|.
T Consensus        67 ih~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~  134 (317)
T 3ajr_A           67 FHLAGILSA--------KGEKDPALAYKVNMNGTYNILEAAKQ----HRVEKVVIPSTIGVFGPETPKNKVPSITITRPR  134 (317)
T ss_dssp             EECCCCCHH--------HHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCC
T ss_pred             EECCcccCC--------ccccChHHHhhhhhHHHHHHHHHHHH----cCCCEEEEecCHHHhCCCCCCCCccccccCCCC
Confidence            999765421        12356788899999999999998865    34568999997654432110     11122356


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..|+.||++.+.+++.++.+   .|++++++.|
T Consensus       135 ~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~  164 (317)
T 3ajr_A          135 TMFGVTKIAAELLGQYYYEK---FGLDVRSLRY  164 (317)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHh---cCCeEEEEec
Confidence            78999999999999988776   5788888864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.77  E-value=4.9e-18  Score=136.99  Aligned_cols=184  Identities=10%  Similarity=0.015  Sum_probs=126.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+++|++|++++|+++...++    ...++.++.+|++|+++         +.++++|++||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----~~~~~~~~~~D~~d~~~---------~~~~~~d~vi~   68 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR----LGATVATLVKEPLVLTE---------ADLDSVDAVVD   68 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----TCTTSEEEECCGGGCCH---------HHHTTCSEEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc----cCCCceEEecccccccH---------hhcccCCEEEE
Confidence            599999999999999999999999999999997765543    23578999999999887         12358999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc-------CcCCCCC
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE-------GLCNIPA  180 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~-------~~~~~~~  180 (255)
                      +|+...    .   . .      ..++|+.++    +.+++.+++.+ +++|++||.+........       .....|.
T Consensus        69 ~ag~~~----~---~-~------~~~~n~~~~----~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~  129 (224)
T 3h2s_A           69 ALSVPW----G---S-G------RGYLHLDFA----THLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQ  129 (224)
T ss_dssp             CCCCCT----T---S-S------CTHHHHHHH----HHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGS
T ss_pred             CCccCC----C---c-c------hhhHHHHHH----HHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccc
Confidence            986541    0   0 0      124466665    55666666666 899999966432211110       0111124


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      ..|+.+|++.+.+    ....+..|++++.+.| +.+.++                    .+  ++|++.+++.+  +.+
T Consensus       130 ~~y~~sK~~~e~~----~~~~~~~~i~~~ivrp-~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~--l~~  202 (224)
T 3h2s_A          130 PWYDGALYQYYEY----QFLQMNANVNWIGISP-SEAFPSGPATSYVAGKDTLLVGEDGQSHITTGNMALAILDQ--LEH  202 (224)
T ss_dssp             TTHHHHHHHHHHH----HHHTTCTTSCEEEEEE-CSBCCCCCCCCEEEESSBCCCCTTSCCBCCHHHHHHHHHHH--HHS
T ss_pred             hhhHHHHHHHHHH----HHHHhcCCCcEEEEcC-ccccCCCcccCceecccccccCCCCCceEeHHHHHHHHHHH--hcC
Confidence            6799999988854    2223467999999999 544322                    12  89999999988  433


Q ss_pred             CCCeeeceeEEecC
Q 025252          239 DTSYVGKQNLLVNG  252 (255)
Q Consensus       239 ~~~~~~G~~i~~dg  252 (255)
                      .  ...|+++.+.|
T Consensus       203 ~--~~~g~~~~~~~  214 (224)
T 3h2s_A          203 P--TAIRDRIVVRD  214 (224)
T ss_dssp             C--CCTTSEEEEEE
T ss_pred             c--cccCCEEEEec
Confidence            2  24577776643

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.76  E-value=5.7e-19  Score=149.82  Aligned_cols=192  Identities=15%  Similarity=0.095  Sum_probs=130.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+++||||+|+||++++++|+++|++|++++|+..    ....+.......++.++.+|++                
T Consensus         5 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~----------------   68 (321)
T 3vps_A            5 TLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS----------------   68 (321)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT----------------
T ss_pred             cCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc----------------
Confidence            56789999999999999999999999999999999865    2211111111234555666655                


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCc
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGL  175 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~  175 (255)
                       ++|++||+|+......       ..+.....++ |+.++.++++++.+.    +.+++|++||.+......    ....
T Consensus        69 -~~d~vi~~a~~~~~~~-------~~~~~~~~~~-n~~~~~~ll~a~~~~----~v~~~v~~SS~~v~~~~~~~~~~E~~  135 (321)
T 3vps_A           69 -DVRLVYHLASHKSVPR-------SFKQPLDYLD-NVDSGRHLLALCTSV----GVPKVVVGSTCEVYGQADTLPTPEDS  135 (321)
T ss_dssp             -TEEEEEECCCCCCHHH-------HTTSTTTTHH-HHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCSSSSBCTTS
T ss_pred             -cCCEEEECCccCChHH-------HHhCHHHHHH-HHHHHHHHHHHHHHc----CCCeEEEecCHHHhCCCCCCCCCCCC
Confidence             6899999976543210       1122233455 999999999988654    346899999765433211    1122


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCc-EEeEeccCcchhhh-------------------------------Hh-
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGI-RVDCVSHTYGLAMA-------------------------------EA-  222 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi-~v~~v~p~~~~~t~-------------------------------~~-  222 (255)
                      ...|...|+.+|.+.+.+++.++.+   .|+ +++.+.| +.+..+                               ++ 
T Consensus       136 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  211 (321)
T 3vps_A          136 PLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRF-FNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFT  211 (321)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEE-CEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEE
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEe-ccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceE
Confidence            2345578999999999999998876   588 8999888 432211                               11 


Q ss_pred             -HHhhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          223 -IASIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       223 -~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                       ++|++.++..+  +.+...   | .+.+.+|-
T Consensus       212 ~v~Dva~~~~~~--~~~~~~---g-~~~i~~~~  238 (321)
T 3vps_A          212 YITDVVDKLVAL--ANRPLP---S-VVNFGSGQ  238 (321)
T ss_dssp             EHHHHHHHHHHG--GGSCCC---S-EEEESCSC
T ss_pred             EHHHHHHHHHHH--HhcCCC---C-eEEecCCC
Confidence             78999999888  544432   7 88888763

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.76  E-value=3.2e-18  Score=143.32  Aligned_cols=177  Identities=19%  Similarity=0.166  Sum_probs=129.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||+|+||++++++|+++|++|++++|.                   ++|++|.+++++++++.     ++|++|
T Consensus         6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-------------------~~D~~d~~~~~~~~~~~-----~~d~vi   61 (287)
T 3sc6_A            6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-------------------LLDITNISQVQQVVQEI-----RPHIII   61 (287)
T ss_dssp             EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-------------------TSCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-------------------ccCCCCHHHHHHHHHhc-----CCCEEE
Confidence            479999999999999999999999999999982                   37999999999988875     799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~  182 (255)
                      |+|+....       +.+.++++..+++|+.++.++++++.+.    + .++|++||........    .......|.+.
T Consensus        62 ~~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  129 (287)
T 3sc6_A           62 HCAAYTKV-------DQAEKERDLAYVINAIGARNVAVASQLV----G-AKLVYISTDYVFQGDRPEGYDEFHNPAPINI  129 (287)
T ss_dssp             ECCCCCCH-------HHHTTCHHHHHHHHTHHHHHHHHHHHHH----T-CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSH
T ss_pred             ECCcccCh-------HHHhcCHHHHHHHHHHHHHHHHHHHHHc----C-CeEEEEchhhhcCCCCCCCCCCCCCCCCCCH
Confidence            99875531       1123567889999999999999998654    2 3699999765432211    11122345678


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~~~l  233 (255)
                      |+.+|.+.+.+++.++.+       +..+.| +.+..+                           ++  ++|++.++..+
T Consensus       130 Y~~sK~~~E~~~~~~~~~-------~~ilR~-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~  201 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHNK-------YFIVRT-SWLYGKYGNNFVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKL  201 (287)
T ss_dssp             HHHHHHHHHHHHHHHCSS-------EEEEEE-CSEECSSSCCHHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCC-------cEEEee-eeecCCCCCcHHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHH
Confidence            999999999998877552       345555 222111                           11  79999999888


Q ss_pred             hccCCCCCeeeceeEEecCC
Q 025252          234 MAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG  253 (255)
                        +.+..    ++.+.+.+|
T Consensus       202 --~~~~~----~~~~~i~~~  215 (287)
T 3sc6_A          202 --IHTSL----YGTYHVSNT  215 (287)
T ss_dssp             --HTSCC----CEEEECCCB
T ss_pred             --HhCCC----CCeEEEcCC
Confidence              54433    557777665

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.75  E-value=8.7e-18  Score=141.89  Aligned_cols=161  Identities=19%  Similarity=0.228  Sum_probs=117.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchH--HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLG--QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +++||||+|+||++++++|+++| ++|++++|+....  ..+.      ++. +.+|+++.+.++++++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            38999999999999999999999 9999999876542  2111      122 6789998888776654110  126999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPA  180 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~  180 (255)
                      +||+|+....         +.++++..+++|+.++.++++++.+.    +. ++|++||.+......    .......|.
T Consensus        72 vi~~a~~~~~---------~~~~~~~~~~~n~~~~~~l~~a~~~~----~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~  137 (310)
T 1eq2_A           72 IFHEGACSST---------TEWDGKYMMDNNYQYSKELLHYCLER----EI-PFLYASSAATYGGRTSDFIESREYEKPL  137 (310)
T ss_dssp             EEECCSCCCT---------TCCCHHHHHHHTHHHHHHHHHHHHHH----TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             EEECcccccC---------cccCHHHHHHHHHHHHHHHHHHHHHc----CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCC
Confidence            9999765431         23456788999999999999998764    34 899999765432211    111122345


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      ..|+.+|.+.+.+++.++.+   .|++++++.|+
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~  168 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYF  168 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEEC
T ss_pred             ChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCC
Confidence            78999999999999988765   58899999883

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.74  E-value=2.6e-18  Score=144.60  Aligned_cols=183  Identities=15%  Similarity=0.093  Sum_probs=129.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+ +|++|++++|+..               ++.+|++|+++++++++..     ++|++||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~---------------~~~~D~~d~~~~~~~~~~~-----~~d~vih   60 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK---------------EFCGDFSNPKGVAETVRKL-----RPDVIVN   60 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS---------------SSCCCTTCHHHHHHHHHHH-----CCSEEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc---------------cccccCCCHHHHHHHHHhc-----CCCEEEE
Confidence            69999999999999999999 8999999999762               3568999999998888754     6999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCCCccc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIPANYY  183 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~~~~Y  183 (255)
                      +|+.....       .+.++++..+++|+.++.++++++.+    .+ .++|++||.+......    .......|.+.|
T Consensus        61 ~a~~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y  128 (299)
T 1n2s_A           61 AAAHTAVD-------KAESEPELAQLLNATSVEAIAKAANE----TG-AWVVHYSTDYVFPGTGDIPWQETDATSPLNVY  128 (299)
T ss_dssp             CCCCCCHH-------HHTTCHHHHHHHHTHHHHHHHHHHTT----TT-CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred             CcccCCHh-------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC-CcEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence            97654311       12345678899999999999998843    23 3799999765433211    111223445789


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------Hh--HHhhhhhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------EA--IASIANAALYNM  234 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------~~--~~~~~~~~~~l~  234 (255)
                      +.+|++.+.+++.++.       +++.+.| +.+.++                           ++  ++|++.++..+ 
T Consensus       129 ~~sK~~~E~~~~~~~~-------~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~-  199 (299)
T 1n2s_A          129 GKTKLAGEKALQDNCP-------KHLIFRT-SWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHA-  199 (299)
T ss_dssp             HHHHHHHHHHHHHHCS-------SEEEEEE-CSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHhCC-------CeEEEee-eeecCCCcCcHHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHH-
Confidence            9999999998877643       5667776 332111                           01  68888888877 


Q ss_pred             ccCCCCCee-eceeEEecCC
Q 025252          235 AKDDDTSYV-GKQNLLVNGG  253 (255)
Q Consensus       235 ~~~~~~~~~-~G~~i~~dgG  253 (255)
                       +.+..... .|+.+.+.+|
T Consensus       200 -~~~~~~~~~~~~~~~i~~~  218 (299)
T 1n2s_A          200 -IRVALNKPEVAGLYHLVAG  218 (299)
T ss_dssp             -HHHHHHCGGGCEEEECCCB
T ss_pred             -HHHhccccccCceEEEeCC
Confidence             33221112 4777887776

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.74  E-value=1.9e-18  Score=144.77  Aligned_cols=187  Identities=14%  Similarity=0.078  Sum_probs=130.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |++|+++||| +|+||++++++|+++|++|++++|+.+..        ..++.++.+|++|+++++++++      +++|
T Consensus         1 M~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            1 MSLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM--------PAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             -CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC--------CTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccCCceEEccCCChHHHHHhhc------CCCC
Confidence            3567899999 59999999999999999999999987652        2578899999999988777654      3699


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCcCCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGLCNIP  179 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~~~~~  179 (255)
                      ++||+|+..            ..+.+..+++|+.++.++++++.    +.+.+++|++||.+......    .......|
T Consensus        66 ~vih~a~~~------------~~~~~~~~~~n~~~~~~ll~a~~----~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p  129 (286)
T 3gpi_A           66 ILVYCVAAS------------EYSDEHYRLSYVEGLRNTLSALE----GAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIA  129 (286)
T ss_dssp             EEEECHHHH------------HHC-----CCSHHHHHHHHHHTT----TSCCCEEEEEEEGGGCCCCCSSEECTTSCCCC
T ss_pred             EEEEeCCCC------------CCCHHHHHHHHHHHHHHHHHHHh----hCCCCEEEEEcccEEEcCCCCCCCCCCCCCCC
Confidence            999987532            23456778999999988888774    34557899999765443221    11223345


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                      .+.|+.+|.+.+.+ +..        ++++.+.| +.+..+                      ++  .+|++.++..+  
T Consensus       130 ~~~Y~~sK~~~E~~-~~~--------~~~~ilR~-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~--  197 (286)
T 3gpi_A          130 KDFSGKRMLEAEAL-LAA--------YSSTILRF-SGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYL--  197 (286)
T ss_dssp             CSHHHHHHHHHHHH-GGG--------SSEEEEEE-CEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHH--
T ss_pred             CChhhHHHHHHHHH-Hhc--------CCeEEEec-ccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHH--
Confidence            67899999999987 442        66777776 332111                      11  78999998888  


Q ss_pred             cCCCCCeeeceeEEecCC
Q 025252          236 KDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG  253 (255)
                      +........|+++.+.+|
T Consensus       198 ~~~~~~~~~~~~~~~~~~  215 (286)
T 3gpi_A          198 IQQRSHAVPERLYIVTDN  215 (286)
T ss_dssp             HHHHTTSCCCSEEEECCS
T ss_pred             HhhhccCCCCceEEEeCC
Confidence            433222345777887765

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.74  E-value=3.2e-17  Score=139.21  Aligned_cols=155  Identities=14%  Similarity=0.199  Sum_probs=116.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |++|+++||||+|+||++++++|+++|++|++++|+.                  .+|++|.+++++++++.     ++|
T Consensus         1 M~~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~------------------~~D~~d~~~~~~~~~~~-----~~d   57 (321)
T 1e6u_A            1 MAKQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD------------------ELNLLDSRAVHDFFASE-----RID   57 (321)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc------------------cCCccCHHHHHHHHHhc-----CCC
Confidence            3568899999999999999999999999999988752                  27999999998888765     799


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---c-cCc----
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---I-EGL----  175 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~-~~~----  175 (255)
                      ++||+|+....      .....++.+..+++|+.++.++++++.+    .+.+++|++||.+......   . ...    
T Consensus        58 ~vih~a~~~~~------~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~  127 (321)
T 1e6u_A           58 QVYLAAAKVGG------IVANNTYPADFIYQNMMIESNIIHAAHQ----NDVNKLLFLGSSCIYPKLAKQPMAESELLQG  127 (321)
T ss_dssp             EEEECCCCCCC------HHHHHHCHHHHHHHHHHHHHHHHHHHHH----TTCCEEEEECCGGGSCTTCCSSBCGGGTTSS
T ss_pred             EEEEcCeecCC------cchhhhCHHHHHHHHHHHHHHHHHHHHH----hCCCeEEEEccHHHcCCCCCCCcCccccccC
Confidence            99999764321      0113456678899999999999998865    2346899999765443211   0 000    


Q ss_pred             CCCCC-cccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          176 CNIPA-NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       176 ~~~~~-~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      ...|. ..|+.+|.+.+.+++.++.+   .|++++++.|+
T Consensus       128 ~~~p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilrp~  164 (321)
T 1e6u_A          128 TLEPTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMPT  164 (321)
T ss_dssp             CCCGGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEEC
T ss_pred             CCCCCCCccHHHHHHHHHHHHHHHHH---hCCCEEEEEeC
Confidence            12222 47999999999999999876   38899999883

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.74  E-value=9.5e-18  Score=151.62  Aligned_cols=195  Identities=16%  Similarity=0.102  Sum_probs=137.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHH-----------hCCCceEEEEeeCCCHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL---GQALADK-----------LGHQDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~   90 (255)
                      ..|+++||||+|+||++++++|.+.|++|++++|+...   ..++.+.           ....++.++.+|+++++++. 
T Consensus       149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-  227 (508)
T 4f6l_B          149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-  227 (508)
T ss_dssp             CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred             CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence            35789999999999999999999999999999998773   2222111           11258999999999987766 


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT  170 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~  170 (255)
                             ...++|++||+|+...          ....++..+++|+.++.++++.+.+     +..+++++||.+. +..
T Consensus       228 -------~~~~~D~Vih~Aa~~~----------~~~~~~~~~~~Nv~gt~~ll~~a~~-----~~~~~v~iSS~~v-G~~  284 (508)
T 4f6l_B          228 -------LPENMDTIIHAGARTD----------HFGDDDEFEKVNVQGTVDVIRLAQQ-----HHARLIYVSTISV-GTY  284 (508)
T ss_dssp             -------CSSCCSEEEECCCC------------------CCHHHHHHHHHHHHHHHHT-----TTCEEEEEEESCT-TSE
T ss_pred             -------CccCCCEEEECCceec----------CCCCHHHHhhhHHHHHHHHHHHHHh-----CCCcEEEeCChhh-ccC
Confidence                   2358999999986543          1235677889999999999998865     3478999997765 110


Q ss_pred             cc---------cC---cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------
Q 025252          171 EI---------EG---LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------  220 (255)
Q Consensus       171 ~~---------~~---~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------  220 (255)
                      ..         ..   ....|...|+.+|.+.+.+++.++.    .|++++.+.|+. +..+                  
T Consensus       285 ~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~-v~G~~~~~~~~~~~~~~~~~~~  359 (508)
T 4f6l_B          285 FDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGN-LTSPYNGRWHMRNIKTNRFSMV  359 (508)
T ss_dssp             ECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECC-EESCSSSCCCCTTCTTCHHHHH
T ss_pred             CccCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecce-eccCCCCCcccCCcchHHHHHH
Confidence            00         00   0122457899999999999887653    689999999832 2110                  


Q ss_pred             -------------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          221 -------------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       221 -------------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                                         .+  .++++.+++.+  +....   .|+++.+.+|
T Consensus       360 i~~~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~--~~~~~---~~~~~nl~~~  408 (508)
T 4f6l_B          360 MNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVAL--AQVNT---PQIIYHVLSP  408 (508)
T ss_dssp             HHHHTTCSEEETTGGGSEEECEEHHHHHHHHHHH--TTBCC---SCSEEEESCS
T ss_pred             HHHHHHcCCCCCCccCceEEEEcHHHHHHHHHHH--HhCCC---CCCEEEeCCC
Confidence                               01  68899999888  54333   6888888776

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.73  E-value=1.4e-17  Score=138.25  Aligned_cols=185  Identities=16%  Similarity=0.141  Sum_probs=132.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++||||+|+||++++++|+ +|++|++++|+++..       .  +   +.+|++|+++++++++..     ++|++||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~-------~--~---~~~Dl~~~~~~~~~~~~~-----~~d~vi~   63 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ-------G--G---YKLDLTDFPRLEDFIIKK-----RPDVIIN   63 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT-------T--C---EECCTTSHHHHHHHHHHH-----CCSEEEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC-------C--C---ceeccCCHHHHHHHHHhc-----CCCEEEE
Confidence            59999999999999999999 589999999987531       1  2   889999999999988865     7999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---cCcCCCCCcccc
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EGLCNIPANYYG  184 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---~~~~~~~~~~Y~  184 (255)
                      +|+....       +.+.+++++.+++|+.++.++++++.+    . ++++|++||.+.......   ......|...|+
T Consensus        64 ~a~~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~-~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~  131 (273)
T 2ggs_A           64 AAAMTDV-------DKCEIEKEKAYKINAEAVRHIVRAGKV----I-DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYG  131 (273)
T ss_dssp             CCCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHH----T-TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred             CCcccCh-------hhhhhCHHHHHHHhHHHHHHHHHHHHH----h-CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence            9875431       123567889999999999999999965    2 358999997654322110   111123457899


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEecc-Ccchhh-----------------hHh--HHhhhhhhhhhhccCCCCCeee
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSH-TYGLAM-----------------AEA--IASIANAALYNMAKDDDTSYVG  244 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p-~~~~~t-----------------~~~--~~~~~~~~~~l~~~~~~~~~~~  244 (255)
                      .+|++.+.+++.    +....+|++.|.- ......                 .++  ++|++.++.++  +++..   +
T Consensus       132 ~sK~~~e~~~~~----~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~--~~~~~---~  202 (273)
T 2ggs_A          132 LSKLLGETFALQ----DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAFKGYYSPISARKLASAILEL--LELRK---T  202 (273)
T ss_dssp             HHHHHHHHHHCC----TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHH--HHHTC---C
T ss_pred             HHHHHHHHHHhC----CCeEEEeccccccccHHHHHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHH--HhcCc---C
Confidence            999999999877    3345677777651 011100                 012  88999999888  43321   4


Q ss_pred             ceeEEecC
Q 025252          245 KQNLLVNG  252 (255)
Q Consensus       245 G~~i~~dg  252 (255)
                      | ++.++|
T Consensus       203 g-~~~i~~  209 (273)
T 2ggs_A          203 G-IIHVAG  209 (273)
T ss_dssp             E-EEECCC
T ss_pred             C-eEEECC
Confidence            5 677765

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.73  E-value=4.4e-17  Score=146.22  Aligned_cols=167  Identities=15%  Similarity=0.131  Sum_probs=121.1

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHc---CCEEEEEecCcchHH---HHHHHhCC--------------CceEEEEeeC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKN---GAKVVIADVQDNLGQ---ALADKLGH--------------QDVCYIHCDV   82 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~---g~~v~~~~r~~~~~~---~~~~~~~~--------------~~~~~~~~D~   82 (255)
                      ...+|+++||||+|+||++++++|+++   |++|++++|+.....   ++.+.+..              .++.++.+|+
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl  149 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDK  149 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCT
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeEC
Confidence            357899999999999999999999999   899999999876432   22222222              5799999999


Q ss_pred             C------CHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC
Q 025252           83 S------NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG  156 (255)
Q Consensus        83 ~------~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~  156 (255)
                      +      +.+.++++++       ++|++||+|+....           +.+++.+++|+.++.++++++.+    .+.+
T Consensus       150 ~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~-----------~~~~~~~~~Nv~gt~~ll~aa~~----~~~~  207 (478)
T 4dqv_A          150 SEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA-----------FPYHELFGPNVAGTAELIRIALT----TKLK  207 (478)
T ss_dssp             TSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB-----------SSCCEEHHHHHHHHHHHHHHHTS----SSCC
T ss_pred             CCcccCCCHHHHHHHHc-------CCCEEEECccccCC-----------cCHHHHHHHHHHHHHHHHHHHHh----CCCC
Confidence            9      5566666554       58999999875531           23356788999999999988753    3446


Q ss_pred             cEEEeccCCCccccccc-CcCC--------------CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          157 CILYTTGTGTTACTEIE-GLCN--------------IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       157 ~ii~is~~~~~~~~~~~-~~~~--------------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      ++|++||.+........ ....              .....|+.||++.+.+++.++.+   .|++++++.|+
T Consensus       208 ~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ivRpg  277 (478)
T 4dqv_A          208 PFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDL---CALPVAVFRCG  277 (478)
T ss_dssp             CEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHH---HCCCEEEEEEC
T ss_pred             eEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHH---hCCCeEEEECc
Confidence            89999975432211100 0000              00134999999999999998876   48899999984

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.73  E-value=5.4e-17  Score=135.72  Aligned_cols=173  Identities=14%  Similarity=0.048  Sum_probs=129.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+++||||+|+||++++++|+++  |++|++++|+.+...++..    .++.++.+|++|+++++++++       ++|+
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~~d~   69 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD----QGVEVRHGDYNQPESLQKAFA-------GVSK   69 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh----cCCeEEEeccCCHHHHHHHHh-------cCCE
Confidence            46999999999999999999998  9999999998776554432    367889999999998877765       6899


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +||+|+...          . +      ++|+.++.++++++.+    .+.+++|++||.+..     ..+     ..|+
T Consensus        70 vi~~a~~~~----------~-~------~~n~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-----~~~-----~~y~  118 (287)
T 2jl1_A           70 LLFISGPHY----------D-N------TLLIVQHANVVKAARD----AGVKHIAYTGYAFAE-----ESI-----IPLA  118 (287)
T ss_dssp             EEECCCCCS----------C-H------HHHHHHHHHHHHHHHH----TTCSEEEEEEETTGG-----GCC-----STHH
T ss_pred             EEEcCCCCc----------C-c------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-----CCC-----CchH
Confidence            999876311          1 1      5688888888888754    345689999965432     111     3599


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhhccCC
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .+|.+.+.+.+.       .|++++.+.| +.+.++                        ++  ++|++.++..+  +.+
T Consensus       119 ~~K~~~E~~~~~-------~~~~~~ilrp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--~~~  188 (287)
T 2jl1_A          119 HVHLATEYAIRT-------TNIPYTFLRN-ALYTDFFVNEGLRASTESGAIVTNAGSGIVNSVTRNELALAAATV--LTE  188 (287)
T ss_dssp             HHHHHHHHHHHH-------TTCCEEEEEE-CCBHHHHSSGGGHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHH--HTS
T ss_pred             HHHHHHHHHHHH-------cCCCeEEEEC-CEeccccchhhHHHHhhCCceeccCCCCccCccCHHHHHHHHHHH--hcC
Confidence            999999988752       6889999998 433221                        11  78899988887  443


Q ss_pred             CCCeeeceeEEecCC
Q 025252          239 DTSYVGKQNLLVNGG  253 (255)
Q Consensus       239 ~~~~~~G~~i~~dgG  253 (255)
                      ..  .+|+.+.+.||
T Consensus       189 ~~--~~g~~~~i~~~  201 (287)
T 2jl1_A          189 EG--HENKTYNLVSN  201 (287)
T ss_dssp             SS--CTTEEEEECCS
T ss_pred             CC--CCCcEEEecCC
Confidence            22  46889999887

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.71  E-value=1.9e-16  Score=132.19  Aligned_cols=170  Identities=15%  Similarity=0.075  Sum_probs=123.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           28 VAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +++||||+|+||++++++|+++  |++|++++|+++...++..    .++.++.+|++|+++++++++       ++|++
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~~~~~~~~-------~~d~v   69 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA----QGITVRQADYGDEAALTSALQ-------GVEKL   69 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH----TTCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc----CCCeEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            3899999999999999999998  9999999998776554433    367889999999998877654       68999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGV  185 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~a  185 (255)
                      ||+|+...                   ..|+.++.++++++.+    .+.+++|++||.+..     ..+     ..|+.
T Consensus        70 i~~a~~~~-------------------~~~~~~~~~l~~a~~~----~~~~~~v~~Ss~~~~-----~~~-----~~y~~  116 (286)
T 2zcu_A           70 LLISSSEV-------------------GQRAPQHRNVINAAKA----AGVKFIAYTSLLHAD-----TSP-----LGLAD  116 (286)
T ss_dssp             EECC---------------------------CHHHHHHHHHHH----HTCCEEEEEEETTTT-----TCC-----STTHH
T ss_pred             EEeCCCCc-------------------hHHHHHHHHHHHHHHH----cCCCEEEEECCCCCC-----CCc-----chhHH
Confidence            99876310                   0256666666666643    345789999965442     111     45999


Q ss_pred             chHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          186 SKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       186 sKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      +|.+.+.+.+.       .|++++.+.| +.+.++                       ++  ++|++.++..+  +.+..
T Consensus       117 sK~~~e~~~~~-------~~~~~~ilrp-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--~~~~~  186 (286)
T 2zcu_A          117 EHIETEKMLAD-------SGIVYTLLRN-GWYSENYLASAPAALEHGVFIGAAGDGKIASATRADYAAAAARV--ISEAG  186 (286)
T ss_dssp             HHHHHHHHHHH-------HCSEEEEEEE-CCBHHHHHTTHHHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHH--HHSSS
T ss_pred             HHHHHHHHHHH-------cCCCeEEEeC-hHHhhhhHHHhHHhhcCCceeccCCCCccccccHHHHHHHHHHH--hcCCC
Confidence            99999988753       5899999999 443322                       11  78999999888  44332


Q ss_pred             CeeeceeEEecCC
Q 025252          241 SYVGKQNLLVNGG  253 (255)
Q Consensus       241 ~~~~G~~i~~dgG  253 (255)
                        .+|+.+.++||
T Consensus       187 --~~g~~~~i~~~  197 (286)
T 2zcu_A          187 --HEGKVYELAGD  197 (286)
T ss_dssp             --CTTCEEEECCS
T ss_pred             --CCCceEEEeCC
Confidence              37899999887

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.68  E-value=1.4e-16  Score=134.16  Aligned_cols=184  Identities=14%  Similarity=0.065  Sum_probs=121.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +|+++||||+|+||++++++|+++| ++|++++|+++....  ..+...++.++.+|++|+++++++++       ++|+
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~~~~~~~~D~~d~~~l~~~~~-------~~d~   75 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQGAEVVQGDQDDQVIMELALN-------GAYA   75 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHTTCEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHCCCEEEEecCCCHHHHHHHHh-------cCCE
Confidence            5789999999999999999999999 999999998765421  11111468889999999998887765       6899


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      +||+++....        .       ..+.|+.++..++++    +++.+.++||++|+.+...  ....   .+...|.
T Consensus        76 vi~~a~~~~~--------~-------~~~~~~~~~~~~~~a----a~~~gv~~iv~~S~~~~~~--~~~~---~~~~~y~  131 (299)
T 2wm3_A           76 TFIVTNYWES--------C-------SQEQEVKQGKLLADL----ARRLGLHYVVYSGLENIKK--LTAG---RLAAAHF  131 (299)
T ss_dssp             EEECCCHHHH--------T-------CHHHHHHHHHHHHHH----HHHHTCSEEEECCCCCHHH--HTTT---SCCCHHH
T ss_pred             EEEeCCCCcc--------c-------cchHHHHHHHHHHHH----HHHcCCCEEEEEcCccccc--cCCC---cccCchh
Confidence            9998753210        0       122344454444444    4444567899977433221  1111   1225699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh------------h--------------Hh--HHhhhhhhhhhhcc
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM------------A--------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t------------~--------------~~--~~~~~~~~~~l~~~  236 (255)
                      .+|.+++.+.+.       .|++++.+.|+.....            .              ++  ++|++.++..+  +
T Consensus       132 ~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--l  202 (299)
T 2wm3_A          132 DGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSL--L  202 (299)
T ss_dssp             HHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHH--H
T ss_pred             hHHHHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHH--H
Confidence            999999988753       4889999998432111            0              11  67888888777  3


Q ss_pred             CCCCCeeeceeEEecC
Q 025252          237 DDDTSYVGKQNLLVNG  252 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dg  252 (255)
                      .+.. ...|+++.++|
T Consensus       203 ~~~~-~~~g~~~~~~g  217 (299)
T 2wm3_A          203 KMPE-KYVGQNIGLST  217 (299)
T ss_dssp             HSHH-HHTTCEEECCS
T ss_pred             cChh-hhCCeEEEeee
Confidence            3321 12567777764

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.68  E-value=5.1e-17  Score=137.18  Aligned_cols=158  Identities=14%  Similarity=0.062  Sum_probs=113.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .|++|+++||||+|+||++++++|+++|+      +...         ....+..+.+|++|+++++++++..     ++
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~---------~~~~~~~~~~D~~d~~~~~~~~~~~-----~~   62 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE---------DWVFVSSKDADLTDTAQTRALFEKV-----QP   62 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC---------EEEECCTTTCCTTSHHHHHHHHHHS-----CC
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc---------cccccCceecccCCHHHHHHHHhhc-----CC
Confidence            46788999999999999999999999997      1110         0023444578999999998888753     69


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCc---
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGL---  175 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~---  175 (255)
                      |++||+|+..+.      ...+.++.+..+++|+.++.++++++.+.    +.+++|++||.+.......    ...   
T Consensus        63 d~Vih~A~~~~~------~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~v~~SS~~vyg~~~~~~~~E~~~~~  132 (319)
T 4b8w_A           63 THVIHLAAMVGG------LFRNIKYNLDFWRKNVHMNDNVLHSAFEV----GARKVVSCLSTCIFPDKTTYPIDETMIHN  132 (319)
T ss_dssp             SEEEECCCCCCC------HHHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEECCGGGSCSSCCSSBCGGGGGB
T ss_pred             CEEEECceeccc------ccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCeEEEEcchhhcCCCCCCCcccccccc
Confidence            999999775321      01133456778999999999999988643    4468999997654322110    000   


Q ss_pred             -CCCCCc-ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 -CNIPAN-YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 -~~~~~~-~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       ...|.. .|+.+|.+.+.+++.++++   .|+++..+.|
T Consensus       133 ~~~~p~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp  169 (319)
T 4b8w_A          133 GPPHNSNFGYSYAKRMIDVQNRAYFQQ---YGCTFTAVIP  169 (319)
T ss_dssp             SCCCSSSHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHh---hCCCEEEEee
Confidence             122323 5999999999999999887   4788888877

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.67  E-value=6.5e-16  Score=133.35  Aligned_cols=144  Identities=16%  Similarity=0.085  Sum_probs=102.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH--HHHHHHhCCCceEEEEee-CCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCD-VSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g  100 (255)
                      +.+|+++||||+|+||++++++|+++|++|++++|+.+..  +++.   ...++.++.+| ++|+++++++++       
T Consensus         3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~~-------   72 (352)
T 1xgk_A            3 QQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLFE-------   72 (352)
T ss_dssp             CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHHT-------
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHHh-------
Confidence            3467899999999999999999999999999999987654  2222   12368889999 999999887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||++...                  .+.|..+ .++++++    ++.+ .+++|++||.+..   ....   .+
T Consensus        73 ~~d~Vi~~a~~~~------------------~~~~~~~-~~l~~aa----~~~g~v~~~V~~SS~~~~---~~~~---~~  123 (352)
T 1xgk_A           73 GAHLAFINTTSQA------------------GDEIAIG-KDLADAA----KRAGTIQHYIYSSMPDHS---LYGP---WP  123 (352)
T ss_dssp             TCSEEEECCCSTT------------------SCHHHHH-HHHHHHH----HHHSCCSEEEEEECCCGG---GTSS---CC
T ss_pred             cCCEEEEcCCCCC------------------cHHHHHH-HHHHHHH----HHcCCccEEEEeCCcccc---ccCC---CC
Confidence            6899999864221                  0124443 4444444    3344 5789999965421   1111   22


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...|+.||++.+.+++.       .|++++++.|
T Consensus       124 ~~~y~~sK~~~E~~~~~-------~gi~~~ivrp  150 (352)
T 1xgk_A          124 AVPMWAPKFTVENYVRQ-------LGLPSTFVYA  150 (352)
T ss_dssp             CCTTTHHHHHHHHHHHT-------SSSCEEEEEE
T ss_pred             CccHHHHHHHHHHHHHH-------cCCCEEEEec
Confidence            25699999999988765       2788888877

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.66  E-value=1.3e-15  Score=127.31  Aligned_cols=175  Identities=8%  Similarity=-0.028  Sum_probs=122.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .++++|||+ |+||++++++|+++|++|++++|++.....+..    .++.++.+|++|.+            ..++|++
T Consensus         5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A            5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----CCCeEEEecccccc------------cCCCCEE
Confidence            367999998 999999999999999999999999877655543    46889999999832            3589999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC--CCCCcEEEeccCCCccccc----ccCcCCCC
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP--RRRGCILYTTGTGTTACTE----IEGLCNIP  179 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~~~ii~is~~~~~~~~~----~~~~~~~~  179 (255)
                      ||+|+.....          +..              .+.++..+++  .+.+++|++||.+......    .......|
T Consensus        68 i~~a~~~~~~----------~~~--------------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p  123 (286)
T 3ius_A           68 LISTAPDSGG----------DPV--------------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTP  123 (286)
T ss_dssp             EECCCCBTTB----------CHH--------------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred             EECCCccccc----------cHH--------------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence            9987644311          010              1233333333  3457899999765433211    11223345


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~  234 (255)
                      .+.|+.+|.+.+.+.+.+      .|++++++.| +.+..+                       ++  .+|++.++..+ 
T Consensus       124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~-  195 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV------PNLPLHVFRL-AGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAAS-  195 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS------TTCCEEEEEE-CEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHH-
T ss_pred             CCHHHHHHHHHHHHHHhh------cCCCEEEEec-cceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHH-
Confidence            577999999999887766      6889999988 433222                       11  79999999988 


Q ss_pred             ccCCCCCeeeceeEEecCC
Q 025252          235 AKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG  253 (255)
                       +....   .|+.+.+.+|
T Consensus       196 -~~~~~---~g~~~~i~~~  210 (286)
T 3ius_A          196 -MARPD---PGAVYNVCDD  210 (286)
T ss_dssp             -HHSCC---TTCEEEECCS
T ss_pred             -HhCCC---CCCEEEEeCC
Confidence             44333   5788888766

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.65  E-value=1.1e-15  Score=127.96  Aligned_cols=171  Identities=13%  Similarity=0.053  Sum_probs=117.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++||||+|+||++++++|.+. |++|++++|+++...++    ...++.++.+|++|+++++++++       ++|++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~----~~~~v~~~~~D~~d~~~l~~~~~-------~~d~vi   70 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD----WRGKVSVRQLDYFNQESMVEAFK-------GMDTVV   70 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG----GBTTBEEEECCTTCHHHHHHHTT-------TCSEEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh----hhCCCEEEEcCCCCHHHHHHHHh-------CCCEEE
Confidence            5999999999999999999998 99999999997754332    22578999999999998877765       789999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVS  186 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~as  186 (255)
                      |+|+...          ..       ..|+.++..+++++    ++.+.++||++||.+..        ..   ..|..+
T Consensus        71 ~~a~~~~----------~~-------~~~~~~~~~l~~aa----~~~gv~~iv~~Ss~~~~--------~~---~~~~~~  118 (289)
T 3e48_A           71 FIPSIIH----------PS-------FKRIPEVENLVYAA----KQSGVAHIIFIGYYADQ--------HN---NPFHMS  118 (289)
T ss_dssp             ECCCCCC----------SH-------HHHHHHHHHHHHHH----HHTTCCEEEEEEESCCS--------TT---CCSTTH
T ss_pred             EeCCCCc----------cc-------hhhHHHHHHHHHHH----HHcCCCEEEEEcccCCC--------CC---CCCccc
Confidence            9876432          11       12455554444444    44556789999964321        11   224444


Q ss_pred             hHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhhhhhccCCCCC
Q 025252          187 KFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       187 Kaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~~l~~~~~~~~  241 (255)
                      +..     ..+...++..|++++.+.| +.+.++                       ++  ++|++.++..+  +.+...
T Consensus       119 ~~~-----~~~e~~~~~~g~~~~ilrp-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~--l~~~~~  190 (289)
T 3e48_A          119 PYF-----GYASRLLSTSGIDYTYVRM-AMYMDPLKPYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAI--IKNPDT  190 (289)
T ss_dssp             HHH-----HHHHHHHHHHCCEEEEEEE-CEESTTHHHHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHH--HHCGGG
T ss_pred             hhH-----HHHHHHHHHcCCCEEEEec-cccccccHHHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHH--HcCCCc
Confidence            432     1333444557999999999 544332                       12  89999999988  444433


Q ss_pred             eeeceeEEec
Q 025252          242 YVGKQNLLVN  251 (255)
Q Consensus       242 ~~~G~~i~~d  251 (255)
                      +  |+++.++
T Consensus       191 ~--g~~~~~~  198 (289)
T 3e48_A          191 W--GKRYLLS  198 (289)
T ss_dssp             T--TCEEEEC
T ss_pred             C--CceEEeC
Confidence            2  8888887

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.61  E-value=3.3e-15  Score=125.99  Aligned_cols=177  Identities=11%  Similarity=0.111  Sum_probs=113.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-------chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-------NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+.       +..+.+ ..+...++.++.+|++|++++.++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHHh-----
Confidence            46799999999999999999999999999999986       333322 22222468899999999998877765     


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                        ++|++||+++...                      +.+..++++++.    +.+ -+++|. |+.+... .  .....
T Consensus        76 --~~d~vi~~a~~~~----------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~-~--~~~~~  123 (307)
T 2gas_A           76 --QVDIVICAAGRLL----------------------IEDQVKIIKAIK----EAGNVKKFFP-SEFGLDV-D--RHDAV  123 (307)
T ss_dssp             --TCSEEEECSSSSC----------------------GGGHHHHHHHHH----HHCCCSEEEC-SCCSSCT-T--SCCCC
T ss_pred             --CCCEEEECCcccc----------------------cccHHHHHHHHH----hcCCceEEee-cccccCc-c--cccCC
Confidence              6899999875321                      234445555553    333 456763 3222111 0  00111


Q ss_pred             CC-CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh-------------h--------------Hh--HHhhh
Q 025252          178 IP-ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM-------------A--------------EA--IASIA  227 (255)
Q Consensus       178 ~~-~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t-------------~--------------~~--~~~~~  227 (255)
                      .| ...| .+|++++.+.+.       .|++++.+.|+.....             .              ++  ++|++
T Consensus       124 ~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva  195 (307)
T 2gas_A          124 EPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVG  195 (307)
T ss_dssp             TTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHH
T ss_pred             CcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHH
Confidence            12 2468 999999887652       4788888888322110             0              11  78999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecC
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                      ..+..+  +.+..  ..|+.+.+.|
T Consensus       196 ~~~~~~--l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          196 TFTIRA--ANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHH--HTCGG--GTTEEEECCC
T ss_pred             HHHHHH--HcCcc--ccCceEEEeC
Confidence            988888  44332  2356666643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.59  E-value=1.3e-14  Score=124.60  Aligned_cols=148  Identities=14%  Similarity=0.082  Sum_probs=105.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |..++++||||||+||++++++|++.|++|++++|+..    ..+ ..+.+...++.++.+|++|.+++.+++++.    
T Consensus         8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A            8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALEDKGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHHTTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHhCCcEEEEeecCCHHHHHHHHhhC----
Confidence            45678999999999999999999999999999999872    222 122233357999999999999998888753    


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       ++|++||+++.                      .|+.++.++++++...    + -.++++ |+.+.   .........
T Consensus        83 -~~d~Vi~~a~~----------------------~n~~~~~~l~~aa~~~----g~v~~~v~-S~~g~---~~~e~~~~~  131 (346)
T 3i6i_A           83 -EIDIVVSTVGG----------------------ESILDQIALVKAMKAV----GTIKRFLP-SEFGH---DVNRADPVE  131 (346)
T ss_dssp             -TCCEEEECCCG----------------------GGGGGHHHHHHHHHHH----CCCSEEEC-SCCSS---CTTTCCCCT
T ss_pred             -CCCEEEECCch----------------------hhHHHHHHHHHHHHHc----CCceEEee-cccCC---CCCccCcCC
Confidence             79999998653                      1777888888887653    3 456665 42221   111111223


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                      |...|+.+|.+.+.+.+.       .|++++.+.||
T Consensus       132 p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg  160 (346)
T 3i6i_A          132 PGLNMYREKRRVRQLVEE-------SGIPFTYICCN  160 (346)
T ss_dssp             THHHHHHHHHHHHHHHHH-------TTCCBEEEECC
T ss_pred             CcchHHHHHHHHHHHHHH-------cCCCEEEEEec
Confidence            446799999998877654       57888888873

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.59  E-value=5.3e-15  Score=128.19  Aligned_cols=128  Identities=20%  Similarity=0.141  Sum_probs=99.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++++||||+|+||++++++|+++|+ +|+..+|+                       +|+++++++++       ++|++
T Consensus         1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-----------------------~d~~~l~~~~~-------~~d~V   50 (369)
T 3st7_A            1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-----------------------TKEEELESALL-------KADFI   50 (369)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-----------------------CCHHHHHHHHH-------HCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-----------------------CCHHHHHHHhc-------cCCEE
Confidence            3699999999999999999999998 77776664                       66788877776       48999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCC-CcEEEeccCCCcccccccCcCCCCCcccc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRR-GCILYTTGTGTTACTEIEGLCNIPANYYG  184 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~-~~ii~is~~~~~~~~~~~~~~~~~~~~Y~  184 (255)
                      ||+|+....           +..+..+++|+.++.++++++.    +.+. .+++++||.....           .+.|+
T Consensus        51 ih~a~~~~~-----------~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~v~~Ss~~~~~-----------~~~Y~  104 (369)
T 3st7_A           51 VHLAGVNRP-----------EHDKEFSLGNVSYLDHVLDILT----RNTKKPAILLSSSIQATQ-----------DNPYG  104 (369)
T ss_dssp             EECCCSBCT-----------TCSTTCSSSCCBHHHHHHHHHT----TCSSCCEEEEEEEGGGGS-----------CSHHH
T ss_pred             EECCcCCCC-----------CCHHHHHHHHHHHHHHHHHHHH----HhCCCCeEEEeCchhhcC-----------CCCch
Confidence            999765431           2334577889999988888874    3333 3899999654322           25699


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+|.+.+.+.+.++++   .|+++..+.|
T Consensus       105 ~sK~~~E~~~~~~~~~---~g~~~~i~R~  130 (369)
T 3st7_A          105 ESKLQGEQLLREYAEE---YGNTVYIYRW  130 (369)
T ss_dssp             HHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHHHH---hCCCEEEEEC
Confidence            9999999999999887   4677888877

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.57  E-value=4.7e-15  Score=125.93  Aligned_cols=178  Identities=13%  Similarity=0.033  Sum_probs=111.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-c----hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-N----LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .|+++||||+|+||++++++|+++|++|++++|+. .    ...+....+...++.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHc-------
Confidence            35699999999999999999999999999999986 2    11121222222468899999999998887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||+++...                      +.++.++++++.    +.+ -+++|. |+.+... .  ......|
T Consensus        77 ~~d~vi~~a~~~~----------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~-~--~~~~~~p  126 (321)
T 3c1o_A           77 QVDIVISALPFPM----------------------ISSQIHIINAIK----AAGNIKRFLP-SDFGCEE-D--RIKPLPP  126 (321)
T ss_dssp             TCSEEEECCCGGG----------------------SGGGHHHHHHHH----HHCCCCEEEC-SCCSSCG-G--GCCCCHH
T ss_pred             CCCEEEECCCccc----------------------hhhHHHHHHHHH----HhCCccEEec-cccccCc-c--ccccCCC
Confidence            6899999875321                      233444455443    333 456763 3222111 0  0000111


Q ss_pred             -CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhh---------------h------------Hh--HHhhhhh
Q 025252          180 -ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAM---------------A------------EA--IASIANA  229 (255)
Q Consensus       180 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t---------------~------------~~--~~~~~~~  229 (255)
                       ...| .+|++++.+.+.       .+++++.+.|+.....               .            ++  ++|++.+
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~  198 (321)
T 3c1o_A          127 FESVL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKY  198 (321)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHH
T ss_pred             cchHH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHH
Confidence             2469 999999987752       3667777777322110               0            11  8899998


Q ss_pred             hhhhhccCCCCCeeeceeEEecC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                      +..+  +.+..  ..|+.+.+.|
T Consensus       199 ~~~~--l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          199 TIKV--ACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHH--HHCGG--GTTEEEECCC
T ss_pred             HHHH--HhCcc--ccCeEEEEeC
Confidence            8888  43332  2366666654

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.56  E-value=1e-14  Score=123.80  Aligned_cols=176  Identities=13%  Similarity=0.099  Sum_probs=110.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |+++||||+|+||++++++|+++|++|++++|+.+...+..+++...++.++.+|++|++++.++++       ++|++|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~-------~~d~vi   84 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMK-------KVDVVI   84 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHT-------TCSEEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHc-------CCCEEE
Confidence            5799999999999999999999999999999987522222222222468899999999998887765       689999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC-Ccccc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP-ANYYG  184 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~-~~~Y~  184 (255)
                      |+++...                      +.+..++++++.    +.+ .+++|+ |+.+... .  ......| ...| 
T Consensus        85 ~~a~~~~----------------------~~~~~~l~~aa~----~~g~v~~~v~-S~~g~~~-~--~~~~~~p~~~~y-  133 (318)
T 2r6j_A           85 SALAFPQ----------------------ILDQFKILEAIK----VAGNIKRFLP-SDFGVEE-D--RINALPPFEALI-  133 (318)
T ss_dssp             ECCCGGG----------------------STTHHHHHHHHH----HHCCCCEEEC-SCCSSCT-T--TCCCCHHHHHHH-
T ss_pred             ECCchhh----------------------hHHHHHHHHHHH----hcCCCCEEEe-eccccCc-c--cccCCCCcchhH-
Confidence            9865321                      223344445443    333 456764 4222111 0  0000111 1458 


Q ss_pred             cchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhhhhhhhccCC
Q 025252          185 VSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANAALYNMAKDD  238 (255)
Q Consensus       185 asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~~~~l~~~~~  238 (255)
                      .+|.+++.+.+.       .|++++.+.|+...+..                        ++  ++|++..+..+  +.+
T Consensus       134 ~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~--l~~  204 (318)
T 2r6j_A          134 ERKRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKV--ATD  204 (318)
T ss_dssp             HHHHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHH--TTC
T ss_pred             HHHHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHH--hcC
Confidence            999998877653       46777777773322110                        11  78999998888  443


Q ss_pred             CCCeeeceeEEec
Q 025252          239 DTSYVGKQNLLVN  251 (255)
Q Consensus       239 ~~~~~~G~~i~~d  251 (255)
                      ..  ..|+.+.+.
T Consensus       205 ~~--~~~~~~~~~  215 (318)
T 2r6j_A          205 PR--ALNRVVIYR  215 (318)
T ss_dssp             GG--GTTEEEECC
T ss_pred             cc--ccCeEEEec
Confidence            32  125555554

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.56  E-value=2.3e-14  Score=120.89  Aligned_cols=144  Identities=13%  Similarity=0.152  Sum_probs=94.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-----HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-----QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .|+++||||+|+||++++++|+++|++|++++|+....     .+....+...++.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-------
Confidence            46799999999999999999999999999999985321     111222333578899999999999888776       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||+++...                      +.+...+++++..    .+ -+++|+ |+.+...   .......|
T Consensus        77 ~~d~vi~~a~~~~----------------------~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~---~~~~~~~p  126 (308)
T 1qyc_A           77 NVDVVISTVGSLQ----------------------IESQVNIIKAIKE----VGTVKRFFP-SEFGNDV---DNVHAVEP  126 (308)
T ss_dssp             TCSEEEECCCGGG----------------------SGGGHHHHHHHHH----HCCCSEEEC-SCCSSCT---TSCCCCTT
T ss_pred             CCCEEEECCcchh----------------------hhhHHHHHHHHHh----cCCCceEee-cccccCc---cccccCCc
Confidence            6899999875321                      2233445555543    33 456764 4322111   10111112


Q ss_pred             -CcccccchHHHHHHHHHHHHHhcccCcEEeEeccC
Q 025252          180 -ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHT  214 (255)
Q Consensus       180 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~  214 (255)
                       ...| .+|.+++.+.+.       .|++++.+.|+
T Consensus       127 ~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~  154 (308)
T 1qyc_A          127 AKSVF-EVKAKVRRAIEA-------EGIPYTYVSSN  154 (308)
T ss_dssp             HHHHH-HHHHHHHHHHHH-------HTCCBEEEECC
T ss_pred             chhHH-HHHHHHHHHHHh-------cCCCeEEEEec
Confidence             2458 999998887653       36777777773

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.54  E-value=5.5e-14  Score=127.19  Aligned_cols=157  Identities=12%  Similarity=0.044  Sum_probs=109.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|+++||||+|+||++++++|+++|++|++++|+.....            .+.+|+.+..         .+.+.++|++
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~------------~v~~d~~~~~---------~~~l~~~D~V  205 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG------------KRFWDPLNPA---------SDLLDGADVL  205 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT------------CEECCTTSCC---------TTTTTTCSEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc------------ceeecccchh---------HHhcCCCCEE
Confidence            678999999999999999999999999999999876421            2567776431         1223589999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcc-cc---cccCcCCCCCc
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA-CT---EIEGLCNIPAN  181 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~-~~---~~~~~~~~~~~  181 (255)
                      ||+|+....      ...+.+..+..+++|+.++.++++++..   +.+.+++|++||.+.+. ..   ........|..
T Consensus       206 ih~A~~~~~------~~~~~~~~~~~~~~Nv~gt~~ll~a~a~---~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~  276 (516)
T 3oh8_A          206 VHLAGEPIF------GRFNDSHKEAIRESRVLPTKFLAELVAE---STQCTTMISASAVGFYGHDRGDEILTEESESGDD  276 (516)
T ss_dssp             EECCCC-----------CCGGGHHHHHHHTHHHHHHHHHHHHH---CSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSS
T ss_pred             EECCCCccc------cccchhHHHHHHHHHHHHHHHHHHHHHh---cCCCCEEEEeCcceEecCCCCCCccCCCCCCCcC
Confidence            999765431      1335667888999999999999997542   34557899999766543 11   11111112446


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcch
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL  217 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~  217 (255)
                      .|+.+|...+.+.+    +....|++++++.| +.+
T Consensus       277 ~y~~~~~~~E~~~~----~~~~~gi~~~ilRp-~~v  307 (516)
T 3oh8_A          277 FLAEVCRDWEHATA----PASDAGKRVAFIRT-GVA  307 (516)
T ss_dssp             HHHHHHHHHHHTTH----HHHHTTCEEEEEEE-CEE
T ss_pred             hHHHHHHHHHHHHH----HHHhCCCCEEEEEe-eEE
Confidence            68888877766543    33457999999999 444

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.54  E-value=4.4e-14  Score=121.77  Aligned_cols=159  Identities=15%  Similarity=0.108  Sum_probs=107.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcC-----CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNG-----AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g-----~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +|+++||||+|+||++++++|+++|     ++|++++|+.....     ....++.++.+|++|+++++++++..    +
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~~~----~   71 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-----HEDNPINYVQCDISDPDDSQAKLSPL----T   71 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-----CCSSCCEEEECCTTSHHHHHHHHTTC----T
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-----cccCceEEEEeecCCHHHHHHHHhcC----C
Confidence            4789999999999999999999999     99999999866432     12347889999999999887776532    2


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEE-------EeccCCCccccc--
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCIL-------YTTGTGTTACTE--  171 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii-------~is~~~~~~~~~--  171 (255)
                      ++|++||+|+...            ++.+..+++|+.++.++++++.+..  .+-.+++       ++||.+......  
T Consensus        72 ~~d~vih~a~~~~------------~~~~~~~~~n~~~~~~l~~a~~~~~--~~~~~~v~~~g~~i~~Ss~~vyg~~~~~  137 (364)
T 2v6g_A           72 DVTHVFYVTWANR------------STEQENCEANSKMFRNVLDAVIPNC--PNLKHISLQTGRKHYMGPFESYGKIESH  137 (364)
T ss_dssp             TCCEEEECCCCCC------------SSHHHHHHHHHHHHHHHHHHHTTTC--TTCCEEEEECCTHHHHCCGGGTTTSCCC
T ss_pred             CCCEEEECCCCCc------------chHHHHHHHhHHHHHHHHHHHHHhc--cccceEEeccCceEEEechhhccccccC
Confidence            3999999876431            2456788999999999999887542  1234555       677554332210  


Q ss_pred             -c---cCcCCCC-CcccccchHHHHHHHHHHHHHhcccC-cEEeEeccC
Q 025252          172 -I---EGLCNIP-ANYYGVSKFGILGLVKSLAAELGRYG-IRVDCVSHT  214 (255)
Q Consensus       172 -~---~~~~~~~-~~~Y~asKaa~~~~~~~la~e~~~~g-i~v~~v~p~  214 (255)
                       .   ......| ...|    .+.+.+.+.++.   .++ +++.++.|+
T Consensus       138 ~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~  179 (364)
T 2v6g_A          138 DPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPG  179 (364)
T ss_dssp             CSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEES
T ss_pred             CCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCC
Confidence             0   1101111 2346    234444444432   255 899998873

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.51  E-value=2.1e-13  Score=115.15  Aligned_cols=147  Identities=12%  Similarity=0.113  Sum_probs=99.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-----hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-----LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .|+++||||+|+||++++++|+++|++|++++|+..     ..+.+ ..+...++.++.+|++|++++.++++       
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~~~~~~~~~D~~d~~~l~~~~~-------   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFKQLGAKLIEASLDDHQRLVDALK-------   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHHTTTCEEECCCSSCHHHHHHHHT-------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHHhCCeEEEeCCCCCHHHHHHHHh-------
Confidence            467999999999999999999999999999999853     22222 22223578899999999998887765       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++||+++....                  ..|+.++.++++++..    .+ -+++|+ |+.+... ... .....|
T Consensus        76 ~~d~vi~~a~~~~~------------------~~~~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~-~~~-~~~~~p  130 (313)
T 1qyd_A           76 QVDVVISALAGGVL------------------SHHILEQLKLVEAIKE----AGNIKRFLP-SEFGMDP-DIM-EHALQP  130 (313)
T ss_dssp             TCSEEEECCCCSSS------------------STTTTTHHHHHHHHHH----SCCCSEEEC-SCCSSCT-TSC-CCCCSS
T ss_pred             CCCEEEECCccccc------------------hhhHHHHHHHHHHHHh----cCCCceEEe-cCCcCCc-ccc-ccCCCC
Confidence            68999998764321                  0256666666666643    34 467775 4222111 110 011112


Q ss_pred             -CcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          180 -ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       180 -~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                       ...| .+|.+.+.+.+       ..|++++.+.|
T Consensus       131 ~~~~y-~sK~~~e~~~~-------~~g~~~~ilrp  157 (313)
T 1qyd_A          131 GSITF-IDKRKVRRAIE-------AASIPYTYVSS  157 (313)
T ss_dssp             TTHHH-HHHHHHHHHHH-------HTTCCBCEEEC
T ss_pred             CcchH-HHHHHHHHHHH-------hcCCCeEEEEe
Confidence             2468 99999888764       24677777777

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.35  E-value=1.9e-13  Score=114.57  Aligned_cols=110  Identities=18%  Similarity=0.222  Sum_probs=82.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|+++||||+||+|+++++.|+++|++|++++|+.++.+++.+++.. .++.++.+|++++++++++++       
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHH-------
Confidence            357899999999999999999999999999999999998877776665532 246678899999998776655       


Q ss_pred             CccEEEEcCCCccccCccCCCCCCh-HHHHHHHhhhhhhHH
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPK-SDLERLLAVNTIGGF  140 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  140 (255)
                      .+|++|||++.....  .+..+.+. ++++.++++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~--~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLEL--LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCS--BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccC--CChhHcCchHHHHHHHHhhhhhhH
Confidence            589999997643211  11212222 555667888888765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.28  E-value=1.1e-10  Score=97.93  Aligned_cols=153  Identities=18%  Similarity=0.152  Sum_probs=93.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++|+||||||.||++++++|.++|++|+++.|++...          .   +..|     .+.      .+...++|.+|
T Consensus         1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~----------~---~~~~-----~~~------~~~l~~~d~vi   56 (298)
T 4b4o_A            1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG----------R---ITWD-----ELA------ASGLPSCDAAV   56 (298)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT----------E---EEHH-----HHH------HHCCCSCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC----------e---eecc-----hhh------HhhccCCCEEE
Confidence            3599999999999999999999999999999976431          1   1111     110      12235799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~~~~~~~~  182 (255)
                      |.|+....   ......+....+..++.|+.++-++.+.+...  ..+..++++.||.+.......    ...+..|...
T Consensus        57 hla~~~i~---~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~  131 (298)
T 4b4o_A           57 NLAGENIL---NPLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF  131 (298)
T ss_dssp             ECCCCCSS---CTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred             EeccCccc---chhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCCceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence            98753211   12223466777788899999988888776542  233455677776544332111    1111122233


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |+..|...+.     +......++++..+.|
T Consensus       132 ~~~~~~~~e~-----~~~~~~~~~~~~~~r~  157 (298)
T 4b4o_A          132 FSNLVTKWEA-----AARLPGDSTRQVVVRS  157 (298)
T ss_dssp             HHHHHHHHHH-----HHCCSSSSSEEEEEEE
T ss_pred             hHHHHHHHHH-----HHHhhccCCceeeeee
Confidence            4444433332     2334567888888887

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.21  E-value=1.9e-11  Score=104.33  Aligned_cols=156  Identities=13%  Similarity=0.075  Sum_probs=98.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++++||||+|+||..++..|+++|+       +|+++++++.  ........+.+..+.++ .|+++.+++.+++     
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~-----   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAF-----   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHh-----
Confidence            4699999999999999999999886       8999998752  22221222221112222 4666544444333     


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-cccCc-
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-EIEGL-  175 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-~~~~~-  175 (255)
                        .+.|++||.|+.....      ..   .....+++|+.++..+++++.++-  ..+.+++++|+....... ..... 
T Consensus        79 --~~~D~Vih~Ag~~~~~------~~---~~~~~~~~Nv~~t~~l~~a~~~~~--~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 --KDADYALLVGAAPRKA------GM---ERRDLLQVNGKIFTEQGRALAEVA--KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             --TTCSEEEECCCCCCCT------TC---CHHHHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             --CCCCEEEECCCcCCCC------CC---CHHHHHHHHHHHHHHHHHHHHhhc--CCCeEEEEeCCchhhhHHHHHHHcC
Confidence              2689999988754311      12   234578999999999999887641  134577777743210000 00111 


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAEL  201 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~  201 (255)
                      +..|...|+.+|...+.+...+++.+
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~  171 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKT  171 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             CCChhheeccchHHHHHHHHHHHHHh
Confidence            23345679999999999888888764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.03  E-value=7.9e-10  Score=88.63  Aligned_cols=80  Identities=21%  Similarity=0.251  Sum_probs=61.5

Q ss_pred             eecCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH
Q 025252           23 RLQGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        23 ~~~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      +|.||+++||||                ||+||+++|++|+++|++|++++++....      .+ ..+  -.+|+++.+
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~------~~-~g~--~~~dv~~~~   75 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP------TP-PFV--KRVDVMTAL   75 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC------CC-TTE--EEEECCSHH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc------cC-CCC--eEEccCcHH
Confidence            478999999999                68999999999999999999998765321      11 122  346887765


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCccc
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEY  114 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~  114 (255)
                      +   +++.+.+.++++|++||||+...+
T Consensus        76 ~---~~~~v~~~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           76 E---MEAAVNASVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             H---HHHHHHHHGGGCSEEEECCBCCSE
T ss_pred             H---HHHHHHHhcCCCCEEEECCcccCC
Confidence            4   556666778899999999886643

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.88  E-value=1.2e-08  Score=73.16  Aligned_cols=73  Identities=18%  Similarity=0.226  Sum_probs=61.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++|+|+ |++|+++++.|.+.| ++|++++|+++..+.+.    ...+.++.+|+++.++++++++       ++|
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~d   71 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RMGVATKQVDAKDEAGLAKALG-------GFD   71 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TTTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hCCCcEEEecCCCHHHHHHHHc-------CCC
Confidence            4578999999 999999999999999 89999999987766655    2357788999999987776653       789


Q ss_pred             EEEEcC
Q 025252          104 ILVNSG  109 (255)
Q Consensus       104 ~li~~a  109 (255)
                      ++|+++
T Consensus        72 ~vi~~~   77 (118)
T 3ic5_A           72 AVISAA   77 (118)
T ss_dssp             EEEECS
T ss_pred             EEEECC
Confidence            999975

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.85  E-value=2e-09  Score=86.57  Aligned_cols=80  Identities=14%  Similarity=0.265  Sum_probs=58.2

Q ss_pred             cCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHH
Q 025252           25 QGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV   88 (255)
Q Consensus        25 ~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   88 (255)
                      .||+++||||                ||++|.++|++++++|++|++++|+.....     .....+.  ..|+.   +.
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-----~~~~~~~--~~~v~---s~   71 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-----EPHPNLS--IREIT---NT   71 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-----CCCTTEE--EEECC---SH
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cCCCCeE--EEEHh---HH
Confidence            5899999999                788999999999999999999998754211     0011232  23444   45


Q ss_pred             HHHHHHHHHHcCCccEEEEcCCCccc
Q 025252           89 INLVDTTVAKFGKLDILVNSGCNLEY  114 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~~a~~~~~  114 (255)
                      +++++.+.+.++++|++|+||+...+
T Consensus        72 ~em~~~v~~~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           72 KDLLIEMQERVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHHHHHHHHGGGCSEEEECSBCCSE
T ss_pred             HHHHHHHHHhcCCCCEEEEcCccccc
Confidence            55566666777899999999876543

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.71  E-value=5.5e-08  Score=85.15  Aligned_cols=78  Identities=18%  Similarity=0.292  Sum_probs=67.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC---CEEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG---AKVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g---~~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++++|+|+ |++|+++++.|++.|   .+|++++|+.++.+++.+++..   .++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            46899999 899999999999998   4999999999988888777642   35888999999999999998875     


Q ss_pred             CccEEEEcCC
Q 025252          101 KLDILVNSGC  110 (255)
Q Consensus       101 ~id~li~~a~  110 (255)
                      ++|++||+++
T Consensus        76 ~~DvVin~ag   85 (405)
T 4ina_A           76 KPQIVLNIAL   85 (405)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            6999999865

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.65  E-value=6.4e-08  Score=85.82  Aligned_cols=78  Identities=15%  Similarity=0.189  Sum_probs=62.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |++|+++|+| +|++|+++++.|++.|++|++++|+.+..+++.++++  .+..+.+|+++.++++++++       ++|
T Consensus         1 M~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~--~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            1 MATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             -CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCT--TEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcC--CceEEEeecCCHHHHHHHHc-------CCc
Confidence            4578899998 7999999999999999999999999776665554432  46788899999988776654       699


Q ss_pred             EEEEcCCC
Q 025252          104 ILVNSGCN  111 (255)
Q Consensus       104 ~li~~a~~  111 (255)
                      ++||+++.
T Consensus        71 vVIn~a~~   78 (450)
T 1ff9_A           71 LVISLIPY   78 (450)
T ss_dssp             EEEECCC-
T ss_pred             EEEECCcc
Confidence            99998754

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.58  E-value=9.5e-08  Score=72.57  Aligned_cols=91  Identities=24%  Similarity=0.306  Sum_probs=67.4

Q ss_pred             ccCccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH------HHHHHHhCCCceEEEEeeCCCH--H
Q 025252           15 LPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG------QALADKLGHQDVCYIHCDVSNE--R   86 (255)
Q Consensus        15 ~~~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~------~~~~~~~~~~~~~~~~~D~~~~--~   86 (255)
                      ++..+++..+.++ +.+.|   -++.++++.|++.|++|++..|++...      .+..++.+ .+...+.+|++++  +
T Consensus         9 l~~~~n~~~V~~~-l~~s~---~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G-~~~~~i~~Dv~~~~~~   83 (157)
T 3gxh_A            9 LQGIRALQQQAPQ-LLSSG---LPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG-MDYVYIPVDWQNPKVE   83 (157)
T ss_dssp             TTTSTTCEEEETT-EEEEB---CCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT-CEEEECCCCTTSCCHH
T ss_pred             hhcCcChheecCc-eeEcC---CCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcC-CeEEEecCCCCCCCHH
Confidence            4555555556565 33332   377999999999999999988865432      23333332 4577788999999  9


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCC
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCN  111 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~  111 (255)
                      +++++++.+.+.+|+ |+||||||.
T Consensus        84 ~v~~~~~~i~~~~G~-dVLVnnAgg  107 (157)
T 3gxh_A           84 DVEAFFAAMDQHKGK-DVLVHCLAN  107 (157)
T ss_dssp             HHHHHHHHHHHTTTS-CEEEECSBS
T ss_pred             HHHHHHHHHHhcCCC-CEEEECCCC
Confidence            999999999988899 999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.52  E-value=2.1e-07  Score=79.25  Aligned_cols=79  Identities=16%  Similarity=0.232  Sum_probs=60.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++|||+++++.+...|++|++++++++..+.+ +++...    ..+|.++.+++.+.+.+...  +++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  217 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFD----AAFNYKTVNSLEEALKKASP--DGYDC  217 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTSCSCHHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCc----EEEecCCHHHHHHHHHHHhC--CCCeE
Confidence            578999999999999999999999999999999988776666 454421    23577764445555554432  57999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1v3u_A          218 YFDNVG  223 (333)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999865

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.51  E-value=2.6e-10  Score=100.88  Aligned_cols=45  Identities=20%  Similarity=0.457  Sum_probs=39.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      ..+.||+++|||++ +||+++++.|...|++|+++++++....+..
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence            35789999999997 9999999999999999999999876655444

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.51  E-value=4.1e-07  Score=78.67  Aligned_cols=106  Identities=23%  Similarity=0.265  Sum_probs=75.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+++++|+|+ |++|+++++.+...|++|++++|+++..+.+.+.+.. .   +.+|.++.+++++.++       +.
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~-~---~~~~~~~~~~l~~~~~-------~~  230 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGG-R---VITLTATEANIKKSVQ-------HA  230 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-S---EEEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCc-e---EEEecCCHHHHHHHHh-------CC
Confidence            478899999999 9999999999999999999999998877766655542 2   5678888887776654       57


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGT  164 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~  164 (255)
                      |++|++++.....                      .+..+.+..++.|+  ++++|+++++.
T Consensus       231 DvVi~~~g~~~~~----------------------~~~li~~~~l~~mk--~gg~iV~v~~~  268 (369)
T 2eez_A          231 DLLIGAVLVPGAK----------------------APKLVTRDMLSLMK--EGAVIVDVAVD  268 (369)
T ss_dssp             SEEEECCC-----------------------------CCSCHHHHTTSC--TTCEEEECC--
T ss_pred             CEEEECCCCCccc----------------------cchhHHHHHHHhhc--CCCEEEEEecC
Confidence            9999976533200                      00123466677774  46889988843

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.50  E-value=4.5e-08  Score=88.50  Aligned_cols=102  Identities=19%  Similarity=0.183  Sum_probs=67.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++++|+++|||+ ||+|++++..|++.|++|++++|+.++.+++.++++. .+.    ++.+   +    ++.  ..+.+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~~-~~~----~~~d---l----~~~--~~~~~  425 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGG-KAL----SLTD---L----DNY--HPEDG  425 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTTC--CE----ETTT---T----TTC----CCS
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCC-cee----eHHH---h----hhc--cccCc
Confidence            478899999999 5999999999999999999999998888888777642 222    2222   1    100  11358


Q ss_pred             cEEEEcCCCcccc--CccCCCCCChHHHHHHHhhhhhhH
Q 025252          103 DILVNSGCNLEYR--GFVSILDTPKSDLERLLAVNTIGG  139 (255)
Q Consensus       103 d~li~~a~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~  139 (255)
                      |++|||++....+  ...++.+.+.+.+..++++|+.+.
T Consensus       426 DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          426 MVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             EEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             eEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            9999997654321  113455566778888999999875

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.50  E-value=4.7e-07  Score=80.55  Aligned_cols=79  Identities=18%  Similarity=0.172  Sum_probs=62.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|+++|+|+ |++|+++++.|++. |.+|++++|+.++.+++.+.   .++..+.+|+++.+++.++++       
T Consensus        19 ~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~~~~~~~~D~~d~~~l~~~l~-------   87 (467)
T 2axq_A           19 GRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---SGSKAISLDVTDDSALDKVLA-------   87 (467)
T ss_dssp             ----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---GTCEEEECCTTCHHHHHHHHH-------
T ss_pred             cCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---cCCcEEEEecCCHHHHHHHHc-------
Confidence            4577899999998 99999999999998 78999999998887777654   245677899999988776654       


Q ss_pred             CccEEEEcCCC
Q 025252          101 KLDILVNSGCN  111 (255)
Q Consensus       101 ~id~li~~a~~  111 (255)
                      ++|++||+++.
T Consensus        88 ~~DvVIn~tp~   98 (467)
T 2axq_A           88 DNDVVISLIPY   98 (467)
T ss_dssp             TSSEEEECSCG
T ss_pred             CCCEEEECCch
Confidence            68999998653

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.48  E-value=2.7e-07  Score=72.48  Aligned_cols=79  Identities=20%  Similarity=0.230  Sum_probs=56.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++|+|+++++.+...|++|++++++++..+.+.+ ++.   . ..+|.++.+..+.+.+...  .+++|+
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~-~g~---~-~~~d~~~~~~~~~~~~~~~--~~~~D~  110 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR-LGV---E-YVGDSRSVDFADEILELTD--GYGVDV  110 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT-TCC---S-EEEETTCSTHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCC---C-EEeeCCcHHHHHHHHHHhC--CCCCeE
Confidence            57899999999999999999999999999999998776555432 321   1 2257776554433333221  136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|++
T Consensus       111 vi~~~g  116 (198)
T 1pqw_A          111 VLNSLA  116 (198)
T ss_dssp             EEECCC
T ss_pred             EEECCc
Confidence            999764

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.40  E-value=6e-08  Score=81.02  Aligned_cols=79  Identities=19%  Similarity=0.245  Sum_probs=57.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCC--ceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.+|+++|||++ |+|+++++.|++.| +|++++|+.++.+++.+++...  ....+.+|+++.          .+..+
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 9999999988777776654310  000123455441          23457


Q ss_pred             CccEEEEcCCCcc
Q 025252          101 KLDILVNSGCNLE  113 (255)
Q Consensus       101 ~id~li~~a~~~~  113 (255)
                      ++|++|||++...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999976543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=2e-06  Score=72.52  Aligned_cols=79  Identities=14%  Similarity=0.208  Sum_probs=60.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC---cchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ---DNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++.. ........++.+.+++.+.+.   
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~---  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA---  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc---
Confidence            4678999999998 7999999999999998 89999999   6777777666532 123334457777666655443   


Q ss_pred             HHcCCccEEEEc
Q 025252           97 AKFGKLDILVNS  108 (255)
Q Consensus        97 ~~~g~id~li~~  108 (255)
                          ..|++||+
T Consensus       226 ----~aDiIINa  233 (315)
T 3tnl_A          226 ----ESVIFTNA  233 (315)
T ss_dssp             ----TCSEEEEC
T ss_pred             ----CCCEEEEC
Confidence                67999996

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.31  E-value=1.8e-06  Score=73.81  Aligned_cols=79  Identities=22%  Similarity=0.363  Sum_probs=59.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|+++++.+...|++|++++++++..+.+. +++..    ..+|.++.+++.+.++++..  +++|+
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~D~  241 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGE----VFIDFTKEKDIVGAVLKATD--GGAHG  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCC----EEEETTTCSCHHHHHHHHHT--SCEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCc----eEEecCccHhHHHHHHHHhC--CCCCE
Confidence            5789999999999999999999999999999999887765443 44321    23487755556666655543  37999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       242 vi~~~g  247 (347)
T 2hcy_A          242 VINVSV  247 (347)
T ss_dssp             EEECSS
T ss_pred             EEECCC
Confidence            999764

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.31  E-value=2.4e-06  Score=63.26  Aligned_cols=73  Identities=16%  Similarity=0.192  Sum_probs=58.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ..++++|+|+ |.+|+++++.|.++|++|++++++++..+++.+.    .+.++.+|.++++.++++      ...+.|+
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----~~~~~~gd~~~~~~l~~~------~~~~~d~   73 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----GFDAVIADPTDESFYRSL------DLEGVSA   73 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----TCEEEECCTTCHHHHHHS------CCTTCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----CCcEEECCCCCHHHHHhC------CcccCCE
Confidence            3467999998 7799999999999999999999998877666542    467889999999877654      1246899


Q ss_pred             EEEc
Q 025252          105 LVNS  108 (255)
Q Consensus       105 li~~  108 (255)
                      +|.+
T Consensus        74 vi~~   77 (141)
T 3llv_A           74 VLIT   77 (141)
T ss_dssp             EEEC
T ss_pred             EEEe
Confidence            9873

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.28  E-value=9.1e-07  Score=73.18  Aligned_cols=76  Identities=14%  Similarity=0.192  Sum_probs=56.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++.+|+++|+|+ ||+|+++++.|++.|++|++++|+.++.+++.++++... .   +|..+.+++       .+  ++.
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~---~~~~~~~~~-------~~--~~~  181 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-S---IQALSMDEL-------EG--HEF  181 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-S---EEECCSGGG-------TT--CCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-C---eeEecHHHh-------cc--CCC
Confidence            568999999998 799999999999999999999999888888877654211 1   122222221       11  589


Q ss_pred             cEEEEcCCCc
Q 025252          103 DILVNSGCNL  112 (255)
Q Consensus       103 d~li~~a~~~  112 (255)
                      |++||+++..
T Consensus       182 DivVn~t~~~  191 (271)
T 1nyt_A          182 DLIINATSSG  191 (271)
T ss_dssp             SEEEECCSCG
T ss_pred             CEEEECCCCC
Confidence            9999986544

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.28  E-value=4.4e-06  Score=71.04  Aligned_cols=158  Identities=13%  Similarity=0.071  Sum_probs=92.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecC----cchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQ----DNLGQALADKLGHQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++++||||+|.+|..++..|+..|.       +|++.+++    +++.+.....+.+....+ ..|+....+..+++  
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~~~~~~al--   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAHADPMTAF--   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEESSHHHHT--
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEecCcHHHh--
Confidence            45799999999999999999999885       89999988    443433233332211011 12443333333333  


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc-c-cc
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC-T-EI  172 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~-~-~~  172 (255)
                           .+.|++|+.|+.....      ..+.+   +.+..|+.....+++.+.++-  ...++++++|....... . ..
T Consensus        82 -----~~aD~Vi~~ag~~~~~------g~~r~---dl~~~N~~i~~~i~~~i~~~~--~p~a~ii~~SNPv~~~t~~~~~  145 (329)
T 1b8p_A           82 -----KDADVALLVGARPRGP------GMERK---DLLEANAQIFTVQGKAIDAVA--SRNIKVLVVGNPANTNAYIAMK  145 (329)
T ss_dssp             -----TTCSEEEECCCCCCCT------TCCHH---HHHHHHHHHHHHHHHHHHHHS--CTTCEEEECSSSHHHHHHHHHH
T ss_pred             -----CCCCEEEEeCCCCCCC------CCCHH---HHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccCchHHHHHHHHH
Confidence                 3689999987654311      12333   457888888888888777641  14578888883210000 0 00


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhc
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELG  202 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~  202 (255)
                      ..++..+...|+.++---..+-..+++.+.
T Consensus       146 ~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          146 SAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            111122224588887655566677777653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.26  E-value=1.3e-06  Score=74.55  Aligned_cols=80  Identities=16%  Similarity=0.226  Sum_probs=59.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|++|++|+++++.+...|++|+++++++++.+.+.++++..    ..+|.++.+++.+.++++..  +++|+
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d~  228 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFD----DAFNYKEESDLTAALKRCFP--NGIDI  228 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCS----EEEETTSCSCSHHHHHHHCT--TCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCc----eEEecCCHHHHHHHHHHHhC--CCCcE
Confidence            5789999999999999999999999999999999987776665455422    22476654444444444321  47999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       229 vi~~~g  234 (345)
T 2j3h_A          229 YFENVG  234 (345)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999754

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.23  E-value=9.8e-07  Score=65.15  Aligned_cols=75  Identities=16%  Similarity=0.306  Sum_probs=55.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++++++|+|+ |++|+.+++.|.+.|++|++++++++..+.+.+    .....+.+|.++.+.++++      ..++.|
T Consensus         4 ~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~----~~~~~~~~d~~~~~~l~~~------~~~~~d   72 (144)
T 2hmt_A            4 IKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS----YATHAVIANATEENELLSL------GIRNFE   72 (144)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTT----TCSEEEECCTTCHHHHHTT------TGGGCS
T ss_pred             CcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----hCCEEEEeCCCCHHHHHhc------CCCCCC
Confidence            45677999998 999999999999999999999998665443222    2345678899987665433      124689


Q ss_pred             EEEEcC
Q 025252          104 ILVNSG  109 (255)
Q Consensus       104 ~li~~a  109 (255)
                      ++|++.
T Consensus        73 ~vi~~~   78 (144)
T 2hmt_A           73 YVIVAI   78 (144)
T ss_dssp             EEEECC
T ss_pred             EEEECC
Confidence            999854

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.22  E-value=2.6e-06  Score=72.21  Aligned_cols=79  Identities=20%  Similarity=0.128  Sum_probs=57.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||++++|+++++.+...|++|+++++++++.+.+.+ ++..    ..+|.++.+..+.+.+...  ..++|+
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~--~~~~D~  212 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW----QVINYREEDLVERLKEITG--GKKVRV  212 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHTT--TCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCccHHHHHHHHhC--CCCceE
Confidence            57899999999999999999999999999999998776665544 4322    2247666544433333221  136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|+|
T Consensus       213 vi~~~g  218 (327)
T 1qor_A          213 VYDSVG  218 (327)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999875

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.21  E-value=3.5e-06  Score=71.61  Aligned_cols=79  Identities=18%  Similarity=0.183  Sum_probs=56.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|+++++.+...|++|++++++++..+.+.+ ++..    ..+|.++.+..+.+.+.. . ..++|+
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~-~g~~----~~~d~~~~~~~~~i~~~~-~-~~~~d~  217 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK-LGCH----HTINYSTQDFAEVVREIT-G-GKGVDV  217 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHHHHHHHH-T-TCCEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCC----EEEECCCHHHHHHHHHHh-C-CCCCeE
Confidence            57899999999999999999999999999999999876665543 4322    234766654433333222 1 136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|+|
T Consensus       218 vi~~~g  223 (333)
T 1wly_A          218 VYDSIG  223 (333)
T ss_dssp             EEECSC
T ss_pred             EEECCc
Confidence            999865

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.19  E-value=3.7e-06  Score=72.17  Aligned_cols=79  Identities=19%  Similarity=0.280  Sum_probs=57.0

Q ss_pred             cC--eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QG--RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~--k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+  ++++|+|+++++|+++++.+...|+ +|++++++++..+.+.++++..    ..+|.++.+ ..+.+.+...  ++
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~----~~~d~~~~~-~~~~~~~~~~--~~  230 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFD----AAINYKKDN-VAEQLRESCP--AG  230 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCS----EEEETTTSC-HHHHHHHHCT--TC
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc----eEEecCchH-HHHHHHHhcC--CC
Confidence            46  8999999999999999999999999 9999999887776666545422    235766533 2222222211  36


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|+|+|
T Consensus       231 ~d~vi~~~G  239 (357)
T 2zb4_A          231 VDVYFDNVG  239 (357)
T ss_dssp             EEEEEESCC
T ss_pred             CCEEEECCC
Confidence            999999865

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.16  E-value=5.1e-06  Score=70.64  Aligned_cols=79  Identities=22%  Similarity=0.304  Sum_probs=57.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|++|++|.++++.+...|++|+++++++++.+.+.++++..    ...|.++.+..+. +.+..  .+++|+
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~----~~~~~~~~~~~~~-~~~~~--~~~~d~  221 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFD----GAIDYKNEDLAAG-LKREC--PKGIDV  221 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCS----EEEETTTSCHHHH-HHHHC--TTCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCC----EEEECCCHHHHHH-HHHhc--CCCceE
Confidence            5889999999999999999999999999999999988777765555432    2246655433222 22221  247999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+++|
T Consensus       222 vi~~~g  227 (336)
T 4b7c_A          222 FFDNVG  227 (336)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999764

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.15  E-value=5.1e-06  Score=71.25  Aligned_cols=79  Identities=22%  Similarity=0.247  Sum_probs=56.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||++++|+++++.+...|++|+++++++++.+.+ .+++..    ..+|.++.+..+.+.+.. . .+++|+
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~----~~~~~~~~~~~~~~~~~~-~-~~~~d~  234 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAA----AGFNYKKEDFSEATLKFT-K-GAGVNL  234 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCS----EEEETTTSCHHHHHHHHT-T-TSCEEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCc----EEEecCChHHHHHHHHHh-c-CCCceE
Confidence            578999999999999999999999999999999988776665 444422    235666544333322211 1 136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|+|
T Consensus       235 vi~~~G  240 (354)
T 2j8z_A          235 ILDCIG  240 (354)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999865

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.12  E-value=7.8e-06  Score=70.04  Aligned_cols=79  Identities=14%  Similarity=0.203  Sum_probs=56.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|++|++|+++++.+...|++|+++++++++.+.+ .+++..    ..+|.++.+..+++.+.. . .+++|+
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~----~~~d~~~~~~~~~~~~~~-~-~~~~D~  242 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAH----EVFNHREVNYIDKIKKYV-G-EKGIDI  242 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTSTTHHHHHHHHH-C-TTCEEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcCCC----EEEeCCCchHHHHHHHHc-C-CCCcEE
Confidence            578999999999999999999999999999999988776643 444322    235766654333332221 1 126999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+|+|
T Consensus       243 vi~~~G  248 (351)
T 1yb5_A          243 IIEMLA  248 (351)
T ss_dssp             EEESCH
T ss_pred             EEECCC
Confidence            999764

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.07  E-value=7.2e-05  Score=63.38  Aligned_cols=115  Identities=17%  Similarity=0.209  Sum_probs=71.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCCceE-EEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQDVC-YIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .++++||||+|.+|..++..|+..|  .+|++.+++++ ..... ++...... .+.. +++..+.+++++       +.
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~-dL~~~~~~~~v~~-~~~t~d~~~al~-------ga   77 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTA-DISHMDTGAVVRG-FLGQQQLEAALT-------GM   77 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHH-HHHTSCSSCEEEE-EESHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHH-HhhcccccceEEE-EeCCCCHHHHcC-------CC
Confidence            3579999999999999999999988  78999998776 22221 12111100 1111 223444444433       78


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      |++|+.|+.....      ..+.+   ..+..|+.....+++.+.++   ...+.|+++|
T Consensus        78 DvVi~~ag~~~~~------g~~r~---dl~~~N~~~~~~i~~~i~~~---~p~~~viv~S  125 (326)
T 1smk_A           78 DLIIVPAGVPRKP------GMTRD---DLFKINAGIVKTLCEGIAKC---CPRAIVNLIS  125 (326)
T ss_dssp             SEEEECCCCCCCS------SCCCS---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CEEEEcCCcCCCC------CCCHH---HHHHHHHHHHHHHHHHHHhh---CCCeEEEEEC
Confidence            9999987654321      11222   34678888888888887764   2445666655

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.06  E-value=1.7e-05  Score=59.42  Aligned_cols=75  Identities=13%  Similarity=0.183  Sum_probs=57.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .++.++|+|+ |.+|+.+++.|.+.|++|+++++++ +..+++.+... ..+.++.+|.++++.++++      ...+.|
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a------~i~~ad   73 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKA------GIDRCR   73 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHH------TTTTCS
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-CCCeEEEcCCCCHHHHHHc------ChhhCC
Confidence            4567889986 9999999999999999999999974 44444444433 3578899999998876554      123679


Q ss_pred             EEEE
Q 025252          104 ILVN  107 (255)
Q Consensus       104 ~li~  107 (255)
                      .+|.
T Consensus        74 ~vi~   77 (153)
T 1id1_A           74 AILA   77 (153)
T ss_dssp             EEEE
T ss_pred             EEEE
Confidence            8886

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.01  E-value=2.3e-05  Score=65.89  Aligned_cols=79  Identities=15%  Similarity=0.326  Sum_probs=57.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC---cchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ---DNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .++.+|+++|+|+ ||.|++++..|++.|. +|.++.|+   .++.+++.+++.. ........+..+.+...+.++   
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~---  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA---  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc---
Confidence            4578999999998 8999999999999998 89999999   6667776665532 122233446655433333322   


Q ss_pred             HHcCCccEEEEc
Q 025252           97 AKFGKLDILVNS  108 (255)
Q Consensus        97 ~~~g~id~li~~  108 (255)
                          ..|++||+
T Consensus       220 ----~~DiIINa  227 (312)
T 3t4e_A          220 ----SADILTNG  227 (312)
T ss_dssp             ----HCSEEEEC
T ss_pred             ----CceEEEEC
Confidence                46999996

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.96  E-value=2.2e-05  Score=67.00  Aligned_cols=79  Identities=16%  Similarity=0.313  Sum_probs=55.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++|+|+++++|+++++.+... |++|+++++++++.+.+. +++..    ..+|.++.+..++ +.+.... +++|
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~----~~~~~~~~~~~~~-~~~~~~~-~~~d  242 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGAD----YVINASMQDPLAE-IRRITES-KGVD  242 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHHHH-HHHHTTT-SCEE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCC----EEecCCCccHHHH-HHHHhcC-CCce
Confidence            5789999999999999999999998 999999999887766554 44422    2246655433222 2222111 5899


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|+++|
T Consensus       243 ~vi~~~g  249 (347)
T 1jvb_A          243 AVIDLNN  249 (347)
T ss_dssp             EEEESCC
T ss_pred             EEEECCC
Confidence            9999865

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.95  E-value=4.4e-05  Score=55.78  Aligned_cols=73  Identities=18%  Similarity=0.358  Sum_probs=55.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.+.+..   .+.++..|.++.+.+.+.      ...+.|++
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---~~~~~~~d~~~~~~l~~~------~~~~~d~v   73 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDA------GIEDADMY   73 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---CcEEEEcCCCCHHHHHHc------CcccCCEE
Confidence            457899987 99999999999999999999999887766655432   355678899887765331      12468999


Q ss_pred             EEc
Q 025252          106 VNS  108 (255)
Q Consensus       106 i~~  108 (255)
                      |.+
T Consensus        74 i~~   76 (140)
T 1lss_A           74 IAV   76 (140)
T ss_dssp             EEC
T ss_pred             EEe
Confidence            984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.90  E-value=5e-05  Score=65.02  Aligned_cols=78  Identities=26%  Similarity=0.313  Sum_probs=56.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|.++++.+...|++|+++++++++.+.+.+ ++...    ..|.++.+..+.+ .+..  .+++|+
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~----~~~~~~~~~~~~~-~~~~--~~g~Dv  238 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER-LGAKR----GINYRSEDFAAVI-KAET--GQGVDI  238 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HTCSE----EEETTTSCHHHHH-HHHH--SSCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCCE----EEeCCchHHHHHH-HHHh--CCCceE
Confidence            57899999999999999999999999999999999887765554 44221    2455554333332 3222  357999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+++|
T Consensus       239 vid~~g  244 (353)
T 4dup_A          239 ILDMIG  244 (353)
T ss_dssp             EEESCC
T ss_pred             EEECCC
Confidence            999765

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.88  E-value=3.9e-05  Score=66.01  Aligned_cols=74  Identities=16%  Similarity=0.237  Sum_probs=57.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +.-+.++|+|.|+ |++|+.+++.|++ .++|.+.+++.+.++++.+     .+..+.+|++|.+++.++++       +
T Consensus        12 ~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-----~~~~~~~d~~d~~~l~~~~~-------~   77 (365)
T 3abi_A           12 IEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-----FATPLKVDASNFDKLVEVMK-------E   77 (365)
T ss_dssp             ----CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-----TSEEEECCTTCHHHHHHHHT-------T
T ss_pred             ccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-----cCCcEEEecCCHHHHHHHHh-------C
Confidence            4445557999998 9999999999865 5899999998877665432     46678899999998887765       6


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      .|++||++
T Consensus        78 ~DvVi~~~   85 (365)
T 3abi_A           78 FELVIGAL   85 (365)
T ss_dssp             CSEEEECC
T ss_pred             CCEEEEec
Confidence            79999964

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.87  E-value=3.6e-05  Score=63.87  Aligned_cols=75  Identities=23%  Similarity=0.368  Sum_probs=54.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCC--ceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++++|+++|+|+ ||+|++++..|++.|. +|++++|+.++.+++.+++...  .+.....+..+   +.+.++      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            468999999998 7999999999999998 7999999998887777665421  12233334333   333333      


Q ss_pred             CCccEEEEc
Q 025252          100 GKLDILVNS  108 (255)
Q Consensus       100 g~id~li~~  108 (255)
                       ..|++||+
T Consensus       194 -~~DiVIna  201 (283)
T 3jyo_A          194 -AADGVVNA  201 (283)
T ss_dssp             -HSSEEEEC
T ss_pred             -cCCEEEEC
Confidence             46999996

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=97.86  E-value=4e-05  Score=65.32  Aligned_cols=79  Identities=16%  Similarity=0.191  Sum_probs=56.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+++++|+.+++.+...|++|+++++++++.+.+. +++...    .+|.++.+ +.+.+.+... ..++|+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~----~~d~~~~~-~~~~~~~~~~-~~~~d~  238 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADE----TVNYTHPD-WPKEVRRLTG-GKGADK  238 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSE----EEETTSTT-HHHHHHHHTT-TTCEEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE----EEcCCccc-HHHHHHHHhC-CCCceE
Confidence            5789999999999999999999999999999999887766654 344221    24776643 2222222211 137999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       239 vi~~~g  244 (343)
T 2eih_A          239 VVDHTG  244 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999865

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.83  E-value=4.8e-05  Score=62.79  Aligned_cols=75  Identities=12%  Similarity=0.216  Sum_probs=55.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCC-ceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|+++|+|+ ||+|++++..|++.|.+|++++|+.++.+++.++++.. .+.  ..|+   +++.       +  +
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~~-------~--~  179 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSIP-------L--Q  179 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGCC-------C--S
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHhc-------c--C
Confidence            3568899999998 79999999999999999999999998888887766421 222  2333   1110       1  4


Q ss_pred             CccEEEEcCCC
Q 025252          101 KLDILVNSGCN  111 (255)
Q Consensus       101 ~id~li~~a~~  111 (255)
                      ..|++||+++.
T Consensus       180 ~~DivIn~t~~  190 (272)
T 1p77_A          180 TYDLVINATSA  190 (272)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.82  E-value=4.3e-05  Score=63.89  Aligned_cols=75  Identities=16%  Similarity=0.264  Sum_probs=55.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+|+++|+|+ ||+|++++..|++.|. +|++++|+.++.+++.++++...-..     .+.+++.       +....
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~-----~~~~~~~-------~~~~~  204 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY-----FSLAEAE-------TRLAE  204 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE-----ECHHHHH-------HTGGG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce-----eeHHHHH-------hhhcc
Confidence            568899999998 7899999999999997 99999999988888887765310011     1222222       22347


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      .|++||+.+
T Consensus       205 aDivIn~t~  213 (297)
T 2egg_A          205 YDIIINTTS  213 (297)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            899999753

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.79  E-value=5.2e-05  Score=64.10  Aligned_cols=77  Identities=19%  Similarity=0.194  Sum_probs=55.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      .+++++|+||+|++|++.++.+...|++|+++++++++.+.+. +++..    ...|.++.+..+    ++.+..  .++
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~----~~~~~~~~~~~~----~~~~~~~~~g~  210 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAW----ETIDYSHEDVAK----RVLELTDGKKC  210 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCS----EEEETTTSCHHH----HHHHHTTTCCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCC----EEEeCCCccHHH----HHHHHhCCCCc
Confidence            5789999999999999999999999999999999887766554 44422    123555433322    233322  369


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++++++|
T Consensus       211 Dvvid~~g  218 (325)
T 3jyn_A          211 PVVYDGVG  218 (325)
T ss_dssp             EEEEESSC
T ss_pred             eEEEECCC
Confidence            99999765

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.78  E-value=5.4e-05  Score=66.87  Aligned_cols=85  Identities=24%  Similarity=0.282  Sum_probs=58.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEE-EeeCC---------CHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI-HCDVS---------NEREVINLVDT   94 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~D~~---------~~~~~~~~~~~   94 (255)
                      .|++++|+|++|++|.+.++.+...|++|+++++++++.+.+ .+++...+.-. ..|+.         +.++++++.++
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL  298 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecccccccccccccccccchhhhHHHHH
Confidence            578999999999999999999999999999999887776655 44543222110 11221         12445555666


Q ss_pred             HHHHcC-CccEEEEcCC
Q 025252           95 TVAKFG-KLDILVNSGC  110 (255)
Q Consensus        95 ~~~~~g-~id~li~~a~  110 (255)
                      +.+..+ ++|++++++|
T Consensus       299 v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          299 VVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHSSCCSEEEECSC
T ss_pred             HHHHhCCCceEEEECCC
Confidence            666554 6999999754

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.78  E-value=6.6e-05  Score=63.87  Aligned_cols=77  Identities=19%  Similarity=0.123  Sum_probs=55.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      .+++++|+|+++++|..+++.+...|++|+++++++++.+.+.+ ++...    ..|.++.+..+    ++.+..  .++
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-lga~~----~~~~~~~~~~~----~~~~~~~~~g~  214 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR-LGAAY----VIDTSTAPLYE----TVMELTNGIGA  214 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSE----EEETTTSCHHH----HHHHHTTTSCE
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-CCCcE----EEeCCcccHHH----HHHHHhCCCCC
Confidence            57899999999999999999998899999999999887766554 44221    23555433222    222222  379


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|+++|
T Consensus       215 Dvvid~~g  222 (340)
T 3gms_A          215 DAAIDSIG  222 (340)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999764

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.77  E-value=5.4e-05  Score=64.21  Aligned_cols=77  Identities=18%  Similarity=0.223  Sum_probs=54.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      .+++++|+||+|++|.+.++.+...|++|+++++++++.+.+ .+++..    ...|.++.+..+    ++.+..  .++
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~----~~~~~~~~~~~~----~~~~~~~~~g~  218 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYGAE----YLINASKEDILR----QVLKFTNGKGV  218 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCS----EEEETTTSCHHH----HHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCc----EEEeCCCchHHH----HHHHHhCCCCc
Confidence            578999999999999999999999999999999988776644 444422    123555433222    222222  369


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++++++|
T Consensus       219 D~vid~~g  226 (334)
T 3qwb_A          219 DASFDSVG  226 (334)
T ss_dssp             EEEEECCG
T ss_pred             eEEEECCC
Confidence            99999765

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.73  E-value=0.00015  Score=62.31  Aligned_cols=76  Identities=26%  Similarity=0.281  Sum_probs=55.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++++++|+|+ |++|+++++.+...|++|++++|++++++.+.+... ..+.   .+..+.+++.+.+.       +.|
T Consensus       165 l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-~~~~---~~~~~~~~~~~~~~-------~~D  232 (361)
T 1pjc_A          165 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-SRVE---LLYSNSAEIETAVA-------EAD  232 (361)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGSE---EEECCHHHHHHHHH-------TCS
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-ceeE---eeeCCHHHHHHHHc-------CCC
Confidence            56789999999 999999999999999999999999888777665543 1221   22334454443332       689


Q ss_pred             EEEEcCCC
Q 025252          104 ILVNSGCN  111 (255)
Q Consensus       104 ~li~~a~~  111 (255)
                      ++|++.+.
T Consensus       233 vVI~~~~~  240 (361)
T 1pjc_A          233 LLIGAVLV  240 (361)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99997543

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.72  E-value=5.7e-05  Score=56.73  Aligned_cols=77  Identities=17%  Similarity=0.195  Sum_probs=55.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+..+++++|+|+ |.+|+.+++.|.+.|++|++++++++..+.+.+   ......+..|.++++.+.++      ...+
T Consensus        15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g~~~~~~d~~~~~~l~~~------~~~~   84 (155)
T 2g1u_A           15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFSGFTVVGDAAEFETLKEC------GMEK   84 (155)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCCSEEEESCTTSHHHHHTT------TGGG
T ss_pred             cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCCCcEEEecCCCHHHHHHc------Cccc
Confidence            3456788999996 999999999999999999999999876544321   22455677888886654321      1236


Q ss_pred             ccEEEEc
Q 025252          102 LDILVNS  108 (255)
Q Consensus       102 id~li~~  108 (255)
                      .|++|.+
T Consensus        85 ad~Vi~~   91 (155)
T 2g1u_A           85 ADMVFAF   91 (155)
T ss_dssp             CSEEEEC
T ss_pred             CCEEEEE
Confidence            7999874

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=97.70  E-value=8.6e-05  Score=63.81  Aligned_cols=74  Identities=20%  Similarity=0.344  Sum_probs=52.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +++++++|+|+ |++|..+++.+...|++|+++++++   ++.+. ..+++   ...+  | ++  ++.+.+.+ . . +
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~~~~g---a~~v--~-~~--~~~~~~~~-~-~-~  245 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTV-IEETK---TNYY--N-SS--NGYDKLKD-S-V-G  245 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHH-HHHHT---CEEE--E-CT--TCSHHHHH-H-H-C
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHH-HHHhC---Ccee--c-hH--HHHHHHHH-h-C-C
Confidence            45899999999 9999999999999999999999987   65543 34443   2333  6 54  32222333 1 2 5


Q ss_pred             CccEEEEcCC
Q 025252          101 KLDILVNSGC  110 (255)
Q Consensus       101 ~id~li~~a~  110 (255)
                      ++|++|++++
T Consensus       246 ~~d~vid~~g  255 (366)
T 2cdc_A          246 KFDVIIDATG  255 (366)
T ss_dssp             CEEEEEECCC
T ss_pred             CCCEEEECCC
Confidence            8999999765

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.68  E-value=0.0002  Score=61.94  Aligned_cols=76  Identities=18%  Similarity=0.276  Sum_probs=58.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+.+++++|+|+ |++|+++++.+...|++|++.+++++..+.+.+.++. .+   ..|.++.+++++.++       +.
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~-~~---~~~~~~~~~l~~~l~-------~a  232 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCG-RI---HTRYSSAYELEGAVK-------RA  232 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTT-SS---EEEECCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCC-ee---EeccCCHHHHHHHHc-------CC
Confidence            478999999998 9999999999999999999999998877766665542 22   234455666655443       57


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|++.+
T Consensus       233 DvVi~~~~  240 (377)
T 2vhw_A          233 DLVIGAVL  240 (377)
T ss_dssp             SEEEECCC
T ss_pred             CEEEECCC
Confidence            99999754

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.67  E-value=0.0003  Score=59.96  Aligned_cols=78  Identities=13%  Similarity=0.162  Sum_probs=53.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +++++|+||+|++|...++.+...|++|+++++++++.+.+. +++...    ..|.++.+ +.+.+.+.... .++|++
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~----~~~~~~~~-~~~~v~~~~~~-~g~D~v  237 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAH----VLNEKAPD-FEATLREVMKA-EQPRIF  237 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSE----EEETTSTT-HHHHHHHHHHH-HCCCEE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCE----EEECCcHH-HHHHHHHHhcC-CCCcEE
Confidence            379999999999999999999889999999999888766654 444221    23544433 22222222211 279999


Q ss_pred             EEcCC
Q 025252          106 VNSGC  110 (255)
Q Consensus       106 i~~a~  110 (255)
                      +++++
T Consensus       238 id~~g  242 (349)
T 3pi7_A          238 LDAVT  242 (349)
T ss_dssp             EESSC
T ss_pred             EECCC
Confidence            99754

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.66  E-value=0.00021  Score=60.82  Aligned_cols=76  Identities=21%  Similarity=0.297  Sum_probs=54.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-C-Cc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-G-KL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~i  102 (255)
                      .+++++|+|++|++|.+.++.+...|++|+++++++++.+.+.+ ++...  .  .|..  +++.   +++.+.. + ++
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~ga~~--v--~~~~--~~~~---~~v~~~~~~~g~  228 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS-VGADI--V--LPLE--EGWA---KAVREATGGAGV  228 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSE--E--EESS--TTHH---HHHHHHTTTSCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcE--E--ecCc--hhHH---HHHHHHhCCCCc
Confidence            57899999999999999999999999999999998887755544 44221  2  2433  2232   2333333 2 69


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++++++|
T Consensus       229 Dvvid~~g  236 (342)
T 4eye_A          229 DMVVDPIG  236 (342)
T ss_dssp             EEEEESCC
T ss_pred             eEEEECCc
Confidence            99999765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.65  E-value=7.4e-05  Score=57.61  Aligned_cols=76  Identities=13%  Similarity=0.156  Sum_probs=57.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+++++|.|+ |.+|+.+++.|.+. |++|++++++++..+++.+.    .+..+.+|.++.+.++++     ....+
T Consensus        36 ~~~~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----g~~~~~gd~~~~~~l~~~-----~~~~~  105 (183)
T 3c85_A           36 NPGHAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----GRNVISGDATDPDFWERI-----LDTGH  105 (183)
T ss_dssp             CCTTCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----TCCEEECCTTCHHHHHTB-----CSCCC
T ss_pred             CCCCCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----CCCEEEcCCCCHHHHHhc-----cCCCC
Confidence            456777899985 89999999999999 99999999998876665542    456778899988755432     01246


Q ss_pred             ccEEEEc
Q 025252          102 LDILVNS  108 (255)
Q Consensus       102 id~li~~  108 (255)
                      .|++|.+
T Consensus       106 ad~vi~~  112 (183)
T 3c85_A          106 VKLVLLA  112 (183)
T ss_dssp             CCEEEEC
T ss_pred             CCEEEEe
Confidence            8999873

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.63  E-value=2.5e-05  Score=65.90  Aligned_cols=151  Identities=16%  Similarity=0.122  Sum_probs=85.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEec--CcchHHH----HHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADV--QDNLGQA----LADKLGH--QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r--~~~~~~~----~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++||||+|++|..++..|+..|.  ++++.++  ++++.+.    +.+....  ..+.+...|    +++.+       
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~-------   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLR-------   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGG-------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHH-------
Confidence            589999999999999999998874  6888888  5543322    1111110  122222211    11111       


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccc-ccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTAC-TEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~-~~~~~~~  176 (255)
                      .+.+.|++||.|+.....      ..+.   ...++.|+..+..+++.+.++   . .+.++++|....... ......+
T Consensus        71 al~gaD~Vi~~Ag~~~~~------g~~r---~dl~~~N~~i~~~i~~~i~~~---~-~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE------GMSR---MDLAKTNAKIVGKYAKKIAEI---C-DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT------TCCH---HHHHHHHHHHHHHHHHHHHHH---C-CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             HhCCCCEEEECCCCCCCC------CCcH---HHHHHHHHHHHHHHHHHHHHh---C-CeEEEEecCcHHHHHHHHHHhhC
Confidence            223789999988754311      1233   345888999988888888765   2 456666662110000 0001112


Q ss_pred             CCCCccccc-chHHHHHHHHHHHHHhc
Q 025252          177 NIPANYYGV-SKFGILGLVKSLAAELG  202 (255)
Q Consensus       177 ~~~~~~Y~a-sKaa~~~~~~~la~e~~  202 (255)
                      ..+...++. +.--...+-..+++.+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            233356777 66545556666776653

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.63  E-value=0.00012  Score=64.94  Aligned_cols=85  Identities=18%  Similarity=0.228  Sum_probs=61.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEE-Eee--------CCCHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI-HCD--------VSNEREVINLVDTT   95 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~D--------~~~~~~~~~~~~~~   95 (255)
                      .|++++|+|++|++|...++.+...|++|+++++++++.+.+ .+++...+.-. ..|        .++.++++++.+++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i  306 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI  306 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHH
Confidence            578999999999999999999988999999999877766555 44543221100 011        24567777777777


Q ss_pred             HHHcC--CccEEEEcCC
Q 025252           96 VAKFG--KLDILVNSGC  110 (255)
Q Consensus        96 ~~~~g--~id~li~~a~  110 (255)
                      .+..+  ++|+++.++|
T Consensus       307 ~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          307 RELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHTSCCEEEEEECSC
T ss_pred             HHHhCCCCCcEEEEcCC
Confidence            77553  7999998654

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.58  E-value=0.00017  Score=53.09  Aligned_cols=70  Identities=13%  Similarity=0.153  Sum_probs=56.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +.++|.|. |.+|+.+++.|.+.|++|++++++++..+++.+    ..+.++.+|.++++.++++      ...+.|++|
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g~~~i~gd~~~~~~l~~a------~i~~ad~vi   76 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RGVRAVLGNAANEEIMQLA------HLECAKWLI   76 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TTCEEEESCTTSHHHHHHT------TGGGCSEEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cCCCEEECCCCCHHHHHhc------CcccCCEEE
Confidence            34788887 889999999999999999999999888776654    2567889999999876553      113678888


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      .
T Consensus        77 ~   77 (140)
T 3fwz_A           77 L   77 (140)
T ss_dssp             E
T ss_pred             E
Confidence            6

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.55  E-value=0.00019  Score=56.97  Aligned_cols=70  Identities=27%  Similarity=0.295  Sum_probs=56.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++|+|+ |.+|+.+++.|.++|++|++++++++..+++.+..   ...++.+|.++++.++++      ...+.|++|.
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~---~~~~i~gd~~~~~~l~~a------~i~~ad~vi~   71 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL---KATIIHGDGSHKEILRDA------EVSKNDVVVI   71 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS---SSEEEESCTTSHHHHHHH------TCCTTCEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc---CCeEEEcCCCCHHHHHhc------CcccCCEEEE
Confidence            4899997 88999999999999999999999988877766543   466889999998876643      1236788886

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.52  E-value=0.00021  Score=61.37  Aligned_cols=78  Identities=23%  Similarity=0.265  Sum_probs=53.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|..+++.+...|++|+++++++++.+.+.+ ++...    ..|.++. ++.+.+.+..  -+++|+
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~-~Ga~~----~~~~~~~-~~~~~~~~~~--~~g~D~  234 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS-LGCDR----PINYKTE-PVGTVLKQEY--PEGVDV  234 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCSE----EEETTTS-CHHHHHHHHC--TTCEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-cCCcE----EEecCCh-hHHHHHHHhc--CCCCCE
Confidence            57899999999999999999999999999999998776655543 44221    2344432 2223333221  146999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       235 vid~~g  240 (362)
T 2c0c_A          235 VYESVG  240 (362)
T ss_dssp             EEECSC
T ss_pred             EEECCC
Confidence            999754

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.51  E-value=0.00012  Score=61.34  Aligned_cols=92  Identities=15%  Similarity=0.223  Sum_probs=62.5

Q ss_pred             eecCeE-EEEecCCC-----------------h-HHHHHHHHHHHcCCEEEEEecCcchHH--------HHHHHh-----
Q 025252           23 RLQGRV-AIITGGAS-----------------G-IGASAAQLFHKNGAKVVIADVQDNLGQ--------ALADKL-----   70 (255)
Q Consensus        23 ~~~~k~-~lVtGas~-----------------g-iG~aia~~l~~~g~~v~~~~r~~~~~~--------~~~~~~-----   70 (255)
                      ++.||+ ++||+|.+                 | .|.++|++++++|++|+++.+......        .+.+.+     
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~sl~p~~r~~~~~~~~~~~~~~~~  112 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARSAFPYAHRFPPQTWLSALRPSGP  112 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTSCCTTGGGSCHHHHHHHCEECCC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCCcCcchhccCccchhhhhccccc
Confidence            367888 99998876                 6 999999999999999999988643211        001111     


Q ss_pred             CCCceEEEEeeCCCHHHHHHHHHHH------------------------------HHHcCCccEEEEcCCCccc
Q 025252           71 GHQDVCYIHCDVSNEREVINLVDTT------------------------------VAKFGKLDILVNSGCNLEY  114 (255)
Q Consensus        71 ~~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~id~li~~a~~~~~  114 (255)
                      ....+..+..|+...+++.+++.+.                              .+.+++.|++|.+|+...+
T Consensus       113 ~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf  186 (313)
T 1p9o_A          113 ALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDF  186 (313)
T ss_dssp             -CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSE
T ss_pred             cccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhc
Confidence            0123456677777776666666543                              2335678999999776553

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.50  E-value=0.00034  Score=58.32  Aligned_cols=73  Identities=19%  Similarity=0.276  Sum_probs=52.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|++|++|+.+++.+...|++|+++++++++.+.+. +++...    ..|.++.++.   .+++    +++|+
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~----~~~~~~~~~~---~~~~----~~~d~  192 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEE----AATYAEVPER---AKAW----GGLDL  192 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSE----EEEGGGHHHH---HHHT----TSEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCE----EEECCcchhH---HHHh----cCceE
Confidence            5789999999999999999999899999999999888766554 344221    2455441222   2222    47999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +++ +|
T Consensus       193 vid-~g  197 (302)
T 1iz0_A          193 VLE-VR  197 (302)
T ss_dssp             EEE-CS
T ss_pred             EEE-CC
Confidence            998 75

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.49  E-value=0.0012  Score=56.49  Aligned_cols=82  Identities=15%  Similarity=0.147  Sum_probs=57.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|++++|.|+ |++|...++.....|++ |+++++++++.+.+.+ + ...+..+..|-.+.+++.+.+.+.-. -.++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~D  254 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-CPEVVTHKVERLSAEESAKKIVESFG-GIEPA  254 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-CTTCEEEECCSCCHHHHHHHHHHHTS-SCCCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-chhcccccccccchHHHHHHHHHHhC-CCCCC
Confidence            5788999998 99999999888889997 8888888877665554 3 34455555565556655444443211 13699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      +++.+.|
T Consensus       255 vvid~~g  261 (363)
T 3m6i_A          255 VALECTG  261 (363)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.48  E-value=8.1e-05  Score=55.12  Aligned_cols=68  Identities=19%  Similarity=0.301  Sum_probs=51.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +++++|.|+ |++|+.+++.|.+.|.+|.+++|+++..+++.++++   ....  +..+.   +++++       ..|++
T Consensus        21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~---~~~~--~~~~~---~~~~~-------~~Div   84 (144)
T 3oj0_A           21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYE---YEYV--LINDI---DSLIK-------NNDVI   84 (144)
T ss_dssp             CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHT---CEEE--ECSCH---HHHHH-------TCSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhC---CceE--eecCH---HHHhc-------CCCEE
Confidence            789999997 999999999999999999999999988888777765   1111  22332   22222       67999


Q ss_pred             EEcC
Q 025252          106 VNSG  109 (255)
Q Consensus       106 i~~a  109 (255)
                      |++.
T Consensus        85 i~at   88 (144)
T 3oj0_A           85 ITAT   88 (144)
T ss_dssp             EECS
T ss_pred             EEeC
Confidence            9864

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.47  E-value=0.00039  Score=59.05  Aligned_cols=76  Identities=22%  Similarity=0.302  Sum_probs=54.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ +++|..+++.+...|++|+++++++++.+.+. +++..    ..+|.++.+ +.+.+.+.   .+++|+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~----~~~d~~~~~-~~~~~~~~---~~~~d~  233 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGAD----LVVNPLKED-AAKFMKEK---VGGVHA  233 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCS----EEECTTTSC-HHHHHHHH---HSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCC----EEecCCCcc-HHHHHHHH---hCCCCE
Confidence            4789999999 78999999999999999999999887766554 34422    124666432 22223322   258999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       234 vid~~g  239 (339)
T 1rjw_A          234 AVVTAV  239 (339)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.43  E-value=0.00038  Score=59.21  Aligned_cols=76  Identities=22%  Similarity=0.324  Sum_probs=51.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|...++.+...|++|+++ +++++.+.+ .+++.   ..  +| .+. +..+.+.+... ..++|+
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lGa---~~--i~-~~~-~~~~~~~~~~~-~~g~D~  219 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLGA---TP--ID-ASR-EPEDYAAEHTA-GQGFDL  219 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHTS---EE--EE-TTS-CHHHHHHHHHT-TSCEEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcCC---CE--ec-cCC-CHHHHHHHHhc-CCCceE
Confidence            57899999999999999999999999999998 666655444 44442   22  44 332 23333332211 136999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +++++|
T Consensus       220 vid~~g  225 (343)
T 3gaz_A          220 VYDTLG  225 (343)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.42  E-value=0.00089  Score=56.03  Aligned_cols=109  Identities=14%  Similarity=0.050  Sum_probs=67.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEec--CcchHHHHHHHhC-----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADV--QDNLGQALADKLG-----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r--~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++||||+|.+|.+++..|+..|.  ++++.++  ++++++.....+.     ..++.+.. |  +.+           .
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~-----------a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYE-----------D   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHH-----------H
Confidence            599999999999999999998875  7888888  6544322221111     01222222 2  111           1


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      +.+.|++|+.|+.....      ..+.+   ..+..|+.....+++.+.++   ...+.|+++|
T Consensus        68 ~~~aDvVi~~ag~~~~~------g~~r~---dl~~~N~~i~~~i~~~i~~~---~p~~~viv~S  119 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP------GQTRI---DLAGDNAPIMEDIQSSLDEH---NDDYISLTTS  119 (303)
T ss_dssp             GTTCSEEEECCCCCCCT------TCCHH---HHHHHHHHHHHHHHHHHHTT---CSCCEEEECC
T ss_pred             hCCCCEEEEcCCCCCCC------CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEeC
Confidence            23789999987654311      12333   34788888887777777653   3456666655

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.41  E-value=0.00035  Score=57.57  Aligned_cols=72  Identities=25%  Similarity=0.336  Sum_probs=55.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++.+|+++|+|+ ||+|++++..|++.|. +|++++|+.++.+++.+++....+..+.  ..+   +.       +  .
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~--~~~---l~-------~--~  180 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISR--YEA---LE-------G--Q  180 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEEC--SGG---GT-------T--C
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEee--HHH---hc-------c--c
Confidence            4578999999998 6999999999999995 9999999999988888887642233332  211   11       0  3


Q ss_pred             CccEEEEc
Q 025252          101 KLDILVNS  108 (255)
Q Consensus       101 ~id~li~~  108 (255)
                      ..|++||+
T Consensus       181 ~~DivIna  188 (272)
T 3pwz_A          181 SFDIVVNA  188 (272)
T ss_dssp             CCSEEEEC
T ss_pred             CCCEEEEC
Confidence            68999996

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.40  E-value=0.0008  Score=57.23  Aligned_cols=77  Identities=19%  Similarity=0.312  Sum_probs=53.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|...++.+...|++|+++++++++.+.+.+ ++...+    .|..+  ++.+.+.+.  ..+++|+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~-lGa~~v----i~~~~--~~~~~~~~~--~~~g~Dv  220 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK-MGADIV----LNHKE--SLLNQFKTQ--GIELVDY  220 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH-HTCSEE----ECTTS--CHHHHHHHH--TCCCEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-cCCcEE----EECCc--cHHHHHHHh--CCCCccE
Confidence            58899999999999999999998899999999998877665554 443211    23332  222323332  2247999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++++++
T Consensus       221 v~d~~g  226 (346)
T 3fbg_A          221 VFCTFN  226 (346)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999654

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.37  E-value=0.00069  Score=58.17  Aligned_cols=74  Identities=18%  Similarity=0.270  Sum_probs=55.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+.++++..    ...|..+.+.+++       ..+++|+
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~----~v~~~~~~~~~~~-------~~~~~D~  254 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGAD----SFLVSRDQEQMQA-------AAGTLDG  254 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCS----EEEETTCHHHHHH-------TTTCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCc----eEEeccCHHHHHH-------hhCCCCE
Confidence            6889999996 99999999999889999999999988777666555432    1246666543322       2357999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++++
T Consensus       255 vid~~g  260 (366)
T 1yqd_A          255 IIDTVS  260 (366)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999754

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.36  E-value=0.0014  Score=55.16  Aligned_cols=110  Identities=15%  Similarity=0.179  Sum_probs=68.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC----ceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ----DVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.|+|++|.+|..++..|+..|  .+|++.++++  .+.....+.+.    ++..+..    ..+.++++       .+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYLG----PEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEES----GGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEecC----CCCHHHHh-------CC
Confidence            58999999999999999999888  7899999987  22233333321    1111100    11222222       26


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .|++|+.++.....      ..+..+   .+..|+.....+.+.+.++   .+.++++++|
T Consensus        69 aDvVvi~ag~~~~~------g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~viv~s  117 (314)
T 1mld_A           69 CDVVVIPAGVPRKP------GMTRDD---LFNTNATIVATLTAACAQH---CPDAMICIIS  117 (314)
T ss_dssp             CSEEEECCSCCCCT------TCCGGG---GHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCEEEECCCcCCCC------CCcHHH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEEC
Confidence            89999987654321      122222   3566777666666666654   2567888877

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.28  E-value=0.00091  Score=54.33  Aligned_cols=80  Identities=19%  Similarity=0.349  Sum_probs=56.1

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCc-------------------chHHHHHHHhC----CCce
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQD-------------------NLGQALADKLG----HQDV   75 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~-------------------~~~~~~~~~~~----~~~~   75 (255)
                      .+.++++++++|.|+ ||+|.++++.|++.|. ++.+++++.                   .+.+.+.+.+.    .-++
T Consensus        25 ~q~~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v  103 (249)
T 1jw9_B           25 GQEALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAI  103 (249)
T ss_dssp             HHHHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HHHHHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEE
Confidence            345688999999997 7999999999999996 899999886                   55555544432    2245


Q ss_pred             EEEEeeCCCHHHHHHHHHHHHHHcCCccEEEEc
Q 025252           76 CYIHCDVSNEREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        76 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      ..+..++++ +.++++++       +.|++|.+
T Consensus       104 ~~~~~~~~~-~~~~~~~~-------~~DvVi~~  128 (249)
T 1jw9_B          104 TPVNALLDD-AELAALIA-------EHDLVLDC  128 (249)
T ss_dssp             EEECSCCCH-HHHHHHHH-------TSSEEEEC
T ss_pred             EEEeccCCH-hHHHHHHh-------CCCEEEEe
Confidence            555555653 34443332       68999984

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.24  E-value=0.00042  Score=57.39  Aligned_cols=49  Identities=12%  Similarity=0.248  Sum_probs=43.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .++++|+++|+|+ ||+|++++..|++.|. +|.++.|+.++.+++.+++.
T Consensus       122 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~  171 (281)
T 3o8q_A          122 VLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVA  171 (281)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHG
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhh
Confidence            4578999999998 6999999999999996 99999999988888887765

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.20  E-value=0.003  Score=53.76  Aligned_cols=80  Identities=14%  Similarity=0.137  Sum_probs=51.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHH-HcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVA-KFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+. +++..  .  ..|.++ .+..+++.+.... .-+++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~--~--~~~~~~~~~~~~~i~~~~~~~~g~g~  241 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGAD--V--TLVVDPAKEEESSIIERIRSAIGDLP  241 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCS--E--EEECCTTTSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCC--E--EEcCcccccHHHHHHHHhccccCCCC
Confidence            5789999997 89999999988889999999998877665544 44432  1  234443 2222222221110 01369


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++++.+
T Consensus       242 D~vid~~g  249 (352)
T 1e3j_A          242 NVTIDCSG  249 (352)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999654

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.19  E-value=0.0022  Score=55.02  Aligned_cols=78  Identities=15%  Similarity=0.292  Sum_probs=52.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...    ..|.++ .+++.+.+.++..  +++
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~----vi~~~~~~~~~~~~~~~~~~--~g~  263 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATD----FVNPNDHSEPISQVLSKMTN--GGV  263 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCE----EECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCce----EEeccccchhHHHHHHHHhC--CCC
Confidence            4788999996 8999999998888998 8999998888766554 444221    134432 1223333333322  479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|++.+
T Consensus       264 D~vid~~g  271 (374)
T 1cdo_A          264 DFSLECVG  271 (374)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.19  E-value=0.0011  Score=57.66  Aligned_cols=71  Identities=20%  Similarity=0.382  Sum_probs=53.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.+++++|.|+ |++|+.+++.+...|. +|++++|+.++.+++.++++.   ..  .+.   +++.+.+       ..
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~g~---~~--~~~---~~l~~~l-------~~  227 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---EA--VRF---DELVDHL-------AR  227 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---EE--CCG---GGHHHHH-------HT
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCC---ce--ecH---HhHHHHh-------cC
Confidence            368999999998 9999999999999998 999999998877677666642   11  222   2333332       26


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      .|++|++.
T Consensus       228 aDvVi~at  235 (404)
T 1gpj_A          228 SDVVVSAT  235 (404)
T ss_dssp             CSEEEECC
T ss_pred             CCEEEEcc
Confidence            89999864

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.14  E-value=0.0016  Score=56.02  Aligned_cols=75  Identities=20%  Similarity=0.315  Sum_probs=50.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|...++.+...|++|+++++ +++.+. ..+++...    ..|.++.+-    .+++.+ .+++|+
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~-~~~lGa~~----v~~~~~~~~----~~~~~~-~~g~D~  251 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL-VRKLGADD----VIDYKSGSV----EEQLKS-LKPFDF  251 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH-HHHTTCSE----EEETTSSCH----HHHHHT-SCCBSE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH-HHHcCCCE----EEECCchHH----HHHHhh-cCCCCE
Confidence            5789999999999999999988889999988884 444433 45554321    135444322    222322 257999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|+++|
T Consensus       252 vid~~g  257 (375)
T 2vn8_A          252 ILDNVG  257 (375)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            999865

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.13  E-value=0.00012  Score=60.50  Aligned_cols=44  Identities=14%  Similarity=0.116  Sum_probs=38.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALA   67 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~   67 (255)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|.++.|+.++.+++.
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la  158 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS  158 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence            467899999998 7999999999999998 8999999987655443

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.12  E-value=0.00069  Score=54.28  Aligned_cols=69  Identities=13%  Similarity=0.173  Sum_probs=53.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+++.     ..+.++.+|.++++.++++      ...+.|.+
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----SGANFVHGDPTRVSDLEKA------NVRGARAV   75 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----TTCEEEESCTTCHHHHHHT------TCTTCSEE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----cCCeEEEcCCCCHHHHHhc------CcchhcEE
Confidence            346889998 8999999999999999 999999887765554     2477899999999876554      11356888


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |.
T Consensus        76 i~   77 (234)
T 2aef_A           76 IV   77 (234)
T ss_dssp             EE
T ss_pred             EE
Confidence            76

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.06  E-value=0.00078  Score=57.31  Aligned_cols=113  Identities=17%  Similarity=0.128  Sum_probs=66.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      |+++++.|+|++|.+|..++..++..|  .+|++.|.++++.+.....+.+     .++.+ .   ++.   .+.+    
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~-t---~d~---~~al----   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF-T---SDI---KEAL----   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE-E---SCH---HHHH----
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE-c---CCH---HHHh----
Confidence            567789999999999999999999988  4899999987655443322221     11111 1   122   1212    


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCc-EEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGC-ILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~-ii~is  162 (255)
                         .+-|++|..||....+      ..+..   +.++.|..-...+.+.+.++   .+.+. ++++|
T Consensus        75 ---~dADvVvitaG~p~kp------G~~R~---dLl~~N~~I~~~i~~~i~~~---~p~a~~vlvvs  126 (343)
T 3fi9_A           75 ---TDAKYIVSSGGAPRKE------GMTRE---DLLKGNAEIAAQLGKDIKSY---CPDCKHVIIIF  126 (343)
T ss_dssp             ---TTEEEEEECCC-------------CHH---HHHHHHHHHHHHHHHHHHHH---CTTCCEEEECS
T ss_pred             ---CCCCEEEEccCCCCCC------CCCHH---HHHHHHHHHHHHHHHHHHHh---ccCcEEEEEec
Confidence               2679999987654211      12332   34556666655555555544   24564 67777

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.05  E-value=0.011  Score=50.27  Aligned_cols=78  Identities=18%  Similarity=0.299  Sum_probs=51.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCC--CHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVS--NEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~g~  101 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++..  ..  .|..  +.++..+.+.+...  ++
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~--~v--i~~~~~~~~~~~~~i~~~~~--~g  242 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGAD--LV--LQISKESPQEIARKVEGQLG--CK  242 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCS--EE--EECSSCCHHHHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCC--EE--EcCcccccchHHHHHHHHhC--CC
Confidence            4788999996 8999999888888898 8999998877665544 45432  12  3444  22333222222211  47


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|.+.+
T Consensus       243 ~D~vid~~g  251 (356)
T 1pl8_A          243 PEVTIECTG  251 (356)
T ss_dssp             CSEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999654

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.98  E-value=0.00097  Score=56.54  Aligned_cols=113  Identities=14%  Similarity=0.104  Sum_probs=65.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC--E-----EEEEecCcc--hHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA--K-----VVIADVQDN--LGQALADKLGH---QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~--~-----v~~~~r~~~--~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      +++.||||+|.+|..++..|+..|.  +     +++.++++.  ..+-...++.+   .....+..  +  .+..+    
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~~--~--~~~~~----   75 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIA--T--DKEEI----   75 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEE--E--SCHHH----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEEE--c--CCcHH----
Confidence            5699999999999999999998774  4     899998752  22222222221   11111111  1  11111    


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-cEEEec
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-CILYTT  162 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~is  162 (255)
                         .+.+-|++|+.||....+      ..+.   .+.++.|+.....+.+.+.++   ..++ +++++|
T Consensus        76 ---~~~daDvVvitAg~prkp------G~tR---~dll~~N~~i~~~i~~~i~~~---~~~~~~vivvs  129 (333)
T 5mdh_A           76 ---AFKDLDVAILVGSMPRRD------GMER---KDLLKANVKIFKCQGAALDKY---AKKSVKVIVVG  129 (333)
T ss_dssp             ---HTTTCSEEEECCSCCCCT------TCCT---TTTHHHHHHHHHHHHHHHHHH---SCTTCEEEECS
T ss_pred             ---HhCCCCEEEEeCCCCCCC------CCCH---HHHHHHHHHHHHHHHHHHHHh---CCCCeEEEEcC
Confidence               123689999987654321      1222   234566777766666666544   2345 477777

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.00089  Score=56.44  Aligned_cols=74  Identities=18%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+. +++...+    +|.++.+  .+.++++.  .+++|++++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~----i~~~~~~--~~~~~~~~--~~~~d~vid  222 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEV----LAREDVM--AERIRPLD--KQRWAAAVD  222 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEE----EECC-----------CC--SCCEEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEE----EecCCcH--HHHHHHhc--CCcccEEEE
Confidence            6999999999999999988889999999999877766554 4543221    3544432  22222221  146999999


Q ss_pred             cCC
Q 025252          108 SGC  110 (255)
Q Consensus       108 ~a~  110 (255)
                      ++|
T Consensus       223 ~~g  225 (328)
T 1xa0_A          223 PVG  225 (328)
T ss_dssp             CST
T ss_pred             CCc
Confidence            754

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.93  E-value=0.0067  Score=50.33  Aligned_cols=89  Identities=16%  Similarity=0.280  Sum_probs=59.3

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCc------------------chHHHHHHH---hC-CCce
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQD------------------NLGQALADK---LG-HQDV   75 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~------------------~~~~~~~~~---~~-~~~~   75 (255)
                      ..+-++++++++|.|+ ||+|..+++.|+..| .++.++|.+.                  .+.+.+.+.   ++ .-++
T Consensus        29 ~~q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v  107 (292)
T 3h8v_A           29 SDYEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLF  107 (292)
T ss_dssp             ---CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEE
T ss_pred             HHHHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEE
Confidence            4556788999999998 789999999999999 4788887764                  232222222   22 2356


Q ss_pred             EEEEeeCCCHHHHHHHHHHHHHH----cCCccEEEEc
Q 025252           76 CYIHCDVSNEREVINLVDTTVAK----FGKLDILVNS  108 (255)
Q Consensus        76 ~~~~~D~~~~~~~~~~~~~~~~~----~g~id~li~~  108 (255)
                      ..+..++++.+.++++++.+...    ..+.|++|.+
T Consensus       108 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~  144 (292)
T 3h8v_A          108 EVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSC  144 (292)
T ss_dssp             EEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEEC
T ss_pred             EEecccCCcHHHHHHHhhhhcccccccCCCCCEEEEC
Confidence            66777887777777666544221    1368998873

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=96.92  E-value=0.0032  Score=53.86  Aligned_cols=78  Identities=15%  Similarity=0.201  Sum_probs=53.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+| +|++|...++.+...|++|+++++++++.+.+ .+++...    ..| .+.+++.+.+.+... ..++|+
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~----vi~-~~~~~~~~~v~~~~~-g~g~D~  260 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADH----GIN-RLEEDWVERVYALTG-DRGADH  260 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSE----EEE-TTTSCHHHHHHHHHT-TCCEEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCE----EEc-CCcccHHHHHHHHhC-CCCceE
Confidence            578999999 89999999998888999999999988776654 4444321    134 333333333333221 126999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +++++|
T Consensus       261 vid~~g  266 (363)
T 3uog_A          261 ILEIAG  266 (363)
T ss_dssp             EEEETT
T ss_pred             EEECCC
Confidence            999765

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=96.92  E-value=0.075  Score=43.61  Aligned_cols=42  Identities=17%  Similarity=0.151  Sum_probs=35.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      +++.|.|+ |.+|.++|..|++.|++|++.+++++..++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            56778876 7899999999999999999999998876665543

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=96.89  E-value=0.0016  Score=55.46  Aligned_cols=76  Identities=20%  Similarity=0.302  Sum_probs=52.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...    ..|.++.+ +   .+++.+..  .+
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~----~~~~~~~~-~---~~~v~~~~~g~g  236 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADY----VINPFEED-V---VKEVMDITDGNG  236 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSE----EECTTTSC-H---HHHHHHHTTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCE----EECCCCcC-H---HHHHHHHcCCCC
Confidence            6889999999 9999999999988999 9999999877665544 444221    13544422 2   22333322  26


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|++++
T Consensus       237 ~D~vid~~g  245 (348)
T 2d8a_A          237 VDVFLEFSG  245 (348)
T ss_dssp             EEEEEECSC
T ss_pred             CCEEEECCC
Confidence            999999754

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.86  E-value=0.002  Score=57.10  Aligned_cols=72  Identities=21%  Similarity=0.254  Sum_probs=59.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .++++|.|+ |.+|+.+|+.|.++|++|++++++++..+++.+++   .+..+.+|.++++-++++=      ...-|++
T Consensus         3 ~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---~~~~i~Gd~~~~~~L~~Ag------i~~ad~~   72 (461)
T 4g65_A            3 AMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---DLRVVNGHASHPDVLHEAG------AQDADML   72 (461)
T ss_dssp             CEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---SCEEEESCTTCHHHHHHHT------TTTCSEE
T ss_pred             cCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---CcEEEEEcCCCHHHHHhcC------CCcCCEE
Confidence            456999998 67999999999999999999999999888887765   4678899999999887651      1256777


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |-
T Consensus        73 ia   74 (461)
T 4g65_A           73 VA   74 (461)
T ss_dssp             EE
T ss_pred             EE
Confidence            74

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.86  E-value=0.0035  Score=53.51  Aligned_cols=74  Identities=18%  Similarity=0.228  Sum_probs=53.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+.++++...+    .|..+.+.++       +..+++|+
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v----i~~~~~~~~~-------~~~~g~D~  247 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDY----VIGSDQAKMS-------ELADSLDY  247 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCE----EETTCHHHHH-------HSTTTEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCcee----eccccHHHHH-------HhcCCCCE
Confidence            6789999995 9999999988888899999999988877666645553322    3445543222       22257999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.+
T Consensus       248 vid~~g  253 (357)
T 2cf5_A          248 VIDTVP  253 (357)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            999754

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.82  E-value=0.0043  Score=52.45  Aligned_cols=76  Identities=18%  Similarity=0.262  Sum_probs=52.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+ .+++...    ..|..+.+..+    .+.+..+++|+
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~----~i~~~~~~~~~----~~~~~~g~~d~  235 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEV----AVNARDTDPAA----WLQKEIGGAHG  235 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSE----EEETTTSCHHH----HHHHHHSSEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCE----EEeCCCcCHHH----HHHHhCCCCCE
Confidence            5788999997 8999999988888999999999988776644 4444321    23544433222    22223468999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+++
T Consensus       236 vid~~g  241 (340)
T 3s2e_A          236 VLVTAV  241 (340)
T ss_dssp             EEESSC
T ss_pred             EEEeCC
Confidence            998643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.78  E-value=0.0022  Score=56.02  Aligned_cols=60  Identities=18%  Similarity=0.182  Sum_probs=47.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   91 (255)
                      +.++|.|. |.+|+.+++.|.+.|.+|++++++++..+++.+.    .+.++.+|.++++.++++
T Consensus         5 ~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----g~~vi~GDat~~~~L~~a   64 (413)
T 3l9w_A            5 MRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----GMKVFYGDATRMDLLESA   64 (413)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----TCCCEESCTTCHHHHHHT
T ss_pred             CeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----CCeEEEcCCCCHHHHHhc
Confidence            45899997 7799999999999999999999998887766542    455677777777765443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.77  E-value=0.0015  Score=54.77  Aligned_cols=82  Identities=18%  Similarity=0.167  Sum_probs=54.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++.+|+++|.|++.-+|+.+++.|+..|++|.+++|+.....+..+++............++++++++.+.       .
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~-------~  245 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSL-------D  245 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhc-------c
Confidence            468999999999988889999999999999999998874432222222221111111222245567777666       4


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      -|++|.+.+
T Consensus       246 ADIVIsAtg  254 (320)
T 1edz_A          246 SDVVITGVP  254 (320)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            599998644

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.75  E-value=0.0061  Score=52.01  Aligned_cols=38  Identities=21%  Similarity=0.153  Sum_probs=32.8

Q ss_pred             cC-eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           25 QG-RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        25 ~~-k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .| ++++|+|++|++|...++.....|++|+++.++.+.
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            46 899999999999999988888889999988876554

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.74  E-value=0.0066  Score=52.06  Aligned_cols=73  Identities=23%  Similarity=0.366  Sum_probs=52.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+|+ |++|...++.+...|++|+++++++++.+.+.+ ++...    ..|..+.+.++    ++.   +++|+
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~-lGa~~----vi~~~~~~~~~----~~~---~g~Dv  260 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADE----VVNSRNADEMA----AHL---KSFDF  260 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-HTCSE----EEETTCHHHHH----TTT---TCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-cCCcE----EeccccHHHHH----Hhh---cCCCE
Confidence            4788999998 889999998888899999999998887765553 54321    24555554322    221   47999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|++.+
T Consensus       261 vid~~g  266 (369)
T 1uuf_A          261 ILNTVA  266 (369)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999754

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.74  E-value=0.0081  Score=52.20  Aligned_cols=43  Identities=16%  Similarity=0.207  Sum_probs=38.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++....+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            478999999997 8999999999999999999999998877665

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.73  E-value=0.013  Score=49.51  Aligned_cols=111  Identities=17%  Similarity=0.084  Sum_probs=68.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      +.+++.|+|+ |.+|.+++..|+..|.  ++++.++++++.+.....+.+      ..+.....|   .+          
T Consensus         4 ~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~~----------   69 (326)
T 3pqe_A            4 HVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---YE----------   69 (326)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---GG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---HH----------
Confidence            3567999996 9999999999999986  899999987765543322221      133333222   11          


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                       ....-|++|..+|....+      ..+..   +.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        70 -a~~~aDvVvi~ag~p~kp------G~~R~---dL~~~N~~Iv~~i~~~I~~~---~p~a~vlvvt  122 (326)
T 3pqe_A           70 -DCKDADIVCICAGANQKP------GETRL---ELVEKNLKIFKGIVSEVMAS---GFDGIFLVAT  122 (326)
T ss_dssp             -GGTTCSEEEECCSCCCCT------TCCHH---HHHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             -HhCCCCEEEEecccCCCC------CccHH---HHHHHHHHHHHHHHHHHHHh---cCCeEEEEcC
Confidence             123679999987653211      12333   33556665555555555543   3567788877

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.72  E-value=0.0099  Score=50.13  Aligned_cols=114  Identities=15%  Similarity=0.096  Sum_probs=63.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      ++.+++++.|+|+ |.+|.+++..|+..|.  ++++.++++++.+-....+.+     ..+.....   +.+        
T Consensus         5 ~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~~--------   72 (326)
T 3vku_A            5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EYS--------   72 (326)
T ss_dssp             --CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CGG--------
T ss_pred             ccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cHH--------
Confidence            3456778999996 9999999999999886  899999987765544433332     12222221   111        


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                         .+.+-|++|..||....++      .+.   .+.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        73 ---a~~~aDiVvi~ag~~~kpG------~tR---~dL~~~N~~I~~~i~~~i~~~---~p~a~ilvvt  125 (326)
T 3vku_A           73 ---DAKDADLVVITAGAPQKPG------ETR---LDLVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             ---GGTTCSEEEECCCCC-------------------------CHHHHHHHHHTT---TCCSEEEECS
T ss_pred             ---HhcCCCEEEECCCCCCCCC------chH---HHHHHHHHHHHHHHHHHHHhc---CCceEEEEcc
Confidence               1246799999876543111      122   234555665554555555432   3567777777

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.70  E-value=0.0086  Score=51.50  Aligned_cols=77  Identities=16%  Similarity=0.211  Sum_probs=52.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCC--CHHHHHHHHHHHHHHc-C
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVS--NEREVINLVDTTVAKF-G  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~-g  100 (255)
                      .+++++|+| +|++|...++.+...| .+|+++++++++.+.+. +++...  +  .|..  +.+++.+   ++.+.. +
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~--v--i~~~~~~~~~~~~---~v~~~~~g  265 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADL--T--LNRRETSVEERRK---AIMDITHG  265 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSE--E--EETTTSCHHHHHH---HHHHHTTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HcCCcE--E--EeccccCcchHHH---HHHHHhCC
Confidence            478999999 8999999999888899 59999999887765554 454321  1  2433  1334333   333333 2


Q ss_pred             -CccEEEEcCC
Q 025252          101 -KLDILVNSGC  110 (255)
Q Consensus       101 -~id~li~~a~  110 (255)
                       ++|++|++.+
T Consensus       266 ~g~Dvvid~~g  276 (380)
T 1vj0_A          266 RGADFILEATG  276 (380)
T ss_dssp             SCEEEEEECSS
T ss_pred             CCCcEEEECCC
Confidence             6999999754

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.68  E-value=0.0068  Score=51.73  Aligned_cols=76  Identities=24%  Similarity=0.319  Sum_probs=52.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC-Cc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG-KL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~i  102 (255)
                      .+++++|+|+ |++|...++..... |++|+++++++++.+.+. +++...+    .|.++.  +.+.++++.  .+ ++
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v----i~~~~~--~~~~v~~~~--~g~g~  255 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHV----VDARRD--PVKQVMELT--RGRGV  255 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEE----EETTSC--HHHHHHHHT--TTCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEE----Eeccch--HHHHHHHHh--CCCCC
Confidence            5789999999 89999998888778 999999999877665554 4543221    355443  333333321  13 69


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus       256 Dvvid~~G  263 (359)
T 1h2b_A          256 NVAMDFVG  263 (359)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999754

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.66  E-value=0.0029  Score=49.60  Aligned_cols=42  Identities=19%  Similarity=0.342  Sum_probs=36.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      ++.|+|++|.+|.++++.|++.|++|.+.+|+++..+++.++
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~   43 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAE   43 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence            588999999999999999999999999999998776665543

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.66  E-value=0.0034  Score=53.64  Aligned_cols=74  Identities=18%  Similarity=0.288  Sum_probs=51.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+.+ ++...  +  .|..+..+   ..+++.   +++|+
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~-lGa~~--v--~~~~~~~~---~~~~~~---~~~D~  246 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADH--Y--IATLEEGD---WGEKYF---DTFDL  246 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH-HTCSE--E--EEGGGTSC---HHHHSC---SCEEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH-cCCCE--E--EcCcCchH---HHHHhh---cCCCE
Confidence            5789999999 999999998888899999999998887665544 44322  1  24333201   122221   58999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      +|.+.+
T Consensus       247 vid~~g  252 (360)
T 1piw_A          247 IVVCAS  252 (360)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            999754

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.64  E-value=0.0017  Score=53.61  Aligned_cols=47  Identities=11%  Similarity=0.258  Sum_probs=40.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADK   69 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~   69 (255)
                      .++.+|+++|.|+ ||.|++++..|.+.|. +|.++.|+.++.+++.++
T Consensus       118 ~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~  165 (282)
T 3fbt_A          118 VEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGE  165 (282)
T ss_dssp             CCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTT
T ss_pred             CCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHh
Confidence            4578999999998 6999999999999998 899999998877766654

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.63  E-value=0.0054  Score=52.61  Aligned_cols=78  Identities=15%  Similarity=0.259  Sum_probs=51.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...  .  .|.++ .+++.+.+.++.  .+++
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~--v--i~~~~~~~~~~~~~~~~~--~~g~  262 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATE--C--VNPQDYKKPIQEVLTEMS--NGGV  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSE--E--ECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCce--E--ecccccchhHHHHHHHHh--CCCC
Confidence            4788999995 8999999998888998 8999998888766554 444221  1  34432 122333333321  1479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|++.+
T Consensus       263 D~vid~~g  270 (374)
T 2jhf_A          263 DFSFEVIG  270 (374)
T ss_dssp             SEEEECSC
T ss_pred             cEEEECCC
Confidence            99999654

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=96.60  E-value=0.0027  Score=53.85  Aligned_cols=76  Identities=18%  Similarity=0.271  Sum_probs=51.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+.+ + ..    ...|..+. ++.+.+.++.  .+++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l-a~----~v~~~~~~-~~~~~~~~~~--~~g~D  233 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y-AD----RLVNPLEE-DLLEVVRRVT--GSGVE  233 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T-CS----EEECTTTS-CHHHHHHHHH--SSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-HH----hccCcCcc-CHHHHHHHhc--CCCCC
Confidence            6789999999 9999999998888999 89999988765443322 2 11    12354442 2333333332  24799


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|++.+
T Consensus       234 ~vid~~g  240 (343)
T 2dq4_A          234 VLLEFSG  240 (343)
T ss_dssp             EEEECSC
T ss_pred             EEEECCC
Confidence            9999654

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.60  E-value=0.015  Score=49.81  Aligned_cols=76  Identities=13%  Similarity=0.148  Sum_probs=51.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id  103 (255)
                      .+++++|.|++|++|...++.....|++|+++. ++++.+ ...+++...    ..|..+.+ +   .+++.+.. +++|
T Consensus       164 ~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~-~~~~lGa~~----vi~~~~~~-~---~~~v~~~t~g~~d  233 (371)
T 3gqv_A          164 KPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD-LAKSRGAEE----VFDYRAPN-L---AQTIRTYTKNNLR  233 (371)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH-HHHHTTCSE----EEETTSTT-H---HHHHHHHTTTCCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH-HHHHcCCcE----EEECCCch-H---HHHHHHHccCCcc
Confidence            678999999999999999999888999998886 555444 555555321    23444433 2   23333332 5699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      +++.+.|
T Consensus       234 ~v~d~~g  240 (371)
T 3gqv_A          234 YALDCIT  240 (371)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9998654

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.60  E-value=0.0043  Score=50.88  Aligned_cols=44  Identities=23%  Similarity=0.278  Sum_probs=40.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. +++
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~  161 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG  161 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC
Confidence            889999997 89999999999999999999999999888887 654

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.56  E-value=0.0058  Score=52.38  Aligned_cols=78  Identities=14%  Similarity=0.222  Sum_probs=51.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...  .  .|.++ .+++.+.++++.  .+++
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~--v--i~~~~~~~~~~~~v~~~~--~~g~  261 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATE--C--INPQDFSKPIQEVLIEMT--DGGV  261 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSE--E--ECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCce--E--eccccccccHHHHHHHHh--CCCC
Confidence            4788999996 8999999988888898 8999998887766554 444321  1  24332 122333333321  1479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++++.+
T Consensus       262 D~vid~~g  269 (373)
T 2fzw_A          262 DYSFECIG  269 (373)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999654

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.56  E-value=0.0073  Score=51.97  Aligned_cols=79  Identities=19%  Similarity=0.299  Sum_probs=52.5

Q ss_pred             cCeEEEEec-CCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITG-GASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtG-as~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+.+++|.| |+|++|...++.+...|++|+++++++++.+.+. +++...+    .|..+.+ +.+.+.+.-.. .++|
T Consensus       170 ~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~----~~~~~~~-~~~~v~~~t~~-~g~d  242 (379)
T 3iup_A          170 EGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHV----CNAASPT-FMQDLTEALVS-TGAT  242 (379)
T ss_dssp             TTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCE----EETTSTT-HHHHHHHHHHH-HCCC
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEE----EeCCChH-HHHHHHHHhcC-CCce
Confidence            577899987 8999999999888889999999998887765554 4543222    3444432 22222222111 2699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      +++.+.|
T Consensus       243 ~v~d~~g  249 (379)
T 3iup_A          243 IAFDATG  249 (379)
T ss_dssp             EEEESCE
T ss_pred             EEEECCC
Confidence            9999754

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.55  E-value=0.035  Score=45.53  Aligned_cols=79  Identities=13%  Similarity=0.152  Sum_probs=52.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHH-cCCEEE-EEecCcch--HHH-----------------HHHHhCCCceEEEEeeC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHK-NGAKVV-IADVQDNL--GQA-----------------LADKLGHQDVCYIHCDV   82 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~-~g~~v~-~~~r~~~~--~~~-----------------~~~~~~~~~~~~~~~D~   82 (255)
                      ++..++.|+|++|.+|+.+++.+.+ .|.+++ +++++++.  ..+                 +.+.+.  .+ =+..|+
T Consensus         3 ~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~--~~-DvVIDf   79 (273)
T 1dih_A            3 DANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKD--DF-DVFIDF   79 (273)
T ss_dssp             CCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTT--SC-SEEEEC
T ss_pred             CCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhc--CC-CEEEEc
Confidence            3445799999999999999999875 467776 45554421  000                 011111  22 245699


Q ss_pred             CCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           83 SNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        83 ~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      +.++...+.++...+.  ++++++-
T Consensus        80 t~p~~~~~~~~~a~~~--G~~vVig  102 (273)
T 1dih_A           80 TRPEGTLNHLAFCRQH--GKGMVIG  102 (273)
T ss_dssp             SCHHHHHHHHHHHHHT--TCEEEEC
T ss_pred             CChHHHHHHHHHHHhC--CCCEEEE
Confidence            9999888888887775  6787774

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.53  E-value=0.0066  Score=51.91  Aligned_cols=76  Identities=21%  Similarity=0.311  Sum_probs=50.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  102 (255)
                      .+++++|+||+|++|...++.+.. .|.+|+++++++++.+.+. +++...+    .|.++  ++   .+++.+.. +++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~v----i~~~~--~~---~~~v~~~~~~g~  240 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHV----IDHSK--PL---AAEVAALGLGAP  240 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEE----ECTTS--CH---HHHHHTTCSCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEE----EeCCC--CH---HHHHHHhcCCCc
Confidence            578899999999999998776655 5899999999887665554 4543221    24332  22   23333322 479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.|
T Consensus       241 Dvvid~~g  248 (363)
T 4dvj_A          241 AFVFSTTH  248 (363)
T ss_dssp             EEEEECSC
T ss_pred             eEEEECCC
Confidence            99998643

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=96.50  E-value=0.02  Score=48.41  Aligned_cols=114  Identities=9%  Similarity=0.078  Sum_probs=70.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ....+++.|+|+ |.+|.+++..++..|.  ++++.++++++.+....++.+.     ....+..  +|++.        
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~~--------   84 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYSV--------   84 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGGG--------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHHH--------
Confidence            456778999998 8999999999999886  8999999877655544333211     1112211  12221        


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                         ...-|++|..||....+      ..+..   +.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        85 ---~~~aDiVvi~aG~~~kp------G~tR~---dL~~~N~~I~~~i~~~i~~~---~p~a~vlvvt  136 (331)
T 4aj2_A           85 ---TANSKLVIITAGARQQE------GESRL---NLVQRNVNIFKFIIPNVVKY---SPQCKLLIVS  136 (331)
T ss_dssp             ---GTTEEEEEECCSCCCCT------TCCGG---GGHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             ---hCCCCEEEEccCCCCCC------CccHH---HHHHHHHHHHHHHHHHHHHH---CCCeEEEEec
Confidence               23679999987754322      22333   34555665555556665554   3567888887

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.49  E-value=0.001  Score=54.17  Aligned_cols=43  Identities=12%  Similarity=0.209  Sum_probs=36.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALAD   68 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~   68 (255)
                      +++ +++|.|+ ||.|++++..|.+.|. +|.+++|+.++.+++.+
T Consensus       107 ~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~  150 (253)
T 3u62_A          107 VKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDF  150 (253)
T ss_dssp             CCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCS
T ss_pred             CCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            467 7999997 8999999999999998 89999999876655444

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=96.47  E-value=0.027  Score=47.42  Aligned_cols=113  Identities=16%  Similarity=0.180  Sum_probs=66.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+....++.+      ........  +|.+          
T Consensus         5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t--~d~~----------   71 (324)
T 3gvi_A            5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGA--NDYA----------   71 (324)
T ss_dssp             -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SSGG----------
T ss_pred             CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEe--CCHH----------
Confidence            45678999998 9999999999999998 999999998765432222211      11121111  1221          


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                       .+..-|++|..++....++      .+..+   .+..|..-...+.+.+.++   .+.+.++++|
T Consensus        72 -a~~~aDiVIiaag~p~k~G------~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~iivvt  124 (324)
T 3gvi_A           72 -AIEGADVVIVTAGVPRKPG------MSRDD---LLGINLKVMEQVGAGIKKY---APEAFVICIT  124 (324)
T ss_dssp             -GGTTCSEEEECCSCCCC-----------CH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             -HHCCCCEEEEccCcCCCCC------CCHHH---HHHhhHHHHHHHHHHHHHH---CCCeEEEecC
Confidence             1236799999876543211      12222   3445555554555555443   3567788777

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.44  E-value=0.01  Score=50.85  Aligned_cols=78  Identities=19%  Similarity=0.286  Sum_probs=51.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+. +++...  .  .|.++ .+++.+.+.++..  +++
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~--v--i~~~~~~~~~~~~v~~~~~--~g~  266 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATD--C--LNPRELDKPVQDVITELTA--GGV  266 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSE--E--ECGGGCSSCHHHHHHHHHT--SCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCcE--E--EccccccchHHHHHHHHhC--CCc
Confidence            4789999996 8999999988888898 8999998888766553 444321  1  34332 1223333333222  479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus       267 Dvvid~~G  274 (376)
T 1e3i_A          267 DYSLDCAG  274 (376)
T ss_dssp             SEEEESSC
T ss_pred             cEEEECCC
Confidence            99999654

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.43  E-value=0.018  Score=48.68  Aligned_cols=76  Identities=14%  Similarity=0.147  Sum_probs=50.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...  |++|+++++++++.+.+. +++...+    .|..+.   ++.++++.+ -.++
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v----i~~~~~---~~~~~~~~~-g~g~  239 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYV----SEMKDA---ESLINKLTD-GLGA  239 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEE----ECHHHH---HHHHHHHHT-TCCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEE----eccccc---hHHHHHhhc-CCCc
Confidence            6889999999 89999999888888  999999998877665554 4442221    232220   122333322 1279


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus       240 D~vid~~g  247 (344)
T 2h6e_A          240 SIAIDLVG  247 (344)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999654

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.41  E-value=0.017  Score=46.66  Aligned_cols=73  Identities=10%  Similarity=0.116  Sum_probs=54.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++.|.|++|.+|+.+++.+.+. +.+++.+....+.+.++...    ... +..|+|.++...+.++...++  ++++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~----~~D-vvIDfT~p~a~~~~~~~a~~~--g~~~Vi   74 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDG----NTE-VVIDFTHPDVVMGNLEFLIDN--GIHAVV   74 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHT----TCC-EEEECSCTTTHHHHHHHHHHT--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhcc----CCc-EEEEccChHHHHHHHHHHHHc--CCCEEE
Confidence            5899999999999999999865 88987654444444444331    122 678999999988888877665  788888


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      -
T Consensus        75 g   75 (245)
T 1p9l_A           75 G   75 (245)
T ss_dssp             C
T ss_pred             c
Confidence            5

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.40  E-value=0.0055  Score=52.04  Aligned_cols=68  Identities=18%  Similarity=0.285  Sum_probs=49.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|+ |++|...++.+...|++|+++++++++.+.+. +++...+.      ++.+.++          .++|+
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~------~~~~~~~----------~~~D~  237 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFY------TDPKQCK----------EELDF  237 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTCSEEE------SSGGGCC----------SCEEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCeec------CCHHHHh----------cCCCE
Confidence            5889999997 89999999888889999999999888776554 45433222      3333221          17999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.+
T Consensus       238 vid~~g  243 (348)
T 3two_A          238 IISTIP  243 (348)
T ss_dssp             EEECCC
T ss_pred             EEECCC
Confidence            998754

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.39  E-value=0.0063  Score=51.85  Aligned_cols=73  Identities=18%  Similarity=0.317  Sum_probs=49.8

Q ss_pred             CeEEEEecCCChHHHHH-HHHH-HHcCCE-EEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           26 GRVAIITGGASGIGASA-AQLF-HKNGAK-VVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        26 ~k~~lVtGas~giG~ai-a~~l-~~~g~~-v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++++|+|+ |++|... ++.+ ...|++ |++++++++   +.+.+ .+++   ...+  |..+. ++.+ +.++   .
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lG---a~~v--~~~~~-~~~~-i~~~---~  240 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELD---ATYV--DSRQT-PVED-VPDV---Y  240 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTT---CEEE--ETTTS-CGGG-HHHH---S
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcC---Cccc--CCCcc-CHHH-HHHh---C
Confidence            389999999 9999998 7766 567987 999999877   65554 4444   2333  55442 2333 3333   2


Q ss_pred             CCccEEEEcCC
Q 025252          100 GKLDILVNSGC  110 (255)
Q Consensus       100 g~id~li~~a~  110 (255)
                      +++|++|.+.+
T Consensus       241 gg~Dvvid~~g  251 (357)
T 2b5w_A          241 EQMDFIYEATG  251 (357)
T ss_dssp             CCEEEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999998654

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.38  E-value=0.038  Score=46.28  Aligned_cols=115  Identities=19%  Similarity=0.183  Sum_probs=69.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC--cchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ--DNLGQALADKLGH------QDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~--~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~   92 (255)
                      |.++.+++.|+|+ |.+|.+++..++..|. +|++.+++  ++..+....++.+      ........  ++.       
T Consensus         4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~-------   73 (315)
T 3tl2_A            4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY-------   73 (315)
T ss_dssp             CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG-------
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH-------
Confidence            4456778999997 9999999999999998 99999998  3333222211110      01111111  111       


Q ss_pred             HHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           93 DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        93 ~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                          +.+.+-|++|..+|....+      ..+..   +.++.|..-.-.+.+.+.++   .+.+.++++|
T Consensus        74 ----~a~~~aDvVIiaag~p~kp------g~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vlvvs  127 (315)
T 3tl2_A           74 ----ADTADSDVVVITAGIARKP------GMSRD---DLVATNSKIMKSITRDIAKH---SPNAIIVVLT  127 (315)
T ss_dssp             ----GGGTTCSEEEECCSCCCCT------TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             ----HHhCCCCEEEEeCCCCCCC------CCCHH---HHHHHHHHHHHHHHHHHHHh---CCCeEEEECC
Confidence                1224789999987654321      23333   34556665555555555544   3567788877

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.33  E-value=0.0094  Score=51.05  Aligned_cols=78  Identities=17%  Similarity=0.267  Sum_probs=50.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.....|+ +|+++++++++.+.+. +++...  .  .|..+ .+++.+.+.++.  .+++
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~--v--i~~~~~~~~~~~~i~~~t--~gg~  262 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATE--C--LNPKDYDKPIYEVICEKT--NGGV  262 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSE--E--ECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCcE--E--EecccccchHHHHHHHHh--CCCC
Confidence            4788999996 8999999888877898 8999998887765544 454321  1  23332 112333233221  1479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus       263 Dvvid~~g  270 (373)
T 1p0f_A          263 DYAVECAG  270 (373)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99998654

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.32  E-value=0.0064  Score=50.98  Aligned_cols=73  Identities=25%  Similarity=0.370  Sum_probs=49.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+||+|++|...++.+...|++|+++++.+ + .+...+++...    ..|..+.+.+.+       ...++|+
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~-~~~~~~lGa~~----~i~~~~~~~~~~-------~~~g~D~  218 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-N-HAFLKALGAEQ----CINYHEEDFLLA-------ISTPVDA  218 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-H-HHHHHHHTCSE----EEETTTSCHHHH-------CCSCEEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-h-HHHHHHcCCCE----EEeCCCcchhhh-------hccCCCE
Confidence            578999999999999999999988999999887543 3 34455555332    234444332221       1247999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.|
T Consensus       219 v~d~~g  224 (321)
T 3tqh_A          219 VIDLVG  224 (321)
T ss_dssp             EEESSC
T ss_pred             EEECCC
Confidence            998643

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=96.31  E-value=0.051  Score=45.65  Aligned_cols=113  Identities=16%  Similarity=0.174  Sum_probs=69.3

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCC------ceEEEEeeCCCHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQ------DVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      |+.+++.|+|+ |.+|.+++..|+..|. +|++.++++++.+....++.+.      .......  ++.+          
T Consensus         3 m~~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t--~d~~----------   69 (321)
T 3p7m_A            3 MARKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT--NDYK----------   69 (321)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc--CCHH----------
Confidence            45567889995 9999999999999887 9999999987655433333221      2222211  1221          


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                       .+.+-|++|..++....+      ..+..+   .+..|..-...+.+.+.++   .+.+.++++|
T Consensus        70 -a~~~aDvVIi~ag~p~k~------G~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~vivvt  122 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKP------GMSRDD---LLGINIKVMQTVGEGIKHN---CPNAFVICIT  122 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCT------TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             -HHCCCCEEEEcCCcCCCC------CCCHHH---HHHHhHHHHHHHHHHHHHH---CCCcEEEEec
Confidence             123679999987654321      234433   3445665555555555544   2557777777

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.28  E-value=0.053  Score=46.53  Aligned_cols=44  Identities=20%  Similarity=0.235  Sum_probs=39.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      +.+++++|.|+ |.+|..+++.+...|++|++.+++.+..+.+.+
T Consensus       182 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  225 (381)
T 3p2y_A          182 VKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS  225 (381)
T ss_dssp             ECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH
T ss_pred             cCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            57889999999 789999999999999999999999988777655

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.23  E-value=0.015  Score=50.09  Aligned_cols=45  Identities=18%  Similarity=0.200  Sum_probs=39.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++.++++...+.+.+
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~~  213 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES  213 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence            578999999997 899999999999999999999999887666544

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=96.19  E-value=0.13  Score=43.02  Aligned_cols=111  Identities=20%  Similarity=0.212  Sum_probs=65.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-C--CEEEEEecCcchHHHHHHHhCCC--ceEEEEe-eCCCHHHHHHHHHHHHHHcCC
Q 025252           28 VAIITGGASGIGASAAQLFHKN-G--AKVVIADVQDNLGQALADKLGHQ--DVCYIHC-DVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g--~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~-D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.|+||+|.+|.+++..|... +  .++++++.++ ..+-...++.+.  ....... .-.+.+.+           .+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~~-----------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHHh-----------CC
Confidence            5889999999999999999875 4  5899999987 222222222221  1121111 11122221           36


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .|++|..||....+      ..+.+   +.++.|..-...+.+.+.++   .+.+.++++|
T Consensus        70 aDivii~ag~~rkp------G~~R~---dll~~N~~I~~~i~~~i~~~---~p~a~vlvvt  118 (312)
T 3hhp_A           70 ADVVLISAGVARKP------GMDRS---DLFNVNAGIVKNLVQQVAKT---CPKACIGIIT  118 (312)
T ss_dssp             CSEEEECCSCSCCT------TCCHH---HHHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCEEEEeCCCCCCC------CCCHH---HHHHHHHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            89999977644211      23443   34556666655566666554   3567788877

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=96.18  E-value=0.012  Score=48.88  Aligned_cols=109  Identities=16%  Similarity=0.057  Sum_probs=63.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHH----HHh--CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALA----DKL--GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~----~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |.+|.+++..|+..|.  +|++.+++++..+...    ...  -.........  +|.+.           .
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a-----------~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH-----------h
Confidence            5889999 9999999999999987  9999999987654211    111  0011122111  12221           2


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .+-|++|..++....+      ..+..+   .++.|..-.-.+.+.+.++   .+.+.++++|
T Consensus        68 ~~aDiVViaag~~~kp------G~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~iivvs  118 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP------GMTRLD---LAHKNAGIIKDIAKKIVEN---APESKILVVT  118 (294)
T ss_dssp             TTCSEEEECCCCCCCS------SCCHHH---HHHHHHHHHHHHHHHHHTT---STTCEEEECS
T ss_pred             CCCCEEEECCCCCCCC------CCcHHH---HHHHHHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence            3679999987654311      234433   3555554443444444332   3567788777

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=96.17  E-value=0.035  Score=48.11  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=39.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      +.+.+++|.|+ |.+|..+++.+...|++|++.++++...+.+.+
T Consensus       188 v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~  231 (405)
T 4dio_A          188 VPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS  231 (405)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence            57889999999 799999999999999999999999987766655

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.17  E-value=0.016  Score=50.17  Aligned_cols=76  Identities=22%  Similarity=0.408  Sum_probs=51.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-C-C
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-G-K  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~  101 (255)
                      .+++++|+|+ |++|...++.....|+ +|+++++++++.+.+ .+++...    ..|..+.+ +   .+++.+.. + +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~----vi~~~~~~-~---~~~i~~~t~g~g  282 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADH----VIDPTKEN-F---VEAVLDYTNGLG  282 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSE----EECTTTSC-H---HHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCE----EEcCCCCC-H---HHHHHHHhCCCC
Confidence            5778999998 8999999988888999 899988887765544 4454321    12443332 2   23333333 2 6


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|+++.+.|
T Consensus       283 ~D~vid~~g  291 (404)
T 3ip1_A          283 AKLFLEATG  291 (404)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEECCC
Confidence            999998654

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=96.16  E-value=0.019  Score=48.69  Aligned_cols=117  Identities=16%  Similarity=0.153  Sum_probs=65.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcch--HHHHHHHhCC---C-ceEEEEeeCCCHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNL--GQALADKLGH---Q-DVCYIHCDVSNEREVI   89 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~---~-~~~~~~~D~~~~~~~~   89 (255)
                      .++.-++.|+||+|+||..++..|+....       ++++.+.++..  ++-...++.+   . ....+..+  +..   
T Consensus        21 s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~~--~~~---   95 (345)
T 4h7p_A           21 SMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVTA--DPR---   95 (345)
T ss_dssp             -CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEES--CHH---
T ss_pred             CCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEcC--ChH---
Confidence            35666899999999999999999987543       78899987642  2222222211   1 11122211  221   


Q ss_pred             HHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           90 NLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      +       .+.+-|++|..||....+      ..+.+++   ++.|..=.-.+.+.+.++  ..+...|+.+|
T Consensus        96 ~-------a~~~advVvi~aG~prkp------GmtR~DL---l~~Na~I~~~~~~~i~~~--a~~~~~vlvvs  150 (345)
T 4h7p_A           96 V-------AFDGVAIAIMCGAFPRKA------GMERKDL---LEMNARIFKEQGEAIAAV--AASDCRVVVVG  150 (345)
T ss_dssp             H-------HTTTCSEEEECCCCCCCT------TCCHHHH---HHHHHHHHHHHHHHHHHH--SCTTCEEEECS
T ss_pred             H-------HhCCCCEEEECCCCCCCC------CCCHHHH---HHHhHHHHHHHHHHHHhh--ccCceEEEEeC
Confidence            1       123789999877655322      2455554   455655444444444333  12344566666

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.14  E-value=0.02  Score=46.36  Aligned_cols=39  Identities=28%  Similarity=0.423  Sum_probs=32.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      .+.++++++++|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        22 ~q~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d   61 (251)
T 1zud_1           22 GQQKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDD   61 (251)
T ss_dssp             HHHHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCC
T ss_pred             HHHHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            345688999999998 6799999999999996 77787654

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=96.14  E-value=0.038  Score=46.34  Aligned_cols=115  Identities=17%  Similarity=0.138  Sum_probs=64.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+++.|+|+ |.+|..++..|+..|.  +|++.|.++++.+.....+.+.........++. .+        .+.+..-|
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~~--------~~a~~~aD   76 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA-GD--------YSDVKDCD   76 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC---C--------GGGGTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE-CC--------HHHhCCCC
Confidence            346999998 9999999999999886  999999987665443444432210000111111 00        11134789


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ++|..++.....      ..+.+   +.+..|+.-...+++.+.++   .+.+.++++|
T Consensus        77 vVii~~g~p~k~------g~~r~---dl~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (318)
T 1y6j_A           77 VIVVTAGANRKP------GETRL---DLAKKNVMIAKEVTQNIMKY---YNHGVILVVS  123 (318)
T ss_dssp             EEEECCCC------------CHH---HHHHHHHHHHHHHHHHHHHH---CCSCEEEECS
T ss_pred             EEEEcCCCCCCC------CcCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEEec
Confidence            999976543211      12333   34566666665666666655   3567777766

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.11  E-value=0.0097  Score=51.02  Aligned_cols=76  Identities=28%  Similarity=0.407  Sum_probs=50.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH---H-c
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA---K-F   99 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~---~-~   99 (255)
                      .+++++|+|+ |++|...++.....|+ +|+++++++++.+ +.++++...    ..|.++.+ +   .+.+.+   . .
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~-~a~~lGa~~----vi~~~~~~-~---~~~i~~~~~~~~  251 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRR-LAEEVGATA----TVDPSAGD-V---VEAIAGPVGLVP  251 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHH-HHHHHTCSE----EECTTSSC-H---HHHHHSTTSSST
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHH-HHHHcCCCE----EECCCCcC-H---HHHHHhhhhccC
Confidence            5789999998 8999999988888998 8888888877654 444454321    13444432 2   223322   1 2


Q ss_pred             CCccEEEEcCC
Q 025252          100 GKLDILVNSGC  110 (255)
Q Consensus       100 g~id~li~~a~  110 (255)
                      +++|+++.+.|
T Consensus       252 gg~Dvvid~~G  262 (370)
T 4ej6_A          252 GGVDVVIECAG  262 (370)
T ss_dssp             TCEEEEEECSC
T ss_pred             CCCCEEEECCC
Confidence            47999998654

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.09  E-value=0.0084  Score=51.49  Aligned_cols=78  Identities=15%  Similarity=0.237  Sum_probs=51.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++++.+ .+++...    ..|..+ .+++.+.+.++-  .+++
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~----vi~~~~~~~~~~~~i~~~~--~gg~  264 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFGVNE----FVNPKDHDKPIQEVIVDLT--DGGV  264 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTTCCE----EECGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCcE----EEccccCchhHHHHHHHhc--CCCC
Confidence            4778999998 9999999988888898 899999888876644 4444221    133331 122333333321  2479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.+
T Consensus       265 D~vid~~g  272 (378)
T 3uko_A          265 DYSFECIG  272 (378)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=96.03  E-value=0.0073  Score=51.00  Aligned_cols=69  Identities=12%  Similarity=0.158  Sum_probs=54.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .+.++|.|. |.+|+.+++.|.++|. |++++++++..+ +.+    ..+.++.+|.++++.++++      ...+.|.+
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~----~~~~~i~gd~~~~~~L~~a------~i~~a~~v  181 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR----SGANFVHGDPTRVSDLEKA------NVRGARAV  181 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH----TTCEEEESCTTSHHHHHHT------CSTTEEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh----CCcEEEEeCCCCHHHHHhc------ChhhccEE
Confidence            457999997 8999999999999999 999999988776 443    3678899999999887654      11256777


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |.
T Consensus       182 i~  183 (336)
T 1lnq_A          182 IV  183 (336)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=95.97  E-value=0.13  Score=43.27  Aligned_cols=39  Identities=21%  Similarity=0.285  Sum_probs=34.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQA   65 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~   65 (255)
                      .+++.|+|+ |.+|.+++..|+..|. +|++.+++++.++.
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~   48 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEG   48 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHH
Confidence            457999998 9999999999999998 99999999876655

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.94  E-value=0.45  Score=38.84  Aligned_cols=139  Identities=12%  Similarity=0.143  Sum_probs=84.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEE-EecCcc---------------------hHHHHHHHhCCCceEEEEee
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVI-ADVQDN---------------------LGQALADKLGHQDVCYIHCD   81 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~-~~r~~~---------------------~~~~~~~~~~~~~~~~~~~D   81 (255)
                      +..++.|+|++|.+|+.+++.+.+. +.+++. ++++.+                     ...++.++     . -+..|
T Consensus         6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~-----~-DVVID   79 (272)
T 4f3y_A            6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAE-----A-DYLID   79 (272)
T ss_dssp             CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHH-----C-SEEEE
T ss_pred             cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcC-----C-CEEEE
Confidence            3457999999999999999999875 567666 466532                     12222221     1 14578


Q ss_pred             CCCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEe
Q 025252           82 VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYT  161 (255)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~i  161 (255)
                      +|.++...+.++...++  ++++++-+   .+         .+.++.++.            +.+    . + +..+++.
T Consensus        80 fT~p~a~~~~~~~al~~--G~~vVigT---TG---------~s~~~~~~L------------~~a----a-~-~~~vv~a  127 (272)
T 4f3y_A           80 FTLPEGTLVHLDAALRH--DVKLVIGT---TG---------FSEPQKAQL------------RAA----G-E-KIALVFS  127 (272)
T ss_dssp             CSCHHHHHHHHHHHHHH--TCEEEECC---CC---------CCHHHHHHH------------HHH----T-T-TSEEEEC
T ss_pred             cCCHHHHHHHHHHHHHc--CCCEEEEC---CC---------CCHHHHHHH------------HHH----h-c-cCCEEEE
Confidence            88888888888777776  67877742   22         123332211            111    1 1 2234332


Q ss_pred             ccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhc-ccCcEEeEeccCcchhhh
Q 025252          162 TGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVSHTYGLAMA  220 (255)
Q Consensus       162 s~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~p~~~~~t~  220 (255)
                      +                   .|+..=..+..+.+.+|+.+. .+.|.+.-.+...-.|.|
T Consensus       128 ~-------------------N~s~Gv~l~~~~~~~aa~~l~~~~diei~E~HH~~K~DaP  168 (272)
T 4f3y_A          128 A-------------------NMSVGVNVTMKLLEFAAKQFAQGYDIEIIEAHHRHKVDAP  168 (272)
T ss_dssp             S-------------------CCCHHHHHHHHHHHHHHHHTSSSCEEEEEEEECTTCCSSS
T ss_pred             C-------------------CCCHHHHHHHHHHHHHHHhcCcCCCEEEEEecCCCCCCCC
Confidence            2                   155656677788888888884 456888888763445554

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.92  E-value=0.022  Score=49.21  Aligned_cols=76  Identities=20%  Similarity=0.231  Sum_probs=50.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .+++++|.|+ |++|...++.....|+ +|+++++++++.+.+ .+++.   ..  .|.++.+.+.+   ++.+..  .+
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa---~~--i~~~~~~~~~~---~v~~~t~g~g  254 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF---EI--ADLSLDTPLHE---QIAALLGEPE  254 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC---EE--EETTSSSCHHH---HHHHHHSSSC
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCC---cE--EccCCcchHHH---HHHHHhCCCC
Confidence            5789999995 9999998888877898 788888887776555 44442   22  35444322222   222222  26


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|.+.|
T Consensus       255 ~Dvvid~~G  263 (398)
T 1kol_A          255 VDCAVDAVG  263 (398)
T ss_dssp             EEEEEECCC
T ss_pred             CCEEEECCC
Confidence            999999755

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.89  E-value=0.036  Score=47.33  Aligned_cols=76  Identities=16%  Similarity=0.188  Sum_probs=49.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  102 (255)
                      .+++++|+|+ |++|...++.+...|+ +|+++++++++.+.+ ++++...  .  .|..+.+ +   .+++.+.. +++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~--v--i~~~~~~-~---~~~~~~~~~gg~  259 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATH--V--INSKTQD-P---VAAIKEITDGGV  259 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSE--E--EETTTSC-H---HHHHHHHTTSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCCE--E--ecCCccC-H---HHHHHHhcCCCC
Confidence            4788999995 8999999888877898 688899887766554 3444221  1  2433322 2   22233322 479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.+
T Consensus       260 D~vid~~g  267 (371)
T 1f8f_A          260 NFALESTG  267 (371)
T ss_dssp             EEEEECSC
T ss_pred             cEEEECCC
Confidence            99998654

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.86  E-value=0.051  Score=42.54  Aligned_cols=77  Identities=16%  Similarity=0.212  Sum_probs=49.5

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .+.++..+++.|.| .|.+|.++++.|++.|++|.+.+|+++       ......+.++..  . ...++++++++....
T Consensus        13 ~~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~~~~aD~vi~av--~-~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           13 ENLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------ATTLGEIVIMAV--P-YPALAALAKQYATQL   81 (209)
T ss_dssp             -------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------CSSCCSEEEECS--C-HHHHHHHHHHTHHHH
T ss_pred             cccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------HhccCCEEEEcC--C-cHHHHHHHHHHHHhc
Confidence            34567788899999 589999999999999999999999876       122233433332  2 667778887776544


Q ss_pred             CCccEEEEc
Q 025252          100 GKLDILVNS  108 (255)
Q Consensus       100 g~id~li~~  108 (255)
                      . =.++++.
T Consensus        82 ~-~~~vi~~   89 (209)
T 2raf_A           82 K-GKIVVDI   89 (209)
T ss_dssp             T-TSEEEEC
T ss_pred             C-CCEEEEE
Confidence            3 2355554

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=95.83  E-value=0.015  Score=49.74  Aligned_cols=48  Identities=23%  Similarity=0.372  Sum_probs=42.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.||+++|.|. |.+|..+++.|.+.|++|++.+++.+.++++.+++.
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~g  217 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG  217 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcC
Confidence            589999999997 789999999999999999999998887777776653

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=95.79  E-value=0.014  Score=47.95  Aligned_cols=39  Identities=26%  Similarity=0.508  Sum_probs=35.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||+++|+|.++-.|+.+++.|.++|+.|.++.++.
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            458999999999999999999999999999999987654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=95.77  E-value=0.0076  Score=49.51  Aligned_cols=47  Identities=21%  Similarity=0.343  Sum_probs=39.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL   70 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~   70 (255)
                      ++.+++++|.|+ |++|+++++.|.+.|.+|.+++|+.++.+++.+++
T Consensus       126 ~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~  172 (275)
T 2hk9_A          126 EVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF  172 (275)
T ss_dssp             TGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc
Confidence            467889999997 79999999999999999999999987766665543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=95.76  E-value=0.11  Score=43.09  Aligned_cols=108  Identities=17%  Similarity=0.195  Sum_probs=61.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.|+|+ |.+|..++..|+..|.  +|++.+++++..+.....+...     ..... .+  +.+           ...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~~--~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-HG--GHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-EE--CGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-EC--CHH-----------HhC
Confidence            5889998 9999999999999998  9999999987655444443321     11221 11  221           123


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .-|++|.+++.....+      .+.+   +.+..|..-...+++.+.++   .+.+.++++|
T Consensus        67 ~aDvVIi~~~~~~~~g------~~r~---dl~~~n~~i~~~i~~~i~~~---~p~~~vi~~t  116 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG------ESRL---DLLEKNADIFRELVPQITRA---APDAVLLVTS  116 (304)
T ss_dssp             TCSEEEECC---------------------CHHHHHHHHHHHHHHHHHH---CSSSEEEECS
T ss_pred             CCCEEEEcCCCCCCCC------CcHH---HHHHhHHHHHHHHHHHHHHh---CCCeEEEEec
Confidence            6799999765433111      1111   23445555555555555554   2456666655

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.75  E-value=0.081  Score=44.30  Aligned_cols=112  Identities=17%  Similarity=0.171  Sum_probs=66.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++.+++.|+|+ |.+|.+++..|+..|  .++++.+.++++.+.....+.+      ..+.+. .|  +.+         
T Consensus         4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~---------   70 (317)
T 3d0o_A            4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS---------   70 (317)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH---------
Confidence            34567999999 999999999999988  4899999987654432222111      122222 22  222         


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                        .+.+-|++|..++.....      ..+.++   .+..|..-...+++.+.++   .+.+.++++|
T Consensus        71 --a~~~aDvVvi~ag~~~~~------g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~viv~t  123 (317)
T 3d0o_A           71 --DCHDADLVVICAGAAQKP------GETRLD---LVSKNLKIFKSIVGEVMAS---KFDGIFLVAT  123 (317)
T ss_dssp             --GGTTCSEEEECCCCCCCT------TCCHHH---HHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             --HhCCCCEEEECCCCCCCC------CCcHHH---HHHHHHHHHHHHHHHHHHh---CCCcEEEEec
Confidence              123679999977543311      223332   3455555444455555443   3567777766

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=95.74  E-value=0.039  Score=47.61  Aligned_cols=77  Identities=22%  Similarity=0.224  Sum_probs=50.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC-Cc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG-KL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~i  102 (255)
                      .+++++|.|+ |++|...++.+...|+ +|+++++++++.+.+. +++   ...  .|..+.+.+.+.+.+..  .+ ++
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lG---a~~--i~~~~~~~~~~~~~~~~--~g~g~  255 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLLS-DAG---FET--IDLRNSAPLRDQIDQIL--GKPEV  255 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-TTT---CEE--EETTSSSCHHHHHHHHH--SSSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcC---CcE--EcCCCcchHHHHHHHHh--CCCCC
Confidence            5789999997 9999998888877898 8999999887765544 443   232  35444221122222221  13 69


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus       256 Dvvid~~g  263 (398)
T 2dph_A          256 DCGVDAVG  263 (398)
T ss_dssp             EEEEECSC
T ss_pred             CEEEECCC
Confidence            99999754

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=95.73  E-value=0.087  Score=44.34  Aligned_cols=112  Identities=15%  Similarity=0.111  Sum_probs=68.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      -+.+++.|+|+ |.+|.+++..++..+.  ++++.++++++++.....+.+.     ++.+. .|  +.+.         
T Consensus         7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a---------   73 (326)
T 2zqz_A            7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD---------   73 (326)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG---------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH---------
Confidence            34567999999 9999999999998875  8999999877665544433221     22222 22  2221         


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                        +.+-|++|..++.....      ..+.++   .+..|..-...+.+.+.++   .+.+.++++|
T Consensus        74 --~~~aDvVii~ag~~~k~------g~~R~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  125 (326)
T 2zqz_A           74 --AKDADLVVITAGAPQKP------GETRLD---LVNKNLKILKSIVDPIVDS---GFNGIFLVAA  125 (326)
T ss_dssp             --GGGCSEEEECCCCC-----------CHHH---HHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             --hCCCCEEEEcCCCCCCC------CCCHHH---HHHHHHHHHHHHHHHHHHH---CCCeEEEEeC
Confidence              23679999976543211      123333   3455655555555555544   3568888877

>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}

Probab=95.72  E-value=0.058  Score=44.28  Aligned_cols=79  Identities=10%  Similarity=0.156  Sum_probs=55.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC---EEEEEecCcchHHHHHHHhCC------------CceEEEEeeCCCHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA---KVVIADVQDNLGQALADKLGH------------QDVCYIHCDVSNEREVI   89 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~---~v~~~~r~~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~   89 (255)
                      +.+++.|.|+ |.+|.++++.|++.|+   +|.+.+|+++..+++.++++-            ..+.++-.   .++.++
T Consensus         2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~~~~~~~~~~aDvVilav---~p~~~~   77 (280)
T 3tri_A            2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKCGVHTTQDNRQGALNADVVVLAV---KPHQIK   77 (280)
T ss_dssp             CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTTCCEEESCHHHHHSSCSEEEECS---CGGGHH
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHcCCEEeCChHHHHhcCCeEEEEe---CHHHHH
Confidence            3456888888 8899999999999998   899999999887777665321            12222222   356677


Q ss_pred             HHHHHHHHH-cCCcc-EEEEc
Q 025252           90 NLVDTTVAK-FGKLD-ILVNS  108 (255)
Q Consensus        90 ~~~~~~~~~-~g~id-~li~~  108 (255)
                      ++++++... .. -+ ++|.+
T Consensus        78 ~vl~~l~~~~l~-~~~iiiS~   97 (280)
T 3tri_A           78 MVCEELKDILSE-TKILVISL   97 (280)
T ss_dssp             HHHHHHHHHHHT-TTCEEEEC
T ss_pred             HHHHHHHhhccC-CCeEEEEe
Confidence            777777654 32 34 67765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=95.72  E-value=0.048  Score=45.70  Aligned_cols=84  Identities=13%  Similarity=0.116  Sum_probs=54.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----C-----CceEEEEeeCCCHHHHHHHHH-
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----H-----QDVCYIHCDVSNEREVINLVD-   93 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~-----~~~~~~~~D~~~~~~~~~~~~-   93 (255)
                      ...+++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+.--    .     ....++..=+.++..++.++. 
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~~  107 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLFA  107 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHTT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHcc
Confidence            34567888876 789999999999999999999999887766654300    0     123333344455566666665 


Q ss_pred             -HHHHHcCCccEEEEc
Q 025252           94 -TTVAKFGKLDILVNS  108 (255)
Q Consensus        94 -~~~~~~g~id~li~~  108 (255)
                       .+.+...+-.++|+.
T Consensus       108 ~~~~~~l~~~~~vi~~  123 (320)
T 4dll_A          108 QGVAAAMKPGSLFLDM  123 (320)
T ss_dssp             TCHHHHCCTTCEEEEC
T ss_pred             hhHHhhCCCCCEEEec
Confidence             454444334556653

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=95.67  E-value=0.13  Score=43.20  Aligned_cols=111  Identities=13%  Similarity=0.056  Sum_probs=66.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-----CceEEE-EeeCCCHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-----QDVCYI-HCDVSNEREVINLVDTTV   96 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~-~~D~~~~~~~~~~~~~~~   96 (255)
                      ..+++.|+|+ |.+|..++..++..|.  +|++.+.+++..+.....+.+     ...... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            3467999999 9999999999999986  899999987755443322211     111112 223211            


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                        +..-|++|..||....++      .+.+   +.+..|..-.-.+.+.+.++   .+.+.++++|
T Consensus        87 --~~daDiVIitaG~p~kpG------~tR~---dll~~N~~I~k~i~~~I~k~---~P~a~ilvvt  138 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQEG------ESRL---NLVQRNVNIFKFIIPNIVKH---SPDCLKELHP  138 (330)
T ss_dssp             --CSSCSEEEECCSCCCCSS------CCTT---GGGHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             --hCCCCEEEEeCCCCCCCC------CCHH---HHHHhhHHHHHHHHHHHHhh---CCCceEEeCC
Confidence              236799998876543222      2222   23344544444455555444   3567788877

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=95.66  E-value=0.13  Score=39.71  Aligned_cols=73  Identities=11%  Similarity=0.070  Sum_probs=53.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---------------CCceEEEEeeCCCHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---------------HQDVCYIHCDVSNEREVI   89 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~~~   89 (255)
                      .+++++-.|.++|.-   +..|+++|++|+.++.++...+.+.++..               ..++.++.+|+.+...-.
T Consensus        22 ~~~~vLD~GCG~G~~---~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~   98 (203)
T 1pjz_A           22 PGARVLVPLCGKSQD---MSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   98 (203)
T ss_dssp             TTCEEEETTTCCSHH---HHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEeCCCCcHh---HHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCccc
Confidence            567899999887643   45567779999999999998887776643               247899999998754211


Q ss_pred             HHHHHHHHHcCCccEEEEcC
Q 025252           90 NLVDTTVAKFGKLDILVNSG  109 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~a  109 (255)
                               .+.+|+++.++
T Consensus        99 ---------~~~fD~v~~~~  109 (203)
T 1pjz_A           99 ---------IGHCAAFYDRA  109 (203)
T ss_dssp             ---------HHSEEEEEEES
T ss_pred             ---------CCCEEEEEECc
Confidence                     03789998643

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.64  E-value=0.05  Score=45.09  Aligned_cols=68  Identities=18%  Similarity=0.243  Sum_probs=46.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++.|.||.|.+|.++++.|.+.|++|.+.+|+++..  ..+......+.++..-.   ..+.++++++...
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~--~~~~~~~aDvVilavp~---~~~~~vl~~l~~~   88 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAV--AESILANADVVIVSVPI---NLTLETIERLKPY   88 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGG--HHHHHTTCSEEEECSCG---GGHHHHHHHHGGG
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccC--HHHHhcCCCEEEEeCCH---HHHHHHHHHHHhh
Confidence            35699999899999999999999999999999886531  22223334455544332   3366667766543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.53  E-value=0.015  Score=48.91  Aligned_cols=43  Identities=28%  Similarity=0.516  Sum_probs=36.7

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      +++|+|++|++|...++.+...|++|+++++++++.+.+. +++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lG  195 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLG  195 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHT
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcC
Confidence            7999999999999999988889999999999877765554 454

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.53  E-value=0.018  Score=48.86  Aligned_cols=76  Identities=18%  Similarity=0.255  Sum_probs=49.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-C-C
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-G-K  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~  101 (255)
                      .+++++|+|+ |++|...++.....|+ +|+++++++++.+. ..+++...  +  .|.++.+    +.+++.+.. + +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~-~~~lGa~~--v--i~~~~~~----~~~~v~~~t~g~g  235 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDI-ALEYGATD--I--INYKNGD----IVEQILKATDGKG  235 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHH-HHHHTCCE--E--ECGGGSC----HHHHHHHHTTTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHH-HHHhCCce--E--EcCCCcC----HHHHHHHHcCCCC
Confidence            4778999985 8999998888888898 79999988776544 44454321  1  2333322    223333333 2 6


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|+++.+.+
T Consensus       236 ~D~v~d~~g  244 (352)
T 3fpc_A          236 VDKVVIAGG  244 (352)
T ss_dssp             EEEEEECSS
T ss_pred             CCEEEECCC
Confidence            999998654

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=95.51  E-value=0.017  Score=49.10  Aligned_cols=47  Identities=19%  Similarity=0.205  Sum_probs=35.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch---HHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL---GQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~---~~~~~~~~~   71 (255)
                      .|++++|+|++|++|...++.....|++++++.+..+.   ..+...+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lG  216 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLG  216 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTT
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcC
Confidence            57899999999999999988887789998887665432   223444554

>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}

Probab=95.50  E-value=0.47  Score=37.44  Aligned_cols=77  Identities=10%  Similarity=-0.015  Sum_probs=55.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++=.|++.|.   .+..|++.+.+|+.++.++...+...+.....++.++.+|+.+......+-..     ...|+
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~-----~~~d~  127 (245)
T 3ggd_A           56 PELPLIDFACGNGT---QTKFLSQFFPRVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSE-----IGDAN  127 (245)
T ss_dssp             TTSCEEEETCTTSH---HHHHHHHHSSCEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHH-----HCSCE
T ss_pred             CCCeEEEEcCCCCH---HHHHHHHhCCCEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccc-----cCccE
Confidence            45678888887653   45566677779999999988888877776656899999999997654332111     15788


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       128 v~~~~  132 (245)
T 3ggd_A          128 IYMRT  132 (245)
T ss_dssp             EEEES
T ss_pred             EEEcc
Confidence            88653

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=95.49  E-value=0.059  Score=45.53  Aligned_cols=36  Identities=14%  Similarity=0.299  Sum_probs=31.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      ++++++++|.|+ ||+|.++++.|+..|. ++.+++++
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D   67 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNG   67 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCC
Confidence            578999999999 7899999999999995 78887664

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=95.47  E-value=0.023  Score=47.16  Aligned_cols=45  Identities=20%  Similarity=0.299  Sum_probs=38.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      ..+.+++++|.|+ |.+|+++++.+...|++|++.+|+.+..+.+.
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~  197 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT  197 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence            3578999999997 89999999999999999999999876554443

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=95.46  E-value=0.019  Score=45.63  Aligned_cols=43  Identities=21%  Similarity=0.414  Sum_probs=38.2

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +|-++++++|.++|+|| |.+|..-++.|++.|++|.+++.+..
T Consensus        23 ~Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~   65 (223)
T 3dfz_A           23 YTVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVS   65 (223)
T ss_dssp             CEEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCC
T ss_pred             cccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            66778899999999998 57999999999999999999987654

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=95.46  E-value=0.11  Score=44.27  Aligned_cols=43  Identities=26%  Similarity=0.451  Sum_probs=27.8

Q ss_pred             ecCeEEEEecCCChH---HHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           24 LQGRVAIITGGASGI---GASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        24 ~~~k~~lVtGas~gi---G~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      |++|.++..|||+|-   +.++++.|.++|++|..++.......++
T Consensus         1 M~~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~   46 (365)
T 3s2u_A            1 MKGNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDL   46 (365)
T ss_dssp             --CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHH
T ss_pred             CCCcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhch
Confidence            455555555556554   6899999999999998776544333333

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.41  E-value=0.031  Score=45.73  Aligned_cols=37  Identities=8%  Similarity=0.177  Sum_probs=34.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      +.||+++|.|.++-.|+.+++.|.++|++|.++.+..
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t  184 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT  184 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc
Confidence            7999999999999999999999999999999987643

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.39  E-value=0.024  Score=47.41  Aligned_cols=44  Identities=32%  Similarity=0.585  Sum_probs=37.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++ ++|+|++|++|...++.+...|++|+++++++++.+.+. +++
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lG  191 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLG  191 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHT
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcC
Confidence            45 999999999999999999889999999999888766554 344

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=95.38  E-value=0.057  Score=45.57  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=48.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .+++++|+|+ |++|...++..... |.+|+++++++++.+.+ .+++...+    .|-.+  +.   .+++.+..  .+
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~~----i~~~~--~~---~~~v~~~t~g~g  239 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADAA----VKSGA--GA---ADAIRELTGGQG  239 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSEE----EECST--TH---HHHHHHHHGGGC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEE----EcCCC--cH---HHHHHHHhCCCC
Confidence            5788999998 99999988777666 78999999988776544 44543221    23222  22   22233322  27


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|+++.+.|
T Consensus       240 ~d~v~d~~G  248 (345)
T 3jv7_A          240 ATAVFDFVG  248 (345)
T ss_dssp             EEEEEESSC
T ss_pred             CeEEEECCC
Confidence            999998644

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=95.37  E-value=0.071  Score=44.06  Aligned_cols=81  Identities=16%  Similarity=0.106  Sum_probs=56.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----C----CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----H----QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~----~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+.--    .    ....++..=+.++..++++++++.+.
T Consensus        16 ~~I~vIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           16 LKLGYIGL-GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CCEEEECC-STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHh
Confidence            45778875 789999999999999999999999887766554210    0    01344444555677778888777665


Q ss_pred             cCCccEEEEc
Q 025252           99 FGKLDILVNS  108 (255)
Q Consensus        99 ~g~id~li~~  108 (255)
                      ..+=.++|+.
T Consensus        95 l~~g~ivv~~  104 (296)
T 3qha_A           95 AKPGTVIAIH  104 (296)
T ss_dssp             CCTTCEEEEC
T ss_pred             cCCCCEEEEe
Confidence            4334566663

>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}

Probab=95.36  E-value=0.025  Score=45.52  Aligned_cols=44  Identities=18%  Similarity=0.237  Sum_probs=33.0

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .....++.++++.|.| .|.+|.++++.|++.|++|++.+|+++.
T Consensus        11 ~~~~~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~   54 (245)
T 3dtt_A           11 HHENLYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA   54 (245)
T ss_dssp             --------CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred             cccccccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence            3444568889999997 5889999999999999999999998775

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=95.35  E-value=0.25  Score=41.21  Aligned_cols=109  Identities=19%  Similarity=0.166  Sum_probs=67.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC-----ceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ-----DVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~-----~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.|+|+ |.+|.+++..++..+  .++++.++++++++.....+.+.     .+.+. .|  +.+.           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            35899998 999999999999887  68999999977665544443321     22222 22  2221           2


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .+-|++|..++....+      ..+.++   .+..|..-...+.+.+.++   .+.+.++++|
T Consensus        66 ~~aD~Vii~ag~~~~~------g~~r~d---l~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  116 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP------GETRLQ---LLDRNAQVFAQVVPRVLEA---APEAVLLVAT  116 (310)
T ss_dssp             TTEEEEEECCCCCCCT------TCCHHH---HHHHHHHHHHHHHHHHHHH---CTTCEEEECS
T ss_pred             CCCCEEEECCCCCCCC------CcCHHH---HHHhhHHHHHHHHHHHHHH---CCCcEEEEec
Confidence            3679999976644321      223333   3455555555555555544   3568888877

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=95.35  E-value=0.059  Score=46.21  Aligned_cols=73  Identities=23%  Similarity=0.267  Sum_probs=53.0

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+-+.+|+++|.|+ |.+|+.+++.+.+.|++|++++.++....   .+..   -..+..|..|.+.+.+++++      
T Consensus         7 ~~~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~---~~~a---d~~~~~~~~d~~~l~~~~~~------   73 (377)
T 3orq_A            7 NKLKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPC---RYVA---HEFIQAKYDDEKALNQLGQK------   73 (377)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTT---GGGS---SEEEECCTTCHHHHHHHHHH------
T ss_pred             ccCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChh---hhhC---CEEEECCCCCHHHHHHHHHh------
Confidence            34467899999997 67999999999999999999987654211   1111   13566899999888777653      


Q ss_pred             CccEEEE
Q 025252          101 KLDILVN  107 (255)
Q Consensus       101 ~id~li~  107 (255)
                       +|++..
T Consensus        74 -~dvi~~   79 (377)
T 3orq_A           74 -CDVITY   79 (377)
T ss_dssp             -CSEEEE
T ss_pred             -CCccee
Confidence             677653

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.33  E-value=0.02  Score=48.87  Aligned_cols=39  Identities=21%  Similarity=0.459  Sum_probs=33.8

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQD   60 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~   60 (255)
                      +.++++++|+|.|+ ||+|.++++.|+..|. ++.+++++.
T Consensus       113 q~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~  152 (353)
T 3h5n_A          113 QDKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQ  152 (353)
T ss_dssp             HHHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCc
Confidence            56788999999998 7899999999999995 788888763

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=95.32  E-value=0.095  Score=42.98  Aligned_cols=81  Identities=14%  Similarity=0.085  Sum_probs=53.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----C-----CceEEEEeeCCCHHHHHHHH---HH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----H-----QDVCYIHCDVSNEREVINLV---DT   94 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~-----~~~~~~~~D~~~~~~~~~~~---~~   94 (255)
                      +++.|.|. |.+|.++++.|++.|++|++.+|+++..+++.+.--    .     ....++..=+.++..+++++   ++
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~~~~   80 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPVTFAMLADPAAAEEVCFGKHG   80 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTC
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCEEEEEcCCHHHHHHHHcCcch
Confidence            46888886 889999999999999999999999887776654210    0     12233334444566677766   55


Q ss_pred             HHHHcCCccEEEEc
Q 025252           95 TVAKFGKLDILVNS  108 (255)
Q Consensus        95 ~~~~~g~id~li~~  108 (255)
                      +.+...+=.++|+.
T Consensus        81 l~~~l~~~~~vi~~   94 (287)
T 3pef_A           81 VLEGIGEGRGYVDM   94 (287)
T ss_dssp             HHHHCCTTCEEEEC
T ss_pred             HhhcCCCCCEEEeC
Confidence            55544333456653

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=95.31  E-value=0.11  Score=43.45  Aligned_cols=109  Identities=17%  Similarity=0.153  Sum_probs=63.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++.|+|+ |.+|.+++..++..+.  ++++.++++++++.....+.+     ..+.+. .|  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            47999999 9999999999998875  899999987766543333321     122222 22  222           12


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .+-|++|..++.....+      .+.+   +.+..|..-...+.+.+.++   .+.+.++++|
T Consensus        71 ~~aDvVii~ag~~~~~g------~~R~---dl~~~n~~i~~~i~~~i~~~---~p~a~iiv~t  121 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG------ESRL---DLVNKNLNILSSIVKPVVDS---GFDGIFLVAA  121 (318)
T ss_dssp             TTCSEEEECCCC-------------------CHHHHHHHHHHHHHHHHHT---TCCSEEEECS
T ss_pred             CCCCEEEECCCCCCCCC------CCHH---HHHHHHHHHHHHHHHHHHHh---CCCeEEEEeC
Confidence            46899999776443211      1222   23444555444444444433   3567888877

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=95.29  E-value=0.064  Score=44.64  Aligned_cols=43  Identities=19%  Similarity=0.094  Sum_probs=36.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      +.+++.|.|. |.+|..+++.|++.|++|++.+|+++..+++.+
T Consensus        20 ~m~~I~iIG~-G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~   62 (310)
T 3doj_A           20 HMMEVGFLGL-GIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVE   62 (310)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH
T ss_pred             cCCEEEEECc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence            3457888875 789999999999999999999999887776653

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=95.28  E-value=0.19  Score=41.82  Aligned_cols=40  Identities=20%  Similarity=0.345  Sum_probs=33.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALA   67 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~   67 (255)
                      +++.|+|+ |.+|..++..++..|. +|++.++++++++...
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~   43 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKA   43 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHH
Confidence            46999999 9999999999999996 8999999887665433

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=95.28  E-value=0.03  Score=46.36  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=37.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      ++.+|+++|.|. |++|+++++.+...|++|++.+|+.+..+.+
T Consensus       152 ~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~  194 (293)
T 3d4o_A          152 TIHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARI  194 (293)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred             CCCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence            578999999996 8999999999999999999999987655444

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=95.27  E-value=0.079  Score=43.89  Aligned_cols=109  Identities=17%  Similarity=0.101  Sum_probs=63.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |++|..++..|..++  .++++.|.+++..+-....+.+      ........  .|++.           .
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCHHH-----------h
Confidence            4788895 999999999998877  4899999987543332222211      12222222  12221           1


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .+-|++|..||....+      ..+.+++   ++.|..=.-.+.+.+.+   ..+.+.++.+|
T Consensus        68 ~~aDvVvitAG~prkp------GmtR~dL---l~~Na~I~~~i~~~i~~---~~p~aivlvvs  118 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKP------GMTRLDL---AHKNAGIIKDIAKKIVE---NAPESKILVVT  118 (294)
T ss_dssp             TTCSEEEECCCCCCCS------SSCHHHH---HHHHHHHHHHHHHHHHT---TSTTCEEEECS
T ss_pred             CCCCEEEEecCCCCCC------CCchHHH---HHHHHHHHHHHHHHHHh---cCCceEEEEec
Confidence            3679999987755422      2455554   45555543334444432   23457777777

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=95.26  E-value=0.023  Score=46.21  Aligned_cols=47  Identities=28%  Similarity=0.456  Sum_probs=40.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++++ +++|.|+ |++|+++++.|.+.|++|.+++|+.++.+++.++++
T Consensus       114 ~l~~-~v~iiG~-G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~  160 (263)
T 2d5c_A          114 PLKG-PALVLGA-GGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFG  160 (263)
T ss_dssp             CCCS-CEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHT
T ss_pred             CCCC-eEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc
Confidence            4678 8999997 779999999999999999999999887777777654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.23  E-value=0.032  Score=45.84  Aligned_cols=39  Identities=21%  Similarity=0.261  Sum_probs=35.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||.++|.|.++-.|+.+++.|...|+.|.++.+..
T Consensus       157 i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          157 ADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             CCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            458999999999998899999999999999999987643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=95.21  E-value=0.058  Score=47.69  Aligned_cols=72  Identities=19%  Similarity=0.328  Sum_probs=58.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      -|.++|.|| |.+|..+|+.| ++.++|.++.++.+..+.+.++++  +..++.+|.+|++-+++.      .....|++
T Consensus       235 ~~~v~I~Gg-G~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l~--~~~Vi~GD~td~~~L~ee------~i~~~D~~  304 (461)
T 4g65_A          235 YRRIMIVGG-GNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEELE--NTIVFCGDAADQELLTEE------NIDQVDVF  304 (461)
T ss_dssp             CCEEEEECC-SHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHCT--TSEEEESCTTCHHHHHHT------TGGGCSEE
T ss_pred             ccEEEEEcc-hHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHCC--CceEEeccccchhhHhhc------CchhhcEE
Confidence            456888887 67999999998 567999999999999999998885  678899999999876553      22356888


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      |-
T Consensus       305 ia  306 (461)
T 4g65_A          305 IA  306 (461)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.16  E-value=0.031  Score=45.90  Aligned_cols=42  Identities=14%  Similarity=0.285  Sum_probs=36.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      +++.|.|++|.+|.++++.|.+.|++|++.+|+++..+++.+
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~   53 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG   53 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh
Confidence            469999999999999999999999999999998877666544

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.12  E-value=0.038  Score=45.74  Aligned_cols=39  Identities=28%  Similarity=0.449  Sum_probs=35.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++.||.++|.|.++-.|+.+++.|.+.|++|.++.|..
T Consensus       161 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          161 IEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            458999999999988899999999999999999988743

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.10  E-value=0.035  Score=45.64  Aligned_cols=38  Identities=21%  Similarity=0.356  Sum_probs=34.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      .++.||.++|.|.++-.|+.+++.|.++|+.|.++.+.
T Consensus       157 i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          157 IKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            45899999999998889999999999999999988764

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.01  E-value=0.082  Score=46.05  Aligned_cols=71  Identities=14%  Similarity=0.154  Sum_probs=52.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      -+.+|+++|.|+ |-+|+.+++.+.+.|++|++++.++......   ..   -..+..|..|.+.+.++++       ++
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~---~a---d~~~~~~~~d~~~l~~~a~-------~~   97 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGA---VA---DRHLRAAYDDEAALAELAG-------LC   97 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHH---HS---SEEECCCTTCHHHHHHHHH-------HC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhh---hC---CEEEECCcCCHHHHHHHHh-------cC
Confidence            468999999997 5699999999999999999998765432211   11   1245578889988877763       57


Q ss_pred             cEEEE
Q 025252          103 DILVN  107 (255)
Q Consensus       103 d~li~  107 (255)
                      |+++.
T Consensus        98 D~V~~  102 (419)
T 4e4t_A           98 EAVST  102 (419)
T ss_dssp             SEEEE
T ss_pred             CEEEE
Confidence            88874

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.99  E-value=0.12  Score=41.76  Aligned_cols=81  Identities=12%  Similarity=0.184  Sum_probs=53.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhCC----------CceEEEEeeCCCHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGH----------QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      ++++.|.|+ |.+|..+++.|.+.|++ |.+.+|+++..+++.++++-          .....+. .......+++++++
T Consensus        10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi-~av~~~~~~~v~~~   87 (266)
T 3d1l_A           10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYI-VSLKDSAFAELLQG   87 (266)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEE-ECCCHHHHHHHHHH
T ss_pred             CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEE-EecCHHHHHHHHHH
Confidence            456889997 89999999999999998 88899998877776655321          1122222 22334456777777


Q ss_pred             HHHHcCCccEEEEc
Q 025252           95 TVAKFGKLDILVNS  108 (255)
Q Consensus        95 ~~~~~g~id~li~~  108 (255)
                      +.+...+=.+++++
T Consensus        88 l~~~~~~~~ivv~~  101 (266)
T 3d1l_A           88 IVEGKREEALMVHT  101 (266)
T ss_dssp             HHTTCCTTCEEEEC
T ss_pred             HHhhcCCCcEEEEC
Confidence            65533222366665

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=94.99  E-value=0.32  Score=40.47  Aligned_cols=109  Identities=17%  Similarity=0.152  Sum_probs=65.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHc--CCEEEEEecCcchHHHHHHHhCCC------ceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKN--GAKVVIADVQDNLGQALADKLGHQ------DVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~--g~~v~~~~r~~~~~~~~~~~~~~~------~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |.+|.+++..|+..  |.+|++.+++++..+.....+...      .......  +|.++           .
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~~-----------l   67 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEEC--CCHHH-----------H
Confidence            5889998 99999999999985  789999999987666543222111      1111110  22221           2


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ..-|++|.+++...    .  ...+.   ...++.|..-...+.+.+.++.   +.+.+++++
T Consensus        68 ~~aDvViiav~~p~----~--~g~~r---~dl~~~n~~i~~~i~~~i~~~~---~~~~viv~t  118 (310)
T 1guz_A           68 ANSDIVIITAGLPR----K--PGMTR---EDLLMKNAGIVKEVTDNIMKHS---KNPIIIVVS  118 (310)
T ss_dssp             TTCSEEEECCSCCC----C--TTCCH---HHHHHHHHHHHHHHHHHHHHHC---SSCEEEECC
T ss_pred             CCCCEEEEeCCCCC----C--CCCCH---HHHHHHHHHHHHHHHHHHHHhC---CCcEEEEEc
Confidence            36799998654321    1  11122   2345556666556666666652   456777766

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=94.94  E-value=0.03  Score=45.87  Aligned_cols=46  Identities=26%  Similarity=0.395  Sum_probs=40.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+++++|.|+ ||.|++++..|.+.|. +|.++.|+.++.+++.++++
T Consensus       118 ~~~~vlvlGa-Ggaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~  164 (271)
T 1npy_A          118 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG  164 (271)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcC
Confidence            4678999996 7899999999999997 79999999888888887764

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=94.88  E-value=0.047  Score=44.91  Aligned_cols=40  Identities=13%  Similarity=0.179  Sum_probs=35.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .++.||+++|.|++.-+|+.+++.|+.+|++|.++.+...
T Consensus       155 i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  194 (288)
T 1b0a_A          155 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK  194 (288)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            4689999999999988999999999999999999876543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.80  E-value=0.21  Score=41.77  Aligned_cols=109  Identities=17%  Similarity=0.156  Sum_probs=62.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |.+|.+++..++..|.  ++++.++++++.+....++.+      ........|  +.+           .+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~~-----------a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DYG-----------PT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SSG-----------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CHH-----------Hh
Confidence            5889997 9999999999999886  899999998765432222211      122222122  121           22


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ..-|++|..+|....+      ..+..   +.++.|..-.-.+.+.+.++   .+.+.++++|
T Consensus        68 ~~aDvVii~ag~~~kp------G~~R~---dl~~~N~~i~~~i~~~i~~~---~p~a~vivvt  118 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP------GMSRD---DLLAKNTEIVGGVTEQFVEG---SPDSTIIVVA  118 (314)
T ss_dssp             TTCSEEEECCCC-------------CH---HHHHHHHHHHHHHHHHHHTT---CTTCEEEECC
T ss_pred             CCCCEEEECCCCCCCC------CCCHH---HHHHhhHHHHHHHHHHHHHh---CCCcEEEecC
Confidence            3679999977654311      12232   33445554444444444332   3567788777

>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*

Probab=94.76  E-value=0.033  Score=43.84  Aligned_cols=40  Identities=23%  Similarity=0.197  Sum_probs=33.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQAL   66 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~   66 (255)
                      .+++.|+| +|.+|.++++.|.+.|++|.+.+|+++..+++
T Consensus        28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~   67 (215)
T 2vns_A           28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL   67 (215)
T ss_dssp             -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH
T ss_pred             CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            45688998 79999999999999999999999987765544

>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}

Probab=94.75  E-value=0.11  Score=44.40  Aligned_cols=44  Identities=27%  Similarity=0.310  Sum_probs=36.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      ++++++.|.|. |.+|..+++.|++.|++|.+.+|+++..+++.+
T Consensus        20 m~~mkIgiIGl-G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~   63 (358)
T 4e21_A           20 FQSMQIGMIGL-GRMGADMVRRLRKGGHECVVYDLNVNAVQALER   63 (358)
T ss_dssp             --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             hcCCEEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH
Confidence            45678989985 889999999999999999999999877665543

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=94.73  E-value=0.22  Score=43.29  Aligned_cols=71  Identities=15%  Similarity=0.204  Sum_probs=51.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ..|+++|+|+ +.+|+.+++.+.+.|++|++++.++.....   ...   -..+..|..|.+.+.++.++.     ++|+
T Consensus        18 ~~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~---~~a---d~~~~~~~~d~~~l~~~~~~~-----~~d~   85 (433)
T 2dwc_A           18 SAQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAM---QVA---HRSYVGNMMDKDFLWSVVERE-----KPDA   85 (433)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHH---HHS---SEEEESCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhh---hhc---ceEEECCCCCHHHHHHHHHHc-----CCCE
Confidence            3467999988 579999999999999999999877544211   111   124567888888777666542     7999


Q ss_pred             EEE
Q 025252          105 LVN  107 (255)
Q Consensus       105 li~  107 (255)
                      ++.
T Consensus        86 V~~   88 (433)
T 2dwc_A           86 IIP   88 (433)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            886

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-47
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	2e-46
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	4e-46
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	7e-45
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-44
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-43
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	6e-43
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-42
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	5e-42
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	5e-41
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-40
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-40
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	5e-40
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-39
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-39
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-39
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-39
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-39
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	4e-38
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-38
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	6e-38
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	9e-38
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-37
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-37
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	8e-37
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-36
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-35
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	2e-35
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-35
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-35
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-35
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	7e-35
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	1e-34
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	2e-34
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	4e-34
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	1e-33
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-33
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	5e-33
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-33
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-32
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	9e-32
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	1e-31
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	1e-31
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-31
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	3e-31
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-30
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	2e-30
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	4e-30
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	3e-28
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-27
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	5e-27
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	8e-27
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-26
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	8e-24
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	1e-23
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-23
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	6e-21
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-20
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-20
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-17
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	4e-17
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-14
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	1e-13
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	6e-11
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	6e-11
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-10
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-10
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	5e-08
d2blla1	342	c.2.1.2 (A:316-657) Polymyxin resistance protein A	2e-05
d1y1pa1	342	c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo	4e-05
d1udca_	338	c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras	9e-05
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	9e-05
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1orra_	338	c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella	3e-04
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	4e-04
d1i24a_	393	c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1	6e-04
d1oc2a_	346	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	7e-04
d1e5qa1	182	c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase	9e-04
d2iida1	370	c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {M	0.001
d1z45a2	347	c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep	0.001
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d2gv8a1	335	c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monox	0.002
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	0.003
d1sb8a_	341	c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W	0.003

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  154 bits (392), Expect = 4e-47
 Identities = 66/259 (25%), Positives = 107/259 (41%), Gaps = 43/259 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
              G+  ++TGGA GIG + AQ F + GA V + D++   G+ +A+ +G     +   D+
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPE-GKEVAEAIGGA---FFQVDL 57

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +ERE +  V+      G++D+LVN   N       S L     +  R+L VN      +
Sbjct: 58  EDERERVRFVEEAAYALGRVDVLVN---NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           +  AAR M     G I+                       Y  SK G++ L +SLA +L 
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGL-------FAEQENAAYNASKGGLVNLTRSLALDLA 167

Query: 203 RYGIRVDCVS----HTYGLAMAEAIAS-----------------------IANAALYNMA 235
              IRV+ V+     T  +  A A++                        +A A L+ +A
Sbjct: 168 PLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLF-LA 226

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             +  S++    L V+GG 
Sbjct: 227 -SEKASFITGAILPVDGGM 244

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  153 bits (387), Expect = 2e-46
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 37/256 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLGHQDVCYIHCD 81
           RL+ ++A+ITGGA+GIG + A+ F   GA + IAD+      +A    LG + V  + CD
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRR-VLTVKCD 60

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           VS   +V       ++ FG+ DILVN   N      +   +      ++   +N   GFL
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVN---NAGIYPLIPFDELTFEQWKKTFEINVDSGFL 117

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           +AK     M     G I+  T T          L      +Y  +K   +G  ++LA++L
Sbjct: 118 MAKAFVPGMKRNGWGRIINLTSTTY-------WLKIEAYTHYISTKAANIGFTRALASDL 170

Query: 202 GRYGIRVDCVS----------HTYGLAMAEAIAS-------------IANAALYNMAKDD 238
           G+ GI V+ ++           +   AM + + +             +  AA + +A  D
Sbjct: 171 GKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAF-LA-SD 228

Query: 239 DTSYVGKQNLLVNGGF 254
           D S++  Q L V+GG 
Sbjct: 229 DASFITGQTLAVDGGM 244

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  153 bits (387), Expect = 4e-46
 Identities = 103/259 (39%), Positives = 148/259 (57%), Gaps = 36/259 (13%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC-YIHCD 81
           RLQ +VAIITGGA GIG + A+LF + GAKVVIAD+ D+ GQ + + +G  DV  ++HCD
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V+ + +V NLVDTT+AK GKLDI+  +   L    + SIL+    D +R++ +N  G FL
Sbjct: 63  VTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPY-SILEAGNEDFKRVMDINVYGAFL 121

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           VAKHAARVM+P ++G I++T    +             ++ Y  +K  +LGL  SL  EL
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAG------EGVSHVYTATKHAVLGLTTSLCTEL 175

Query: 202 GRYGIRVDCVS------------HTYGLAMAEAIAS--------------IANAALYNMA 235
           G YGIRV+CVS                 +  E +A               +A+A  Y +A
Sbjct: 176 GEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY-LA 234

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             D++ YV   NL+++GG+
Sbjct: 235 -GDESKYVSGLNLVIDGGY 252

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  149 bits (378), Expect = 7e-45
 Identities = 66/269 (24%), Positives = 109/269 (40%), Gaps = 46/269 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-----GHQDVCY 77
           R   +VAIITG ++GIG + A LF + GAKV I        +    ++       Q+V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNS-GCNLEYRGFVSILDTPKSDLERLLAVNT 136
           +  DV+ +     ++ TT+ KFGKLDILVN+ G  +      +         +  L +N 
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVK 195
                + K A    +   +G I+  +   +       GL   P   YY ++K  I    +
Sbjct: 122 RSVIALTKKAVP-HLSSTKGEIVNISSIAS-------GLHATPDFPYYSIAKAAIDQYTR 173

Query: 196 SLAAELGRYGIRVDCVS-------HTYGLAMAEAIAS----------------------- 225
           + A +L ++GIRV+ +S           + M E  +                        
Sbjct: 174 NTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD 233

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           IA    + +A    +SY+    L+V+GG 
Sbjct: 234 IAEVIAF-LADRKTSSYIIGHQLVVDGGS 261

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (373), Expect = 3e-44
 Identities = 66/259 (25%), Positives = 114/259 (44%), Gaps = 42/259 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           R  G+V ++TGG  GIGA   + F  +GA+VVI D  ++ G+AL  +L      +I CDV
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           + E +V  LV  T+ +FG+LD +VN+  +          +T      +LL +N +G + +
Sbjct: 61  TQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQR--PEETSAQGFRQLLELNLLGTYTL 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            K A   +   +   I  ++  G              A  Y  +K  +  + K+LA +  
Sbjct: 119 TKLALPYLRKSQGNVINISSLVGAI--------GQAQAVPYVATKGAVTAMTKALALDES 170

Query: 203 RYGIRVDCVS----------------HTYGLAMAEAIAS-----------IANAALYNMA 235
            YG+RV+C+S                     ++ E + +           +  AA++ +A
Sbjct: 171 PYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVF-LA 229

Query: 236 KDDDTSYVGKQNLLVNGGF 254
              + ++     LLV GG 
Sbjct: 230 --SEANFCTGIELLVTGGA 246

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  144 bits (365), Expect = 4e-43
 Identities = 74/253 (29%), Positives = 105/253 (41%), Gaps = 35/253 (13%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           L G+  IITGGA G+GA AA+     GA+VV+ADV D  G A A +LG     Y H DV+
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVT 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
            E +   +V     +FG +D LVN+         + +         +++ +N  G F+  
Sbjct: 62  IEEDWQRVVAYAREEFGSVDGLVNNAG---ISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           K     M     G I+  +         +          YG SK+G+ GL K  A ELG 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSS-------YGASKWGVRGLSKLAAVELGT 171

Query: 204 YGIRVDCVS---------HTYGLAMAEAIAS-------------IANAALYNMAKDDDTS 241
             IRV+ V             G+   E                 IA A +  +   D +S
Sbjct: 172 DRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVK-LL-SDTSS 229

Query: 242 YVGKQNLLVNGGF 254
           YV    L V+GG+
Sbjct: 230 YVTGAELAVDGGW 242

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  144 bits (365), Expect = 6e-43
 Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 44/268 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-----GHQDVCY 77
           R   +  IITG ++GIG + A LF + GA V I        +     +       + V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSI-LDTPKSDLERLLAVNT 136
           +  DV+ E     ++++T+ +FGK+D+LVN+        F +   D       + L +N 
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 137 IGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
                + K     +V  +   +  ++                   YY ++K  +    +S
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQ-------AQPDFLYYAIAKAALDQYTRS 174

Query: 197 LAAELGRYGIRVDCVSH-------TYGLAMAEAIAS-----------------------I 226
            A +L ++GIRV+ VS        T  + M +  +                        I
Sbjct: 175 TAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHI 234

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           AN  L+ +A  + + Y+  Q+++ +GG 
Sbjct: 235 ANIILF-LADRNLSFYILGQSIVADGGT 261

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  143 bits (361), Expect = 2e-42
 Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 44/267 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----HQDVCY 77
           R  G+  IITG ++GIG SAA +F K GA+V I    ++  +    ++       + +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DV+      ++++TT+AKFGK+DILVN+       G  +  D P    ++   +N  
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGT-ANTDQPVELYQKTFKLNFQ 119

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
               + +     ++  +   +  ++              +    YY  +K  +    +  
Sbjct: 120 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQ-------AHSGYPYYACAKAALDQYTRCT 172

Query: 198 AAELGRYGIRVDCVS---------------HTYGLAMAEAIAS---------------IA 227
           A +L ++G+RV+ VS                T    +   I S               IA
Sbjct: 173 AIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIA 232

Query: 228 NAALYNMAKDDDTSYVGKQNLLVNGGF 254
           N  ++ +A  + +SY+  Q+++ +GG 
Sbjct: 233 NIIVF-LADRNLSSYIIGQSIVADGGS 258

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  141 bits (357), Expect = 5e-42
 Identities = 74/258 (28%), Positives = 110/258 (42%), Gaps = 38/258 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCYIHCD 81
           RL G+VAIITGG  GIG + A  F + GAKV+I     ++G+  A  +G  D + +   D
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            S+E     L D T   FG +  LVN   N       S+ +T  ++  +LLAVN  G F 
Sbjct: 63  SSDEDGWTKLFDATEKAFGPVSTLVN---NAGIAVNKSVEETTTAEWRKLLAVNLDGVFF 119

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAAE 200
             +   + M  +  G  +    +       IEG    P    Y  SK  +  + KS A +
Sbjct: 120 GTRLGIQRMKNKGLGASIINMSS-------IEGFVGDPSLGAYNASKGAVRIMSKSAALD 172

Query: 201 --LGRYGIRVDCVSHTY-------GLAMAEAIAS---------------IANAALYNMAK 236
             L  Y +RV+ V   Y        L  AE   S               IA   +Y +A 
Sbjct: 173 CALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVY-LA- 230

Query: 237 DDDTSYVGKQNLLVNGGF 254
            +++ +      +V+GG+
Sbjct: 231 SNESKFATGSEFVVDGGY 248

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  140 bits (355), Expect = 5e-41
 Identities = 56/251 (22%), Positives = 94/251 (37%), Gaps = 32/251 (12%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQALADKLG---HQD 74
           R  GRV ++TG   G+G + A  F + GA VV+ D+  +      G + ADK+     + 
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 75  VCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAV 134
                 +  +      LV T +  FG++D++V    N       S       D + +  V
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVV---NNAGILRDRSFSRISDEDWDIIQRV 120

Query: 135 NTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
           +  G F V + A   M  +  G I+ T          I G        Y  +K G+LGL 
Sbjct: 121 HLRGSFQVTRAAWDHMKKQNYGRIIMTASASG-----IYGNFGQAN--YSAAKLGLLGLA 173

Query: 195 KSLAAELGRYGIRVDCVSHTYGLAMAEAIAS-----------IANAALYNMAKDDDTSYV 243
            +L  E  +  I  + ++   G  M E +             +A   L+ +    ++   
Sbjct: 174 NTLVIEGRKNNIHCNTIAPNAGSRMTETVMPEDLVEALKPEYVAPLVLW-LC--HESCEE 230

Query: 244 GKQNLLVNGGF 254
                 V  G+
Sbjct: 231 NGGLFEVGAGW 241

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  138 bits (348), Expect = 1e-40
 Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 37/253 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL+ +  +ITG A GIG +  +LF K GA++V  D+++   +  A+ +G      +  DV
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH---PVVMDV 58

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           ++   V       +A  G+LD +V+                P  D E +L VN  G FLV
Sbjct: 59  ADPASVERGFAEALAHLGRLDGVVH---YAGITRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           AK A+  M  +  G I+ T                +    Y  S  G++GL ++LA ELG
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGN--------LGQANYAASMAGVVGLTRTLALELG 167

Query: 203 RYGIRVDCVS----------HTYGLAMAEAIAS-----------IANAALYNMAKDDDTS 241
           R+GIRV+ ++                  +AIA+           +A AAL+ ++  D++S
Sbjct: 168 RWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFLLS--DESS 225

Query: 242 YVGKQNLLVNGGF 254
           ++  Q L V+GG 
Sbjct: 226 FITGQVLFVDGGR 238

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  137 bits (345), Expect = 3e-40
 Identities = 77/248 (31%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+VA+++GGA G+GAS  +     GAKVV  D+ D  G+A+A +L      Y+H DV
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADA-ARYVHLDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +   +    VDT V  FG L +LVN   N       +I D   ++ +R+L VN  G FL 
Sbjct: 62  TQPAQWKAAVDTAVTAFGGLHVLVN---NAGILNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +   + M    RG I+          +       +  + Y  +KF + GL KS A ELG
Sbjct: 119 IRAVVKPMKEAGRGSIINI-------SSIEGLAGTVACHGYTATKFAVRGLTKSTALELG 171

Query: 203 RYGIRVDCVSHTY-----GLAMAEAIAS-----------IANAALYNMAKDDDTSYVGKQ 246
             GIRV+ +            + E I             ++N  +Y +A  D++SY    
Sbjct: 172 PSGIRVNSIHPGLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVY-LA-SDESSYSTGA 229

Query: 247 NLLVNGGF 254
             +V+GG 
Sbjct: 230 EFVVDGGT 237

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 5e-40
 Identities = 67/264 (25%), Positives = 109/264 (41%), Gaps = 45/264 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-------GHQDV 75
            LQG+VAI+TGGA+GIG +  +   + G+ VVIA  +    ++ AD+L           V
Sbjct: 9   LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 68

Query: 76  CYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
             I C++ NE EV NLV +T+  FGK++ LVN   N   +               +L  N
Sbjct: 69  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVN---NGGGQFLSPAEHISSKGWHAVLETN 125

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
             G F + K      +    G I+                    A + G ++ G+  L K
Sbjct: 126 LTGTFYMCKAVYSSWMKEHGGSIVN--------IIVPTKAGFPLAVHSGAARAGVYNLTK 177

Query: 196 SLAAELGRYGIRVDCVS-------------HTYGLAMAEAIAS------------IANAA 230
           SLA E    GIR++CV+              ++G +  E                +++  
Sbjct: 178 SLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVV 237

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
            + +      S++  Q++ V+GG 
Sbjct: 238 CF-LL-SPAASFITGQSVDVDGGR 259

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 2e-39
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 16/198 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYI 78
           R + R+A++TG + GIGA+ A+   + G KVV         + LA +         +   
Sbjct: 7   RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPY 66

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CD+SNE +++++     ++   +DI +N   N       ++L    S  + +  VN + 
Sbjct: 67  RCDLSNEEDILSMFSAIRSQHSGVDICIN---NAGLARPDTLLSGSTSGWKDMFNVNVLA 123

Query: 139 GFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKS 196
             +  + A + M  R    G I+               L     ++Y  +K+ +  L + 
Sbjct: 124 LSICTREAYQSMKERNVDDGHIININSMSG-----HRVLPLSVTHFYSATKYAVTALTEG 178

Query: 197 LAAEL--GRYGIRVDCVS 212
           L  EL   +  IR  C+S
Sbjct: 179 LRQELREAQTHIRATCIS 196

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (340), Expect = 2e-39
 Identities = 56/255 (21%), Positives = 93/255 (36%), Gaps = 40/255 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            L GR  ++TG   GIG    Q  H  GA+VV          +L  +     +  +  D+
Sbjct: 4   FLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +        +  +   G +D+LVN   N         L+  K   +R   VN      V
Sbjct: 62  GDWEA----TERALGSVGPVDLLVN---NAAVALLQPFLEVTKEAFDRSFEVNLRAVIQV 114

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           ++  AR ++ R     +    +  +             + Y  +K  +  L K +A ELG
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQCSQ------RAVTNHSVYCSTKGALDMLTKVMALELG 168

Query: 203 RYGIRVDCVSHTYGL-AMAEAIAS----------------------IANAALYNMAKDDD 239
            + IRV+ V+ T  + +M +A  S                      + NA L+ ++  D 
Sbjct: 169 PHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLS--DR 226

Query: 240 TSYVGKQNLLVNGGF 254
           +       L V GGF
Sbjct: 227 SGMTTGSTLPVEGGF 241

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  135 bits (342), Expect = 2e-39
 Identities = 62/264 (23%), Positives = 93/264 (35%), Gaps = 42/264 (15%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           +L+G   +ITGGASG+G +    F   GAKV + D        L    G   V  I  DV
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDN-VLGIVGDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD--LERLLAVNTIGGF 140
            +  +        VA+FGK+D L+ +    +Y   +  L     D   + +  +N  G  
Sbjct: 61  RSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYI 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
              K     +V  R   I   +  G           N     Y  +K  I+GLV+ LA E
Sbjct: 121 HAVKACLPALVASRGNVIFTISNAGFYP--------NGGGPLYTAAKHAIVGLVRELAFE 172

Query: 201 LGRY---------GIRVDCVSHTYGLAMAEAIAS---------------------IANAA 230
           L  Y         GI  D    +     ++AI++                        A 
Sbjct: 173 LAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAY 232

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           ++  A   D +      L  +GG 
Sbjct: 233 VF-FATRGDAAPATGALLNYDGGL 255

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  134 bits (339), Expect = 3e-39
 Identities = 54/261 (20%), Positives = 95/261 (36%), Gaps = 37/261 (14%)

Query: 19  SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVC 76
           S  + L+ +  ++TGG  GIG +  + F   GA +      +        K   +   V 
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60

Query: 77  YIHCDVSNEREVINLVDTTVAKF-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVN 135
              CD S   E   L+ T  + F GKLDIL+N   NL        LD    D    ++ N
Sbjct: 61  GSVCDASLRPEREKLMQTVSSMFGGKLDILIN---NLGAIRSKPTLDYTAEDFSFHISTN 117

Query: 136 TIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
               + +++ A  ++     G I++ +            +     + Y  +K  +  L +
Sbjct: 118 LESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-------VSASVGSIYSATKGALNQLAR 170

Query: 196 SLAAELGRYGIRVDCVS----------HTYGLAMAEAIAS------------IANAALYN 233
           +LA E    GIR + V+            Y     + + S            +++   + 
Sbjct: 171 NLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFL 230

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
                  SY+  Q + V+GG 
Sbjct: 231 CM--PAASYITGQTICVDGGL 249

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  134 bits (339), Expect = 4e-39
 Identities = 53/257 (20%), Positives = 91/257 (35%), Gaps = 30/257 (11%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIH 79
               +  I+TGG  GIG +  +     GA V +          + +K+G +         
Sbjct: 6   SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDVSN   V   +    A  G +  L+    N          +    D   +  VN  G 
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIA---NAGVSVVKPATELTHEDFAFVYDVNVFGV 122

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLA 198
           F   +  A++ + +++   +  T + ++       L       +Y  SK     LVK LA
Sbjct: 123 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 182

Query: 199 AELGRYGIRVDCVSHTYGL---------AMAEAIAS------------IANAALYNMAKD 237
           AE    GIRV+ +S  Y            + +  AS            +   A+  ++  
Sbjct: 183 AEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILLLS-- 240

Query: 238 DDTSYVGKQNLLVNGGF 254
           D  +Y+      ++GG 
Sbjct: 241 DHATYMTGGEYFIDGGQ 257

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  131 bits (331), Expect = 4e-38
 Identities = 47/196 (23%), Positives = 75/196 (38%), Gaps = 17/196 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHC 80
            + G + +ITG   GIG   A  F K  +K+V+ D+  +  +  A K       V     
Sbjct: 4   SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D SN  ++ +      A+ G + ILVN+   +       +  T    +E+   VN +  F
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVV---YTSDLFATQDPQIEKTFEVNVLAHF 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLAA 199
              K     M     G I+              G  ++P    Y  SKF  +G  K+L  
Sbjct: 121 WTTKAFLPAMTKNNHGHIVTVASAA--------GHVSVPFLLAYCSSKFAAVGFHKTLTD 172

Query: 200 ELGRY---GIRVDCVS 212
           EL      G++  C+ 
Sbjct: 173 ELAALQITGVKTTCLC 188

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  131 bits (330), Expect = 4e-38
 Identities = 56/256 (21%), Positives = 99/256 (38%), Gaps = 42/256 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
              G  A++TG   GIG    +  H +GAKVV     ++   +LA +     +  +  D+
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDL 59

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
            +     +  +  +   G +D+LVN   N         L+  K   +R  +VN    F V
Sbjct: 60  GDW----DATEKALGGIGPVDLLVN---NAALVIMQPFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 143 AKHAARVMVPR-RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           ++  AR M+ R   G I+  +            +       Y  +K  +  L K++A EL
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVA-------HVTFPNLITYSSTKGAMTMLTKAMAMEL 165

Query: 202 GRYGIRVDCVSHTYGL-----------AMAEAIAS------------IANAALYNMAKDD 238
           G + IRV+ V+ T  L             A  +              + N+ L+ +   D
Sbjct: 166 GPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF-LL-SD 223

Query: 239 DTSYVGKQNLLVNGGF 254
            ++      +LV+ G+
Sbjct: 224 RSASTSGGGILVDAGY 239

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  131 bits (331), Expect = 6e-38
 Identities = 54/262 (20%), Positives = 91/262 (34%), Gaps = 41/262 (15%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC--YIH 79
           + L+G  A++TGG+ GIG    +     GA V               +   +        
Sbjct: 4   WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASV 63

Query: 80  CDVSNEREVINLVDTTVAKF-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CD+S+  E   L++T    F GKL+ILVN   N     +    D    D   ++++N   
Sbjct: 64  CDLSSRSERQELMNTVANHFHGKLNILVN---NAGIVIYKEAKDYTVEDYSLIMSINFEA 120

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            + ++  A   +    RG +++ +            L       YG +K  +  L + LA
Sbjct: 121 AYHLSVLAHPFLKASERGNVVFISSVSGA-------LAVPYEAVYGATKGAMDQLTRCLA 173

Query: 199 AELGRYGIRVDCVS------------------HTYGLAMAEAIAS--------IANAALY 232
            E  +  IRV+ V                         + +  A         +A    +
Sbjct: 174 FEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAF 233

Query: 233 NMAKDDDTSYVGKQNLLVNGGF 254
                   SYV  Q + V+GG 
Sbjct: 234 LCF--PAASYVTGQIIYVDGGL 253

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  130 bits (329), Expect = 9e-38
 Identities = 61/260 (23%), Positives = 104/260 (40%), Gaps = 42/260 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RLQG+VA++TGGASG+G    +L    GAKV  +D+ +  GQ LA +LG +   ++  DV
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGER-SMFVRHDV 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+E +   ++     + G L++LVN   N        +      D  RLL +NT   F+ 
Sbjct: 62  SSEADWTLVMAAVQRRLGTLNVLVN---NAGILLPGDMETGRLEDFSRLLKINTESVFIG 118

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +     M       I   + +      +  G        Y  SK  +  L ++ A    
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAG--------YSASKAAVSALTRAAALSCR 170

Query: 203 R--YGIRVDCVS----------HTYGLAMAEAIAS----------------IANAALYNM 234
           +  Y IRV+ +            +    +++ +                  IA   L+ +
Sbjct: 171 KQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLF-L 229

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
           A  D++S +    L  +   
Sbjct: 230 A-SDESSVMSGSELHADNSI 248

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  129 bits (326), Expect = 4e-37
 Identities = 51/275 (18%), Positives = 97/275 (35%), Gaps = 50/275 (18%)

Query: 16  PTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--H 72
           P       L+G+VA++TG   GIG   A    + G KV++         + +   +    
Sbjct: 8   PLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNG 67

Query: 73  QDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLL 132
            D   +  +V    +++ + +  V  FGKLDI+ ++        F  + D    + +R+ 
Sbjct: 68  SDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSG---VVSFGHVKDVTPEEFDRVF 124

Query: 133 AVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILG 192
            +NT G F VA+ A + +    R  ++             +         Y  SK  I  
Sbjct: 125 TINTRGQFFVAREAYKHLEIGGRLILMG--------SITGQAKAVPKHAVYSGSKGAIET 176

Query: 193 LVKSLAAELGRYGIRVDCVS-HTYGLAMAEAIAS-------------------------- 225
             + +A ++    I V+ V+       M  A+                            
Sbjct: 177 FARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR 236

Query: 226 -------IANAALYNMAKDDDTSYVGKQNLLVNGG 253
                  IA    + +A  +D  +V  + + ++GG
Sbjct: 237 RVGLPIDIARVVCF-LA-SNDGGWVTGKVIGIDGG 269

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  129 bits (325), Expect = 4e-37
 Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 37/259 (14%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYI 78
           + L+GRVA++TGG+ G+G   AQ   + G  VV+A          A KL  +   +    
Sbjct: 1   FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            CDVSN  EV  L++    KFGKLD +VN              + P  +  +++ VN  G
Sbjct: 61  RCDVSNYEEVKKLLEAVKEKFGKLDTVVN---AAGINRRHPAEEFPLDEFRQVIEVNLFG 117

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            + V + A  ++                     +E +     + Y  SK G+  L K+LA
Sbjct: 118 TYYVCREAFSLL------RESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALA 171

Query: 199 AELGRYGIRVDCVSHTYGL-AMAEAIAS----------------------IANAALYNMA 235
            E GRYGIRV+ ++  +    M EA+ S                      +   A++ +A
Sbjct: 172 KEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVF-LA 230

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             ++  YV  Q + V+GG+
Sbjct: 231 -SEEAKYVTGQIIFVDGGW 248

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  128 bits (322), Expect = 8e-37
 Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 37/253 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+  ++TG ASGIG +A  LF + GA +V  D ++ L       L   +   +  DV
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           S+ + V  +    + +FG+L  + +              + P    E++L VN  G FLV
Sbjct: 61  SDPKAVEAVFAEALEEFGRLHGVAHFAGVA---HSALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
           A+ A  V+       +             + GL      +Y   K G++GL ++LA EL 
Sbjct: 118 ARKAGEVLEEGGSLVL----------TGSVAGLGAFGLAHYAAGKLGVVGLARTLALELA 167

Query: 203 RYGIRVDCVS----------HTYGLAMAEAIAS-----------IANAALYNMAKDDDTS 241
           R G+RV+ +                A  + + +           +A AAL+ ++  ++++
Sbjct: 168 RKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFLLS--EESA 225

Query: 242 YVGKQNLLVNGGF 254
           Y+  Q L V+GG 
Sbjct: 226 YITGQALYVDGGR 238

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  127 bits (320), Expect = 2e-36
 Identities = 50/263 (19%), Positives = 95/263 (36%), Gaps = 42/263 (15%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVC--YIH 79
           + L+G  A++TGG+ GIG +  +     GA+V      +       +    + +      
Sbjct: 2   WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSV 61

Query: 80  CDVSNEREVINLVDTTVAKF-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
           CD+ +  E   L+ T    F GKL+ILVN   N          D  + D   ++  N   
Sbjct: 62  CDLLSRTERDKLMQTVAHVFDGKLNILVN---NAGVVIHKEAKDFTEKDYNIIMGTNFEA 118

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            + +++ A  ++   + G +++ +     +            + Y  SK  I  + KSLA
Sbjct: 119 AYHLSQIAYPLLKASQNGNVIFLSSIAGFS-------ALPSVSLYSASKGAINQMTKSLA 171

Query: 199 AELGRYGIRVDCVS---------------HTYGLAMAEAIAS------------IANAAL 231
            E  +  IRV+ V+               + +     +                ++    
Sbjct: 172 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 231

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           +        SY+  Q +  +GGF
Sbjct: 232 FLCF--PAASYITGQIIWADGGF 252

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  125 bits (314), Expect = 1e-35
 Identities = 54/257 (21%), Positives = 106/257 (41%), Gaps = 35/257 (13%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYI 78
           YY  + +VA++TG   GIG   A++  K+ + V+          ++ D++     +    
Sbjct: 5   YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGY 64

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS + E+  +++  + +   +DILVN+        F+ + +    + E +L  N   
Sbjct: 65  AGDVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKN---DEWEDVLRTNLNS 121

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            F + +  ++ M+  R G I+  +         + G        Y  SK G++G  KSLA
Sbjct: 122 LFYITQPISKRMINNRYGRIINISSIVG-----LTGNVGQAN--YSSSKAGVIGFTKSLA 174

Query: 199 AELGRYGIRVDCVS---------HTYGLAMAEAIAS------------IANAALYNMAKD 237
            EL    I V+ ++               + + I S            +AN A +  +  
Sbjct: 175 KELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFLSS-- 232

Query: 238 DDTSYVGKQNLLVNGGF 254
           D + Y+  +  +++GG 
Sbjct: 233 DKSGYINGRVFVIDGGL 249

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  125 bits (314), Expect = 2e-35
 Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 37/255 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
           RL G+ AIITG  +GIG   A  F   GA VV++D+  +    + D++           C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+++E+E+  L D  ++K GK+DILVN+       G     D P +D  R   +N    F
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGG----GGPKPFDMPMADFRRAYELNVFSFF 123

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            +++  A  M     G IL          +      NI    Y  SK     LV+++A +
Sbjct: 124 HLSQLVAPEMEKNGGGVILTI-------TSMAAENKNINMTSYASSKAAASHLVRNMAFD 176

Query: 201 LGRYGIRVDCVS----------HTYGLAMAEAIAS------------IANAALYNMAKDD 238
           LG   IRV+ ++                + + +              IANAAL+ +    
Sbjct: 177 LGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALF-LC-SP 234

Query: 239 DTSYVGKQNLLVNGG 253
             S+V  Q L V+GG
Sbjct: 235 AASWVSGQILTVSGG 249

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  126 bits (316), Expect = 2e-35
 Identities = 53/259 (20%), Positives = 90/259 (34%), Gaps = 38/259 (14%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
             QG+VA ITGG +G+G     L    GA+ VIA  + ++ +A A+++       V  I 
Sbjct: 22  SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQ 81

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
           CDV +   V N V   +   G  +I++N+                 +  + +  +   G 
Sbjct: 82  CDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTE---RLSPNAWKTITDIVLNGT 138

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
                         +           T          +        +K G+  + KSLAA
Sbjct: 139 A--FVTLEIGKQLIKAQKGAAFLSITTIYAE----TGSGFVVPSASAKAGVEAMSKSLAA 192

Query: 200 ELGRYGIRVDCVSHTY-------------GLAMAEAIAS-----------IANAALYNMA 235
           E G+YG+R + +                 G    E I             +AN A + + 
Sbjct: 193 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAF-LC 251

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             D  S++    +  +GG 
Sbjct: 252 -SDYASWINGAVIKFDGGE 269

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  124 bits (311), Expect = 3e-35
 Identities = 62/253 (24%), Positives = 110/253 (43%), Gaps = 34/253 (13%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
            +G++A++TG + GIG + A+     GAKV+     +N  QA++D LG  +   +  +V+
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVT 60

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +   + ++++   A+FG++DILVN+         +        +   ++  N    F ++
Sbjct: 61  DPASIESVLEKIRAEFGEVDILVNNAGITRDNLLM---RMKDEEWNDIIETNLSSVFRLS 117

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           K   R M+ +R G I+              G        Y  +K G++G  KSLA E+  
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVG-----TMGNGGQAN--YAAAKAGLIGFSKSLAREVAS 170

Query: 204 YGIRVDCVS---------HTYGLAMAEAIAS------------IANAALYNMAKDDDTSY 242
            GI V+ V+                   I +            IANA  + +A  D+ +Y
Sbjct: 171 RGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAF-LA-SDEAAY 228

Query: 243 VGKQNLLVNGGFR 255
           +  + L VNGG  
Sbjct: 229 ITGETLHVNGGMY 241

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  123 bits (310), Expect = 5e-35
 Identities = 59/263 (22%), Positives = 90/263 (34%), Gaps = 44/263 (16%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVS 83
             VA++TG  SGIG   A+   K G +V +    +   +    +L     +     CDV 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +  E+  LV   V ++G +D+LV    N    G  +  +        ++  N  G F V 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLV---NNAGRPGGGATAELADELWLDVVETNLTGVFRVT 118

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           K   +      RG         T           + A  Y  SK G++G  K+L  EL R
Sbjct: 119 KQVLKAGGMLERGTGRIVNIASTGGKQ-----GVVHAAPYSASKHGVVGFTKALGLELAR 173

Query: 204 YGIRVDCVS-----------------HTYGLAMAEAIAS---------------IANAAL 231
            GI V+ V                    + ++  EA                  +A    
Sbjct: 174 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVA 233

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +      + V  Q L V GG 
Sbjct: 234 Y-LI-GPGAAAVTAQALNVCGGL 254

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  123 bits (310), Expect = 7e-35
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 37/260 (14%)

Query: 21  YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG--HQDVCY 77
           Y  L+G+V +ITG ++G+G S A  F    AKVV+    +++   ++ +++     +   
Sbjct: 2   YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           +  DV+ E +VINLV + + +FGKLD+++N   N      VS  +   SD  +++  N  
Sbjct: 62  VKGDVTVESDVINLVQSAIKEFGKLDVMIN---NAGLENPVSSHEMSLSDWNKVIDTNLT 118

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G FL ++ A +              GT     +  E +      +Y  SK G+  + ++L
Sbjct: 119 GAFLGSREAIKYF------VENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETL 172

Query: 198 AAELGRYGIRVDCVS--------HTYGLAMAEAIAS---------------IANAALYNM 234
           A E    GIRV+ +         +    A  E  A                IA  A + +
Sbjct: 173 ALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAW-L 231

Query: 235 AKDDDTSYVGKQNLLVNGGF 254
           A   + SYV    L  +GG 
Sbjct: 232 A-SSEASYVTGITLFADGGM 250

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  123 bits (309), Expect = 1e-34
 Identities = 63/266 (23%), Positives = 108/266 (40%), Gaps = 46/266 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYI 78
           R   RV +ITGG SG+G + A      GAK+ + DV     +A    +       +V   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DVS+E +V   V  T  +FG++D   N+      +          ++ ++++++N  G
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNP--TESFTAAEFDKVVSINLRG 118

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSL 197
            FL  +   ++M  +  G ++ T   G        G+  I   + Y  +K G++GL ++ 
Sbjct: 119 VFLGLEKVLKIMREQGSGMVVNTASVG--------GIRGIGNQSGYAAAKHGVVGLTRNS 170

Query: 198 AAELGRYGIRVDCVSHTY-----------------GLAMAEAIAS------------IAN 228
           A E GRYGIR++ ++                        AE                IA 
Sbjct: 171 AVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA 230

Query: 229 AALYNMAKDDDTSYVGKQNLLVNGGF 254
              + +   DD SYV    + ++GG 
Sbjct: 231 VVAF-LL-SDDASYVNATVVPIDGGQ 254

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 2e-34
 Identities = 61/259 (23%), Positives = 111/259 (42%), Gaps = 45/259 (17%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+V I+T  A GIG +AA  F + GAKV+  D+ ++  Q L    G Q         
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK 62

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
               +  N V+       +LD+L N      +    ++LD  + D +  + +N    +L+
Sbjct: 63  KQIDQFANEVE-------RLDVLFN---VAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            K     M+ ++ G I+      ++  + ++G+ N     Y  +K  ++GL KS+AA+  
Sbjct: 113 IKAFLPKMLAQKSGNIINM----SSVASSVKGVVNRCV--YSTTKAAVIGLTKSVAADFI 166

Query: 203 RYGIRVDCVSHTY----------------GLAMAEAIAS-----------IANAALYNMA 235
           + GIR +CV                      A  + +             IA   +Y  +
Sbjct: 167 QQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLAS 226

Query: 236 KDDDTSYVGKQNLLVNGGF 254
             D+++YV    ++++GG+
Sbjct: 227 --DESAYVTGNPVIIDGGW 243

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  121 bits (305), Expect = 4e-34
 Identities = 56/267 (20%), Positives = 100/267 (37%), Gaps = 50/267 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLG--HQDVCYIHC 80
           L G+VA+ TG   GIG   A    + GA VV+         + +  +L         I  
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+S   EV+ L D  V+ FG LD ++++        +   L+  +   +++  +NT G F
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSG---MEVWCDELEVTQELFDKVFNLNTRGQF 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            VA+   +     RRG  +  T +     T I          Y  SK  + G  ++ A +
Sbjct: 121 FVAQQGLKHC---RRGGRIILTSSIAAVMTGIPNHA-----LYAGSKAAVEGFCRAFAVD 172

Query: 201 LGRYGIRVDCVS----------------------HTYGLAMAEAIAS------------I 226
            G  G+ V+C++                            + E +A+            I
Sbjct: 173 CGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADI 232

Query: 227 ANAALYNMAKDDDTSYVGKQNLLVNGG 253
             A    +   +++ ++  Q + + GG
Sbjct: 233 GRAVSA-LC-QEESEWINGQVIKLTGG 257

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  120 bits (302), Expect = 1e-33
 Identities = 61/263 (23%), Positives = 107/263 (40%), Gaps = 44/263 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
           RL G+ A+ITG A GIG + A+ + + GA+V IAD+     +A A ++G    C I  DV
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG-PAACAIALDV 60

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLV 142
           +++  +   V   + ++G +DILVN+           I++  +   +RL A+N  G   +
Sbjct: 61  TDQASIDRCVAELLDRWGSIDILVNNAA---LFDLAPIVEITRESYDRLFAINVSGTLFM 117

Query: 143 AKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG 202
            +  AR M+   RG  +    +         G   +       +K  ++ L +S    L 
Sbjct: 118 MQAVARAMIAGGRGGKIINMAS----QAGRRGEALVGVYCA--TKAAVISLTQSAGLNLI 171

Query: 203 RYGIRVDCVS-----------------HTYGLAMAEAIAS---------------IANAA 230
           R+GI V+ ++                     L   E                   +   A
Sbjct: 172 RHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMA 231

Query: 231 LYNMAKDDDTSYVGKQNLLVNGG 253
           ++ +A   +  Y+  Q   V+GG
Sbjct: 232 IF-LA-TPEADYIVAQTYNVDGG 252

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  120 bits (302), Expect = 1e-33
 Identities = 45/255 (17%), Positives = 79/255 (30%), Gaps = 44/255 (17%)

Query: 29  AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV 88
           AI+T      G  +A    + G  V   D          D+L      Y      +E+E 
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHD----ESFKQKDELEAFAETYPQLKPMSEQEP 58

Query: 89  INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR 148
             L++   + +G++D+LV++        F  I      D    +    I  F +    A 
Sbjct: 59  AELIEAVTSAYGQVDVLVSNDIFA--PEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRV 208
            M  R+ G I++         +          + Y  ++ G   L  +L+ ELG Y I V
Sbjct: 117 QMKKRKSGHIIFI-------TSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPV 169

Query: 209 DCVS-------HTYGLAMAEAIAS----------------------IANAALYNMAKDDD 239
             +         +      E   +                      +     + +A    
Sbjct: 170 FAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAF-LA-SGS 227

Query: 240 TSYVGKQNLLVNGGF 254
             Y+  Q   + GGF
Sbjct: 228 CDYLTGQVFWLAGGF 242

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  118 bits (297), Expect = 5e-33
 Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 50/270 (18%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHC 80
           +  G+V ++TG    IG + A    + G  + + D+     +     +  +  +     C
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVC 61

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           DV++E  VI  VD+ V  FGK+D             F  + D P  D  R+L +N  G F
Sbjct: 62  DVTSEEAVIGTVDSVVRDFGKIDF--LFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAF 119

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
            V K  +R M+ +  G I+ T                     YG SK  I+ L ++ A +
Sbjct: 120 HVLKAVSRQMITQNYGRIVNTASMAGV-------KGPPNMAAYGTSKGAIIALTETAALD 172

Query: 201 LGRYGIRVDCVS-------------------------HTYGLAMAEAIAS---------- 225
           L  Y IRV+ +S                          T    +A+ +            
Sbjct: 173 LAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDI 232

Query: 226 --IANAALYNMAKDDDTSYVGKQNLLVNGG 253
             I     + +   DD+S++   NL + GG
Sbjct: 233 NEIPGVVAF-LL-GDDSSFMTGVNLPIAGG 260

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  117 bits (295), Expect = 6e-33
 Identities = 44/253 (17%), Positives = 94/253 (37%), Gaps = 47/253 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
           ++ +  ++   + GIG + A +  + GA+V I    + L +    +       Y+ CD+ 
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-------YVVCDLR 54

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
            +      +D    K  ++DILV +    +   F    +    D +  +    +    + 
Sbjct: 55  KD------LDLLFEKVKEVDILVLNAGGPKAGFF---DELTNEDFKEAIDSLFLNMIKIV 105

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           ++    M  +  G I+  T     +  E              ++  + G +K+L+ E+  
Sbjct: 106 RNYLPAMKEKGWGRIVAITSFSVISPIENLY-------TSNSARMALTGFLKTLSFEVAP 158

Query: 204 YGIRVDCVS----------HTYGLAMAEAIAS------------IANAALYNMAKDDDTS 241
           YGI V+CV+                  + + S            IA+   +  +  +  S
Sbjct: 159 YGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCS--EKAS 216

Query: 242 YVGKQNLLVNGGF 254
           Y+  Q ++V+GG 
Sbjct: 217 YLTGQTIVVDGGL 229

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  116 bits (291), Expect = 4e-32
 Identities = 57/263 (21%), Positives = 91/263 (34%), Gaps = 47/263 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSN 84
           +VA++TG   GIG + A    K+G  V IAD  D   +A+A ++         +  DVS+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
             +V   V+      G  D++V    N        I       ++++  +N  G     +
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIV---NNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQ 118

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY-YGVSKFGILGLVKSLAAELGR 203
            A         G  +              G    P    Y  SKF + GL ++ A +L  
Sbjct: 119 AAVEAFKKEGHGGKIIN-------ACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAP 171

Query: 204 YGIRVDCVSH---------------------TYGLAMAEAIAS-----------IANAAL 231
            GI V+                           G   AE               +A    
Sbjct: 172 LGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVS 231

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           Y +A   D+ Y+  Q+LL++GG 
Sbjct: 232 Y-LA-SPDSDYMTGQSLLIDGGM 252

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  114 bits (287), Expect = 9e-32
 Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 32/248 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAK-------VVIADVQDNLGQALADKLG--HQDVCY 77
            + +ITG   GIG + A  F +           +V++       + ++ +          
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
           I  D+S+  +V  L    V ++G +D LVN   N     F ++ D  + D +  +  N  
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVN---NAGVGRFGALSDLTEEDFDYTMNTNLK 118

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G F + +    +M  +  G I + T    T         +     Y +SKFG  GLV+++
Sbjct: 119 GTFFLTQALFALMERQHSGHIFFITSVAATK-----AFRHSSI--YCMSKFGQRGLVETM 171

Query: 198 AAELGRYGIRVDCVSHTYGL-AMAEAIAS-----------IANAALYNMAKDDDTSYVGK 245
                +  +R+  V        M   +             IA   +         + V +
Sbjct: 172 RLYARKCNVRITDVQPGAVYTPMWGKVDDEMQALMMMPEDIAAPVVQ-AYLQPSRTVVEE 230

Query: 246 QNLLVNGG 253
             L    G
Sbjct: 231 IILRPTSG 238

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  115 bits (288), Expect = 1e-31
 Identities = 56/264 (21%), Positives = 97/264 (36%), Gaps = 54/264 (20%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYIHCD 81
           G+VA++TG A GIG + A+     GAKV + D     G      L      Q   +I CD
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
           V++++++ +     V  FG+LDILVN+                + + E+ L +N +    
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAG-----------VNNEKNWEKTLQINLVSVIS 111

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK--SLAA 199
                   M  +  G         + A   +  +   P   Y  SK GI+G  +  +LAA
Sbjct: 112 GTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPVAQQPV--YCASKHGIVGFTRSAALAA 167

Query: 200 ELGRYGIRVDCVSHTY-----------------GLAMAEAIAS------------IANAA 230
            L   G+R++ +   +                  +   + I              IAN  
Sbjct: 168 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 227

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
           +  + +DD    +    + +    
Sbjct: 228 IT-LIEDD---ALNGAIMKITTSK 247

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  114 bits (287), Expect = 1e-31
 Identities = 37/257 (14%), Positives = 71/257 (27%), Gaps = 43/257 (16%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ---DVCYIH 79
            L  +  I      GIG   ++   K   K  +   +     ALA+        ++ +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 80  CDVSNERE-VINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
            DV+        L+     +   +DIL+N    L+              +ER +A+N  G
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDD-----------HQIERTIAINFTG 110

Query: 139 GFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVK 195
                         R     G I                +  +P   Y  SK  ++    
Sbjct: 111 LVNTTTAILDFWDKRKGGPGGIIANICSVTG-----FNAIHQVPV--YSASKAAVVSFTN 163

Query: 196 SLAAELGRYGIRVDCVS-----------HTYGLAMAEAIASIANAALYNMAKD------- 237
           SLA      G+    ++               L +   +A +  +     ++        
Sbjct: 164 SLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVK 223

Query: 238 DDTSYVGKQNLLVNGGF 254
              +        ++ G 
Sbjct: 224 AIEANKNGAIWKLDLGT 240

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  114 bits (286), Expect = 2e-31
 Identities = 52/251 (20%), Positives = 97/251 (38%), Gaps = 35/251 (13%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSN 84
           V ++TG + GIG + A    K G KV++   +     + ++ ++            DVS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
           E +V  ++ T +  +G +D       N        ++   KS  + ++ +N  G FL  +
Sbjct: 63  EADVEAMMKTAIDAWGTID---VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
            A ++M+ +R+G I+            + G        Y  +K G++G  K+ A E    
Sbjct: 120 AATKIMMKKRKGRIINIASVVG-----LIGNIGQAN--YAAAKAGVIGFSKTAAREGASR 172

Query: 205 GIRVDCVSHTY---------GLAMAEAIAS------------IANAALYNMAKDDDTSYV 243
            I V+ V   +         G  M + I              +A    + +A     SY+
Sbjct: 173 NINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEF-LALSPAASYI 231

Query: 244 GKQNLLVNGGF 254
             Q   ++GG 
Sbjct: 232 TGQAFTIDGGI 242

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  114 bits (285), Expect = 3e-31
 Identities = 52/259 (20%), Positives = 95/259 (36%), Gaps = 40/259 (15%)

Query: 24  LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYI-HC 80
           L G+ A++ G  +   +G + A    + GA+V ++   + L               +   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVS-ILDTPKSDLERLLAVNTIGG 139
           DV+ + E+  L       FG LD LV++             +DT + D    L V+    
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKSLA 198
             VA+ A  ++  R  G I+  T               +P  N   ++K  +   V+ LA
Sbjct: 126 VAVARRAEPLL--REGGGIVTLTYYA--------SEKVVPKYNVMAIAKAALEASVRYLA 175

Query: 199 AELGRYGIRVDCVS-----------HTYGLAMAEAIAS------------IANAALYNMA 235
            ELG  G+RV+ +S                 M + +A             + N  L+ ++
Sbjct: 176 YELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLS 235

Query: 236 KDDDTSYVGKQNLLVNGGF 254
                S +  + + V+ G+
Sbjct: 236 --PLASGITGEVVYVDAGY 252

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  112 bits (281), Expect = 1e-30
 Identities = 54/263 (20%), Positives = 88/263 (33%), Gaps = 40/263 (15%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADV-QDNLGQALADKLG-------HQDVCYIH 79
            A+ITGGA  IG S A   H+ G +VV+     +   Q L  +L              + 
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERL-------- 131
              S      +++D +   FG+ D+LVN+         +   DT  +   +         
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGIL 191
              N +    + +  AR               +    C  +  L       Y ++K  + 
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWR--SRNLSVVNLCDAMTDLPLPGFCVYTMAKHALG 180

Query: 192 GLVKSLAAELGRYGIRVDCVSHTYGL-------AMAEAIAS-------------IANAAL 231
           GL ++ A EL    IRV+ V+    L          E                 IA+A  
Sbjct: 181 GLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKVPLGQSEASAAQIADAIA 240

Query: 232 YNMAKDDDTSYVGKQNLLVNGGF 254
           + +    D  Y+    L V+GG 
Sbjct: 241 F-LV-SKDAGYITGTTLKVDGGL 261

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  112 bits (280), Expect = 2e-30
 Identities = 61/269 (22%), Positives = 100/269 (37%), Gaps = 51/269 (18%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-----NLGQALADKLGHQDVCYI 78
           L+G+VA++TG  SGIG   A      GA +V+    D      +   LA + G + V Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVK-VLYD 60

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             D+S    V  LVD  V + G++DILVN+      +    I D P    + +LA+N   
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAG---IQHTALIEDFPTEKWDAILALNLSA 117

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
            F     A   M  +  G I+               + +   + Y  +K G++G  K  A
Sbjct: 118 VFHGTAAALPHMKKQGFGRIINIASAHGL-------VASANKSAYVAAKHGVVGFTKVTA 170

Query: 199 AELGRYGIRVDCVS---------------------HTYGLAMAEAIAS------------ 225
            E    GI  + +                           A  E ++             
Sbjct: 171 LETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230

Query: 226 IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
           +   A++ +A  D  + +    + V+GG+
Sbjct: 231 LGGTAVF-LA-SDAAAQITGTTVSVDGGW 257

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIH 79
            LQG+  I+TG + GIG   A    K GA VV+        Q +       G     YI 
Sbjct: 11  MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIA 70

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
             + +       V       G LD+L+    N      +++       + + + VN +  
Sbjct: 71  GTMEDMTFAEQFVAQAGKLMGGLDMLIL---NHITNTSLNLFHDDIHHVRKSMEVNFLSY 127

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-YYGVSKFGILGLVKSLA 198
            ++   A  ++  +  G I+  +           G    P    Y  SKF + G   S+ 
Sbjct: 128 VVLTVAALPML-KQSNGSIVVVSSLA--------GKVAYPMVAAYSASKFALDGFFSSIR 178

Query: 199 AELG--RYGIRVDCVS 212
            E    R  + +    
Sbjct: 179 KEYSVSRVNVSITLCV 194

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  106 bits (264), Expect = 3e-28
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 18/201 (8%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNLGQALADKLGHQ----DV 75
            L   V ++TG + G G + A    +    G+ ++++   +++ + L ++LG Q     V
Sbjct: 3   GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKV 62

Query: 76  CYIHCDVSNEREVINLV----DTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERL 131
                D+  E  V  L+    +    +  +  +L+N+   L       +     +++   
Sbjct: 63  VLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNY 122

Query: 132 LAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGIL 191
            A+N      +                     +   A              Y   K    
Sbjct: 123 WALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ-----PYKGWGLYCAGKAARD 177

Query: 192 GLVKSLAAELGRYGIRVDCVS 212
            L + LAAE     +RV   +
Sbjct: 178 MLYQVLAAE--EPSVRVLSYA 196

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  104 bits (259), Expect = 1e-27
 Identities = 32/202 (15%), Positives = 61/202 (30%), Gaps = 18/202 (8%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
               ++TG   GIG    Q   K+     ++           L      + V  +   V+
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSR-VHVLPLTVT 61

Query: 84  NEREVINLVDTTVAKFGK--LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
            ++ +   V       G   L +L+N+   L   G  +  +  ++ +   L VNT    L
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG--TNTEPNRAVIAEQLDVNTTSVVL 119

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN-----------YYGVSKFGI 190
           + +    ++                 A   I        +            Y +SK  I
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 191 LGLVKSLAAELGRYGIRVDCVS 212
               ++LA +L    + V    
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFC 201

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 5e-27
 Identities = 45/264 (17%), Positives = 83/264 (31%), Gaps = 52/264 (19%)

Query: 27  RVAIITGGASGIGASAAQLFHK-NGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVS 83
            VA++TGG  GIG +  +   +     VV+       GQA   +L        +   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           + + +  L D    ++G LD+LVN   N      V+         E  +  N  G   V 
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVN---NAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVC 120

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTE-------------------------------- 171
                ++  + +G ++  +   +    +                                
Sbjct: 121 TELLPLI--KPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 178

Query: 172 --IEGLCNIPANYYGVSKFGILGLVKSLAAELGRY----GIRVDCVS----HT--YGLAM 219
             +      P++ YGV+K G+  L +  A +L        I ++        T   G   
Sbjct: 179 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 238

Query: 220 AEAIASIANAALYNMAKDDDTSYV 243
            ++    A   +Y      D    
Sbjct: 239 TKSPEEGAETPVYLALLPPDAEGP 262

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  101 bits (253), Expect = 8e-27
 Identities = 51/253 (20%), Positives = 96/253 (37%), Gaps = 42/253 (16%)

Query: 24  LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS 83
              R  ++TGG  GIG + AQ    +G KV +        + L           +  DV+
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---------GVEVDVT 55

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           +   V           G +++LV++            +   +   E+++  N  G F VA
Sbjct: 56  DSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAFL---MRMTEEKFEKVINANLTGAFRVA 112

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR 203
           + A+R M   + G +++           + G+ N     Y  SK G++G+ +S+A EL +
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSG-----LWGIGNQAN--YAASKAGVIGMARSIARELSK 165

Query: 204 YGIRVDCVSHTY-------------GLAMAEAIAS--------IANAALYNMAKDDDTSY 242
             +  + V+  Y                  + I +        +A    + +A  +D SY
Sbjct: 166 ANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSF-LA-SEDASY 223

Query: 243 VGKQNLLVNGGFR 255
           +    + V+GG  
Sbjct: 224 ISGAVIPVDGGMG 236

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  100 bits (250), Expect = 3e-26
 Identities = 56/257 (21%), Positives = 91/257 (35%), Gaps = 49/257 (19%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           R A++TGGASG+G +AA      G +VV+ D++      +           +  DV+ E 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLIY----------VEGDVTREE 51

Query: 87  EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA 146
           +V   V     +     ++  +G  L  +              R+L VN +G F V + A
Sbjct: 52  DVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 111

Query: 147 ARV------MVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
           A            +RG I+ T                I    Y  SK G++ L    A E
Sbjct: 112 AWAMRENPPDAEGQRGVIVNTASVAAF-------EGQIGQAAYAASKGGVVALTLPAARE 164

Query: 201 LGRYGIRVDCVS----------HTYGLAMAEAIAS------------IANAALYNMAKDD 238
           L  +GIRV  V+               A A   A              A   L+ + ++ 
Sbjct: 165 LAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLH-ILEN- 222

Query: 239 DTSYVGKQNLLVNGGFR 255
               +  + + ++G  R
Sbjct: 223 --PMLNGEVVRLDGALR 237

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 94.2 bits (233), Expect = 8e-24
 Identities = 46/261 (17%), Positives = 90/261 (34%), Gaps = 41/261 (15%)

Query: 23  RLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ-DVCYIH 79
            L G+  ++TG AS   I    AQ  H+ GA++      D L   + +          + 
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQ 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFV--SILDTPKSDLERLLAVNTI 137
           CDV+ +  +  +       + K D  V+S             +    +   +    +++ 
Sbjct: 62  CDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSY 121

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP-ANYYGVSKFGILGLVKS 196
               +AK    ++ P      L   G              IP  N  G++K  +   V+ 
Sbjct: 122 SFVAMAKACRSMLNPGSALLTLSYLG----------AERAIPNYNVMGLAKASLEANVRY 171

Query: 197 LAAELGRYGIRVDCVSHTY-----------GLAMAEAIAS------------IANAALYN 233
           +A  +G  G+RV+ +S                 M     +            + N+A + 
Sbjct: 172 MANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL 231

Query: 234 MAKDDDTSYVGKQNLLVNGGF 254
            +  D ++ +  + + V+GGF
Sbjct: 232 CS--DLSAGISGEVVHVDGGF 250

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.4 bits (231), Expect = 1e-23
 Identities = 55/198 (27%), Positives = 84/198 (42%), Gaps = 15/198 (7%)

Query: 23  RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDV 82
            ++G VA+ITGGASG+G + A+     GA  V+ D+ ++ G+A A KLG+  V       
Sbjct: 2   SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT 61

Query: 83  SNEREVINLVDTTVAKFGKLDILVNSGCNL--EYRGFVSILDTPKSDLERLLAVNTIGGF 140
           S +     L             +  +G  +  +             D +R+L VN +G F
Sbjct: 62  SEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTF 121

Query: 141 LVAKHAARVMVPR------RRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLV 194
            V +  A  M         +RG I+ T           EG     A  Y  SK GI+G+ 
Sbjct: 122 NVIRLVAGEMGQNEPDQGGQRGVIINTASVAA-----FEGQVGQAA--YSASKGGIVGMT 174

Query: 195 KSLAAELGRYGIRVDCVS 212
             +A +L   GIRV  ++
Sbjct: 175 LPIARDLAPIGIRVMTIA 192

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 91.8 bits (227), Expect = 5e-23
 Identities = 24/190 (12%), Positives = 56/190 (29%), Gaps = 19/190 (10%)

Query: 25  QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSN 84
           + R  ++ GG   +G+   Q F      V   DV +N      ++     +  +    + 
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN------EEASASVIVKMTDSFTE 54

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
           + + +      +    K+D ++            S   +   + + +   +     + + 
Sbjct: 55  QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKS--KSLFKNCDLMWKQSIWTSTISSH 112

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG-- 202
            A + +        L                       YG++K  +  L +SLA +    
Sbjct: 113 LATKHLKEGGL-LTLAGAKAALDGT--------PGMIGYGMAKGAVHQLCQSLAGKNSGM 163

Query: 203 RYGIRVDCVS 212
             G     V 
Sbjct: 164 PSGAAAIAVL 173

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score = 87.1 bits (214), Expect = 6e-21
 Identities = 45/258 (17%), Positives = 87/258 (33%), Gaps = 36/258 (13%)

Query: 23  RLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIH 79
            L+G+  +I G A+   I    AQ     GA +    + ++L + +              
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYE 61

Query: 80  CDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGG 139
            DVS E    +L ++     G LD +V+S            L              ++  
Sbjct: 62  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 121

Query: 140 FLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAA 199
            +   +  + ++      +        T             N  G++K  +   V+ LA 
Sbjct: 122 LIELTNTLKPLLNNGASVL--------TLSYLGSTKYMAHYNVMGLAKAALESAVRYLAV 173

Query: 200 ELGRYGIRVDCVSH-------TYGLAMAEAIAS----------------IANAALYNMAK 236
           +LG++ IRV+ +S        + G+A    I                  + NA +Y ++ 
Sbjct: 174 DLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLS- 232

Query: 237 DDDTSYVGKQNLLVNGGF 254
              +S V  +   V+ G+
Sbjct: 233 -SLSSGVSGEVHFVDAGY 249

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (211), Expect = 2e-20
 Identities = 37/194 (19%), Positives = 63/194 (32%), Gaps = 20/194 (10%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD--------KLGHQDVCYI 78
            V +ITG +SGIG   A     + ++           +                  +  +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 79  HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG 138
             DV + + V    +                CN        +    +  +  +L VN +G
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVD-----VLVCNAGLGLLGPLEALGEDAVASVLDVNVVG 117

Query: 139 GFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLA 198
              + +     M  R  G +L T   G      + GL       Y  SKF + GL +SLA
Sbjct: 118 TVRMLQAFLPDMKRRGSGRVLVTGSVGG-----LMGLPFNDV--YCASKFALEGLCESLA 170

Query: 199 AELGRYGIRVDCVS 212
             L  +G+ +  + 
Sbjct: 171 VLLLPFGVHLSLIE 184

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score = 85.5 bits (210), Expect = 3e-20
 Identities = 48/282 (17%), Positives = 89/282 (31%), Gaps = 61/282 (21%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--------------- 71
           VA++TG A  +G S A+  H  G  V +   +      AL+  L                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 72  -----HQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSI------ 120
                          V+       LV      +G+ D+LVN+  +      +        
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 121 -----LDTPKSDLERLLAVNTIGGFLVAKHAARVMVP---RRRGCILYTTGTGTTACTEI 172
                 +  ++    L   N I  + + K  A  +     + RG       +       +
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTN----YSIINMVDAM 179

Query: 173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGL-------AMAEAIAS 225
                +    Y ++K  + GL +S A EL    IRV+ V     +       A+ E   S
Sbjct: 180 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAVWEGHRS 239

Query: 226 -------------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                        +++  ++ +       Y+    + V+GG+
Sbjct: 240 KVPLYQRDSSAAEVSDVVIF-LC-SSKAKYITGTCVKVDGGY 279

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 76.4 bits (187), Expect = 3e-17
 Identities = 36/243 (14%), Positives = 75/243 (30%), Gaps = 34/243 (13%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
           G+V I+ GG   +G++  + F KNG  V+  D+  N      D+     +   + + + +
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSAN------DQADSNILVDGNKNWTEQ 55

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
            + I     +  +  ++D +        + G  +       + + ++  +     + AK 
Sbjct: 56  EQSILEQTASSLQGSQVDGVFCVAGG--WAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
           A   + P      L                       YG++K  +  L  SLAA+     
Sbjct: 114 ATTHLKPGGL-LQLTGAAAAMGP--------TPSMIGYGMAKAAVHHLTSSLAAKDSGLP 164

Query: 206 IRVDCVSHTYGL--------AMAEAIAS-------IANAALYNMAKDDDTSYVGKQNLLV 250
                ++              M  A  S       I+   L     +  +       L +
Sbjct: 165 DNSAVLTIMPVTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWTT-ETSSRPSSGALLKI 223

Query: 251 NGG 253
              
Sbjct: 224 TTE 226

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 76.3 bits (186), Expect = 4e-17
 Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 25/234 (10%)

Query: 27  RVAIITGGASGIGASAAQLF---HKNGAKVVIADVQDNLGQALADKL-GHQDVCYIHCDV 82
              +ITG   G+G    +      +    +          + L D    H ++  +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 83  SNEREV--INLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
            N      +      V K   L++L N+         ++ +     +L   L  NT+   
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVR--SQELLDTLQTNTVVPI 120

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIE-------GLCNIPANYYGVSKFGILGL 193
           ++AK    ++    +       G G  A   +        G  +     Y  SK  +   
Sbjct: 121 MLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAA 180

Query: 194 VKSLAAELGRYGIRVDCV----------SHTYGLAMAEAIASIANAALYNMAKD 237
            KSL+ +L    I    +            +  L +  +   I         K 
Sbjct: 181 TKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQTISKLGEKQ 234

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 66.9 bits (162), Expect = 8e-14
 Identities = 28/183 (15%), Positives = 57/183 (31%), Gaps = 32/183 (17%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
            + +I+G A+GIGA+  ++    G ++V  D++D                 +  D+S   
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA---------------EVIADLSTAE 46

Query: 87  EVINLVDTTVAKFGK-LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKH 145
                +   +AK  K +D LV              L      L  +++VN  G   +   
Sbjct: 47  GRKQAIADVLAKCSKGMDGLVLCAG----------LGPQTKVLGNVVSVNYFGATELMDA 96

Query: 146 AARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYG 205
               +    +   +  +            L           + G     +++    G  G
Sbjct: 97  FLPALKKGHQPAAVVIS------SVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQG 150

Query: 206 IRV 208
             +
Sbjct: 151 GNL 153

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score = 66.7 bits (161), Expect = 1e-13
 Identities = 35/264 (13%), Positives = 79/264 (29%), Gaps = 35/264 (13%)

Query: 23  RLQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLGHQ--DVCY 77
            L G+  +++G    S I    A++  + GA++V+       L Q + D+L  +   +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
              +  +   +   V   +    KLD +V+S   +   G            +    ++  
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGIL------ 191
                +   A + +    G I+      + A      +    +    V++F         
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 192 --------GLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIAS-------------IANAA 230
                   G +++LA      G  +   +      + E                 +A   
Sbjct: 183 VRSNLVAAGPIRTLAMS-AIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTV 241

Query: 231 LYNMAKDDDTSYVGKQNLLVNGGF 254
              ++  D         +  +GG 
Sbjct: 242 CALLS--DWLPATTGDIIYADGGA 263

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 59.5 bits (142), Expect = 6e-11
 Identities = 31/225 (13%), Positives = 69/225 (30%), Gaps = 46/225 (20%)

Query: 25  QGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--------- 73
              +  I G     G G   A+   K   K++           + +    +         
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 74  ------------DVCYIH-------------CDVSNEREVINLVDTTVAKFGKLDILVNS 108
                       D  +                ++     + ++ +    K+GK+++LV+S
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 109 GCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTA 168
             N +      +L+T +      L+ ++     + K+   +M P+     L         
Sbjct: 121 LANAKEVQK-DLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLT-------- 171

Query: 169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVS 212
               + +          +K  +    + LA  LG  Y IR++ +S
Sbjct: 172 YHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTIS 216

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 59.0 bits (141), Expect = 6e-11
 Identities = 36/284 (12%), Positives = 73/284 (25%), Gaps = 55/284 (19%)

Query: 23  RLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---------- 70
            L+G+ A I G A   G G + A+     GA++++      L                  
Sbjct: 5   DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVL 64

Query: 71  ------------------------GHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV 106
                                               S+   V    +     FG +DILV
Sbjct: 65  PDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILV 124

Query: 107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT 166
           +S  N        +L+T +      ++ ++     +  H   +M P      L    +  
Sbjct: 125 HSLAN-GPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASER 183

Query: 167 TACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAEAIAS- 225
                  G+ +  A     ++       +     +               +   + +   
Sbjct: 184 IIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEY 243

Query: 226 ---------------IANAALYNMAKDDDTSYVGKQNLLVNGGF 254
                          + NAA + +      S +    + V+ G 
Sbjct: 244 SYNNAPIQKTLTADEVGNAAAF-LV-SPLASAITGATIYVDNGL 285

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 57.2 bits (137), Expect = 1e-10
 Identities = 24/186 (12%), Positives = 55/186 (29%), Gaps = 22/186 (11%)

Query: 22  YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHC 80
             ++G+ A++  G   +G  +A L    GA+VV+   + +  QA AD +     V     
Sbjct: 19  GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAA 78

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           + +++                   +  +G        + +   P++  +   ++  +  +
Sbjct: 79  ETADDASRAEA-------VKGAHFVFTAGA-------IGLELLPQAAWQNESSIEIVADY 124

Query: 141 LVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAE 200
                     +        Y             G   I      + +  I  L +S    
Sbjct: 125 NAQPPLGIGGIDATDKGKEYGGKRAF-------GALGIGGLKLKLHRACIAKLFESSEGV 177

Query: 201 LGRYGI 206
                I
Sbjct: 178 FDAEEI 183

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 57.4 bits (137), Expect = 1e-10
 Identities = 28/212 (13%), Positives = 61/212 (28%), Gaps = 15/212 (7%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--DVCYIHCDVSN 84
           RVA++ GG   +G   A      G ++V+   ++   +A A +      D         +
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
             E  ++   T+     +D   +            ++                     A+
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARD---LKNILREKIVVSPLVPVSRGAKGFTYSSERSAAE 117

Query: 145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRY 204
             A V+   +    L+T      A              + V   G     K +   L   
Sbjct: 118 IVAEVLESEKVVSALHTIPAARFA-------NLDEKFDWDVPVCGDDDESKKVVMSLISE 170

Query: 205 GIRVDCVSHTYGLAMAEAIASIANAALYNMAK 236
              +  +     L+ +  + S+    + N+ +
Sbjct: 171 IDGLRPL-DAGPLSNSRLVESLT-PLILNIMR 200

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 50.4 bits (119), Expect = 5e-08
 Identities = 25/221 (11%), Positives = 54/221 (24%), Gaps = 25/221 (11%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVI----ADVQDNLGQALADKLGHQDVCYIHCD 81
               ++TGG  G+G   A+   + GA  ++    +    +    L  +L           
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 82  VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFL 141
              +      V   +   G    L             ++       +ER      +G   
Sbjct: 69  --CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARN 126

Query: 142 VAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAEL 201
           + +    + +        + +  G                 Y          +  LA + 
Sbjct: 127 LHELTRELDLTAFVLFSSFASAFGAPGLG-----------GYAPGN----AYLDGLAQQR 171

Query: 202 GRYGIRVDCVS----HTYGLAMAEAIASIANAALYNMAKDD 238
              G+    V+       G+A            +  M  + 
Sbjct: 172 RSDGLPATAVAWGTWAGSGMAEGPVADRFRRHGVIEMPPET 212

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

 Score = 43.0 bits (99), Expect = 2e-05
 Identities = 13/62 (20%), Positives = 21/62 (33%), Gaps = 2/62 (3%)

Query: 30 IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVI 89
          +I G    IG    +   +     V     D    A++  L H    ++  D+S   E I
Sbjct: 4  LILGVNGFIGNHLTERLLREDHYEVYGL--DIGSDAISRFLNHPHFHFVEGDISIHSEWI 61

Query: 90 NL 91
            
Sbjct: 62 EY 63

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

 Score = 41.7 bits (96), Expect = 4e-05
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 12/84 (14%)

Query: 9  KIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVI----ADVQDNLGQ 64
          KIDN +LP        +G + ++TG    + +   +   ++G KV      A    NL +
Sbjct: 2  KIDNAVLP--------EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQK 53

Query: 65 ALADKLGHQDVCYIHCDVSNEREV 88
              K   +    +  D+  +   
Sbjct: 54 RWDAKYPGRFETAVVEDMLKQGAY 77

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

 Score = 40.7 bits (94), Expect = 9e-05
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 16/191 (8%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA---LADKLGHQDVCYIHCDVSNER 86
           ++TGG+  IG+       +NG  V+I D   N  ++   + ++LG +   ++  D+ NE 
Sbjct: 4   LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEA 63

Query: 87  EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHA 146
            +  ++         +D +++          +  +             N  G   +    
Sbjct: 64  LMTEIL-----HDHAIDTVIHFAG-------LKAVGESVQKPLEYYDNNVNGTLRLISAM 111

Query: 147 ARVMVPRRRGCILYTTGTGTTACTEIEGLC-NIPANYYGVSKFGILGLVKSLAAELGRYG 205
               V         T          +E      P + YG SK  +  ++  L      + 
Sbjct: 112 RAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWS 171

Query: 206 IRVDCVSHTYG 216
           I +    +  G
Sbjct: 172 IALLRYFNPVG 182

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 9e-05
 Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 26/202 (12%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIAD---------VQDNLGQALADKLGHQDVCY 77
            VA+ITG     G+  A+   + G +V               ++L +     +   ++  
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHI-EGNMKL 60

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
            + D+++   ++ +++                  +   G  S +       E    V+ +
Sbjct: 61  HYGDLTDSTCLVKIINE------------VKPTEIYNLGAQSHVKISFDLAEYTADVDGV 108

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---EGLCNIPANYYGVSKFGILGLV 194
           G   +        +         +T        EI   E     P + YG +K     +V
Sbjct: 109 GTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIV 168

Query: 195 KSLAAELGRYGIRVDCVSHTYG 216
            +       + +     +H   
Sbjct: 169 VNFREAYNLFAVNGILFNH-ES 189

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.2 bits (92), Expect = 1e-04
 Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 3/73 (4%)

Query: 19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQD-VCY 77
          +S+++  G+   +TG     G   +      GA V    +      +L +     D +  
Sbjct: 3  NSFWQ--GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQS 60

Query: 78 IHCDVSNEREVIN 90
             D+ ++ +++ 
Sbjct: 61 EIGDIRDQNKLLE 73

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

 Score = 38.9 bits (89), Expect = 3e-04
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 30 IITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCDVSNERE 87
          +ITGG   +G++ A      G  +++ D     G    L       +  ++H D+ N+ +
Sbjct: 4  LITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKND 63

Query: 88 VINLVD 93
          V  L+ 
Sbjct: 64 VTRLIT 69

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 38.8 bits (89), Expect = 4e-04
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG--QALADKLGHQDVCYIHCDVSN 84
          R A++TG     GA  A+L  + G +V     + +      L +     D+ Y   D+++
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 85 EREVIN 90
             V  
Sbjct: 61 ACSVQR 66

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 38.4 bits (87), Expect = 6e-04
 Identities = 15/80 (18%), Positives = 25/80 (31%), Gaps = 3/80 (3%)

Query: 26  GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNE 85
           G   ++ GG    G + A    K   +V I    DNL + L D     +       + + 
Sbjct: 1   GSRVMVIGGDGYCGWATALHLSKKNYEVCIV---DNLVRRLFDHQLGLESLTPIASIHDR 57

Query: 86  REVINLVDTTVAKFGKLDIL 105
                 +     +    DI 
Sbjct: 58  ISRWKALTGKSIELYVGDIC 77

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 38.0 bits (87), Expect = 7e-04
 Identities = 35/202 (17%), Positives = 61/202 (30%), Gaps = 31/202 (15%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA----LADKLGHQDVCYIHCDVSNE 85
           I+TGGA  IG++     + N   V +  + D L  A      + +    V  +  D+++ 
Sbjct: 6   IVTGGAGFIGSNFVHYVYNNHPDVHVTVL-DKLTYAGNKANLEAILGDRVELVVGDIAD- 63

Query: 86  REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIG--GFLVA 143
                           +D L      + +    S  D   +D    +  N IG    L A
Sbjct: 64  -------------AELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEA 110

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI---------PANYYGVSKFGILGLV 194
                +         +Y                           P++ Y  +K     +V
Sbjct: 111 ARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIV 170

Query: 195 KSLAAELGRYGIRVDCVSHTYG 216
           K+     G      +C S+ YG
Sbjct: 171 KAWVRSFGVKATISNC-SNNYG 191

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 36.9 bits (84), Expect = 9e-04
 Identities = 8/61 (13%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER 86
           V ++  G+  +      +   +G KV +A       + L+  + H     +  +     
Sbjct: 4  SVLML--GSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAAL 61

Query: 87 E 87
          +
Sbjct: 62 D 62

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} Length = 370

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

 Score = 37.8 bits (86), Expect = 0.001
 Identities = 18/90 (20%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 8   LKIDNNILPTLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA 67
           L+I  N L   S+       V I+  G +G+  SAA +    G +V + +  +  G  + 
Sbjct: 17  LEIARNGLKATSNPKH----VVIVGAGMAGL--SAAYVLAGAGHQVTVLEASERPGGRVR 70

Query: 68  ----DKLGHQDVCYIHCDVSNEREVINLVD 93
               ++ G              R V   + 
Sbjct: 71  TYRNEEAGWYANLGPMRLPEKHRIVREYIR 100

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 11/165 (6%)

Query: 27  RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ---ALADKLGHQDVCYIHCDVS 83
           ++ ++TGGA  IG+       +NG   V+AD   N      A  + L    + +   D+ 
Sbjct: 2   KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLC 61

Query: 84  NEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVA 143
           + + +  +      K  K+D +++       +        P       +    +   L+ 
Sbjct: 62  DRKGLEKVF-----KEYKIDSVIHFAG---LKAVGESTQIPLRYYHNNILGTVVLLELMQ 113

Query: 144 KHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKF 188
           ++     V      +              E     P N YG +K+
Sbjct: 114 QYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKY 158

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.0 bits (85), Expect = 0.001
 Identities = 38/213 (17%), Positives = 71/213 (33%), Gaps = 43/213 (20%)

Query: 30  IITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA-----LADKLGHQDVCYIHCDVSN 84
           +ITGGA  IG++  +   KN    V+    D L  A     L+D        + H D+ +
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNI--DKLTYAGNLESLSDISESNRYNFEHADICD 61

Query: 85  EREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK 144
             E+  +      +  + D +++           S +D   +     +  N +G + + +
Sbjct: 62  SAEITRIF-----EQYQPDAVMHLAAE-------SHVDRSITGPAAFIETNIVGTYALLE 109

Query: 145 HAARVMVP----RRRGCILYTTGTG---------------TTACTEIEGLCNIPANYYGV 185
            A +        ++     +   T                 T     E     P++ Y  
Sbjct: 110 VARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSA 169

Query: 186 SKFGILGLVKSLAAELGRYGIRVDCV--SHTYG 216
           SK     LV++       YG+       S+ YG
Sbjct: 170 SKASSDHLVRAWRRT---YGLPTIVTNCSNNYG 199

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} Length = 335

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 11/37 (29%), Positives = 20/37 (54%)

Query: 27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG 63
          ++AII  G SG+  + A L  K   +V + + + + G
Sbjct: 6  KIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPG 42

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 35.9 bits (82), Expect = 0.003
 Identities = 27/201 (13%), Positives = 61/201 (30%), Gaps = 27/201 (13%)

Query: 28  VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ-------ALADKLGHQDVCYIHC 80
           VA+ITG     G+  A+   + G +V     + +                 +      + 
Sbjct: 3   VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62

Query: 81  DVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGF 140
           D+S+   +  ++     +  + D + N G        +S +       E    V+ +G  
Sbjct: 63  DLSDTSNLTRIL-----REVQPDEVYNLGA-------MSHVAVSFESPEYTADVDAMGTL 110

Query: 141 LVAKHAARVMVPRRRGCILYTTGT--GTTACTEI-EGLCNIPANYYGVSKFGILGLVKSL 197
            + +    + + ++      +T    G        E     P + Y V+K     +  + 
Sbjct: 111 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY 170

Query: 198 AAELGRYGIRVDCV--SHTYG 216
                 YG+        +   
Sbjct: 171 RE---SYGMYACNGILFNHES 188

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 35.7 bits (81), Expect = 0.003
 Identities = 37/222 (16%), Positives = 62/222 (27%), Gaps = 14/222 (6%)

Query: 18  LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCY 77
           L      Q +V +ITG A  IG++  +   K   KVV     DN        L       
Sbjct: 8   LRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGL---DNFATGHQRNLDEVRSLV 64

Query: 78  IHCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTI 137
                SN       +   +      +        + ++  +  +    +D     A N  
Sbjct: 65  SEKQWSN----FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNID 120

Query: 138 GGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSL 197
           G   +   A    V         +T        ++E     P + Y V+K+         
Sbjct: 121 GFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVF 180

Query: 198 AAELG------RYGIRVDCVSHTYGLAMAEAIASIANAALYN 233
           +   G      RY   V         A A  I    ++ +  
Sbjct: 181 SRCYGFSTIGLRYF-NVFGRRQDPNGAYAAVIPKWTSSMIQG 221

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.94
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.83
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.79
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.75
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.74
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.72
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.69
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.69
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.68
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.66
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.66
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.66
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.66
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.64
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.64
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.64
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.63
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.63
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.61
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.56
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.45
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.44
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.32
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.23
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.21
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.14
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.06
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.04
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	99.02
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	98.89
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	98.0
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.99
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.96
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.93
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.89
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.73
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.69
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.65
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.63
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.59
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.59
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.56
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.53
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.48
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.46
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.41
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	97.4
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.34
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.27
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.25
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.21
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.08
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.06
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.05
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.03
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.97
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.93
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.87
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	96.84
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.83
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.83
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.77
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.76
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.72
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.7
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	96.69
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.68
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.67
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.66
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	96.61
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.55
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.54
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.49
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.44
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.43
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.43
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.4
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.39
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.39
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	96.32
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.25
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.25
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	96.25
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	96.21
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	96.2
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	96.19
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	96.18
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	96.13
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.12
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.1
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	96.09
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.08
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.07
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	95.98
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	95.88
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	95.86
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.85
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	95.81
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.75
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	95.61
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	95.43
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.41
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.4
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	95.36
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.19
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.17
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	95.15
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.12
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	95.1
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	95.03
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	94.87
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.76
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.73
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.72
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.7
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.69
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.63
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	94.63
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	94.55
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	94.51
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.48
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.45
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.4
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.34
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.33
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	94.29
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.28
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	94.14
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	94.06
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	93.79
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	93.75
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.75
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.74
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.67
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	93.56
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	93.55
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	93.47
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.45
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	93.25
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.23
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.14
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	93.04
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.04
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	93.0
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	92.98
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	92.89
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	92.53
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	92.43
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	92.3
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	92.27
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.14
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.09
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	91.71
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	91.7
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.69
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	91.67
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.26
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	91.24
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	91.24
d1gsoa2	105	Glycinamide ribonucleotide synthetase (GAR-syn), N	91.01
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	90.97
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	90.72
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	90.69
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	90.52
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	89.86
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	89.84
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	89.71
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	89.48
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	89.47
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.46
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	89.39
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	89.15
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	89.05
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	88.96
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	88.88
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	88.71
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	88.58
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	88.32
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	88.14
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	87.98
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	87.96
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	87.92
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	87.83
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	87.83
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.2
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	86.65
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	86.61
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	86.55
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	86.52
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	86.14
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	86.08
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	85.69
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	85.65
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	85.49
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	85.43
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	85.25
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	85.15
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	84.87
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	84.14
d1iowa1	96	D-Ala-D-Ala ligase, N-domain {Escherichia coli, ge	84.01
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.8
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	83.68
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	83.58
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	83.41
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	83.09
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.99
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	82.92
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	82.89
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	82.86
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	82.76
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	82.56
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	82.52
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	82.42
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	82.41
d1vkna1	176	N-acetyl-gamma-glutamyl-phosphate reductase ArgC {	82.22
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	81.78
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	81.54
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	81.43
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	81.38
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	81.14
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.13
d2f5va1	379	Pyranose 2-oxidase {White-rot fungus (Peniophora s	81.1
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	80.98
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	80.52
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.5
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	80.38

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.4e-53  Score=345.90  Aligned_cols=219  Identities=27%  Similarity=0.428  Sum_probs=200.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.++++ .+..++.+|++++++++++++++.+++|++
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGEV   79 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCCc
Confidence            5799999999999999999999999999999999999999999988875 578889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+|||||+...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++|    |..+..+.++.   .+
T Consensus        80 DilVnnAg~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~is----S~~~~~~~~~~---~~  149 (243)
T d1q7ba_          80 DILVNNAGITR---DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIG----SVVGTMGNGGQ---AN  149 (243)
T ss_dssp             SEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC----CHHHHHCCTTC---HH
T ss_pred             ceehhhhhhcc---ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeec----chhhcCCCCCC---HH
Confidence            99999987654   3677889999999999999999999999999999988899999999    44444444444   77


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |++||+|+++|++++|.|++++|||||+|+| |.++|+                    ++  |||+++++.||  +|+++
T Consensus       150 Y~asKaal~~lt~~lA~ela~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL--~S~~s  226 (243)
T d1q7ba_         150 YAAAKAGLIGFSKSLAREVASRGITVNVVAP-GFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFL--ASDEA  226 (243)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--HSGGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCeEEEEEec-ceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHHHH--hCchh
Confidence            9999999999999999999999999999999 888886                    12  99999999999  99999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      +|+|||+|.+||||+
T Consensus       227 ~~itGq~i~vdGG~~  241 (243)
T d1q7ba_         227 AYITGETLHVNGGMY  241 (243)
T ss_dssp             TTCCSCEEEESTTSS
T ss_pred             cCCcCCeEEECCCeE
Confidence            999999999999985

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.5e-52  Score=344.80  Aligned_cols=222  Identities=30%  Similarity=0.454  Sum_probs=196.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.   ..++.++++|++++++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999999999887776665542   247889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|+||+||||||...   ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||+++|..+.   ..+.+.. 
T Consensus        81 ~g~iDiLVnnAG~~~---~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~---~~~~~~~-  153 (251)
T d1vl8a_          81 FGKLDTVVNAAGINR---RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVE---EVTMPNI-  153 (251)
T ss_dssp             HSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGT---CCCSSSC-
T ss_pred             cCCCCEEEECCCCCC---CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhc---cccCccc-
Confidence            999999999988654   367888999999999999999999999999999999999999999954321   1122222 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~  234 (255)
                        .+|++||+|+++|+++||.|++++|||||+|+| |.++|+                   +   +  |+|++.+++|| 
T Consensus       154 --~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL-  229 (251)
T d1vl8a_         154 --SAYAASKGGVASLTKALAKEWGRYGIRVNVIAP-GWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFL-  229 (251)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH-
T ss_pred             --cchHHHHHhHHHHHHHHHHHhcccCeEEEEEee-CcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence              679999999999999999999999999999999 888776                   1   2  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|++++|+|||+|.|||||+
T Consensus       230 -~S~~a~~itG~~i~vDGG~t  249 (251)
T d1vl8a_         230 -ASEEAKYVTGQIIFVDGGWT  249 (251)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hCchhCCCcCcEEEeCcCee
Confidence             99999999999999999985

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.9e-52  Score=344.49  Aligned_cols=221  Identities=26%  Similarity=0.390  Sum_probs=197.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh----CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL----GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.+++..+++    ...++.++++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            478999999999999999999999999999999999988877665554    3357889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|+||+||||||....  ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.    .+..+.+.. 
T Consensus        81 ~G~iDiLVnnAG~~~~--~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~----~~~~~~~~~-  153 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGK--QNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASV----GGIRGIGNQ-  153 (258)
T ss_dssp             HSCCSEEEECCCCCCC--CBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCG----GGTSBCSSB-
T ss_pred             hCCCCEEEECCccccc--CCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccH----hhccCCCCc-
Confidence            9999999999886532  256788899999999999999999999999999998999999999954    334444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------H---h--HHhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------E---A--IASIAN  228 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~---~--~~~~~~  228 (255)
                        ..|++||+|+.+|+++||.|++++|||||+|+| |.++|+                         +   +  |+|++.
T Consensus       154 --~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~  230 (258)
T d1iy8a_         154 --SGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAP-GAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAA  230 (258)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHhCccCceEEEEee-CcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHH
Confidence              779999999999999999999999999999999 877765                         1   2  999999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++||  +|++++|+|||+|.||||++
T Consensus       231 ~v~fL--~S~~s~~itG~~i~VDGG~s  255 (258)
T d1iy8a_         231 VVAFL--LSDDASYVNATVVPIDGGQS  255 (258)
T ss_dssp             HHHHH--TSGGGTTCCSCEEEESTTTT
T ss_pred             HHHHH--hCchhcCCcCceEEcCcchh
Confidence            99999  99999999999999999985

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.9e-52  Score=342.44  Aligned_cols=219  Identities=30%  Similarity=0.437  Sum_probs=192.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|++... ++..++. ..++.++.+|++|+++++++++++.+++|+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999987543 3333433 367899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.    .+..+.+..   .
T Consensus        81 iDilVnnAG~~~---~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~----~~~~~~~~~---~  150 (247)
T d2ew8a1          81 CDILVNNAGIYP---LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTST----TYWLKIEAY---T  150 (247)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGGSCCSSC---H
T ss_pred             CCEEEECCCCCC---CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccc----hhcccCccc---c
Confidence            999999988754   367888999999999999999999999999999999989999999944    444444444   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhccC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      .|++||+|+++|+++||.|++++|||||+|+| |.++|+                      ++  |||++.+++||  +|
T Consensus       151 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL--~S  227 (247)
T d2ew8a1         151 HYISTKAANIGFTRALASDLGKDGITVNAIAP-SLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFL--AS  227 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCC------------------CTTSSSCSCCCTHHHHHHHHHH--TS
T ss_pred             cchhhhccHHHHHHHHHHHhcccCeEEEEEee-CCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHH--hC
Confidence            79999999999999999999999999999999 888876                      12  99999999999  99


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++|+|||+|.||||+.
T Consensus       228 ~~s~~itG~~i~vDGG~~  245 (247)
T d2ew8a1         228 DDASFITGQTLAVDGGMV  245 (247)
T ss_dssp             GGGTTCCSCEEEESSSCC
T ss_pred             chhcCCcCCeEEECCCEe
Confidence            999999999999999984

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.9e-52  Score=341.39  Aligned_cols=219  Identities=34%  Similarity=0.514  Sum_probs=200.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++ .++.++++|++|+++++++++++.+++|++
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   81 (244)
T d1nffa_           3 RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGL   81 (244)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh-CcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4789999999999999999999999999999999999999999988876 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++|.++|.|++++.|+||++||.    .+..+.+..   ..
T Consensus        82 dilinnAG~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~----~~~~~~~~~---~~  151 (244)
T d1nffa_          82 HVLVNNAGILN---IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSI----EGLAGTVAC---HG  151 (244)
T ss_dssp             CEEEECCCCCC---CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTSCCTTB---HH
T ss_pred             eEEEECCcccC---CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccc----ccccccccc---cc
Confidence            99999988654   367888999999999999999999999999999999889999999944    444444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------Hh--HHhhhhhhhhhhccCCCCCeeec
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------EA--IASIANAALYNMAKDDDTSYVGK  245 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~~--~~~~~~~~~~l~~~~~~~~~~~G  245 (255)
                      |++||+|+++|+|.+|.|++++|||||+|+| |.++|+               ++  |+|++++++||  +|+++.|+||
T Consensus       152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~pl~R~~~p~diA~~v~fL--~s~~s~~itG  228 (244)
T d1nffa_         152 YTATKFAVRGLTKSTALELGPSGIRVNSIHP-GLVKTPMTDWVPEDIFQTALGRAAEPVEVSNLVVYL--ASDESSYSTG  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSGGGTTSCTTCSCCSSSSCBCHHHHHHHHHHH--HSGGGTTCCS
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCEEEEEEee-CCccChhHhhhhHHHHhccccCCCCHHHHHHHHHHH--hChhhCCCcC
Confidence            9999999999999999999999999999999 888887               22  99999999999  9999999999


Q ss_pred             eeEEecCCcC
Q 025252          246 QNLLVNGGFR  255 (255)
Q Consensus       246 ~~i~~dgG~~  255 (255)
                      |+|.||||+.
T Consensus       229 ~~i~vDGG~~  238 (244)
T d1nffa_         229 AEFVVDGGTV  238 (244)
T ss_dssp             CEEEESTTGG
T ss_pred             CEEEECCCee
Confidence            9999999973

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.4e-52  Score=343.74  Aligned_cols=222  Identities=23%  Similarity=0.370  Sum_probs=200.0

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++.+.||+++||||++|||+++|++|+++|++|++++|+++.++++.++++.  .++.++.+|++|+++++++++++.++
T Consensus         5 ~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   84 (251)
T d2c07a1           5 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE   84 (251)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh
Confidence            4568999999999999999999999999999999999999988888877753  47889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+|||||+...   ..++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++||.    .+..+.++. 
T Consensus        85 ~g~iDilvnnag~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~----~~~~~~~~~-  156 (251)
T d2c07a1          85 HKNVDILVNNAGITR---DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI----VGLTGNVGQ-  156 (251)
T ss_dssp             CSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT----HHHHCCTTC-
T ss_pred             cCCceeeeecccccc---ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH----HhcCCCCCC-
Confidence            999999999987654   356778899999999999999999999999999999999999999944    444444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~  236 (255)
                        .+|++||+|+++|+++||.|++++|||||+|+| |.++|+                    ++  |+|++.++.||  +
T Consensus       157 --~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~P-G~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL--~  231 (251)
T d2c07a1         157 --ANYSSSKAGVIGFTKSLAKELASRNITVNAIAP-GFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLACFL--S  231 (251)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHHHH--H
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEcc-CCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence              679999999999999999999999999999999 888886                    12  99999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+++.|+|||+|.|||||+
T Consensus       232 S~~s~~itG~~i~vDGG~s  250 (251)
T d2c07a1         232 SDKSGYINGRVFVIDGGLS  250 (251)
T ss_dssp             SGGGTTCCSCEEEESTTSC
T ss_pred             CchhCCCcCcEEEECCCcC
Confidence            9999999999999999986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=4e-52  Score=342.46  Aligned_cols=219  Identities=33%  Similarity=0.424  Sum_probs=199.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.+++..++++ .++.++++|++++++++++++++.+++|++
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   80 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELG-DAARYQHLDVTIEEDWQRVVAYAREEFGSV   80 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CceEEEEcccCCHHHHHHHHHHHHHHcCCc
Confidence            5899999999999999999999999999999999999999888888875 578999999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.    .+..+.++.   .+
T Consensus        81 DilVnnAg~~~---~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~----~~~~~~~~~---~~  150 (254)
T d1hdca_          81 DGLVNNAGIST---GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSA----AGLMGLALT---SS  150 (254)
T ss_dssp             CEEEECCCCCC---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTSCCTTC---HH
T ss_pred             cEEEecCcccc---ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccc----hhcccccch---hh
Confidence            99999987654   367788999999999999999999999999999998889999999954    333444433   77


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh---HHhhhhhhhhhhccCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA---IASIANAALYNMAKDDD  239 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~---~~~~~~~~~~l~~~~~~  239 (255)
                      |++||+|+++|+++||.|++++|||||+|+| |.++|+                    ++   |+|+++++.||  +|++
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL--~S~~  227 (254)
T d1hdca_         151 YGASKWGVRGLSKLAAVELGTDRIRVNSVHP-GMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKL--LSDT  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHH--HSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCceEEEEeee-CcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHH--hchh
Confidence            9999999999999999999999999999999 888886                    12   89999999999  9999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      +.|+|||+|.|||||+
T Consensus       228 a~~itG~~i~vDGG~t  243 (254)
T d1hdca_         228 SSYVTGAELAVDGGWT  243 (254)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hCCCCCceEEeCCCcc
Confidence            9999999999999985

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.3e-52  Score=342.30  Aligned_cols=220  Identities=32%  Similarity=0.452  Sum_probs=197.5

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++.++++.++++.  .++.++++|++++++++++++++.++
T Consensus         6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~   85 (255)
T d1fmca_           6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999888888777642  57889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +|++|+||||||....   .++ +.+.++|++++++|+.++++++|.++|+|++++.|+||++||    ..+..+.++. 
T Consensus        86 ~g~iDilvnnAG~~~~---~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS----~~~~~~~~~~-  156 (255)
T d1fmca_          86 LGKVDILVNNAGGGGP---KPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS----MAAENKNINM-  156 (255)
T ss_dssp             HSSCCEEEECCCCCCC---CCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----GGGTCCCTTC-
T ss_pred             cCCCCEeeeCCcCCCC---Ccc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccc----cchhcccccc-
Confidence            9999999999886542   233 689999999999999999999999999999999999999994    4334444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhc
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~  235 (255)
                        .+|++||+|+++|+++||.|++++|||||+|+| |.++|+                     ++  |+|++++++||  
T Consensus       157 --~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL--  231 (255)
T d1fmca_         157 --TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAP-GAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAALFL--  231 (255)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHHHH--
T ss_pred             --ccchhHHHHHHHHHHHHHHHhCccCeEEEEeee-CcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence              779999999999999999999999999999999 888776                     12  99999999999  


Q ss_pred             cCCCCCeeeceeEEecCCc
Q 025252          236 KDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~  254 (255)
                      +|+.+.|+|||+|.|||||
T Consensus       232 ~S~~s~~itG~~i~vDGG~  250 (255)
T d1fmca_         232 CSPAASWVSGQILTVSGGG  250 (255)
T ss_dssp             HSGGGTTCCSCEEEESTTS
T ss_pred             hCchhcCCcCCEEEECcCc
Confidence            9999999999999999997

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.9e-51  Score=338.31  Aligned_cols=220  Identities=29%  Similarity=0.414  Sum_probs=197.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.. .++.++.+|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999999999999988888888754 57899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-cEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.| +||++||.    .+..+.+..   
T Consensus        83 iDiLVnnAg~~~---~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~----~~~~~~~~~---  152 (251)
T d1zk4a1          83 VSTLVNNAGIAV---NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI----EGFVGDPSL---  152 (251)
T ss_dssp             CCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCG----GGTSCCTTC---
T ss_pred             ceEEEecccccc---ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeecc----ceeccCCCc---
Confidence            999999987664   3678899999999999999999999999999999887764 89999944    333344433   


Q ss_pred             cccccchHHHHHHHHHHHHH--hcccCcEEeEeccCcchhhh------------------H---h--HHhhhhhhhhhhc
Q 025252          181 NYYGVSKFGILGLVKSLAAE--LGRYGIRVDCVSHTYGLAMA------------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e--~~~~gi~v~~v~p~~~~~t~------------------~---~--~~~~~~~~~~l~~  235 (255)
                      ..|++||+|+.+|++.+|.|  ++++|||||+|+| |.++|+                  +   +  |||++++++||  
T Consensus       153 ~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL--  229 (251)
T d1zk4a1         153 GAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHP-GYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIAYICVYL--  229 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEE-CCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHHHHHHHH--
T ss_pred             hhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeC-CCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHH--
Confidence            67999999999999999998  5689999999999 888776                  1   2  99999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|+++.|+|||+|.|||||+
T Consensus       230 ~S~~s~~itG~~i~vDGG~t  249 (251)
T d1zk4a1         230 ASNESKFATGSEFVVDGGYT  249 (251)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hCchhCCCcCcEEEECcccc
Confidence            99999999999999999985

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.4e-51  Score=336.97  Aligned_cols=215  Identities=28%  Similarity=0.426  Sum_probs=192.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+++.. +..++.   +..++++|++|+++++++++++.+++|+||
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD   78 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EVAEAI---GGAFFQVDLEDERERVRFVEEAAYALGRVD   78 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HHHHHH---TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhcCCCC
Confidence            6899999999999999999999999999999999998764 444444   356789999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.    .+..+.+..   ..|
T Consensus        79 iLVnnAG~~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~----~~~~~~~~~---~~Y  148 (248)
T d2d1ya1          79 VLVNNAAIAA---PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV----QGLFAEQEN---AAY  148 (248)
T ss_dssp             EEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG----GGTSBCTTB---HHH
T ss_pred             eEEEeCcCCC---CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc----ccccccccc---chh
Confidence            9999988654   367889999999999999999999999999999999989999999944    444444444   779


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhhhhhhc
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~~~l~~  235 (255)
                      ++||+|+++|+|.||.|++++|||||+|+| |.++|+                          ++  |+|++++++||  
T Consensus       149 ~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL--  225 (248)
T d2d1ya1         149 NASKGGLVNLTRSLALDLAPLRIRVNAVAP-GAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFL--  225 (248)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEee-CCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence            999999999999999999999999999999 888775                          12  99999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|+.+.|+|||+|.|||||+
T Consensus       226 ~S~~s~~itG~~i~vDGG~t  245 (248)
T d2d1ya1         226 ASEKASFITGAILPVDGGMT  245 (248)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hCchhcCCCCcEEEcCcCcc
Confidence            99999999999999999985

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.3e-51  Score=336.04  Aligned_cols=217  Identities=32%  Similarity=0.462  Sum_probs=195.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |+|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++   +..++.||++|+++++++++++.+++|+
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   77 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---GAHPVVMDVADPASVERGFAEALAHLGR   77 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            4689999999999999999999999999999999999999888887765   4678999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|.|++++.+.|+++||.+     ..+.++.   .
T Consensus        78 iDilVnnAG~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~-----~~~~~~~---~  146 (242)
T d1ulsa_          78 LDGVVHYAGITR---DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-----YLGNLGQ---A  146 (242)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-----GGCCTTC---H
T ss_pred             ceEEEECCcccc---cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecccc-----ccCCCCC---c
Confidence            999999988654   3677889999999999999999999999999999988888888887432     2222233   6


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhhccCCC
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNMAKDDD  239 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~~~~~~  239 (255)
                      +|++||+|+++|+++||.|++++|||||+|+| |.++|+                 +   +  |+|+++++.||  +|++
T Consensus       147 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL--~S~~  223 (242)
T d1ulsa_         147 NYAASMAGVVGLTRTLALELGRWGIRVNTLAP-GFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAALFL--LSDE  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHHHH--HSGG
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhCcEEEEEee-CcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH--hchh
Confidence            79999999999999999999999999999999 888876                 1   2  99999999999  9999


Q ss_pred             CCeeeceeEEecCCcC
Q 025252          240 TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~~  255 (255)
                      ++|+|||+|.|||||+
T Consensus       224 s~~itG~~i~vDGG~t  239 (242)
T d1ulsa_         224 SSFITGQVLFVDGGRT  239 (242)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             hCCCCCcEEEECCCcc
Confidence            9999999999999985

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=4.7e-51  Score=339.30  Aligned_cols=223  Identities=45%  Similarity=0.777  Sum_probs=197.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. ..+.++.||++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999999999999999999988864 46788999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +|++|||||...... ..+.+.+.++|++++++|+.++++++|.++|+|++++.|+|+++||..+    .....+.  ..
T Consensus        83 iD~lVnnAG~~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~----~~~~~~~--~~  155 (268)
T d2bgka1          83 LDIMFGNVGVLSTTP-YSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS----FTAGEGV--SH  155 (268)
T ss_dssp             CCEEEECCCCCCSSC-SSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG----TCCCTTS--CH
T ss_pred             cceeccccccccCCC-cccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc----ccccccc--cc
Confidence            999999988654322 3467889999999999999999999999999999999999999995432    2222221  13


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHhhhhhhhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IASIANAALYNM  234 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~~~l~  234 (255)
                      .|++||+|+++|+++||.|++++|||||+|+| |.++|+                         ++  |||++++++|| 
T Consensus       156 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL-  233 (268)
T d2bgka1         156 VYTATKHAVLGLTTSLCTELGEYGIRVNCVSP-YIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYL-  233 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHH-
T ss_pred             ccchhHHHHHhCHHHHHHHhChhCeEEEecCC-CCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHH-
Confidence            69999999999999999999999999999999 888775                         12  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|+++.|+|||+|.|||||+
T Consensus       234 -~S~~s~~itGq~i~VDGG~t  253 (268)
T d2bgka1         234 -AGDESKYVSGLNLVIDGGYT  253 (268)
T ss_dssp             -HSGGGTTCCSCEEEESTTGG
T ss_pred             -hChhhCCccCceEEECcCcc
Confidence             99999999999999999985

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.2e-51  Score=340.88  Aligned_cols=222  Identities=23%  Similarity=0.315  Sum_probs=189.9

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .++|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.  ..++.++.+|++++++++++++++.++
T Consensus         3 ~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d1xq1a_           3 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   82 (259)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999988888877764  247889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           99 F-GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~-g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      + |++|+||||||...   ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||..    +..+.+..
T Consensus        83 ~~g~idilvnnAG~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~----~~~~~~~~  155 (259)
T d1xq1a_          83 FGGKLDILINNLGAIR---SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIA----GVVSASVG  155 (259)
T ss_dssp             HTTCCSEEEEECCC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------------C
T ss_pred             hCCCcccccccccccC---CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccc----cccccccc
Confidence            8 78999999987654   3677889999999999999999999999999999988899999999544    33333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNM  234 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~  234 (255)
                         ..|++||+|+.+|+++||.|++++|||||+|+| |.++|+                     ++  |||++.+++|| 
T Consensus       156 ---~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL-  230 (259)
T d1xq1a_         156 ---SIYSATKGALNQLARNLACEWASDGIRANAVAP-AVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFL-  230 (259)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEC-CSCC-------------------------CCGGGGHHHHHHH-
T ss_pred             ---ccccccccchhhhhHHHHHHhcccCeEEEEecc-CcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHHHHHHH-
Confidence               679999999999999999999999999999999 888876                     22  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|+++.|+|||+|.||||++
T Consensus       231 -~S~~s~~iTG~~i~vDGG~s  250 (259)
T d1xq1a_         231 -CMPAASYITGQTICVDGGLT  250 (259)
T ss_dssp             -TSGGGTTCCSCEEECCCCEE
T ss_pred             -hCchhcCCcCcEEEeCCCEE
Confidence             99999999999999999974

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=1.9e-51  Score=339.84  Aligned_cols=221  Identities=24%  Similarity=0.314  Sum_probs=198.4

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++..  .++.++.+|++|+++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999988888777642  468889999999999999999999998


Q ss_pred             C-CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 G-KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 g-~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      + ++|++|||||...   ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||.    .+..+.+.. 
T Consensus        84 ~~~idilvnnAG~~~---~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~----~~~~~~~~~-  155 (259)
T d2ae2a_          84 HGKLNILVNNAGIVI---YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSV----SGALAVPYE-  155 (259)
T ss_dssp             TTCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCG----GGTSCCTTC-
T ss_pred             CCCceEEEECCceec---cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhccccccccccc----ccccccccc-
Confidence            6 7999999988654   357788999999999999999999999999999999999999999954    334444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--HHhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--IASIANAAL  231 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~~  231 (255)
                        ..|++||+|+++|+|+||.|++++|||||+|+| |.++|+                         ++  |+|++++++
T Consensus       156 --~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~  232 (259)
T d2ae2a_         156 --AVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGP-GVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA  232 (259)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHH
T ss_pred             --cchHHHHHHHHHHHHHHHHHhCcCceEEEEeee-CcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence              679999999999999999999999999999999 888775                         12  899999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +|+.+.|+|||+|.|||||.
T Consensus       233 fL--~S~~s~~itG~~i~VDGG~~  254 (259)
T d2ae2a_         233 FL--CFPAASYVTGQIIYVDGGLM  254 (259)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCchhCCCcCcEEEECCCeE
Confidence            99  99999999999999999984

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-51  Score=338.40  Aligned_cols=217  Identities=29%  Similarity=0.490  Sum_probs=193.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.++++  ++.++.+|++|+++++++++++.+++|+|
T Consensus         3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (250)
T d1ydea1           3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL   80 (250)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999999999999999998888875  67889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||....  ..++.+.+.++|++++++|+.++++++|+++|+|+++ +|+||++|    +..+..+.+..   ..
T Consensus        81 DilVnnAG~~~~--~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~G~Ii~is----S~~~~~~~~~~---~~  150 (250)
T d1ydea1          81 DCVVNNAGHHPP--PQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINIS----SLVGAIGQAQA---VP  150 (250)
T ss_dssp             CEEEECCCCCCC--CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEC----CHHHHHCCTTC---HH
T ss_pred             CEEEeccccccc--ccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC-CCCCcccc----cccccccccCc---ch
Confidence            999999886542  2456788999999999999999999999999999754 59999999    44444444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNM  234 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~  234 (255)
                      |++||+|+++|+++||.|++++|||||+|+| |.++|+                       +   +  |+|++++++|| 
T Consensus       151 Y~asKaal~~lt~~lA~e~a~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL-  228 (250)
T d1ydea1         151 YVATKGAVTAMTKALALDESPYGVRVNCISP-GNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFL-  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHH-
T ss_pred             hHHHHhhHHHHHHHHHHHhcccCeEEEEEee-CCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHH-
Confidence            9999999999999999999999999999999 887775                       1   2  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|+ ++|+|||+|.||||++
T Consensus       229 -~Sd-a~~itG~~i~vDGG~~  247 (250)
T d1ydea1         229 -ASE-ANFCTGIELLVTGGAE  247 (250)
T ss_dssp             -HHH-CTTCCSCEEEESTTTT
T ss_pred             -hCc-cCCCcCCeEEECCCcc
Confidence             886 7899999999999985

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1.6e-51  Score=340.72  Aligned_cols=219  Identities=26%  Similarity=0.359  Sum_probs=193.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |+||+++||||++|||+++|++|+++|++|++++|++ +.++++.+++.   ..++.++.+|++|+++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            6899999999999999999999999999999999975 44555544432   3578899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |+||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||.    .+..+.++.  
T Consensus        82 G~iDiLVnnAG~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~----~~~~~~~~~--  152 (260)
T d1x1ta1          82 GRIDILVNNAGIQH---TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA----HGLVASANK--  152 (260)
T ss_dssp             SCCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTSCCTTC--
T ss_pred             CCCcEEEeeccccc---CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc----cceeccCCc--
Confidence            99999999988654   367888999999999999999999999999999999889999999944    444444444  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------------Hh--HHh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------------EA--IAS  225 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------------~~--~~~  225 (255)
                       .+|++||+|+++|++.||.|++++|||||+|+| |.++|+                                ++  |+|
T Consensus       153 -~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped  230 (260)
T d1x1ta1         153 -SAYVAAKHGVVGFTKVTALETAGQGITANAICP-GWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ  230 (260)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred             -chhhhhhhhHHHhHHHHHHHhchhCcEEEEEec-CCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHH
Confidence             679999999999999999999999999999999 787765                                12  899


Q ss_pred             hhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.+++||  +|+.+.|+|||+|.|||||+
T Consensus       231 iA~~v~fL--~S~~a~~itG~~i~vDGG~t  258 (260)
T d1x1ta1         231 LGGTAVFL--ASDAAAQITGTTVSVDGGWT  258 (260)
T ss_dssp             HHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHH--hChhhCCCcCCEEEECcchh
Confidence            99999999  99999999999999999985

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=6.3e-51  Score=336.25  Aligned_cols=219  Identities=27%  Similarity=0.462  Sum_probs=196.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++ .++.++.+|++|+++++++++++.+++|+
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~   79 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIG-PAACAIALDVTDQASIDRCVAELLDRWGS   79 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CceEEEEeeCCCHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999999999998886 57889999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|.|.+ ++.|+||++||.    .+..+.+..   
T Consensus        80 iDilVnnAg~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~----~~~~~~~~~---  149 (256)
T d1k2wa_          80 IDILVNNAALFD---LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQ----AGRRGEALV---  149 (256)
T ss_dssp             CCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG----GGTSCCTTC---
T ss_pred             ccEEEeeccccc---ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccch----hhccccccc---
Confidence            999999988654   367788999999999999999999999999997654 457999999944    444444444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------H---h--HHhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------E---A--IASIA  227 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~---~--~~~~~  227 (255)
                      .+|++||+|+++|++.+|.|++++|||||+|+| |.++|+                            |   +  |+|++
T Consensus       150 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA  228 (256)
T d1k2wa_         150 GVYCATKAAVISLTQSAGLNLIRHGINVNAIAP-GVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLT  228 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHH
T ss_pred             cchhhhhhHHHHHHHHHHHHhcccCeEEEEEec-CCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHH
Confidence            779999999999999999999999999999999 887765                            1   2  99999


Q ss_pred             hhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          228 NAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       228 ~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      .+++||  +|++++|+|||+|.||||.
T Consensus       229 ~~v~fL--~S~~a~~iTG~~i~vDGG~  253 (256)
T d1k2wa_         229 GMAIFL--ATPEADYIVAQTYNVDGGN  253 (256)
T ss_dssp             HHHHHT--TSGGGTTCCSCEEEESTTS
T ss_pred             HHHHHH--hCchhCCccCceEEECcch
Confidence            999999  9999999999999999995

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=6.6e-51  Score=336.70  Aligned_cols=221  Identities=27%  Similarity=0.394  Sum_probs=193.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+|+||+++||||++|||+++|++|+++|++|++++|+.+ .++++.+++.  ..++.++++|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999999864 4555555543  247889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCC-cEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRG-CILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~-~ii~is~~~~~~~~~~~~~~~  177 (255)
                      +|+||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.+ +|+++||.    ....+.+..
T Consensus        83 ~G~iDiLVnnAG~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~----~~~~~~~~~  155 (261)
T d1geea_          83 FGKLDVMINNAGLEN---PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSV----HEKIPWPLF  155 (261)
T ss_dssp             HSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCG----GGTSCCTTC
T ss_pred             hCCCCEeeccceecC---CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccc----hhcccCccc
Confidence            999999999988654   3577889999999999999999999999999999877655 58889944    333344433


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYN  233 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l  233 (255)
                         .+|++||+|+++|+++||.|++++|||||+|+| |.++|+                   +   +  |+|++++++||
T Consensus       156 ---~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL  231 (261)
T d1geea_         156 ---VHYAASKGGMKLMTETLALEYAPKGIRVNNIGP-GAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWL  231 (261)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHH
T ss_pred             ---cccccCCccchhhHHHHHHHhhhhCcEEEEEee-CcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence               679999999999999999999999999999999 888876                   1   2  99999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +|+.+.|+|||+|.||||++
T Consensus       232 --~S~~s~~itG~~i~vDGG~s  251 (261)
T d1geea_         232 --ASSEASYVTGITLFADGGMT  251 (261)
T ss_dssp             --HSGGGTTCCSCEEEESTTGG
T ss_pred             --hCchhcCCcCCeEEECCCee
Confidence              99999999999999999984

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6e-51  Score=336.72  Aligned_cols=217  Identities=25%  Similarity=0.325  Sum_probs=193.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ||++|||||++|||+++|++|+++|++|++++|+++.++++.++++.  .++.++++|++|+++++++++++.+++|+||
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            79999999999999999999999999999999999888888777642  4788999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh--cCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM--VPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l--~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      +||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|  .+++.|+|+++|    +..+..+.+..   .
T Consensus        82 ilVnnAG~~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~----S~~~~~~~~~~---~  151 (257)
T d2rhca1          82 VLVNNAGRPG---GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIA----STGGKQGVVHA---A  151 (257)
T ss_dssp             EEEECCCCCC---CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEEC----CGGGTSCCTTC---H
T ss_pred             EEEecccccC---CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccc----ccccccccccc---h
Confidence            9999988654   3677889999999999999999999999999974  456678999999    44444444444   7


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhh
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIAN  228 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~  228 (255)
                      .|++||+|+.+|+|+||.|++++|||||+|+| |.++|+                               ++  |+|++.
T Consensus       152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~  230 (257)
T d2rhca1         152 PYSASKHGVVGFTKALGLELARTGITVNAVCP-GFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAE  230 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEE-CSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEee-CCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            79999999999999999999999999999999 787764                               12  899999


Q ss_pred             hhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          229 AALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       229 ~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++.||  +|++++|+|||+|.||||++
T Consensus       231 ~v~fL--~S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         231 MVAYL--IGPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             HHHHH--TSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHH--hCchhcCCcCceEEECcCcc
Confidence            99999  99999999999999999985

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=6.6e-51  Score=336.87  Aligned_cols=219  Identities=28%  Similarity=0.456  Sum_probs=196.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +|+||+++||||++|||++++++|+++|++|++++|+++.++++.++++.  .++.++.||++|+++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999888888777653  4788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....  ..++.+.+.++|++++++|+.++++++|+++|.|++++.|+||++|    +..+..+.+..   
T Consensus        82 ~iDilVnnaG~~~~--~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~is----S~~~~~~~~~~---  152 (260)
T d1zema1          82 KIDFLFNNAGYQGA--FAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTA----SMAGVKGPPNM---  152 (260)
T ss_dssp             CCCEEEECCCCCCC--CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC----CHHHHSCCTTB---
T ss_pred             CCCeehhhhccccc--cCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeee----chhhccCCcch---
Confidence            99999999876532  3578889999999999999999999999999999988999999999    44444444444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------------Hh--
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------------EA--  222 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------------~~--  222 (255)
                      ..|++||+|+++|++.||.|++++|||||+|+| |.++|+                                    ++  
T Consensus       153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~  231 (260)
T d1zema1         153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISP-GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGD  231 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEecc-CcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcC
Confidence            679999999999999999999999999999999 777653                                    12  


Q ss_pred             HHhhhhhhhhhhccCCCCCeeeceeEEecCC
Q 025252          223 IASIANAALYNMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      |+|++.++.||  +|+++.|+|||+|.||||
T Consensus       232 pedvA~~v~fL--~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         232 INEIPGVVAFL--LGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             GGGSHHHHHHH--HSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHHHHHH--hCchhcCccCCeEEeCCC
Confidence            89999999999  999999999999999998

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-50  Score=330.83  Aligned_cols=211  Identities=22%  Similarity=0.351  Sum_probs=185.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .++||+++||||++|||++++++|+++|++|++++|+++..         .++..+++|++|+++++++++++.+++|++
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   74 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP---------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPV   74 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC---------TTSEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh---------cCceEEEEecCCHHHHHHHHHHHHHhcCCc
Confidence            47999999999999999999999999999999999987653         357789999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+||++||..+    ..+.++.   .+
T Consensus        75 DiLVnnAG~~~---~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~----~~~~~~~---~~  144 (237)
T d1uzma1          75 EVLVSNAGLSA---DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSG----LWGIGNQ---AN  144 (237)
T ss_dssp             SEEEEECSCCC--------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC---------CC---HH
T ss_pred             eEEEeeecccc---cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhh----ccCCccc---HH
Confidence            99999988654   36788899999999999999999999999999999999999999995543    3333333   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |++||+|+++|++.||.|++++|||||+|+| |.++|+                    ++  |||+++++.||  +|+++
T Consensus       145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL--~S~~s  221 (237)
T d1uzma1         145 YAASKAGVIGMARSIARELSKANVTANVVAP-GYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVSFL--ASEDA  221 (237)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHHHH--HSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhhcCCceeeeeee-CcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hCchh
Confidence            9999999999999999999999999999999 888886                    12  99999999999  99999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .|+|||+|.+|||++
T Consensus       222 ~~itG~~i~vdGG~~  236 (237)
T d1uzma1         222 SYISGAVIPVDGGMG  236 (237)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             cCCcCCeEEECCCCC
Confidence            999999999999985

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=3.2e-50  Score=331.28  Aligned_cols=218  Identities=28%  Similarity=0.406  Sum_probs=195.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++ .+..++++|++++++++++++++.+++|++
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   81 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGTL   81 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999999999999999998886 578889999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++ ++|+||++||.    .+..+.+..   .+
T Consensus        82 DilVnnAG~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~-~~G~Iv~isS~----~~~~~~~~~---~~  150 (253)
T d1hxha_          82 NVLVNNAGILL---PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE-TGGSIINMASV----SSWLPIEQY---AG  150 (253)
T ss_dssp             CEEEECCCCCC---CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT-TCEEEEEECCG----GGTSCCTTB---HH
T ss_pred             CeEEecccccC---CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCceecccch----hhhcCcccc---cc
Confidence            99999988654   257788999999999999999999999999999965 46999999944    334444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhccc--CcEEeEeccCcchhhh-------------------------Hh--HHhhhhhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRY--GIRVDCVSHTYGLAMA-------------------------EA--IASIANAALYN  233 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~--gi~v~~v~p~~~~~t~-------------------------~~--~~~~~~~~~~l  233 (255)
                      |++||+|+.+|++++|.|++++  |||||+|+| |.++|+                         ++  |||++.+++||
T Consensus       151 Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL  229 (253)
T d1hxha_         151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHP-DGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFL  229 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE-SEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHH
T ss_pred             ccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeE-CCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHH
Confidence            9999999999999999999875  599999999 878775                         12  89999999999


Q ss_pred             hccCCCCCeeeceeEEecCCcC
Q 025252          234 MAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       234 ~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        +|++++|+|||+|.|||||.
T Consensus       230 --~S~~s~~itG~~i~VDGG~~  249 (253)
T d1hxha_         230 --ASDESSVMSGSELHADNSIL  249 (253)
T ss_dssp             --HSGGGTTCCSCEEEESSSCT
T ss_pred             --hChhhCCCcCcEEEECccHh
Confidence              99999999999999999984

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.3e-50  Score=331.84  Aligned_cols=217  Identities=24%  Similarity=0.354  Sum_probs=192.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|+++||||++|||+++|++|+++|++|++++|+++.++++.+++.  ..++.++++|++|+++++++++++.+++|+||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            4789999999999999999999999999999999998888877764  25788999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      +||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|.+++ .++|+++||.    .+..+.+..   ..
T Consensus        81 ilVnnAG~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~----~~~~~~~~~---~~  150 (255)
T d1gega_          81 VIVNNAGVAP---STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQ----AGHVGNPEL---AV  150 (255)
T ss_dssp             EEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG----GGTSCCTTB---HH
T ss_pred             EEEecccccc---cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccch----hhcccCccc---cc
Confidence            9999988654   36788899999999999999999999999999876654 5789999944    334444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------Hh--HHhhhhh
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------EA--IASIANA  229 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------~~--~~~~~~~  229 (255)
                      |++||+|+++|+++||.|++++|||||+|+| |.++|+                               ++  |+|++++
T Consensus       151 Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~  229 (255)
T d1gega_         151 YSSSKFAVRGLTQTAARDLAPLGITVNGYCP-GIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAAC  229 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHH
T ss_pred             chhCHHHHHhhHHHHHHHhhhhCcEEEEEec-CcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHH
Confidence            9999999999999999999999999999999 788775                               12  8999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +|++++|+|||+|.||||+.
T Consensus       230 v~fL--~S~~a~~itG~~i~vDGG~~  253 (255)
T d1gega_         230 VSYL--ASPDSDYMTGQSLLIDGGMV  253 (255)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESSSSS
T ss_pred             HHHH--hCchhCCccCcEEEecCCEE
Confidence            9999  99999999999999999983

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2.4e-50  Score=330.31  Aligned_cols=216  Identities=23%  Similarity=0.383  Sum_probs=191.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEe-cCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIAD-VQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~-r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      ++++||||++|||++++++|+++|++|++.+ |+++.++++.++++  ..++.++++|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4899999999999999999999999999875 45566666665553  25788999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +|||||+...   ..++.+.+.++|++++++|+.++++++|+++|+|+++++|+||++||    ..+..+.++.   ..|
T Consensus        82 iLVnnAg~~~---~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS----~~~~~~~~~~---~~Y  151 (244)
T d1edoa_          82 VVVNNAGITR---DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIAS----VVGLIGNIGQ---ANY  151 (244)
T ss_dssp             EEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC----THHHHCCTTC---HHH
T ss_pred             cccccccccc---ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcC----hhhcCCCCCC---HHH
Confidence            9999987654   35788899999999999999999999999999999889999999994    4444444444   779


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhcc-CCCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAK-DDDT  240 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~-~~~~  240 (255)
                      ++||+|+++|++.||.|++++|||||+|+| |.++|+                    ++  |+|+++++.||  + |+++
T Consensus       152 ~asKaal~~ltk~lA~el~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL--a~S~~a  228 (244)
T d1edoa_         152 AAAKAGVIGFSKTAAREGASRNINVNVVCP-GFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFL--ALSPAA  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEE-CSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHH--HHCSGG
T ss_pred             HHHHHHHHHChHHHHHHHhhhCcEEEEEec-ceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--HCCchh
Confidence            999999999999999999999999999999 888886                    12  99999999999  7 8999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      +|+|||+|.+|||++
T Consensus       229 ~~itG~~i~vdGG~s  243 (244)
T d1edoa_         229 SYITGQAFTIDGGIA  243 (244)
T ss_dssp             GGCCSCEEEESTTTT
T ss_pred             cCCcCCeEEeCCCee
Confidence            999999999999985

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=7.7e-50  Score=330.59  Aligned_cols=229  Identities=22%  Similarity=0.306  Sum_probs=194.1

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .++++||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.   ..++.++++|++++++++++++++.+
T Consensus         4 ~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (260)
T d1h5qa_           4 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   83 (260)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            467899999999999999999999999999999999999888777665542   25788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|++|+|||||+...   ..++.+.+.++|++++++|+.++++++|.+.|+|.+ +..++|+++++............+
T Consensus        84 ~~g~iDilVnnAg~~~---~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~  160 (260)
T d1h5qa_          84 DLGPISGLIANAGVSV---VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  160 (260)
T ss_dssp             HSCSEEEEEECCCCCC---CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HhCCCcEecccccccc---cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccccccccccccc
Confidence            9999999999987654   367788999999999999999999999999999854 456777777744322211111111


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------H---h--HHhhhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------E---A--IASIANAALYNM  234 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~---~--~~~~~~~~~~l~  234 (255)
                      ......|++||+|+.+|++.||.|++++|||||+|+| |.++|+                 +   +  |||++++++|| 
T Consensus       161 ~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL-  238 (260)
T d1h5qa_         161 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSP-GYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQAILL-  238 (260)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHHHHHH-
T ss_pred             CccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCC-CcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH-
Confidence            1122679999999999999999999999999999999 888876                 1   2  89999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|++++|+|||+|.||||+.
T Consensus       239 -~S~~s~~itG~~i~VDGG~~  258 (260)
T d1h5qa_         239 -LSDHATYMTGGEYFIDGGQL  258 (260)
T ss_dssp             -HSGGGTTCCSCEEEECTTGG
T ss_pred             -hcchhCCCcCceEEECCCee
Confidence             99999999999999999984

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-49  Score=331.67  Aligned_cols=222  Identities=25%  Similarity=0.361  Sum_probs=192.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..     .++.++.+|++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999888887776532     4688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++|+||++|||||...... ....+.+.++|++++++|+.++++++|+++|+|++++.++|+++||.    ....+.++.
T Consensus        81 ~~G~iDilVnnAG~~~~~~-~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~----~~~~~~~~~  155 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADG-TANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIV----AGPQAHSGY  155 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCS-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGG----GSSSCCTTS
T ss_pred             HcCCceEEEeecccccccc-cccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhh----hccccCCCC
Confidence            9999999999987543221 34456688999999999999999999999999998888889888843    223333333


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------H---h--HHhh
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------E---A--IASI  226 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~---~--~~~~  226 (255)
                         .+|++||+|+++|||+||.|++++|||||+|+| |.++|+                          |   +  |+|+
T Consensus       156 ---~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pedi  231 (274)
T d1xhla_         156 ---PYYACAKAALDQYTRCTAIDLIQHGVRVNSVSP-GAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEI  231 (274)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHH
T ss_pred             ---ceehhhhhHHHHHHHHHHHHHhHhCCceeeecc-CCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHH
Confidence               679999999999999999999999999999999 887764                          1   2  8999


Q ss_pred             hhhhhhhhccCC-CCCeeeceeEEecCCcC
Q 025252          227 ANAALYNMAKDD-DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       227 ~~~~~~l~~~~~-~~~~~~G~~i~~dgG~~  255 (255)
                      +.+++||  +|+ .+.|+|||+|.||||++
T Consensus       232 A~~v~fL--~S~d~s~~itG~~i~vDGG~~  259 (274)
T d1xhla_         232 ANIIVFL--ADRNLSSYIIGQSIVADGGST  259 (274)
T ss_dssp             HHHHHHH--HCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHH--cCCccccCccCcEEEeCcCHH
Confidence            9999999  884 68999999999999974

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-49  Score=325.66  Aligned_cols=215  Identities=24%  Similarity=0.327  Sum_probs=189.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |+++||++|||||++|||++++++|+++|++|++++|+++.++++.++++  ++.++.+|++|++++++++    +++|+
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~~~~~v~~~~----~~~g~   74 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECP--GIEPVCVDLGDWDATEKAL----GGIGP   74 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHH----TTCCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHH----HHcCC
Confidence            57899999999999999999999999999999999999999888888875  5788999999999877655    45799


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhc-CCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMV-PRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ||+||||||...   ..++.+.+.++|++++++|+.++++++|.++|.|. ++.+|+||++||.    ....+.+..   
T Consensus        75 iDilVnnAg~~~---~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~----~~~~~~~~~---  144 (242)
T d1cyda_          75 VDLLVNNAALVI---MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSM----VAHVTFPNL---  144 (242)
T ss_dssp             CSEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG----GGTSCCTTB---
T ss_pred             CeEEEECCcccc---chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchh----hccccCCcc---
Confidence            999999988654   36788899999999999999999999999999854 4467899999944    333344434   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||+|+.+|+++||.|++++|||||+|+| |.++|+                   +   +  |||++.++.||  +
T Consensus       145 ~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL--~  221 (242)
T d1cyda_         145 ITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP-TVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFL--L  221 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHH--H
T ss_pred             ccccchHHHHHHHHHHHHHHhCccCeecccCCC-CCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence            679999999999999999999999999999999 888876                   1   2  99999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+++.|+|||+|.|||||.
T Consensus       222 S~~s~~itG~~i~vDGG~~  240 (242)
T d1cyda_         222 SDRSASTSGGGILVDAGYL  240 (242)
T ss_dssp             SGGGTTCCSSEEEESTTGG
T ss_pred             CchhcCcCCceEEeCcchh
Confidence            9999999999999999984

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=2.5e-49  Score=326.82  Aligned_cols=221  Identities=23%  Similarity=0.301  Sum_probs=197.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++|+||+++||||++|||++++++|+++|++|++++|+++.++++.+++..  ..+.++.+|++++++++++++++.+.+
T Consensus         2 f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   81 (258)
T d1ae1a_           2 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   81 (258)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            578999999999999999999999999999999999999888887777642  567888999999999999999999998


Q ss_pred             -CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          100 -GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       100 -g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       |.+|++||||+...   ..++.+.+.++|++++++|+.++++++++++|.|++++.|+|+++||    ..+..+.+.. 
T Consensus        82 ~g~idilinnag~~~---~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS----~~~~~~~~~~-  153 (258)
T d1ae1a_          82 DGKLNILVNNAGVVI---HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSS----IAGFSALPSV-  153 (258)
T ss_dssp             TSCCCEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECC----GGGTSCCTTC-
T ss_pred             CCCcEEEeccccccc---cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccc----cccccccccc-
Confidence             68999999987665   35778899999999999999999999999999999999999999994    4444444444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------------Hh--HHhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------------EA--IASIANAA  230 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------------~~--~~~~~~~~  230 (255)
                        ..|+++|+|+++|++.||+|++++|||||+|+| |.++|+                          ++  |+|+++++
T Consensus       154 --~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v  230 (258)
T d1ae1a_         154 --SLYSASKGAINQMTKSLACEWAKDNIRVNSVAP-GVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALI  230 (258)
T ss_dssp             --HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHH
T ss_pred             --hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEee-CcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence              679999999999999999999999999999999 888775                          12  99999999


Q ss_pred             hhhhccCCCCCeeeceeEEecCCcC
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +||  +|+++.|+|||+|.|||||+
T Consensus       231 ~fL--~S~~s~~itG~~i~vDGG~s  253 (258)
T d1ae1a_         231 AFL--CFPAASYITGQIIWADGGFT  253 (258)
T ss_dssp             HHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHH--hChhhCCCcCcEEEeCCCee
Confidence            999  99999999999999999985

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.2e-49  Score=331.46  Aligned_cols=223  Identities=25%  Similarity=0.341  Sum_probs=189.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++..     .++.+++||++|+++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999999999999999999999999999999988888777632     4688999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCc-cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGF-VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|++|+||||||......+ ....+.+.++|++++++|+.++++++|+++|+|++++.+.|+++|+    .....+.+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss----~a~~~~~~~  157 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSI----VAGPQAQPD  157 (272)
T ss_dssp             HHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCG----GGSSSCCCS
T ss_pred             HhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccch----hccccCCCC
Confidence            99999999999876653322 2334677889999999999999999999999998765554444442    222333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--HHh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--IAS  225 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~~~  225 (255)
                      .   ..|++||+|+++|+++||.|++++|||||+|+| |.++|+                             ++  |+|
T Consensus       158 ~---~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~ped  233 (272)
T d1xkqa_         158 F---LYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSP-GMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEH  233 (272)
T ss_dssp             S---HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             c---chhhhHHHHHHHHHHHHHHHhcccCeEEEEEee-CCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHH
Confidence            3   679999999999999999999999999999999 887764                             12  899


Q ss_pred             hhhhhhhhhccCCC-CCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDDD-TSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~~-~~~~~G~~i~~dgG~~  255 (255)
                      ++.++.||  +|++ +.|+|||+|.||||++
T Consensus       234 iA~~v~fL--~S~~as~~iTG~~i~vDGG~~  262 (272)
T d1xkqa_         234 IANIILFL--ADRNLSFYILGQSIVADGGTS  262 (272)
T ss_dssp             HHHHHHHH--HCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHH--hCcchhCCccCeEEEeCcCHH
Confidence            99999999  8865 5799999999999984

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.3e-49  Score=329.96  Aligned_cols=223  Identities=27%  Similarity=0.338  Sum_probs=183.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +|+||+++||||++|||+++|++|+++|++|++++|+++.++++.+++.     ..++.++.+|++++++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5799999999999999999999999999999999999988888877653     24689999999999999999999999


Q ss_pred             HcCCccEEEEcCCCcccc-CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYR-GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      ++|++|+||||||..... ....+.+.+.++|++++++|+.++++++|+++|+|++++ |.+|+++|...   ...+.+.
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~S~~~---~~~~~~~  157 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIAS---GLHATPD  157 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTS---SSSCCTT
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc-Ccceeeeeecc---ccccCCC
Confidence            999999999998765322 223456679999999999999999999999999997665 55555553321   1222333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------Hh--HHh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------EA--IAS  225 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~~--~~~  225 (255)
                      .   ..|++||+|+++|+++||.|++++|||||+|+| |.++|+                             ++  |+|
T Consensus       158 ~---~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped  233 (264)
T d1spxa_         158 F---PYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISP-GLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQD  233 (264)
T ss_dssp             S---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBCCCC--------------HHHHHHHHHHCTTSSCBCHHH
T ss_pred             c---hhhhhhhhhHHHHHHHHHHHhcccCeEEEEEee-CCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHH
Confidence            3   669999999999999999999999999999999 877764                             12  899


Q ss_pred             hhhhhhhhhccCC-CCCeeeceeEEecCCcC
Q 025252          226 IANAALYNMAKDD-DTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       226 ~~~~~~~l~~~~~-~~~~~~G~~i~~dgG~~  255 (255)
                      +++++.||  +|+ .++|+|||+|.||||++
T Consensus       234 vA~~v~fL--~S~~~s~~itG~~i~vDGG~s  262 (264)
T d1spxa_         234 IAEVIAFL--ADRKTSSYIIGHQLVVDGGSS  262 (264)
T ss_dssp             HHHHHHHH--HCHHHHTTCCSCEEEESTTGG
T ss_pred             HHHHHHHH--hCCcccCCccCceEEeCCChh
Confidence            99999999  885 48999999999999985

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=324.00  Aligned_cols=215  Identities=25%  Similarity=0.335  Sum_probs=189.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      +.|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++  ++.++.+|++|++++++++    +++|+
T Consensus         3 ~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~--~~~~~~~Dv~d~~~v~~~~----~~~g~   76 (244)
T d1pr9a_           3 LFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP--GIEPVCVDLGDWEATERAL----GSVGP   76 (244)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST--TCEEEECCTTCHHHHHHHH----TTCCC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC--CCeEEEEeCCCHHHHHHHH----HHhCC
Confidence            45899999999999999999999999999999999999999998888875  5788999999999887665    45799


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHh-cCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVM-VPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l-~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ||+|||||+...   ..++.+.+.++|++++++|+.+++++++.++|.| ++++.|+|+++||.    .+..+.+..   
T Consensus        77 iDilVnnAg~~~---~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~----~~~~~~~~~---  146 (244)
T d1pr9a_          77 VDLLVNNAAVAL---LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQ----CSQRAVTNH---  146 (244)
T ss_dssp             CCEEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG----GGTSCCTTB---
T ss_pred             ceEEEecccccc---ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccc----cccccccch---
Confidence            999999987654   3678889999999999999999999999999965 45567999999944    334444433   


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhhhhhcc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAALYNMAK  236 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~~l~~~  236 (255)
                      ..|++||+|+++|++.+|.|++++|||||+|+| |.++|+                   |   +  |+|+++++.||  +
T Consensus       147 ~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL--~  223 (244)
T d1pr9a_         147 SVYCSTKGALDMLTKVMALELGPHKIRVNAVNP-TVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFL--L  223 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHH--H
T ss_pred             hhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEee-CcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHH--h
Confidence            679999999999999999999999999999999 888876                   1   2  99999999999  9


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      |+.+.|+|||+|.|||||+
T Consensus       224 S~~a~~itG~~i~vDGG~~  242 (244)
T d1pr9a_         224 SDRSGMTTGSTLPVEGGFW  242 (244)
T ss_dssp             SGGGTTCCSCEEEESTTGG
T ss_pred             CchhCCcCCcEEEECccHh
Confidence            9999999999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-49  Score=331.07  Aligned_cols=219  Identities=29%  Similarity=0.400  Sum_probs=193.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-------CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-------HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      .|+||+++||||++|||+++|++|+++|++|++++|+++.+++..+++.       ..++.++++|++|+++++++++++
T Consensus         9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~   88 (297)
T d1yxma1           9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST   88 (297)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence            3799999999999999999999999999999999999888777766552       247899999999999999999999


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      .+.+|++|+|||||+...   ..++.+.+.++|++++++|+.++++++|+++|.|++++.++|+++|+.+.     ...+
T Consensus        89 ~~~~G~iDiLVnnAg~~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~-----~~~~  160 (297)
T d1yxma1          89 LDTFGKINFLVNNGGGQF---LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK-----AGFP  160 (297)
T ss_dssp             HHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT-----TCCT
T ss_pred             HHHhCCeEEEEeeccccc---cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc-----cccc
Confidence            999999999999987654   36788899999999999999999999999999999998999998874321     1122


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------Hh--HHhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------EA--IASIANA  229 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------~~--~~~~~~~  229 (255)
                      ..   ..|++||+|+++|+|++|.|++++|||||+|+| |.++|+                        ++  |+|++.+
T Consensus       161 ~~---~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~  236 (297)
T d1yxma1         161 LA---VHSGAARAGVYNLTKSLALEWACSGIRINCVAP-GVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSV  236 (297)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-CSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHH
T ss_pred             cc---ccchhHHHHHHHHHHHHHHHhcccCceEEEeee-CcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            22   679999999999999999999999999999999 777664                        12  9999999


Q ss_pred             hhhhhccCCCCCeeeceeEEecCCcC
Q 025252          230 ALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       230 ~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ++||  +|+.+.|+|||+|.||||++
T Consensus       237 v~fL--~Sd~s~~iTG~~i~VDGG~s  260 (297)
T d1yxma1         237 VCFL--LSPAASFITGQSVDVDGGRS  260 (297)
T ss_dssp             HHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHH--hCchhcCcCCcEEEeCcChh
Confidence            9999  99999999999999999974

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=2e-48  Score=318.41  Aligned_cols=216  Identities=30%  Similarity=0.468  Sum_probs=187.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++||+++||||++|||+++|++|+++|++|++++|+.+.+++..++++ .++.++++|++++++++++++++.+.+|++
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~Dls~~~~i~~~~~~i~~~~g~i   80 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFGRL   80 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CceEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence            3789999999999999999999999999999999999999888888876 578899999999999999999999999999


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+|||||+...   ..++.+.+.++|++++++|+.+++.++|+++|+|.+  .+.|+++|+.+..     ..++.   ..
T Consensus        81 DiLinnAg~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~--~~~i~~~ss~a~~-----~~~~~---~~  147 (241)
T d2a4ka1          81 HGVAHFAGVAH---SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEE--GGSLVLTGSVAGL-----GAFGL---AH  147 (241)
T ss_dssp             CEEEEGGGGTT---TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCT--TCEEEEECCCTTC-----CHHHH---HH
T ss_pred             cEecccccccc---ccchhhhhcccccccccccccccccccccccccccc--ccceeeccccccc-----cccCc---cc
Confidence            99999987654   367889999999999999999999999999999853  3556666643321     11222   56


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      |+++|+|+++|++.||+|++++|||||+|+| |.++|+                    ++  |+|+++++.||  +|+.+
T Consensus       148 Y~~sK~al~~lt~~lA~el~~~gIrvN~I~P-G~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL--~S~~s  224 (241)
T d2a4ka1         148 YAAGKLGVVGLARTLALELARKGVRVNVLLP-GLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL--LSEES  224 (241)
T ss_dssp             HHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE-CSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH--HSGGG
T ss_pred             cchhhHHHHHHHHHHHHHHhHhCCEEeeecc-CcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHH--hcchh
Confidence            9999999999999999999999999999999 888876                    12  99999999999  99999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .|+||++|.+||||+
T Consensus       225 ~~itG~~i~vDGG~s  239 (241)
T d2a4ka1         225 AYITGQALYVDGGRS  239 (241)
T ss_dssp             TTCCSCEEEESTTTT
T ss_pred             CCCcCceEEeCCCcc
Confidence            999999999999985

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=1.8e-48  Score=324.83  Aligned_cols=221  Identities=26%  Similarity=0.381  Sum_probs=189.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |+|+||+++||||++|||+++|++|+++|++|++++|+++.++++.++++ .++.++.+|++++++++++++++.+++|+
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   79 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG-DNVLGIVGDVRSLEDQKQAASRCVARFGK   79 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CCeeEEecccccHHHHHHHHHHHHHHhCC
Confidence            46899999999999999999999999999999999999998888888775 57899999999999999999999999999


Q ss_pred             ccEEEEcCCCccccCc--cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          102 LDILVNSGCNLEYRGF--VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       102 id~li~~a~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      +|++|||||.......  ....+.+.+.|++++++|+.++++++|+++|+|+++ +|+||+++|.    .+..+.+..  
T Consensus        80 idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~-~g~iI~i~S~----~~~~~~~~~--  152 (276)
T d1bdba_          80 IDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVAS-RGNVIFTISN----AGFYPNGGG--  152 (276)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCG----GGTSTTSSC--
T ss_pred             cccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhc-CCCceeeeec----hhccCCCCC--
Confidence            9999999886543211  123344556799999999999999999999999765 4788888843    333344444  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------------------Hh--HHhhh
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------------------EA--IASIA  227 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------------------~~--~~~~~  227 (255)
                       ..|++||+|+++|+|+||.|++++ ||||+|+| |.++|+                              ++  |+|++
T Consensus       153 -~~Y~asKaal~~ltr~lA~ela~~-IrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva  229 (276)
T d1bdba_         153 -PLYTAAKHAIVGLVRELAFELAPY-VRVNGVGS-GGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYT  229 (276)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEEE-CCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGS
T ss_pred             -chHHHHHHHHHHHHHHHHHHhhcc-eEEcccCC-CCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHH
Confidence             679999999999999999999975 99999999 777764                              12  99999


Q ss_pred             hhhhhhhccC-CCCCeeeceeEEecCCcC
Q 025252          228 NAALYNMAKD-DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       228 ~~~~~l~~~~-~~~~~~~G~~i~~dgG~~  255 (255)
                      .+++||  +| +.++|+|||+|.||||++
T Consensus       230 ~~v~fL--~S~~~a~~itG~~i~VDGG~~  256 (276)
T d1bdba_         230 GAYVFF--ATRGDAAPATGALLNYDGGLG  256 (276)
T ss_dssp             HHHHHH--HCHHHHTTCSSCEEEESSSGG
T ss_pred             HHHHHH--cCCcccCCeeCcEEEECcChh
Confidence            999999  88 479999999999999984

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=5.1e-49  Score=324.12  Aligned_cols=212  Identities=21%  Similarity=0.244  Sum_probs=186.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      |+|||||++|||+++|++|+++|++|++++|+.+.++++....    ..+.++|+++.++++++++++.+++|+||+|||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVn   77 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA----ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS   77 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH----HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh----CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            7999999999999999999999999999999988777665432    224568999999999999999999999999999


Q ss_pred             cCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccch
Q 025252          108 SGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSK  187 (255)
Q Consensus       108 ~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asK  187 (255)
                      |||...  ...++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++||..+    ..+.+..   ..|++||
T Consensus        78 NAg~~~--~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~----~~~~~~~---~~Y~asK  148 (252)
T d1zmta1          78 NDIFAP--EFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP----FGPWKEL---STYTSAR  148 (252)
T ss_dssp             ECCCCC--CCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT----TSCCTTC---HHHHHHH
T ss_pred             CCcCCC--CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccc----ccccccc---ccccccc
Confidence            987543  235788899999999999999999999999999999988999999995543    3333333   6799999


Q ss_pred             HHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------------Hh--HHhhhhhhhhhhccC
Q 025252          188 FGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       188 aa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------------~~--~~~~~~~~~~l~~~~  237 (255)
                      +|+++|+|+||.|++++|||||+|+| |.++|+                            |+  |||++.++.||  +|
T Consensus       149 aal~~lt~~lA~ela~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL--~S  225 (252)
T d1zmta1         149 AGACTLANALSKELGEYNIPVFAIGP-NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFL--AS  225 (252)
T ss_dssp             HHHHHHHHHHHHHHGGGTCCEEEEEE-SSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHH--HT
T ss_pred             ccHHHHHHHHHHHhcccCcEEEEEec-CCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hC
Confidence            99999999999999999999999999 777654                            12  99999999999  99


Q ss_pred             CCCCeeeceeEEecCCcC
Q 025252          238 DDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       238 ~~~~~~~G~~i~~dgG~~  255 (255)
                      +.++|+|||+|.|||||+
T Consensus       226 ~~s~~iTG~~i~vdGG~~  243 (252)
T d1zmta1         226 GSCDYLTGQVFWLAGGFP  243 (252)
T ss_dssp             TSCGGGTTCEEEESTTCC
T ss_pred             chhcCCcCCeEEECCCce
Confidence            999999999999999985

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.1e-48  Score=323.89  Aligned_cols=219  Identities=23%  Similarity=0.330  Sum_probs=190.4

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---------chHHHHHHHhCCCceEEEEeeCCCHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---------NLGQALADKLGHQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   91 (255)
                      +|+++||+++||||++|||+++|++|+++|++|++.+++.         +.++++.++++ .......+|+++.++++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIR-RRGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHH-HTTCEEEEECCCGGGHHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHh-hcccccccccchHHHHHHH
Confidence            4789999999999999999999999999999999987653         34555555554 3456678999999999999


Q ss_pred             HHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc
Q 025252           92 VDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE  171 (255)
Q Consensus        92 ~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~  171 (255)
                      ++++.+++|+||+||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||++|    |..+.
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~---~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~is----S~~~~  153 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILR---DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA----SASGI  153 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC----CHHHH
T ss_pred             HHHHHHHcCCCCEEEECCccCC---CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeC----Chhhc
Confidence            9999999999999999988764   3678899999999999999999999999999999988899999999    44444


Q ss_pred             ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------Hh--HHhhhhhhhhhhccCCC
Q 025252          172 IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------EA--IASIANAALYNMAKDDD  239 (255)
Q Consensus       172 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------~~--~~~~~~~~~~l~~~~~~  239 (255)
                      .+.++.   ..|++||+|+.+|+++|+.|++++|||||+|+| +.+.+.          ++  |||++++++||  +|+.
T Consensus       154 ~~~~~~---~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~P-G~~~t~~~~~~~~~~~~~~~PedvA~~v~fL--~S~~  227 (302)
T d1gz6a_         154 YGNFGQ---ANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAP-NAGSRMTETVMPEDLVEALKPEYVAPLVLWL--CHES  227 (302)
T ss_dssp             HCCTTC---HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEE-ECCSTTTGGGSCHHHHHHSCGGGTHHHHHHH--TSTT
T ss_pred             CCCCCc---HHHHHHHHHHHHHHHHHHHHHhccCCceeeeCC-CCCCcchhhcCcHhhHhcCCHHHHHHHHHHH--cCCC
Confidence            444444   779999999999999999999999999999999 666554          22  99999999999  8876


Q ss_pred             CCeeeceeEEecCCc
Q 025252          240 TSYVGKQNLLVNGGF  254 (255)
Q Consensus       240 ~~~~~G~~i~~dgG~  254 (255)
                      + ++|||+|.|||||
T Consensus       228 a-~itG~~i~vdGG~  241 (302)
T d1gz6a_         228 C-EENGGLFEVGAGW  241 (302)
T ss_dssp             C-CCCSCEEEEETTE
T ss_pred             c-CCCCcEEEeCCCc
Confidence            5 8999999999997

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.6e-47  Score=315.99  Aligned_cols=224  Identities=22%  Similarity=0.233  Sum_probs=189.0

Q ss_pred             ceeeecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ..++|+||+++||||++  |||+++|++|+++|++|++++|+++..++..+... ..+..++++|++|+++++++++++.
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVK   81 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHH
Confidence            35789999999999986  99999999999999999999998766555443322 2467889999999999999999999


Q ss_pred             HHcCCccEEEEcCCCccc-cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252           97 AKFGKLDILVNSGCNLEY-RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                      +++|++|+|||||+.... .....+.+.+.++|+..+++|+.+++.+++.+.|.|++  +|+||++||.    ....+.+
T Consensus        82 ~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~--~G~Iv~isS~----~~~~~~~  155 (256)
T d1ulua_          82 EAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE--GGGIVTLTYY----ASEKVVP  155 (256)
T ss_dssp             HHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE--EEEEEEEECG----GGTSBCT
T ss_pred             HhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc--CCEEEEEeeh----HhcCCCC
Confidence            999999999999876532 22235667889999999999999999999999999854  5899999944    3333444


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------H---h--HHhhhhhhh
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------E---A--IASIANAAL  231 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~---~--~~~~~~~~~  231 (255)
                      ..   ..|++||+|+++|++++|.|++++|||||+|+| +.++|+                   |   +  |+|+++++.
T Consensus       156 ~~---~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~P-G~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~  231 (256)
T d1ulua_         156 KY---NVMAIAKAALEASVRYLAYELGPKGVRVNAISA-GPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGL  231 (256)
T ss_dssp             TC---HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHH
T ss_pred             Cc---hHHHHHHHHHHHHHHHHHHHhcccCCEEeeecc-ceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            34   679999999999999999999999999999999 777765                   1   2  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCcC
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      ||  +|++++|+|||+|.|||||+
T Consensus       232 fL--~S~~s~~itG~~i~VDGG~~  253 (256)
T d1ulua_         232 FL--LSPLASGITGEVVYVDAGYH  253 (256)
T ss_dssp             HH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HH--hCchhCCccCCeEEECcCEe
Confidence            99  99999999999999999984

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.4e-47  Score=310.79  Aligned_cols=206  Identities=20%  Similarity=0.315  Sum_probs=178.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+||++|||||++|||++++++|+++|++|++++|+++.+++       ....++.+|+++.      ++.+.+++|++|
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~~~~~~~Dv~~~------~~~~~~~~g~iD   68 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SGHRYVVCDLRKD------LDLLFEKVKEVD   68 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TCSEEEECCTTTC------HHHHHHHSCCCS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cCCcEEEcchHHH------HHHHHHHhCCCc
Confidence            689999999999999999999999999999999998765543       2345678999863      445667789999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||...   ..++.+.+.++|++++++|+.++++++|+++|+|++++.|+||+++|..    ...+.+..   ..|
T Consensus        69 ~lVnnAG~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~----~~~~~~~~---~~Y  138 (234)
T d1o5ia_          69 ILVLNAGGPK---AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFS----VISPIENL---YTS  138 (234)
T ss_dssp             EEEECCCCCC---CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGG----GTSCCTTB---HHH
T ss_pred             EEEecccccC---CcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccccccccccc----cccccccc---ccc
Confidence            9999987653   3577889999999999999999999999999999988899999999543    33333333   679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhccCCCC
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~~~~~  240 (255)
                      ++||+|+++|+|.+|.|++++|||||+|+| |.++|+                     ++  |||++.+++||  +|+++
T Consensus       139 ~asKaal~~ltk~lA~ela~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL--~S~~s  215 (234)
T d1o5ia_         139 NSARMALTGFLKTLSFEVAPYGITVNCVAP-GWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFL--CSEKA  215 (234)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH--HSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCeEEeeccc-CccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--hChhh
Confidence            999999999999999999999999999999 888776                     12  99999999999  99999


Q ss_pred             CeeeceeEEecCCcC
Q 025252          241 SYVGKQNLLVNGGFR  255 (255)
Q Consensus       241 ~~~~G~~i~~dgG~~  255 (255)
                      .|+|||+|.|||||+
T Consensus       216 ~~itG~~i~vDGG~s  230 (234)
T d1o5ia_         216 SYLTGQTIVVDGGLS  230 (234)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             cCCcCcEEEECcccc
Confidence            999999999999985

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=2.9e-46  Score=305.22  Aligned_cols=214  Identities=21%  Similarity=0.276  Sum_probs=189.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCE-------EEEEecCcchHHHHHHHhCC--CceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAK-------VVIADVQDNLGQALADKLGH--QDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~-------v~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ++++||||++|||+++|++|+++|++       |++.+|+++.++++.+++..  .++.++.+|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999997       89999999988888877643  4688899999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                      ++|++|+||||||...   ..++.+.+.++|++++++|+.++++++|.++|+|++++.|+|+++||.    .+..+.++.
T Consensus        82 ~~g~iDilvnnAg~~~---~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~----~~~~~~~~~  154 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR---FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV----AATKAFRHS  154 (240)
T ss_dssp             HTSCCSEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG----GGTSCCTTC
T ss_pred             HcCCcceeeccccccc---CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech----hhcCCCCCC
Confidence            9999999999987654   367888999999999999999999999999999998889999999944    444444444


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------Hh--HHhhhhhhhhhhccCCCCCeee
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------EA--IASIANAALYNMAKDDDTSYVG  244 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------~~--~~~~~~~~~~l~~~~~~~~~~~  244 (255)
                         ..|++||+|+.+|+++|+.|++++|||||+|+| |.++|+           ++  |||++++++|+  +++.+.+++
T Consensus       155 ---~~Y~asK~al~~lt~~la~el~~~gIrvn~i~P-G~v~T~~~~~~~~~~~~~~~~PedvA~~v~~l--~s~~~~~~~  228 (240)
T d2bd0a1         155 ---SIYCMSKFGQRGLVETMRLYARKCNVRITDVQP-GAVYTPMWGKVDDEMQALMMMPEDIAAPVVQA--YLQPSRTVV  228 (240)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCBCSTTTCCCCSTTGGGSBCHHHHHHHHHHH--HTSCTTEEE
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeee-CcccCchhhhcCHhhHhcCCCHHHHHHHHHHH--HcCCccCcc
Confidence               779999999999999999999999999999999 888887           12  99999999999  888888888


Q ss_pred             cee-EEecCC
Q 025252          245 KQN-LLVNGG  253 (255)
Q Consensus       245 G~~-i~~dgG  253 (255)
                      |+. +..+||
T Consensus       229 ~~~~i~p~~G  238 (240)
T d2bd0a1         229 EEIILRPTSG  238 (240)
T ss_dssp             EEEEEEETTC
T ss_pred             CCEEEEecCC
Confidence            874 546665

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.4e-46  Score=309.94  Aligned_cols=224  Identities=22%  Similarity=0.357  Sum_probs=190.1

Q ss_pred             ccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHH
Q 025252           18 LSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        18 ~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .|.+.+|+||+++||||++|||++++++|+++|++|++++++. +.++++.+++.  ..++.++.+|++|++++++++++
T Consensus        10 ~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~   89 (272)
T d1g0oa_          10 GPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEE   89 (272)
T ss_dssp             SGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHH
Confidence            3455679999999999999999999999999999999998874 44555555443  25788999999999999999999


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccC
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~  174 (255)
                      +.+.+|++|++|||++...   ..++.+.+.++|++++++|+.++++++|+++|+|++  .+++++++|..+..   .+.
T Consensus        90 ~~~~~g~idilV~nag~~~---~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~--~g~~i~i~s~~~~~---~~~  161 (272)
T d1g0oa_          90 AVKIFGKLDIVCSNSGVVS---FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI--GGRLILMGSITGQA---KAV  161 (272)
T ss_dssp             HHHHHSCCCEEEECCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT--TCEEEEECCGGGTC---SSC
T ss_pred             HHHHhCCCCccccccccch---hhhhhhhhhhHHHHHhhhccceeeeecccccccccc--cccccccccccccc---ccc
Confidence            9999999999999976554   357788999999999999999999999999999965  46777777433211   111


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------------H
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------------E  221 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------------~  221 (255)
                      +.   ...|++||+|+++|+|.+|.||+++|||||+|+| |.++|+                                 +
T Consensus       162 ~~---~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR  237 (272)
T d1g0oa_         162 PK---HAVYSGSKGAIETFARCMAIDMADKKITVNVVAP-GGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR  237 (272)
T ss_dssp             SS---CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS
T ss_pred             cc---hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEcc-CCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCC
Confidence            22   2569999999999999999999999999999999 887764                                 1


Q ss_pred             h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  |+|++.++.||  +|+.++|+||++|.||||+.
T Consensus       238 ~~~peevA~~v~fL--~s~~s~~itG~~i~vDGG~~  271 (272)
T d1g0oa_         238 VGLPIDIARVVCFL--ASNDGGWVTGKVIGIDGGAC  271 (272)
T ss_dssp             CBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTCC
T ss_pred             CcCHHHHHHHHHHH--hCchhcCccCceEeECCCCC
Confidence            2  89999999999  99999999999999999974

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-46  Score=305.48  Aligned_cols=209  Identities=27%  Similarity=0.375  Sum_probs=182.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++||+++||||++|||+++|++|+++|++|++++|+.+.+++..+++.    ..++.++.+|++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999999999988888777664    2478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC---CCcEEEeccCCCcccccccCcC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR---RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~---~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      |++|+|||||+...           .++|++++++|+.+++++++.++|+|.+++   .|+||++||    ..+..+.+.
T Consensus        81 G~iDilVnnAg~~~-----------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS----~~~~~~~~~  145 (254)
T d2gdza1          81 GRLDILVNNAGVNN-----------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS----LAGLMPVAQ  145 (254)
T ss_dssp             SCCCEEEECCCCCC-----------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC----GGGTSCCTT
T ss_pred             CCcCeecccccccc-----------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeecc----HhhccCCCC
Confidence            99999999987543           346899999999999999999999997764   478999994    444444444


Q ss_pred             CCCCcccccchHHHHHHHHH--HHHHhcccCcEEeEeccCcchhhh-------------------------H---h--HH
Q 025252          177 NIPANYYGVSKFGILGLVKS--LAAELGRYGIRVDCVSHTYGLAMA-------------------------E---A--IA  224 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~--la~e~~~~gi~v~~v~p~~~~~t~-------------------------~---~--~~  224 (255)
                      .   .+|++||+|+.+|+|+  |+.|++++|||||+|+| |.++|+                         +   +  |+
T Consensus       146 ~---~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe  221 (254)
T d2gdza1         146 Q---PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICP-GFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPP  221 (254)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEE-SCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHH
T ss_pred             c---cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEc-CCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHH
Confidence            4   6799999999999996  79999999999999999 777764                         1   1  89


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |++++++||  +|+.  ++|||+|.||||+.
T Consensus       222 dvA~~v~fL--~s~~--~itG~~i~VdGG~~  248 (254)
T d2gdza1         222 LIANGLITL--IEDD--ALNGAIMKITTSKG  248 (254)
T ss_dssp             HHHHHHHHH--HHCT--TCSSCEEEEETTTE
T ss_pred             HHHHHHHHH--HcCC--CCCCCEEEECCCCe
Confidence            999999999  8765  49999999999973

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.1e-46  Score=308.71  Aligned_cols=218  Identities=24%  Similarity=0.389  Sum_probs=185.7

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC-cchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ-DNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~-~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .|.||++|||||++|||+++|+.|+++|++|++++++ ++..+++.+++.  ..++.++.+|++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            3789999999999999999999999999999987554 444566655553  2478899999999999999999999999


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      |+||++|||||...   ..++.+.+.++|++++++|+.++++++|.++|+|+++  +++++++|..+.   ..+.+..  
T Consensus        83 g~idilinnag~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~--g~~iii~s~~~~---~~~~~~~--  152 (259)
T d1ja9a_          83 GGLDFVMSNSGMEV---WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG--GRIILTSSIAAV---MTGIPNH--  152 (259)
T ss_dssp             SCEEEEECCCCCCC---CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE--EEEEEECCGGGT---CCSCCSC--
T ss_pred             CCCcEEEecccccc---ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcC--Cccccccccccc---ccCCCCc--
Confidence            99999999987654   3677889999999999999999999999999999654  566666633221   1122223  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------------------Hh--HH
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------------------EA--IA  224 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------------------~~--~~  224 (255)
                       ..|++||+|+++|+|.||+|++++|||||+|+| |.++|+                                 ++  |+
T Consensus       153 -~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~  230 (259)
T d1ja9a_         153 -ALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAP-GGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPA  230 (259)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEE-CCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHH
T ss_pred             -hhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCc-CCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHH
Confidence             679999999999999999999999999999999 877764                                 12  99


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCc
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      |++++++||  +|+.+.|+||++|.+|||+
T Consensus       231 eVa~~v~fL--~S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         231 DIGRAVSAL--CQEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             HHHHHHHHH--HSGGGTTCCSCEEEESTTC
T ss_pred             HHHHHHHHH--hCchhcCCcCceEEeCCCC
Confidence            999999999  9999999999999999997

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-46  Score=305.11  Aligned_cols=213  Identities=26%  Similarity=0.431  Sum_probs=183.1

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+||+++||||++|||+++++.|+++|++|++++|+++.++++.++   ..+....+|+.+.+.++..    .+.++++|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~---~~~~~~~~d~~~~~~~~~~----~~~~~~id   76 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKY---PGIQTRVLDVTKKKQIDQF----ANEVERLD   76 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGS---TTEEEEECCTTCHHHHHHH----HHHCSCCS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc---cCCceeeeecccccccccc----ccccccce
Confidence            7999999999999999999999999999999999998777665543   3577888899887665544    44568999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||....   .++.+.+.++|++.+++|+.++++++|.++|.|.+++.|+|+++||..+..   .+.+   +...|
T Consensus        77 ~lVn~ag~~~~---~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~---~~~~---~~~~Y  147 (245)
T d2ag5a1          77 VLFNVAGFVHH---GTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSV---KGVV---NRCVY  147 (245)
T ss_dssp             EEEECCCCCCC---BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTT---BCCT---TBHHH
T ss_pred             eEEecccccCC---CChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhcc---CCcc---chhHH
Confidence            99999876642   567888999999999999999999999999999999999999999553321   1122   22679


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------H---h--HHhhhhhhhhhhc
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------E---A--IASIANAALYNMA  235 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~---~--~~~~~~~~~~l~~  235 (255)
                      +++|+|+++|+|.||.|++++|||||+|+| |.++|+                       +   +  |+|+++++.||  
T Consensus       148 ~~sKaal~~l~r~lA~e~~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL--  224 (245)
T d2ag5a1         148 STTKAAVIGLTKSVAADFIQQGIRCNCVCP-GTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYL--  224 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEee-ceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH--
Confidence            999999999999999999999999999999 888775                       1   2  89999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +++++.|+|||+|.|||||+
T Consensus       225 ~s~~s~~iTG~~i~VDGG~s  244 (245)
T d2ag5a1         225 ASDESAYVTGNPVIIDGGWS  244 (245)
T ss_dssp             HSGGGTTCCSCEEEECTTGG
T ss_pred             hChhhCCCcCceEEeCCCcC
Confidence            99999999999999999985

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-45  Score=300.78  Aligned_cols=220  Identities=21%  Similarity=0.315  Sum_probs=189.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++||+++||||++|||+++|+.|+++|++|++++|+++.++++.+++.    ..++.+++||++++++++++++++.++
T Consensus         7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~   86 (257)
T d1xg5a_           7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ   86 (257)
T ss_dssp             GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence            3899999999999999999999999999999999999988888777664    247889999999999999999999999


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCcccccccCcC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +|+||+|||||+...   ..++.+.+.++|++.+++|+.+++++++.++|.|++++  +|+||++||..+....  +...
T Consensus        87 ~g~iD~lVnnAg~~~---~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~--p~~~  161 (257)
T d1xg5a_          87 HSGVDICINNAGLAR---PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVL--PLSV  161 (257)
T ss_dssp             HCCCSEEEECCCCCC---CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCC--SCGG
T ss_pred             cCCCCEEEecccccC---CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCC--CCcc
Confidence            999999999987654   36788999999999999999999999999999987654  6899999965432111  1122


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHh--cccCcEEeEeccCcchhhh--------------------Hh--HHhhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAEL--GRYGIRVDCVSHTYGLAMA--------------------EA--IASIANAALY  232 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~--~~~gi~v~~v~p~~~~~t~--------------------~~--~~~~~~~~~~  232 (255)
                      .   ..|++||+|+.+++++|+.|+  +++|||||+|+| +.++|+                    ++  |||++++++|
T Consensus       162 ~---~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~P-G~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~f  237 (257)
T d1xg5a_         162 T---HFYSATKYAVTALTEGLRQELREAQTHIRATCISP-GVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDVAEAVIY  237 (257)
T ss_dssp             G---HHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEE-SCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHHHHHHHH
T ss_pred             c---HHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeC-CCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            2   559999999999999999998  788999999999 777775                    12  9999999999


Q ss_pred             hhccCCCCCeeeceeEEecCC
Q 025252          233 NMAKDDDTSYVGKQNLLVNGG  253 (255)
Q Consensus       233 l~~~~~~~~~~~G~~i~~dgG  253 (255)
                      |  +++++.++|||++.-++|
T Consensus       238 L--~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         238 V--LSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             H--HHSCTTEEEEEEEEEETT
T ss_pred             H--hCChhcCeECCEEEEeCC
Confidence            9  999999999997555554

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=4.3e-44  Score=301.10  Aligned_cols=221  Identities=24%  Similarity=0.340  Sum_probs=188.8

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      ..+++||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.   ..++.++.+|+++.++++++++.+.+
T Consensus        20 ~~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~   99 (294)
T d1w6ua_          20 PNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIK   99 (294)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhh
Confidence            368999999999999999999999999999999999999887776665543   25788999999999999999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEeccCCCcccccccCcC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTTGTGTTACTEIEGLC  176 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is~~~~~~~~~~~~~~  176 (255)
                      +++++|++||||+...   ..++.+.+.+++++++.+|+.+.+.+.+.+.+.+.. +..+.++++++    .....+.+.
T Consensus       100 ~~g~iDilvnnAg~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss----~~~~~~~~~  172 (294)
T d1w6ua_         100 VAGHPNIVINNAAGNF---ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITT----IYAETGSGF  172 (294)
T ss_dssp             HTCSCSEEEECCCCCC---CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECC----THHHHCCTT
T ss_pred             hccccchhhhhhhhcc---ccccccchhhhhhhheeeecccchhhhhhhhccccccccccccccccc----chhhhcccc
Confidence            9999999999987654   356678899999999999999999998887766654 44566677763    333333333


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------Hh--HHhhhhhhh
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------EA--IASIANAAL  231 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------~~--~~~~~~~~~  231 (255)
                      .   .+|++||+|+++|+|.+|.|++++|||||+|+| |.++|+                       ++  |+|++.++.
T Consensus       173 ~---~~YsasKaal~~ltk~lA~ela~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~  248 (294)
T d1w6ua_         173 V---VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQP-GPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAA  248 (294)
T ss_dssp             C---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred             c---chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEcc-CccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHH
Confidence            3   669999999999999999999999999999999 888775                       12  999999999


Q ss_pred             hhhccCCCCCeeeceeEEecCCc
Q 025252          232 YNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       232 ~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      ||  +|+.+.|+|||+|.||||+
T Consensus       249 fL--~sd~s~~itG~~i~vDGG~  269 (294)
T d1w6ua_         249 FL--CSDYASWINGAVIKFDGGE  269 (294)
T ss_dssp             HH--TSGGGTTCCSCEEEESTTH
T ss_pred             HH--hCchhcCCCCcEEEECCCh
Confidence            99  9999999999999999995

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.9e-42  Score=285.87  Aligned_cols=215  Identities=16%  Similarity=0.141  Sum_probs=184.4

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHH---cCCEEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~---~g~~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      .|.||+++||||++|||+++|++|++   +|++|++++|+++.++++.+++.    ..++.++.||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999986   79999999999998888777653    347899999999999999999998


Q ss_pred             HHH----cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC--CCcEEEeccCCCccc
Q 025252           96 VAK----FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR--RGCILYTTGTGTTAC  169 (255)
Q Consensus        96 ~~~----~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~--~~~ii~is~~~~~~~  169 (255)
                      .+.    ++.+|++||||+........++.+.+.++|++++++|+.++++++|.++|+|++++  .|+|+++||    ..
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS----~~  158 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISS----LC  158 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECC----GG
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCccccccccc----cc
Confidence            763    35789999998876655556788999999999999999999999999999998765  579999994    44


Q ss_pred             ccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------Hh--
Q 025252          170 TEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------EA--  222 (255)
Q Consensus       170 ~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------~~--  222 (255)
                      +..+.++.   ..|++||+|+++|+++|+.|  .+|||||+|+| |.++|+                         ++  
T Consensus       159 ~~~~~~~~---~~Y~asKaal~~lt~~la~e--~~gIrVn~v~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~  232 (259)
T d1oaaa_         159 ALQPYKGW---GLYCAGKAARDMLYQVLAAE--EPSVRVLSYAP-GPLDNDMQQLARETSKDPELRSKLQKLKSDGALVD  232 (259)
T ss_dssp             GTSCCTTC---HHHHHHHHHHHHHHHHHHHH--CTTEEEEEEEC-CSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBC
T ss_pred             ccCCCccc---hHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEc-CCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCC
Confidence            44444444   77999999999999999999  57999999999 888775                         11  


Q ss_pred             HHhhhhhhhhhhccCCCCCeeeceeEEe
Q 025252          223 IASIANAALYNMAKDDDTSYVGKQNLLV  250 (255)
Q Consensus       223 ~~~~~~~~~~l~~~~~~~~~~~G~~i~~  250 (255)
                      |+|+++.++++  +++ ++|+||++|.|
T Consensus       233 p~evA~~i~~l--l~~-~s~~TG~~idv  257 (259)
T d1oaaa_         233 CGTSAQKLLGL--LQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHHHHHH--HHH-CCSCTTEEEET
T ss_pred             HHHHHHHHHHH--hhh-ccCCCCCeEEe
Confidence            89999999999  665 46999999876

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=2.7e-42  Score=283.88  Aligned_cols=209  Identities=17%  Similarity=0.119  Sum_probs=176.2

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHhCCCceEEEEeeCC-CHHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKLGHQDVCYIHCDVS-NEREVINLVDTTVA   97 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   97 (255)
                      |+++||+++||||++|||+++|++|+++|++|++++|+.+..+++.   ......++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999999988766544433   3334457899999998 67889999999999


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC---CCCcEEEeccCCCcccccccC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR---RRGCILYTTGTGTTACTEIEG  174 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~---~~~~ii~is~~~~~~~~~~~~  174 (255)
                      .+|+||+||||||..           +.+.|++++++|+.+++++++.++|.|.++   +.|+||++|    +..+..+.
T Consensus        81 ~~g~iDilvnnAG~~-----------~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~is----S~~~~~~~  145 (254)
T d1sbya1          81 QLKTVDILINGAGIL-----------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC----SVTGFNAI  145 (254)
T ss_dssp             HHSCCCEEEECCCCC-----------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEEC----CGGGTSCC
T ss_pred             HcCCCCEEEeCCCCC-----------CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEe----chhhccCC
Confidence            999999999998742           457899999999999999999999999765   358899999    44444444


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh------------------H----h--HHhhhhhh
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA------------------E----A--IASIANAA  230 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~------------------~----~--~~~~~~~~  230 (255)
                      +..   ..|++||+|+.+|+++|+.|++++|||||+|+| |+++|+                  +    .  ||++++.+
T Consensus       146 ~~~---~~Y~asKaal~~~t~~la~el~~~gIrVn~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~  221 (254)
T d1sbya1         146 HQV---PVYSASKAAVVSFTNSLAKLAPITGVTAYSINP-GITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF  221 (254)
T ss_dssp             TTS---HHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEE-CSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred             CCC---HHHHHHHHHHHHHHHHHHhhccccCeEEEEEEe-CCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHH
Confidence            444   679999999999999999999999999999999 888876                  1    1  88888888


Q ss_pred             hhhhccCCCCCeeeceeEEecCCc
Q 025252          231 LYNMAKDDDTSYVGKQNLLVNGGF  254 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~dgG~  254 (255)
                      +++  .+   ...||+++.+|||+
T Consensus       222 ~~~--~~---~~~tG~vi~vdgG~  240 (254)
T d1sbya1         222 VKA--IE---ANKNGAIWKLDLGT  240 (254)
T ss_dssp             HHH--HH---HCCTTCEEEEETTE
T ss_pred             HHh--hh---CCCCCCEEEECCCE
Confidence            776  43   23599999999994

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-42  Score=282.89  Aligned_cols=213  Identities=22%  Similarity=0.321  Sum_probs=181.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.||+++||||++|||+++|++|+++|++|++++|++++++++.+++.  ..++.++.||++|+++++++++++.+.+|
T Consensus         4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g   83 (244)
T d1yb1a_           4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIG   83 (244)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999999999998888877764  25788999999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      ++|++|||||....   .++.+.+.++|++++++|+.+++++++.++|.|++++.|+||++||..    +..+.++.   
T Consensus        84 ~idilinnag~~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~----~~~~~~~~---  153 (244)
T d1yb1a_          84 DVSILVNNAGVVYT---SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAA----GHVSVPFL---  153 (244)
T ss_dssp             CCSEEEECCCCCCC---CCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-----CCCHHHH---
T ss_pred             CCceeEeecccccc---ccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecch----hcCCCCCc---
Confidence            99999999876653   566778999999999999999999999999999999999999999554    33344444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcc---cCcEEeEeccCcchhhh-------Hh-----HHhhhhhhhhhhccCCCCCeeec
Q 025252          181 NYYGVSKFGILGLVKSLAAELGR---YGIRVDCVSHTYGLAMA-------EA-----IASIANAALYNMAKDDDTSYVGK  245 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~---~gi~v~~v~p~~~~~t~-------~~-----~~~~~~~~~~l~~~~~~~~~~~G  245 (255)
                      ..|++||+|+.+|+++|+.|+++   +||+||+|+| |.++|+       ++     ||++++.+...+...+...++.+
T Consensus       154 ~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~P-G~v~T~~~~~~~~~~~~~~~pe~va~~i~~~~~~~~~~i~~p~  232 (244)
T d1yb1a_         154 LAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCP-NFVNTGFIKNPSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPS  232 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEE-THHHHCSTTCTHHHHCCCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEc-CCCCChhhhCcCccccCCCCHHHHHHHHHHHHhcCCcEEEehH
Confidence            67999999999999999999876   5799999999 888886       11     89999988766433333333444


Q ss_pred             e
Q 025252          246 Q  246 (255)
Q Consensus       246 ~  246 (255)
                      +
T Consensus       233 ~  233 (244)
T d1yb1a_         233 S  233 (244)
T ss_dssp             C
T ss_pred             H
Confidence            3

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.2e-40  Score=278.36  Aligned_cols=216  Identities=22%  Similarity=0.292  Sum_probs=168.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc-chHHHHHHHhC---CCceEE-----------------EEeeCCCH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD-NLGQALADKLG---HQDVCY-----------------IHCDVSNE   85 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~-~~~~~~~~~~~---~~~~~~-----------------~~~D~~~~   85 (255)
                      .++|||||++|||+++|++|+++|++|++++++. +..+++.+++.   ......                 +.+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            3689999999999999999999999999987764 44444444432   233333                 45669999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHH--------------HHHHHhhhhhhHHHHHHHHHHHh-
Q 025252           86 REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSD--------------LERLLAVNTIGGFLVAKHAARVM-  150 (255)
Q Consensus        86 ~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~--------------~~~~~~~n~~~~~~l~~~~~~~l-  150 (255)
                      ++++++++++.+++|+||+||||||....   .++.+.+.++              +..++.+|+.+++++++.+.+.+ 
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~  159 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYP---TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA  159 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCC---CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCC---CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhh
Confidence            99999999999999999999999876543   3344444444              34579999999999999988764 


Q ss_pred             -----cCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----
Q 025252          151 -----VPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----  220 (255)
Q Consensus       151 -----~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----  220 (255)
                           .+.+.++|+++++.    ....+.++.   .+|++||+|+++|++.||.|++++|||||+|+| |.+.+.     
T Consensus       160 ~~~~~~~~~~~~ii~~~s~----~~~~~~~~~---~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~P-G~t~~~~~~~~  231 (284)
T d1e7wa_         160 GTPAKHRGTNYSIINMVDA----MTNQPLLGY---TIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-GLSVLVDDMPP  231 (284)
T ss_dssp             TSCGGGSCSCEEEEEECCT----TTTSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBCCGGGSCH
T ss_pred             hhHHHhcCCCCcccccccc----cccCCccce---eeeccccccchhhhHHHHHHhCCcccccccccc-ccccccccCCH
Confidence                 33456778888733    333333333   679999999999999999999999999999999 544332     


Q ss_pred             --------------Hh--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 --------------EA--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 --------------~~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                    ++  |+|+++++.||  +|++++|+|||+|.|||||+
T Consensus       232 ~~~~~~~~~~pl~~R~~~peeiA~~v~fL--~S~~s~~itG~~i~VDGG~s  280 (284)
T d1e7wa_         232 AVWEGHRSKVPLYQRDSSAAEVSDVVIFL--CSSKAKYITGTCVKVDGGYS  280 (284)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHHHH--hCchhcCccCCeEEECcChh
Confidence                          22  99999999999  99999999999999999984

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-40  Score=272.02  Aligned_cols=215  Identities=28%  Similarity=0.396  Sum_probs=185.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++||+++||||++|||++++++|+++|++|++++|+++.+++..+++. .+.....+|+.+.+++++..+++...++.+
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-NNCVFAPADVTSEKDVQTALALAKGKFGRV   80 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-CCcccccccccccccccccccccccccccc
Confidence            4899999999999999999999999999999999999999999888886 578889999999999999999999988999


Q ss_pred             cEEEEcCCCccc---cCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC------CCCcEEEeccCCCccccccc
Q 025252          103 DILVNSGCNLEY---RGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR------RRGCILYTTGTGTTACTEIE  173 (255)
Q Consensus       103 d~li~~a~~~~~---~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~------~~~~ii~is~~~~~~~~~~~  173 (255)
                      |.+++|++....   ....+..+.+.++|++++++|+.++++++++++|+|..+      ++|+||++||.    .+..+
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~----~~~~~  156 (248)
T d2o23a1          81 DVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASV----AAFEG  156 (248)
T ss_dssp             CEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCT----HHHHC
T ss_pred             cccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecch----hhccC
Confidence            999988543322   222455677899999999999999999999999997644      56899999944    44444


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhh
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAA  230 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~  230 (255)
                      .++.   ..|++||+|+++|++.||.|++++|||||+|+| |.++|+                     |+  |||+++++
T Consensus       157 ~~~~---~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~P-G~i~T~~~~~~~~~~~~~~~~~~pl~~R~g~peevA~~v  232 (248)
T d2o23a1         157 QVGQ---AAYSASKGGIVGMTLPIARDLAPIGIRVMTIAP-GLFGTPLLTSLPEKVCNFLASQVPFPSRLGDPAEYAHLV  232 (248)
T ss_dssp             CTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCCC----------CHHHHTCSSSCSCBCHHHHHHHH
T ss_pred             CCCc---hHHHHHHHHHHHHHHHHHHHhcccCcceeeecc-CceecchhhcCCHHHHHHHHhcCCCCCCCcCHHHHHHHH
Confidence            4444   779999999999999999999999999999999 877776                     12  89999999


Q ss_pred             hhhhccCCCCCeeeceeEEe
Q 025252          231 LYNMAKDDDTSYVGKQNLLV  250 (255)
Q Consensus       231 ~~l~~~~~~~~~~~G~~i~~  250 (255)
                      .||  ++  ++|+|||+|.|
T Consensus       233 ~fL--~s--~~~itGq~I~v  248 (248)
T d2o23a1         233 QAI--IE--NPFLNGEVIRL  248 (248)
T ss_dssp             HHH--HH--CTTCCSCEEEE
T ss_pred             HHH--Hh--CCCCCceEeEC
Confidence            999  65  57999999986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=8e-41  Score=275.88  Aligned_cols=220  Identities=20%  Similarity=0.254  Sum_probs=184.3

Q ss_pred             ecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |+||+++||||++  |||+++|+.|+++|++|++++|+++..+.+.+... ..+...+.+|+++..++++.++++.+.++
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            6899999999998  89999999999999999999999776555543332 24678889999999999999999999999


Q ss_pred             CccEEEEcCCCccccCc--cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          101 KLDILVNSGCNLEYRGF--VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      ++|++|||++.......  ........+.|...+++|+.+.+.+++.+.|.++  +++.|+++||.+    ...+.+.. 
T Consensus        83 ~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Ii~iss~~----~~~~~~~~-  155 (258)
T d1qsga_          83 KFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN--PGSALLTLSYLG----AERAIPNY-  155 (258)
T ss_dssp             SEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEECGG----GTSBCTTT-
T ss_pred             ccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcc--CCcEEEEecchh----hccCCCCc-
Confidence            99999999765543221  1223457778999999999999999999999984  356788888443    33333333 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~  234 (255)
                        ..|++||+|+++|++.+|.||+++|||||+|+| |.++|+                      ++  |||++..+.|| 
T Consensus       156 --~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL-  231 (258)
T d1qsga_         156 --NVMGLAKASLEANVRYMANAMGPEGVRVNAISA-GPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFL-  231 (258)
T ss_dssp             --THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEE-CCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH-
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhCccCceeecccc-cccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHH-
Confidence              679999999999999999999999999999999 888776                      12  99999999999 


Q ss_pred             ccCCCCCeeeceeEEecCCcC
Q 025252          235 AKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       235 ~~~~~~~~~~G~~i~~dgG~~  255 (255)
                       +|+.+.|+|||+|.|||||+
T Consensus       232 -~s~~s~~itG~~i~vDGG~~  251 (258)
T d1qsga_         232 -CSDLSAGISGEVVHVDGGFS  251 (258)
T ss_dssp             -TSGGGTTCCSCEEEESTTGG
T ss_pred             -hCchhcCccCceEEECcCHH
Confidence             99999999999999999984

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=2.2e-40  Score=272.14  Aligned_cols=223  Identities=15%  Similarity=0.159  Sum_probs=179.9

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      |.+|+||||||++|||+++|++|+++|+  +|++.+|+++.++++.+.. ..++.++.+|+++.++++++++++.+.++.
T Consensus         1 M~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~-~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           1 MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CcCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhh-CCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            5679999999999999999999999995  7888999999888876543 368999999999999999999999988764


Q ss_pred             --ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-----------CCcEEEeccCCCcc
Q 025252          102 --LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-----------RGCILYTTGTGTTA  168 (255)
Q Consensus       102 --id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-----------~~~ii~is~~~~~~  168 (255)
                        +|+||||||....  ..++.+.+.++|++++++|+.+++++++.++|+|++++           .++++++++.....
T Consensus        80 ~~idilinnAG~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~  157 (250)
T d1yo6a1          80 DGLSLLINNAGVLLS--YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI  157 (250)
T ss_dssp             GCCCEEEECCCCCCC--BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred             CCeEEEEEcCcccCC--CCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccc
Confidence              9999999986542  24567889999999999999999999999999997542           36788887543333


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h-HHhhhhhhhhhhccCCCCC
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A-IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~-~~~~~~~~~~l~~~~~~~~  241 (255)
                      ..........+..+|++||+|+.+|++.|+.|++++||+||+|+| |.++|+.      + ||+.+..++..  +.+...
T Consensus       158 ~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~P-G~v~T~m~~~~~~~~~e~~a~~~~~~--~~~~~~  234 (250)
T d1yo6a1         158 TDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCP-GWVQTNLGGKNAALTVEQSTAELISS--FNKLDN  234 (250)
T ss_dssp             TTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEC-CCC-------------HHHHHHHHHH--HTTCCG
T ss_pred             cCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEec-CCCCCCCCCCCCCCCHHHHHHHHHHH--HhcCCC
Confidence            333333333344679999999999999999999999999999999 8898872      1 78888888877  555566


Q ss_pred             eeeceeEEecC
Q 025252          242 YVGKQNLLVNG  252 (255)
Q Consensus       242 ~~~G~~i~~dg  252 (255)
                      ..+|+++..||
T Consensus       235 ~~sG~f~~~~g  245 (250)
T d1yo6a1         235 SHNGRFFMRNL  245 (250)
T ss_dssp             GGTTCEEETTE
T ss_pred             CCCeEEECCCC
Confidence            68899887775

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=2.2e-40  Score=271.82  Aligned_cols=220  Identities=16%  Similarity=0.120  Sum_probs=175.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHH---HcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHH--Hc
Q 025252           26 GRVAIITGGASGIGASAAQLFH---KNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVA--KF   99 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~---~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~--~~   99 (255)
                      .|++|||||++|||+++|++|+   ++|++|++++|+++.++++.+... ..++.++.||++|+++++++++++.+  .+
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            4789999999999999999996   479999999999988777654332 35899999999999999999999854  57


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-----------CCCcEEEeccCCCcc
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-----------RRGCILYTTGTGTTA  168 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----------~~~~ii~is~~~~~~  168 (255)
                      +++|+||||||.....  ..+.+.+.++|++++++|+.+++++++.++|+|+++           +.|++|+++|..   
T Consensus        82 ~~iDiLvnNAg~~~~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~---  156 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS--ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSIL---  156 (248)
T ss_dssp             GCCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGG---
T ss_pred             CCcceEEeeccccccC--cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccc---
Confidence            8999999998865432  456678999999999999999999999999999753           468999999543   


Q ss_pred             cccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhhH------h-HHhhhhhhhhhhccCCCCC
Q 025252          169 CTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMAE------A-IASIANAALYNMAKDDDTS  241 (255)
Q Consensus       169 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~~------~-~~~~~~~~~~l~~~~~~~~  241 (255)
                       +............|++||+|+++|++.++.|++++|||||+|+| |.++|+.      + +++.+..++..  +.....
T Consensus       157 -g~~~~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~P-G~v~T~m~~~~~~~~~~~~~~~i~~~--i~~l~~  232 (248)
T d1snya_         157 -GSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHP-GWVKTDMGGSSAPLDVPTSTGQIVQT--ISKLGE  232 (248)
T ss_dssp             -GCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECC-CSBCSTTTCTTCSBCHHHHHHHHHHH--HHHCCG
T ss_pred             -cccCCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC-CcccCCcccccCCCCchHHHHHHHHH--HHhcCc
Confidence             33222222223579999999999999999999999999999999 8999872      2 33333333333  222344


Q ss_pred             eeeceeEEecCCc
Q 025252          242 YVGKQNLLVNGGF  254 (255)
Q Consensus       242 ~~~G~~i~~dgG~  254 (255)
                      ..||+++.+||+.
T Consensus       233 ~~tG~~i~~dG~~  245 (248)
T d1snya_         233 KQNGGFVNYDGTP  245 (248)
T ss_dssp             GGTTCEECTTSCB
T ss_pred             cCCCcEEEECCeE
Confidence            5689999999963

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=9.3e-40  Score=266.59  Aligned_cols=208  Identities=26%  Similarity=0.339  Sum_probs=171.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +|++|||||++|||+++|++|+++|++|++++|+++.          .+....++|+++.....++.++..+.....+.+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~   70 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVV   70 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc----------ccceEeeccccchhhhHHHHHhhhccccccchh
Confidence            5899999999999999999999999999999998753          356778999999999999988887765444444


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHH------hcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARV------MVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~------l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      .+++..............+.+.|++++++|+.+++.+++.+.+.      |.+++.|+||++||    ..+..+.++.  
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS----~~~~~~~~~~--  144 (241)
T d1uaya_          71 SAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTAS----VAAFEGQIGQ--  144 (241)
T ss_dssp             ECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECC----THHHHCCTTC--
T ss_pred             hhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecc----hhhccCCCCc--
Confidence            44332222222344556788999999999999999999999998      45556799999994    4444444444  


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------------Hh--HHhhhhhhhhhhcc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------------EA--IASIANAALYNMAK  236 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------------~~--~~~~~~~~~~l~~~  236 (255)
                       ..|++||+|+++|+|+||.|++++|||||+|+| |.++|+                     ++  |||++.++.||  +
T Consensus       145 -~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~P-G~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~pedvA~~v~fL--~  220 (241)
T d1uaya_         145 -AAYAASKGGVVALTLPAARELAGWGIRVVTVAP-GLFDTPLLQGLPEKAKASLAAQVPFPPRLGRPEEYAALVLHI--L  220 (241)
T ss_dssp             -HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCHHHHHHHHHHH--H
T ss_pred             -hhhHHHHHHHHHHHHHHHHHHhhcCCceeeecC-CcccccccchhhhhHHHHHHhcCCCCCCCcCHHHHHHHHHHH--H
Confidence             779999999999999999999999999999999 888876                     12  99999999999  7


Q ss_pred             CCCCCeeeceeEEecCCcC
Q 025252          237 DDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       237 ~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  ++|+|||+|.|||||+
T Consensus       221 s--~~~iTG~~i~VDGG~~  237 (241)
T d1uaya_         221 E--NPMLNGEVVRLDGALR  237 (241)
T ss_dssp             H--CTTCCSCEEEESTTCC
T ss_pred             h--CCCCCCCEEEECCccc
Confidence            6  4699999999999985

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4e-40  Score=280.75  Aligned_cols=218  Identities=17%  Similarity=0.224  Sum_probs=176.4

Q ss_pred             cCeEEEEec--CCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--------------CceEEE----------
Q 025252           25 QGRVAIITG--GASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--------------QDVCYI----------   78 (255)
Q Consensus        25 ~~k~~lVtG--as~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~----------   78 (255)
                      ++|++||||  +++|||+++|++|+++|++|+++++..............              ......          
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  668999999999999999999999876654433322110              011122          


Q ss_pred             ----------EeeCCCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHH
Q 025252           79 ----------HCDVSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAAR  148 (255)
Q Consensus        79 ----------~~D~~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~  148 (255)
                                .+|+++.++++++++++.+.+|+||++|||++..+.. ..++.+.+.++|++++++|+++++.++|+++|
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~  159 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEV-QKDLLNTSRKGYLDALSKSSYSLISLCKYFVN  159 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTT-TSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeecccccccccc-CCChhhhhhhhhhhhcccchhHHHHHHHHHHh
Confidence                      2367788889999999999999999999998765432 25678889999999999999999999999999


Q ss_pred             HhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcc-cCcEEeEeccCcchhhh-------
Q 025252          149 VMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGR-YGIRVDCVSHTYGLAMA-------  220 (255)
Q Consensus       149 ~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~-~gi~v~~v~p~~~~~t~-------  220 (255)
                      +|++  .|+||++||.+    .....+++  ...|++||+|+++|+|.||.||++ +|||||+|+| |.++|+       
T Consensus       160 ~m~~--~GsIv~iss~~----~~~~~p~y--~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~P-G~i~T~a~~~i~g  230 (329)
T d1uh5a_         160 IMKP--QSSIISLTYHA----SQKVVPGY--GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISA-GPLKSRAATAINK  230 (329)
T ss_dssp             GEEE--EEEEEEEECGG----GTSCCTTC--TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCCCCTTGGGCC-
T ss_pred             hccc--ccccccceeeh----hccccccc--chhhhhhhccccccchhhHHHHhcccCcEEEEEec-Ccccchhhhcccc
Confidence            9953  58999998443    33332221  245999999999999999999986 6999999999 888770       


Q ss_pred             -------------------------------------------------------H---h--HHhhhhhhhhhhccCCCC
Q 025252          221 -------------------------------------------------------E---A--IASIANAALYNMAKDDDT  240 (255)
Q Consensus       221 -------------------------------------------------------~---~--~~~~~~~~~~l~~~~~~~  240 (255)
                                                                             |   +  |||++.+++||  +|+.+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fL--aSd~s  308 (329)
T d1uh5a_         231 LNNTYENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFL--LSRES  308 (329)
T ss_dssp             -----------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHH--HSGGG
T ss_pred             hhhhhhhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHH--hCchh
Confidence                                                                   1   2  99999999999  99999


Q ss_pred             CeeeceeEEecCCc
Q 025252          241 SYVGKQNLLVNGGF  254 (255)
Q Consensus       241 ~~~~G~~i~~dgG~  254 (255)
                      +|+|||+|.||||+
T Consensus       309 ~~iTGq~i~VDGG~  322 (329)
T d1uh5a_         309 RAITGQTIYVDNGL  322 (329)
T ss_dssp             TTCCSCEEEESTTG
T ss_pred             CCccCCeEEECCCc
Confidence            99999999999997

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-40  Score=272.06  Aligned_cols=219  Identities=21%  Similarity=0.215  Sum_probs=181.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHc-CCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKN-GAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~-g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      +++|||||++|||+++|++|+++ |++|++++|+++++++..++++  ..++.+++||++|.++++++++++.+++|+||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            46799999999999999999986 8999999999999888887764  35788999999999999999999999999999


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc-------------
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT-------------  170 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~-------------  170 (255)
                      +||||||....   ....+.+.++|++++++|+.+++++++.++|.|++  .|+||++||..+....             
T Consensus        84 iLVnNAGi~~~---~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          84 VLVNNAGIAFK---VADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP--QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             EEEECCCCCCC---TTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE--EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             EEEEcCCcCCC---CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcccccccceeccccccchhhhhhhcc
Confidence            99999987542   45566788899999999999999999999999964  4899999965321110             


Q ss_pred             ---------------------cccCcCCCCCcccccchHHHHHHHHHHHHHhcc----cCcEEeEeccCcchhhhHh---
Q 025252          171 ---------------------EIEGLCNIPANYYGVSKFGILGLVKSLAAELGR----YGIRVDCVSHTYGLAMAEA---  222 (255)
Q Consensus       171 ---------------------~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~----~gi~v~~v~p~~~~~t~~~---  222 (255)
                                           ........|...|++||+++.++++.+++|+++    .||+||+|+| |.++|+..   
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~P-G~v~T~m~~~~  237 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCP-GWVRTDMAGPK  237 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEEC-CSBCSTTTCTT
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEec-ccccCCcccCc
Confidence                                 001112234467999999999999999999876    4899999999 88888721   


Q ss_pred             ----HHhhhhhhhhhhccCCCCCeeeceeEEecC
Q 025252          223 ----IASIANAALYNMAKDDDTSYVGKQNLLVNG  252 (255)
Q Consensus       223 ----~~~~~~~~~~l~~~~~~~~~~~G~~i~~dg  252 (255)
                          |||.++.++++...+++..+++|+++. |.
T Consensus       238 ~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~  270 (275)
T d1wmaa1         238 ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EK  270 (275)
T ss_dssp             CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TT
T ss_pred             ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CC
Confidence                999999999984446777889999775 43

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=1e-39  Score=274.38  Aligned_cols=223  Identities=21%  Similarity=0.211  Sum_probs=173.5

Q ss_pred             eeeecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-------------Cce-EEEEee---
Q 025252           21 YYRLQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-------------QDV-CYIHCD---   81 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-------------~~~-~~~~~D---   81 (255)
                      +++|+||++|||||++  |||+++|++|+++|++|++++|++............             ... ....+|   
T Consensus         3 ~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T d1d7oa_           3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhc
Confidence            3789999999999875  999999999999999999999876543322211110             011 122333   


Q ss_pred             -----------------CCCHHHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHH
Q 025252           82 -----------------VSNEREVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAK  144 (255)
Q Consensus        82 -----------------~~~~~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  144 (255)
                                       .++.++++++++++.+++|+||+|||||+..... ..++.+.+.++|++++++|+.+++++++
T Consensus        83 ~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEV-SKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTT-TSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             cccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCccccccccccccc-ccchhhhhcccccccccchhhhhhhhhh
Confidence                             3455667889999999999999999998764321 2567889999999999999999999999


Q ss_pred             HHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcccccchHHHHHHHHHHHHHhc-ccCcEEeEeccCcchhhh---
Q 025252          145 HAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELG-RYGIRVDCVSHTYGLAMA---  220 (255)
Q Consensus       145 ~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~-~~gi~v~~v~p~~~~~t~---  220 (255)
                      +++|.+.++  +.++++++.+...   ...+.   ...|+++|+++..+++.++.|+. ++|||||+|+| |.++|+   
T Consensus       162 ~~~~~~~~~--g~~~~~~~~~~~~---~~~~~---~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~P-G~i~T~~~~  232 (297)
T d1d7oa_         162 HFLPIMNPG--GASISLTYIASER---IIPGY---GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISA-GPLGSRAAK  232 (297)
T ss_dssp             HHGGGEEEE--EEEEEEECGGGTS---CCTTC---TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEE-CCCBCCCSS
T ss_pred             HHHHHhhcC--Ccceeeeehhhcc---ccccc---ccceecccccccccccccchhccccceEEeccccc-ccccchhhh
Confidence            999988654  4555555322111   11111   25699999999999999999996 68999999999 877775   


Q ss_pred             ----------------H---h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          221 ----------------E---A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       221 ----------------~---~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                                      |   +  |||++.+++||  +|+.+.|+|||+|.||||++
T Consensus       233 ~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~fL--~S~~a~~itGq~i~vDGG~s  286 (297)
T d1d7oa_         233 AIGFIDTMIEYSYNNAPIQKTLTADEVGNAAAFL--VSPLASAITGATIYVDNGLN  286 (297)
T ss_dssp             CCSHHHHHHHHHHHHSSSCCCBCHHHHHHHHHHH--TSGGGTTCCSCEEEESTTGG
T ss_pred             hccCCHHHHHHHHhCCCCCCCCCHHHHHHHHHHH--hCchhcCCcCceEEECcCHh
Confidence                            1   2  99999999999  99999999999999999974

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=269.77  Aligned_cols=210  Identities=21%  Similarity=0.223  Sum_probs=171.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEE---ecCcch---HHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIA---DVQDNL---GQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~---~r~~~~---~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .|++|||||++|||+++|++|+++|++|+.+   .|+.+.   +.+..+++.  ..++.++.||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            5889999999999999999999999875544   555443   333334433  35799999999999999999988743


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                        |.+|++||||+...   ..++.+.+.++|++++++|+.++++++++++|+|++++.|+||++||    ..+..+.+..
T Consensus        82 --g~idilvnnag~~~---~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS----~~g~~~~~~~  152 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL---LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGS----VGGLMGLPFN  152 (285)
T ss_dssp             --SCCSEEEECCCCCC---CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEE----GGGTSCCTTC
T ss_pred             --cchhhhhhcccccc---cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEec----hhhcCCCCCc
Confidence              79999999987654   35677889999999999999999999999999999888999999994    4444444444


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------------------------
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------------------------  220 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------------------------  220 (255)
                         ..|++||+|+++|+++|+.|++++|||||+|+| |.++|+                                     
T Consensus       153 ---~~Y~asKaal~~l~~~la~El~~~gIrVn~V~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (285)
T d1jtva_         153 ---DVYCASKFALEGLCESLAVLLLPFGVHLSLIEC-GPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE  228 (285)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-CCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ---hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEec-CCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcc
Confidence               679999999999999999999999999999999 877764                                     


Q ss_pred             Hh--HHhhhhhhhhhhcc-CCCCCeeeceeE
Q 025252          221 EA--IASIANAALYNMAK-DDDTSYVGKQNL  248 (255)
Q Consensus       221 ~~--~~~~~~~~~~l~~~-~~~~~~~~G~~i  248 (255)
                      ++  |||+|+++++++.. ++...|++|+.+
T Consensus       229 ~~~~PeeVA~~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         229 AAQNPEEVAEVFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HCBCHHHHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             cCCCHHHHHHHHHHHHhCCCCCeEEecHHHH
Confidence            01  89999999988432 234568888753

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.3e-38  Score=264.76  Aligned_cols=220  Identities=21%  Similarity=0.277  Sum_probs=167.7

Q ss_pred             ecCeEEEEecCCC--hHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGAS--GIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~--giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |+||++|||||+|  |||+++|++|+++|++|++++|+++..+++.+... .....++.+|+++.++++++++++.+.+|
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            6899999999765  99999999999999999999999764444332211 24567789999999999999999999999


Q ss_pred             CccEEEEcCCCccccC-ccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCC
Q 025252          101 KLDILVNSGCNLEYRG-FVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIP  179 (255)
Q Consensus       101 ~id~li~~a~~~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~  179 (255)
                      ++|++|||++...... .....+..++.+...+.++..+.....+...+..  +..+.|+++|+.+    .......   
T Consensus        83 ~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~~~----~~~~~~~---  153 (274)
T d2pd4a1          83 SLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLL--NNGASVLTLSYLG----STKYMAH---  153 (274)
T ss_dssp             CEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE--EEEEEEEEEECGG----GTSBCTT---
T ss_pred             CCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccc--ccCcceeeecccc----ccccccc---
Confidence            9999999976554321 2233344555555555555655555555555443  2334455555322    2222222   


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh----------------------Hh--HHhhhhhhhhhhc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA----------------------EA--IASIANAALYNMA  235 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~----------------------~~--~~~~~~~~~~l~~  235 (255)
                      ...|++||+|++++++.++.|++++|||||+|+| +.++|+                      ++  |+|++.++.||  
T Consensus       154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~P-G~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL--  230 (274)
T d2pd4a1         154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSA-GPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYL--  230 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHH--
T ss_pred             chhhhHHHHHHHHHHHhhHHHhcCcCceeccccc-CcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHH--
Confidence            2679999999999999999999999999999999 877764                      12  99999999999  


Q ss_pred             cCCCCCeeeceeEEecCCcC
Q 025252          236 KDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       236 ~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +|+.+.|+|||+|.|||||+
T Consensus       231 ~S~~s~~itG~~i~vDGG~~  250 (274)
T d2pd4a1         231 LSSLSSGVSGEVHFVDAGYH  250 (274)
T ss_dssp             HSGGGTTCCSCEEEESTTGG
T ss_pred             hChhhCCCcCceEEECCChh
Confidence            99999999999999999984

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=3.7e-38  Score=261.09  Aligned_cols=218  Identities=20%  Similarity=0.250  Sum_probs=177.1

Q ss_pred             ecCeEEEEecC--CChHHHHHHHHHHHcCCEEEEEecCcchHHH-HHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-
Q 025252           24 LQGRVAIITGG--ASGIGASAAQLFHKNGAKVVIADVQDNLGQA-LADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-   99 (255)
Q Consensus        24 ~~~k~~lVtGa--s~giG~aia~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   99 (255)
                      |+||+++||||  ++|||+++|++|+++|++|++++|+.++..+ +.++++ .+...++||++++++++++++.+.+.+ 
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~-~~~~~~~~dv~~~~~~~~~~~~v~~~~~   82 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAIG   82 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcC-CceeeEeeecccccccccccchhhhccc
Confidence            68999999994  5799999999999999999999999876644 444443 578889999999999999999997764 


Q ss_pred             --CCccEEEEcCCCcccc--CccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCc
Q 025252          100 --GKLDILVNSGCNLEYR--GFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGL  175 (255)
Q Consensus       100 --g~id~li~~a~~~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~  175 (255)
                        +.+|+++||++..+..  ...++.+.+.+++.+.+++|+.+.+...+.+.+.+.  +.+.++++| .+    .....+
T Consensus        83 ~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s-~~----~~~~~p  155 (268)
T d2h7ma1          83 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN--PGGSIVGMD-FD----PSRAMP  155 (268)
T ss_dssp             TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE--EEEEEEEEE-CC----CSSCCT
T ss_pred             cCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc--ccccccccc-cc----ccccCc
Confidence              6799999998755432  223556788999999999999999999999887763  233444433 21    112222


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------------------H----h
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------------------E----A  222 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------------------~----~  222 (255)
                      ..   ..|+++|+|+.++++.++.|++++|||||+|+| |.++|+                             |    +
T Consensus       156 ~~---~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~P-G~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~  231 (268)
T d2h7ma1         156 AY---NWMTVAKSALESVNRFVAREAGKYGVRSNLVAA-GPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNM  231 (268)
T ss_dssp             TT---HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEE-CCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCT
T ss_pred             cc---chhhccccchhhccccchhhhhccCCcceEEec-CCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCC
Confidence            22   679999999999999999999999999999999 777664                             1    3


Q ss_pred             --HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          223 --IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       223 --~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                        |+|+++++.||  +||.+.|+|||+|.||||+.
T Consensus       232 ~~p~dva~~v~fL--~Sd~a~~iTG~~i~vDGG~~  264 (268)
T d2h7ma1         232 KDATPVAKTVCAL--LSDWLPATTGDIIYADGGAH  264 (268)
T ss_dssp             TCCHHHHHHHHHH--HSSSCTTCCSEEEEESTTGG
T ss_pred             CCHHHHHHHHHHH--hCchhcCccCCEEEECcCcc
Confidence              99999999999  99999999999999999973

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=3e-37  Score=255.19  Aligned_cols=219  Identities=25%  Similarity=0.307  Sum_probs=169.3

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HHHHHHHh---CCCceEEEEeeCC----CHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQALADKL---GHQDVCYIHCDVS----NEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~~~~~~~---~~~~~~~~~~D~~----~~~~~~~~~~~~~~~   98 (255)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++   .......+.+|..    +.+.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            379999999999999999999999999999998654 34444444   2345666665554    467788888889999


Q ss_pred             cCCccEEEEcCCCccccCcc--------CCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-----CCCcEEEeccCC
Q 025252           99 FGKLDILVNSGCNLEYRGFV--------SILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-----RRGCILYTTGTG  165 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~--------~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~is~~~  165 (255)
                      +|++|++|||||........        ...+.....+...+..|..+.+...+...+.+...     ..+.+++++   
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  158 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLC---  158 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEEC---
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhh---
Confidence            99999999998865432211        11223455677888999999999998888877543     345566666   


Q ss_pred             CcccccccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------H----h--HH
Q 025252          166 TTACTEIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------E----A--IA  224 (255)
Q Consensus       166 ~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~----~--~~  224 (255)
                       +.......++.   ..|++||+|++++++.+|.|++++|||||+|+| |.++|+               +    +  ||
T Consensus       159 -~~~~~~~~~~~---~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~P-G~i~t~~~~~~~~~~~~~~~~pl~r~~~~pe  233 (266)
T d1mxha_         159 -DAMTDLPLPGF---CVYTMAKHALGGLTRAAALELAPRHIRVNAVAP-GLSLLPPAMPQETQEEYRRKVPLGQSEASAA  233 (266)
T ss_dssp             -CGGGGSCCTTC---HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE-SSBSCCSSSCHHHHHHHHTTCTTTSCCBCHH
T ss_pred             -hccccccCcch---hhhhhhHHHHhhhHHHHHHHhCccCcEEEEecc-CcEeccccCCHHHHHHHHhcCCCCCCCCCHH
Confidence             33333344444   679999999999999999999999999999999 777765               1    1  99


Q ss_pred             hhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          225 SIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       225 ~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      |++++++||  +|+++.|+|||+|.|||||+
T Consensus       234 eva~~v~fL--~s~~s~~itG~~i~vDGG~~  262 (266)
T d1mxha_         234 QIADAIAFL--VSKDAGYITGTTLKVDGGLI  262 (266)
T ss_dssp             HHHHHHHHH--HSGGGTTCCSCEEEESTTGG
T ss_pred             HHHHHHHHH--hCchhCCccCCeEEECccHh
Confidence            999999999  99999999999999999984

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-37  Score=253.24  Aligned_cols=204  Identities=13%  Similarity=0.056  Sum_probs=170.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      +||++|||||++|||++++++|+++|++|+++++++...        ......+.+|.++.++.+.+.+++.+.+  +++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i   72 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE--------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKV   72 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT--------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc--------ccccceeecccCcHHHHHHHHHHHHHHhCCCCc
Confidence            489999999999999999999999999999999876532        1345566788888888888888887765  469


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCcc
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANY  182 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~  182 (255)
                      |+||||||....  .....+.+.++|++++++|+.+++++++.++|+|++  +|+|+++||.    .+..+.+..   ..
T Consensus        73 D~lInnAG~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~G~Iv~isS~----~~~~~~~~~---~~  141 (236)
T d1dhra_          73 DAILCVAGGWAG--GNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE--GGLLTLAGAK----AALDGTPGM---IG  141 (236)
T ss_dssp             EEEEECCCCCCC--BCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCG----GGGSCCTTB---HH
T ss_pred             eEEEECCccccc--ccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc--ccceeEEccH----HHcCCccCC---cc
Confidence            999999874332  234566778999999999999999999999999954  5899999944    444444444   67


Q ss_pred             cccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhh------------Hh--HHhhhhhhhhhhccCCCCCeeece
Q 025252          183 YGVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMA------------EA--IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~------------~~--~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                      |++||+|+++|+++|+.|++  ++|||||+|+| |.++|+            ++  |+++++.+.+|  +++...++||+
T Consensus       142 Y~asKaal~~lt~~la~El~~~~~gI~vn~v~P-G~v~T~~~~~~~~~~~~~~~~~pe~va~~~~~l--~s~~~~~i~G~  218 (236)
T d1dhra_         142 YGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLP-VTLDTPMNRKSMPEADFSSWTPLEFLVETFHDW--ITGNKRPNSGS  218 (236)
T ss_dssp             HHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEE-SCEECHHHHHHSTTSCGGGSEEHHHHHHHHHHH--HTTTTCCCTTC
T ss_pred             cHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEe-ccCcCCcchhhCccchhhcCCCHHHHHHHHHHH--hCCCccCCCCC
Confidence            99999999999999999998  57999999999 888887            11  99999999999  89999999998


Q ss_pred             eEEe
Q 025252          247 NLLV  250 (255)
Q Consensus       247 ~i~~  250 (255)
                      .+.|
T Consensus       219 ~i~v  222 (236)
T d1dhra_         219 LIQV  222 (236)
T ss_dssp             EEEE
T ss_pred             eEEE
Confidence            7766

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-37  Score=252.74  Aligned_cols=198  Identities=19%  Similarity=0.247  Sum_probs=170.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      |+||+++|||||+|||+++|++|+++|++|++++|+++.++++.++.   ....+..+.+|+++.+..+...+++.+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999888877654   335788899999999999999999999999


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCC
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPA  180 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~  180 (255)
                      .+|+++|||+...   ...+.+.+.++|++++++|+.+++.+++.++|+|+ +++|+|+++||.    .+..+.+..   
T Consensus        92 ~~~~li~nag~~~---~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~-~~~G~ii~isS~----~~~~~~p~~---  160 (269)
T d1xu9a_          92 GLDMLILNHITNT---SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLK-QSNGSIVVVSSL----AGKVAYPMV---  160 (269)
T ss_dssp             SCSEEEECCCCCC---CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHH-HHTCEEEEEEEG----GGTSCCTTC---
T ss_pred             Ccccccccccccc---ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHH-hcCCcceEeccc----hhcCCCCCc---
Confidence            9999999987654   25667789999999999999999999999999996 456999999944    344444444   


Q ss_pred             cccccchHHHHHHHHHHHHHhcc--cCcEEeEeccCcchhhhHh--------------HHhhhhhhhhh
Q 025252          181 NYYGVSKFGILGLVKSLAAELGR--YGIRVDCVSHTYGLAMAEA--------------IASIANAALYN  233 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~--~gi~v~~v~p~~~~~t~~~--------------~~~~~~~~~~l  233 (255)
                      ..|++||+|+++|+++|+.|+++  .||+||+|+| |.++|+..              +|+++..+...
T Consensus       161 ~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~P-G~v~T~~~~~~~~~~~~~~~~~~e~~a~~i~~~  228 (269)
T d1xu9a_         161 AAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVL-GLIDTETAMKAVSGIVHMQAAPKEECALEIIKG  228 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEE-CCBCCHHHHHHSCGGGGGGCBCHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEec-CcCCCcHHHHhccCCccccCCCHHHHHHHHHHH
Confidence            78999999999999999999975  5699999999 99988711              77877776654

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=8.8e-36  Score=245.17  Aligned_cols=201  Identities=18%  Similarity=0.229  Sum_probs=158.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCccEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLDIL  105 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id~l  105 (255)
                      |++|||||++|||+++|++|+++|++|++++|+++.               ..+|+++.+..+....++.... +.+|++
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~---------------~~~d~~~~~~~~~~~~~~~~~~~~~id~l   66 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE---------------VIADLSTAEGRKQAIADVLAKCSKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS---------------EECCTTSHHHHHHHHHHHHTTCTTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH---------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEE
Confidence            789999999999999999999999999999997542               3579999998888877776554 679999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc------------
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE------------  173 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~------------  173 (255)
                      +|||+...          ..+.+.+...+|+.+...+.+...+.+.+.....+.++++..........            
T Consensus        67 v~~Ag~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          67 VLCAGLGP----------QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EECCCCCT----------TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEcCCCCC----------cHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            99987543          33567888999999999999999999887777777666632211100000            


Q ss_pred             --------CcCC-CCCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh--------------------H---
Q 025252          174 --------GLCN-IPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA--------------------E---  221 (255)
Q Consensus       174 --------~~~~-~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~--------------------~---  221 (255)
                              ..+. .+..+|++||+|+++|+|+||.||+++|||||+|+| |.++|+                    |   
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~P-G~i~T~~~~~~~~~~~~~~~~~~~~~PlgR  215 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAP-GATETPLLQAGLQDPRYGESIAKFVPPMGR  215 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEE-CC---------------------CCCSTTS
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhcccccccccccccccccccccc-CCcCChhHHhhcCCHHHHHHHHhcCCCCCC
Confidence                    0000 012459999999999999999999999999999999 888775                    1   


Q ss_pred             h--HHhhhhhhhhhhccCCCCCeeeceeEEecCCcC
Q 025252          222 A--IASIANAALYNMAKDDDTSYVGKQNLLVNGGFR  255 (255)
Q Consensus       222 ~--~~~~~~~~~~l~~~~~~~~~~~G~~i~~dgG~~  255 (255)
                      +  |+|+++++.||  +|++++|+|||+|.|||||+
T Consensus       216 ~g~p~eva~~v~fL--~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         216 RAEPSEMASVIAFL--MSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCCTHHHHHHHHHH--TSGGGTTCCSCEEEESTTHH
T ss_pred             CcCHHHHHHHHHHH--hCchhCCccCceEEeCCCcc
Confidence            2  99999999999  99999999999999999984

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.3e-35  Score=239.87  Aligned_cols=204  Identities=16%  Similarity=0.136  Sum_probs=164.4

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH--cCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK--FGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~id  103 (255)
                      .++|+||||++|||++++++|+++|++|++++|+++...        .....+.+|+.+.++.....+.+.+.  +|+||
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD   73 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA--------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVD   73 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS--------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc--------cccceeccccCchhHHHHHHHHHHHHhcCCCee
Confidence            345799999999999999999999999999999876421        23445668888888887777777664  58899


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      +||||||.....  ....+.+.++|+.++++|+.+++++++.++|+|++  +|+|+++||.    ....+.++.   .+|
T Consensus        74 ~linnAG~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~g~Iv~isS~----~~~~~~~~~---~~Y  142 (235)
T d1ooea_          74 GVFCVAGGWAGG--SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP--GGLLQLTGAA----AAMGPTPSM---IGY  142 (235)
T ss_dssp             EEEECCCCCCCB--CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE--EEEEEEECCG----GGGSCCTTB---HHH
T ss_pred             EEEECCcccccc--cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc--ceEEEEeccH----HhcCCcccc---cch
Confidence            999998754321  34455567889999999999999999999999954  5899999954    333344444   679


Q ss_pred             ccchHHHHHHHHHHHHHhc--ccCcEEeEeccCcchhhhHh--------------HHhhhhhhhhhhccCCCCCeeecee
Q 025252          184 GVSKFGILGLVKSLAAELG--RYGIRVDCVSHTYGLAMAEA--------------IASIANAALYNMAKDDDTSYVGKQN  247 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~--~~gi~v~~v~p~~~~~t~~~--------------~~~~~~~~~~l~~~~~~~~~~~G~~  247 (255)
                      ++||+|+++|+++|+.|++  +.+|+||+|+| +.++|+..              |+++++.+++++ .++...++||+.
T Consensus       143 ~asKaal~~l~~~la~e~~~~~~~i~v~~i~P-g~~~T~~~~~~~~~~~~~~~~~~~~va~~~~~~l-~~~~~~~~tG~~  220 (235)
T d1ooea_         143 GMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMP-VTLDTPMNRKWMPNADHSSWTPLSFISEHLLKWT-TETSSRPSSGAL  220 (235)
T ss_dssp             HHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEE-SCBCCHHHHHHSTTCCGGGCBCHHHHHHHHHHHH-HCGGGCCCTTCE
T ss_pred             HHHHHHHHHHHHHHHHHhccCCCceEEEEEec-CcCcCcchhhhCcCCccccCCCHHHHHHHHHHHh-cCccccCCCceE
Confidence            9999999999999999998  47899999999 88888711              799998876441 567788899999


Q ss_pred             EEe
Q 025252          248 LLV  250 (255)
Q Consensus       248 i~~  250 (255)
                      +.|
T Consensus       221 i~v  223 (235)
T d1ooea_         221 LKI  223 (235)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            999

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.94  E-value=6.5e-27  Score=192.15  Aligned_cols=190  Identities=15%  Similarity=0.183  Sum_probs=146.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCc---chHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQD---NLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~---~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++||||++|||++++++|+++|+ +|++++|+.   +..+++.+++.  ..++.++.||++|+++++++++++.+.
T Consensus         8 p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~   87 (259)
T d2fr1a1           8 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD   87 (259)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred             CcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc
Confidence            356999999999999999999999998 688898874   33444444432  257889999999999999999987654


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                       +++|.++||++...   ..++.+.+.++|++++++|+.+++++.+.+    ...+.++|+++|    |..+..+.++. 
T Consensus        88 -~~i~~vv~~ag~~~---~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~~~~iv~~S----S~a~~~g~~~~-  154 (259)
T d2fr1a1          88 -VPLSAVFHAAATLD---DGTVDTLTGERIERASRAKVLGARNLHELT----RELDLTAFVLFS----SFASAFGAPGL-  154 (259)
T ss_dssp             -SCEEEEEECCCCCC---CCCGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSCCSEEEEEE----EHHHHTCCTTC-
T ss_pred             -cccccccccccccc---ccccccccHHHHHHHhhhhccchhHHHHHh----hccCCceEeeec----chhhccCCccc-
Confidence             68999999987654   356778899999999999999999887754    445678999999    44444455444 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-----------------Hh-HHhhhhhhhhhh
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-----------------EA-IASIANAALYNM  234 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-----------------~~-~~~~~~~~~~l~  234 (255)
                        ..|+++|++++.|++.+    +..|++|++|+| +.+.++                 .+ +++.+..+..++
T Consensus       155 --~~YaAaka~l~~la~~~----~~~Gi~v~~I~p-g~~~~~g~~~~~~~~~~~~~G~~~~~~~~~~~~l~~~l  221 (259)
T d2fr1a1         155 --GGYAPGNAYLDGLAQQR----RSDGLPATAVAW-GTWAGSGMAEGPVADRFRRHGVIEMPPETACRALQNAL  221 (259)
T ss_dssp             --TTTHHHHHHHHHHHHHH----HHTTCCCEEEEE-CCBC------------CTTTTEECBCHHHHHHHHHHHH
T ss_pred             --HHHHHHHHhHHHHHHHH----HhCCCCEEECCC-CcccCCccccchHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence              67999999998776554    457999999999 544322                 12 777787777663

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.83  E-value=1.4e-19  Score=154.57  Aligned_cols=171  Identities=14%  Similarity=0.108  Sum_probs=123.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-----hHHHHHHHh--CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-----LGQALADKL--GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-----~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |++|||||||.||..++++|+++|++|++++|...     ..+.+..+.  ...++.++++|++|.+++++++++.    
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~----   77 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV----   77 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH----
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc----
Confidence            78999999999999999999999999999998543     222222211  2257999999999999999999876    


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc----ccCc
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE----IEGL  175 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~----~~~~  175 (255)
                       .+|+++|.|+....       ..+.++.+..+++|+.++.++++++...- .++..++|++||...++...    .+..
T Consensus        78 -~~d~v~h~aa~~~~-------~~~~~~~~~~~~~Nv~gt~nllea~~~~~-~~~~~r~i~~SS~~vYG~~~~~~~~E~~  148 (357)
T d1db3a_          78 -QPDEVYNLGAMSHV-------AVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYGLVQEIPQKETT  148 (357)
T ss_dssp             -CCSEEEECCCCCTT-------TTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred             -CCCEEEEeeccccc-------chhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence             79999998765542       22445667789999999999999987542 23445799988765432211    1122


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +..|.+.|+.||.+.+.+++.+++.   +++++..+.|
T Consensus       149 ~~~P~~~Y~~sK~~~E~~~~~~~~~---~~l~~~ilR~  183 (357)
T d1db3a_         149 PFYPRSPYAVAKLYAYWITVNYRES---YGMYACNGIL  183 (357)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence            3456788999999999999998887   4666666665

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.79  E-value=4.2e-21  Score=150.12  Aligned_cols=154  Identities=14%  Similarity=0.161  Sum_probs=110.6

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ...+|+||+++||||++|||+++++.|+++|++|++++|+.+..+++.+++.. .++....+|+++.+++++++      
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT------
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh------
Confidence            34679999999999999999999999999999999999999888887776643 35667889999999887664      


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCC-CCcEEEeccCCCcccccccCcCC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRR-RGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                       +++|+|||||+..       +...+.+.|++.+++|+.+.++....+.+.+.... .++++..+  ........+   .
T Consensus        91 -~~iDilin~Ag~g-------~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~~g---~  157 (191)
T d1luaa1          91 -KGAHFVFTAGAIG-------LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGK--RAFGALGIG---G  157 (191)
T ss_dssp             -TTCSEEEECCCTT-------CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTE--EEECHHHHH---H
T ss_pred             -cCcCeeeecCccc-------cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecce--EEEeccCcC---c
Confidence             4799999998643       23468899999999999887765544433322211 22222111  001111111   1


Q ss_pred             CCCcccccchHHHHHHHH
Q 025252          178 IPANYYGVSKFGILGLVK  195 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~  195 (255)
                         ..|+++|+++.++++
T Consensus       158 ---~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         158 ---LKLKLHRACIAKLFE  172 (191)
T ss_dssp             ---HHHHHHHHHHHHHTS
T ss_pred             ---HHHHHHHHHHHHHHh
Confidence               359999999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.75  E-value=4.4e-18  Score=145.36  Aligned_cols=171  Identities=18%  Similarity=0.212  Sum_probs=123.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcch--HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNL--GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +||||||+|.||++++++|+++|+++++. ++....  ...+.......++.++.+|++|++.++++++..     .+|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            59999999999999999999999986554 432211  112222223358999999999999999888765     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-----CCCcEEEeccCCCcccccc-------
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-----RRGCILYTTGTGTTACTEI-------  172 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-----~~~~ii~is~~~~~~~~~~-------  172 (255)
                      +||+|+....       ..+.++....+++|+.++.++++.+.....+.     +..+++++||.........       
T Consensus        77 VihlAa~~~~-------~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (361)
T d1kewa_          77 VMHLAAESHV-------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             EEECCSCCCH-------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             EEECccccch-------hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccc
Confidence            9999764331       12345557789999999999999998765332     3457999987654432211       


Q ss_pred             -------cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 -------EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 -------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                             ......|.+.|+.||.+.+.+++.++..   .|+++.++.|
T Consensus       150 ~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~---~~i~~~~lR~  194 (361)
T d1kewa_         150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRT---YGLPTIVTNC  194 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             cCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEec
Confidence                   1122346678999999999999999876   4666777766

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.74  E-value=2.2e-17  Score=139.55  Aligned_cols=168  Identities=15%  Similarity=0.195  Sum_probs=123.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc---hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDN---LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++|||||+|.||+.+++.|+++|++|++++|...   ......+.....++.++++|++|.+.+.+++++.     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            5999999999999999999999999999987432   2222223333468999999999999998888864     7999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----cCcCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----EGLCNIP  179 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----~~~~~~~  179 (255)
                      +||.|+....       ..+.++.++.+++|+.++.++++++...    +-.++|++||.........     ..+...|
T Consensus        77 ViHlAa~~~~-------~~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p  145 (338)
T d1udca_          77 VIHFAGLKAV-------GESVQKPLEYYDNNVNGTLRLISAMRAA----NVKNFIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_dssp             EEECCSCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCC
T ss_pred             EEECCCccch-------hhHHhCHHHHHHhHHHHHHHHHHHHHHh----CCCEEEecCcceEEccccccccccccccCCC
Confidence            9998764321       1244556788999999999999988764    3356888886543322111     2223356


Q ss_pred             CcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          180 ANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       180 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...|+.+|.+.+.+.+..+.+.  .++.+..+.|
T Consensus       146 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~  177 (338)
T d1udca_         146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRY  177 (338)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEE
T ss_pred             cchHHHHHhhhhHHHHHHHhhc--cCCeEEEEee
Confidence            7889999999999988777663  3566666655

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=4.2e-17  Score=140.45  Aligned_cols=173  Identities=16%  Similarity=0.107  Sum_probs=122.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----------------hHHH---HHHHhCCCceEEEEeeCCCHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----------------LGQA---LADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----------------~~~~---~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      ||+|+||||+|.||.+++++|+++|++|+++|....                ...+   ........++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            688999999999999999999999999999863110                1111   111222357899999999999


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCC
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGT  166 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~  166 (255)
                      .++++++..     ++|+++|.|+....    .......+.....+++|+.++.++++.+...   ....+++++|+...
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~----~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~~i~~ss~~~  148 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA----PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF---GEECHLVKLGTMGE  148 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH----HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEECCGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc----ccccccccccccccccccccccHHHHHHHHh---ccccceeecccccc
Confidence            999998876     79999998765431    1122355667788999999999999988754   23345666665433


Q ss_pred             ccccccc-----------------CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          167 TACTEIE-----------------GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       167 ~~~~~~~-----------------~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ......+                 .....|.+.|+.||.+.+.+++.++++   .++++.++.|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~---~~l~~~~lR~  209 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQ  209 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccc---cceeeeeccc
Confidence            2211110                 012345577999999999999888776   5677777765

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=6.7e-17  Score=136.64  Aligned_cols=171  Identities=14%  Similarity=0.093  Sum_probs=121.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-----HHHH---HHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-----GQAL---ADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-----~~~~---~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |.+|||||+|.||..++++|.++|++|+.++|....     .+.+   .......++.++.+|++|.+.+.+++++.   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            344999999999999999999999999999986431     1111   11111247899999999999999998875   


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~  174 (255)
                        .+++++|.++...       ...+.+.....+++|+.++.++++++...-. .+..++|++||....+..    ..+.
T Consensus        79 --~~~~v~~~~a~~~-------~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~-~~~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 --KPTEIYNLGAQSH-------VKISFDLAEYTADVDGVGTLRLLDAVKTCGL-INSVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             --CCSEEEECCSCCC-------HHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-TTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             --ccceeeeeeeccc-------cchhhccchhhhhhHHHHHHHHHHHHHHcCC-CCCcEEEEecchheecCCCCCCCCCC
Confidence              7888888754332       1124556667789999999999998876542 234578888876543221    1122


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+..|.+.|+.||.+.+.+++.+++.   .++.+..+.|
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~---~~~~~~ilr~  184 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREA---YNLFAVNGIL  184 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence            33456788999999999999888776   4566666654

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=1e-16  Score=135.89  Aligned_cols=170  Identities=16%  Similarity=0.220  Sum_probs=122.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch-HH--HHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL-GQ--ALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~-~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |+||||||+|.||+.++++|+++|++|+++++.... ..  ...+.....++.++++|++|.++++++++..     ++|
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~d   76 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KID   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CCC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CCC
Confidence            789999999999999999999999999998764322 11  1122233467899999999999999887754     799


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc--------cCc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI--------EGL  175 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~--------~~~  175 (255)
                      +++|.|+.....       ...+.......+|+.++.++++++...    +-.+++++||.........        ...
T Consensus        77 ~VihlAa~~~~~-------~~~~~~~~~~~~N~~~t~~ll~~~~~~----~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~  145 (347)
T d1z45a2          77 SVIHFAGLKAVG-------ESTQIPLRYYHNNILGTVVLLELMQQY----NVSKFVFSSSATVYGDATRFPNMIPIPEEC  145 (347)
T ss_dssp             EEEECCSCCCHH-------HHHHSHHHHHHHHHHHHHHHHHHHHHH----TCCEEEEEEEGGGGCCGGGSTTCCSBCTTS
T ss_pred             EEEEcccccccc-------ccccCcccccccchhhhHHHHHHHHhc----ccceEEeecceeeecCcccCCCCCcccccc
Confidence            999987644311       133455677889999999999998653    3346888887654432211        123


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...|.+.|+.||.+.+.+.+.+.+.. ..++++..+.|
T Consensus       146 ~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~  182 (347)
T d1z45a2         146 PLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRY  182 (347)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEE
T ss_pred             CCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEee
Confidence            33466789999999999988887653 23555555543

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.69  E-value=1.9e-16  Score=133.34  Aligned_cols=173  Identities=13%  Similarity=0.047  Sum_probs=122.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-----hH---HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-----LG---QALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-----~~---~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .|++|||||||.||+.++++|+++|++|+.++|...     ..   ...........+.++.+|+++.+++++.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            478999999999999999999999999999998532     11   11112223357889999999999999988865  


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEeccCCCcccc---ccc
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTTGTGTTACT---EIE  173 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is~~~~~~~~---~~~  173 (255)
                         ++|+++|.|+....       ..+.+.....+++|+.++..+..++....... ...++++.|+.......   ..+
T Consensus        79 ---~~D~Vih~Aa~~~~-------~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E  148 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHV-------AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE  148 (339)
T ss_dssp             ---CCSEEEECCSCCCH-------HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred             ---ccchhhhccccccc-------cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence               89999998765432       12345667888999999999988887654332 23445555533222111   112


Q ss_pred             CcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          174 GLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       174 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..+..|.+.|+.+|.+.+.+++.+++.   +++.+..+.|
T Consensus       149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilR~  185 (339)
T d1n7ha_         149 TTPFHPRSPYAASKCAAHWYTVNYREA---YGLFACNGIL  185 (339)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             CCCCCCcchhhHHHHHHHHHHHHHHHH---hCCCEEEEEE
Confidence            233457788999999999999988876   4677777776

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.69  E-value=3.8e-16  Score=130.57  Aligned_cols=169  Identities=15%  Similarity=0.083  Sum_probs=121.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch--HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL--GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      |+||||||+|.||++++++|+++|++|+.++|....  ...+.......++.++.+|++|.+.+.+++...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            689999999999999999999999999999987543  222222222357999999999999999888875     6788


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc----cCcCCCCC
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI----EGLCNIPA  180 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~----~~~~~~~~  180 (255)
                      ++++|+.....       ...+.....++.|+.++.+++.++...   ....+++++|+.........    +..+..|.
T Consensus        76 ~~~~a~~~~~~-------~~~~~~~~~~~~n~~g~~~~l~~~~~~---~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFVG-------ASWNQPVTTGVVDGLGVTHLLEAIRQF---SPETRFYQASTSEMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCHH-------HHTTSHHHHHHHHTHHHHHHHHHHHHH---CTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             ccccccccccc-------ccccchHHHHhhhhhchHHHHHHHHHh---CCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence            88876443311       123445778899999999999988654   23456777775432221111    22333567


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +.|+.+|.+.+.+.+.++.+   +++++.++.|
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lr~  175 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRES---FGLHASSGIL  175 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             ChhHHHHHHHHHHHHHHHhh---cCCcEEEEEE
Confidence            88999999999999988877   4566666555

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.68  E-value=5.7e-16  Score=131.19  Aligned_cols=175  Identities=14%  Similarity=0.081  Sum_probs=129.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      ++||+||||||+|.||..+++.|+++|++|++++|+......+.+... ..++.++.+|++|++.+.++.+..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            689999999999999999999999999999999998765444433332 257999999999999998888765     89


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc-----ccCcCC
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE-----IEGLCN  177 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~-----~~~~~~  177 (255)
                      |+++|.|+...       ...+.+..+..+++|+.++.++++++...   .....++++|+........     ......
T Consensus        81 ~~v~~~aa~~~-------~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~---~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~  150 (356)
T d1rkxa_          81 EIVFHMAAQPL-------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GGVKAVVNITSDKCYDNKEWIWGYRENEAM  150 (356)
T ss_dssp             SEEEECCSCCC-------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CCCCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             hhhhhhhcccc-------ccccccCCccccccccccchhhhhhhhcc---cccccccccccccccccccccccccccccc
Confidence            99999865432       12345667888999999999999988754   2334555555332221111     112233


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhc------ccCcEEeEecc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELG------RYGIRVDCVSH  213 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~------~~gi~v~~v~p  213 (255)
                      .|...|+.+|...+.+++.++.++.      .+++.+....|
T Consensus       151 ~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~  192 (356)
T d1rkxa_         151 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRA  192 (356)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEEC
T ss_pred             CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccC
Confidence            4567899999999999998888653      34677777776

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.67  E-value=2.1e-16  Score=133.43  Aligned_cols=161  Identities=15%  Similarity=0.151  Sum_probs=112.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +||||||+|.||++++++|+++| ++|+++++......++.   ...++.++++|+++.+++.+.+.+      ++|+++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~---~~~~~~~i~~Di~~~~~~~~~~~~------~~d~Vi   72 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL---NHPHFHFVEGDISIHSEWIEYHVK------KCDVVL   72 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT---TCTTEEEEECCTTTCSHHHHHHHH------HCSEEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc---cCCCeEEEECccCChHHHHHHHHh------CCCccc
Confidence            59999999999999999999999 58999888655433332   235799999999988766553321      589999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----------cCc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----------EGL  175 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----------~~~  175 (255)
                      |+|+.....       ...+.....+++|+.++.++++.+...     +-+.++.||.........           ..+
T Consensus        73 h~a~~~~~~-------~~~~~~~~~~~~nv~gt~~ll~~~~~~-----~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~  140 (342)
T d2blla1          73 PLVAIATPI-------EYTRNPLRVFELDFEENLRIIRYCVKY-----RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (342)
T ss_dssp             ECBCCCCHH-------HHHHSHHHHHHHHTHHHHHHHHHHHHT-----TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             ccccccccc-------ccccCCccccccccccccccccccccc-----cccccccccccccccccccccccccccccccc
Confidence            987654311       233455678999999999999998643     234556664433222111           112


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEec
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVS  212 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  212 (255)
                      ...|...|+.||.+.+.+++.+++.+   |+++..+.
T Consensus       141 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r  174 (342)
T d2blla1         141 VNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFR  174 (342)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEE
T ss_pred             cCCCcchhhhcccchhhhhhhhhccc---CceeEEee
Confidence            22344679999999999999988874   55555554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.7e-16  Score=129.84  Aligned_cols=158  Identities=15%  Similarity=0.140  Sum_probs=113.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---------chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---------NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      |+||||||+|.||.+++++|+++|++|+.+++..         ....+........++.++++|++|.+.+++++...  
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~--   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY--   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc--
Confidence            6789999999999999999999999999986421         11122223333468999999999999998887753  


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccccc----
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIE----  173 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~----  173 (255)
                         .+|+++|.|+....       ..+.+...+.+++|+.++.++++++...    +-.+++++|+..........    
T Consensus        81 ---~~~~i~h~Aa~~~~-------~~~~~~p~~~~~~Nv~gt~~l~~~~~~~----~v~~~i~~ss~~~~~~~~~~~~~~  146 (346)
T d1ek6a_          81 ---SFMAVIHFAGLKAV-------GESVQKPLDYYRVNLTGTIQLLEIMKAH----GVKNLVFSSSATVYGNPQYLPLDE  146 (346)
T ss_dssp             ---CEEEEEECCSCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGGGGCSCSSSSBCT
T ss_pred             ---ccccccccccccCc-------HhhHhCHHHHHHhhhcccccccchhhhc----Ccccccccccceeeeccccccccc
Confidence               78899998765431       1234456788999999999998887643    34568888865444332221    


Q ss_pred             -CcCCCCCcccccchHHHHHHHHHHHHH
Q 025252          174 -GLCNIPANYYGVSKFGILGLVKSLAAE  200 (255)
Q Consensus       174 -~~~~~~~~~Y~asKaa~~~~~~~la~e  200 (255)
                       .....|.++|+.+|.+.+...+.+++.
T Consensus       147 ~~~~~~~~~~Y~~~k~~~e~~~~~~~~~  174 (346)
T d1ek6a_         147 AHPTGGCTNPYGKSKFFIEEMIRDLCQA  174 (346)
T ss_dssp             TSCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             cccccccCChHHHHHHHHHHHHHHHHHh
Confidence             122345578999999999888877653

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.66  E-value=1e-15  Score=129.14  Aligned_cols=169  Identities=18%  Similarity=0.124  Sum_probs=121.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc----hHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN----LGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~----~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      ++.|++|||||+|.||++++++|.++|++|+.++|...    ..........   ..++.++.+|..|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            56789999999999999999999999999999987432    1222221111   1478899999999887654422   


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cc
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EI  172 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~  172 (255)
                          ..+.++|.+.....       ..+.++....+++|+.++.++++++...    +..++|++||.......    ..
T Consensus        91 ----~~~~v~~~~a~~~~-------~~~~~~~~~~~~~Nv~gt~~ll~~~~~~----~~~~~i~~SS~~vyg~~~~~~~~  155 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSV-------PRSINDPITSNATNIDGFLNMLIAARDA----KVQSFTYAASSSTYGDHPGLPKV  155 (341)
T ss_dssp             ----TCSEEEECCSCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHT----TCSEEEEEEEGGGGTTCCCSSBC
T ss_pred             ----cccccccccccccc-------cccccCccchhheeehhHHHHHHHHHhc----CCceEEEcccceeeCCCCCCCcc
Confidence                67888887543321       2256777889999999999999988653    44579999976544321    11


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +.....|.+.|+.||.+.+.+++.+++..   ++++..+.|
T Consensus       156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~  193 (341)
T d1sb8a_         156 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRY  193 (341)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEE
T ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEe
Confidence            22334567889999999999999998774   555555555

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=6.7e-16  Score=121.32  Aligned_cols=186  Identities=11%  Similarity=-0.018  Sum_probs=119.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      |..|+++||||||+||++++++|+++|++|.++.|++++.+.    ....++.++.+|++|.+++.++++       +.|
T Consensus         1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~----~~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS----EGPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS----SSCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc----ccccccccccccccchhhHHHHhc-------CCC
Confidence            456889999999999999999999999999999999876432    123578899999999998877765       689


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      ++|++++....     .   +..      +++..++.++++    .+++.+-.++|++||.+............   ..|
T Consensus        70 ~vi~~~g~~~~-----~---~~~------~~~~~~~~~l~~----aa~~~~v~r~i~~ss~~~~~~~~~~~~~~---~~~  128 (205)
T d1hdoa_          70 AVIVLLGTRND-----L---SPT------TVMSEGARNIVA----AMKAHGVDKVVACTSAFLLWDPTKVPPRL---QAV  128 (205)
T ss_dssp             EEEECCCCTTC-----C---SCC------CHHHHHHHHHHH----HHHHHTCCEEEEECCGGGTSCTTCSCGGG---HHH
T ss_pred             EEEEEeccCCc-----h---hhh------hhhHHHHHHHHH----HHHhcCCCeEEEEeeeeccCCCccccccc---ccc
Confidence            99998654321     1   111      123334444444    44455667899998554322111100000   123


Q ss_pred             ccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh---------------Hh--HHhhhhhhhhhhccCCCCCeeece
Q 025252          184 GVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA---------------EA--IASIANAALYNMAKDDDTSYVGKQ  246 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~---------------~~--~~~~~~~~~~l~~~~~~~~~~~G~  246 (255)
                      ...|...+.       .++..+++...|.|+..++.+               .+  .+|+|..++..  +.+..  ..|+
T Consensus       129 ~~~~~~~e~-------~l~~~~~~~tiirp~~~~~~~~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~--l~~~~--~~g~  197 (205)
T d1hdoa_         129 TDDHIRMHK-------VLRESGLKYVAVMPPHIGDQPLTGAYTVTLDGRGPSRVISKHDLGHFMLRC--LTTDE--YDGH  197 (205)
T ss_dssp             HHHHHHHHH-------HHHHTCSEEEEECCSEEECCCCCSCCEEESSSCSSCSEEEHHHHHHHHHHT--TSCST--TTTC
T ss_pred             chHHHHHHH-------HHHhcCCceEEEecceecCCCCcccEEEeeCCCCCCCcCCHHHHHHHHHHH--hCCCC--CCCE
Confidence            344444332       234578999999995554332               11  89999988877  43322  3477


Q ss_pred             eEEecC
Q 025252          247 NLLVNG  252 (255)
Q Consensus       247 ~i~~dg  252 (255)
                      .+.+.+
T Consensus       198 ~~~~s~  203 (205)
T d1hdoa_         198 STYPSH  203 (205)
T ss_dssp             EEEEEC
T ss_pred             EEecCC
Confidence            776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.66  E-value=2.9e-16  Score=132.79  Aligned_cols=168  Identities=11%  Similarity=0.037  Sum_probs=118.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH---HhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLG-HQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~---~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .||+|+||||+|.||..++++|+++|++|+++.|+......+..   ... ......+..|+++.+++.+++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            58999999999999999999999999999999998765544432   222 2344567789999988776654       


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc--------
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI--------  172 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~--------  172 (255)
                      ..|.++|+++....       ..   .....++.|+.++.++++.+...   ..-.+++++||.........        
T Consensus        83 ~~~~v~~~a~~~~~-------~~---~~~~~~~~nv~gt~~ll~~~~~~---~~v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 GAAGVAHIASVVSF-------SN---KYDEVVTPAIGGTLNALRAAAAT---PSVKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             TCSEEEECCCCCSC-------CS---CHHHHHHHHHHHHHHHHHHHHTC---TTCCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             cchhhhhhcccccc-------cc---cccccccchhhhHHHHHHhhhcc---cccccccccccceeeccCCCCCCCcccc
Confidence            68999998654331       12   23456788999999998888643   23467888886532211110        


Q ss_pred             ----------------cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 ----------------EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 ----------------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                                      ......|...|+.||.+.+.++..++++.. .++++.++.|
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p  205 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLP  205 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEE
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecc
Confidence                            011112235699999999999998888754 3577777776

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.64  E-value=1.1e-15  Score=130.02  Aligned_cols=166  Identities=15%  Similarity=0.159  Sum_probs=119.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      -++++|+||||+|.||++++++|.++|++|+++++.......  ..  .....+..+|+.+.+++.++.+       ++|
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~--~~--~~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT--ED--MFCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC--GG--GTCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh--hh--cccCcEEEeechhHHHHHHHhh-------cCC
Confidence            367789999999999999999999999999999876443110  01  1345678899999988766543       789


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-----------
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-----------  172 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-----------  172 (255)
                      .+||.|+.....      ..+.+.....+.+|+.++.+++.++...    +-.++|++||.........           
T Consensus        82 ~Vih~a~~~~~~------~~~~~~~~~~~~~n~~gt~~ll~~~~~~----~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~  151 (363)
T d2c5aa1          82 HVFNLAADMGGM------GFIQSNHSVIMYNNTMISFNMIEAARIN----GIKRFFYASSACIYPEFKQLETTNVSLKES  151 (363)
T ss_dssp             EEEECCCCCCCH------HHHTTCHHHHHHHHHHHHHHHHHHHHHT----TCSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             eEeecccccccc------cccccccccccccccchhhHHHHhHHhh----Cccccccccccccccccccccccccccccc
Confidence            999986544311      1123456778889999999999988653    4467999887654432211           


Q ss_pred             cCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          173 EGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       173 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ...+..|.+.|+.||.+.+.+++.+.++   .|+++..+.|
T Consensus       152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~---~gl~~~ilR~  189 (363)
T d2c5aa1         152 DAWPAEPQDAFGLEKLATEELCKHYNKD---FGIECRIGRF  189 (363)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             cCCcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence            1122345678999999999999888877   4777777776

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.64  E-value=8.9e-16  Score=129.89  Aligned_cols=166  Identities=17%  Similarity=0.153  Sum_probs=114.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc---chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD---NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      .|.||||||||.||..++++|.++|++|.++.++.   .........+...++.++.+|++|.+.+..+.+       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            46799999999999999999999998755544321   111111223344689999999999998877754       67


Q ss_pred             cEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc------------
Q 025252          103 DILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT------------  170 (255)
Q Consensus       103 d~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~------------  170 (255)
                      |.++|.|+.....       ....+..+.+++|+.++.+++..+...-     .+++++||....+..            
T Consensus        75 ~~v~~~a~~~~~~-------~~~~~~~~~~~~N~~g~~nll~~~~~~~-----~k~i~~ss~~vyg~~~~~~~~~~~~~~  142 (346)
T d1oc2a_          75 DAIVHYAAESHND-------NSLNDPSPFIHTNFIGTYTLLEAARKYD-----IRFHHVSTDEVYGDLPLREDLPGHGEG  142 (346)
T ss_dssp             SEEEECCSCCCHH-------HHHHCCHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             hhhhhhhhccccc-------chhhCcccceeeehHhHHhhhhhhcccc-----ccccccccceEecccCccccccccccC
Confidence            8888876544311       1233456778999999999998886542     346666644333211            


Q ss_pred             ----cccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          171 ----EIEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       171 ----~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                          ........|.+.|+.+|.+.+.+++.+.++   .++++.++.|
T Consensus       143 ~~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~---~~i~~~ilR~  186 (346)
T d1oc2a_         143 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRS---FGVKATISNC  186 (346)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             cccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCEEEEee
Confidence                001122345678999999999999888876   5888888887

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.64  E-value=3.6e-16  Score=131.04  Aligned_cols=166  Identities=16%  Similarity=0.163  Sum_probs=116.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEE------EEEecCc--chHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKV------VIADVQD--NLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v------~~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++|+||||+|.||+.++++|+++|+.|      +..++..  .....+.......++.++.+|.++........      
T Consensus         1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------   74 (322)
T d1r6da_           1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL------   74 (322)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT------
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccc------
Confidence            359999999999999999999999754      4443321  11111222222357999999999998766543      


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccC
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEG  174 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~  174 (255)
                       ..+|.++|.|+....       ..........+++|+.++.++++++...    +..++|++||.......    ....
T Consensus        75 -~~~d~vi~~a~~~~~-------~~~~~~~~~~~~~N~~gt~~ll~~~~~~----~~~~~I~~Ss~~~yg~~~~~~~~E~  142 (322)
T d1r6da_          75 -RGVDAIVHFAAESHV-------DRSIAGASVFTETNVQGTQTLLQCAVDA----GVGRVVHVSTNQVYGSIDSGSWTES  142 (322)
T ss_dssp             -TTCCEEEECCSCCCH-------HHHHHCCHHHHHHHTHHHHHHHHHHHHT----TCCEEEEEEEGGGGCCCSSSCBCTT
T ss_pred             -cccceEEeecccccc-------cccccchHHHhhhhHHHHHHHHHHHHHc----CCceEEEeecceeecCCCCCCCCCC
Confidence             278999998754431       2244556677889999999999998643    34679998876544322    1223


Q ss_pred             cCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          175 LCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       175 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .+..|.+.|+.||.+.+.+.+.++++   .|+++.++.|
T Consensus       143 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~  178 (322)
T d1r6da_         143 SPLEPNSPYAASKAGSDLVARAYHRT---YGLDVRITRC  178 (322)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEe
Confidence            33456788999999999999999887   4677777776

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.7e-15  Score=126.50  Aligned_cols=161  Identities=19%  Similarity=0.185  Sum_probs=110.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc-hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN-LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .|+|+||||+|.||++++++|+++|++|+++++... ....+.......++.....|+.+.            .+.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCE
Confidence            378999999999999999999999999999987432 222222222223455555555332            1237999


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---------cCc
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---------EGL  175 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---------~~~  175 (255)
                      +||.|+.....       .+.++..+.+++|+.++.++++++...    + -++|++||.........         ...
T Consensus        69 VihlAa~~~~~-------~~~~~~~~~~~~Nv~g~~~ll~~~~~~----~-~k~I~~SS~~vy~~~~~~~~~e~~~~~~~  136 (312)
T d2b69a1          69 IYHLASPASPP-------NYMYNPIKTLKTNTIGTLNMLGLAKRV----G-ARLLLASTSEVYGDPEVHPQSEDYWGHVN  136 (312)
T ss_dssp             EEECCSCCSHH-------HHTTCHHHHHHHHHHHHHHHHHHHHHH----T-CEEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred             EEECcccCCch-------hHHhCHHHHHHHHHHHHHHHHHHHHHc----C-CcEEEEEChheecCCCCCCCCccccCCCC
Confidence            99987644311       122345678899999999999988643    2 36888886544432111         111


Q ss_pred             CCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          176 CNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       176 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      +..|.+.|+.||.+.+.+++.++++   +|+++..+.|
T Consensus       137 ~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~  171 (312)
T d2b69a1         137 PIGPRACYDEGKRVAETMCYAYMKQ---EGVEVRVARI  171 (312)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHHHHH---HCCCEEEEEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHH---hCCcEEEEEe
Confidence            2346678999999999999998887   4677777776

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.63  E-value=1.6e-15  Score=126.34  Aligned_cols=152  Identities=13%  Similarity=0.166  Sum_probs=112.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .|+||||||+|.||++++++|+++|+.++++++..+                  +|+.+.+.++++++.-     .+|.+
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~------------------~~~~~~~~~~~~~~~~-----~~d~v   58 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE------------------LNLLDSRAVHDFFASE-----RIDQV   58 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh------------------ccccCHHHHHHHHhhc-----CCCEE
Confidence            578999999999999999999999999888765322                  5899999988887653     79999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc---------cCcC
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI---------EGLC  176 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~---------~~~~  176 (255)
                      +|+|+..+..      ........+.+++|+.++.++++++...    +-.++|++||.+.......         ....
T Consensus        59 ~~~a~~~~~~------~~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~  128 (315)
T d1e6ua_          59 YLAAAKVGGI------VANNTYPADFIYQNMMIESNIIHAAHQN----DVNKLLFLGSSCIYPKLAKQPMAESELLQGTL  128 (315)
T ss_dssp             EECCCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred             EEcchhcccc------ccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence            9986543311      1133455667889999999999988653    3457999997765432211         1111


Q ss_pred             CCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          177 NIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       177 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..|.+.|+.||.+.+.+++.+.++   +|+++..+.|
T Consensus       129 ~~~~~~Y~~sK~~~E~~~~~~~~~---~gl~~~ilR~  162 (315)
T d1e6ua_         129 EPTNEPYAIAKIAGIKLCESYNRQ---YGRDYRSVMP  162 (315)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEee
Confidence            223356999999999999999887   4788888887

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.61  E-value=1.7e-14  Score=120.68  Aligned_cols=161  Identities=17%  Similarity=0.158  Sum_probs=113.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc--hHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDN--LGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      +||||||+|.||+.++++|+++|++|+++++...  ....+.......++.++.+|+++.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            4899999999999999999999999999875322  2222233233468999999999999999988866     79999


Q ss_pred             EEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccc-------------
Q 025252          106 VNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEI-------------  172 (255)
Q Consensus       106 i~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~-------------  172 (255)
                      ||+|+....       ....++.+..+++|+.++.++++++...   .....|+++|+.........             
T Consensus        77 ih~aa~~~~-------~~~~~~~~~~~~~Nv~gt~nll~~~~~~---~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~  146 (338)
T d1orra_          77 FHLAGQVAM-------TTSIDNPCMDFEINVGGTLNLLEAVRQY---NSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV  146 (338)
T ss_dssp             EECCCCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHH---CTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred             Eeecccccc-------cccccChHHHHHHHHHHHHHHHHhhhcc---ccccccccccccccccccccccccccccccccc
Confidence            998764431       1233456788999999999999988754   23344555553221111100             


Q ss_pred             -------cCcCCCCCcccccchHHHHHHHHHHHHHhcc
Q 025252          173 -------EGLCNIPANYYGVSKFGILGLVKSLAAELGR  203 (255)
Q Consensus       173 -------~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~  203 (255)
                             ......|...|+.+|...+.+.......+..
T Consensus       147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~  184 (338)
T d1orra_         147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL  184 (338)
T ss_dssp             TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred             ccccCcccCCccccccccccccchhhhhhhhhhhccCc
Confidence                   0111234567999999999988888887644

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.56  E-value=3.2e-14  Score=121.81  Aligned_cols=170  Identities=20%  Similarity=0.237  Sum_probs=117.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHH-cCCEEEEEecC---------cchHHHHHHHh----------CCCceEEEEeeCCCH
Q 025252           26 GRVAIITGGASGIGASAAQLFHK-NGAKVVIADVQ---------DNLGQALADKL----------GHQDVCYIHCDVSNE   85 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~r~---------~~~~~~~~~~~----------~~~~~~~~~~D~~~~   85 (255)
                      +++||||||+|.||..++++|++ .|++|+++++-         .+........+          ...++.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45699999999999999999986 68999998741         11122221111          113688899999999


Q ss_pred             HHHHHHHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCC
Q 025252           86 REVINLVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTG  165 (255)
Q Consensus        86 ~~~~~~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~  165 (255)
                      +.++++++..    .++|+++|.|+....       ....+.....+++|+.++..+++++...    +..++++.++..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~-------~~~~~~~~~~~~~N~~~t~~~l~~~~~~----~~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAV-------GESVRDPLKYYDNNVVGILRLLQAMLLH----KCDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCH-------HHHHHCHHHHHHHHHHHHHHHHHHHHHT----TCCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhcccccccc-------cccccccccccccccccccccchhhhcc----CCcccccccccc
Confidence            9988887653    578999998764432       1234456678889999999999888643    334566655433


Q ss_pred             Cccccc-----------ccCcCCCCCcccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          166 TTACTE-----------IEGLCNIPANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       166 ~~~~~~-----------~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ......           .......|.+.|+.+|.+.+.+++.+...   +|++..++.|
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~gl~~~~lR~  202 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEA---YGIKGICLRY  202 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHH---HCCEEEEEEE
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHH---hCCCEEEEec
Confidence            222111           11223345688999999999999888876   5777777776

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=3e-14  Score=113.85  Aligned_cols=155  Identities=14%  Similarity=0.066  Sum_probs=108.1

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      .-++|++|+++||||||.||++++++|+++|.  +|++++|++......    ...++....+|+.+.+++.+.      
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~----~~~~i~~~~~D~~~~~~~~~~------   77 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE----AYKNVNQEVVDFEKLDDYASA------   77 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG----GGGGCEEEECCGGGGGGGGGG------
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc----ccceeeeeeeccccccccccc------
Confidence            34568999999999999999999999999995  899999976542211    113567777888776654433      


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCC
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCN  177 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~  177 (255)
                       ..+.|+++|+++...          .........++|+..+..+++.+..    .+-.+++++|+.+..    ..    
T Consensus        78 -~~~~d~vi~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~fi~~Ss~~~~----~~----  134 (232)
T d2bkaa1          78 -FQGHDVGFCCLGTTR----------GKAGAEGFVRVDRDYVLKSAELAKA----GGCKHFNLLSSKGAD----KS----  134 (232)
T ss_dssp             -GSSCSEEEECCCCCH----------HHHHHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCC----TT----
T ss_pred             -ccccccccccccccc----------cccchhhhhhhcccccceeeecccc----cCccccccCCccccc----cC----
Confidence             347899999875432          2334556678899999998888754    445679999955432    11    


Q ss_pred             CCCcccccchHHHHHHHHHHHHHhcccCc-EEeEeccCc
Q 025252          178 IPANYYGVSKFGILGLVKSLAAELGRYGI-RVDCVSHTY  215 (255)
Q Consensus       178 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi-~v~~v~p~~  215 (255)
                       +...|+.+|...+...+.       .+. ++..+.|+.
T Consensus       135 -~~~~Y~~~K~~~E~~l~~-------~~~~~~~IlRP~~  165 (232)
T d2bkaa1         135 -SNFLYLQVKGEVEAKVEE-------LKFDRYSVFRPGV  165 (232)
T ss_dssp             -CSSHHHHHHHHHHHHHHT-------TCCSEEEEEECCE
T ss_pred             -ccchhHHHHHHhhhcccc-------ccccceEEecCce
Confidence             125599999888765432       233 467788843

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.44  E-value=1.4e-12  Score=103.31  Aligned_cols=197  Identities=11%  Similarity=-0.037  Sum_probs=118.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCE--EEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAK--VVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~--v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++|+||||+|+||++++++|+++|++  |+...|+++....    + ..++.++.+|+++.+++.++++       ++|.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~----~-~~~~~~~~~d~~~~~~~~~~~~-------~~d~   71 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK----I-GGEADVFIGDITDADSINPAFQ-------GIDA   71 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH----T-TCCTTEEECCTTSHHHHHHHHT-------TCSE
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh----c-cCCcEEEEeeeccccccccccc-------ccee
Confidence            68999999999999999999999965  5556777654332    2 2467899999999998877665       6899


Q ss_pred             EEEcCCCccccCc------cCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCC
Q 025252          105 LVNSGCNLEYRGF------VSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNI  178 (255)
Q Consensus       105 li~~a~~~~~~~~------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~  178 (255)
                      +||+++.......      ................+|+.++..+........    .+...+.|+........    .. 
T Consensus        72 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~~~~~~~----~~-  142 (252)
T d2q46a1          72 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG----VKHIVVVGSMGGTNPDH----PL-  142 (252)
T ss_dssp             EEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT----CSEEEEEEETTTTCTTC----GG-
T ss_pred             eEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc----ccccccccccccCCCCc----cc-
Confidence            9998654322110      011111223445566788888888777665543    35566666332221111    00 


Q ss_pred             CCcccccchHHHHHHHHHHHHHhcccCcEEeEeccCcchhhh-------------------Hh--HHhhhhhhhhhhccC
Q 025252          179 PANYYGVSKFGILGLVKSLAAELGRYGIRVDCVSHTYGLAMA-------------------EA--IASIANAALYNMAKD  237 (255)
Q Consensus       179 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p~~~~~t~-------------------~~--~~~~~~~~~~l~~~~  237 (255)
                       ...+...+.........+..   ..|+++..+.|+..+...                   .+  .+|+|.+++..  +.
T Consensus       143 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~ilRp~~v~g~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~--l~  216 (252)
T d2q46a1         143 -NKLGNGNILVWKRKAEQYLA---DSGTPYTIIRAGGLLDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQA--LL  216 (252)
T ss_dssp             -GGGGGCCHHHHHHHHHHHHH---HSSSCEEEEEECEEECSCTTSSCEEEESTTGGGGSSCCEEEHHHHHHHHHHH--TT
T ss_pred             -ccccccchhhhhhhhhhhhh---cccccceeecceEEECCCcchhhhhhccCcccccCCCCeEEHHHHHHHHHHH--hC
Confidence             01122222222222233333   368889999884332221                   11  78999998877  43


Q ss_pred             CCCCeeeceeEEecC
Q 025252          238 DDTSYVGKQNLLVNG  252 (255)
Q Consensus       238 ~~~~~~~G~~i~~dg  252 (255)
                      ++  ...|+++.+-+
T Consensus       217 ~~--~~~g~~~~i~~  229 (252)
T d2q46a1         217 FE--EAKNKAFDLGS  229 (252)
T ss_dssp             CG--GGTTEEEEEEE
T ss_pred             Cc--cccCcEEEEee
Confidence            32  24578887643

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.32  E-value=3.2e-12  Score=104.61  Aligned_cols=136  Identities=19%  Similarity=0.175  Sum_probs=93.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      +++|||||+|.||++++++|.++|..| .++++...               +.+|++|.+.+++++++.     ++|++|
T Consensus         1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~---------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE---------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS---------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc---------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            359999999999999999999888644 44544321               347999999999988876     799999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~~~~~~~~~  182 (255)
                      |+|+.....       .+.+..+..+++|+.++..+..++..     .+.+++++||.......    ..+.....|...
T Consensus        60 h~Aa~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~~-----~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~  127 (298)
T d1n2sa_          60 NAAAHTAVD-------KAESEPELAQLLNATSVEAIAKAANE-----TGAWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (298)
T ss_dssp             ECCCCCCHH-------HHTTCHHHHHHHHTHHHHHHHHHHTT-----TTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             Eeccccccc-------ccccCccccccccccccccchhhhhc-----cccccccccccccccCCCCCCCccccccCCCch
Confidence            998654321       12344467788999999888887732     33556666644322211    112233345678


Q ss_pred             cccchHHHHHHHH
Q 025252          183 YGVSKFGILGLVK  195 (255)
Q Consensus       183 Y~asKaa~~~~~~  195 (255)
                      |+.+|.+.+.+.+
T Consensus       128 y~~~k~~~e~~~~  140 (298)
T d1n2sa_         128 YGKTKLAGEKALQ  140 (298)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHH
Confidence            9999988776543

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.23  E-value=5.8e-11  Score=96.32  Aligned_cols=144  Identities=21%  Similarity=0.208  Sum_probs=96.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++||||||.||++++++|.++|++|+.++|++                   +|++|.+++++++++.     ++|++|
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-------------------~D~~d~~~~~~~l~~~-----~~d~vi   57 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-------------------LDITNVLAVNKFFNEK-----KPNVVI   57 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-------------------CCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-------------------ccCCCHHHHHHHHHHc-----CCCEEE
Confidence            4599999999999999999999999999998753                   5899999999888865     789999


Q ss_pred             EcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccc----cccCcCCCCCcc
Q 025252          107 NSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACT----EIEGLCNIPANY  182 (255)
Q Consensus       107 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~----~~~~~~~~~~~~  182 (255)
                      |+|+....       +.+....+..+..|+.....+...+....     ..+++.|+.......    ........|...
T Consensus        58 h~a~~~~~-------~~~~~~~~~~~~~n~~~~~~~~~~~~~~~-----~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~  125 (281)
T d1vl0a_          58 NCAAHTAV-------DKCEEQYDLAYKINAIGPKNLAAAAYSVG-----AEIVQISTDYVFDGEAKEPITEFDEVNPQSA  125 (281)
T ss_dssp             ECCCCCCH-------HHHHHCHHHHHHHHTHHHHHHHHHHHHHT-----CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSH
T ss_pred             eecccccc-------ccccccchhhccccccccccccccccccc-----ccccccccceeeeccccccccccccccchhh
Confidence            98654431       12334456667788888777766665432     345555533222111    112222345567


Q ss_pred             cccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          183 YGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       183 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      |+.+|...+.+.+.       .+.+...+.|
T Consensus       126 ~~~~k~~~e~~~~~-------~~~~~~i~R~  149 (281)
T d1vl0a_         126 YGKTKLEGENFVKA-------LNPKYYIVRT  149 (281)
T ss_dssp             HHHHHHHHHHHHHH-------HCSSEEEEEE
T ss_pred             hhhhhhHHHHHHHH-------hCCCccccce
Confidence            88888877765432       3445555665

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.21  E-value=4.1e-10  Score=92.25  Aligned_cols=78  Identities=10%  Similarity=0.179  Sum_probs=60.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch----HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL----GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .++|+||||||.||++++++|+++|++|+++.|+...    ..+....+...++.++++|++|.+.+.+.++       +
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            3459999999999999999999999999999997542    1222333344678999999999998776655       6


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      .+.++++++
T Consensus        76 ~~~~~~~~~   84 (312)
T d1qyda_          76 VDVVISALA   84 (312)
T ss_dssp             CSEEEECCC
T ss_pred             cchhhhhhh
Confidence            788888643

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.14  E-value=5.6e-11  Score=92.92  Aligned_cols=161  Identities=15%  Similarity=0.071  Sum_probs=103.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|+++||||||.||++++++|.++|+  +|+...|++...        ..+   +..+..|..++.+      ...+.+|
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~--------~~~---~~~~~~d~~~~~~------~~~~~~d   64 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE--------HPR---LDNPVGPLAELLP------QLDGSID   64 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC--------CTT---EECCBSCHHHHGG------GCCSCCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh--------ccc---ccccccchhhhhh------ccccchh
Confidence            48899999999999999999999997  566666654321        112   3344444443322      1235789


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCccc
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPANYY  183 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~~Y  183 (255)
                      .++++++....         .....+...++|+.++..+++.+..    .+-.+++++|+.+...         .+...|
T Consensus        65 ~vi~~~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~a~~----~~v~~~i~~Ss~~~~~---------~~~~~y  122 (212)
T d2a35a1          65 TAFCCLGTTIK---------EAGSEEAFRAVDFDLPLAVGKRALE----MGARHYLVVSALGADA---------KSSIFY  122 (212)
T ss_dssp             EEEECCCCCHH---------HHSSHHHHHHHHTHHHHHHHHHHHH----TTCCEEEEECCTTCCT---------TCSSHH
T ss_pred             eeeeeeeeecc---------ccccccccccchhhhhhhccccccc----cccccccccccccccc---------ccccch
Confidence            99998654321         1122356778899999888888753    3456788888554321         122559


Q ss_pred             ccchHHHHHHHHHHHHHhcccCc-EEeEeccCcchhhh-----------------------Hh-HHhhhhhhhhh
Q 025252          184 GVSKFGILGLVKSLAAELGRYGI-RVDCVSHTYGLAMA-----------------------EA-IASIANAALYN  233 (255)
Q Consensus       184 ~asKaa~~~~~~~la~e~~~~gi-~v~~v~p~~~~~t~-----------------------~~-~~~~~~~~~~l  233 (255)
                      ..+|...+...+       ..+. +...+.| +.+-.+                       +. .+|+|.++..+
T Consensus       123 ~~~K~~~E~~l~-------~~~~~~~~I~Rp-~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~  189 (212)
T d2a35a1         123 NRVKGELEQALQ-------EQGWPQLTIARP-SLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRL  189 (212)
T ss_dssp             HHHHHHHHHHHT-------TSCCSEEEEEEC-CSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHhhhcc-------ccccccceeeCC-cceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHH
Confidence            999987775443       3343 5777888 433221                       11 78888888877

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.06  E-value=2.5e-09  Score=89.60  Aligned_cols=76  Identities=16%  Similarity=0.060  Sum_probs=58.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHH-HHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREV-INLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~-~~~~~~~~~~~g~id  103 (255)
                      ++|+|+||||||.||.+++++|+++|++|+++.|+........ .....++..+++|++|+.++ +.+       +...|
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~-~~~~~~v~~~~gD~~d~~~~~~~a-------~~~~~   73 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEE-LQAIPNVTLFQGPLLNNVPLMDTL-------FEGAH   73 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHH-HHTSTTEEEEESCCTTCHHHHHHH-------HTTCS
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhh-hcccCCCEEEEeeCCCcHHHHHHH-------hcCCc
Confidence            5789999999999999999999999999999999876543221 12235789999999986653 222       23678


Q ss_pred             EEEEc
Q 025252          104 ILVNS  108 (255)
Q Consensus       104 ~li~~  108 (255)
                      .++.+
T Consensus        74 ~~~~~   78 (350)
T d1xgka_          74 LAFIN   78 (350)
T ss_dssp             EEEEC
T ss_pred             eEEee
Confidence            87764

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.04  E-value=4.4e-09  Score=85.33  Aligned_cols=79  Identities=11%  Similarity=0.222  Sum_probs=61.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH-----HHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG-----QALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ..|+|+||||||.||++++++|+++|++|++++|+....     ......+....+.++.+|+.+.....+.++      
T Consensus         2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (307)
T d1qyca_           2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK------   75 (307)
T ss_dssp             CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh------
Confidence            357799999999999999999999999999999975432     112223334578899999999998777665      


Q ss_pred             CCccEEEEcCC
Q 025252          100 GKLDILVNSGC  110 (255)
Q Consensus       100 g~id~li~~a~  110 (255)
                       ..+.++++++
T Consensus        76 -~~~~vi~~~~   85 (307)
T d1qyca_          76 -NVDVVISTVG   85 (307)
T ss_dssp             -TCSEEEECCC
T ss_pred             -hceeeeeccc
Confidence             6788888653

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.02  E-value=1.4e-13  Score=106.39  Aligned_cols=44  Identities=18%  Similarity=0.319  Sum_probs=39.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++.+++.++++
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~   45 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYR   45 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence            47788888999999999999999999999999988888877664

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=98.89  E-value=3.6e-09  Score=86.23  Aligned_cols=158  Identities=18%  Similarity=0.194  Sum_probs=91.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCcch--HHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHH--HcCCcc
Q 025252           29 AIITGGASGIGASAAQLFHKNGA-KVVIADVQDNL--GQALADKLGHQDVCYIHCDVSNEREVINLVDTTVA--KFGKLD  103 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~--~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~id  103 (255)
                      ||||||+|.||..++++|+++|+ +|+++++....  .....+.        ..+|..+.+..   .+....  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL--------NIADYMDKEDF---LIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS--------CCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccccc--------chhhhccchHH---HHHHhhhhcccchh
Confidence            79999999999999999999996 68777643322  2222111        11233333333   222222  235678


Q ss_pred             EEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCccccc---ccCcCCCCC
Q 025252          104 ILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTE---IEGLCNIPA  180 (255)
Q Consensus       104 ~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~---~~~~~~~~~  180 (255)
                      +++|.|+...         ......+...+.|+.++..+...+...-    ...++..|+........   .......|.
T Consensus        71 ~i~~~aa~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~----i~~v~~ss~~~~~~~~~~~~~~~~~~~~~  137 (307)
T d1eq2a_          71 AIFHEGACSS---------TTEWDGKYMMDNNYQYSKELLHYCLERE----IPFLYASSAATYGGRTSDFIESREYEKPL  137 (307)
T ss_dssp             EEEECCSCCC---------TTCCCHHHHHHHTHHHHHHHHHHHHHHT----CCEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             hhhhhccccc---------cccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccc
Confidence            8888764332         1122335566778888888877776542    23444444322111111   011222455


Q ss_pred             cccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          181 NYYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       181 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      ..|+.+|.+.+.+.+.++.+   .++.+..+.|
T Consensus       138 ~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~  167 (307)
T d1eq2a_         138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRY  167 (307)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEE
T ss_pred             cccccccchhhhhccccccc---cccccccccc
Confidence            78999999999998887766   4555555544

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=98.00  E-value=1.2e-05  Score=57.12  Aligned_cols=71  Identities=17%  Similarity=0.341  Sum_probs=58.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++++|.|+ |.+|+.+++.|.+.|++|++++++++..+++.+++   ...++.+|.++++-++++      .....|.++
T Consensus         1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~---~~~vi~Gd~~~~~~l~~~------~i~~a~~vv   70 (132)
T d1lssa_           1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---DALVINGDCTKIKTLEDA------GIEDADMYI   70 (132)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhh---hhhhccCcccchhhhhhc------Chhhhhhhc
Confidence            46899998 89999999999999999999999999888777654   467889999999987665      113567777


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      -
T Consensus        71 ~   71 (132)
T d1lssa_          71 A   71 (132)
T ss_dssp             E
T ss_pred             c
Confidence            5

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.99  E-value=1.8e-05  Score=58.69  Aligned_cols=72  Identities=17%  Similarity=0.240  Sum_probs=56.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      .|.++|.|+ |.+|+.+|+.|+++|++|++++|+.++.+++.+.+.  .......+..+.......+.       ..|.+
T Consensus         2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~--~~~~~~~~~~~~~~~~~~i~-------~~~~~   71 (182)
T d1e5qa1           2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHDLV   71 (182)
T ss_dssp             CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCT--TEEEEECCTTCHHHHHHHHT-------TSSEE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccc--ccccccccccchhhhHhhhh-------cccee
Confidence            588999987 899999999999999999999999999998887654  34455566666666655543       56777


Q ss_pred             EE
Q 025252          106 VN  107 (255)
Q Consensus       106 i~  107 (255)
                      +.
T Consensus        72 i~   73 (182)
T d1e5qa1          72 IS   73 (182)
T ss_dssp             EE
T ss_pred             Ee
Confidence            75

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.96  E-value=5.1e-05  Score=56.89  Aligned_cols=80  Identities=14%  Similarity=0.310  Sum_probs=60.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHH---HHhCC-CceEEEEeeCCCHHHHHHHHHHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALA---DKLGH-QDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~---~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .++++|+++|.|+ ||.|++++..|.+.|. ++.++.|+.+..+++.   ++++. ........|+.+.+++.+...   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            4578999999999 6999999999999986 7888999877655443   33321 234466789999888766554   


Q ss_pred             HHcCCccEEEEcC
Q 025252           97 AKFGKLDILVNSG  109 (255)
Q Consensus        97 ~~~g~id~li~~a  109 (255)
                          ..|++||+.
T Consensus        90 ----~~diiIN~T   98 (182)
T d1vi2a1          90 ----SADILTNGT   98 (182)
T ss_dssp             ----TCSEEEECS
T ss_pred             ----ccceecccc
Confidence                689999973

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.93  E-value=5.8e-05  Score=55.72  Aligned_cols=81  Identities=15%  Similarity=0.196  Sum_probs=54.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~id  103 (255)
                      .+.+++|+| +|++|...+..+...|++|+++++++++.+.+.+ +.....  +..|-. .++..+..+++.+.. +++|
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~-~ga~~~--~~~~~~-~~~~~~~~~~~~~~~g~g~D  100 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN-CGADVT--LVVDPA-KEEESSIIERIRSAIGDLPN  100 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TTCSEE--EECCTT-TSCHHHHHHHHHHHSSSCCS
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHH-cCCcEE--Eecccc-ccccchhhhhhhcccccCCc
Confidence            466789997 5899999999888899999999999887655544 332222  222221 223334445555554 4699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|.+.+
T Consensus       101 ~vid~~g  107 (170)
T d1e3ja2         101 VTIDCSG  107 (170)
T ss_dssp             EEEECSC
T ss_pred             eeeecCC
Confidence            9998654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.89  E-value=5.1e-05  Score=55.63  Aligned_cols=71  Identities=20%  Similarity=0.375  Sum_probs=54.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++++++++|.|+ |++|+.+++.|...|. ++.++.|+.++..++..+++.   ...  +   .+++.+.+.       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~---~~~--~---~~~~~~~l~-------~   84 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---EAV--R---FDELVDHLA-------R   84 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---EEC--C---GGGHHHHHH-------T
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc---ccc--c---chhHHHHhc-------c
Confidence            578999999998 9999999999999997 699999998888888887652   111  2   233333333       6


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      .|++|++.
T Consensus        85 ~Divi~at   92 (159)
T d1gpja2          85 SDVVVSAT   92 (159)
T ss_dssp             CSEEEECC
T ss_pred             CCEEEEec
Confidence            89999963

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=5.8e-05  Score=56.00  Aligned_cols=78  Identities=15%  Similarity=0.233  Sum_probs=53.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++++++|+|++|++|...++.....|++|+++++++++.+.+ .+++...+    .|.++++-.+++.+...  -.++|+
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~v----i~~~~~~~~~~i~~~t~--~~g~d~  100 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAHEV----FNHREVNYIDKIKKYVG--EKGIDI  100 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEE----EETTSTTHHHHHHHHHC--TTCEEE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc-cccCcccc----cccccccHHHHhhhhhc--cCCceE
Confidence            578899999999999999998888999999999887655444 44543322    36666543333322221  135899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       101 v~d~~  105 (174)
T d1yb5a2         101 IIEML  105 (174)
T ss_dssp             EEESC
T ss_pred             Eeecc
Confidence            99853

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.69  E-value=4.7e-05  Score=56.97  Aligned_cols=78  Identities=17%  Similarity=0.233  Sum_probs=52.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +|.+++|+||++++|.+.++.....|++|+.+++++++.+.+. +++...+    +|-++.+..+.+.+..  ...++|+
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~v----i~~~~~~~~~~~~~~~--~~~Gvd~  101 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAA----FNYKTVNSLEEALKKA--SPDGYDC  101 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEE----EETTSCSCHHHHHHHH--CTTCEEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhh----cccccccHHHHHHHHh--hcCCCce
Confidence            5889999999999999999988889999999998877654444 3332222    2333333333333322  1246999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus       102 v~D~v  106 (182)
T d1v3va2         102 YFDNV  106 (182)
T ss_dssp             EEESS
T ss_pred             eEEec
Confidence            99853

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.65  E-value=0.00032  Score=48.00  Aligned_cols=44  Identities=23%  Similarity=0.450  Sum_probs=38.2

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .+|-.++++||+++|+|+ |.+|..-++.|++.|++|.+.+....
T Consensus         3 ~~Pi~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           3 HLPIFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CEEEEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             ccceEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCC
Confidence            356678899999999999 56999999999999999999887654

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.63  E-value=0.0001  Score=54.92  Aligned_cols=76  Identities=17%  Similarity=0.238  Sum_probs=49.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+.+++|+||+||.|...++.....|++|+.+.+++++.+.+. ++..+.+.    |-++  ...+.++.+  .-+++|+
T Consensus        31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi----~~~~--~~~~~~~~~--~~~gvD~  101 (176)
T d1xa0a2          31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVL----ARED--VMAERIRPL--DKQRWAA  101 (176)
T ss_dssp             GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEE----ECC-----------C--CSCCEEE
T ss_pred             CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceee----ecch--hHHHHHHHh--hccCcCE
Confidence            4778999999999999988888889999999999888765554 44433222    2221  112222211  1257999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus       102 vid~v  106 (176)
T d1xa0a2         102 AVDPV  106 (176)
T ss_dssp             EEECS
T ss_pred             EEEcC
Confidence            99864

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.59  E-value=0.0001  Score=54.49  Aligned_cols=50  Identities=16%  Similarity=0.217  Sum_probs=44.3

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH   72 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~   72 (255)
                      .++++|.++|.|+ ||.+++++..|.+.|.++.++.|+.++.+++.+.+..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~   63 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH   63 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhh
Confidence            4568999999998 8899999999999999999999999988888877653

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.00081  Score=49.34  Aligned_cols=79  Identities=16%  Similarity=0.292  Sum_probs=53.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  102 (255)
                      .+.+++|.|+ |++|...+..+...|+ +|+++++++.+++.+ ++++..  ..+..+-.+..+..+.++.   .+ .++
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~--~~~~~~~~~~~~~~~~~~~---~~g~g~   98 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGAD--LVLQISKESPQEIARKVEG---QLGCKP   98 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCS--EEEECSSCCHHHHHHHHHH---HHTSCC
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCc--ccccccccccccccccccc---cCCCCc
Confidence            4667899987 9999999999988998 799999998876654 444422  2233333444444444333   33 479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus        99 Dvvid~~G  106 (171)
T d1pl8a2          99 EVTIECTG  106 (171)
T ss_dssp             SEEEECSC
T ss_pred             eEEEeccC
Confidence            99998654

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.56  E-value=0.00011  Score=54.64  Aligned_cols=76  Identities=18%  Similarity=0.114  Sum_probs=54.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      .+++++|+||++++|...++.....|++|+++++++++.+.+.+ ++..    ..+|-++++-.+    ++++..  ..+
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~-lGa~----~vi~~~~~d~~~----~v~~~t~g~g~   98 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK-AGAW----QVINYREEDLVE----RLKEITGGKKV   98 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH-HTCS----EEEETTTSCHHH----HHHHHTTTCCE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh-cCCe----EEEECCCCCHHH----HHHHHhCCCCe
Confidence            47899999999999999999888899999999999888765554 4432    123655543333    333322  368


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |+++.+.
T Consensus        99 d~v~d~~  105 (179)
T d1qora2          99 RVVYDSV  105 (179)
T ss_dssp             EEEEECS
T ss_pred             EEEEeCc
Confidence            9988854

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.53  E-value=3.9e-05  Score=54.37  Aligned_cols=70  Identities=17%  Similarity=0.320  Sum_probs=54.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |.++|.|. |-+|+.+++.|.+.|++|++++.+++..+++.++    ....+.+|.++++.++++  .    ..+.|.+|
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~----~~~~~~gd~~~~~~l~~a--~----i~~a~~vi   69 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY----ATHAVIANATEENELLSL--G----IRNFEYVI   69 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTT----CSEEEECCTTCTTHHHHH--T----GGGCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHh----CCcceeeecccchhhhcc--C----CccccEEE
Confidence            45777777 7899999999999999999999998877766543    445677999999877664  1    12567776


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      .
T Consensus        70 ~   70 (134)
T d2hmva1          70 V   70 (134)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.48  E-value=0.00023  Score=52.59  Aligned_cols=72  Identities=14%  Similarity=0.245  Sum_probs=56.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .++++|.++|.|+ ||.+++++..|.+.+.++.++.|+.++.+++.+.+.. .++..+..|-.+              ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~~~--------------~~   78 (171)
T d1p77a1          14 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDSIP--------------LQ   78 (171)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGGCC--------------CS
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcccc--------------cc
Confidence            3568999999988 7889999999999889999999999998888887753 244455444211              24


Q ss_pred             CccEEEEc
Q 025252          101 KLDILVNS  108 (255)
Q Consensus       101 ~id~li~~  108 (255)
                      ..|++||+
T Consensus        79 ~~diiIN~   86 (171)
T d1p77a1          79 TYDLVINA   86 (171)
T ss_dssp             CCSEEEEC
T ss_pred             ccceeeec
Confidence            78999996

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.46  E-value=0.00015  Score=54.04  Aligned_cols=76  Identities=21%  Similarity=0.276  Sum_probs=52.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~i  102 (255)
                      .|++++|+||+|++|...++.....|.+|+++++++++.+.+ .+.+...    ..|-.+++-    .+++++..  .++
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~~~Ga~~----vi~~~~~~~----~~~v~~~t~~~g~   95 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVEY----VGDSRSVDF----ADEILELTDGYGV   95 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCSE----EEETTCSTH----HHHHHHHTTTCCE
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-ccccccc----cccCCccCH----HHHHHHHhCCCCE
Confidence            478999999999999999998888999999999887765444 4443221    134444432    23344433  369


Q ss_pred             cEEEEcC
Q 025252          103 DILVNSG  109 (255)
Q Consensus       103 d~li~~a  109 (255)
                      |+++.+.
T Consensus        96 d~v~d~~  102 (183)
T d1pqwa_          96 DVVLNSL  102 (183)
T ss_dssp             EEEEECC
T ss_pred             EEEEecc
Confidence            9999854

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.41  E-value=0.00016  Score=45.89  Aligned_cols=43  Identities=30%  Similarity=0.501  Sum_probs=36.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      ++++++|+|+++|.|...++.+...|++|+.+.+++++.+.+.
T Consensus        31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            5778999999999999999988889999999998887765443

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=97.40  E-value=0.00029  Score=50.91  Aligned_cols=73  Identities=10%  Similarity=0.064  Sum_probs=58.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~  107 (255)
                      .++|.|. +.+|+.+++.|.+.|.++++++.+++...+..++....++.++.+|.++++.++++-      ....|.+|-
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~------i~~a~~vi~   77 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAG------IDRCRAILA   77 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHT------TTTCSEEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhc------cccCCEEEE
Confidence            4888888 689999999999999999999998876666655554467889999999998776651      135677775

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.34  E-value=0.00088  Score=48.00  Aligned_cols=111  Identities=16%  Similarity=0.121  Sum_probs=62.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhC-----CCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLG-----HQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +++++.|.|+ |.+|..++..|+.+|  .++++.+++++..+.....+.     .........|   +++          
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d---~~~----------   69 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGE---YSD----------   69 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECC---GGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeecc---HHH----------
Confidence            3457888996 899999999999988  589999999875443332221     1233334444   221          


Q ss_pred             HcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           98 KFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        98 ~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                       ...-|++|..+|.....      ..+   -...++.|..-.-.+.+.+.+   ...++.++++|
T Consensus        70 -~~~adivvitag~~~~~------g~~---r~~l~~~N~~i~~~~~~~i~~---~~p~aivivvt  121 (146)
T d1ez4a1          70 -CKDADLVVITAGAPQKP------GES---RLDLVNKNLNILSSIVKPVVD---SGFDGIFLVAA  121 (146)
T ss_dssp             -GTTCSEEEECCCC-------------------CHHHHHHHHHHHHHHHHH---TTCCSEEEECS
T ss_pred             -hccccEEEEecccccCC------CCC---HHHHHHHHHHHHHHHHHHHhh---cCCCcEEEEeC
Confidence             12579999976643311      111   223334454433333333332   23566677766

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.27  E-value=0.0029  Score=45.03  Aligned_cols=113  Identities=16%  Similarity=0.206  Sum_probs=65.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCCC-ceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGHQ-DVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ++.|+||+|.+|.+++..++.+|  .++++.+.++.+.+. . .+... .......-+. ..+..+.+       ..-|+
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~-Dl~~~~~~~~~~~~~~-~~~~~~~~-------~~aDi   71 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-A-DLSHIETRATVKGYLG-PEQLPDCL-------KGCDV   71 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-H-HHTTSSSSCEEEEEES-GGGHHHHH-------TTCSE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-H-HHhhhhhhcCCCeEEc-CCChHHHh-------CCCCE
Confidence            58899999999999999999887  479999987654322 2 33321 1222221221 22222222       26799


Q ss_pred             EEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          105 LVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       105 li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      +|..||....+      ..+..+   .++.|..-.-.+.+.+.++   ...+.++++|
T Consensus        72 vVitag~~~~~------g~sR~~---ll~~N~~i~~~i~~~i~~~---~p~~iiivvt  117 (144)
T d1mlda1          72 VVIPAGVPRKP------GMTRDD---LFNTNATIVATLTAACAQH---CPDAMICIIS  117 (144)
T ss_dssp             EEECCSCCCCT------TCCGGG---GHHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             EEECCCcCCCC------CCCcch---HHHHHHHHHHHHHHHHHhc---CCCeEEEEec
Confidence            99977653311      223333   3455665554455555443   3467787777

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.25  E-value=0.0006  Score=50.21  Aligned_cols=73  Identities=18%  Similarity=0.326  Sum_probs=51.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .+++++|+|++|++|...++.....|++|+.+++++++.+.+. +++.+.+    .|..+..      ++. ...+++|+
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~----i~~~~~~------~~~-~~~~g~D~   94 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEA----ATYAEVP------ERA-KAWGGLDL   94 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEE----EEGGGHH------HHH-HHTTSEEE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-cccccee----eehhhhh------hhh-hccccccc
Confidence            6788999999999999999988889999999998877665544 4443222    2433221      122 22357999


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++++.
T Consensus        95 v~d~~   99 (171)
T d1iz0a2          95 VLEVR   99 (171)
T ss_dssp             EEECS
T ss_pred             ccccc
Confidence            99853

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.21  E-value=0.0012  Score=48.86  Aligned_cols=79  Identities=14%  Similarity=0.214  Sum_probs=52.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .|.+++|+|+ |++|...+..+...|+ +|+++++++++.+.+ ++++..  .++  |.++. +..+..+++.+..  .+
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~--~vi--~~~~~-~~~~~~~~i~~~~~~~g  100 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGAD--LTL--NRRET-SVEERRKAIMDITHGRG  100 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCS--EEE--ETTTS-CHHHHHHHHHHHTTTSC
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc-ccccce--EEE--ecccc-chHHHHHHHHHhhCCCC
Confidence            5788999997 8999999999988997 799999988876544 455422  222  33322 1222233444432  25


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|.+.|
T Consensus       101 ~Dvvid~vG  109 (182)
T d1vj0a2         101 ADFILEATG  109 (182)
T ss_dssp             EEEEEECSS
T ss_pred             ceEEeecCC
Confidence            899998654

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.08  E-value=0.0012  Score=50.80  Aligned_cols=80  Identities=21%  Similarity=0.269  Sum_probs=54.7

Q ss_pred             eecCeEEEEecC----------------CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH
Q 025252           23 RLQGRVAIITGG----------------ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER   86 (255)
Q Consensus        23 ~~~~k~~lVtGa----------------s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~   86 (255)
                      +|+||++|||+|                ||..|.++|+.+..+|++|.++.-.....       ....+..+  .+.+.+
T Consensus         3 dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~-------~p~~~~~~--~~~t~~   73 (223)
T d1u7za_           3 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP-------TPPFVKRV--DVMTAL   73 (223)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC-------CCTTEEEE--ECCSHH
T ss_pred             ccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccC-------cccccccc--eehhhH
Confidence            578888998876                68899999999999999999976543321       11233333  445556


Q ss_pred             HHHHHHHHHHHHcCCccEEEEcCCCccc
Q 025252           87 EVINLVDTTVAKFGKLDILVNSGCNLEY  114 (255)
Q Consensus        87 ~~~~~~~~~~~~~g~id~li~~a~~~~~  114 (255)
                      +..+.+.+.   ....|++|++|....+
T Consensus        74 ~m~~~~~~~---~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          74 EMEAAVNAS---VQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHH---GGGCSEEEECCBCCSE
T ss_pred             HHHHHHHhh---hccceeEeeeechhhh
Confidence            555554443   3467999998665544

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.06  E-value=0.0018  Score=46.77  Aligned_cols=119  Identities=17%  Similarity=0.171  Sum_probs=65.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +.+++.|.|+ |.+|..++..++..+ .++++.+.+++..+.....+.+     .....+..+ ++.+   +..      
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~-~~~~---~~~------   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSYE---AAL------   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSHH---HHH------
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEecc-Cchh---hhh------
Confidence            5667888997 999999999888888 5899999988765444333221     111111111 1222   111      


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                       ..-|++|..++....++ ++..+.+..+   .++.|..-...+++.+.++   .+.+.++++|
T Consensus        75 -~~adiVvitag~~~~~g-~~~~~~tR~~---l~~~n~~iv~~i~~~i~~~---~p~aiviivs  130 (154)
T d1pzga1          75 -TGADCVIVTAGLTKVPG-KPDSEWSRND---LLPFNSKIIREIGQNIKKY---CPKTFIIVVT  130 (154)
T ss_dssp             -TTCSEEEECCSCSSCTT-CCGGGCCGGG---GHHHHHHHHHHHHHHHHHH---CTTCEEEECC
T ss_pred             -cCCCeEEEecccccCCC-CCCcccchhh---hhhhhHHHHHHHHHHHHhc---CCCcEEEEeC
Confidence             26799998876554322 1111123322   2344544444444444332   3567777777

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.05  E-value=0.001  Score=48.59  Aligned_cols=79  Identities=15%  Similarity=0.274  Sum_probs=51.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+.+++|+|++|++|...+..+...|. +|+++++++++.+.+. +++..  .  ..|.++.+..++..+..  .-+.+|
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~--~--~i~~~~~~~~~~~~~~~--~~~~~d   99 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGAD--Y--VINASMQDPLAEIRRIT--ESKGVD   99 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCS--E--EEETTTSCHHHHHHHHT--TTSCEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCc--e--eeccCCcCHHHHHHHHh--hcccch
Confidence            567899999999999999999988884 8888888877655544 34322  1  23444443333332221  114589


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      +++.+.+
T Consensus       100 ~vid~~g  106 (170)
T d1jvba2         100 AVIDLNN  106 (170)
T ss_dssp             EEEESCC
T ss_pred             hhhcccc
Confidence            9998654

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.03  E-value=0.00044  Score=51.77  Aligned_cols=81  Identities=22%  Similarity=0.241  Sum_probs=48.6

Q ss_pred             CeE-EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHhCCCceEEEEeeCCCHHHHHHHHHHHHHH-cC
Q 025252           26 GRV-AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKLGHQDVCYIHCDVSNEREVINLVDTTVAK-FG  100 (255)
Q Consensus        26 ~k~-~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g  100 (255)
                      |++ ++++||+|++|.+.++..-..|++|+++.++.+..++..   .+++...+  +.-|-.+..+..+.++++.+. .+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~v--i~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQV--ITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEE--EEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEE--EeccccchhHHHHHHHHHHhhccC
Confidence            444 455799999999988888778999999988766554443   34443222  222211112223333443333 35


Q ss_pred             CccEEEEc
Q 025252          101 KLDILVNS  108 (255)
Q Consensus       101 ~id~li~~  108 (255)
                      ++|+++++
T Consensus       107 ~vdvv~D~  114 (189)
T d1gu7a2         107 EAKLALNC  114 (189)
T ss_dssp             CEEEEEES
T ss_pred             CceEEEEC
Confidence            79999985

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.97  E-value=0.0004  Score=51.02  Aligned_cols=46  Identities=26%  Similarity=0.395  Sum_probs=40.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++|.++|.|+ ||.+++++..|.+.|. ++.++.|+.++.+++.+.++
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~   62 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYG   62 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHT
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhh
Confidence            5778999988 8999999999999996 79999999998888887765

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.93  E-value=0.0035  Score=44.65  Aligned_cols=34  Identities=21%  Similarity=0.376  Sum_probs=30.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDN   61 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~   61 (255)
                      ++.|+||+|.+|.+++..++.+|  .++++.++++.
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~   37 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHS   37 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhh
Confidence            58999999999999999999988  58999998864

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.87  E-value=0.0027  Score=45.39  Aligned_cols=72  Identities=15%  Similarity=0.165  Sum_probs=50.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +..-|++.|.||.|.+|.++++.|.+.|++|.+.+|+.....+....  ......+..   ....+...+.++....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~~--~~~~v~~~~---~~~~~~~v~~~~~~~~   77 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESILA--NADVVIVSV---PINLTLETIERLKPYL   77 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHHT--TCSEEEECS---CGGGHHHHHHHHGGGC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhhh--hcccccccc---chhhheeeeecccccc
Confidence            34556799999999999999999999999999999987765543332  223333333   3455566666665543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.84  E-value=0.0013  Score=48.95  Aligned_cols=76  Identities=18%  Similarity=0.291  Sum_probs=50.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEE-EecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +++++|+||+||+|...++..-..|+++++ ++.+++...++..+++..    ...|.++++ ..+.++++..  .++|+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad----~vi~~~~~~-~~~~~~~~~~--~GvDv  103 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD----AAVNYKTGN-VAEQLREACP--GGVDV  103 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS----EEEETTSSC-HHHHHHHHCT--TCEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce----EEeeccchh-HHHHHHHHhc--cCceE
Confidence            478999999999999988887778986554 566666666677666543    223544433 3333333321  36999


Q ss_pred             EEEc
Q 025252          105 LVNS  108 (255)
Q Consensus       105 li~~  108 (255)
                      ++.+
T Consensus       104 v~D~  107 (187)
T d1vj1a2         104 YFDN  107 (187)
T ss_dssp             EEES
T ss_pred             EEec
Confidence            9985

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.83  E-value=0.0059  Score=43.26  Aligned_cols=107  Identities=20%  Similarity=0.210  Sum_probs=58.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.|+|+ |.+|.+++..++.++.  ++++.+++++..+.....+.+     ........|   +++           ..
T Consensus         3 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   67 (142)
T d1y6ja1           3 KVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YSD-----------VK   67 (142)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GGG-----------GT
T ss_pred             eEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HHH-----------hC
Confidence            4677797 9999999999999874  899999988765444444432     122222221   221           23


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      .-|++|..||.....      ..+..   ..++.|..-.    +.+.+.+.+ .+++.++++|
T Consensus        68 ~adivvitag~~~~~------~~~r~---~l~~~N~~i~----~~i~~~i~~~~p~ai~ivvt  117 (142)
T d1y6ja1          68 DCDVIVVTAGANRKP------GETRL---DLAKKNVMIA----KEVTQNIMKYYNHGVILVVS  117 (142)
T ss_dssp             TCSEEEECCCC------------CHH---HHHHHHHHHH----HHHHHHHHHHCCSCEEEECS
T ss_pred             CCceEEEecccccCc------Ccchh---HHhhHHHHHH----HHHHHHhhccCCCceEEEec
Confidence            579999877644311      12332   3345555444    444444433 3567777777

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.83  E-value=0.0042  Score=44.35  Aligned_cols=111  Identities=19%  Similarity=0.192  Sum_probs=64.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhC------CCceEEEEeeCCCHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLG------HQDVCYIHCDVSNEREVINLVDTTV   96 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   96 (255)
                      .++++.|+|+ |.+|..++..++..|.  ++++.+++++..+.....+.      ...+.....|   .++         
T Consensus         5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d---~~~---------   71 (148)
T d1ldna1           5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGD---YDD---------   71 (148)
T ss_dssp             TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECC---GGG---------
T ss_pred             CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECC---HHH---------
Confidence            4567888997 9999999999999874  89999998876444333332      1233333333   221         


Q ss_pred             HHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           97 AKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        97 ~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                        ...-|++|..++.....+      .+..+   .+..|..-.-.+.+.+.++   .+.+.++++|
T Consensus        72 --l~daDvvvitag~~~~~~------~~R~d---l~~~N~~i~~~i~~~i~~~---~p~a~~ivvt  123 (148)
T d1ldna1          72 --CRDADLVVICAGANQKPG------ETRLD---LVDKNIAIFRSIVESVMAS---GFQGLFLVAT  123 (148)
T ss_dssp             --TTTCSEEEECCSCCCCTT------TCSGG---GHHHHHHHHHHHHHHHHHH---TCCSEEEECS
T ss_pred             --hccceeEEEecccccccC------cchhH---HHHHHHHHHHHHHHHHHhh---CCCceEEEec
Confidence              125699998776543221      22222   2233433333334444333   3567777777

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.77  E-value=0.0021  Score=47.16  Aligned_cols=78  Identities=15%  Similarity=0.248  Sum_probs=50.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .|.+++|.|+ +|+|...+..+...|. +|+++++++++.+... ++...  ..+  |..+ .+.+.+..+...  .+++
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~--~~i--~~~~~~~~~~~~~~~~~--~~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGAT--ECV--NPQDYKKPIQEVLTEMS--NGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCS--EEE--CGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCe--eEE--ecCCchhHHHHHHHHHh--cCCC
Confidence            5778999999 6899999999999885 7888888888765444 43322  111  2211 222333333332  2579


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus       100 D~vid~~G  107 (176)
T d2jhfa2         100 DFSFEVIG  107 (176)
T ss_dssp             SEEEECSC
T ss_pred             CEEEecCC
Confidence            99998643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.76  E-value=0.016  Score=41.04  Aligned_cols=111  Identities=21%  Similarity=0.199  Sum_probs=62.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHc---CCEEEEEecCcchHHHHHHHhCCC---ceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           28 VAIITGGASGIGASAAQLFHKN---GAKVVIADVQDNLGQALADKLGHQ---DVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~---g~~v~~~~r~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.|+|++|.+|.+++..|+.+   +.++++.+..+....+ ...+.+.   ........-.+.+.+           ..
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~-a~Dl~h~~~~~~~~~~~~~~~~~~~-----------~~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGV-AVDLSHIPTAVKIKGFSGEDATPAL-----------EG   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHH-HHHHHTSCSSCEEEEECSSCCHHHH-----------TT
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhH-HHHHHCCccccCCcEEEcCCCcccc-----------CC
Confidence            5889999999999999988643   4789999986543222 2233221   111112223333322           15


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      -|++|..||....+      ..+..++   ++.|..-.-.+.+.+.++   .+++.++++|
T Consensus        70 aDvvvitaG~~~k~------g~~R~dl---~~~N~~i~~~v~~~i~~~---~p~aivivvt  118 (145)
T d2cmda1          70 ADVVLISAGVRRKP------GMDRSDL---FNVNAGIVKNLVQQVAKT---CPKACIGIIT  118 (145)
T ss_dssp             CSEEEECCSCCCCT------TCCGGGG---HHHHHHHHHHHHHHHHHH---CTTSEEEECS
T ss_pred             CCEEEECCCccCCC------CcchhhH---HHHHHHHHHHHHHHHHhh---CCCcEEEEcc
Confidence            69999987754322      2244333   445544443444444433   3457777777

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.72  E-value=0.007  Score=43.73  Aligned_cols=116  Identities=14%  Similarity=0.095  Sum_probs=69.2

Q ss_pred             cceeeecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHH
Q 025252           19 SSYYRLQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVIN   90 (255)
Q Consensus        19 ~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~   90 (255)
                      +....++++++.|.|+ |.+|.+++..++.+|.  ++++.+++++..+.....+.+      ........|   ++++  
T Consensus        13 ~~~~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d---~~~~--   86 (160)
T d1i0za1          13 EEEATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKD---YSVT--   86 (160)
T ss_dssp             CSCCCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSS---GGGG--
T ss_pred             cccccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccc---hhhc--
Confidence            3344566778999996 8999999999999985  899999987665443333221      122212222   2221  


Q ss_pred             HHHHHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252           91 LVDTTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus        91 ~~~~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                               ..-|++|..||....+      ..+..   +.++.|..    +.+.+.+.+.+ ..++.++++|
T Consensus        87 ---------~~adiVVitAg~~~~~------g~tR~---~l~~~N~~----i~~~i~~~i~~~~p~aiiivvt  137 (160)
T d1i0za1          87 ---------ANSKIVVVTAGVRQQE------GESRL---NLVQRNVN----VFKFIIPQIVKYSPDCIIIVVS  137 (160)
T ss_dssp             ---------TTCSEEEECCSCCCCT------TCCGG---GGHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             ---------ccccEEEEecCCcccc------CcchH---HHHHHHHH----HHHHHHHHHHhcCCCcEEEEeC
Confidence                     2569999987654321      23333   23333444    44555555544 3467788877

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.70  E-value=0.0069  Score=43.45  Aligned_cols=112  Identities=15%  Similarity=0.088  Sum_probs=60.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC---------EEEEEecCcchHHHHHHHhCC---CceEEEEeeCCCHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA---------KVVIADVQDNLGQALADKLGH---QDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~---------~v~~~~r~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      .++.|+||+|.+|..++..|+..+.         +++...++.+..+....++..   .....+...-.+++.       
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------   77 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVA-------   77 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHH-------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhh-------
Confidence            3699999999999999999988652         122223333444443333322   233333333222222       


Q ss_pred             HHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-C-CCcEEEec
Q 025252           95 TVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-R-RGCILYTT  162 (255)
Q Consensus        95 ~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~~~ii~is  162 (255)
                          +..-|++|..||....      ...+.+++   ++.|+.-    ++.+.+.+.+. + .+.|+.+|
T Consensus        78 ----~~~advViitaG~~~~------pg~~r~dl---~~~N~~i----~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          78 ----FKDADYALLVGAAPRK------AGMERRDL---LQVNGKI----FTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ----TTTCSEEEECCCCCCC------TTCCHHHH---HHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred             ----cccccEEEeecCcCCC------CCCcHHHH---HHHHHHH----HHHHHHHHHHhCCCCcEEEEec
Confidence                2367999998765432      22344444   3444444    45555555442 3 45566666

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=96.69  E-value=0.0032  Score=46.15  Aligned_cols=76  Identities=16%  Similarity=0.204  Sum_probs=48.2

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEE-EEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc-CCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVV-IADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF-GKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~-~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~i  102 (255)
                      .+.+++|.|+ |++|...+..+...|++++ ++++++++++. .++++..  .+  .|.++.+ ..   +++++.. +++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~-a~~~Ga~--~~--i~~~~~~-~~---~~i~~~t~gg~   97 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLEL-AKQLGAT--HV--INSKTQD-PV---AAIKEITDGGV   97 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHH-HHHHTCS--EE--EETTTSC-HH---HHHHHHTTSCE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHH-HHHcCCe--EE--EeCCCcC-HH---HHHHHHcCCCC
Confidence            5778999987 8999999988888888655 55666655544 4455432  22  3444432 32   3333332 579


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus        98 D~vid~~G  105 (174)
T d1f8fa2          98 NFALESTG  105 (174)
T ss_dssp             EEEEECSC
T ss_pred             cEEEEcCC
Confidence            99998644

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.68  E-value=0.0059  Score=44.32  Aligned_cols=73  Identities=25%  Similarity=0.395  Sum_probs=51.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .|.+++|.|+ |++|...++.+...|++++++++++++.+ ...++....+    .|..+++....       ..+++|+
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~-~a~~lGad~~----i~~~~~~~~~~-------~~~~~D~   96 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKALGADEV----VNSRNADEMAA-------HLKSFDF   96 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHHHTCSEE----EETTCHHHHHT-------TTTCEEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHH-HHhccCCcEE----EECchhhHHHH-------hcCCCce
Confidence            5788999986 89999999888889999999999888654 4455553322    46555553321       2247999


Q ss_pred             EEEcCC
Q 025252          105 LVNSGC  110 (255)
Q Consensus       105 li~~a~  110 (255)
                      ++.+.+
T Consensus        97 vid~~g  102 (168)
T d1uufa2          97 ILNTVA  102 (168)
T ss_dssp             EEECCS
T ss_pred             eeeeee
Confidence            998644

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.67  E-value=0.0011  Score=48.70  Aligned_cols=45  Identities=22%  Similarity=0.392  Sum_probs=37.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      .+.+++|+||+||.|...++.....|++|+.+.+++++.+.+.+.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~l   67 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQL   67 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhh
Confidence            455799999999999998887777899999999998876665543

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.66  E-value=0.0014  Score=48.43  Aligned_cols=43  Identities=30%  Similarity=0.501  Sum_probs=36.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      .+.+++|+||+||+|...++.....|++|+.+++++++.+.+.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~   73 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence            3457999999999999988888889999999999888765554

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=96.61  E-value=0.00094  Score=43.83  Aligned_cols=38  Identities=24%  Similarity=0.343  Sum_probs=34.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +++||+++|.|. |..|+++|+.|.+.|++|.+.+.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            578999999999 67899999999999999999998654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.55  E-value=0.0021  Score=47.31  Aligned_cols=76  Identities=14%  Similarity=0.135  Sum_probs=49.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHc--CC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKF--GK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~  101 (255)
                      .|.+++|.|+ |++|...++.....|+ +|+++++++++.+.. ++++..  ++  +|.++.+..    +++.+..  .+
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~--~~--i~~~~~~~~----~~v~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGAT--DI--LNYKNGHIE----DQVMKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCS--EE--ECGGGSCHH----HHHHHHTTTSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHH-HhhCcc--cc--ccccchhHH----HHHHHHhhccC
Confidence            4667999986 8999999888888897 688899888765544 445422  12  243332222    2333332  25


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|++|.+.+
T Consensus        97 ~D~vid~~g  105 (174)
T d1jqba2          97 VDRVIMAGG  105 (174)
T ss_dssp             EEEEEECSS
T ss_pred             cceEEEccC
Confidence            999998654

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.54  E-value=0.043  Score=39.99  Aligned_cols=113  Identities=11%  Similarity=0.041  Sum_probs=60.2

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCcch--HHHHHHHhCC---CceEEEEeeCCCHHHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQDNL--GQALADKLGH---QDVCYIHCDVSNEREVINLVD   93 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~~~--~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~   93 (255)
                      .-++.||||+|.||.+++..|++...       .+.+.+.....  ++...-++..   .....+..- ++..       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~-------   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY-------   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch-------
Confidence            33699999999999999999987432       45666655432  2333322221   122222211 1211       


Q ss_pred             HHHHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-C-CCcEEEec
Q 025252           94 TTVAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-R-RGCILYTT  162 (255)
Q Consensus        94 ~~~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~-~~~ii~is  162 (255)
                         +.+...|++|..||....      ...+.++   .++.|..-    .+...+.+.+. + ...|+.+|
T Consensus        96 ---~~~~~aDvVvi~ag~~rk------pg~tR~D---ll~~N~~I----~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRG------PGMERAA---LLDINGQI----FADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCC------TTCCHHH---HHHHHHHH----HHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hhccCCceEEEeeccCCC------CCCcHHH---HHHHHHHH----HHHHHHHHHhhCCCCcEEEEec
Confidence               122478999987765432      2234444   34445444    44444444432 3 35566665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.49  E-value=0.014  Score=41.96  Aligned_cols=76  Identities=12%  Similarity=0.194  Sum_probs=52.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh------------CCCceEEEEeeCCCHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL------------GHQDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++.|.|. |-+|.++|+.|.+.|++|++.+|+++..++..+..            .+..+.++   ....+.++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIil---avp~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFL---CTPIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEE---CSCHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccc---cCcHhhhhhhhhhh
Confidence            4677766 89999999999999999999999987766554431            11123222   22367788888888


Q ss_pred             HHHcCCccEEEE
Q 025252           96 VAKFGKLDILVN  107 (255)
Q Consensus        96 ~~~~g~id~li~  107 (255)
                      .....+=.++++
T Consensus        78 ~~~l~~~~iv~~   89 (165)
T d2f1ka2          78 IPHLSPTAIVTD   89 (165)
T ss_dssp             GGGSCTTCEEEE
T ss_pred             hhhcccccceee
Confidence            665444345555

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.44  E-value=0.011  Score=42.02  Aligned_cols=112  Identities=13%  Similarity=0.127  Sum_probs=62.2

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhC------CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLG------HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      |++.|+|+ |.+|.+++..++.+|  .++++.+.++++.+.....+.      .........|   .+++          
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~l----------   67 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAAL----------   67 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGGG----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHHh----------
Confidence            56788895 899999999999987  489999998876443332221      1122333323   3222          


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is  162 (255)
                       ..-|++|..||......    .....+. .+.++.|.    .+.+.+.+.+++. +.+.++++|
T Consensus        68 -~~adiVVitaG~~~~~~----~~~g~~R-~~l~~~N~----~i~~~i~~~i~~~~p~aivivvt  122 (146)
T d1hyha1          68 -ADADVVISTLGNIKLQQ----DNPTGDR-FAELKFTS----SMVQSVGTNLKESGFHGVLVVIS  122 (146)
T ss_dssp             -TTCSEEEECCSCGGGTC------------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             -ccccEEEEecccccccc----ccCCccH-HHHHHHHH----HHHHHHHHHHhhcCCCeEEEEec
Confidence             25699998776543110    0111111 12233343    3445555554433 467777777

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.43  E-value=0.0069  Score=44.45  Aligned_cols=78  Identities=12%  Similarity=0.208  Sum_probs=50.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH-HHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE-VINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~i  102 (255)
                      .|.+++|+|+ ||+|...+..+...| .+|+++++++++++...+ ++...  ++  |.++.+. .+...+..  ..+++
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~-~GA~~--~i--n~~~~~~~~~~~~~~~--~g~G~  100 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATE--CI--SPKDSTKPISEVLSEM--TGNNV  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-HTCSE--EE--CGGGCSSCHHHHHHHH--HTSCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHh-cCCcE--EE--CccccchHHHHHHHHh--ccccc
Confidence            5778999986 899999999999999 589999999988765444 44221  22  2222221 22222221  12479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus       101 d~vi~~~g  108 (176)
T d1d1ta2         101 GYTFEVIG  108 (176)
T ss_dssp             CEEEECSC
T ss_pred             eEEEEeCC
Confidence            99998543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.43  E-value=0.0062  Score=44.64  Aligned_cols=78  Identities=19%  Similarity=0.301  Sum_probs=50.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCC-HHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSN-EREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~i  102 (255)
                      .|.+++|.|+ |++|...+..+...|+ +|++++.+++++ +..++++...+  +  |..+ .+..+...+..  ..+++
T Consensus        28 ~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~-~~a~~~Ga~~~--i--~~~~~~~~~~~~~~~~--~~~G~   99 (174)
T d1e3ia2          28 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAKALGATDC--L--NPRELDKPVQDVITEL--TAGGV   99 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHHTTCSEE--E--CGGGCSSCHHHHHHHH--HTSCB
T ss_pred             CCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHH-HHHHHhCCCcc--c--CCccchhhhhhhHhhh--hcCCC
Confidence            5678999975 9999999999998998 577778877765 55555553222  2  2211 12233333332  23589


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.|
T Consensus       100 d~vie~~G  107 (174)
T d1e3ia2         100 DYSLDCAG  107 (174)
T ss_dssp             SEEEESSC
T ss_pred             cEEEEecc
Confidence            99998754

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.40  E-value=0.0016  Score=46.63  Aligned_cols=42  Identities=17%  Similarity=0.347  Sum_probs=37.4

Q ss_pred             CccceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           17 TLSSYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        17 ~~~~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      .+|-.++++||+++|+|| |.+|..-++.|++.|++|.+++..
T Consensus         4 ~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           4 SLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             cchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            467778899999999999 569999999999999999998754

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.39  E-value=0.0098  Score=43.50  Aligned_cols=81  Identities=14%  Similarity=0.091  Sum_probs=59.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC-----------------CceEEEEeeCCCHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH-----------------QDVCYIHCDVSNEREVI   89 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~~   89 (255)
                      +.|-+.|- |-+|.++|++|++.|++|++.+|++++.+++.++...                 .....+...+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            44777887 7899999999999999999999999888777654211                 12344555667778888


Q ss_pred             HHHHHHHHHcCCccEEEEc
Q 025252           90 NLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~  108 (255)
                      ++.+.+.....+=+++|..
T Consensus        82 ~v~~~l~~~~~~g~iiid~  100 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDG  100 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEEC
T ss_pred             HHHHHHHhccccCcEEEec
Confidence            8888877765445677763

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.39  E-value=0.01  Score=42.75  Aligned_cols=45  Identities=31%  Similarity=0.406  Sum_probs=36.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      .+.+++|.|+ |++|...+..+...|++|+++++++++++... +++
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~G   71 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLG   71 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTT
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccC
Confidence            4778999886 99999999888889999999999988765544 444

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.32  E-value=0.0065  Score=42.21  Aligned_cols=68  Identities=19%  Similarity=0.270  Sum_probs=51.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEE-ecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIA-DVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~-~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      ++.|.|++|.+|+++++.+.++|.+++.. +++...      .+.  +.. +..|+|.++...+.++...++  ++.+++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~------~~~--~~D-VvIDFS~p~~~~~~l~~~~~~--~~p~Vi   70 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVE------ELD--SPD-VVIDFSSPEALPKTVDLCKKY--RAGLVL   70 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEE------ECS--CCS-EEEECSCGGGHHHHHHHHHHH--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHH------Hhc--cCC-EEEEecCHHHHHHHHHHHHhc--CCCEEE
Confidence            48999999999999999999999987754 443221      111  111 567999999999999988776  566666

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.25  E-value=0.0085  Score=43.61  Aligned_cols=78  Identities=18%  Similarity=0.236  Sum_probs=48.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCE-EEEEecCcchHHHHHHHhCCCceEEEEeeCC-CHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAK-VVIADVQDNLGQALADKLGHQDVCYIHCDVS-NEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~i  102 (255)
                      .|.+++|.|+ +|+|...+..+...|+. |+++++++++. +...+++...+  +  |.. +.+...+.+++..  .+++
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~-~~ak~lGa~~~--i--~~~~~~~~~~~~~~~~~--~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAKEFGATEC--I--NPQDFSKPIQEVLIEMT--DGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHHHHTCSEE--E--CGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHH-HHHHHhCCcEE--E--eCCchhhHHHHHHHHHc--CCCC
Confidence            5778999998 58999999999889964 55566666654 45556653322  2  222 1233333333331  2579


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.|
T Consensus       100 D~vid~~G  107 (176)
T d2fzwa2         100 DYSFECIG  107 (176)
T ss_dssp             SEEEECSC
T ss_pred             cEeeecCC
Confidence            99998643

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.25  E-value=0.0027  Score=46.74  Aligned_cols=46  Identities=24%  Similarity=0.410  Sum_probs=39.6

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL   70 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~   70 (255)
                      ++++|.++|.|+ ||.+++++..|.+.| +|.++.|+.++.+++.+++
T Consensus        15 ~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~   60 (177)
T d1nvta1          15 RVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI   60 (177)
T ss_dssp             CCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence            479999999988 689999999997766 9999999988887777655

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.25  E-value=0.029  Score=39.08  Aligned_cols=71  Identities=14%  Similarity=0.189  Sum_probs=49.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEE-EecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEE
Q 025252           28 VAIITGGASGIGASAAQLFHKN-GAKVVI-ADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDIL  105 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g~~v~~-~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l  105 (255)
                      ++.|+|++|.+|+++++...+. +.+++. +++... .......    +.. +..|+|.++...+.++...+.  ++-++
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~-~~~~~~~----~~D-vvIDFS~p~~~~~~~~~~~~~--~~~~V   72 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDP-LSLLTDG----NTE-VVIDFTHPDVVMGNLEFLIDN--GIHAV   72 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCC-THHHHTT----TCS-EEEECCCTTTHHHHHHHHHHT--TCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCc-hhhhccc----cCC-EEEEcccHHHHHHHHHHHHhc--CCCEE
Confidence            4889999999999999988764 566654 344332 2222221    111 668999999999998888765  56666


Q ss_pred             E
Q 025252          106 V  106 (255)
Q Consensus       106 i  106 (255)
                      +
T Consensus        73 i   73 (135)
T d1yl7a1          73 V   73 (135)
T ss_dssp             E
T ss_pred             E
Confidence            6

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=96.21  E-value=0.025  Score=39.82  Aligned_cols=109  Identities=18%  Similarity=0.255  Sum_probs=62.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      |++.|+|+ |.+|.++|..++..+ .++++.+.+++..+.....+..      ........  .|++++           
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~~-----------   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYADT-----------   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGGG-----------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHHh-----------
Confidence            56777896 999999999999887 4899999988765544433321      12222221  122221           


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      ..-|++|..||....+      ..+.   .+.++.|+    .+.+...+.+.+ .+++.++++|
T Consensus        68 ~~advvvitag~~~~~------~~~r---~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKP------GMSR---EDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             TTCSEEEECCSCC------------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             cCCCEEEEeeeccCCc------Ccch---hHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            2569999877654321      1122   22233443    355666666655 4567777766

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=96.20  E-value=0.0023  Score=46.22  Aligned_cols=36  Identities=14%  Similarity=-0.042  Sum_probs=32.0

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      +++.|.|+ |.+|..++..|++.|++|.+++|++...
T Consensus         1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            35889998 9999999999999999999999987643

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=96.19  E-value=0.0043  Score=45.44  Aligned_cols=43  Identities=16%  Similarity=0.221  Sum_probs=37.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      .|++.|.|+ |.+|.+++..|+++|++|.+.+|+++..+.+.+.
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~   43 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDR   43 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHc
Confidence            478999999 8899999999999999999999998877766554

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=96.18  E-value=0.003  Score=43.87  Aligned_cols=68  Identities=13%  Similarity=0.226  Sum_probs=50.8

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccEEE
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDILV  106 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li  106 (255)
                      |.++|.|. +.+|+.+++.|.  +.++++++.+++..+...+    ..+.++.+|.++++.++++      ...+-+.+|
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~----~~~~~i~Gd~~~~~~L~~a------~i~~A~~vi   67 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVLR----SGANFVHGDPTRVSDLEKA------NVRGARAVI   67 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHHH----TTCEEEESCTTSHHHHHHT------TCTTCSEEE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHHh----cCccccccccCCHHHHHHh------hhhcCcEEE
Confidence            45888886 779999999994  5678888888887665543    3678899999999877664      123566777


Q ss_pred             E
Q 025252          107 N  107 (255)
Q Consensus       107 ~  107 (255)
                      .
T Consensus        68 ~   68 (129)
T d2fy8a1          68 V   68 (129)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.13  E-value=0.0047  Score=46.15  Aligned_cols=42  Identities=24%  Similarity=0.361  Sum_probs=35.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      |++.|.|+ |-+|..+|..++..|++|++.+++++.+++..+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~   46 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKG   46 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhh
Confidence            67899999 6799999999999999999999998766655443

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.12  E-value=0.031  Score=39.18  Aligned_cols=107  Identities=21%  Similarity=0.196  Sum_probs=62.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.|.|+ |.+|.+++..++.++  .++++.+.+++..+.....+..     ........|   .+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~~-----------~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YADL-----------K   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGGG-----------T
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHHh-----------c
Confidence            4777897 889999999999887  5899999987664443322211     233333323   2221           2


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      .-|++|..||.....      ..+..+   .+..|..    +.+...+.+.+ .+.+.++++|
T Consensus        67 ~adivvitag~~~~~------g~~r~d---l~~~N~~----I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP------GETRLQ---LLGRNAR----VMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCCS------SCCHHH---HHHHHHH----HHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccCC------Ccchhh---hhccccc----hHHHHHHHHHhcCCCcEEEEeC
Confidence            579999877654321      223333   2333433    34444444443 3567777777

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.10  E-value=0.056  Score=38.29  Aligned_cols=114  Identities=16%  Similarity=0.163  Sum_probs=63.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .++.|+|+ |.+|.+++..+...+ .++++.+++++..+.....+.+      .+......|  ++++           .
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~~-----------~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYDD-----------L   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--cccc-----------c
Confidence            45888896 899999998888776 5899999988765544433322      122222222  1221           1


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      ..-|++|..++....++.. ..+.+..   ..++.|..-    .+.+.+.+++ .+.+.++++|
T Consensus        70 ~~advvvitag~~~~~g~~-~~~~~R~---~l~~~N~~i----v~~i~~~i~~~~p~aivivvt  125 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKS-DKEWNRD---DLLPLNNKI----MIEIGGHIKKNCPNAFIIVVT  125 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCC-STTCCGG---GGHHHHHHH----HHHHHHHHHHHCTTSEEEECS
T ss_pred             CCCcEEEEecccccCCCCC-ccccchh---HHHHHHHHH----HHHHHHHHHhcCCCeEEEEec
Confidence            3679999887654432211 1111222   234445433    4444444433 3457777777

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.09  E-value=0.0061  Score=44.28  Aligned_cols=73  Identities=22%  Similarity=0.347  Sum_probs=48.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      .|.+++|.|+ |++|...++.+...|++|+++++++++.+.+. +++...  ++  |-.+..+.   .+   +..+.+|.
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~--~i--~~~~~~~~---~~---~~~~~~d~   94 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADH--YI--ATLEEGDW---GE---KYFDTFDL   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSE--EE--EGGGTSCH---HH---HSCSCEEE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcE--Ee--eccchHHH---HH---hhhcccce
Confidence            5778999987 89999988877788999999999988776554 444322  22  22221111   11   22357899


Q ss_pred             EEEcC
Q 025252          105 LVNSG  109 (255)
Q Consensus       105 li~~a  109 (255)
                      ++.+.
T Consensus        95 vi~~~   99 (168)
T d1piwa2          95 IVVCA   99 (168)
T ss_dssp             EEECC
T ss_pred             EEEEe
Confidence            88863

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.08  E-value=0.013  Score=42.13  Aligned_cols=79  Identities=13%  Similarity=0.105  Sum_probs=53.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---------CceEEEEeeCCCHHHHHHHH---HHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---------QDVCYIHCDVSNEREVINLV---DTT   95 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~---~~~   95 (255)
                      ++-|.|- |-+|.++|+.|++.|++|++.+|+++..+++.+....         .+...+..=+.+++.+++++   +.+
T Consensus         2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            3667766 7899999999999999999999998887776653211         13444455566677777765   233


Q ss_pred             HHHcCCccEEEE
Q 025252           96 VAKFGKLDILVN  107 (255)
Q Consensus        96 ~~~~g~id~li~  107 (255)
                      .....+=+++|.
T Consensus        81 ~~~~~~g~iiid   92 (161)
T d1vpda2          81 IEGAKPGTVLID   92 (161)
T ss_dssp             HHHCCTTCEEEE
T ss_pred             hhccCCCCEEEE
Confidence            333333355665

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.07  E-value=0.071  Score=37.26  Aligned_cols=109  Identities=16%  Similarity=0.135  Sum_probs=62.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |.+|.+++..++..|  .++++.+.+++..+.....+..      ........  ++++.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4778896 899999999999987  5899999998765443322211      12333222  22322           1


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ..-|++|..||....+      ..+..   ..++.|..-...+.+.+.++   .+.+.++++|
T Consensus        68 ~dadvvvitag~~~~~------g~~r~---~l~~~N~~i~~~i~~~i~~~---~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKP------GMTRE---DLLMKNAGIVKEVTDNIMKH---SKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCT------TCCHH---HHHHHHHHHHHHHHHHHHHH---CSSCEEEECC
T ss_pred             cCCeEEEEEEecCCCC------CCchH---HHHHHHHHHHHHHHHHhhcc---CCCeEEEEec
Confidence            3679999877654321      12332   23344444333344444332   3567777777

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=95.98  E-value=0.011  Score=43.23  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=49.8

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH-HHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE-VINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~i  102 (255)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++... ++....  +  .|.++.+. .++..+..  .-+++
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~--~--i~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATE--C--LNPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSE--E--ECGGGCSSCHHHHHHHH--TTSCB
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcE--E--EcCCCchhHHHHHHHHh--cCCCC
Confidence            5778999986 8999999999988996 6888888888765554 444221  2  23322221 22222221  12579


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |++|.+.+
T Consensus        99 d~vid~~g  106 (174)
T d1p0fa2          99 DYAVECAG  106 (174)
T ss_dssp             SEEEECSC
T ss_pred             cEEEEcCC
Confidence            99998643

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.88  E-value=0.027  Score=40.43  Aligned_cols=111  Identities=16%  Similarity=0.148  Sum_probs=64.5

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC------CceEEEEeeCCCHHHHHHHHHHH
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH------QDVCYIHCDVSNEREVINLVDTT   95 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~   95 (255)
                      ++..++.|+|+ |.+|..++..++..|.  ++++.+++++..+.....+.+      ........|   ++++       
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d---~~~~-------   85 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKD---YNVS-------   85 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESS---GGGG-------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccc---hhhh-------
Confidence            45567888896 9999999999999874  899999987665433333321      122222223   2221       


Q ss_pred             HHHcCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252           96 VAKFGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus        96 ~~~~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                          ..-|++|..||....++      .+..++   ++.|.    .+.+.+.+.+.+ ..++.++++|
T Consensus        86 ----~~adivvitag~~~~~~------~~R~dl---l~~N~----~i~~~i~~~i~~~~p~~ivivvt  136 (159)
T d2ldxa1          86 ----ANSKLVIITAGARMVSG------QTRLDL---LQRNV----AIMKAIVPGVIQNSPDCKIIVVT  136 (159)
T ss_dssp             ----TTEEEEEECCSCCCCTT------TCSSCT---THHHH----HHHHHHTTTHHHHSTTCEEEECS
T ss_pred             ----ccccEEEEecccccCCC------CCHHHH---HHHHH----HHHHHHHHHHhccCCCeEEEEeC
Confidence                36799998776544222      122211   22333    334555555443 4567777777

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=95.86  E-value=0.044  Score=38.49  Aligned_cols=108  Identities=16%  Similarity=0.129  Sum_probs=62.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCc--chHHHHHHHh----C-CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQD--NLGQALADKL----G-HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~--~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      ++.|+|++|.+|.+++..+..++.  ++++.+.+.  +..+.....+    . .........|   ++++          
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~---~~~~----------   68 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGG---YEDT----------   68 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECC---GGGG----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCC---HHHh----------
Confidence            588999999999999999999874  799988643  2222111111    1 2233333333   3221          


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCC-CCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPR-RRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~~~ii~is  162 (255)
                       ..-|++|..||....+      ..+..+   .++.|.    -+.+.+.+.+.+. .++.++++|
T Consensus        69 -~~aDiVvitaG~~~~~------g~~R~d---l~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          69 -AGSDVVVITAGIPRQP------GQTRID---LAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             -TTCSEEEECCCCCCCT------TCCHHH---HHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             -hhcCEEEEeccccccc------CCchhh---HHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence             2679999877654321      223333   334444    3456666666544 456777776

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.85  E-value=0.13  Score=37.17  Aligned_cols=72  Identities=11%  Similarity=0.063  Sum_probs=53.0

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---------------CceEEEEeeCCCHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---------------QDVCYIHCDVSNEREVI   89 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~~   89 (255)
                      .+++||..|.+.|  + .+..|+++|++|+.++.++...+.+.+..+.               ....++.+|..+.....
T Consensus        20 ~~~rvLd~GCG~G--~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~   96 (201)
T d1pjza_          20 PGARVLVPLCGKS--Q-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARD   96 (201)
T ss_dssp             TTCEEEETTTCCS--H-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHH
T ss_pred             CCCEEEEecCcCC--H-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccccc
Confidence            6778999999876  3 5678899999999999999988888776543               23467778877654321


Q ss_pred             HHHHHHHHHcCCccEEEEc
Q 025252           90 NLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        90 ~~~~~~~~~~g~id~li~~  108 (255)
                      .         +..|+++..
T Consensus        97 ~---------~~~D~i~~~  106 (201)
T d1pjza_          97 I---------GHCAAFYDR  106 (201)
T ss_dssp             H---------HSEEEEEEE
T ss_pred             c---------cceeEEEEE
Confidence            1         267887753

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=95.81  E-value=0.015  Score=42.20  Aligned_cols=77  Identities=21%  Similarity=0.292  Sum_probs=47.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+.+++|.|+ |++|...+..+...|+ .|+++++++++++.+. ++...  .++  |-++ +..++..+..  .-.++|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~--~~i--~~~~-~~~~~~~~~~--~~~g~d  102 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGAD--HVV--DARR-DPVKQVMELT--RGRGVN  102 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCS--EEE--ETTS-CHHHHHHHHT--TTCCEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccc--eee--cCcc-cHHHHHHHhh--CCCCce
Confidence            4678999886 9999999888877886 5666777776655444 44322  222  3322 2333333221  113699


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|.+.+
T Consensus       103 ~vid~~g  109 (172)
T d1h2ba2         103 VAMDFVG  109 (172)
T ss_dssp             EEEESSC
T ss_pred             EEEEecC
Confidence            9998654

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.75  E-value=0.08  Score=37.12  Aligned_cols=109  Identities=13%  Similarity=0.139  Sum_probs=62.0

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC-----CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH-----QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      ++.|+|+ |.+|.++|..++.+|.  ++++.++++++.+.....+.+     ........  .+.+++           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHHh-----------h
Confidence            4677797 9999999999999884  899999988764433222221     12222222  122221           2


Q ss_pred             CccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          101 KLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       101 ~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      .-|++|..||....      ...+..+   .++.|..-.-.+.+.+.++   ..++.++++|
T Consensus        69 daDvVVitaG~~~~------~g~~R~d---l~~~N~~i~~~i~~~i~~~---~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQK------PGQSRLE---LVGATVNILKAIMPNLVKV---APNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCC------TTCCHHH---HHHHHHHHHHHHHHHHHHH---CTTSEEEECC
T ss_pred             CCcEEEEecccccC------CCCchhh---hhhhhHHHHHHHHHHHHhh---CCCeEEEEeC
Confidence            46999998764431      1234433   3445554433344443332   3457777777

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=95.61  E-value=0.064  Score=38.62  Aligned_cols=77  Identities=26%  Similarity=0.254  Sum_probs=58.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      +.-+++|.|+ +--|++.++...+.|++|.+.|.+.+.++++.+.+.. ++.   .-.++++.+++.++       .-|+
T Consensus        31 ~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~-~~~---~~~~~~~~l~~~~~-------~aDi   98 (168)
T d1pjca1          31 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS-RVE---LLYSNSAEIETAVA-------EADL   98 (168)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG-GSE---EEECCHHHHHHHHH-------TCSE
T ss_pred             CCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcc-cce---eehhhhhhHHHhhc-------cCcE
Confidence            4567899998 5689999999999999999999999998888877653 333   33456777766555       5699


Q ss_pred             EEEcCCCcc
Q 025252          105 LVNSGCNLE  113 (255)
Q Consensus       105 li~~a~~~~  113 (255)
                      +|..+-..+
T Consensus        99 vI~aalipG  107 (168)
T d1pjca1          99 LIGAVLVPG  107 (168)
T ss_dssp             EEECCCCTT
T ss_pred             EEEeeecCC
Confidence            999765444

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.43  E-value=0.034  Score=39.77  Aligned_cols=43  Identities=28%  Similarity=0.335  Sum_probs=35.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      .+.+++|.|+ |++|...+..+...|++|+++++++++.+.+.+
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~   69 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE   69 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhh
Confidence            4678888875 889999988888899999999998887665544

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.41  E-value=0.06  Score=38.99  Aligned_cols=78  Identities=18%  Similarity=0.114  Sum_probs=52.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCC--------------------ceEEEEeeCCCHHHH
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQ--------------------DVCYIHCDVSNEREV   88 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~--------------------~~~~~~~D~~~~~~~   88 (255)
                      +-|.|- |-+|.+++++|++.|++|.+.+|++++.+++.++....                    ....+..-+.+...+
T Consensus         4 IGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (178)
T d1pgja2           4 VGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAAT   82 (178)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHH
T ss_pred             EEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchh
Confidence            556655 78999999999999999999999999888887664321                    112233333444555


Q ss_pred             HHHHHHHHHHcCCccEEEE
Q 025252           89 INLVDTTVAKFGKLDILVN  107 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li~  107 (255)
                      ...+.........=+++++
T Consensus        83 ~~~~~~~~~~~~~~~iii~  101 (178)
T d1pgja2          83 DSTIEQLKKVFEKGDILVD  101 (178)
T ss_dssp             HHHHHHHHHHCCTTCEEEE
T ss_pred             hhhhhhhhhhccccceecc
Confidence            5555655555444456665

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.40  E-value=0.065  Score=38.26  Aligned_cols=79  Identities=15%  Similarity=0.111  Sum_probs=51.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC---------CceEEEEeeCCCHHHHHHHHHH---H
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH---------QDVCYIHCDVSNEREVINLVDT---T   95 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~---~   95 (255)
                      ++-+.|- |-+|.++|++|+++|++|.+.+|+.++.+.+...-..         .....+..-+.+.+..+.++..   +
T Consensus         3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            4666765 7899999999999999999999998876665433211         1334455555666666666543   2


Q ss_pred             HHHcCCccEEEE
Q 025252           96 VAKFGKLDILVN  107 (255)
Q Consensus        96 ~~~~g~id~li~  107 (255)
                      .....+=+++|.
T Consensus        82 ~~~l~~g~iiid   93 (162)
T d3cuma2          82 LAHIAPGTLVLE   93 (162)
T ss_dssp             HHHSCTTCEEEE
T ss_pred             cccCCCCCEEEE
Confidence            232222346665

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=95.36  E-value=0.0069  Score=44.91  Aligned_cols=41  Identities=15%  Similarity=0.212  Sum_probs=34.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      |++.|.|+ |-+|+.+|..++..|++|++.+++++.+++..+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~   45 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLA   45 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhh
Confidence            34888998 779999999999999999999999877655443

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.19  E-value=0.062  Score=36.08  Aligned_cols=36  Identities=22%  Similarity=0.407  Sum_probs=32.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+..
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~i   57 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGEI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEeccee
Confidence            367999998 789999999999999999999988764

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.17  E-value=0.076  Score=39.40  Aligned_cols=39  Identities=28%  Similarity=0.381  Sum_probs=34.9

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      ..+.||++.|.|- |.||+.+++.+..-|.+|+..++...
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCcccc
Confidence            4689999999998 77999999999999999999987654

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=95.15  E-value=0.091  Score=38.79  Aligned_cols=78  Identities=15%  Similarity=0.130  Sum_probs=48.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .|.+++|.|+ |++|...+......|+ +|+++++++++++.+ .++..   ..+ .|-.+ +++.+.+.++- .-.++|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga---~~~-~~~~~-~~~~~~i~~~t-~g~g~D   96 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGF---EIA-DLSLD-TPLHEQIAALL-GEPEVD   96 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTC---EEE-ETTSS-SCHHHHHHHHH-SSSCEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccc---cEE-EeCCC-cCHHHHHHHHh-CCCCcE
Confidence            5778999986 8999888877767776 788888887766544 44432   211 23222 23333333321 123689


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      ++|.+.|
T Consensus        97 ~vid~vG  103 (195)
T d1kola2          97 CAVDAVG  103 (195)
T ss_dssp             EEEECCC
T ss_pred             EEEECcc
Confidence            9998754

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.12  E-value=0.11  Score=34.58  Aligned_cols=71  Identities=13%  Similarity=0.136  Sum_probs=54.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCCccE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  104 (255)
                      ...++.|.|| |=+|+-++....+.|+++++.+.+++.-...      ---.++.+|..|.+.+.++..+.     .+|+
T Consensus        10 ~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~~PA~~------va~~~i~~~~~d~~~l~~~~~~~-----~~Dv   77 (111)
T d1kjqa2          10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH------VAHRSHVINMLDGDALRRVVELE-----KPHY   77 (111)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG------GSSEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCCCchhh------cCCeEEECCCCCHHHHHHHHHhh-----CCce
Confidence            4457999997 5699999999999999999999876532110      01246789999999998887754     7899


Q ss_pred             EEE
Q 025252          105 LVN  107 (255)
Q Consensus       105 li~  107 (255)
                      +-.
T Consensus        78 iT~   80 (111)
T d1kjqa2          78 IVP   80 (111)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            864

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=95.10  E-value=0.17  Score=35.23  Aligned_cols=108  Identities=18%  Similarity=0.153  Sum_probs=61.3

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcchHHHHHHHhC------CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG--AKVVIADVQDNLGQALADKLG------HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      ++.|+|+ |.+|.+++..++.+|  .++++.+.+++..+.....+.      .........  .|+++           .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH-----------h
Confidence            5778896 999999999999887  479999998876443322221      112222221  11222           1


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcC-CCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVP-RRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~-~~~~~ii~is  162 (255)
                      ..-|++|..|+....+      ..+..+   .+..|.    .+.+...+.+++ .+.+.++++|
T Consensus        68 ~~adiVvitag~~~~~------g~~r~~---l~~~n~----~i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1ojua1          68 KGSEIIVVTAGLARKP------GMTRLD---LAHKNA----GIIKDIAKKIVENAPESKILVVT  118 (142)
T ss_dssp             TTCSEEEECCCCCCCS------SCCHHH---HHHHHH----HHHHHHHHHHHTTSTTCEEEECS
T ss_pred             ccccEEEEeccccCCC------CCchHH---HHHHhh----HHHHHHHHHHHhhCCCcEEEEec
Confidence            3569999877644321      223332   233343    344555555544 3456677776

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=95.03  E-value=0.07  Score=38.42  Aligned_cols=78  Identities=17%  Similarity=0.331  Sum_probs=47.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHH-HHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNERE-VINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~i  102 (255)
                      .+.+++|.|+ +|+|...+..+...|. +|+++++++++++... +++...  ++  |.++.++ .++..+..  .-+++
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~--~i--n~~~~~~~~~~~~~~~--~~~G~   99 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATD--FV--NPNDHSEPISQVLSKM--TNGGV   99 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCE--EE--CGGGCSSCHHHHHHHH--HTSCB
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcE--EE--cCCCcchhHHHHHHhh--ccCCc
Confidence            5678999986 6788888888888776 6777888877765544 454222  22  3222221 22222222  12479


Q ss_pred             cEEEEcCC
Q 025252          103 DILVNSGC  110 (255)
Q Consensus       103 d~li~~a~  110 (255)
                      |+++.+.|
T Consensus       100 d~vid~~G  107 (175)
T d1cdoa2         100 DFSLECVG  107 (175)
T ss_dssp             SEEEECSC
T ss_pred             ceeeeecC
Confidence            99998654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.026  Score=40.62  Aligned_cols=40  Identities=28%  Similarity=0.503  Sum_probs=35.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ..+.||+++|.|- |-+|+.+|+.+...|++|++++.++-.
T Consensus        20 ~~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~~   59 (163)
T d1li4a1          20 VMIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPIN   59 (163)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccch
Confidence            3479999999998 579999999999999999999998754

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.76  E-value=0.074  Score=35.68  Aligned_cols=35  Identities=20%  Similarity=0.267  Sum_probs=30.9

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      |.++|.|| |.+|.++|..|.+.|.+|.++.|.+..
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~~   56 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDAP   56 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecchh
Confidence            56888888 789999999999999999999987654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.73  E-value=0.024  Score=43.32  Aligned_cols=49  Identities=22%  Similarity=0.346  Sum_probs=41.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      -++.||+++|-|- |..|..+++.|.+.|++|++.+.+......+..+..
T Consensus        35 ~~l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g   83 (230)
T d1leha1          35 DSLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEG   83 (230)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcC
Confidence            3589999999887 779999999999999999999988877777766543

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.72  E-value=0.073  Score=36.11  Aligned_cols=36  Identities=25%  Similarity=0.479  Sum_probs=31.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |-||.++|..|++.|.+|.++.+.+..
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            367899998 789999999999999999999987654

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.70  E-value=0.027  Score=42.13  Aligned_cols=44  Identities=25%  Similarity=0.422  Sum_probs=37.5

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      +++||+++|-| .|.+|..+++.|.+.|++|++.+.+........
T Consensus        24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~   67 (201)
T d1c1da1          24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAV   67 (201)
T ss_dssp             CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred             CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHH
Confidence            58999999988 477999999999999999999998876655443

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.69  E-value=0.022  Score=41.37  Aligned_cols=38  Identities=32%  Similarity=0.471  Sum_probs=34.7

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      .+++||.++|.|-|.=.|+-++..|+++|+.|..+..+
T Consensus        25 ~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          25 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            46899999999999999999999999999999887654

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.63  E-value=0.031  Score=39.56  Aligned_cols=43  Identities=26%  Similarity=0.373  Sum_probs=36.5

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcchHHHHHHHhC
Q 025252           28 VAIITGGASGIGASAAQLFHKNG-AKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.+.|+ |-+|.++++.|.+.| ++|.+.+|+++..+++.++..
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~   45 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELG   45 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTC
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcc
Confidence            4677777 889999999999887 899999999988888877653

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=94.63  E-value=0.016  Score=42.88  Aligned_cols=42  Identities=17%  Similarity=0.314  Sum_probs=35.7

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADK   69 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~   69 (255)
                      +++.|.|+ |..|.++|..|++.|++|.+.+|+++..+++.+.
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~   49 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK   49 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc
Confidence            35889998 5699999999999999999999998877666543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=94.55  E-value=0.17  Score=35.70  Aligned_cols=47  Identities=19%  Similarity=0.217  Sum_probs=35.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHc--CCEEEEEe--cCcchHHHHHHHhCC
Q 025252           26 GRVAIITGGASGIGASAAQLFHKN--GAKVVIAD--VQDNLGQALADKLGH   72 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~--g~~v~~~~--r~~~~~~~~~~~~~~   72 (255)
                      .|++.|.|+||.||.....-+.+.  .++|+.++  ++-+.+.+...+++.
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~P   52 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNA   52 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTC
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhcc
Confidence            588999999999999988888764  46776653  444567777777764

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=94.51  E-value=0.24  Score=35.16  Aligned_cols=79  Identities=14%  Similarity=0.063  Sum_probs=51.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCcchHHHHHHHhCC------------CceEEEEeeCCCHHHHHHHH
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA--KVVIADVQDNLGQALADKLGH------------QDVCYIHCDVSNEREVINLV   92 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~~~~~~~~~~~~~------------~~~~~~~~D~~~~~~~~~~~   92 (255)
                      |++.|.|. |-+|.++|+.|.+.|+  +|+..+++++..+.+.+...-            .....+. =.+-++.+.+++
T Consensus         2 k~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIi-la~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVM-LSSPVRTFREIA   79 (171)
T ss_dssp             CEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEE-ECSCHHHHHHHH
T ss_pred             CEEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccc-ccCCchhhhhhh
Confidence            35888876 8999999999999985  788889988776665543210            0111111 123367788888


Q ss_pred             HHHHHHcCCccEEEE
Q 025252           93 DTTVAKFGKLDILVN  107 (255)
Q Consensus        93 ~~~~~~~g~id~li~  107 (255)
                      +++......=.+++.
T Consensus        80 ~~l~~~~~~~~ii~d   94 (171)
T d2g5ca2          80 KKLSYILSEDATVTD   94 (171)
T ss_dssp             HHHHHHSCTTCEEEE
T ss_pred             hhhhccccccccccc
Confidence            887766543345554

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.48  E-value=0.036  Score=37.80  Aligned_cols=37  Identities=32%  Similarity=0.487  Sum_probs=32.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ..|.++|.|| |.+|.++|..|++.|.+|.++.+.+..
T Consensus        29 ~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~~   65 (123)
T d1nhpa2          29 EVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDRP   65 (123)
T ss_dssp             TCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCcc
Confidence            4678888877 799999999999999999999887653

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=94.45  E-value=0.039  Score=39.75  Aligned_cols=43  Identities=12%  Similarity=0.121  Sum_probs=37.1

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQ   64 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~   64 (255)
                      .++.||+++|.|-|.-.|+.++..|.++|+.|.++......++
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~   75 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLR   75 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchhH
Confidence            3579999999999999999999999999999998876654443

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.40  E-value=0.19  Score=35.50  Aligned_cols=34  Identities=21%  Similarity=0.241  Sum_probs=26.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCC-------EEEEEecCc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGA-------KVVIADVQD   60 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~-------~v~~~~r~~   60 (255)
                      .++.|+||+|.+|.+++..|+..+.       .+++.+.++
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~   44 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITP   44 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCcc
Confidence            4699999999999999999987542       456666554

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.34  E-value=0.04  Score=37.47  Aligned_cols=37  Identities=27%  Similarity=0.346  Sum_probs=32.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      +|+++|.|| |.+|.++|..|.++|.+|.++.+.+..+
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~l   66 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRLM   66 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSTT
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccccc
Confidence            678999988 7899999999999999999999887643

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.33  E-value=0.039  Score=37.33  Aligned_cols=36  Identities=14%  Similarity=0.169  Sum_probs=31.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+..
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~i   57 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNRI   57 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhccc
Confidence            467899988 789999999999999999999987653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=94.29  E-value=0.036  Score=39.34  Aligned_cols=43  Identities=12%  Similarity=0.179  Sum_probs=36.6

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG   71 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~   71 (255)
                      ++.+.|+ |-+|.++++.|.+.|+++++.+|+.++.+++.++++
T Consensus         2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g   44 (152)
T d2ahra2           2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLA   44 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHT
T ss_pred             EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccc
Confidence            3666665 789999999999999999999999888888877764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.28  E-value=0.04  Score=39.92  Aligned_cols=44  Identities=23%  Similarity=0.293  Sum_probs=38.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA   65 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~   65 (255)
                      .++.||.++|.|-|.=.|+.++..|.++|+.|.++......+.+
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~   78 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDE   78 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHH
Confidence            35899999999999999999999999999999998876655443

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=94.14  E-value=0.036  Score=42.09  Aligned_cols=34  Identities=24%  Similarity=0.326  Sum_probs=30.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .|+|+|+|| |-.|.+.|..|+++|++|.+++|+.
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456999998 7899999999999999999999864

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=94.06  E-value=0.061  Score=36.46  Aligned_cols=35  Identities=29%  Similarity=0.270  Sum_probs=30.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +|.++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            467888888 78999999999999999999988754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=93.79  E-value=0.34  Score=35.15  Aligned_cols=45  Identities=18%  Similarity=0.141  Sum_probs=38.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL   70 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~   70 (255)
                      +.-.++|.|+ +-.|.+.++.....|++|.+.|.+.+.++++.+..
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~   72 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLG   72 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTT
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhh
Confidence            4457899998 56899999999999999999999999888887754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=93.75  E-value=0.2  Score=35.27  Aligned_cols=46  Identities=17%  Similarity=0.158  Sum_probs=35.1

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEE--ecCcchHHHHHHHhCC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIA--DVQDNLGQALADKLGH   72 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~--~r~~~~~~~~~~~~~~   72 (255)
                      |++.|.|+||.||.....-..+..  .+|+.+  .++-+.+.+.+.++.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~p   51 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSP   51 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCC
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhh
Confidence            579999999999999988887763  566654  4455667777777764

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.75  E-value=0.036  Score=42.83  Aligned_cols=34  Identities=18%  Similarity=0.292  Sum_probs=29.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      +|+|+|+|| |--|.+.|.+|+++|++|+++++++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            578999988 6789999999999999999998754

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.74  E-value=0.11  Score=35.17  Aligned_cols=36  Identities=14%  Similarity=0.400  Sum_probs=32.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.|.+..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            467999998 789999999999999999999987664

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.67  E-value=0.35  Score=35.23  Aligned_cols=40  Identities=23%  Similarity=0.300  Sum_probs=34.3

Q ss_pred             ceeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           20 SYYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        20 ~~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ....+.++++.|.|. |.||+.+++.+...|.+|+..++..
T Consensus        38 ~~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          38 GSFEARGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             -CCCSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             ccccccceEEEEeec-ccchhhhhhhcccccceEeeccccc
Confidence            345689999999976 7899999999999999999998764

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.56  E-value=0.061  Score=36.68  Aligned_cols=36  Identities=19%  Similarity=0.266  Sum_probs=31.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.|.+..
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~~   57 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDKV   57 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecccc
Confidence            367899998 679999999999999999999997654

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=93.55  E-value=0.055  Score=36.28  Aligned_cols=36  Identities=22%  Similarity=0.468  Sum_probs=31.1

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |.+|.++|..|.+.|.+|.++.+.+..
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~i   56 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARERI   56 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeeccc
Confidence            356888887 789999999999999999999887654

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=93.47  E-value=0.072  Score=35.96  Aligned_cols=36  Identities=19%  Similarity=0.325  Sum_probs=31.7

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .+.++|.|| |-||.++|..|++.|.+|.++.+.+..
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~l   57 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDKF   57 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeeccc
Confidence            466999998 789999999999999999999887653

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.45  E-value=0.059  Score=39.38  Aligned_cols=38  Identities=18%  Similarity=0.265  Sum_probs=33.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .++|.++|+|| |--|.+.|..|+++|++|.+.++++..
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~~   78 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSEI   78 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCcc
Confidence            46788999998 779999999999999999999987654

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.25  E-value=0.056  Score=39.41  Aligned_cols=34  Identities=21%  Similarity=0.305  Sum_probs=29.5

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +++.|.|+ |..|.++|..|+++|++|.+.+|..+
T Consensus         1 MkI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            35788888 78999999999999999999998544

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.23  E-value=0.13  Score=37.51  Aligned_cols=42  Identities=26%  Similarity=0.164  Sum_probs=36.1

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      ...+.+|++.|.|. |.||+++++.+...|.+|+..++.....
T Consensus        39 ~~~l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~   80 (184)
T d1ygya1          39 GTEIFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPA   80 (184)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHH
T ss_pred             cccccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChh
Confidence            44689999999996 7899999999999999999998876543

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.14  E-value=0.076  Score=36.05  Aligned_cols=32  Identities=16%  Similarity=0.209  Sum_probs=28.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           27 RVAIITGGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      |.++|.|| |-||.++|..|.+.|.+|.++.|+
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            45888888 789999999999999999999875

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=93.04  E-value=0.083  Score=37.75  Aligned_cols=40  Identities=23%  Similarity=0.478  Sum_probs=35.6

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .-+.||+++|.|- |-.|+.+|+++...|++|.++..++-.
T Consensus        19 ~~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          19 FLISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             ceecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCchh
Confidence            3478999999998 679999999999999999999988754

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.04  E-value=0.084  Score=35.48  Aligned_cols=37  Identities=22%  Similarity=0.429  Sum_probs=32.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .+|.++|.|| |-+|.++|..|++.|.+|.++.+.+..
T Consensus        21 ~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~~   57 (121)
T d1mo9a2          21 PGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEPL   57 (121)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccchh
Confidence            4678999888 789999999999999999999987654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=93.00  E-value=0.078  Score=38.74  Aligned_cols=38  Identities=21%  Similarity=0.255  Sum_probs=34.2

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .+.||++.|.|. |.||+.+++.+...|.+|...++...
T Consensus        39 ~l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~   76 (181)
T d1qp8a1          39 LIQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPK   76 (181)
T ss_dssp             CCTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             cccCceEEEecc-ccccccceeeeecccccccccccccc
Confidence            489999999999 45999999999999999999998754

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=92.98  E-value=0.1  Score=38.49  Aligned_cols=41  Identities=22%  Similarity=0.150  Sum_probs=35.8

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ...+.||++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        44 ~~eL~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   84 (193)
T d1mx3a1          44 AARIRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD   84 (193)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT
T ss_pred             ceeeeCceEEEecc-ccccccceeeeeccccceeeccCcccc
Confidence            35689999999987 789999999999999999999886553

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=92.89  E-value=0.089  Score=36.25  Aligned_cols=38  Identities=21%  Similarity=0.251  Sum_probs=33.1

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      .+|+++|.|| |.+|.++|..|.+.|.+|.++.+.+..+
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~l   71 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARVL   71 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSTT
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeeccccc
Confidence            4678999988 7899999999999999999999876543

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.53  E-value=0.058  Score=39.21  Aligned_cols=37  Identities=16%  Similarity=0.233  Sum_probs=31.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcch
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNL   62 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~   62 (255)
                      .+|+|+|.|| |-.|...|..|+++|+ +|.++.+....
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~~   40 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEYV   40 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCcc
Confidence            4677999998 7899999999999998 59898887554

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=92.43  E-value=0.083  Score=42.07  Aligned_cols=38  Identities=26%  Similarity=0.458  Sum_probs=32.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLG   63 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~   63 (255)
                      +.|+++|.|| |--|..+|..|++.|++|.++.++....
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~iG   38 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDHIG   38 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCCCc
Confidence            4688999998 6789999999999999999998876543

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=92.30  E-value=0.081  Score=40.66  Aligned_cols=31  Identities=23%  Similarity=0.401  Sum_probs=28.5

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++|+|| |-.|.++|.+|+++|.+|+++++.+
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            888888 7899999999999999999999875

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=92.27  E-value=0.079  Score=41.50  Aligned_cols=36  Identities=22%  Similarity=0.382  Sum_probs=31.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +.|+|+|+|| |--|.+.|..|+++|++|+++++++.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            5678999999 57899999999999999999987654

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.14  E-value=0.11  Score=35.36  Aligned_cols=36  Identities=22%  Similarity=0.445  Sum_probs=31.8

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |-||.++|..|.+.|.+|.++.+.+..
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~i   61 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDGL   61 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeeccc
Confidence            467999998 789999999999999999999887654

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.09  E-value=0.11  Score=38.48  Aligned_cols=40  Identities=23%  Similarity=0.201  Sum_probs=32.8

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      ++.|.|. |.+|..+|..|++.|++|+..+.+++..+.+.+
T Consensus         2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~   41 (202)
T d1mv8a2           2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ   41 (202)
T ss_dssp             EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred             EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc
Confidence            3677755 889999999999999999999998776655543

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=91.71  E-value=0.1  Score=38.67  Aligned_cols=39  Identities=31%  Similarity=0.329  Sum_probs=34.8

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      ..+.+|++.|.|. |.||+.+++.+..-|.+|+..++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4689999999998 67999999999999999999988654

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=91.70  E-value=0.12  Score=39.15  Aligned_cols=35  Identities=23%  Similarity=0.310  Sum_probs=30.0

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .++|+|+|| |--|..+|..|+++|.+|+++++++.
T Consensus         4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            456999998 67899999999999999999998643

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.69  E-value=0.68  Score=36.61  Aligned_cols=114  Identities=16%  Similarity=0.130  Sum_probs=64.5

Q ss_pred             ecCeEEEEecC-CChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGG-ASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGa-s~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      .+|++++=.++ +|+++.++    +..+.+|+.++.++...+.+.+..   +-.++.++..|..+.      .++.....
T Consensus       144 ~~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~~  213 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDL------LRRLEKEG  213 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHTT
T ss_pred             hCCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHH------hhhhHhhh
Confidence            46888885554 45555443    445678999999988766665443   225788888886432      22333333


Q ss_pred             CCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252          100 GKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus       100 g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      +.+|++|.+.-...     .    +..+....    ......+.+.+.+.++  ++|.+++.|
T Consensus       214 ~~fD~Vi~DpP~~~-----~----~~~~~~~~----~~~~~~l~~~a~~lLk--pGG~Lv~~s  261 (318)
T d1wxxa2         214 ERFDLVVLDPPAFA-----K----GKKDVERA----YRAYKEVNLRAIKLLK--EGGILATAS  261 (318)
T ss_dssp             CCEEEEEECCCCSC-----C----STTSHHHH----HHHHHHHHHHHHHTEE--EEEEEEEEE
T ss_pred             cCCCEEEEcCCccc-----c----chHHHHHH----HHHHHHHHHHHHHHcC--CCCEEEEEe
Confidence            57999997521111     0    11111111    1123346777777773  567776655

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=91.67  E-value=0.2  Score=35.07  Aligned_cols=40  Identities=18%  Similarity=0.175  Sum_probs=31.2

Q ss_pred             CeEEEE-ecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH
Q 025252           26 GRVAII-TGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA   65 (255)
Q Consensus        26 ~k~~lV-tGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~   65 (255)
                      ++.++| -.+++.||.++|..|++.|.+|.++.+.+.....
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~~~~   79 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYM   79 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTTHH
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCccccc
Confidence            444444 4466899999999999999999999987655443

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.26  E-value=0.15  Score=37.64  Aligned_cols=68  Identities=25%  Similarity=0.271  Sum_probs=48.9

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ++.||+++=.|+++|+ .+  -.++..|+ +|+.++.++...+.+.+..  .++.++.+|+.+.             .++
T Consensus        46 dl~Gk~VLDlGcGtG~-l~--i~a~~~ga~~V~~vDid~~a~~~ar~N~--~~~~~~~~D~~~l-------------~~~  107 (197)
T d1ne2a_          46 NIGGRSVIDAGTGNGI-LA--CGSYLLGAESVTAFDIDPDAIETAKRNC--GGVNFMVADVSEI-------------SGK  107 (197)
T ss_dssp             SSBTSEEEEETCTTCH-HH--HHHHHTTBSEEEEEESCHHHHHHHHHHC--TTSEEEECCGGGC-------------CCC
T ss_pred             CCCCCEEEEeCCCCcH-HH--HHHHHcCCCcccccccCHHHHHHHHHcc--ccccEEEEehhhc-------------CCc
Confidence            4689999999998873 23  33555664 6999999887766555543  4688899998532             258


Q ss_pred             ccEEEEc
Q 025252          102 LDILVNS  108 (255)
Q Consensus       102 id~li~~  108 (255)
                      +|++|.|
T Consensus       108 fD~Vi~N  114 (197)
T d1ne2a_         108 YDTWIMN  114 (197)
T ss_dssp             EEEEEEC
T ss_pred             ceEEEeC
Confidence            9999975

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=91.24  E-value=2.7  Score=32.99  Aligned_cols=74  Identities=11%  Similarity=0.126  Sum_probs=47.2

Q ss_pred             cCeEEE-EecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHh-----CCCceEEEEeeCCCHHHHHHHHHHHHH
Q 025252           25 QGRVAI-ITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKL-----GHQDVCYIHCDVSNEREVINLVDTTVA   97 (255)
Q Consensus        25 ~~k~~l-VtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~   97 (255)
                      +|++++ +..++|+++.+    .+..|+ +|+.++.++...+...+..     ...++.++..|+.      +.++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            577776 55566666654    334565 6899999987766555433     2247888998863      33344444


Q ss_pred             HcCCccEEEEc
Q 025252           98 KFGKLDILVNS  108 (255)
Q Consensus        98 ~~g~id~li~~  108 (255)
                      ...++|++|..
T Consensus       214 ~~~~fD~Ii~D  224 (317)
T d2b78a2         214 HHLTYDIIIID  224 (317)
T ss_dssp             TTCCEEEEEEC
T ss_pred             hcCCCCEEEEc
Confidence            44579999974

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=91.24  E-value=0.24  Score=35.31  Aligned_cols=76  Identities=13%  Similarity=0.190  Sum_probs=48.4

Q ss_pred             EEEEecCCChHHHHHHHHHHHc-CCEEEE-EecCcch--HHHHHHH-------------hC--CCceEEEEeeCCCHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKN-GAKVVI-ADVQDNL--GQALADK-------------LG--HQDVCYIHCDVSNEREV   88 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~-g~~v~~-~~r~~~~--~~~~~~~-------------~~--~~~~~~~~~D~~~~~~~   88 (255)
                      ++.|.|++|.+|+++++...+. +.+++. ++|....  ...+.+.             +.  ..... +..|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~D-ViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDFD-VFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSCS-EEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhcccc-eEEEeccHHHH
Confidence            5999999999999999999885 455543 2332211  0000000             00  01122 55899999999


Q ss_pred             HHHHHHHHHHcCCccEEE
Q 025252           89 INLVDTTVAKFGKLDILV  106 (255)
Q Consensus        89 ~~~~~~~~~~~g~id~li  106 (255)
                      .+.++...+.  ++.+++
T Consensus        85 ~~~~~~a~~~--~~~~Vi  100 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVI  100 (162)
T ss_dssp             HHHHHHHHHT--TCEEEE
T ss_pred             HHHHHHHHhc--cceeEE
Confidence            9998877665  677777

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=90.97  E-value=0.24  Score=34.62  Aligned_cols=39  Identities=13%  Similarity=0.044  Sum_probs=31.2

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      ++-|.|. |-+|.++++.|++.|++|+..+++........
T Consensus         2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   40 (152)
T d1i36a2           2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER   40 (152)
T ss_dssp             EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH
T ss_pred             EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh
Confidence            3666655 88999999999999999999888776554444

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=90.72  E-value=0.17  Score=35.76  Aligned_cols=35  Identities=26%  Similarity=0.461  Sum_probs=29.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCC--EEEEEecCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGA--KVVIADVQD   60 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~--~v~~~~r~~   60 (255)
                      .||+++|.|| |..|..+|..|.+.+.  +|+++++++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            3799999999 6789999999999874  788887664

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.69  E-value=0.19  Score=37.82  Aligned_cols=38  Identities=21%  Similarity=0.406  Sum_probs=32.8

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      -.+|.++|.|| |-.|...|..|+++|++|.+++++...
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~   84 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI   84 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence            36788999998 678999999999999999999877543

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=90.52  E-value=0.39  Score=35.08  Aligned_cols=41  Identities=17%  Similarity=0.080  Sum_probs=35.6

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ...+.+|++.|.|. |.||+.+++.+...|.+|+..++....
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   82 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRAS   82 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhccccccccccccc
Confidence            35688999999998 779999999999999999999876553

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=89.86  E-value=0.25  Score=38.81  Aligned_cols=42  Identities=19%  Similarity=0.319  Sum_probs=27.2

Q ss_pred             eEEEEecCCCh-H---HHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           27 RVAIITGGASG-I---GASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        27 k~~lVtGas~g-i---G~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      |+++|++|++| -   ..+++++|.++|++|..++.......++.+
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~~~~~~~~~~   46 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVP   46 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGG
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeCCcchhhccc
Confidence            45555555444 3   447999999999999887755444344443

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=89.84  E-value=0.16  Score=37.50  Aligned_cols=31  Identities=29%  Similarity=0.343  Sum_probs=28.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++|+|| |--|...|..|+++|.+|.++.+++
T Consensus         8 viViGa-G~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGT-GITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            789996 7889999999999999999998875

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.71  E-value=0.96  Score=31.45  Aligned_cols=77  Identities=12%  Similarity=0.130  Sum_probs=50.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--------CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--------QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +-+.|- |-+|.+++++|++.|+.+ +..|+.++..+..++...        .....+...+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            566676 789999999999888765 567777666665555432        1333444556667777777777665544


Q ss_pred             CccEEEE
Q 025252          101 KLDILVN  107 (255)
Q Consensus       101 ~id~li~  107 (255)
                      +-.++|.
T Consensus        81 ~~~~iid   87 (156)
T d2cvza2          81 EGTYWVD   87 (156)
T ss_dssp             TTEEEEE
T ss_pred             ccccccc
Confidence            4455565

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=89.48  E-value=0.35  Score=35.24  Aligned_cols=41  Identities=12%  Similarity=0.069  Sum_probs=35.5

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      ...+.++++.|.|. |.||+++++.+...|.+|...++....
T Consensus        39 ~~~l~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          39 AYDLEAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             ceeccccceeeccc-cccchhhhhhhhccCceEEEEeecccc
Confidence            34688999999997 779999999999999999999986543

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=89.47  E-value=1.5  Score=28.89  Aligned_cols=79  Identities=14%  Similarity=0.135  Sum_probs=52.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH-HHHHHHHHHHHHcCCccE
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER-EVINLVDTTVAKFGKLDI  104 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~id~  104 (255)
                      ||+++|.--...+-..+...|.+.|++|+....+....-+...+.   +...+.+|+.-++ +--++++++++....+-+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~---~~dliilD~~mp~~~G~e~~~~ir~~~~~~pv   77 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL---KPDIVTMDITMPEMNGIDAIKEIMKIDPNAKI   77 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CCSEEEEECSCGGGCHHHHHHHHHHHCTTCCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc---cCCEEEEecCCCCCCHHHHHHHHHHhCCCCcE
Confidence            688999999999999999999999999876555543333333332   3345555655432 334566777766666777


Q ss_pred             EEE
Q 025252          105 LVN  107 (255)
Q Consensus       105 li~  107 (255)
                      ++.
T Consensus        78 i~l   80 (118)
T d1u0sy_          78 IVC   80 (118)
T ss_dssp             EEE
T ss_pred             EEE
Confidence            765

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=89.39  E-value=0.11  Score=39.68  Aligned_cols=38  Identities=24%  Similarity=0.434  Sum_probs=32.6

Q ss_pred             eeeecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           21 YYRLQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        21 ~~~~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      +-++++++|+|.|+ ||+|..+++.|++.|. ++.++|.+
T Consensus        25 Q~kL~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          25 QEALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHHHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence            44688999999996 7899999999999995 78887654

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=89.15  E-value=2.9  Score=30.19  Aligned_cols=144  Identities=10%  Similarity=-0.009  Sum_probs=77.3

Q ss_pred             ecCeEEEEecCC--ChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGA--SGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas--~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ..++.+++....  .....+++..|...|..++.+.-...                     .+.+.+..    .....+.
T Consensus        23 ~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~---------------------~~~~~l~~----~~~~~~~   77 (209)
T d2fr1a2          23 LDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR---------------------CGRDELAE----RLRSVGE   77 (209)
T ss_dssp             CCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT---------------------CCHHHHHH----HHTTSCC
T ss_pred             CCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc---------------------cCHHHHHH----HhhccCC
Confidence            345544444332  34777888888888988876654322                     12222222    2233467


Q ss_pred             ccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEeccCCCcccccccCcCCCCCc
Q 025252          102 LDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTTGTGTTACTEIEGLCNIPAN  181 (255)
Q Consensus       102 id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is~~~~~~~~~~~~~~~~~~~  181 (255)
                      ++.+|+..+.....    ..  ..+.    ........+.++|.+..   .....++.+++.....   .....     .
T Consensus        78 ~~~vv~l~~~~~~~----~~--~~~~----~~~~~~~~l~l~qal~~---~~~~~~l~~vT~~a~~---~~~~d-----~  136 (209)
T d2fr1a2          78 VAGVLSLLAVDEAE----PE--EAPL----ALASLADTLSLVQAMVS---AELGCPLWTVTESAVA---TGPFE-----R  136 (209)
T ss_dssp             CSEEEECTTTTCCC----CS--SCGG----GCHHHHHHHHHHHHHHH---TTCCCCEEEEEESCSC---SSTTS-----C
T ss_pred             CCeEEEeCCCCCCC----Cc--chhH----HHHHHHHHHHHHHHHHh---CCCCCcEEEEEcCCcc---cCCCc-----c
Confidence            88888853222110    00  1111    11224455667776654   2334566666622111   11111     1


Q ss_pred             ccccchHHHHHHHHHHHHHhcccCcEEeEecc
Q 025252          182 YYGVSKFGILGLVKSLAAELGRYGIRVDCVSH  213 (255)
Q Consensus       182 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~p  213 (255)
                      .-....+++.+|.+.++.|+...-+++..+.+
T Consensus       137 ~~~p~~A~l~Gl~r~~~~E~P~l~~~~vDl~~  168 (209)
T d2fr1a2         137 VRNAAHGALWGVGRVIALENPAVWGGLVDVPA  168 (209)
T ss_dssp             CSCGGGHHHHHHHHHHHHHCGGGEEEEEEECT
T ss_pred             cCCHhHHhHHHHHHHHHHhCCCceEEEEECCC
Confidence            23567999999999999998776666666654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=89.05  E-value=0.2  Score=38.52  Aligned_cols=31  Identities=29%  Similarity=0.547  Sum_probs=27.8

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++|+|| |-.|.++|.+|+++|.+|+++++..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            788888 7789999999999999999998864

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=88.96  E-value=0.18  Score=38.32  Aligned_cols=38  Identities=26%  Similarity=0.394  Sum_probs=32.6

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA   67 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~   67 (255)
                      ++|+|| |.-|...|..++++|.+|+++++++....++.
T Consensus         7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~G~k~~   44 (253)
T d2gqfa1           7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKIGRKIL   44 (253)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHHHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCCCCceE
Confidence            888988 67889999999999999999999887666554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.88  E-value=2.4  Score=33.25  Aligned_cols=113  Identities=16%  Similarity=0.099  Sum_probs=63.8

Q ss_pred             cCeEEEEecCC-ChHHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC----CCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAIITGGA-SGIGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG----HQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~lVtGas-~giG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      .+++++=.++. |+++..+    +..|+ +|+.++.++...+...+...    ..++.++..|+.+      ........
T Consensus       145 ~g~~VLDl~~g~G~~si~~----a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIHA----AIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHHHH----HHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhhhh----hhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            37778766654 5555543    34564 79999999887666554332    1467788888632      22333334


Q ss_pred             cCCccEEEEcCCCccccCccCCCCCChHHHHHHHhhhhhhHHHHHHHHHHHhcCCCCCcEEEec
Q 025252           99 FGKLDILVNSGCNLEYRGFVSILDTPKSDLERLLAVNTIGGFLVAKHAARVMVPRRRGCILYTT  162 (255)
Q Consensus        99 ~g~id~li~~a~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~is  162 (255)
                      ..++|++|.+.-...         .+.......    ......+.+.+++.++  ++|.+++.|
T Consensus       215 ~~~fD~Vi~DpP~~~---------~~~~~~~~~----~~~y~~l~~~a~~ll~--pGG~lv~~s  263 (324)
T d2as0a2         215 GEKFDIVVLDPPAFV---------QHEKDLKAG----LRAYFNVNFAGLNLVK--DGGILVTCS  263 (324)
T ss_dssp             TCCEEEEEECCCCSC---------SSGGGHHHH----HHHHHHHHHHHHTTEE--EEEEEEEEE
T ss_pred             cCCCCchhcCCcccc---------CCHHHHHHH----HHHHHHHHHHHHHHcC--CCcEEEEEe
Confidence            458999997521111         112222211    1233446777777773  557777655

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=88.71  E-value=0.61  Score=29.89  Aligned_cols=40  Identities=18%  Similarity=0.298  Sum_probs=30.0

Q ss_pred             cCeEEEEecCCChHH-HHHHHHHHHcCCEEEEEecCcchHHH
Q 025252           25 QGRVAIITGGASGIG-ASAAQLFHKNGAKVVIADVQDNLGQA   65 (255)
Q Consensus        25 ~~k~~lVtGas~giG-~aia~~l~~~g~~v~~~~r~~~~~~~   65 (255)
                      +.|++.+.|-+ |+| .++|+.|.++|++|...|+......+
T Consensus         7 ~~~~ihfiGig-G~GMs~LA~~L~~~G~~VsGSD~~~~~~~~   47 (96)
T d1p3da1           7 RVQQIHFIGIG-GAGMSGIAEILLNEGYQISGSDIADGVVTQ   47 (96)
T ss_dssp             TCCEEEEETTT-STTHHHHHHHHHHHTCEEEEEESCCSHHHH
T ss_pred             hCCEEEEEEEC-HHHHHHHHHHHHhCCCEEEEEeCCCChhhh
Confidence            45668888774 455 56799999999999999987654333

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.58  E-value=0.42  Score=35.69  Aligned_cols=72  Identities=14%  Similarity=0.231  Sum_probs=51.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCC--------------------CceEEEEeeCCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGH--------------------QDVCYIHCDVSN   84 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~--------------------~~~~~~~~D~~~   84 (255)
                      .+++||..|.+.|  + .+..|+++|++|+.++.++...+.+.++.+.                    .++.++.+|+.+
T Consensus        45 ~~~rvLd~GCG~G--~-~a~~LA~~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~  121 (229)
T d2bzga1          45 SGLRVFFPLCGKA--V-EMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSIFD  121 (229)
T ss_dssp             CSCEEEETTCTTC--T-HHHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCGGG
T ss_pred             CCCEEEEeCCCCc--H-HHHHHHhCCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcchhh
Confidence            5678999999875  3 4788899999999999999888777665432                    357778888754


Q ss_pred             HHHHHHHHHHHHHHcCCccEEEEc
Q 025252           85 EREVINLVDTTVAKFGKLDILVNS  108 (255)
Q Consensus        85 ~~~~~~~~~~~~~~~g~id~li~~  108 (255)
                      ...         ...+.+|+++-.
T Consensus       122 l~~---------~~~~~fd~i~~~  136 (229)
T d2bzga1         122 LPR---------TNIGKFDMIWDR  136 (229)
T ss_dssp             GGG---------SCCCCEEEEEES
T ss_pred             ccc---------cccCceeEEEEE
Confidence            331         112467777654

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=88.32  E-value=0.23  Score=38.60  Aligned_cols=31  Identities=19%  Similarity=0.323  Sum_probs=27.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGA-KVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~   60 (255)
                      |+|+|| |-+|.++|.+|+++|. +|++++++.
T Consensus         4 ViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           4 IVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            888888 6899999999999996 699998763

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.14  E-value=0.33  Score=37.59  Aligned_cols=34  Identities=26%  Similarity=0.372  Sum_probs=28.5

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      .++|+|+|| |--|+..|..|+++|++|.++..+.
T Consensus         5 ~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           5 TGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             CCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            345999998 6789999999999999999986553

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=87.98  E-value=0.88  Score=29.92  Aligned_cols=36  Identities=28%  Similarity=0.375  Sum_probs=28.6

Q ss_pred             CeEEEEecCCChHHHHHHHHHHH---cCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~---~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |.+|.++|..|.+   .|.+|.++.|.+..
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~i   56 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDMI   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccccc
Confidence            367899998 7899999977655   48899999887654

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=87.96  E-value=0.38  Score=34.47  Aligned_cols=38  Identities=18%  Similarity=0.165  Sum_probs=25.4

Q ss_pred             eEEEEecCCChHH--HHHHHHHHHc----CCEEEEEecCcchHHH
Q 025252           27 RVAIITGGASGIG--ASAAQLFHKN----GAKVVIADVQDNLGQA   65 (255)
Q Consensus        27 k~~lVtGas~giG--~aia~~l~~~----g~~v~~~~r~~~~~~~   65 (255)
                      .++.|.|| |..|  .++...++..    +.++++.+.++++++.
T Consensus         3 mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~   46 (171)
T d1obba1           3 VKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDA   46 (171)
T ss_dssp             CEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHH
T ss_pred             cEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHH
Confidence            45888887 4455  4455555542    4699999999876554

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.92  E-value=1.1  Score=31.46  Aligned_cols=80  Identities=19%  Similarity=0.218  Sum_probs=53.3

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCC---CHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS---NEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~~g~  101 (255)
                      +|+.+.|.+.+||.|.-.+..+.+.|.++  ..-+++..+++.+.++.....--.+|++   +++...++++.+.+ ...
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~-d~~   78 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQ-DPN   78 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHH-STT
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHc-CCC
Confidence            57778888888999999999999888555  3445566677777766421111233443   45666777766554 367


Q ss_pred             ccEEEE
Q 025252          102 LDILVN  107 (255)
Q Consensus       102 id~li~  107 (255)
                      +|.++.
T Consensus        79 vd~v~v   84 (163)
T d2csua3          79 VDMLIA   84 (163)
T ss_dssp             CSEEEE
T ss_pred             cCEEEE
Confidence            897654

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.82  Score=35.78  Aligned_cols=72  Identities=22%  Similarity=0.307  Sum_probs=48.6

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecCcchHHH--HHHHh-CCCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQDNLGQA--LADKL-GHQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~~~~~--~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +++|+|+-.|+++|+   ++..+++.|+ +|+.++.++.....  ...+. ...++.++..|+.+...          ..
T Consensus        34 ~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------~~  100 (311)
T d2fyta1          34 FKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------PV  100 (311)
T ss_dssp             TTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------SC
T ss_pred             CCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------cc
Confidence            478999999999876   4566777886 78889888754321  12222 23578899998876431          12


Q ss_pred             CCccEEEEc
Q 025252          100 GKLDILVNS  108 (255)
Q Consensus       100 g~id~li~~  108 (255)
                      .++|+++..
T Consensus       101 ~~~D~Ivse  109 (311)
T d2fyta1         101 EKVDVIISE  109 (311)
T ss_dssp             SCEEEEEEC
T ss_pred             ccceEEEEe
Confidence            478999864

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.83  E-value=0.69  Score=36.13  Aligned_cols=27  Identities=22%  Similarity=0.193  Sum_probs=23.1

Q ss_pred             cCCChHHHHHHHHHHHcCCEEEEEecC
Q 025252           33 GGASGIGASAAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        33 Gas~giG~aia~~l~~~g~~v~~~~r~   59 (255)
                      -+||..|.++|+.+..+|++|+++.+.
T Consensus        43 ~SSGk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          43 FSSGRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCchHHHHHHHHHHHHcCCEEEEEecC
Confidence            346789999999999999999998654

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.20  E-value=1.3  Score=29.06  Aligned_cols=36  Identities=19%  Similarity=0.310  Sum_probs=27.9

Q ss_pred             CeEEEEecCCChHHHHHHHHHHH---cCCEEEEEecCcch
Q 025252           26 GRVAIITGGASGIGASAAQLFHK---NGAKVVIADVQDNL   62 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~---~g~~v~~~~r~~~~   62 (255)
                      .|.++|.|| |.+|.++|..|.+   +|.+|.++.+.+..
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~i   58 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEMI   58 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccchh
Confidence            467899998 8899999976655   45689999886554

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=86.65  E-value=0.33  Score=34.46  Aligned_cols=31  Identities=19%  Similarity=0.144  Sum_probs=25.7

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEE
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIA   56 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~   56 (255)
                      .++.++|.|| |.+|.++|..|.+.|.++.++
T Consensus         2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~   32 (185)
T d1q1ra1           2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIR   32 (185)
T ss_dssp             CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEE
T ss_pred             CCCCEEEECC-cHHHHHHHHHHHHcCCceEEE
Confidence            3667888888 789999999999999876554

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=86.61  E-value=0.26  Score=37.54  Aligned_cols=33  Identities=18%  Similarity=0.340  Sum_probs=28.9

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .|+|+|| |--|...|.+|+++|++|+++.+++.
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~   34 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR   34 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence            4889998 77899999999999999999987643

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=86.55  E-value=1.3  Score=27.75  Aligned_cols=41  Identities=22%  Similarity=0.218  Sum_probs=29.8

Q ss_pred             eEEEEecCCChHHH-HHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           27 RVAIITGGASGIGA-SAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        27 k~~lVtGas~giG~-aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      +++-+.|- +|+|- ++|+.|.++|+.|...|+.+....+..+
T Consensus         2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~   43 (89)
T d1j6ua1           2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR   43 (89)
T ss_dssp             CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH
T ss_pred             cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH
Confidence            44667766 55665 6799999999999999998755443333

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=86.52  E-value=0.25  Score=36.24  Aligned_cols=31  Identities=16%  Similarity=0.212  Sum_probs=27.0

Q ss_pred             eEEEEecCCChHHHH-----HHHHHHHcCCEEEEEe
Q 025252           27 RVAIITGGASGIGAS-----AAQLFHKNGAKVVIAD   57 (255)
Q Consensus        27 k~~lVtGas~giG~a-----ia~~l~~~g~~v~~~~   57 (255)
                      |++.|||-++|.|+.     +++.|+++|++|.+++
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            789999999899975     6778999999999976

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=86.14  E-value=1.2  Score=32.52  Aligned_cols=68  Identities=24%  Similarity=0.352  Sum_probs=46.8

Q ss_pred             ecCeEEEEecCCCh-HHHHHHHHHHHcCC-EEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHc
Q 025252           24 LQGRVAIITGGASG-IGASAAQLFHKNGA-KVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKF   99 (255)
Q Consensus        24 ~~~k~~lVtGas~g-iG~aia~~l~~~g~-~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   99 (255)
                      +.|++++=.|+++| ++.+    ++.+|+ +|+.++.++...+.+.+...  ..+..++..|+.+.             .
T Consensus        45 l~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-------------~  107 (201)
T d1wy7a1          45 IEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-------------N  107 (201)
T ss_dssp             STTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-------------C
T ss_pred             CCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-------------C
Confidence            67899998887765 4433    345674 89999999877666654433  24677788886432             2


Q ss_pred             CCccEEEEc
Q 025252          100 GKLDILVNS  108 (255)
Q Consensus       100 g~id~li~~  108 (255)
                      +++|++|.|
T Consensus       108 ~~fD~Vi~n  116 (201)
T d1wy7a1         108 SRVDIVIMN  116 (201)
T ss_dssp             CCCSEEEEC
T ss_pred             CcCcEEEEc
Confidence            589999975

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=86.08  E-value=2.5  Score=29.53  Aligned_cols=39  Identities=13%  Similarity=0.175  Sum_probs=24.3

Q ss_pred             EEEEecCCChHHHHHHHH-HHH-c----CCEEEEEecCcchHHHHH
Q 025252           28 VAIITGGASGIGASAAQL-FHK-N----GAKVVIADVQDNLGQALA   67 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~-l~~-~----g~~v~~~~r~~~~~~~~~   67 (255)
                      ++.|.||++ .|...+-. ++. .    ..++++.|.++++.+...
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~   46 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVV   46 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHH
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHH
Confidence            478888854 45444422 222 1    368999999988765443

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=85.69  E-value=1.3  Score=36.98  Aligned_cols=75  Identities=16%  Similarity=0.177  Sum_probs=50.2

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHH---HHhCCCceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALA---DKLGHQDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      +.||++.|.|+. ....++++.|.+.|.+|+.++..........   +.+...   .+..|-.|..++++.+++.     
T Consensus       343 l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~---~~i~~d~~~~el~~~i~~~-----  413 (477)
T d1m1na_         343 LEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDS---TLLYDDVTGYEFEEFVKRI-----  413 (477)
T ss_dssp             HTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTT---CEEEESCBHHHHHHHHHHH-----
T ss_pred             hcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCC---cEEecCCCHHHHHHHHHhc-----
Confidence            689998888764 5888999999889999988765433222222   222221   2234445677787777765     


Q ss_pred             CccEEEE
Q 025252          101 KLDILVN  107 (255)
Q Consensus       101 ~id~li~  107 (255)
                      ++|+++-
T Consensus       414 ~pDL~ig  420 (477)
T d1m1na_         414 KPDLIGS  420 (477)
T ss_dssp             CCSEEEE
T ss_pred             CCCEEEE
Confidence            8999985

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=85.65  E-value=1.4  Score=32.78  Aligned_cols=73  Identities=15%  Similarity=0.109  Sum_probs=50.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC-CCceEEEEeeCCCHHHHHHHHHHHHHHcCCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG-HQDVCYIHCDVSNEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id  103 (255)
                      .+.++|-.|+++|.-.++   |++.+.+|+.++.+++......+.+. ..++.++..|..+..          ...+++|
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~----------~~~~pfD  136 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY----------EEEKPYD  136 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC----------GGGCCEE
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhcccccccccCchhhcc----------hhhhhHH
Confidence            467899999998876554   44456789999998887666655544 357888888875311          1125789


Q ss_pred             EEEEcCC
Q 025252          104 ILVNSGC  110 (255)
Q Consensus       104 ~li~~a~  110 (255)
                      .++.+++
T Consensus       137 ~Iiv~~a  143 (224)
T d1vbfa_         137 RVVVWAT  143 (224)
T ss_dssp             EEEESSB
T ss_pred             HHHhhcc
Confidence            9887654

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=85.49  E-value=0.24  Score=32.45  Aligned_cols=39  Identities=10%  Similarity=0.192  Sum_probs=32.0

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      .+++||+++|.|++ --|..++..|+..+.+++...|...
T Consensus        28 ~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          28 ELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             GGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             hhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            45799999999995 6889999999998888777766543

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=85.43  E-value=2.2  Score=28.00  Aligned_cols=78  Identities=13%  Similarity=0.158  Sum_probs=52.3

Q ss_pred             CeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCC--CHHHHHHHHHHHHHHcCCcc
Q 025252           26 GRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVS--NEREVINLVDTTVAKFGKLD  103 (255)
Q Consensus        26 ~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~g~id  103 (255)
                      ||+++|+--...+-..+.+.|.+.|++|..+....+..+.+.+.    ....+-+|+.  +.+. -++++++++....+-
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal~~~~~~----~~dlillD~~mP~~~G-~el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKE----RPDLVLLDMKIPGMDG-IEILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHH----CCSEEEEESCCTTCCH-HHHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhC----CCCEEEEeccCCCCCH-HHHHHHHHHhCCCCc
Confidence            57899999999999999999989999998766544444444433    2334555555  4333 355667776655566


Q ss_pred             EEEEc
Q 025252          104 ILVNS  108 (255)
Q Consensus       104 ~li~~  108 (255)
                      +++..
T Consensus        76 vi~lt   80 (119)
T d1peya_          76 VIIMT   80 (119)
T ss_dssp             EEEEE
T ss_pred             EEEEe
Confidence            66653

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=85.25  E-value=0.48  Score=36.31  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=31.5

Q ss_pred             eeecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec
Q 025252           22 YRLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV   58 (255)
Q Consensus        22 ~~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r   58 (255)
                      .++++|+++|-|- |..|..+++.|.+.|++|+.++-
T Consensus        32 ~~l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          32 DTLVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             CCSTTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEec
Confidence            3579999999994 88999999999999999988753

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=85.15  E-value=0.57  Score=34.86  Aligned_cols=74  Identities=18%  Similarity=0.139  Sum_probs=54.4

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH---HhCCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD---KLGHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+.+++..|+++|.-.++..+++  |.+|+.++++++......+   +.+-.++.++.+|..+-.          ...++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~----------~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGF----------PPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCC----------cccCc
Confidence            46789999999999999988887  4679999998776554443   344578999999976421          22358


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      .|.++.+++
T Consensus       146 fD~Iiv~~a  154 (215)
T d1jg1a_         146 YDVIIVTAG  154 (215)
T ss_dssp             EEEEEECSB
T ss_pred             ceeEEeecc
Confidence            999887644

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=84.87  E-value=0.56  Score=35.03  Aligned_cols=36  Identities=33%  Similarity=0.479  Sum_probs=30.2

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHH
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQA   65 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~   65 (255)
                      ++|+|| |--|...|..|+++|.+|++++++......
T Consensus         5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~g~~   40 (251)
T d2i0za1           5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKLGRK   40 (251)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSSCHH
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCCCcc
Confidence            788988 578999999999999999999987654433

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=84.14  E-value=0.46  Score=37.08  Aligned_cols=34  Identities=26%  Similarity=0.373  Sum_probs=29.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcch
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNL   62 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~   62 (255)
                      -++|+|| |--|..+|++|++.|.+|.++.++...
T Consensus         3 dv~IIGa-G~sGl~~A~~L~~~g~~V~iiEk~~~i   36 (298)
T d1i8ta1           3 DYIIVGS-GLFGAVCANELKKLNKKVLVIEKRNHI   36 (298)
T ss_dssp             EEEEECC-SHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred             cEEEECC-cHHHHHHHHHHHhCCCcEEEEECCCCc
Confidence            3788988 788999999999999999999876543

>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: D-Alanine ligase N-terminal domain
domain: D-Ala-D-Ala ligase, N-domain
species: Escherichia coli, gene ddlB [TaxId: 562]

Probab=84.01  E-value=1.4  Score=28.04  Aligned_cols=38  Identities=21%  Similarity=0.411  Sum_probs=29.7

Q ss_pred             ecCeEEEEecCCCh-------HHHHHHHHHHHcCCEEEEEecCcc
Q 025252           24 LQGRVAIITGGASG-------IGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        24 ~~~k~~lVtGas~g-------iG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      |+.|.+++.||.+.       -|+++.+.|-+.|++|..++.+..
T Consensus         1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~~~~v~~i~~~~~   45 (96)
T d1iowa1           1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEV   45 (96)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred             CCceEEEEeCcCchhhHhHHhhHHHHHHHHHHcCeeEeeecCccc
Confidence            56788999999863       468888888888999988776543

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.80  E-value=1.6  Score=28.98  Aligned_cols=80  Identities=11%  Similarity=0.138  Sum_probs=53.4

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHH-HHHHHHHHHHHHcCCc
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNER-EVINLVDTTVAKFGKL  102 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~g~i  102 (255)
                      |+..+++|+--...+...+.+.|.+.|++|..+....+..+.+    .......+.+|+.-++ +-.++++++++.+..+
T Consensus         1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l----~~~~~dlii~D~~mp~~~G~el~~~l~~~~~~~   76 (123)
T d1krwa_           1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAAL----ASKTPDVLLSDIRMPGMDGLALLKQIKQRHPML   76 (123)
T ss_dssp             CCCCEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHHHHH----TTCCCSEEEECCSSSSSTTHHHHHHHHHHSSSC
T ss_pred             CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHH----HhCCCCEEEehhhcCCchHHHHHHHHHHhCCCC
Confidence            3455799999999999999999999999998766544433333    3345566666765431 2234566776665556


Q ss_pred             cEEEE
Q 025252          103 DILVN  107 (255)
Q Consensus       103 d~li~  107 (255)
                      -+++.
T Consensus        77 piI~~   81 (123)
T d1krwa_          77 PVIIM   81 (123)
T ss_dssp             CEEES
T ss_pred             eEEEE
Confidence            66664

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=83.68  E-value=1.4  Score=32.83  Aligned_cols=76  Identities=14%  Similarity=0.142  Sum_probs=53.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHc-C----CEEEEEecCcchHHHHHHHh--------CCCceEEEEeeCCCHHHHHHH
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKN-G----AKVVIADVQDNLGQALADKL--------GHQDVCYIHCDVSNEREVINL   91 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~-g----~~v~~~~r~~~~~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~   91 (255)
                      .+.++|..|+++|.-.++..+++.. |    .+|+.++++++..+...+.+        ...++.++..|..+-.     
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-----  154 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-----  154 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-----
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-----
Confidence            4678999999999999988888763 3    48999999887655443322        1247888898875311     


Q ss_pred             HHHHHHHcCCccEEEEcCC
Q 025252           92 VDTTVAKFGKLDILVNSGC  110 (255)
Q Consensus        92 ~~~~~~~~g~id~li~~a~  110 (255)
                           ...+++|.++..++
T Consensus       155 -----~~~~~fD~Iiv~~a  168 (223)
T d1r18a_         155 -----PPNAPYNAIHVGAA  168 (223)
T ss_dssp             -----GGGCSEEEEEECSC
T ss_pred             -----ccccceeeEEEEee
Confidence                 12357998887644

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=83.58  E-value=0.52  Score=36.05  Aligned_cols=37  Identities=19%  Similarity=0.263  Sum_probs=31.1

Q ss_pred             cCeEEEEecCCChHHHHH-----HHHHHHcCCEEEEEecCcc
Q 025252           25 QGRVAIITGGASGIGASA-----AQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        25 ~~k~~lVtGas~giG~ai-----a~~l~~~g~~v~~~~r~~~   61 (255)
                      .++.++|+.|=||.|+..     |..|+++|.+|++++.++.
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            566777777799999876     7899999999999998865

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.41  E-value=0.63  Score=34.39  Aligned_cols=35  Identities=29%  Similarity=0.478  Sum_probs=29.6

Q ss_pred             cCeEEEEecCCChHHHH-----HHHHHHHcCCEEEEEecC
Q 025252           25 QGRVAIITGGASGIGAS-----AAQLFHKNGAKVVIADVQ   59 (255)
Q Consensus        25 ~~k~~lVtGas~giG~a-----ia~~l~~~g~~v~~~~r~   59 (255)
                      ++|++.|+|+-||.|+.     +|..|++.|.+|++++-+
T Consensus         1 m~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           1 MGRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CCEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            47889999999998875     667888899999999865

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.09  E-value=0.92  Score=34.17  Aligned_cols=34  Identities=26%  Similarity=0.348  Sum_probs=28.8

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHH-cCCEEEEEe
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHK-NGAKVVIAD   57 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~-~g~~v~~~~   57 (255)
                      ++++++++|-| .|-.|..+++.|.+ .|+.|+.++
T Consensus        28 ~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          28 DPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            57899998887 58899999999975 599998765

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.99  E-value=0.53  Score=36.11  Aligned_cols=32  Identities=34%  Similarity=0.417  Sum_probs=28.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      |+|+||+ --|..+|..|++.|.+|+++++.++
T Consensus         5 V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           5 VAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             EEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             EEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            8899984 8999999999999999999998764

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=82.92  E-value=0.97  Score=33.74  Aligned_cols=70  Identities=14%  Similarity=0.136  Sum_probs=50.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCCc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGKL  102 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i  102 (255)
                      +++++|=.|+++|   .++..|++.|++|+.++.++...+.+.+..+  ..++.++..|+.+.+-           -+.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~~-----------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAF-----------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCC-----------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhccc-----------cccc
Confidence            4567999999876   3466788899999999999887766665543  2368889999765320           1468


Q ss_pred             cEEEEc
Q 025252          103 DILVNS  108 (255)
Q Consensus       103 d~li~~  108 (255)
                      |+++..
T Consensus       107 D~I~~~  112 (251)
T d1wzna1         107 DAVTMF  112 (251)
T ss_dssp             EEEEEC
T ss_pred             chHhhh
Confidence            988863

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.89  E-value=0.27  Score=40.85  Aligned_cols=35  Identities=17%  Similarity=0.401  Sum_probs=30.0

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCC-EEEEEecC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGA-KVVIADVQ   59 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~-~v~~~~r~   59 (255)
                      +++.+|+|.|+ ||+|.++++.|+..|. ++.++|.+
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            67778999999 6799999999999996 78887654

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=82.86  E-value=0.78  Score=34.76  Aligned_cols=35  Identities=29%  Similarity=0.433  Sum_probs=31.0

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV   58 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r   58 (255)
                      ++.||+++|-|- |..|..+++.|.+.|++|+.++-
T Consensus        28 ~l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD   62 (242)
T d1v9la1          28 GIEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSD   62 (242)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEEC
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeec
Confidence            579999999985 78999999999999999987653

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.76  E-value=0.64  Score=36.16  Aligned_cols=31  Identities=35%  Similarity=0.691  Sum_probs=27.0

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      |+|+|| |--|.+.|.+|+++|.+|+++.++.
T Consensus         2 ViVIGa-G~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGG-GISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            688888 5779999999999999999998754

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=82.56  E-value=0.65  Score=35.97  Aligned_cols=31  Identities=32%  Similarity=0.520  Sum_probs=27.9

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEecCc
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADVQD   60 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r~~   60 (255)
                      ++|+|+ |..|...|..++++|.+|+++++.+
T Consensus        19 VlVIG~-G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          19 VVVVGS-GGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence            899998 7799999999999999999998764

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=82.52  E-value=0.66  Score=34.19  Aligned_cols=32  Identities=28%  Similarity=0.476  Sum_probs=27.1

Q ss_pred             EEEecCCChHHHHHHHHHHHcCC-EEEEEecCcc
Q 025252           29 AIITGGASGIGASAAQLFHKNGA-KVVIADVQDN   61 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~-~v~~~~r~~~   61 (255)
                      |+|+|| |--|.+.|..|+++|. +|+++.+++.
T Consensus         3 V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~   35 (347)
T d1b5qa1           3 VIVVGA-GMSGISAAKRLSEAGITDLLILEATDH   35 (347)
T ss_dssp             EEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred             EEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence            788888 6789999999999996 7999887643

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=82.42  E-value=9.2  Score=29.64  Aligned_cols=74  Identities=14%  Similarity=0.136  Sum_probs=47.6

Q ss_pred             cCeEEE-EecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh-----CCCceEEEEeeCCCHHHHHHHHHHHHHH
Q 025252           25 QGRVAI-ITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL-----GHQDVCYIHCDVSNEREVINLVDTTVAK   98 (255)
Q Consensus        25 ~~k~~l-VtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   98 (255)
                      +++++| +..++|+++.+.    +..|++|+.++.++...+.+.+..     ...++.++..|+.      +.+++....
T Consensus       132 ~~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~  201 (309)
T d2igta1         132 RPLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERR  201 (309)
T ss_dssp             SCCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHH
T ss_pred             CCCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhc
Confidence            466676 555556655543    457899999999887766555432     2246888888863      334444444


Q ss_pred             cCCccEEEEc
Q 025252           99 FGKLDILVNS  108 (255)
Q Consensus        99 ~g~id~li~~  108 (255)
                      -.++|++|..
T Consensus       202 ~~~fD~IilD  211 (309)
T d2igta1         202 GSTYDIILTD  211 (309)
T ss_dssp             TCCBSEEEEC
T ss_pred             CCCCCEEEEC
Confidence            4579999975

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.41  E-value=0.79  Score=33.67  Aligned_cols=37  Identities=19%  Similarity=0.229  Sum_probs=30.1

Q ss_pred             ecCeE-EEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           24 LQGRV-AIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        24 ~~~k~-~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      |+.+. ++|.|+ |.-|...|.++++.|.+|+++++.+.
T Consensus         2 m~~~yDviVIG~-GpAGl~aA~~aa~~G~kV~lie~~~~   39 (233)
T d1v59a1           2 INKSHDVVIIGG-GPAGYVAAIKAAQLGFNTACVEKRGK   39 (233)
T ss_dssp             EEEEEEEEEECC-SHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred             CCcccCEEEECC-CHHHHHHHHHHHHCCCcEEEEEecCC
Confidence            34444 889998 55699999999999999999987654

>d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC
species: Thermotoga maritima [TaxId: 2336]

Probab=82.22  E-value=1.5  Score=31.39  Aligned_cols=34  Identities=21%  Similarity=0.219  Sum_probs=26.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcC-CEEEEEecCcc
Q 025252           28 VAIITGGASGIGASAAQLFHKNG-AKVVIADVQDN   61 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g-~~v~~~~r~~~   61 (255)
                      ++.|.||||-.|+.+++.|.++. .++..+..+..
T Consensus         3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~   37 (176)
T d1vkna1           3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTY   37 (176)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTT
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCCceEEEeecccc
Confidence            58999999999999999999865 35555443333

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=81.78  E-value=0.54  Score=35.32  Aligned_cols=70  Identities=13%  Similarity=0.026  Sum_probs=52.7

Q ss_pred             ecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC--CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           24 LQGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG--HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        24 ~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      ..++++|=.|+++|.   ++..|+++|.+|+.++.+++.++.+.+..+  ..++.++..|+.+.+           ..++
T Consensus        36 ~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~~  101 (246)
T d1y8ca_          36 LVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INRK  101 (246)
T ss_dssp             CCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSCC
T ss_pred             CCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------cccc
Confidence            456789999998875   688899999999999999887776655432  246888888876532           1247


Q ss_pred             ccEEEE
Q 025252          102 LDILVN  107 (255)
Q Consensus       102 id~li~  107 (255)
                      +|+++.
T Consensus       102 fD~i~~  107 (246)
T d1y8ca_         102 FDLITC  107 (246)
T ss_dssp             EEEEEE
T ss_pred             ccccce
Confidence            898886

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=81.54  E-value=0.98  Score=35.20  Aligned_cols=35  Identities=20%  Similarity=0.343  Sum_probs=31.3

Q ss_pred             eecCeEEEEecCCChHHHHHHHHHHHcCCEEEEEec
Q 025252           23 RLQGRVAIITGGASGIGASAAQLFHKNGAKVVIADV   58 (255)
Q Consensus        23 ~~~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r   58 (255)
                      ++.+|+++|-|- |..|..+|+.|.+.|++|+.++-
T Consensus        33 ~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD   67 (293)
T d1hwxa1          33 GFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE   67 (293)
T ss_dssp             SSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence            578999999988 78999999999999999988753

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=81.43  E-value=3.4  Score=29.25  Aligned_cols=71  Identities=20%  Similarity=0.238  Sum_probs=47.6

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CC-CceEEEEeeCCCHHHHHHHHHHHHHHcC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GH-QDVCYIHCDVSNEREVINLVDTTVAKFG  100 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g  100 (255)
                      .+.+++=.|+++|   .++..+++.+.+|+.++.+++..+.+.+..   +- .++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            4777887787766   233455667789999999988766665443   22 47889998842          2222235


Q ss_pred             CccEEEEc
Q 025252          101 KLDILVNS  108 (255)
Q Consensus       101 ~id~li~~  108 (255)
                      .+|.++.+
T Consensus       100 ~~D~v~~~  107 (186)
T d1l3ia_         100 DIDIAVVG  107 (186)
T ss_dssp             CEEEEEES
T ss_pred             CcCEEEEe
Confidence            78988864

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=81.38  E-value=0.57  Score=33.61  Aligned_cols=36  Identities=17%  Similarity=0.183  Sum_probs=30.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcc
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDN   61 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~   61 (255)
                      +++.++|.|| |-.|.+.|..+++.|.+|+++.+...
T Consensus         4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~~   39 (190)
T d1trba1           4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGMEK   39 (190)
T ss_dssp             EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSST
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeecc
Confidence            5667999998 56999999999999999999987543

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=81.14  E-value=1.4  Score=32.46  Aligned_cols=76  Identities=14%  Similarity=0.212  Sum_probs=52.5

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHhC---CCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKLG---HQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+.+++-.|+++|.-.++..++......|+.++.+++..+...+.+.   ..++.++..|..+..          ...+.
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            46689999998887776666665666799999999887666655443   357777777764311          11257


Q ss_pred             ccEEEEcCC
Q 025252          102 LDILVNSGC  110 (255)
Q Consensus       102 id~li~~a~  110 (255)
                      +|.++.+++
T Consensus       145 fD~I~~~~~  153 (213)
T d1dl5a1         145 YDVIFVTVG  153 (213)
T ss_dssp             EEEEEECSB
T ss_pred             hhhhhhhcc
Confidence            999887643

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.13  E-value=0.97  Score=32.67  Aligned_cols=39  Identities=18%  Similarity=0.253  Sum_probs=31.1

Q ss_pred             EEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHH
Q 025252           28 VAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALAD   68 (255)
Q Consensus        28 ~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~   68 (255)
                      ++.|.| .|.+|..+|..|+ +|++|+..|.+++..+++.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l~~   40 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKINN   40 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHHHT
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHHhh
Confidence            467776 6899999998775 69999999999887666543

>d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Pyranose 2-oxidase
species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]

Probab=81.10  E-value=0.66  Score=36.72  Aligned_cols=29  Identities=31%  Similarity=0.510  Sum_probs=25.7

Q ss_pred             EEEecCCChHHHHHHHHHHHcCCEEEEEec
Q 025252           29 AIITGGASGIGASAAQLFHKNGAKVVIADV   58 (255)
Q Consensus        29 ~lVtGas~giG~aia~~l~~~g~~v~~~~r   58 (255)
                      ++|+|++- =|..+|.+|++.|.+|+++.+
T Consensus         7 viIVGsG~-aG~v~A~~La~~G~kVlvLEa   35 (379)
T d2f5va1           7 VVIVGSGP-IGCTYARELVGAGYKVAMFDI   35 (379)
T ss_dssp             EEEECCSH-HHHHHHHHHHHTTCEEEEECS
T ss_pred             EEEECcCH-HHHHHHHHHhhCCCeEEEEec
Confidence            78999855 499999999999999999875

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=80.98  E-value=3.7  Score=27.52  Aligned_cols=74  Identities=14%  Similarity=0.197  Sum_probs=49.2

Q ss_pred             cCeEEEEecCCC-hH---------HHHHHHHHHHcCCEEEEEecCcchHHHHHHHhCCCceEEEEeeCCCHHHHHHHHHH
Q 025252           25 QGRVAIITGGAS-GI---------GASAAQLFHKNGAKVVIADVQDNLGQALADKLGHQDVCYIHCDVSNEREVINLVDT   94 (255)
Q Consensus        25 ~~k~~lVtGas~-gi---------G~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   94 (255)
                      ..|+++|.|++. .|         +...+++|.+.|++++++..|++....-.+.  .++++   .+--+.+++.++++.
T Consensus         6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~--aD~lY---fePlt~e~v~~Ii~~   80 (127)
T d1a9xa3           6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEM--ADATY---IEPIHWEVVRKIIEK   80 (127)
T ss_dssp             SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGG--SSEEE---CSCCCHHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhh--cceee---eecCCHHHHHHHHHH
Confidence            457899999864 34         4566788888999999999887764331111  12333   333447888777776


Q ss_pred             HHHHcCCccEEEEc
Q 025252           95 TVAKFGKLDILVNS  108 (255)
Q Consensus        95 ~~~~~g~id~li~~  108 (255)
                      -     ++|.++-.
T Consensus        81 E-----~pd~il~~   89 (127)
T d1a9xa3          81 E-----RPDAVLPT   89 (127)
T ss_dssp             H-----CCSEEECS
T ss_pred             h-----CcCCeEEE
Confidence            4     89998863

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=80.52  E-value=0.97  Score=35.52  Aligned_cols=34  Identities=18%  Similarity=0.241  Sum_probs=27.4

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC--CEEEEEecCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG--AKVVIADVQDN   61 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g--~~v~~~~r~~~   61 (255)
                      |+|+|+|| |--|.++|..|+++|  .+|++..++..
T Consensus         5 KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            56888888 667888888998876  59999988754

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.50  E-value=1.5  Score=30.38  Aligned_cols=35  Identities=11%  Similarity=0.041  Sum_probs=26.6

Q ss_pred             eEEEEecCCChHHHHHHHHHHHcC----CEEEEEecCcc
Q 025252           27 RVAIITGGASGIGASAAQLFHKNG----AKVVIADVQDN   61 (255)
Q Consensus        27 k~~lVtGas~giG~aia~~l~~~g----~~v~~~~r~~~   61 (255)
                      |++.|.||||-.|+.+.+.|+++.    .+++..+++..
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s   40 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL   40 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred             cEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence            357888999999999999887753    35666665544

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=80.38  E-value=2  Score=30.82  Aligned_cols=71  Identities=15%  Similarity=0.108  Sum_probs=48.9

Q ss_pred             cCeEEEEecCCChHHHHHHHHHHHcCCEEEEEecCcchHHHHHHHh---CCCceEEEEeeCCCHHHHHHHHHHHHHHcCC
Q 025252           25 QGRVAIITGGASGIGASAAQLFHKNGAKVVIADVQDNLGQALADKL---GHQDVCYIHCDVSNEREVINLVDTTVAKFGK  101 (255)
Q Consensus        25 ~~k~~lVtGas~giG~aia~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  101 (255)
                      .+..+|=.|++.|  + .+..|+++|++|+.++.++..++.+....   +-.++.+...|+.+..-           .+.
T Consensus        30 ~~grvLDiGcG~G--~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~~-----------~~~   95 (198)
T d2i6ga1          30 APGRTLDLGCGNG--R-NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLTF-----------DGE   95 (198)
T ss_dssp             CSCEEEEETCTTS--H-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCCC-----------CCC
T ss_pred             CCCcEEEECCCCC--H-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccccc-----------ccc
Confidence            4557898888644  4 46788899999999999988766554333   22457777778765331           147


Q ss_pred             ccEEEEcC
Q 025252          102 LDILVNSG  109 (255)
Q Consensus       102 id~li~~a  109 (255)
                      +|+++.+.
T Consensus        96 fD~I~~~~  103 (198)
T d2i6ga1          96 YDFILSTV  103 (198)
T ss_dssp             EEEEEEES
T ss_pred             ccEEEEee
Confidence            89888643