BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>025253
MAASANPVGNNNNQEGSSAAQKSTANGVSVNSSNNGGNSPAVIDTSQTASALRHNSGIST
EWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKKENGKRRKED
HNSARKNKDRKEKATDSSAKSSSHLAARPNGPSYAPPMIPMDTDDGISYRAIGGITGDIL
EQNAQMFNQISANFGTFQIRDNIDLLCKARENILSIMNDLNDMPEIMKQMPPLPVKVNDD
LANSFLPRPSHQMNS

High Scoring Gene Products

Symbol, full name Information P value
AT1G10820 protein from Arabidopsis thaliana 1.3e-34
AT1G68160 protein from Arabidopsis thaliana 1.2e-33
AT1G60670 protein from Arabidopsis thaliana 5.2e-33
AT2G43470 protein from Arabidopsis thaliana 7.7e-16
DDB_G0286135
ZZ-type zinc finger-containing protein
gene from Dictyostelium discoideum 0.00069

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  025253
        (255 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2196480 - symbol:AT1G10820 "AT1G10820" species...   375  1.3e-34   1
TAIR|locus:2199302 - symbol:AT1G68160 species:3702 "Arabi...   366  1.2e-33   1
TAIR|locus:2036556 - symbol:AT1G60670 species:3702 "Arabi...   360  5.2e-33   1
TAIR|locus:2058188 - symbol:AT2G43470 "AT2G43470" species...   198  7.7e-16   1
DICTYBASE|DDB_G0286135 - symbol:DDB_G0286135 "ZZ-type zin...   112  0.00069   1


>TAIR|locus:2196480 [details] [associations]
            symbol:AT1G10820 "AT1G10820" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 EMBL:AC007354 InterPro:IPR022228
            Pfam:PF12579 IPI:IPI00519026 RefSeq:NP_973807.1 UniGene:At.45999
            ProteinModelPortal:Q3EDE9 SMR:Q3EDE9 EnsemblPlants:AT1G10820.2
            GeneID:837625 KEGG:ath:AT1G10820 TAIR:At1g10820 eggNOG:NOG235438
            HOGENOM:HOG000239279 InParanoid:Q3EDE9 OMA:QARNNIS PhylomeDB:Q3EDE9
            ProtClustDB:CLSN2690868 Genevestigator:Q3EDE9 Uniprot:Q3EDE9
        Length = 258

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 82/207 (39%), Positives = 124/207 (59%)

Query:    40 PAVIDTSQTASALRHNSGISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVR 99
             PAV  +   A+ ++  + +  +W+ EEQ +LE+ LAK   +  +++Y KIA  L DKTVR
Sbjct:    36 PAVDASGSVAAGVKQEAALVMDWSVEEQYVLENGLAKLKDEPKISKYVKIAATLPDKTVR 95

Query:   100 DVALRCRWMTKKENGKRRKEDHNSARKNKDRKEKATDSSAKSSSHLAARPNGPSYAPPMI 159
             DVALRCRWMT+K   +R++ED+N+A+    RK   T       S++  + N   Y   + 
Sbjct:    96 DVALRCRWMTRK---RRKREDNNAAKNISTRKVVDTSPELNMLSNVPQQ-NA-LYV--LN 148

Query:   160 PMDTDDGISYRAIGGITGDILEQNAQMFNQISANFGTFQIRDNIDLLCKARENILSIMND 219
              M       +  +     D+L+QNAQ F+QIS N    +++DNI L  +AR NI +I+ D
Sbjct:   149 NMCHSTRTPFEGLSDAVMDLLQQNAQAFSQISYNLSACKLQDNISLFHQARNNISAILTD 208

Query:   220 LNDMPEIMKQMPPLPVKVNDDLANSFL 246
             + +MP IM +MP LPV +NDDLA++ L
Sbjct:   209 MKEMPGIMSRMPALPVSINDDLASNLL 235


>TAIR|locus:2199302 [details] [associations]
            symbol:AT1G68160 species:3702 "Arabidopsis thaliana"
            [GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684
            GenomeReviews:CT485782_GR InterPro:IPR022228 Pfam:PF12579
            HOGENOM:HOG000239279 EMBL:BT005274 EMBL:AK117182 IPI:IPI00525794
            RefSeq:NP_564923.1 UniGene:At.35563 ProteinModelPortal:Q8GZ67
            PRIDE:Q8GZ67 EnsemblPlants:AT1G68160.1 GeneID:843144
            KEGG:ath:AT1G68160 TAIR:At1g68160 eggNOG:NOG274057
            InParanoid:Q8GZ67 OMA:SEELNCG PhylomeDB:Q8GZ67
            ProtClustDB:CLSN2917402 Genevestigator:Q8GZ67 Uniprot:Q8GZ67
        Length = 273

 Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
 Identities = 74/197 (37%), Positives = 119/197 (60%)

Query:    46 SQTASALRHNSGISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRC 105
             S + S L+ ++ + +EW+ EEQ IL+  L KY    +++ Y +I   L DK++RD+ALRC
Sbjct:    64 SDSGSGLKLDTSMVSEWSNEEQYILDAGLEKYKDMPSIDMYIQIGNTLPDKSIRDIALRC 123

Query:   106 RWMTKKENGKRRKEDHNSARKNKDRKEKATDSSAKSSSHLAARPNGPSYAPPMIPMDTDD 165
             RW+ +K   +R+ E+ N  R+    K K  +SS+KSS       N  SY        T  
Sbjct:   124 RWLRRK---RRKSEELNCGRRASSSKGKQVESSSKSSIPSVLPHNMASYPFSGPSTSTSK 180

Query:   166 GISYRAIGGITGDILEQNAQMFNQISANFGTFQIRDNIDLLCKARENILSIMNDLNDMPE 225
              I+   +     +++EQN + F+QI AN  +++  DN+DL  +AR N+++I N++N+MP 
Sbjct:   181 QITSEDLSSYATNLIEQNVRAFSQIRANLSSYKAGDNLDLFRQARNNLITIQNEINNMPG 240

Query:   226 IMKQMPPLPVKVNDDLA 242
             +M +MPPLPV +NDDL+
Sbjct:   241 LMNKMPPLPVTINDDLS 257


>TAIR|locus:2036556 [details] [associations]
            symbol:AT1G60670 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 UniGene:At.19209
            UniGene:At.43808 InterPro:IPR022228 Pfam:PF12579
            HOGENOM:HOG000239279 ProtClustDB:CLSN2690868 EMBL:AY045897
            EMBL:AY091451 IPI:IPI00531396 RefSeq:NP_001077745.1
            ProteinModelPortal:Q94AP2 IntAct:Q94AP2 STRING:Q94AP2 PRIDE:Q94AP2
            EnsemblPlants:AT1G60670.2 GeneID:842361 KEGG:ath:AT1G60670
            TAIR:At1g60670 OMA:HHARRNI PhylomeDB:Q94AP2 ArrayExpress:Q94AP2
            Genevestigator:Q94AP2 Uniprot:Q94AP2
        Length = 254

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 76/204 (37%), Positives = 121/204 (59%)

Query:    43 IDTSQTASALRHNSGISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVA 102
             +++  + + L+H + ++ +W+ EEQ ILE  L+K+  +  V +Y KIA  L DK+VRDVA
Sbjct:    35 VNSPTSVTGLKHEASLAVDWSVEEQYILEKGLSKFKDEPQVTKYVKIAATLPDKSVRDVA 94

Query:   103 LRCRWMTKKENGKRRKEDHNSARKNKDRKEKATDSSAKSSSHLAARPNGPSYAPPMIPMD 162
             +RC+WMT+K   +R+ E+H++  K   RK    D   K +          +YA  M  M 
Sbjct:    95 MRCKWMTQK---RRKGEEHSTGTKVSYRK--VVDLPPKLNMFSTEPQQNATYA--MNHMC 147

Query:   163 TDDGISYRAIGGITGDILEQNAQMFNQISANFGTFQIRDNIDLLCKARENILSIMNDLND 222
                 + +  +     + L QNAQ F+QIS+N    + +DN+ L   AR NI +I+ND+ +
Sbjct:   148 QSARMPFEGLSDAVMERLRQNAQAFSQISSNLSVCKPQDNVSLFYMARNNISAILNDMKE 207

Query:   223 MPEIMKQMPPLPVKVNDDLANSFL 246
             MP I+ +MPPLPV +N+DLA+S +
Sbjct:   208 MPGIISRMPPLPVSINNDLASSLV 231


>TAIR|locus:2058188 [details] [associations]
            symbol:AT2G43470 "AT2G43470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002685 IPI:IPI00938953 RefSeq:NP_181875.5
            UniGene:At.36891 ProteinModelPortal:F4IR55 SMR:F4IR55 PRIDE:F4IR55
            EnsemblPlants:AT2G43470.1 GeneID:818948 KEGG:ath:AT2G43470
            OMA:RSRWIYN InterPro:IPR022228 Pfam:PF12579 Uniprot:F4IR55
        Length = 210

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 66/204 (32%), Positives = 97/204 (47%)

Query:    43 IDTSQTASALRHNSGISTEWTPEEQSILEDLLAKYASDS--AVNRYAKIAKQLKDKTVRD 100
             + T   +S L   SGI+  WT  E  IL  LL  Y+SDS  AV RY +I + L+DKT+RD
Sbjct:    11 LTTPSESSLLISRSGIALNWTTAEDDILIQLLDSYSSDSRSAVTRYLQILEFLQDKTIRD 70

Query:   101 VALRCRWMTKKENGKRRKEDHNSARKNKDRKEKATDSSAKSSSHLAARPNGPSYAPPMIP 160
             VA R RW+  K+  K++KEDHN     +   E+  +        LA++     Y P  + 
Sbjct:    71 VAARSRWIYNKKIAKKKKEDHNGLGTTRVDNEEIVNMV------LASQV----YQPSQVF 120

Query:   161 MDTDDGISYRAIGGITGDILEQNAQM-FNQISANFGTFQ-IRDNIDLLCK-ARENILSIM 217
               +  G+    +        +  A + F  ++ N   F+ IR+NI  L K   EN+    
Sbjct:   121 QPSQHGVHNELLNHNKQWFNQIYANLTFLNLTDNLDLFRKIRENIKSLLKDLNENVSETW 180

Query:   218 NDLNDMPEIMKQMPPLPVKVNDDL 241
              +   MP        LP K+ND+L
Sbjct:   181 KN---MPS------SLPEKLNDEL 195


>DICTYBASE|DDB_G0286135 [details] [associations]
            symbol:DDB_G0286135 "ZZ-type zinc finger-containing
            protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR000433 InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 Pfam:PF00569 PROSITE:PS50135 SMART:SM00291
            SMART:SM00717 dictyBase:DDB_G0286135 GO:GO:0003677 GO:GO:0008270
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AAFI02000085
            InterPro:IPR017930 PROSITE:PS51294 eggNOG:NOG126842
            RefSeq:XP_637861.1 ProteinModelPortal:Q54M87 SMR:Q54M87
            EnsemblProtists:DDB0216345 GeneID:8625458 KEGG:ddi:DDB_G0286135
            InParanoid:Q54M87 OMA:SSHHMTA Uniprot:Q54M87
        Length = 412

 Score = 112 (44.5 bits), Expect = 0.00069, P = 0.00069
 Identities = 28/93 (30%), Positives = 52/93 (55%)

Query:    60 TEWTPEEQSILEDLLAKYASDS-AVNRYAKIAKQLKDKTVRDVALRCRWMTKK-EN---- 113
             T WT EEQ +LE LL KY  +  A +R+ KIA  +K +T + VA R +   KK E     
Sbjct:   197 TYWTEEEQKLLEQLLVKYPEEEVASHRWTKIATHIKGRTPQQVASRTQKFFKKLEKAGLR 256

Query:   114 --GKRRKEDHNSARKNKDRKEKATDSSAKSSSH 144
               G R+K+     ++ + ++++  +++  ++++
Sbjct:   257 IPGSRKKKQSQQQQQQQQQQQQQNNNNNNNNNN 289


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.125   0.350    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      255       241   0.00094  113 3  11 23  0.37    34
                                                     32  0.44    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  5
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  170 KB (2100 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  26.13u 0.10s 26.23t   Elapsed:  00:00:01
  Total cpu time:  26.13u 0.10s 26.23t   Elapsed:  00:00:02
  Start:  Fri May 10 00:09:02 2013   End:  Fri May 10 00:09:04 2013

Back to top