Query 025253
Match_columns 255
No_of_seqs 112 out of 133
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 06:41:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025253.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/025253hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2cqqa1 a.4.1.3 (A:8-66) DnaJ 99.4 1.1E-13 7.7E-18 98.9 6.3 51 59-111 1-51 (59)
2 d2cqra1 a.4.1.3 (A:7-66) DnaJ 99.2 1.7E-11 1.2E-15 86.1 6.8 50 58-108 11-60 (60)
3 d2cjja1 a.4.1.3 (A:8-70) Radia 99.0 3E-10 2.2E-14 80.3 6.5 50 60-110 2-51 (63)
4 d2iw5b1 a.4.1.3 (B:376-440) RE 98.5 1.2E-07 9E-12 66.6 6.8 49 58-111 4-52 (65)
5 d2cu7a1 a.4.1.3 (A:8-72) MYSM1 98.4 1.8E-07 1.3E-11 65.5 5.4 48 59-111 2-49 (65)
6 d1x41a1 a.4.1.1 (A:8-54) Trans 98.3 6.3E-07 4.6E-11 59.8 6.2 44 60-107 2-45 (47)
7 d2crga1 a.4.1.3 (A:8-64) Metas 98.3 7.2E-07 5.2E-11 61.8 6.5 48 61-113 3-51 (57)
8 d1xc5a1 a.4.1.3 (A:413-480) Nu 98.2 5E-07 3.6E-11 64.0 3.9 47 57-108 15-61 (68)
9 d1ug2a_ a.4.1.3 (A:) 2610100b2 98.1 1E-05 7.5E-10 61.8 9.1 54 55-110 29-82 (95)
10 d1gvda_ a.4.1.3 (A:) c-Myb, DN 98.0 5E-06 3.7E-10 56.4 6.4 46 59-108 3-48 (52)
11 d1guua_ a.4.1.3 (A:) c-Myb, DN 98.0 7.1E-06 5.2E-10 55.0 6.3 45 60-108 2-46 (50)
12 d1gv2a2 a.4.1.3 (A:144-190) c- 98.0 4.6E-06 3.3E-10 55.6 5.2 44 60-108 2-45 (47)
13 d1igna1 a.4.1.6 (A:360-445) DN 97.7 2.3E-05 1.6E-09 58.3 6.0 54 60-113 2-56 (86)
14 d1w0ta_ a.4.1.4 (A:) DNA-bindi 97.5 8E-05 5.8E-09 50.1 5.8 46 60-109 3-50 (52)
15 d1w0ua_ a.4.1.4 (A:) Telomeric 97.5 7.9E-05 5.7E-09 50.6 5.2 48 60-111 3-52 (55)
16 d2ckxa1 a.4.1.3 (A:578-660) Te 96.8 0.00094 6.9E-08 48.5 5.8 46 61-110 2-51 (83)
17 d1irza_ a.4.1.11 (A:) Arr10-B 96.3 0.0041 3E-07 43.7 5.9 51 59-111 7-59 (64)
18 d1wgxa_ a.4.1.3 (A:) Hypotheti 96.1 0.0065 4.8E-07 43.8 6.4 47 59-106 8-54 (73)
19 d1ofcx1 a.4.1.3 (X:799-850) SA 94.1 0.025 1.8E-06 38.2 4.0 39 61-103 1-39 (52)
20 d1wh7a_ a.4.1.1 (A:) ZF-HD hom 77.9 4.8 0.00035 27.9 7.5 51 57-111 19-72 (80)
21 d1ig7a_ a.4.1.1 (A:) Msx-1 hom 72.4 3.7 0.00027 26.7 5.3 48 59-111 4-51 (58)
22 d1pufa_ a.4.1.1 (A:) Homeobox 67.6 9.2 0.00067 26.3 6.9 50 57-111 15-64 (77)
23 d1uhsa_ a.4.1.1 (A:) Homeodoma 63.8 8.2 0.00059 26.4 5.9 50 58-111 4-53 (72)
24 d1jgga_ a.4.1.1 (A:) Even-skip 61.6 9.9 0.00072 24.5 5.7 48 59-111 3-50 (57)
25 d1vnda_ a.4.1.1 (A:) VND/NK-2 59.0 9.9 0.00072 26.1 5.6 49 58-111 12-60 (77)
26 d1wi3a_ a.4.1.1 (A:) DNA-bindi 59.0 6.1 0.00044 26.6 4.4 49 59-111 11-59 (71)
27 d1au7a1 a.4.1.1 (A:103-160) Pi 58.8 11 0.00077 24.5 5.5 48 59-111 3-50 (58)
28 d1e3oc1 a.4.1.1 (C:104-160) Oc 57.8 11 0.00082 24.3 5.5 48 59-111 2-49 (57)
29 d1b0aa2 c.58.1.2 (A:2-122) Tet 56.9 2.3 0.00017 31.7 1.9 29 218-247 86-114 (121)
30 d1p7ia_ a.4.1.1 (A:) Engrailed 52.3 14 0.001 23.3 5.2 48 59-111 3-50 (53)
31 d1x58a1 a.4.1.1 (A:8-56) Hypot 52.3 10 0.00076 24.5 4.4 47 60-108 2-48 (49)
32 d1bw5a_ a.4.1.1 (A:) Insulin g 51.3 16 0.0012 24.2 5.5 49 58-111 6-54 (66)
33 d1s7ea1 a.4.1.1 (A:103-152) He 50.2 8.8 0.00064 23.9 3.8 43 59-103 2-44 (50)
34 d1lfba_ a.4.1.1 (A:) Hepatocyt 47.1 13 0.00092 25.7 4.6 33 60-93 2-34 (78)
35 d2cqxa1 a.4.1.1 (A:8-66) LAG1 46.5 6.2 0.00045 25.9 2.6 49 59-111 5-53 (59)
36 d1fs1b1 a.157.1.1 (B:86-140) C 46.0 5.4 0.00039 26.2 2.2 18 85-102 34-51 (55)
37 d1zq3p1 a.4.1.1 (P:2-68) Homeo 45.2 17 0.0013 24.0 4.9 48 59-111 5-52 (67)
38 d2cufa1 a.4.1.1 (A:8-89) Homeo 44.6 14 0.001 25.4 4.5 49 59-111 4-66 (82)
39 d2ecca1 a.4.1.1 (A:1-76) Homeo 43.6 33 0.0024 22.9 6.3 46 61-111 9-54 (76)
40 d1fjla_ a.4.1.1 (A:) Paired pr 42.8 24 0.0017 23.1 5.3 49 58-111 5-53 (65)
41 d1x2ma1 a.4.1.1 (A:8-59) Lag1 42.2 12 0.00088 23.8 3.5 45 63-111 1-45 (52)
42 d2ecba1 a.4.1.1 (A:8-83) Zinc 41.9 20 0.0015 24.1 4.9 44 63-111 12-55 (76)
43 d1b72a_ a.4.1.1 (A:) Homeobox 41.3 23 0.0017 24.7 5.3 50 57-111 29-78 (88)
44 d2craa1 a.4.1.1 (A:7-64) Homeo 40.6 33 0.0024 22.0 5.7 48 59-111 5-52 (58)
45 d1le8a_ a.4.1.1 (A:) Mating ty 40.3 37 0.0027 21.2 5.8 47 60-111 2-48 (53)
46 d2e1oa1 a.4.1.1 (A:8-64) Homeo 36.0 48 0.0035 21.0 6.2 43 59-103 4-46 (57)
47 d1edza2 c.58.1.2 (A:3-148) Tet 33.8 8 0.00059 29.8 1.8 29 217-246 84-112 (146)
48 d1nexa1 a.157.1.1 (A:116-185) 32.4 11 0.00083 25.5 2.2 17 85-101 35-51 (70)
49 d2cuea1 a.4.1.1 (A:7-74) Paire 29.5 53 0.0039 21.5 5.4 43 59-103 5-47 (68)
50 d2cfxa1 a.4.5.32 (A:1-63) Tran 29.2 19 0.0014 23.3 2.9 27 85-112 21-47 (63)
51 d1yz8p1 a.4.1.1 (P:1-60) Pitui 28.4 34 0.0025 21.8 4.1 48 59-111 5-52 (60)
52 d1a4ia2 c.58.1.2 (A:2-126) Tet 25.7 13 0.00094 27.4 1.6 29 218-247 88-119 (125)
53 d2f4mb1 a.189.1.1 (B:275-332) 24.6 40 0.0029 22.3 3.9 44 175-222 13-56 (58)
54 d1ocpa_ a.4.1.1 (A:) Oct-3 POU 22.5 72 0.0052 20.8 5.0 49 58-111 11-59 (67)
No 1
>d2cqqa1 a.4.1.3 (A:8-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.42 E-value=1.1e-13 Score=98.86 Aligned_cols=51 Identities=29% Similarity=0.562 Sum_probs=47.3
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
+.+||.|||+.||.+|.+||.++ ++||.+||..| +||+.||..||+.|...
T Consensus 1 a~eWT~ee~~~le~Al~~~P~gt-~~RW~~IA~~v-gkt~~ev~~~~k~l~e~ 51 (59)
T d2cqqa1 1 APEWTEEDLSQLTRSMVKFPGGT-PGRWEKIAHEL-GRSVTDVTTKAKQLKDS 51 (59)
T ss_dssp CCCCCHHHHHHHHHHHHHSCTTC-TTHHHHHHHHH-TSCHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHHHHHHHHCCCCC-cHHHHHHHHHH-CCCHHHHHHHHHHHHHh
Confidence 46899999999999999999997 69999999999 79999999999988754
No 2
>d2cqra1 a.4.1.3 (A:7-66) DnaJ homolog subfamily C member 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.19 E-value=1.7e-11 Score=86.09 Aligned_cols=50 Identities=28% Similarity=0.474 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
....||.||+.+|++++.+|+.+. ..||.+||..||+||..||..||++|
T Consensus 11 ~~~~WT~eEd~~L~~~v~~~~~~~-~~~W~~IA~~l~~Rt~~qc~~R~~~L 60 (60)
T d2cqra1 11 AEEPWTQNQQKLLELALQQYPRGS-SDCWDKIARCVPSKSKEDCIARYKLL 60 (60)
T ss_dssp SSCCCCHHHHHHHHHHHHHSCSSS-HHHHHHHGGGCSSSCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHHHHHHHHHcCCcc-chHHHHHHHHcCCCCHHHHHHHHHHC
Confidence 345799999999999999999886 68999999999999999999999986
No 3
>d2cjja1 a.4.1.3 (A:8-70) Radialis {Garden snapdragon (Antirrhinum majus) [TaxId: 4151]}
Probab=99.00 E-value=3e-10 Score=80.32 Aligned_cols=50 Identities=24% Similarity=0.510 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhcc
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTK 110 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~ 110 (255)
..||.||+++|++++.+|+.+. ..||.+||..||+||+.||..|++.+..
T Consensus 2 ~~WT~eEd~~L~~~v~~~~~~~-~~~W~~Ia~~l~gRt~~qc~~r~~~L~~ 51 (63)
T d2cjja1 2 RPWSAKENKAFERALAVYDKDT-PDRWANVARAVEGRTPEEVKKHYEILVE 51 (63)
T ss_dssp CSCCHHHHHHHHHHHHHSCTTC-TTHHHHHHHHSTTCCHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCC-chHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 4699999999999999999875 5799999999999999999999987753
No 4
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.50 E-value=1.2e-07 Score=66.60 Aligned_cols=49 Identities=22% Similarity=0.361 Sum_probs=43.5
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
....||.||..+|.++|.+|.. +|.+||..||+||+.||-.|+..+.++
T Consensus 4 ~~~~WT~eE~~~f~~~~~~~G~-----~w~~Ia~~~~~kt~~q~~~~y~~~~k~ 52 (65)
T d2iw5b1 4 CNARWTTEEQLLAVQAIRKYGR-----DFQAISDVIGNKSVVQVKNFFVNYRRR 52 (65)
T ss_dssp CCSSCCHHHHHHHHHHHHHHSS-----CHHHHHHHHSSCCHHHHHHHHHHTTTT
T ss_pred CCCCCCHHHHHHHHHHHHHhCc-----hHHHHHHHcCCCCHHHHHHHHHHHHhh
Confidence 4578999999999999999995 499999999999999999999766543
No 5
>d2cu7a1 a.4.1.3 (A:8-72) MYSM1 (KIAA1915) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.40 E-value=1.8e-07 Score=65.45 Aligned_cols=48 Identities=38% Similarity=0.544 Sum_probs=43.0
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
++.||.||..+|.+++.+|.. .|.+||..||+||..+|-.|++-+.++
T Consensus 2 ~~~WT~eEd~~l~~~~~~~G~-----~W~~Ia~~~~~Rt~~q~k~ry~~~~~~ 49 (65)
T d2cu7a1 2 SVKWTIEEKELFEQGLAKFGR-----RWTKISKLIGSRTVLQVKSYARQYFKN 49 (65)
T ss_dssp CCCCCHHHHHHHHHHHHHTCS-----CHHHHHHHHSSSCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhcc-----hHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 578999999999999999974 699999999999999999999766543
No 6
>d1x41a1 a.4.1.1 (A:8-54) Transcriptional adaptor 2-like, TADA2L, isoform b {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30 E-value=6.3e-07 Score=59.82 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHh
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRW 107 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rw 107 (255)
.+||.||..+|.+++.+|.. ..|.+||..||+||.++|-.|+..
T Consensus 2 ~~Wt~eEd~~L~~~v~~~G~----~nW~~Ia~~~~~Rt~~Qcr~r~~~ 45 (47)
T d1x41a1 2 PSWTAQEEMALLEAVMDCGF----GNWQDVANQMCTKTKEECEKHYMK 45 (47)
T ss_dssp SSSCHHHHHHHHHHHHHTCT----TCHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCC----ccHHHHHHHcCCCCHHHHHHHHHH
Confidence 36999999999999999963 369999999999999999998864
No 7
>d2crga1 a.4.1.3 (A:8-64) Metastasis associated protein MTA3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.29 E-value=7.2e-07 Score=61.82 Aligned_cols=48 Identities=23% Similarity=0.437 Sum_probs=40.3
Q ss_pred CCCHHHHHHHHHHHhhhcCCchhhHHHHHHH-HcCCCCHHHHHHHHHhhccccc
Q 025253 61 EWTPEEQSILEDLLAKYASDSAVNRYAKIAK-QLKDKTVRDVALRCRWMTKKEN 113 (255)
Q Consensus 61 ~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~-~Lp~KTvrDVAlR~rwm~~kEn 113 (255)
.||.||.++|++||..|..+ |.+||. ++|+||+.||..-+=...+.+.
T Consensus 3 ~WT~eE~~~F~~~~~~yGKd-----f~~I~~~~v~~Ks~~~~v~fYY~~Kkt~~ 51 (57)
T d2crga1 3 EWSASEACLFEEALEKYGKD-----FNDIRQDFLPWKSLTSIIEYYYMWKTTDR 51 (57)
T ss_dssp CCCHHHHHHHHHHHHHTCSC-----HHHHHHTTCSSSCHHHHHHHHHHHHTCCS
T ss_pred CCCHHHHHHHHHHHHHHccc-----HHHHHHHHcCCCCHHHHHHHHHHHhCCch
Confidence 69999999999999999985 678997 6899999999998754444443
No 8
>d1xc5a1 a.4.1.3 (A:413-480) Nuclear receptor corepressor 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.19 E-value=5e-07 Score=64.03 Aligned_cols=47 Identities=19% Similarity=0.337 Sum_probs=41.2
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 57 GISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 57 ~~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
.....||.||..+|.+++..|.. .|.+||..||+||+.||..|+.-.
T Consensus 15 ~~~~~WT~eE~~~f~~~~~~~G~-----~w~~Ia~~~~~rt~~q~~~~yy~~ 61 (68)
T d1xc5a1 15 QVMNMWSEQEKETFREKFMQHPK-----NFGLIASFLERKTVAECVLYYYLT 61 (68)
T ss_dssp TTTTCCCTTTHHHHHHHHHHTTS-----CSSSHHHHTTTSCHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHHHCC-----cHHHHHHHcCCCCHHHHHHHHHHH
Confidence 34567999999999999999985 389999999999999999998543
No 9
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.05 E-value=1e-05 Score=61.84 Aligned_cols=54 Identities=20% Similarity=0.334 Sum_probs=46.4
Q ss_pred cCCCCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhcc
Q 025253 55 NSGISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTK 110 (255)
Q Consensus 55 ~~~~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~ 110 (255)
...+...||.||.++|-+...+|... ..-|.+||..|++||.-+|-.|++.+.+
T Consensus 29 ~G~~~~~WTrEEDriIL~~~q~~G~~--~~tw~~Ia~~L~~Rs~~qvr~Rf~~Lm~ 82 (95)
T d1ug2a_ 29 TGEKVVLWTREADRVILTMCQEQGAQ--PHTFSVISQQLGNKTPVEVSHRFRELMQ 82 (95)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHTTSC--TTTHHHHHHHHSSCCHHHHHHHHHHHHH
T ss_pred CCCccCCcCHHHHHHHHHHHHHcCCc--HHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 33467889999999999999988853 3569999999999999999999998764
No 10
>d1gvda_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.04 E-value=5e-06 Score=56.36 Aligned_cols=46 Identities=33% Similarity=0.474 Sum_probs=40.6
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
...||.||..+|.++..+|.. .+|..||..||++|..+|-.|++-+
T Consensus 3 rg~WT~eED~~L~~~v~~~g~----~~W~~Ia~~l~~Rt~~qc~~Rw~~~ 48 (52)
T d1gvda_ 3 KGPWTKEEDQRLIKLVQKYGP----KRWSVIAKHLKGRIGKQCRERWHNH 48 (52)
T ss_dssp CCSCCHHHHHHHHHHHHHHCT----TCHHHHHTTSTTCCHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHHCC----CCHHHHHHHHCCCCHHHHHHHHHhh
Confidence 357999999999999999964 3599999999999999999998754
No 11
>d1guua_ a.4.1.3 (A:) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.99 E-value=7.1e-06 Score=54.96 Aligned_cols=45 Identities=29% Similarity=0.434 Sum_probs=40.2
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
..||.||..+|.++..+|... .|.+||..||+||..+|-.|++-+
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~----~W~~Ia~~~~~Rt~~qcr~Rw~~~ 46 (50)
T d1guua_ 2 TRWTREEDEKLKKLVEQNGTD----DWKVIANYLPNRTDVQCQHRWQKV 46 (50)
T ss_dssp CCCCHHHHHHHHHHHHHHCSS----CHHHHHHTSTTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC----CHHHHHHHHCCCCHHHHHHHHHhh
Confidence 479999999999999999754 499999999999999999888654
No 12
>d1gv2a2 a.4.1.3 (A:144-190) c-Myb, DNA-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.98 E-value=4.6e-06 Score=55.62 Aligned_cols=44 Identities=30% Similarity=0.412 Sum_probs=40.0
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
..||.||..+|-++..+|.. +|.+||..||++|..+|-.|+.-+
T Consensus 2 ~~WT~eED~~L~~~v~~~G~-----~W~~Ia~~~~gRt~~~~knr~~~~ 45 (47)
T d1gv2a2 2 TSWTEEEDRIIYQAHKRLGN-----RWAEIAKLLPGRTDNAIKNHWNST 45 (47)
T ss_dssp CCCCHHHHHHHHHHHHHHSS-----CHHHHHTTCTTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhh-----HHHHHHhHcCCCCHHHHHHHHHHH
Confidence 57999999999999999983 799999999999999999888754
No 13
>d1igna1 a.4.1.6 (A:360-445) DNA-binding domain of rap1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.74 E-value=2.3e-05 Score=58.31 Aligned_cols=54 Identities=20% Similarity=0.294 Sum_probs=46.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCC-chhhHHHHHHHHcCCCCHHHHHHHHHhhccccc
Q 025253 60 TEWTPEEQSILEDLLAKYASD-SAVNRYAKIAKQLKDKTVRDVALRCRWMTKKEN 113 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e-~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~kEn 113 (255)
..||.||.++|.+...+|+.. .....|.+||..||++|.++|--|++-....+-
T Consensus 2 ~~WT~eED~~L~~~v~~~g~~~~~~~~W~~IA~~lpgRt~~qcr~Rw~~~L~p~l 56 (86)
T d1igna1 2 ASFTDEEDEFILDVVRKNPTRRTTHTLYDEISHYVPNHTGNSIRHRFRVYLSKRL 56 (86)
T ss_dssp CCCCHHHHHHHHHHHHTSGGGTTCSHHHHHHTTTSTTSCHHHHHHHHHHTTGGGC
T ss_pred CCCCHHHHHHHHHHHHHhCcCcCCccCHHHHHHHcCCCCHHHHHHHHHHHcCccc
Confidence 469999999999999999864 345689999999999999999999887776654
No 14
>d1w0ta_ a.4.1.4 (A:) DNA-binding domain of human telomeric protein, hTRF1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.53 E-value=8e-05 Score=50.14 Aligned_cols=46 Identities=28% Similarity=0.354 Sum_probs=39.2
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcC--CCCHHHHHHHHHhhc
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLK--DKTVRDVALRCRWMT 109 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp--~KTvrDVAlR~rwm~ 109 (255)
..||.||...|-+++.+|... .|.+||..++ ++|..||.-|.+=|.
T Consensus 3 ~~WT~eED~~L~~~v~~~G~~----~W~~I~~~~~~~~Rt~~q~r~Rw~nl~ 50 (52)
T d1w0ta_ 3 QAWLWEEDKNLRSGVRKYGEG----NWSKILLHYKFNNRTSVMLKDRWRTMK 50 (52)
T ss_dssp CCCCHHHHHHHHHHHHHHCTT----CHHHHHHHSCCSSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCC----CHHHHHhhcCCCCCCHHHHHHHHHHHH
Confidence 479999999999999999654 6999999866 899999888877654
No 15
>d1w0ua_ a.4.1.4 (A:) Telomeric repeat binding factor 2, TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.47 E-value=7.9e-05 Score=50.64 Aligned_cols=48 Identities=27% Similarity=0.423 Sum_probs=41.1
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHH--cCCCCHHHHHHHHHhhccc
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQ--LKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~--Lp~KTvrDVAlR~rwm~~k 111 (255)
..||.||...|.++..+|.. ..|.+||.. ++++|..||.-|++=|.+.
T Consensus 3 ~~WT~eEd~~L~~~V~~~G~----~~W~~I~~~~~~~~Rt~~q~k~Rwrn~~k~ 52 (55)
T d1w0ua_ 3 QKWTVEESEWVKAGVQKYGE----GNWAAISKNYPFVNRTAVMIKDRWRTMKRL 52 (55)
T ss_dssp CCCCHHHHHHHHHHHHHHCT----TCHHHHHHHSCCSSCCHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhCC----ChHHHHHhhcCCCCcCHHHHHHHHHHHhcC
Confidence 47999999999999999953 369999998 5699999999998877654
No 16
>d2ckxa1 a.4.1.3 (A:578-660) Telomere binding protein TBP1 {Tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=96.83 E-value=0.00094 Score=48.51 Aligned_cols=46 Identities=11% Similarity=0.234 Sum_probs=40.2
Q ss_pred CCCHHHHHHHHHHHhhhcCCchhhHHHHHHHH----cCCCCHHHHHHHHHhhcc
Q 025253 61 EWTPEEQSILEDLLAKYASDSAVNRYAKIAKQ----LKDKTVRDVALRCRWMTK 110 (255)
Q Consensus 61 ~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~----Lp~KTvrDVAlR~rwm~~ 110 (255)
.||.||..+|.++..+|... +|.+||.. ++++|..||--|.+=|.+
T Consensus 2 ~WT~eEd~~L~~~V~~~G~~----~W~~I~~~~~~~~~~Rt~~qck~RWrn~l~ 51 (83)
T d2ckxa1 2 PFSVAEVEALVEAVEHLGTG----RWRDVKMRAFDNADHRTYVDLKDKWKTLVH 51 (83)
T ss_dssp CCCHHHHHHHHHHHHHHCSS----CHHHHHHHHCTTCTTSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCcc----cHHHHHHHHHhhccCCCHHHHHHHHHHHhh
Confidence 59999999999999999643 69999975 799999999999887764
No 17
>d1irza_ a.4.1.11 (A:) Arr10-B {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.26 E-value=0.0041 Score=43.74 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=39.9
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHH--HHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIA--KQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA--~~Lp~KTvrDVAlR~rwm~~k 111 (255)
...||.||...|.+|+..|..+...- .+|. ..+|+.|..+|+.+.|.+.-+
T Consensus 7 R~~WT~elH~~Fv~Av~~lG~~~atp--k~I~~~m~v~~lT~~qV~SHlQKYrl~ 59 (64)
T d1irza_ 7 RVLWTHELHNKFLAAVDHLGVERAVP--KKILDLMNVDKLTRENVASHLQKFRVA 59 (64)
T ss_dssp SCSSCHHHHHHHHHHHHHHCTTTCCH--HHHHHHHCCTTCCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHhCccccch--HHHHHHcCCCCCCHHHHHHHHHHHHHH
Confidence 46799999999999999998763111 3343 348999999999999988643
No 18
>d1wgxa_ a.4.1.3 (A:) Hypothetical protein C14orf106 (KIAA1903) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.11 E-value=0.0065 Score=43.77 Aligned_cols=47 Identities=13% Similarity=0.261 Sum_probs=42.0
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHH
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCR 106 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~r 106 (255)
..+|+.+|..+|+.+|+.+|+.. .-=|.+||+.++.+|..+|-..|.
T Consensus 8 d~~W~e~ELqkLh~A~~SlPkh~-~gfW~~VA~~VGtRSaeECQ~ky~ 54 (73)
T d1wgxa_ 8 DKEWNEKELQKLHCAFASLPKHK-PGFWSEVAAAVGSRSPEECQRKYM 54 (73)
T ss_dssp SSCCCHHHHHHHHHHHHHSCSSS-SSHHHHHHHHTTTSCHHHHHHHHH
T ss_pred ccccCHHHHHHHHHHHHhcCCCC-CccHHHHHHHHccCCHHHHHHHHH
Confidence 46899999999999999999996 357999999999999999877664
No 19
>d1ofcx1 a.4.1.3 (X:799-850) SANT domain of the nucleosome remodeling ATPase ISWI {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=94.13 E-value=0.025 Score=38.25 Aligned_cols=39 Identities=28% Similarity=0.411 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHH
Q 025253 61 EWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVAL 103 (255)
Q Consensus 61 ~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAl 103 (255)
.|+.-|-..|-.|+.+|..+. |.+||..+.+||..||..
T Consensus 1 ~WnrrdF~~Fi~a~ekyGR~d----~~~Ia~e~~~Kt~eEV~~ 39 (52)
T d1ofcx1 1 AWTKRDFNQFIKANEKYGRDD----IDNIAKDVEGKTPEEVIE 39 (52)
T ss_dssp TCCHHHHHHHHHHHHHHCTTC----HHHHTTSSTTCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhh----HHHHHHHhcCCCHHHHHH
Confidence 499999999999999999875 689999999999999863
No 20
>d1wh7a_ a.4.1.1 (A:) ZF-HD homeobox protein At4g24660 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=77.85 E-value=4.8 Score=27.88 Aligned_cols=51 Identities=10% Similarity=0.214 Sum_probs=38.3
Q ss_pred CCCCCCCHHHHHHHHHHHhhhc---CCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 57 GISTEWTPEEQSILEDLLAKYA---SDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 57 ~~~~~WT~eEq~~LE~~L~ky~---~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
...+.+|.++..+|+..+.+-. ..+.......||..|+ -+.+.|-. |+.++
T Consensus 19 R~Rt~ft~~Q~~~L~~~fe~~~~~~~~p~~~~~~~la~~~g-l~~~~i~v---WFqN~ 72 (80)
T d1wh7a_ 19 RFRTKFTAEQKEKMLAFAERLGWRIQKHDDVAVEQFCAETG-VRRQVLKI---WMHNN 72 (80)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTSCCCSSTTHHHHHHHHHSC-CCHHHHHH---HHHTT
T ss_pred CccccCCHHHHHHHHHHHHHhcccccCcCHHHHHHHHHHHC-CCHHHeee---ecccC
Confidence 4678999999999999888621 1123456778999997 88888854 88765
No 21
>d1ig7a_ a.4.1.1 (A:) Msx-1 homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=72.43 E-value=3.7 Score=26.72 Aligned_cols=48 Identities=19% Similarity=0.315 Sum_probs=38.7
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.||.++..+||..... ...++...-..||..|+ -|.+.|.. |+.++
T Consensus 4 Rt~ft~~Ql~~Le~~F~~-~~yP~~~~r~~LA~~l~-l~~~~V~~---WFqNr 51 (58)
T d1ig7a_ 4 RTPFTTAQLLALERKFRQ-KQYLSIAERAEFSSSLS-LTETQVKI---WFQNR 51 (58)
T ss_dssp CCCCCHHHHHHHHHHHHH-CSCCCHHHHHHHHHHTT-CCHHHHHH---HHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHhC-CChhheee---cCcch
Confidence 467999999999999876 44456778899999997 89999864 77754
No 22
>d1pufa_ a.4.1.1 (A:) Homeobox protein hox-a9 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=67.64 E-value=9.2 Score=26.34 Aligned_cols=50 Identities=20% Similarity=0.255 Sum_probs=39.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 57 GISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 57 ~~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
...+.+|.++..+||......+ .++......||..|+ -|.+.|-. |+..+
T Consensus 15 r~Rt~ft~~Ql~~Le~~F~~~~-yPs~~~r~~LA~~l~-l~~~qV~i---WFqNr 64 (77)
T d1pufa_ 15 KKRCPYTKHQTLELEKEFLFNM-YLTRDRRYEVARLLN-LTERQVKI---WFQNR 64 (77)
T ss_dssp CCCCCCCHHHHHHHHHHHHHCS-SCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHhC-CCHHHhhh---hhhhh
Confidence 3468899999999999998866 445677789999996 99999853 66544
No 23
>d1uhsa_ a.4.1.1 (A:) Homeodomain-only protein, Hop {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.83 E-value=8.2 Score=26.39 Aligned_cols=50 Identities=18% Similarity=0.209 Sum_probs=40.7
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..+.-|.++..+||....+.+..|+..+-..||..|+ -+.+.|-. |+..+
T Consensus 4 ~r~~fT~~Ql~~Le~~F~~~n~yP~~~~r~~LA~~lg-L~~~~Vqv---WFqNr 53 (72)
T d1uhsa_ 4 GAATMTEDQVEILEYNFNKVNKHPDPTTLCLIAAEAG-LTEEQTQK---WFKQR 53 (72)
T ss_dssp CCCCCCHHHHHHHHHHHHSSCSSCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHccccCCHHHHHHHHHHhC-CCHHHHHH---HHHHH
Confidence 3567899999999999988777677788899999996 89999853 66654
No 24
>d1jgga_ a.4.1.1 (A:) Even-skipped homeodomain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=61.59 E-value=9.9 Score=24.51 Aligned_cols=48 Identities=21% Similarity=0.338 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.+|.++..+||..... ...++...-..||..|+ -|.+.|.. |..++
T Consensus 3 Rt~fT~~Ql~~Le~~F~~-~~yp~~~~r~~LA~~lg-l~~~qV~v---WFqNr 50 (57)
T d1jgga_ 3 RTAFTRDQLGRLEKEFYK-ENYVSRPRRCELAAQLN-LPESTIKV---WFQNR 50 (57)
T ss_dssp CCCCCHHHHHHHHHHHHH-CSCCCHHHHHHHHHHHT-SCHHHHHH---HHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHhC-CChhHhhh---cchhh
Confidence 367899999999999886 44455677789999996 89998876 77665
No 25
>d1vnda_ a.4.1.1 (A:) VND/NK-2 protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=58.97 E-value=9.9 Score=26.08 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=39.4
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..+.+|.++..+||.....-+ .++...-..||..|+ -|.+.|- -|+.++
T Consensus 12 ~Rt~ft~~Q~~~Le~~F~~~~-yP~~~~r~~LA~~l~-l~~~qV~---~WFqNr 60 (77)
T d1vnda_ 12 RRVLFTKAQTYELERRFRQQR-YLSAPEREHLASLIR-LTPTQVK---IWFQNH 60 (77)
T ss_dssp SCCCCCTTHHHHHHHHHHHCS-CCCHHHHHHHHHHHT-CCHHHHH---HHHHHS
T ss_pred CCCCCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHhC-CChhhhh---hcchhH
Confidence 467899999999999988743 456778899999996 8999993 377765
No 26
>d1wi3a_ a.4.1.1 (A:) DNA-binding protein SATB2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=58.96 E-value=6.1 Score=26.56 Aligned_cols=49 Identities=12% Similarity=0.205 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.-|.++..+||....+....+....-..||..|+ -+.+.| --|+.++
T Consensus 11 R~~~t~~Q~~~Le~~F~~~~~~P~~~~~~~La~~lg-l~~~qV---~~WFqNr 59 (71)
T d1wi3a_ 11 RTKISLEALGILQSFIHDVGLYPDQEAIHTLSAQLD-LPKHTI---IKFFQNQ 59 (71)
T ss_dssp CCCCCSHHHHHHHHHHHHHCSCCCHHHHHHHHHHSC-CCHHHH---HHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhC-CCHHHH---HHHhHhh
Confidence 456789999999999975444444556777999997 899998 4577765
No 27
>d1au7a1 a.4.1.1 (A:103-160) Pit-1 POU homeodomain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=58.84 E-value=11 Score=24.46 Aligned_cols=48 Identities=17% Similarity=0.307 Sum_probs=38.6
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.||.+...+||....+ ...|+......||..|+ -+.+.|-. |+.++
T Consensus 3 Rt~~s~~q~~~Le~~F~~-~~~P~~~~~~~La~~l~-l~~~~V~~---WFqNr 50 (58)
T d1au7a1 3 RTTISIAAKDALERHFGE-HSKPSSQEIMRMAEELN-LEKEVVRV---WFCNR 50 (58)
T ss_dssp CCCCCHHHHHHHHHHHHH-CSSCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-ccCCCHHHHHHHHHHhC-CCHHHHHH---HHHHH
Confidence 467999999999999987 44456788899999997 88888865 66654
No 28
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=57.76 E-value=11 Score=24.26 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=38.1
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.++.+...+||...... ..|+......||..|+ -+.+.|.. |+.++
T Consensus 2 RT~~~~~q~~~Le~~F~~~-~~P~~~~~~~LA~~lg-L~~~qV~~---WFqNr 49 (57)
T d1e3oc1 2 RTSIETNIRVALEKSFMEN-QKPTSEDITLIAEQLN-MEKEVIRV---WFSNR 49 (57)
T ss_dssp CCCCCHHHHHHHHHHHHHC-SSCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCCCHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHC-CCHHHHHH---HHHHH
Confidence 3678999999999999984 4466788999999996 88888864 55543
No 29
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=56.88 E-value=2.3 Score=31.70 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=22.1
Q ss_pred HHhccchhhhhcCCCCccccchhhhhccCC
Q 025253 218 NDLNDMPEIMKQMPPLPVKVNDDLANSFLP 247 (255)
Q Consensus 218 n~m~~mpgiM~qMPPLPVklNe~La~siLP 247 (255)
|.=.++-|||-|+| ||-.||++-+-+.++
T Consensus 86 N~d~~v~GIlvqlP-LP~~i~~~~i~~~I~ 114 (121)
T d1b0aa2 86 NADNTIDGILVQLP-LPAGIDNVKVLERIH 114 (121)
T ss_dssp HTCTTCCEEEECSS-CCTTSCHHHHHTTSC
T ss_pred hCCCchhhhhhcCC-CCCCcCHHHHHhccC
Confidence 33347789999998 999999887555543
No 30
>d1p7ia_ a.4.1.1 (A:) Engrailed Homeodomain {Drosophila melanogaster [TaxId: 7227]}
Probab=52.29 E-value=14 Score=23.31 Aligned_cols=48 Identities=13% Similarity=0.270 Sum_probs=37.6
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.+|.++..+||.....-+ .++...-..||..|+ -|.+.|-. |..++
T Consensus 3 Rt~ft~~Q~~~Le~~F~~~~-yp~~~~r~~LA~~lg-L~~~qV~v---WFqNr 50 (53)
T d1p7ia_ 3 RTAFSSEQLARLKREFNENR-YLTERRRQQLSSELG-LNEAQIKI---WFQNA 50 (53)
T ss_dssp CCCCCHHHHHHHHHHHHHCS-SCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CccCCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHhC-CChHHhhh---ccccc
Confidence 35689999999999988754 455677788999998 88888854 77653
No 31
>d1x58a1 a.4.1.1 (A:8-56) Hypothetical protein 4930532d21rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=52.27 E-value=10 Score=24.47 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=35.3
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhh
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWM 108 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm 108 (255)
.+||.||..-|-.|..+|...=+..-|.= -.-|+++.-|.|..++.|
T Consensus 2 knft~eEv~YL~~GVK~~G~~WNsILWs~--PF~~GR~~vdLA~Ky~~l 48 (49)
T d1x58a1 2 KDFTKEEVNYLFHGVKTMGNHWNSILWSF--PFQKGRRAVDLAHKYHRL 48 (49)
T ss_dssp SSCCHHHHHHHHHHHHHHCSCHHHHHHHS--CCCTTCCHHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHhcchhhhhhhcc--CCCCCchhhHHHHHHHhh
Confidence 57999999999999999988732222210 334688999999988876
No 32
>d1bw5a_ a.4.1.1 (A:) Insulin gene enhancer protein isl-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=51.25 E-value=16 Score=24.18 Aligned_cols=49 Identities=12% Similarity=0.152 Sum_probs=38.5
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..+.||.++..+||.....-+ .|+......||..|+ -+.+.|- -|+.++
T Consensus 6 ~Rt~~t~~Q~~~Le~~F~~n~-~Ps~~~~~~LA~~l~-l~~~~V~---~WFqNr 54 (66)
T d1bw5a_ 6 VRTVLNEKQLHTLRTCYAANP-RPDALMKEQLVEMTG-LSPRVIR---VWFQNK 54 (66)
T ss_dssp CCCCCSHHHHHHHHHHHHHCS-CCCHHHHHHHHHHHT-SCHHHHH---HHHHHH
T ss_pred CCcCcCHHHHHHHHHHHHHCC-CCCHHHHHHHHHHcC-cCHHHhh---hhhHhH
Confidence 457899999999999998744 566778889999997 7888873 366543
No 33
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=50.21 E-value=8.8 Score=23.92 Aligned_cols=43 Identities=14% Similarity=0.164 Sum_probs=33.9
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHH
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVAL 103 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAl 103 (255)
.+.+|.++..+||..... ...++...-..||..|+ -+.+.|..
T Consensus 2 Rt~ft~~Q~~~Le~~F~~-n~~P~~~~~~~LA~~l~-l~~~~V~~ 44 (50)
T d1s7ea1 2 RLVFTDVQRRTLHAIFKE-NKRPSKELQITISQQLG-LELSTVSN 44 (50)
T ss_dssp CSCCCHHHHHHHHHHTTS-SCSSTHHHHHHHHTTSC-SSSHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHC-cCHHHhhh
Confidence 367899999999998864 44566788899999998 77777753
No 34
>d1lfba_ a.4.1.1 (A:) Hepatocyte nuclear factor 1a (LFB1/HNF1) {Rat (Rattus rattus) [TaxId: 10117]}
Probab=47.08 E-value=13 Score=25.73 Aligned_cols=33 Identities=15% Similarity=0.356 Sum_probs=26.9
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHc
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQL 93 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~L 93 (255)
..||.++..+||+.... ...|+...-..||..|
T Consensus 2 ~~~tp~Ql~~Le~~F~~-n~yPs~~~Re~LA~~l 34 (78)
T d1lfba_ 2 FKWGPASQQILFQAYER-QKNPSKEERETLVEEC 34 (78)
T ss_dssp CCCCHHHHHHHHHHHTT-CSSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHh-CCCCCHHHHHHHHHHh
Confidence 47999999999998877 3445677888899888
No 35
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=46.54 E-value=6.2 Score=25.89 Aligned_cols=49 Identities=22% Similarity=0.344 Sum_probs=37.6
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
+..++.|...+||+...+....++......||..|+ -|.+.|. .|+..+
T Consensus 5 ~~~~k~~~~~iLE~~F~~~~~yPs~~~~~~LA~~lg-ls~~qV~---~WFqNr 53 (59)
T d2cqxa1 5 SPVNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQLD-WSVRKIQ---CWFRHR 53 (59)
T ss_dssp CCCSCSCSTTHHHHHHHHTCSSCCHHHHHHHHHHTT-CCHHHHH---HHHHHH
T ss_pred CCCCCccccHHHHHHHHHcCCCcCHHHHHHHHHHHC-cCHHHHH---HHHHhh
Confidence 355677788899999987655666678889999996 8999886 466654
No 36
>d1fs1b1 a.157.1.1 (B:86-140) Cyclin A/CDK2-associated p45, Skp1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.00 E-value=5.4 Score=26.18 Aligned_cols=18 Identities=22% Similarity=0.370 Sum_probs=15.7
Q ss_pred HHHHHHHHcCCCCHHHHH
Q 025253 85 RYAKIAKQLKDKTVRDVA 102 (255)
Q Consensus 85 Ry~KIA~~Lp~KTvrDVA 102 (255)
=+++||.++.+||+.+|-
T Consensus 34 ~c~~vA~~ikgKt~eeiR 51 (55)
T d1fs1b1 34 TCKTVANMIKGKTPEEIR 51 (55)
T ss_dssp HHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHcCCCHHHHH
Confidence 478999999999999873
No 37
>d1zq3p1 a.4.1.1 (P:2-68) Homeotic bicoid protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=45.21 E-value=17 Score=24.04 Aligned_cols=48 Identities=19% Similarity=0.315 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.+|.++..+||.....- ..++..+-..||..|+ -+.+.|-. |+.++
T Consensus 5 Rt~ft~~Ql~~Le~~F~~~-~yp~~~~r~~LA~~l~-l~~~~V~i---WFqNr 52 (67)
T d1zq3p1 5 RTTFTSSQIAELEQHFLQG-RYLTAPRLADLSAKLA-LGTAQVKI---WFKNR 52 (67)
T ss_dssp SCCCCHHHHHHHHHHHTTC-SSCCHHHHHHHHHHHT-SCHHHHHH---HHHHH
T ss_pred CCcCCHHHHHHHHHHHHHC-CCCCHHHHHHHHHHhC-CCccceee---ccccH
Confidence 4679999999999988763 3345678889999997 88998875 88764
No 38
>d2cufa1 a.4.1.1 (A:8-89) Homeobox-containing protein 1, HMBOX1 (Flj21616) {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.65 E-value=14 Score=25.40 Aligned_cols=49 Identities=16% Similarity=0.318 Sum_probs=35.9
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcC--------------CCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLK--------------DKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp--------------~KTvrDVAlR~rwm~~k 111 (255)
.+.||.++..+||..... ...|+...-..||..+. +-|...|. -|+.++
T Consensus 4 R~~ft~~Ql~~LE~~F~~-n~yP~~~~R~~LA~~~~~~~~~~~~~~~~~~~l~~~~V~---vWFqNR 66 (82)
T d2cufa1 4 RFTWRKECLAVMESYFNE-NQYPDEAKREEIANACNAVIQKPGKKLSDLERVTSLKVY---NWFANR 66 (82)
T ss_dssp SCCCCHHHHHHHHHHHHH-CSSCCHHHHHHHHHHHHHHHCCTTCCCCTTTCCCHHHHH---HHHHHH
T ss_pred CCCCCHHHHHHHHHHHHh-CCCCCHHHHHHHHHHhccccccccccchhccCCCHHHHH---HHHhhh
Confidence 467999999999999886 44566778888888763 35565553 577654
No 39
>d2ecca1 a.4.1.1 (A:1-76) Homeobox-leucine zipper protein Homez {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.57 E-value=33 Score=22.90 Aligned_cols=46 Identities=15% Similarity=0.284 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 61 EWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 61 ~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..|.|+..+||....+- ..++......||..|. -+.++|- .|+..+
T Consensus 9 r~T~eQ~~~Le~~F~~n-~~Ps~~~~~~La~~~g-L~~~qV~---~WF~Nr 54 (76)
T d2ecca1 9 RKTKEQLAILKSFFLQC-QWARREDYQKLEQITG-LPRPEII---QWFGDT 54 (76)
T ss_dssp CCCHHHHHHHHHHHHHC-SSCCHHHHHHHHHHTC-CCHHHHH---HHHHHH
T ss_pred CCCHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHc-cCHHHHH---HHHHHH
Confidence 46999999999998874 3556788999999997 8999885 477655
No 40
>d1fjla_ a.4.1.1 (A:) Paired protein {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=42.80 E-value=24 Score=23.10 Aligned_cols=49 Identities=12% Similarity=0.274 Sum_probs=38.9
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..+.+|.++..+||.....-+ .++...-..||..|+ -+.+.|.. |+..+
T Consensus 5 ~Rt~ft~~Q~~~Le~~F~~n~-yPs~~~r~~LA~~lg-l~~~~V~~---WFqNr 53 (65)
T d1fjla_ 5 SRTTFSASQLDELERAFERTQ-YPDIYTREELAQRTN-LTEARIQV---WFQNR 53 (65)
T ss_dssp CCCCCCHHHHHHHHHHHHHCS-SCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcC-CCChHHHHHHHHHhC-CCHHHhhH---hhhhH
Confidence 356799999999999998744 555677889999997 78888854 77654
No 41
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.23 E-value=12 Score=23.76 Aligned_cols=45 Identities=27% Similarity=0.532 Sum_probs=34.1
Q ss_pred CHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 63 TPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 63 T~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
|.+...+||....+....++...-..||..|+ -+.+.|- -|+..+
T Consensus 1 T~~q~~iLE~~F~~~~~~P~~~~~~~LA~~~~-ls~~qV~---~WFqNr 45 (52)
T d1x2ma1 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQLD-WDVRSIQ---RWFRQR 45 (52)
T ss_dssp SSCHHHHHHHHHHTTCSSCCHHHHHHHHHHHC-SCHHHHH---HHHHHH
T ss_pred ChhHHHHHHHHHHHcCCCcCHHHHHHHHHHHC-cCHHHHH---HHHHhh
Confidence 56788999999976544455567789999997 8999994 477664
No 42
>d2ecba1 a.4.1.1 (A:8-83) Zinc fingers and homeoboxes protein 1, ZHX1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.94 E-value=20 Score=24.12 Aligned_cols=44 Identities=23% Similarity=0.353 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 63 TPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 63 T~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
|.++..+||..+..-+ .+.......||..|+ -|.+.|-. |+..+
T Consensus 12 T~~Q~~~Le~~F~~~~-~P~~~~r~~LA~~l~-l~~~~V~~---WFqNr 55 (76)
T d2ecba1 12 TAEQLRVLQASFLNSS-VLTDEELNRLRAQTK-LTRREIDA---WFTEK 55 (76)
T ss_dssp CHHHHHHHHHHHHHCS-SCCHHHHHHHHHHTC-CCHHHHHH---HHHHH
T ss_pred CHHHHHHHHHHHHHCC-CCCHHHHHHHHHHhC-CCHHHHHH---hHHHH
Confidence 8999999999998754 456788899999996 89998865 88754
No 43
>d1b72a_ a.4.1.1 (A:) Homeobox protein hox-b1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.31 E-value=23 Score=24.70 Aligned_cols=50 Identities=22% Similarity=0.342 Sum_probs=38.3
Q ss_pred CCCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 57 GISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 57 ~~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
...+.+|.++..+||..+..-+ .++...-..||..|+ -+.+.|.. |+.++
T Consensus 29 r~Rt~ft~~Ql~~Le~~F~~n~-yPs~~~r~~LA~~l~-l~~~~V~v---WFqNr 78 (88)
T d1b72a_ 29 GLRTNFTTRQLTELEKEFHFNK-YLSRARRVEIAATLE-LNETQVKI---WFQNR 78 (88)
T ss_dssp -CCCCCCHHHHHHHHHHHTTCS-SCCHHHHHHHHHHHT-CCHHHHHH---HHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHhCC-CCchHHHHHHHHHcC-CCHHHeee---ccHhH
Confidence 3567899999999999987644 445667788999996 88988864 66544
No 44
>d2craa1 a.4.1.1 (A:7-64) Homeobox protein hox-b13 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.57 E-value=33 Score=22.03 Aligned_cols=48 Identities=15% Similarity=0.247 Sum_probs=38.0
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.+|.++..+||......+ .++..+-..||..|+ -|.+.|-. |+.++
T Consensus 5 Rt~ft~~Q~~~Le~~F~~~~-yp~~~~r~~LA~~l~-l~~~qV~v---WFqNr 52 (58)
T d2craa1 5 RIPYSKGQLRELEREYAANK-FITKDKRRKISAATS-LSERQITI---WFQNR 52 (58)
T ss_dssp CCCSCHHHHHHHHHHHHHCS-SCCHHHHHHHHHHTC-CCHHHHHH---HHHHH
T ss_pred CCCCCHHHHHHHHHHHhhcC-CCCHHHHHHHHHHcC-CCHHHeee---cccch
Confidence 46789999999999998753 455778889999997 88888864 65543
No 45
>d1le8a_ a.4.1.1 (A:) Mating type protein A1 Homeodomain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=40.26 E-value=37 Score=21.20 Aligned_cols=47 Identities=19% Similarity=0.388 Sum_probs=36.7
Q ss_pred CCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 60 TEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 60 ~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
+.-|.+...+||..... ...++......||..|+ -+.+.|.. |+.++
T Consensus 2 t~~s~~q~~~Le~~F~~-~~~P~~~~~~~LA~~lg-l~~~qV~~---WFqNr 48 (53)
T d1le8a_ 2 SSISPQARAFLEQVFRR-KQSLNSKEKEEVAKKCG-ITPLQVRV---WFINK 48 (53)
T ss_dssp CCCCHHHHHHHHHHHHH-CSCCCHHHHHHHHHHTT-SCHHHHHH---HHHHH
T ss_pred CCCCHHHHHHHHHHHHh-CCCCCHHHHHHHHHHHC-CCHHHHHH---HHHhh
Confidence 45689999999999976 44566788899999996 88998853 66544
No 46
>d2e1oa1 a.4.1.1 (A:8-64) Homeobox protein prh {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.03 E-value=48 Score=20.96 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHH
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVAL 103 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAl 103 (255)
.+.+|.++..+||.....- ..++...-..||..|+ -|.+.|-.
T Consensus 4 R~~ft~~Q~~~Le~~F~~n-~yp~~~~r~~LA~~l~-L~~~qV~~ 46 (57)
T d2e1oa1 4 QVRFSNDQTIELEKKFETQ-KYLSPPERKRLAKMLQ-LSERQVKT 46 (57)
T ss_dssp CCCCCHHHHHHHHHHHHHC-SSCCHHHHHHHHHHTT-CCHHHHHH
T ss_pred CccCCHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhC-CCHHHhhH
Confidence 4679999999999999873 3445567779999996 88988864
No 47
>d1edza2 c.58.1.2 (A:3-148) Tetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=33.84 E-value=8 Score=29.85 Aligned_cols=29 Identities=17% Similarity=0.225 Sum_probs=21.1
Q ss_pred HHHhccchhhhhcCCCCccccchhhhhccC
Q 025253 217 MNDLNDMPEIMKQMPPLPVKVNDDLANSFL 246 (255)
Q Consensus 217 Ln~m~~mpgiM~qMPPLPVklNe~La~siL 246 (255)
||.=.++-|||-|+| ||-.||++.+-..+
T Consensus 84 LN~D~~V~GIlvQlP-LP~~i~~~~i~~~I 112 (146)
T d1edza2 84 ANGDDSVNGIMVYFP-VFGNAQDQYLQQVV 112 (146)
T ss_dssp HHHCTTCCEEEECSC-SSSSHHHHHHTTTS
T ss_pred HhcchhhhhhhhcCC-CCcccCHHHHHHhc
Confidence 344446679999995 89999997654444
No 48
>d1nexa1 a.157.1.1 (A:116-185) Centromere DNA-binding protein complex Cbf3 subunit D, CBF3D {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.42 E-value=11 Score=25.51 Aligned_cols=17 Identities=6% Similarity=0.321 Sum_probs=15.4
Q ss_pred HHHHHHHHcCCCCHHHH
Q 025253 85 RYAKIAKQLKDKTVRDV 101 (255)
Q Consensus 85 Ry~KIA~~Lp~KTvrDV 101 (255)
=|.+||.++.+||+.++
T Consensus 35 ~c~~vA~~ikgkt~eei 51 (70)
T d1nexa1 35 GCKVVAEMIRGRSPEEI 51 (70)
T ss_dssp HHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHccCCHHHH
Confidence 47899999999999987
No 49
>d2cuea1 a.4.1.1 (A:7-74) Paired box protein pax6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.45 E-value=53 Score=21.49 Aligned_cols=43 Identities=16% Similarity=0.207 Sum_probs=33.5
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHH
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVAL 103 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAl 103 (255)
.+.||.++..+||.....- +.++...=..||..|+ -|.+.|-.
T Consensus 5 Rt~ft~~Ql~~Le~~F~~n-~yP~~~~r~~LA~~l~-L~~~~V~~ 47 (68)
T d2cuea1 5 RTSFTQEQIEALEKEFERT-HYPDVFARERLAAKID-LPEARIQV 47 (68)
T ss_dssp CCCSCHHHHHHHHHHHTTC-SSCCHHHHHHHHHHTT-CCHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHc-CCCCHHHHHHHHHHhC-cChhheee
Confidence 4679999999999988763 3455667778999998 77877764
No 50
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=29.15 E-value=19 Score=23.25 Aligned_cols=27 Identities=15% Similarity=0.218 Sum_probs=23.9
Q ss_pred HHHHHHHHcCCCCHHHHHHHHHhhcccc
Q 025253 85 RYAKIAKQLKDKTVRDVALRCRWMTKKE 112 (255)
Q Consensus 85 Ry~KIA~~Lp~KTvrDVAlR~rwm~~kE 112 (255)
-|..||..|+ .|...|.-|+++|.+..
T Consensus 21 s~~~iA~~lg-is~~tv~~Ri~~L~~~g 47 (63)
T d2cfxa1 21 SMRELGRKIK-LSPPSVTERVRQLESFG 47 (63)
T ss_dssp CHHHHHHHHT-CCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHC-cCHHHHHHHHHHHHHCC
Confidence 4889999997 99999999999998654
No 51
>d1yz8p1 a.4.1.1 (P:1-60) Pituitary homeobox 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.37 E-value=34 Score=21.85 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=34.2
Q ss_pred CCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 59 STEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 59 ~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
.+.||.++..+||..+..- ..++...-..||..|+ -+.+.|. -|+.++
T Consensus 5 Rt~ft~~Q~~~Le~~F~~~-~yP~~~~r~~LA~~l~-l~~~~V~---~WFqNr 52 (60)
T d1yz8p1 5 RTHFTSQQLQQLEATFQRN-RYPDMSTREEIAVWTN-LTEARVR---VWFKNR 52 (60)
T ss_dssp CCCCCHHHHHHHHHHHTTC-SSCCTTTTTHHHHHTT-SCHHHHH---HHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHc-CCCChHHHHHHHHHHC-CChHHHH---HHhHHH
Confidence 4679999999999888652 2344455677888887 8888884 355543
No 52
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.70 E-value=13 Score=27.42 Aligned_cols=29 Identities=24% Similarity=0.449 Sum_probs=18.9
Q ss_pred HHhccchhhhhcCCCCcc--ccchhh-hhccCC
Q 025253 218 NDLNDMPEIMKQMPPLPV--KVNDDL-ANSFLP 247 (255)
Q Consensus 218 n~m~~mpgiM~qMPPLPV--klNe~L-a~siLP 247 (255)
|.=.++-|||-|+| ||- .+|++- ++.|-|
T Consensus 88 N~d~~V~GIlvqlP-LP~~~~~~~~~i~~~I~p 119 (125)
T d1a4ia2 88 NEDSTVHGFLVQLP-LDSENSINTEEVINAIAP 119 (125)
T ss_dssp HHCTTCCEEEECSS-CCCSSCCCHHHHHHTSCG
T ss_pred hccCCcceEEEecC-CCCCCCcCHHHHHhcCCC
Confidence 34446679999998 555 488654 454444
No 53
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B (Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.65 E-value=40 Score=22.25 Aligned_cols=44 Identities=23% Similarity=0.385 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhcccccchHHHHHHHHHHHHHHHHhcc
Q 025253 175 ITGDILEQNAQMFNQISANFGTFQIRDNIDLLCKARENILSIMNDLND 222 (255)
Q Consensus 175 ~~~~LLEqNaqllnQI~aNl~t~q~qeNidLf~~~RdNI~~ILn~m~~ 222 (255)
.+.+++.+|=++|-.|=..|. +.|-+||..+++|=.+.|.-|++
T Consensus 13 ~lR~~vq~nP~~L~~lLqql~----~~NP~L~q~I~~nqe~Fl~llne 56 (58)
T d2f4mb1 13 QMRQIIQQNPSLLPALLQQIG----RENPQLLQQISQHQEHFIQMLNE 56 (58)
T ss_dssp HHHHHHHHCGGGHHHHHHHHH----HHCHHHHHHHHHSHHHHHHHHTS
T ss_pred HHHHHHHHCHHHHHHHHHHHH----hhCHHHHHHHHHCHHHHHHHHcC
Confidence 467899999999998888884 48999999999999888887765
No 54
>d1ocpa_ a.4.1.1 (A:) Oct-3 POU Homeodomain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.54 E-value=72 Score=20.83 Aligned_cols=49 Identities=20% Similarity=0.264 Sum_probs=37.6
Q ss_pred CCCCCCHHHHHHHHHHHhhhcCCchhhHHHHHHHHcCCCCHHHHHHHHHhhccc
Q 025253 58 ISTEWTPEEQSILEDLLAKYASDSAVNRYAKIAKQLKDKTVRDVALRCRWMTKK 111 (255)
Q Consensus 58 ~~~~WT~eEq~~LE~~L~ky~~e~~~~Ry~KIA~~Lp~KTvrDVAlR~rwm~~k 111 (255)
..+.+|.++..+||....+-+ .|+...-..||..|. -+.+.|- -|+..+
T Consensus 11 ~Rt~~t~~q~~~Le~~F~~n~-~P~~~~r~~La~~~~-l~~~~V~---~WFqNr 59 (67)
T d1ocpa_ 11 KRTSIENRVRWSLETMFLKCP-KPSLQQITHIANQLG-LEKDVVR---VWFCNR 59 (67)
T ss_dssp CCSSCCHHHHHHHHHHHSSCS-CCCHHHHHHHHHHHT-CCHHHHH---HHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHcc-CCCHHHHHHHHHHHc-CCHHHHH---HHhHHH
Confidence 457899999999999887633 355677789999995 7888886 476654
Done!