Query 025254
Match_columns 255
No_of_seqs 158 out of 2265
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 06:42:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/025254.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/025254hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwf_A Cyclohexanone monooxyge 100.0 2.6E-31 8.8E-36 234.4 22.1 210 7-230 8-222 (540)
2 4ap3_A Steroid monooxygenase; 100.0 2.5E-31 8.6E-36 234.9 20.7 210 7-230 21-235 (549)
3 3uox_A Otemo; baeyer-villiger 100.0 1.7E-31 6E-36 235.7 19.2 210 6-229 8-228 (545)
4 2xve_A Flavin-containing monoo 100.0 1.2E-30 4E-35 226.8 21.5 208 8-225 3-235 (464)
5 1w4x_A Phenylacetone monooxyge 100.0 9.3E-30 3.2E-34 225.2 22.7 208 6-227 15-227 (542)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 3.8E-29 1.3E-33 216.6 19.8 205 6-219 5-246 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 9.7E-29 3.3E-33 207.3 20.3 199 7-226 3-202 (357)
8 4gcm_A TRXR, thioredoxin reduc 99.9 3.6E-25 1.2E-29 182.9 15.0 182 1-226 2-184 (312)
9 3lzw_A Ferredoxin--NADP reduct 99.9 9.2E-25 3.1E-29 181.5 15.6 188 1-224 1-191 (332)
10 4b63_A L-ornithine N5 monooxyg 99.9 5.6E-24 1.9E-28 186.4 20.5 201 7-226 39-287 (501)
11 4a5l_A Thioredoxin reductase; 99.9 2.4E-24 8.2E-29 177.9 14.4 180 7-219 4-185 (314)
12 3f8d_A Thioredoxin reductase ( 99.9 6.2E-24 2.1E-28 175.7 15.9 177 7-224 15-191 (323)
13 2zbw_A Thioredoxin reductase; 99.9 9.2E-24 3.2E-28 175.9 16.1 185 6-224 4-189 (335)
14 3itj_A Thioredoxin reductase 1 99.9 6.6E-24 2.3E-28 176.7 13.6 184 6-224 21-210 (338)
15 2q7v_A Thioredoxin reductase; 99.9 2E-23 6.9E-28 173.3 16.4 177 7-219 8-185 (325)
16 3d1c_A Flavin-containing putat 99.9 7.7E-23 2.6E-27 172.5 19.0 187 7-223 4-202 (369)
17 2q0l_A TRXR, thioredoxin reduc 99.9 2.5E-23 8.4E-28 171.6 15.1 174 8-219 2-176 (311)
18 3ab1_A Ferredoxin--NADP reduct 99.9 3.8E-23 1.3E-27 174.0 16.5 185 7-224 14-200 (360)
19 3s5w_A L-ornithine 5-monooxyge 99.9 1.7E-23 5.8E-28 181.9 13.9 201 7-226 30-268 (463)
20 3fbs_A Oxidoreductase; structu 99.9 8.5E-23 2.9E-27 167.0 16.5 170 8-219 3-173 (297)
21 2a87_A TRXR, TR, thioredoxin r 99.9 7.4E-23 2.5E-27 170.6 13.8 178 6-223 13-191 (335)
22 1vdc_A NTR, NADPH dependent th 99.9 6.6E-23 2.2E-27 170.6 12.7 175 7-219 8-192 (333)
23 3r9u_A Thioredoxin reductase; 99.9 2E-22 7E-27 166.1 14.9 177 6-219 3-180 (315)
24 3cty_A Thioredoxin reductase; 99.9 2E-22 6.7E-27 166.9 14.3 174 6-219 15-188 (319)
25 1fl2_A Alkyl hydroperoxide red 99.9 1.8E-22 6.1E-27 166.4 13.3 175 8-219 2-177 (310)
26 1trb_A Thioredoxin reductase; 99.9 1.8E-22 6.1E-27 167.0 12.5 174 7-219 5-178 (320)
27 4fk1_A Putative thioredoxin re 99.9 5.3E-22 1.8E-26 163.3 15.0 175 6-219 5-180 (304)
28 1hyu_A AHPF, alkyl hydroperoxi 99.9 1.3E-21 4.3E-26 172.3 16.9 180 6-223 211-391 (521)
29 3klj_A NAD(FAD)-dependent dehy 99.9 3.1E-23 1.1E-27 175.9 1.0 172 6-225 8-184 (385)
30 3oc4_A Oxidoreductase, pyridin 99.8 2E-20 6.7E-25 162.1 14.9 176 8-225 3-185 (452)
31 3l8k_A Dihydrolipoyl dehydroge 99.8 1.6E-20 5.3E-25 163.4 13.2 188 7-226 4-211 (466)
32 1mo9_A ORF3; nucleotide bindin 99.8 5.1E-20 1.7E-24 162.2 15.0 193 5-225 41-252 (523)
33 3qfa_A Thioredoxin reductase 1 99.8 1.7E-20 5.8E-25 165.1 11.4 194 6-226 31-248 (519)
34 1xhc_A NADH oxidase /nitrite r 99.8 9.9E-22 3.4E-26 165.8 3.0 168 7-224 8-180 (367)
35 2bc0_A NADH oxidase; flavoprot 99.8 4.2E-21 1.4E-25 167.9 6.4 178 7-224 35-231 (490)
36 3kd9_A Coenzyme A disulfide re 99.8 3.7E-20 1.3E-24 160.3 12.0 174 7-225 3-186 (449)
37 3ntd_A FAD-dependent pyridine 99.8 7.4E-21 2.5E-25 169.2 7.7 180 8-226 2-190 (565)
38 1zk7_A HGII, reductase, mercur 99.8 1E-20 3.5E-25 164.6 7.7 192 6-224 3-213 (467)
39 3ics_A Coenzyme A-disulfide re 99.8 1E-20 3.6E-25 169.0 7.9 183 6-226 35-226 (588)
40 3urh_A Dihydrolipoyl dehydroge 99.8 1.7E-20 5.7E-25 164.2 8.6 195 7-226 25-237 (491)
41 1zmd_A Dihydrolipoyl dehydroge 99.8 1.9E-19 6.5E-24 156.9 15.2 193 6-224 5-215 (474)
42 3iwa_A FAD-dependent pyridine 99.8 2.6E-20 9E-25 162.2 9.1 185 7-224 3-197 (472)
43 1dxl_A Dihydrolipoamide dehydr 99.8 1.6E-19 5.5E-24 157.1 14.0 197 5-226 4-216 (470)
44 2hqm_A GR, grase, glutathione 99.8 3.3E-20 1.1E-24 161.8 8.9 198 1-226 5-224 (479)
45 2wpf_A Trypanothione reductase 99.8 1.6E-19 5.3E-24 158.1 13.1 197 6-226 6-233 (495)
46 1onf_A GR, grase, glutathione 99.8 7.7E-20 2.6E-24 160.3 11.0 192 7-226 2-215 (500)
47 3lxd_A FAD-dependent pyridine 99.8 2.7E-20 9.2E-25 159.6 7.8 175 6-225 8-190 (415)
48 3dgz_A Thioredoxin reductase 2 99.8 1.1E-19 3.9E-24 158.8 11.7 193 6-225 5-222 (488)
49 3dk9_A Grase, GR, glutathione 99.8 3.3E-20 1.1E-24 161.8 8.2 189 7-227 20-227 (478)
50 2gqw_A Ferredoxin reductase; f 99.8 1E-19 3.5E-24 155.6 11.0 175 1-225 1-183 (408)
51 4eqs_A Coenzyme A disulfide re 99.8 4.6E-20 1.6E-24 159.0 8.9 182 9-228 2-188 (437)
52 2eq6_A Pyruvate dehydrogenase 99.8 1.7E-19 5.9E-24 156.7 12.4 191 1-226 1-208 (464)
53 2vdc_G Glutamate synthase [NAD 99.8 5.2E-20 1.8E-24 159.2 8.9 166 6-225 121-304 (456)
54 2cdu_A NADPH oxidase; flavoenz 99.8 3.2E-20 1.1E-24 160.8 7.6 179 8-224 1-186 (452)
55 2qae_A Lipoamide, dihydrolipoy 99.8 4.4E-19 1.5E-23 154.3 14.6 195 7-226 2-213 (468)
56 2v3a_A Rubredoxin reductase; a 99.8 9.6E-20 3.3E-24 154.6 10.1 172 7-225 4-183 (384)
57 1ges_A Glutathione reductase; 99.8 2.4E-19 8.2E-24 155.2 12.5 187 6-226 3-206 (450)
58 1nhp_A NADH peroxidase; oxidor 99.8 4.1E-20 1.4E-24 159.9 7.5 177 8-224 1-186 (447)
59 2r9z_A Glutathione amide reduc 99.8 3.5E-19 1.2E-23 154.7 13.1 186 6-225 3-204 (463)
60 3dgh_A TRXR-1, thioredoxin red 99.8 5E-19 1.7E-23 154.6 13.7 193 6-226 8-225 (483)
61 1ebd_A E3BD, dihydrolipoamide 99.8 3.7E-19 1.3E-23 154.3 12.8 190 7-225 3-208 (455)
62 2yqu_A 2-oxoglutarate dehydrog 99.8 4.7E-19 1.6E-23 153.6 13.0 189 8-226 2-206 (455)
63 3ef6_A Toluene 1,2-dioxygenase 99.8 2.8E-20 9.5E-25 159.3 5.0 171 8-224 3-180 (410)
64 1ojt_A Surface protein; redox- 99.8 1.2E-18 4.1E-23 152.1 15.1 196 6-226 5-224 (482)
65 1v59_A Dihydrolipoamide dehydr 99.8 1.3E-19 4.3E-24 158.1 8.8 200 6-226 4-222 (478)
66 1lvl_A Dihydrolipoamide dehydr 99.8 1.2E-18 4E-23 151.2 14.6 185 7-225 5-209 (458)
67 4b1b_A TRXR, thioredoxin reduc 99.8 1.9E-19 6.5E-24 158.3 9.5 198 7-229 42-264 (542)
68 4dna_A Probable glutathione re 99.8 3.6E-19 1.2E-23 154.7 10.8 188 7-226 5-209 (463)
69 3ic9_A Dihydrolipoamide dehydr 99.8 5.8E-20 2E-24 160.7 5.8 191 7-226 8-213 (492)
70 1xdi_A RV3303C-LPDA; reductase 99.8 2.2E-19 7.7E-24 157.3 9.1 196 8-225 3-220 (499)
71 2a8x_A Dihydrolipoyl dehydroge 99.8 2.4E-19 8.3E-24 155.8 8.9 191 7-226 3-210 (464)
72 1q1r_A Putidaredoxin reductase 99.8 4.2E-19 1.5E-23 152.8 9.7 176 7-225 4-187 (431)
73 3cgb_A Pyridine nucleotide-dis 99.8 1.3E-19 4.4E-24 158.1 6.5 178 7-224 36-223 (480)
74 3o0h_A Glutathione reductase; 99.8 7.4E-19 2.5E-23 153.5 11.1 187 7-226 26-230 (484)
75 1cjc_A Protein (adrenodoxin re 99.8 2.7E-19 9.3E-24 155.0 8.1 161 6-219 5-199 (460)
76 1lqt_A FPRA; NADP+ derivative, 99.8 2E-19 6.9E-24 155.7 7.3 160 7-219 3-201 (456)
77 3lad_A Dihydrolipoamide dehydr 99.8 6.6E-18 2.2E-22 147.2 16.9 194 7-226 3-219 (476)
78 3fg2_P Putative rubredoxin red 99.8 1.5E-19 5.1E-24 154.4 6.3 173 7-225 1-180 (404)
79 3k30_A Histamine dehydrogenase 99.8 4.8E-20 1.7E-24 167.3 3.4 165 6-225 390-563 (690)
80 1fec_A Trypanothione reductase 99.8 4.1E-18 1.4E-22 148.9 13.7 193 7-226 3-229 (490)
81 1o94_A Tmadh, trimethylamine d 99.8 4.8E-19 1.6E-23 161.5 8.0 168 6-219 388-563 (729)
82 2x8g_A Thioredoxin glutathione 99.8 9.1E-18 3.1E-22 150.2 15.7 193 6-225 106-323 (598)
83 1ps9_A 2,4-dienoyl-COA reducta 99.8 7.6E-19 2.6E-23 159.0 7.3 149 6-213 372-521 (671)
84 2gag_A Heterotetrameric sarcos 99.7 1E-17 3.5E-22 156.8 12.9 180 7-223 128-320 (965)
85 1gte_A Dihydropyrimidine dehyd 99.7 4.7E-18 1.6E-22 160.0 7.9 167 7-224 187-371 (1025)
86 4g6h_A Rotenone-insensitive NA 99.7 6.6E-18 2.2E-22 147.8 6.6 183 7-227 42-271 (502)
87 3sx6_A Sulfide-quinone reducta 99.7 2.6E-17 9E-22 141.9 6.2 170 7-222 4-199 (437)
88 1m6i_A Programmed cell death p 99.6 1.3E-17 4.5E-22 145.8 -0.0 187 5-219 9-217 (493)
89 3h8l_A NADH oxidase; membrane 99.6 1.4E-16 4.9E-21 136.1 5.2 168 8-219 2-211 (409)
90 1y56_A Hypothetical protein PH 99.6 9.6E-16 3.3E-20 134.0 9.1 163 7-212 108-274 (493)
91 2gqf_A Hypothetical protein HI 99.6 1.5E-15 5E-20 129.4 6.6 134 7-151 4-170 (401)
92 3v76_A Flavoprotein; structura 99.5 2.3E-13 8E-18 116.3 12.5 133 6-152 26-190 (417)
93 3cgv_A Geranylgeranyl reductas 99.5 3.5E-13 1.2E-17 114.3 11.3 134 7-149 4-162 (397)
94 2ywl_A Thioredoxin reductase r 99.4 5.7E-13 2E-17 100.8 10.5 108 8-148 2-109 (180)
95 3oz2_A Digeranylgeranylglycero 99.4 1E-12 3.5E-17 111.1 12.6 134 7-149 4-162 (397)
96 3h28_A Sulfide-quinone reducta 99.4 8.7E-15 3E-19 125.9 -1.5 166 8-219 3-189 (430)
97 3nix_A Flavoprotein/dehydrogen 99.4 2.2E-12 7.6E-17 110.3 13.3 135 7-149 5-166 (421)
98 2qa1_A PGAE, polyketide oxygen 99.4 1.8E-12 6.2E-17 113.4 12.8 136 5-149 9-165 (500)
99 3ihg_A RDME; flavoenzyme, anth 99.4 3.5E-12 1.2E-16 112.6 13.6 135 6-149 4-183 (535)
100 2qa2_A CABE, polyketide oxygen 99.4 3E-12 1E-16 112.0 12.9 135 6-149 11-166 (499)
101 3rp8_A Flavoprotein monooxygen 99.4 1.3E-12 4.5E-17 111.4 10.2 131 6-150 22-182 (407)
102 3ces_A MNMG, tRNA uridine 5-ca 99.4 6.5E-13 2.2E-17 118.0 8.1 172 6-217 27-221 (651)
103 2bry_A NEDD9 interacting prote 99.4 6.2E-13 2.1E-17 116.3 7.8 139 6-151 91-232 (497)
104 3fmw_A Oxygenase; mithramycin, 99.4 2.4E-12 8.1E-17 114.3 11.6 134 7-149 49-207 (570)
105 3dje_A Fructosyl amine: oxygen 99.4 6.6E-12 2.3E-16 108.0 12.6 62 79-152 159-224 (438)
106 1yvv_A Amine oxidase, flavin-c 99.4 5.1E-12 1.7E-16 104.7 11.5 129 8-149 3-162 (336)
107 2xdo_A TETX2 protein; tetracyc 99.4 7.7E-12 2.6E-16 106.3 12.6 129 6-150 25-183 (398)
108 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 2.2E-12 7.5E-17 107.5 9.0 128 8-147 2-163 (342)
109 3e1t_A Halogenase; flavoprotei 99.3 1.1E-11 3.7E-16 108.9 13.4 142 1-150 1-173 (512)
110 3fpz_A Thiazole biosynthetic e 99.3 5.9E-14 2E-18 116.4 -1.0 151 6-219 64-216 (326)
111 2cul_A Glucose-inhibited divis 99.3 5.2E-12 1.8E-16 99.6 10.1 123 7-151 3-127 (232)
112 2r0c_A REBC; flavin adenine di 99.3 2.6E-11 8.8E-16 107.4 15.1 134 7-150 26-197 (549)
113 2i0z_A NAD(FAD)-utilizing dehy 99.3 5.2E-12 1.8E-16 109.1 9.9 133 7-151 26-193 (447)
114 2x3n_A Probable FAD-dependent 99.3 7.5E-12 2.6E-16 106.4 10.6 131 7-149 6-166 (399)
115 3alj_A 2-methyl-3-hydroxypyrid 99.3 7E-12 2.4E-16 105.9 10.2 125 7-149 11-160 (379)
116 3vrd_B FCCB subunit, flavocyto 99.3 9E-13 3.1E-17 112.2 4.6 116 7-162 2-119 (401)
117 2gmh_A Electron transfer flavo 99.3 2.4E-11 8.4E-16 108.2 14.0 138 7-149 35-217 (584)
118 2dkh_A 3-hydroxybenzoate hydro 99.3 3.2E-11 1.1E-15 108.5 14.4 147 1-150 26-212 (639)
119 3nlc_A Uncharacterized protein 99.3 2.2E-11 7.7E-16 107.1 12.6 132 7-149 107-277 (549)
120 3dme_A Conserved exported prot 99.3 2.5E-11 8.5E-16 101.7 12.1 63 78-149 147-209 (369)
121 1rp0_A ARA6, thiazole biosynth 99.3 3.6E-11 1.2E-15 97.6 12.6 136 7-149 39-191 (284)
122 3atr_A Conserved archaeal prot 99.3 1.1E-11 3.6E-16 107.3 9.9 136 7-150 6-163 (453)
123 2zxi_A TRNA uridine 5-carboxym 99.3 4E-12 1.4E-16 112.6 7.3 168 7-217 27-220 (637)
124 3hyw_A Sulfide-quinone reducta 99.3 1.1E-13 3.8E-18 119.0 -2.9 114 8-161 3-118 (430)
125 3i3l_A Alkylhalidase CMLS; fla 99.3 3.2E-11 1.1E-15 107.3 12.7 135 7-149 23-188 (591)
126 3c96_A Flavin-containing monoo 99.3 1E-10 3.5E-15 99.8 15.0 136 7-150 4-170 (410)
127 4hb9_A Similarities with proba 99.3 2.7E-11 9.3E-16 102.9 11.4 128 8-149 2-166 (412)
128 1k0i_A P-hydroxybenzoate hydro 99.3 1.2E-11 4E-16 105.0 8.6 134 8-150 3-164 (394)
129 2vou_A 2,6-dihydroxypyridine h 99.3 1.3E-11 4.5E-16 104.9 8.6 131 6-150 4-154 (397)
130 2uzz_A N-methyl-L-tryptophan o 99.2 5.3E-11 1.8E-15 100.0 11.7 62 80-154 148-209 (372)
131 1y0p_A Fumarate reductase flav 99.2 1.1E-10 3.8E-15 103.8 13.7 137 7-150 126-318 (571)
132 3ps9_A TRNA 5-methylaminomethy 99.2 5.4E-11 1.8E-15 107.8 11.8 61 78-150 414-474 (676)
133 1ryi_A Glycine oxidase; flavop 99.2 8.9E-11 3.1E-15 99.0 12.3 61 77-150 160-220 (382)
134 3cp8_A TRNA uridine 5-carboxym 99.2 1.2E-11 4.1E-16 109.9 6.7 172 6-217 20-215 (641)
135 1qo8_A Flavocytochrome C3 fuma 99.2 1.3E-10 4.6E-15 103.1 13.4 139 6-150 120-313 (566)
136 1pn0_A Phenol 2-monooxygenase; 99.2 1.9E-10 6.6E-15 103.8 14.4 139 7-150 8-231 (665)
137 1y56_B Sarcosine oxidase; dehy 99.2 1.6E-10 5.3E-15 97.5 12.7 59 78-149 146-205 (382)
138 3pvc_A TRNA 5-methylaminomethy 99.2 2.2E-10 7.4E-15 104.1 14.1 60 79-150 410-470 (689)
139 3nyc_A D-arginine dehydrogenas 99.2 9.1E-11 3.1E-15 98.8 9.9 59 78-149 151-209 (381)
140 2oln_A NIKD protein; flavoprot 99.2 1.6E-10 5.6E-15 98.0 11.4 57 80-149 152-208 (397)
141 3jsk_A Cypbp37 protein; octame 99.2 1.7E-10 5.7E-15 95.3 10.9 141 7-150 79-252 (344)
142 3da1_A Glycerol-3-phosphate de 99.2 2.6E-10 9E-15 101.1 12.4 65 79-149 168-232 (561)
143 2gf3_A MSOX, monomeric sarcosi 99.1 3.5E-10 1.2E-14 95.6 11.9 59 79-150 148-206 (389)
144 4at0_A 3-ketosteroid-delta4-5a 99.1 8E-10 2.7E-14 96.9 14.2 38 7-44 41-78 (510)
145 2e5v_A L-aspartate oxidase; ar 99.1 3.3E-11 1.1E-15 104.7 4.8 194 9-227 1-249 (472)
146 2qcu_A Aerobic glycerol-3-phos 99.1 3.9E-10 1.3E-14 98.7 11.6 65 79-150 147-211 (501)
147 2gag_B Heterotetrameric sarcos 99.1 5.8E-10 2E-14 94.7 11.7 60 78-149 171-230 (405)
148 2aqj_A Tryptophan halogenase, 99.1 2.1E-10 7E-15 101.3 9.0 62 78-150 162-223 (538)
149 2gjc_A Thiazole biosynthetic e 99.1 8.5E-10 2.9E-14 90.6 10.8 105 7-113 65-177 (326)
150 2wdq_A Succinate dehydrogenase 99.1 2.2E-09 7.7E-14 95.5 14.0 145 1-150 1-207 (588)
151 3c4n_A Uncharacterized protein 99.0 1.7E-10 5.9E-15 98.3 6.0 36 7-42 36-73 (405)
152 1d4d_A Flavocytochrome C fumar 99.0 3.4E-09 1.2E-13 94.2 14.0 137 7-150 126-318 (572)
153 2e4g_A Tryptophan halogenase; 99.0 9.5E-10 3.2E-14 97.3 9.6 62 78-150 191-253 (550)
154 2weu_A Tryptophan 5-halogenase 99.0 5.1E-10 1.8E-14 98.2 7.7 62 78-150 170-231 (511)
155 3kkj_A Amine oxidase, flavin-c 99.0 4.5E-10 1.5E-14 89.6 6.8 41 8-48 3-43 (336)
156 3k7m_X 6-hydroxy-L-nicotine ox 99.0 4.1E-09 1.4E-13 90.3 12.2 37 8-44 2-38 (431)
157 3ka7_A Oxidoreductase; structu 99.0 2E-09 7E-14 92.0 10.0 37 8-44 1-37 (425)
158 2pyx_A Tryptophan halogenase; 99.0 3.3E-09 1.1E-13 93.3 11.4 62 78-150 172-234 (526)
159 3nrn_A Uncharacterized protein 99.0 1.4E-09 4.8E-14 93.0 8.7 37 8-44 1-37 (421)
160 1chu_A Protein (L-aspartate ox 99.0 1.7E-09 5.8E-14 95.4 9.0 37 7-44 8-44 (540)
161 2h88_A Succinate dehydrogenase 98.9 9.1E-09 3.1E-13 92.0 13.2 66 80-151 154-219 (621)
162 1pj5_A N,N-dimethylglycine oxi 98.9 5.2E-09 1.8E-13 96.9 11.7 59 78-149 148-207 (830)
163 2rgh_A Alpha-glycerophosphate 98.9 9.9E-09 3.4E-13 91.1 12.4 39 6-44 31-69 (571)
164 2yqu_A 2-oxoglutarate dehydrog 98.9 7.7E-09 2.6E-13 89.4 11.4 100 7-153 167-266 (455)
165 1kf6_A Fumarate reductase flav 98.9 1.8E-08 6.3E-13 89.9 13.7 139 7-151 5-199 (602)
166 3i6d_A Protoporphyrinogen oxid 98.9 3.8E-09 1.3E-13 91.3 9.0 38 7-44 5-48 (470)
167 2v3a_A Rubredoxin reductase; a 98.9 1.4E-08 4.7E-13 85.8 12.1 97 7-147 145-241 (384)
168 2eq6_A Pyruvate dehydrogenase 98.9 1.6E-08 5.5E-13 87.6 12.0 107 6-154 168-274 (464)
169 1v59_A Dihydrolipoamide dehydr 98.9 2.9E-08 1E-12 86.2 13.0 107 7-153 183-289 (478)
170 1ebd_A E3BD, dihydrolipoamide 98.9 2.6E-08 8.9E-13 86.0 12.4 104 6-153 169-272 (455)
171 2bs2_A Quinol-fumarate reducta 98.8 5.1E-08 1.7E-12 87.8 14.3 37 6-42 4-40 (660)
172 1nhp_A NADH peroxidase; oxidor 98.8 1.1E-08 3.9E-13 88.1 9.6 101 6-153 148-248 (447)
173 1ges_A Glutathione reductase; 98.8 2.6E-08 8.9E-13 86.0 11.8 102 6-153 166-267 (450)
174 3gyx_A Adenylylsulfate reducta 98.8 2.2E-08 7.6E-13 90.1 11.6 69 80-153 165-237 (662)
175 2r9z_A Glutathione amide reduc 98.8 2.9E-08 9.9E-13 86.0 11.9 100 7-153 166-266 (463)
176 3c4a_A Probable tryptophan hyd 98.8 6.1E-10 2.1E-14 94.1 1.2 119 8-150 1-144 (381)
177 4b1b_A TRXR, thioredoxin reduc 98.8 2.5E-08 8.5E-13 87.8 11.4 102 5-154 221-322 (542)
178 3urh_A Dihydrolipoyl dehydroge 98.8 7.7E-08 2.6E-12 83.9 13.6 106 6-153 197-302 (491)
179 1lvl_A Dihydrolipoamide dehydr 98.8 2E-08 6.7E-13 86.9 9.6 102 6-154 170-271 (458)
180 3axb_A Putative oxidoreductase 98.8 1E-08 3.4E-13 88.4 7.6 33 7-39 23-56 (448)
181 1jnr_A Adenylylsulfate reducta 98.8 7E-08 2.4E-12 86.8 12.4 35 7-41 22-60 (643)
182 1zmd_A Dihydrolipoyl dehydroge 98.8 9E-08 3.1E-12 83.1 12.7 106 7-153 178-284 (474)
183 2a8x_A Dihydrolipoyl dehydroge 98.8 8.5E-08 2.9E-12 83.0 12.4 103 6-153 170-273 (464)
184 4gde_A UDP-galactopyranose mut 98.7 7.4E-09 2.5E-13 90.6 5.7 45 1-45 4-49 (513)
185 3ef6_A Toluene 1,2-dioxygenase 98.7 4.4E-08 1.5E-12 83.5 10.2 97 7-147 143-239 (410)
186 4gut_A Lysine-specific histone 98.7 1.5E-07 5.2E-12 86.1 14.1 38 7-44 336-373 (776)
187 3oc4_A Oxidoreductase, pyridin 98.7 1.2E-07 4E-12 81.9 12.6 102 6-154 146-247 (452)
188 1dxl_A Dihydrolipoamide dehydr 98.7 5.8E-08 2E-12 84.2 10.7 106 6-153 176-281 (470)
189 1ojt_A Surface protein; redox- 98.7 3.6E-08 1.2E-12 85.8 9.4 103 7-153 185-288 (482)
190 2qae_A Lipoamide, dihydrolipoy 98.7 1.1E-07 3.9E-12 82.3 12.5 105 6-153 173-278 (468)
191 3lxd_A FAD-dependent pyridine 98.7 1.1E-07 3.9E-12 81.0 12.3 98 7-147 152-249 (415)
192 1zk7_A HGII, reductase, mercur 98.7 9.2E-08 3.2E-12 82.9 11.6 94 7-147 176-269 (467)
193 3s5w_A L-ornithine 5-monooxyge 98.7 1.1E-07 3.8E-12 82.2 12.1 171 6-195 226-418 (463)
194 3cgb_A Pyridine nucleotide-dis 98.7 6.5E-08 2.2E-12 84.1 10.5 96 6-147 185-280 (480)
195 2e1m_A L-glutamate oxidase; L- 98.7 5.6E-08 1.9E-12 81.6 9.5 43 5-47 42-85 (376)
196 1onf_A GR, grase, glutathione 98.7 2E-07 6.8E-12 81.5 13.4 102 7-153 176-277 (500)
197 1xdi_A RV3303C-LPDA; reductase 98.7 1.1E-07 3.9E-12 83.0 11.8 97 6-147 181-277 (499)
198 2gqw_A Ferredoxin reductase; f 98.7 1.2E-07 4E-12 80.8 11.5 93 7-147 145-237 (408)
199 3ic9_A Dihydrolipoamide dehydr 98.7 1.7E-07 5.9E-12 81.7 12.7 105 6-154 173-277 (492)
200 3lad_A Dihydrolipoamide dehydr 98.7 1.8E-07 6.1E-12 81.3 12.5 104 6-153 179-282 (476)
201 1fec_A Trypanothione reductase 98.7 1.2E-07 4E-12 82.7 11.4 102 6-153 186-290 (490)
202 1mo9_A ORF3; nucleotide bindin 98.7 1.4E-07 4.8E-12 82.9 11.9 96 8-147 215-314 (523)
203 2wpf_A Trypanothione reductase 98.7 1.3E-07 4.5E-12 82.5 11.5 102 6-153 190-294 (495)
204 3dgh_A TRXR-1, thioredoxin red 98.7 4.6E-07 1.6E-11 78.8 14.7 102 6-147 186-287 (483)
205 3dk9_A Grase, GR, glutathione 98.7 3E-07 1E-11 79.9 13.4 110 6-153 186-295 (478)
206 3fg2_P Putative rubredoxin red 98.7 1.6E-07 5.4E-12 79.9 11.4 98 7-147 142-239 (404)
207 2bc0_A NADH oxidase; flavoprot 98.7 1E-07 3.4E-12 83.2 10.4 101 6-153 193-293 (490)
208 1q1r_A Putidaredoxin reductase 98.7 2.1E-07 7.2E-12 79.8 12.2 99 6-147 148-248 (431)
209 2hqm_A GR, grase, glutathione 98.7 1.6E-07 5.4E-12 81.7 11.5 104 6-153 184-287 (479)
210 2bcg_G Secretory pathway GDP d 98.7 2.1E-08 7.1E-13 86.7 5.9 46 1-46 5-50 (453)
211 3o0h_A Glutathione reductase; 98.7 1.6E-07 5.6E-12 81.7 11.5 97 6-147 190-286 (484)
212 3dgz_A Thioredoxin reductase 2 98.7 4.8E-07 1.6E-11 78.8 14.3 106 6-153 184-289 (488)
213 3iwa_A FAD-dependent pyridine 98.7 2E-07 6.8E-12 80.9 11.8 97 7-147 159-256 (472)
214 2cdu_A NADPH oxidase; flavoenz 98.7 1.6E-07 5.6E-12 81.0 11.2 101 6-153 148-249 (452)
215 4eqs_A Coenzyme A disulfide re 98.7 1.4E-07 4.9E-12 81.0 10.7 95 7-152 147-241 (437)
216 1v0j_A UDP-galactopyranose mut 98.7 2.1E-08 7.1E-13 85.2 5.3 47 1-47 1-48 (399)
217 3ntd_A FAD-dependent pyridine 98.7 2.7E-07 9.2E-12 81.8 12.7 98 7-147 151-265 (565)
218 1trb_A Thioredoxin reductase; 98.6 3.4E-07 1.2E-11 75.0 12.1 101 6-147 144-245 (320)
219 4dgk_A Phytoene dehydrogenase; 98.6 2.9E-08 9.9E-13 86.6 5.2 37 8-44 2-38 (501)
220 2zbw_A Thioredoxin reductase; 98.6 4.5E-07 1.5E-11 74.8 12.1 99 7-147 152-250 (335)
221 2b9w_A Putative aminooxidase; 98.6 7.1E-08 2.4E-12 82.4 6.8 45 1-46 1-46 (424)
222 3qfa_A Thioredoxin reductase 1 98.6 9.7E-07 3.3E-11 77.5 13.3 107 6-153 209-317 (519)
223 1m6i_A Programmed cell death p 98.5 6E-07 2.1E-11 78.3 11.6 97 7-147 180-280 (493)
224 1xhc_A NADH oxidase /nitrite r 98.5 2E-07 7E-12 78.2 8.2 93 7-152 143-235 (367)
225 4dna_A Probable glutathione re 98.5 8.5E-07 2.9E-11 76.7 11.3 97 6-147 169-266 (463)
226 3ab1_A Ferredoxin--NADP reduct 98.5 1.3E-06 4.6E-11 72.8 11.7 98 7-147 163-261 (360)
227 3ics_A Coenzyme A-disulfide re 98.5 9.1E-07 3.1E-11 78.8 11.2 95 6-147 186-280 (588)
228 3kd9_A Coenzyme A disulfide re 98.5 9.6E-07 3.3E-11 76.1 10.9 96 6-147 147-242 (449)
229 1fl2_A Alkyl hydroperoxide red 98.5 7.7E-07 2.6E-11 72.5 9.7 95 7-147 144-240 (310)
230 3hdq_A UDP-galactopyranose mut 98.4 2.2E-07 7.4E-12 78.6 6.1 43 6-48 28-70 (397)
231 3itj_A Thioredoxin reductase 1 98.4 2.2E-06 7.5E-11 70.5 12.1 97 6-147 172-269 (338)
232 2ivd_A PPO, PPOX, protoporphyr 98.4 1.9E-07 6.5E-12 81.0 5.7 39 6-44 15-53 (478)
233 3lzw_A Ferredoxin--NADP reduct 98.4 2.7E-06 9.1E-11 69.8 12.3 95 7-147 154-248 (332)
234 1sez_A Protoporphyrinogen oxid 98.4 2.2E-07 7.6E-12 81.1 5.9 40 7-46 13-52 (504)
235 2q7v_A Thioredoxin reductase; 98.4 1.4E-06 4.8E-11 71.6 10.4 96 7-147 152-247 (325)
236 1rsg_A FMS1 protein; FAD bindi 98.4 1.5E-07 5.2E-12 82.6 4.8 40 7-46 8-48 (516)
237 4dsg_A UDP-galactopyranose mut 98.4 4.1E-07 1.4E-11 79.1 7.2 43 6-48 8-51 (484)
238 1s3e_A Amine oxidase [flavin-c 98.4 1.9E-07 6.7E-12 81.9 5.2 39 7-45 4-42 (520)
239 2yg5_A Putrescine oxidase; oxi 98.4 2.5E-07 8.7E-12 79.6 5.8 40 7-46 5-44 (453)
240 3cty_A Thioredoxin reductase; 98.4 1.7E-06 5.7E-11 70.9 10.4 95 7-147 155-250 (319)
241 3d1c_A Flavin-containing putat 98.4 1.5E-06 5.2E-11 72.5 10.1 107 7-153 166-274 (369)
242 2q0l_A TRXR, thioredoxin reduc 98.4 1.5E-06 5E-11 70.9 9.3 98 6-147 142-239 (311)
243 1vdc_A NTR, NADPH dependent th 98.4 2.1E-06 7.3E-11 70.6 10.4 99 6-147 158-257 (333)
244 4g6h_A Rotenone-insensitive NA 98.4 1.2E-06 4.1E-11 76.5 9.0 99 8-147 218-330 (502)
245 3f8d_A Thioredoxin reductase ( 98.4 2.2E-06 7.4E-11 70.0 10.0 97 6-147 153-249 (323)
246 2jae_A L-amino acid oxidase; o 98.4 3.8E-07 1.3E-11 79.4 5.5 40 6-45 10-49 (489)
247 3nks_A Protoporphyrinogen oxid 98.3 3.2E-07 1.1E-11 79.5 4.8 37 8-44 3-41 (477)
248 3l8k_A Dihydrolipoyl dehydroge 98.3 2.9E-06 1E-10 73.4 10.8 105 6-154 171-275 (466)
249 2a87_A TRXR, TR, thioredoxin r 98.3 6.4E-07 2.2E-11 74.0 6.3 101 6-153 154-254 (335)
250 2vvm_A Monoamine oxidase N; FA 98.3 4.8E-07 1.6E-11 78.8 5.8 38 8-45 40-77 (495)
251 2iid_A L-amino-acid oxidase; f 98.3 4.8E-07 1.7E-11 78.9 4.9 40 6-45 32-71 (498)
252 2bi7_A UDP-galactopyranose mut 98.3 7.3E-07 2.5E-11 75.3 5.7 42 7-48 3-44 (384)
253 1i8t_A UDP-galactopyranose mut 98.3 6.3E-07 2.2E-11 75.2 5.2 39 8-46 2-40 (367)
254 1c0p_A D-amino acid oxidase; a 98.3 7.8E-07 2.7E-11 74.3 5.7 35 6-40 5-39 (363)
255 2x8g_A Thioredoxin glutathione 98.3 1.2E-05 4.1E-10 71.8 13.5 105 7-153 286-397 (598)
256 1d5t_A Guanine nucleotide diss 98.3 9E-07 3.1E-11 75.9 5.7 41 5-45 4-44 (433)
257 3ihm_A Styrene monooxygenase A 98.3 5.3E-07 1.8E-11 77.3 4.2 34 7-40 22-55 (430)
258 3klj_A NAD(FAD)-dependent dehy 98.3 6.2E-07 2.1E-11 75.7 4.4 84 7-147 146-229 (385)
259 3lov_A Protoporphyrinogen oxid 98.3 7.6E-07 2.6E-11 77.1 5.1 39 7-45 4-44 (475)
260 1b37_A Protein (polyamine oxid 98.2 1E-06 3.5E-11 76.3 5.6 43 6-48 3-46 (472)
261 4a5l_A Thioredoxin reductase; 98.2 5.5E-06 1.9E-10 67.5 9.7 102 6-153 151-252 (314)
262 3r9u_A Thioredoxin reductase; 98.2 5.4E-06 1.8E-10 67.4 9.3 97 6-147 146-242 (315)
263 3p1w_A Rabgdi protein; GDI RAB 98.2 1.5E-06 5E-11 75.1 5.4 40 6-45 19-58 (475)
264 1hyu_A AHPF, alkyl hydroperoxi 98.2 5.1E-06 1.8E-10 72.9 9.0 95 7-147 355-451 (521)
265 3fbs_A Oxidoreductase; structu 98.2 3.3E-06 1.1E-10 68.1 6.9 85 6-147 140-224 (297)
266 3k30_A Histamine dehydrogenase 98.2 9.3E-06 3.2E-10 73.7 10.3 98 7-147 523-622 (690)
267 3pl8_A Pyranose 2-oxidase; sub 98.1 1.9E-06 6.4E-11 77.2 4.9 40 6-45 45-84 (623)
268 3g3e_A D-amino-acid oxidase; F 98.1 1.6E-06 5.6E-11 72.0 3.4 34 8-41 1-40 (351)
269 2z3y_A Lysine-specific histone 98.1 4.2E-06 1.4E-10 75.6 6.0 40 6-45 106-145 (662)
270 2xag_A Lysine-specific histone 98.0 5.6E-06 1.9E-10 76.5 6.2 40 6-45 277-316 (852)
271 3g5s_A Methylenetetrahydrofola 98.0 8.2E-06 2.8E-10 68.3 5.5 35 8-42 2-36 (443)
272 4gcm_A TRXR, thioredoxin reduc 97.9 0.0001 3.5E-09 60.0 11.7 35 7-41 145-179 (312)
273 2xve_A Flavin-containing monoo 97.9 5.2E-05 1.8E-09 65.5 9.8 36 6-41 196-231 (464)
274 2gag_A Heterotetrameric sarcos 97.9 7E-05 2.4E-09 70.4 10.8 99 7-152 284-384 (965)
275 3gwf_A Cyclohexanone monooxyge 97.8 0.00011 3.9E-09 64.6 10.6 36 6-41 177-212 (540)
276 4a9w_A Monooxygenase; baeyer-v 97.8 3.2E-05 1.1E-09 63.9 6.7 34 6-40 162-195 (357)
277 1kdg_A CDH, cellobiose dehydro 97.8 2.2E-05 7.5E-10 69.3 5.1 36 6-41 6-41 (546)
278 1vg0_A RAB proteins geranylger 97.8 3.1E-05 1.1E-09 69.1 6.0 46 3-48 4-49 (650)
279 1ps9_A 2,4-dienoyl-COA reducta 97.8 0.00015 5.3E-09 65.5 10.7 124 6-146 493-625 (671)
280 2gv8_A Monooxygenase; FMO, FAD 97.8 8.9E-05 3E-09 63.7 8.7 35 6-40 211-246 (447)
281 2vdc_G Glutamate synthase [NAD 97.8 3.8E-05 1.3E-09 66.2 6.3 36 6-41 263-299 (456)
282 3t37_A Probable dehydrogenase; 97.7 2.1E-05 7.1E-10 69.0 4.5 35 7-41 17-52 (526)
283 1o94_A Tmadh, trimethylamine d 97.7 0.00013 4.4E-09 66.6 9.1 104 7-152 528-647 (729)
284 3q9t_A Choline dehydrogenase a 97.7 3.4E-05 1.2E-09 68.4 4.9 36 6-41 5-41 (577)
285 1lqt_A FPRA; NADP+ derivative, 97.7 0.00034 1.2E-08 60.3 10.9 36 7-42 147-203 (456)
286 1cjc_A Protein (adrenodoxin re 97.6 0.00048 1.7E-08 59.4 11.5 35 7-41 145-200 (460)
287 1ju2_A HydroxynitrIle lyase; f 97.6 2.9E-05 9.8E-10 68.4 3.7 35 7-42 26-60 (536)
288 3ayj_A Pro-enzyme of L-phenyla 97.6 1.7E-05 5.8E-10 71.6 2.3 36 7-42 56-100 (721)
289 3sx6_A Sulfide-quinone reducta 97.6 0.00012 4.2E-09 62.6 7.6 103 8-147 150-267 (437)
290 3h28_A Sulfide-quinone reducta 97.6 0.00014 4.8E-09 62.1 7.2 99 8-148 143-255 (430)
291 1n4w_A CHOD, cholesterol oxida 97.5 8.4E-05 2.9E-09 64.9 5.3 38 6-43 4-41 (504)
292 3qvp_A Glucose oxidase; oxidor 97.5 6.9E-05 2.4E-09 66.5 4.7 35 6-40 18-53 (583)
293 1gte_A Dihydropyrimidine dehyd 97.5 0.00046 1.6E-08 65.3 9.8 99 7-147 332-440 (1025)
294 1coy_A Cholesterol oxidase; ox 97.4 0.00011 3.8E-09 64.2 5.0 36 6-41 10-45 (507)
295 2g1u_A Hypothetical protein TM 97.4 0.00015 5.3E-09 52.7 4.9 40 1-40 13-52 (155)
296 3uox_A Otemo; baeyer-villiger 97.4 0.00023 7.9E-09 62.7 6.6 36 6-41 184-219 (545)
297 4g65_A TRK system potassium up 97.4 0.00057 1.9E-08 58.9 8.9 34 7-40 3-36 (461)
298 3fim_B ARYL-alcohol oxidase; A 97.4 8.4E-05 2.9E-09 65.7 3.2 36 7-42 2-38 (566)
299 3h8l_A NADH oxidase; membrane 97.4 0.00063 2.2E-08 57.6 8.5 52 81-148 218-269 (409)
300 4ap3_A Steroid monooxygenase; 97.3 0.00042 1.4E-08 61.1 6.7 35 7-41 191-225 (549)
301 1gpe_A Protein (glucose oxidas 97.3 0.00024 8.1E-09 63.2 4.9 36 7-42 24-60 (587)
302 2jbv_A Choline oxidase; alcoho 97.3 0.00023 7.9E-09 62.8 4.7 36 7-42 13-49 (546)
303 4b63_A L-ornithine N5 monooxyg 97.0 0.0019 6.3E-08 56.3 8.2 35 6-40 245-281 (501)
304 2ywl_A Thioredoxin reductase r 97.0 0.00059 2E-08 50.7 4.1 35 188-223 3-37 (180)
305 3fwz_A Inner membrane protein 97.0 0.0014 4.8E-08 46.7 5.6 35 6-40 6-40 (140)
306 3llv_A Exopolyphosphatase-rela 96.9 0.0011 3.7E-08 47.2 5.0 34 7-40 6-39 (141)
307 4fk1_A Putative thioredoxin re 96.9 0.0041 1.4E-07 50.2 8.6 88 7-147 146-234 (304)
308 1lss_A TRK system potassium up 96.8 0.0015 5.1E-08 46.1 4.7 34 7-40 4-37 (140)
309 1id1_A Putative potassium chan 96.7 0.0025 8.5E-08 46.0 5.4 34 7-40 3-36 (153)
310 3ic5_A Putative saccharopine d 96.7 0.0017 6E-08 44.3 4.2 34 7-40 5-39 (118)
311 2hmt_A YUAA protein; RCK, KTN, 96.7 0.0022 7.5E-08 45.4 4.7 34 7-40 6-39 (144)
312 3ado_A Lambda-crystallin; L-gu 96.6 0.0018 6E-08 52.9 4.5 39 1-40 1-39 (319)
313 3kkj_A Amine oxidase, flavin-c 96.6 0.0013 4.5E-08 51.4 3.4 32 188-219 4-35 (336)
314 2dpo_A L-gulonate 3-dehydrogen 96.4 0.0039 1.3E-07 51.0 5.0 39 1-40 1-39 (319)
315 3dfz_A SIRC, precorrin-2 dehyd 96.3 0.0047 1.6E-07 47.7 5.0 35 6-40 30-64 (223)
316 3c85_A Putative glutathione-re 96.3 0.0043 1.5E-07 46.2 4.5 34 7-40 39-73 (183)
317 2cul_A Glucose-inhibited divis 96.2 0.0035 1.2E-07 48.6 3.6 32 187-218 4-35 (232)
318 4dgk_A Phytoene dehydrogenase; 96.2 0.0024 8E-08 55.4 2.8 33 187-219 2-34 (501)
319 3l4b_C TRKA K+ channel protien 96.1 0.0052 1.8E-07 47.2 4.3 32 9-40 2-33 (218)
320 1kyq_A Met8P, siroheme biosynt 96.1 0.0044 1.5E-07 49.4 3.8 35 6-40 12-46 (274)
321 3g0o_A 3-hydroxyisobutyrate de 96.1 0.006 2E-07 49.4 4.6 40 1-40 1-40 (303)
322 4hb9_A Similarities with proba 96.1 0.0041 1.4E-07 52.1 3.8 33 187-219 2-34 (412)
323 1pzg_A LDH, lactate dehydrogen 96.0 0.0069 2.4E-07 49.8 4.8 34 7-40 9-43 (331)
324 3l6d_A Putative oxidoreductase 96.0 0.0094 3.2E-07 48.4 5.5 35 6-40 8-42 (306)
325 4e12_A Diketoreductase; oxidor 96.0 0.0077 2.6E-07 48.3 4.9 34 7-40 4-37 (283)
326 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0062 2.1E-07 52.1 4.3 37 7-43 5-41 (439)
327 3lk7_A UDP-N-acetylmuramoylala 95.9 0.0078 2.7E-07 51.7 4.9 35 6-40 8-42 (451)
328 1f0y_A HCDH, L-3-hydroxyacyl-C 95.9 0.009 3.1E-07 48.3 5.0 34 7-40 15-48 (302)
329 2ewd_A Lactate dehydrogenase,; 95.9 0.0078 2.7E-07 49.1 4.5 34 7-40 4-38 (317)
330 3hyw_A Sulfide-quinone reducta 95.8 0.057 1.9E-06 45.9 10.0 54 82-147 201-254 (430)
331 3pid_A UDP-glucose 6-dehydroge 95.8 0.0081 2.8E-07 51.1 4.6 34 6-40 35-68 (432)
332 3i83_A 2-dehydropantoate 2-red 95.8 0.0096 3.3E-07 48.6 4.7 33 8-40 3-35 (320)
333 3ihm_A Styrene monooxygenase A 95.8 0.0063 2.1E-07 51.9 3.7 35 185-219 21-55 (430)
334 2y0c_A BCEC, UDP-glucose dehyd 95.7 0.0094 3.2E-07 51.5 4.6 34 7-40 8-41 (478)
335 1yvv_A Amine oxidase, flavin-c 95.7 0.0067 2.3E-07 49.5 3.5 33 187-219 3-35 (336)
336 2raf_A Putative dinucleotide-b 95.7 0.012 4E-07 44.9 4.7 35 7-41 19-53 (209)
337 1t2d_A LDH-P, L-lactate dehydr 95.7 0.012 4.1E-07 48.1 5.0 34 7-40 4-38 (322)
338 3qha_A Putative oxidoreductase 95.7 0.0099 3.4E-07 48.0 4.4 35 7-41 15-49 (296)
339 3oz2_A Digeranylgeranylglycero 95.6 0.0068 2.3E-07 50.4 3.4 32 188-219 6-37 (397)
340 3ktd_A Prephenate dehydrogenas 95.6 0.014 4.8E-07 48.1 5.2 40 1-40 2-41 (341)
341 2bry_A NEDD9 interacting prote 95.6 0.012 4E-07 51.3 4.9 35 185-219 91-125 (497)
342 1ks9_A KPA reductase;, 2-dehyd 95.6 0.012 4E-07 47.1 4.7 33 9-41 2-34 (291)
343 4dio_A NAD(P) transhydrogenase 95.6 0.013 4.3E-07 49.3 4.9 36 6-41 189-224 (405)
344 3ghy_A Ketopantoate reductase 95.6 0.013 4.4E-07 48.2 4.9 33 8-40 4-36 (335)
345 3rp8_A Flavoprotein monooxygen 95.6 0.011 3.8E-07 49.7 4.5 35 185-219 22-56 (407)
346 1lld_A L-lactate dehydrogenase 95.6 0.013 4.3E-07 47.8 4.6 34 7-40 7-42 (319)
347 3hn2_A 2-dehydropantoate 2-red 95.6 0.011 3.7E-07 48.1 4.2 33 8-40 3-35 (312)
348 4a7p_A UDP-glucose dehydrogena 95.6 0.013 4.3E-07 50.2 4.7 35 7-41 8-42 (446)
349 2g1u_A Hypothetical protein TM 95.6 0.014 4.9E-07 42.1 4.5 38 182-219 15-52 (155)
350 2aef_A Calcium-gated potassium 95.5 0.0076 2.6E-07 46.7 3.1 37 4-41 6-42 (234)
351 1y6j_A L-lactate dehydrogenase 95.5 0.012 4.2E-07 48.0 4.4 35 6-40 6-42 (318)
352 2vou_A 2,6-dihydroxypyridine h 95.5 0.011 3.7E-07 49.7 4.2 34 186-219 5-38 (397)
353 2xdo_A TETX2 protein; tetracyc 95.5 0.013 4.4E-07 49.3 4.5 34 186-219 26-59 (398)
354 3k96_A Glycerol-3-phosphate de 95.5 0.017 5.8E-07 47.9 5.2 34 7-40 29-62 (356)
355 3doj_A AT3G25530, dehydrogenas 95.5 0.015 5.2E-07 47.2 4.8 36 6-41 20-55 (310)
356 3g79_A NDP-N-acetyl-D-galactos 95.5 0.012 4E-07 50.8 4.3 35 7-41 18-54 (478)
357 3gg2_A Sugar dehydrogenase, UD 95.5 0.013 4.4E-07 50.3 4.5 33 8-40 3-35 (450)
358 3oj0_A Glutr, glutamyl-tRNA re 95.5 0.0081 2.8E-07 42.8 2.8 34 7-40 21-54 (144)
359 1rp0_A ARA6, thiazole biosynth 95.4 0.011 3.8E-07 47.3 3.9 33 187-219 40-73 (284)
360 1zej_A HBD-9, 3-hydroxyacyl-CO 95.4 0.016 5.3E-07 46.8 4.5 33 7-40 12-44 (293)
361 3p2y_A Alanine dehydrogenase/p 95.4 0.013 4.3E-07 48.9 4.0 35 6-40 183-217 (381)
362 4ffl_A PYLC; amino acid, biosy 95.4 0.018 6E-07 47.8 4.9 35 8-42 2-36 (363)
363 3alj_A 2-methyl-3-hydroxypyrid 95.4 0.013 4.3E-07 48.9 4.1 34 186-219 11-44 (379)
364 3g17_A Similar to 2-dehydropan 95.4 0.014 4.9E-07 47.0 4.2 33 8-40 3-35 (294)
365 3vrd_B FCCB subunit, flavocyto 95.3 0.016 5.4E-07 48.7 4.6 36 185-220 1-38 (401)
366 2ew2_A 2-dehydropantoate 2-red 95.3 0.016 5.6E-07 46.8 4.5 33 8-40 4-36 (316)
367 2a9f_A Putative malic enzyme ( 95.3 0.016 5.5E-07 48.3 4.4 34 7-40 188-222 (398)
368 3k6j_A Protein F01G10.3, confi 95.3 0.021 7.3E-07 48.9 5.3 34 7-40 54-87 (460)
369 3nrn_A Uncharacterized protein 95.3 0.013 4.4E-07 49.6 3.9 33 187-219 1-33 (421)
370 2iid_A L-amino-acid oxidase; f 95.3 0.016 5.4E-07 50.2 4.6 35 185-219 32-66 (498)
371 3dtt_A NADP oxidoreductase; st 95.3 0.021 7.1E-07 44.7 4.8 35 7-41 19-53 (245)
372 1y56_A Hypothetical protein PH 95.3 0.043 1.5E-06 47.6 7.2 45 91-147 267-311 (493)
373 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.017 5.8E-07 44.5 4.0 37 183-219 28-64 (223)
374 2hjr_A Malate dehydrogenase; m 95.2 0.021 7.1E-07 46.8 4.8 33 8-40 15-48 (328)
375 3pef_A 6-phosphogluconate dehy 95.2 0.019 6.4E-07 46.0 4.5 34 8-41 2-35 (287)
376 3vtf_A UDP-glucose 6-dehydroge 95.2 0.016 5.5E-07 49.3 4.2 34 7-40 21-54 (444)
377 1vl6_A Malate oxidoreductase; 95.2 0.019 6.4E-07 47.8 4.4 34 6-39 191-225 (388)
378 3c4a_A Probable tryptophan hyd 95.1 0.016 5.5E-07 48.4 4.0 32 188-219 2-35 (381)
379 2oln_A NIKD protein; flavoprot 95.1 0.017 5.7E-07 48.4 4.1 33 187-219 5-37 (397)
380 1z82_A Glycerol-3-phosphate de 95.1 0.021 7.3E-07 46.8 4.6 34 7-40 14-47 (335)
381 2vns_A Metalloreductase steap3 95.1 0.027 9.3E-07 43.1 5.0 34 7-40 28-61 (215)
382 1ryi_A Glycine oxidase; flavop 95.1 0.012 4.3E-07 48.8 3.2 33 187-219 18-50 (382)
383 3ka7_A Oxidoreductase; structu 95.1 0.015 5E-07 49.2 3.7 32 188-219 2-33 (425)
384 2v6b_A L-LDH, L-lactate dehydr 95.1 0.022 7.4E-07 46.2 4.5 32 9-40 2-35 (304)
385 1bg6_A N-(1-D-carboxylethyl)-L 95.0 0.022 7.7E-07 47.0 4.6 34 7-40 4-37 (359)
386 1zcj_A Peroxisomal bifunctiona 95.0 0.026 8.9E-07 48.6 5.1 34 7-40 37-70 (463)
387 1mv8_A GMD, GDP-mannose 6-dehy 95.0 0.018 6E-07 49.2 4.0 32 9-40 2-33 (436)
388 3dme_A Conserved exported prot 95.0 0.016 5.5E-07 47.7 3.6 33 187-219 5-37 (369)
389 1k0i_A P-hydroxybenzoate hydro 95.0 0.015 5E-07 48.7 3.4 33 187-219 3-35 (394)
390 1c0p_A D-amino acid oxidase; a 95.0 0.021 7.2E-07 47.2 4.2 34 186-219 6-39 (363)
391 2x3n_A Probable FAD-dependent 95.0 0.017 5.7E-07 48.5 3.6 33 187-219 7-39 (399)
392 3eag_A UDP-N-acetylmuramate:L- 95.0 0.027 9.3E-07 46.1 4.8 35 7-41 4-39 (326)
393 2gf3_A MSOX, monomeric sarcosi 94.9 0.017 5.8E-07 48.1 3.6 33 187-219 4-36 (389)
394 3nix_A Flavoprotein/dehydrogen 94.9 0.016 5.6E-07 48.8 3.5 33 187-219 6-38 (421)
395 3g5s_A Methylenetetrahydrofola 94.9 0.018 6.1E-07 48.4 3.6 33 187-219 2-34 (443)
396 1kyq_A Met8P, siroheme biosynt 94.9 0.027 9.1E-07 44.9 4.4 36 184-219 11-46 (274)
397 1x13_A NAD(P) transhydrogenase 94.9 0.025 8.7E-07 47.7 4.6 34 7-40 172-205 (401)
398 2q3e_A UDP-glucose 6-dehydroge 94.9 0.018 6.2E-07 49.6 3.8 34 7-40 5-40 (467)
399 2uzz_A N-methyl-L-tryptophan o 94.9 0.013 4.5E-07 48.5 2.8 32 188-219 4-35 (372)
400 3c96_A Flavin-containing monoo 94.9 0.02 6.8E-07 48.3 4.0 33 187-219 5-38 (410)
401 4dll_A 2-hydroxy-3-oxopropiona 94.9 0.025 8.6E-07 46.1 4.4 34 7-40 31-64 (320)
402 3c24_A Putative oxidoreductase 94.9 0.032 1.1E-06 44.6 5.0 33 8-40 12-45 (286)
403 3vps_A TUNA, NAD-dependent epi 94.9 0.035 1.2E-06 44.8 5.2 41 1-41 1-42 (321)
404 2e1m_A L-glutamate oxidase; L- 94.8 0.026 8.8E-07 47.2 4.4 34 185-218 43-76 (376)
405 4gde_A UDP-galactopyranose mut 94.8 0.019 6.4E-07 49.8 3.8 33 187-219 11-44 (513)
406 3cgv_A Geranylgeranyl reductas 94.8 0.018 6.3E-07 48.0 3.6 33 187-219 5-37 (397)
407 2qyt_A 2-dehydropantoate 2-red 94.8 0.016 5.5E-07 47.0 3.1 32 7-38 8-45 (317)
408 3pdu_A 3-hydroxyisobutyrate de 94.8 0.02 6.8E-07 45.9 3.6 34 8-41 2-35 (287)
409 1dlj_A UDP-glucose dehydrogena 94.8 0.024 8.2E-07 47.9 4.2 31 9-40 2-32 (402)
410 3l9w_A Glutathione-regulated p 94.8 0.032 1.1E-06 47.2 5.0 34 7-40 4-37 (413)
411 2b9w_A Putative aminooxidase; 94.8 0.02 6.7E-07 48.4 3.7 34 186-219 6-40 (424)
412 3ego_A Probable 2-dehydropanto 94.8 0.029 1E-06 45.4 4.5 32 8-40 3-34 (307)
413 1y56_B Sarcosine oxidase; dehy 94.7 0.018 6.2E-07 47.9 3.3 33 187-219 6-38 (382)
414 3v76_A Flavoprotein; structura 94.7 0.019 6.3E-07 48.8 3.4 34 186-219 27-60 (417)
415 3pqe_A L-LDH, L-lactate dehydr 94.7 0.029 9.8E-07 45.9 4.4 35 6-40 4-40 (326)
416 3k7m_X 6-hydroxy-L-nicotine ox 94.7 0.019 6.3E-07 48.7 3.4 32 188-219 3-34 (431)
417 3nks_A Protoporphyrinogen oxid 94.7 0.019 6.6E-07 49.3 3.5 33 187-219 3-37 (477)
418 1jw9_B Molybdopterin biosynthe 94.7 0.026 8.8E-07 44.3 3.9 34 7-40 31-65 (249)
419 3tl2_A Malate dehydrogenase; c 94.7 0.039 1.3E-06 44.9 5.1 33 7-39 8-41 (315)
420 4e21_A 6-phosphogluconate dehy 94.7 0.032 1.1E-06 46.3 4.6 34 7-40 22-55 (358)
421 1l7d_A Nicotinamide nucleotide 94.7 0.034 1.2E-06 46.6 4.9 35 6-40 171-205 (384)
422 2o3j_A UDP-glucose 6-dehydroge 94.7 0.023 7.8E-07 49.2 3.8 33 8-40 10-44 (481)
423 1guz_A Malate dehydrogenase; o 94.7 0.033 1.1E-06 45.2 4.6 32 9-40 2-35 (310)
424 3cky_A 2-hydroxymethyl glutara 94.7 0.028 9.5E-07 45.2 4.2 34 7-40 4-37 (301)
425 3hwr_A 2-dehydropantoate 2-red 94.6 0.033 1.1E-06 45.4 4.6 33 7-40 19-51 (318)
426 2h78_A Hibadh, 3-hydroxyisobut 94.6 0.028 9.6E-07 45.3 4.1 34 7-40 3-36 (302)
427 1ldn_A L-lactate dehydrogenase 94.6 0.034 1.2E-06 45.3 4.6 39 1-40 1-41 (316)
428 3d1l_A Putative NADP oxidoredu 94.6 0.029 9.9E-07 44.3 4.1 34 7-40 10-44 (266)
429 4ezb_A Uncharacterized conserv 94.6 0.032 1.1E-06 45.4 4.4 33 8-40 25-58 (317)
430 1id1_A Putative potassium chan 94.6 0.039 1.3E-06 39.6 4.4 34 186-219 3-36 (153)
431 3g3e_A D-amino-acid oxidase; F 94.6 0.03 1E-06 46.0 4.2 32 188-219 2-39 (351)
432 3ojo_A CAP5O; rossmann fold, c 94.6 0.026 8.8E-07 48.0 3.9 33 8-40 12-44 (431)
433 2uyy_A N-PAC protein; long-cha 94.6 0.043 1.5E-06 44.5 5.1 34 7-40 30-63 (316)
434 1pjq_A CYSG, siroheme synthase 94.6 0.032 1.1E-06 47.9 4.5 34 7-40 12-45 (457)
435 3mog_A Probable 3-hydroxybutyr 94.6 0.036 1.2E-06 47.9 4.8 34 7-40 5-38 (483)
436 3d0o_A L-LDH 1, L-lactate dehy 94.6 0.032 1.1E-06 45.5 4.2 34 7-40 6-41 (317)
437 1ur5_A Malate dehydrogenase; o 94.5 0.04 1.4E-06 44.7 4.7 33 8-40 3-36 (309)
438 1txg_A Glycerol-3-phosphate de 94.5 0.028 9.7E-07 45.9 3.9 30 9-38 2-31 (335)
439 1jay_A Coenzyme F420H2:NADP+ o 94.5 0.043 1.5E-06 41.6 4.7 32 9-40 2-34 (212)
440 2gag_B Heterotetrameric sarcos 94.5 0.025 8.6E-07 47.3 3.6 33 187-219 22-56 (405)
441 2jae_A L-amino acid oxidase; o 94.5 0.034 1.2E-06 47.9 4.5 35 185-219 10-44 (489)
442 3gvi_A Malate dehydrogenase; N 94.5 0.045 1.5E-06 44.7 4.9 35 7-41 7-42 (324)
443 1pjc_A Protein (L-alanine dehy 94.5 0.044 1.5E-06 45.5 5.0 34 7-40 167-200 (361)
444 4huj_A Uncharacterized protein 94.5 0.023 7.8E-07 43.7 3.0 34 7-40 23-57 (220)
445 3i6d_A Protoporphyrinogen oxid 94.4 0.022 7.5E-07 48.7 3.2 33 187-219 6-44 (470)
446 3qj4_A Renalase; FAD/NAD(P)-bi 94.4 0.022 7.6E-07 46.7 3.0 33 187-219 2-37 (342)
447 1nyt_A Shikimate 5-dehydrogena 94.3 0.048 1.6E-06 43.3 4.8 34 7-40 119-152 (271)
448 3fwz_A Inner membrane protein 94.3 0.045 1.5E-06 38.7 4.2 36 185-220 6-41 (140)
449 1a5z_A L-lactate dehydrogenase 94.3 0.034 1.2E-06 45.4 3.9 32 9-40 2-35 (319)
450 3phh_A Shikimate dehydrogenase 94.3 0.051 1.7E-06 43.1 4.8 34 7-40 118-151 (269)
451 2gqf_A Hypothetical protein HI 94.3 0.026 8.9E-07 47.6 3.3 33 187-219 5-37 (401)
452 2eez_A Alanine dehydrogenase; 94.3 0.05 1.7E-06 45.3 5.0 34 7-40 166-199 (369)
453 2qa2_A CABE, polyketide oxygen 94.3 0.033 1.1E-06 48.4 4.0 35 185-219 11-45 (499)
454 2i6t_A Ubiquitin-conjugating e 94.3 0.038 1.3E-06 44.7 4.1 35 7-41 14-50 (303)
455 1dhr_A Dihydropteridine reduct 94.3 0.059 2E-06 41.8 5.1 41 1-41 1-42 (241)
456 2pv7_A T-protein [includes: ch 94.3 0.052 1.8E-06 43.7 4.9 33 8-40 22-55 (298)
457 1rsg_A FMS1 protein; FAD bindi 94.3 0.025 8.4E-07 49.3 3.1 33 187-219 9-42 (516)
458 3q2o_A Phosphoribosylaminoimid 94.3 0.065 2.2E-06 44.9 5.6 36 6-41 13-48 (389)
459 3dje_A Fructosyl amine: oxygen 94.2 0.033 1.1E-06 47.2 3.9 33 187-219 7-40 (438)
460 3gpi_A NAD-dependent epimerase 94.2 0.063 2.2E-06 42.6 5.3 34 7-40 3-36 (286)
461 2zyd_A 6-phosphogluconate dehy 94.2 0.047 1.6E-06 47.2 4.8 34 7-40 15-48 (480)
462 3nyc_A D-arginine dehydrogenas 94.2 0.028 9.5E-07 46.5 3.2 33 186-219 9-41 (381)
463 2qa1_A PGAE, polyketide oxygen 94.2 0.039 1.3E-06 48.0 4.2 34 186-219 11-44 (500)
464 3qsg_A NAD-binding phosphogluc 94.2 0.038 1.3E-06 44.9 3.9 33 7-39 24-57 (312)
465 2bi7_A UDP-galactopyranose mut 94.2 0.039 1.3E-06 46.2 4.1 33 187-219 4-36 (384)
466 1hyh_A L-hicdh, L-2-hydroxyiso 94.1 0.039 1.3E-06 44.8 3.9 33 8-40 2-36 (309)
467 3atr_A Conserved archaeal prot 94.1 0.024 8.1E-07 48.5 2.7 33 187-219 7-39 (453)
468 3i3l_A Alkylhalidase CMLS; fla 94.1 0.044 1.5E-06 48.7 4.5 34 186-219 23-56 (591)
469 2gf2_A Hibadh, 3-hydroxyisobut 94.1 0.047 1.6E-06 43.7 4.4 32 9-40 2-33 (296)
470 2f1k_A Prephenate dehydrogenas 94.1 0.051 1.7E-06 43.2 4.5 32 9-40 2-33 (279)
471 3c4n_A Uncharacterized protein 94.1 0.035 1.2E-06 46.8 3.7 33 187-219 37-71 (405)
472 2vhw_A Alanine dehydrogenase; 94.1 0.058 2E-06 45.1 5.0 35 6-40 167-201 (377)
473 4gwg_A 6-phosphogluconate dehy 94.1 0.059 2E-06 46.5 5.0 34 7-40 4-37 (484)
474 3ihg_A RDME; flavoenzyme, anth 94.1 0.032 1.1E-06 48.8 3.5 33 187-219 6-38 (535)
475 1evy_A Glycerol-3-phosphate de 94.1 0.032 1.1E-06 46.4 3.3 32 9-40 17-48 (366)
476 2aqj_A Tryptophan halogenase, 94.0 0.044 1.5E-06 48.0 4.3 34 186-219 5-41 (538)
477 1lss_A TRK system potassium up 94.0 0.045 1.6E-06 38.2 3.7 34 186-219 4-37 (140)
478 3ps9_A TRNA 5-methylaminomethy 94.0 0.055 1.9E-06 48.8 5.0 34 186-219 272-305 (676)
479 4e4t_A Phosphoribosylaminoimid 94.0 0.071 2.4E-06 45.2 5.4 36 6-41 34-69 (419)
480 2e4g_A Tryptophan halogenase; 94.0 0.054 1.9E-06 47.6 4.8 34 186-219 25-61 (550)
481 2egg_A AROE, shikimate 5-dehyd 94.0 0.063 2.1E-06 43.3 4.8 34 7-40 141-175 (297)
482 1s3e_A Amine oxidase [flavin-c 94.0 0.03 1E-06 48.8 3.1 33 187-219 5-37 (520)
483 2weu_A Tryptophan 5-halogenase 94.0 0.037 1.3E-06 48.0 3.7 33 187-219 3-38 (511)
484 1yj8_A Glycerol-3-phosphate de 94.0 0.039 1.3E-06 46.0 3.6 34 8-41 22-62 (375)
485 2r0c_A REBC; flavin adenine di 94.0 0.037 1.3E-06 48.7 3.6 33 187-219 27-59 (549)
486 3p7m_A Malate dehydrogenase; p 94.0 0.066 2.3E-06 43.7 4.9 35 7-41 5-40 (321)
487 3ius_A Uncharacterized conserv 93.9 0.059 2E-06 42.7 4.6 34 7-40 5-38 (286)
488 2wtb_A MFP2, fatty acid multif 93.9 0.068 2.3E-06 48.7 5.4 34 7-40 312-345 (725)
489 3dhn_A NAD-dependent epimerase 93.9 0.049 1.7E-06 41.6 3.9 34 7-40 4-38 (227)
490 2pgd_A 6-phosphogluconate dehy 93.9 0.061 2.1E-06 46.5 4.9 33 8-40 3-35 (482)
491 1ez4_A Lactate dehydrogenase; 93.9 0.053 1.8E-06 44.2 4.3 36 5-40 3-40 (318)
492 3e1t_A Halogenase; flavoprotei 93.9 0.037 1.3E-06 48.2 3.5 33 187-219 8-40 (512)
493 3ggo_A Prephenate dehydrogenas 93.9 0.06 2E-06 43.8 4.6 33 8-40 34-68 (314)
494 2cvz_A Dehydrogenase, 3-hydrox 93.9 0.052 1.8E-06 43.3 4.2 32 8-40 2-33 (289)
495 1yqg_A Pyrroline-5-carboxylate 93.9 0.049 1.7E-06 42.8 4.0 32 9-40 2-34 (263)
496 2bcg_G Secretory pathway GDP d 93.9 0.035 1.2E-06 47.6 3.3 33 187-219 12-44 (453)
497 1hdo_A Biliverdin IX beta redu 93.9 0.075 2.6E-06 39.7 4.9 33 8-40 4-37 (206)
498 3e8x_A Putative NAD-dependent 93.9 0.065 2.2E-06 41.3 4.6 34 7-40 21-55 (236)
499 2p4q_A 6-phosphogluconate dehy 93.9 0.064 2.2E-06 46.6 4.9 33 8-40 11-43 (497)
500 2g5c_A Prephenate dehydrogenas 93.9 0.061 2.1E-06 42.8 4.5 33 8-40 2-36 (281)
No 1
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=2.6e-31 Score=234.45 Aligned_cols=210 Identities=22% Similarity=0.399 Sum_probs=183.6
Q ss_pred CCeEEEECCCHHHHHHHHHHh-hCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCC----CCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~-~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+++|..|+ +.|.+|+|+|+.+.+||.|..+.|+.+.++.+...+.+...+ ...+...+++..
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 899999999999999999999999999988887777666331 112344567889
Q ss_pred HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 025254 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (255)
Q Consensus 82 ~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~ 161 (255)
++.+|+.+.++++++..+++++++|++++..+..+.|.|++.++ .+ +.||+||+|+|.++.|.+|++||.+.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG-------EV-YRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS-------CE-EEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC-------CE-EEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999865669999999999987556899998765 67 89999999999989999999999998
Q ss_pred cccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccccccC
Q 025254 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQVWD 230 (255)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 230 (255)
| .+..+|...+.......+++|+|||+|.+|+|+|..|++.+.+|++++|++.+++|..+...
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~ 222 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPV 222 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBC
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCC
Confidence 8 89999999888777778999999999999999999999999999999999977888765443
No 2
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.98 E-value=2.5e-31 Score=234.92 Aligned_cols=210 Identities=27% Similarity=0.423 Sum_probs=181.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCC----CCCCCCCCCCHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (255)
.+||+|||||++|+.+|..|++.|.+|+|||+.+.+||.|..+.|+.+.++.+...+.+...+ ...+...+++..+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999999999999988888777765431 1234456788999
Q ss_pred HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccc
Q 025254 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (255)
Q Consensus 83 ~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~ 162 (255)
+.+|+.+.++++++..+++++++|++++..+..+.|.|++.++ .+ +.||+||+|+|..+.|.+|++||.+.|
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG-------DE-VSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999866679999999999887556899998765 67 899999999998889999999999988
Q ss_pred ccCCCCCCcEEecccCC-CCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccccccC
Q 025254 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQVWD 230 (255)
Q Consensus 163 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~~~~ 230 (255)
.+..+|...+. ......+++++|||+|.+|+|+|..|++.+.+|++++|++.+++|..+...
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~ 235 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPL 235 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCC
Confidence 89999999887 456678999999999999999999999999999999999977888765443
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.98 E-value=1.7e-31 Score=235.75 Aligned_cols=210 Identities=23% Similarity=0.369 Sum_probs=179.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCC----CCCCCCCCCHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (255)
..+||+|||||++|+.+|..|.+.|.+|+|||+.+.+||.|..+.|+.+.++.+...+.+...+. ..+...+++..
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35799999999999999999999999999999999999999999999998888877766543221 23445678899
Q ss_pred HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 025254 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (255)
Q Consensus 82 ~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~ 161 (255)
++.+|+.+.++++++..+++++++|++++..+..+.|.|++.++ .+ +.||+||+|+|.++.|.+|++||.+.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-------EV-VTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT-------EE-EEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999866679999999999877556899998764 68 99999999999988999999999998
Q ss_pred cccCCCCCCcEEecccCCCC-------CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecccccc
Q 025254 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQVW 229 (255)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~~~ 229 (255)
| .+..+|...+... ....+++|+|||+|.+|+|+|..|++.+.+|++++|++.+++|..+..
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~ 228 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSP 228 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCB
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCC
Confidence 8 8889999887765 566789999999999999999999999999999999996678876543
No 4
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.97 E-value=1.2e-30 Score=226.82 Aligned_cols=208 Identities=19% Similarity=0.376 Sum_probs=171.2
Q ss_pred CeEEEECCCHHHHHHHHHHhh---CCCC---eEEEeccCCCCcccccC---------------CCCCeEEecccccccCC
Q 025254 8 VEVIMVGAGTSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~---~g~~---v~lie~~~~~g~~~~~~---------------~~~~~~~~~~~~~~~~~ 66 (255)
+||+|||||++|+++|..|++ .|.+ |+|||+.+.+||.|... .|..+..+.+...+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999753 34444555555555555
Q ss_pred CCCCCC----CCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 025254 67 HLPFPS----SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (255)
Q Consensus 67 ~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vV 142 (255)
.++++. +.+.+++..++.+|+.++++++++..+++++++|++++..+..+.|.|++.+..++ +..+ +.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g--~~~~-~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD--TIYS-EEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC--ceEE-EEcCEEE
Confidence 554332 22567888999999999999999875569999999999877445899988764222 3367 8999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCcee
Q 025254 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACL 222 (255)
Q Consensus 143 iAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~ 222 (255)
+|||+++.|..|.+||.+.+ .+.++|+..+.......+++++|||+|.+|+|+|..+++.|.+|++++|++ .+
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~-~~ 232 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT-AP 232 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS-CC
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC-CC
Confidence 99999999999999998888 888999998887666678999999999999999999999999999999987 55
Q ss_pred ecc
Q 025254 223 WRF 225 (255)
Q Consensus 223 ~~~ 225 (255)
++.
T Consensus 233 ~~~ 235 (464)
T 2xve_A 233 MGY 235 (464)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 5
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.97 E-value=9.3e-30 Score=225.22 Aligned_cols=208 Identities=24% Similarity=0.423 Sum_probs=175.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCC----CCCCCCCCCHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (255)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|..+.|+.+.++.+...+.+...+. ..+...+++..
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35799999999999999999999999999999999999999988898887777666555442220 11234577889
Q ss_pred HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 025254 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (255)
Q Consensus 82 ~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~ 161 (255)
++.+|+...++++++..+++++++|++++..++.+.|.|++.++ .+ ++||+||+|+|.++.|.+|++||.+.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-------DR-IRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCccc
Confidence 99999999999988776779999999999877556799988764 57 89999999999999999999999988
Q ss_pred cccCCCCCCcEEecccCC-CCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecccc
Q 025254 162 FCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQ 227 (255)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~ 227 (255)
+ .+.++|+..+. +.....+++++|||+|.+|+|++..+.+.+.+|+++.|++.+++|..+
T Consensus 167 f------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~ 227 (542)
T 1w4x_A 167 F------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARN 227 (542)
T ss_dssp C------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCC
T ss_pred C------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCC
Confidence 8 88899998876 335567899999999999999999999999999999999966677654
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.97 E-value=3.8e-29 Score=216.57 Aligned_cols=205 Identities=21% Similarity=0.307 Sum_probs=162.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCC--------------------------------
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSY-------------------------------- 51 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~-------------------------------- 51 (255)
..+||+|||||++|+++|..|++.|. +|+|||+.+.+||.|.....
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46899999999999999999999999 99999999989998876431
Q ss_pred -CCeEEecccccccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCc
Q 025254 52 -DRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (255)
Q Consensus 52 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~ 130 (255)
..+..+.+...+.+..++++...+.+++..++.+|+.+++++++.. ++++++|++++..+ +.|.|++.+..++
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--i~~~t~V~~v~~~~--~~~~V~~~~~~~G-- 158 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPF--IKLATDVLDIEKKD--GSWVVTYKGTKAG-- 158 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGG--EECSEEEEEEEEET--TEEEEEEEESSTT--
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCe--EEeCCEEEEEEeCC--CeEEEEEeecCCC--
Confidence 1122223333445555566666667888999999999999887544 48999999998876 7788988763222
Q ss_pred e-eeEEEeeCEEEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhc
Q 025254 131 E-IEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHA 209 (255)
Q Consensus 131 ~-~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g 209 (255)
+ ..+ +.||+||+|+|+++.|.+|.++|.+.+. ....+.++|+..+.+...+.+++|+|||+|.+|+|+|..|++.+
T Consensus 159 ~~~~~-~~~d~VVvAtG~~s~p~~p~i~G~~~~~--~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~ 235 (447)
T 2gv8_A 159 SPISK-DIFDAVSICNGHYEVPYIPNIKGLDEYA--KAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVA 235 (447)
T ss_dssp CCEEE-EEESEEEECCCSSSSBCBCCCBTHHHHH--HHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTS
T ss_pred CeeEE-EEeCEEEECCCCCCCCCCCCCCChhhhh--ccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHh
Confidence 1 247 8999999999998899999999976530 00035688988887766667899999999999999999999999
Q ss_pred Ce-EEEEEecC
Q 025254 210 AK-TSLVVRSP 219 (255)
Q Consensus 210 ~~-v~~~~r~~ 219 (255)
.+ |+++.|++
T Consensus 236 ~~~V~l~~r~~ 246 (447)
T 2gv8_A 236 KHPIYQSLLGG 246 (447)
T ss_dssp CSSEEEECTTC
T ss_pred CCcEEEEeCCC
Confidence 99 99999987
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=9.7e-29 Score=207.33 Aligned_cols=199 Identities=26% Similarity=0.495 Sum_probs=173.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
++||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|.. .++.+....+.....++.++.+.....++++.++.++
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999985 4677777777777777777777777778889999999
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
+.+.++++++.+ +++++|++++..+ +.|. |.+.+ .+ +.||+||+|+|.++.|.+|.++|...+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~--------g~-~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG--------RQ-WLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS--------CE-EEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC--------CE-EEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999998876 9999999999877 6787 77655 46 899999999998888888999998888
Q ss_pred CCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.+..++...+.......+++++|||+|.+|+|+|..|.+.+ +|+++.|++.+++|..
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~ 202 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADD 202 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTT
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchh
Confidence 78889988888777778899999999999999999999998 6999999854666654
No 8
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.93 E-value=3.6e-25 Score=182.86 Aligned_cols=182 Identities=18% Similarity=0.267 Sum_probs=126.4
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccc-ccCCCCCeEEecccccccCCCCCCCCCCCCCCC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW-KKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (255)
|+. ..|||+||||||+|+++|..|++.|++|+|||+.. +||.. ..... ..++.+ ....
T Consensus 2 Mte--~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i-----------~~~p~~-------~~~~ 60 (312)
T 4gcm_A 2 MTE--IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEV-----------ENFPGF-------EMIT 60 (312)
T ss_dssp --C--CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCB-----------CCSTTC-------SSBC
T ss_pred CCC--CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeeccccc-----------CCcCCc-------cccc
Confidence 653 36999999999999999999999999999999965 55532 11110 011111 1234
Q ss_pred HHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCc
Q 025254 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGL 159 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~ 159 (255)
..++.........+.+... ..+..+...... ....+...+ .+ ++||+||+||| ++|..|++||.
T Consensus 61 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~--------~~-~~~d~liiAtG--s~~~~~~ipG~ 124 (312)
T 4gcm_A 61 GPDLSTKMFEHAKKFGAVY--QYGDIKSVEDKG---EYKVINFGN--------KE-LTAKAVIIATG--AEYKKIGVPGE 124 (312)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EECCCCEEEECS---SCEEEECSS--------CE-EEEEEEEECCC--EEECCCCCTTT
T ss_pred hHHHHHHHHHHHhhccccc--cceeeeeeeeee---cceeeccCC--------eE-EEeceeEEccc--CccCcCCCCCh
Confidence 5566666666666665443 444444333322 233333322 67 99999999999 78889999998
Q ss_pred cccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
+.+ .+..++.....+.....+++++|||+|++|+|+|..+.+.|.+||+++|++ ++++..
T Consensus 125 ~~~------~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~ 184 (312)
T 4gcm_A 125 QEL------GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQR 184 (312)
T ss_dssp TTT------BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCH
T ss_pred hhh------CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcch
Confidence 876 555555444444344568999999999999999999999999999999998 676643
No 9
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.92 E-value=9.2e-25 Score=181.50 Aligned_cols=188 Identities=18% Similarity=0.328 Sum_probs=146.8
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCC--C
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMF--V 78 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 78 (255)
|.+....+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.|... ++.... . ..+.+ .
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~------~---------~~~~~~~~ 64 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYI------Y---------DVAGFPKI 64 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEE------C---------CSTTCSSE
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceE------e---------ccCCCCCC
Confidence 4333345899999999999999999999999999999999999988431 222111 0 11122 3
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIR 157 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s-~~~~~~~~ 157 (255)
+..++..++.+.+.++++.+ +++++|++++..+ .+.|.|.+.+ .. +.+|+||+|||..+ .|..|.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~~d~vVlAtG~~~~~p~~~~~~ 132 (332)
T 3lzw_A 65 RAQELINNLKEQMAKFDQTI--CLEQAVESVEKQA-DGVFKLVTNE--------ET-HYSKTVIITAGNGAFKPRKLELE 132 (332)
T ss_dssp EHHHHHHHHHHHHTTSCCEE--ECSCCEEEEEECT-TSCEEEEESS--------EE-EEEEEEEECCTTSCCEECCCCCT
T ss_pred CHHHHHHHHHHHHHHhCCcE--EccCEEEEEEECC-CCcEEEEECC--------CE-EEeCEEEECCCCCcCCCCCCCCC
Confidence 46788999999998887655 8899999999876 2478888876 56 89999999999633 78888899
Q ss_pred CccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 158 GLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
|.+.+ .+..++. .+.......+++++|||+|.+|+|+|..+.+.+.+|+++.|.+ .+.+
T Consensus 133 g~~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~-~~~~ 191 (332)
T 3lzw_A 133 NAEQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD-KFRA 191 (332)
T ss_dssp TGGGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS-SCSS
T ss_pred Chhhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC-cCCc
Confidence 98876 6555666 4444445568999999999999999999999999999999987 4433
No 10
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.92 E-value=5.6e-24 Score=186.38 Aligned_cols=201 Identities=23% Similarity=0.343 Sum_probs=150.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC--------------CCeEEEeccCCCCcccccCC-CCCeEEecc--cccccCC--C
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS--------------IPYVILERENCYASIWKKYS-YDRLRLHLA--KQFCQLP--H 67 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g--------------~~v~lie~~~~~g~~~~~~~-~~~~~~~~~--~~~~~~~--~ 67 (255)
.+||+|||+||+||++|..|.+.+ ...+.+|+.+.++ |...+ ++...++.+ +.+..+. .
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 479999999999999999997642 3567888887765 76554 455444332 1111111 1
Q ss_pred CC---------------CCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCC------CcEEEEEcccC
Q 025254 68 LP---------------FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEAT------NMWNVKASNLL 126 (255)
Q Consensus 68 ~~---------------~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~------~~~~v~~~~~~ 126 (255)
.+ +..+...|+++.++.+|+++++++++.. ++++++|++++..+.. +.|+|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~--vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDV--VAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGG--EEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCc--eEcceEEEeeccccccccccccceEEEEEecCC
Confidence 11 1223345789999999999999987644 4999999999986632 25999998876
Q ss_pred CCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCC------CCCCCCCeEEEEcCCcCHHH
Q 025254 127 SPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGME 200 (255)
Q Consensus 127 ~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~g~~~~e 200 (255)
++ +..+ +.++.||+|+| ..|.+|+ ...+ .+.++|+..+.. .....+|+|+|||+|.||+|
T Consensus 195 ~g--~~~~-~~ar~vVlatG--~~P~iP~---~~~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 195 TG--EISA-RRTRKVVIAIG--GTAKMPS---GLPQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp TC--CEEE-EEEEEEEECCC--CEECCCT---TSCC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred Cc--eEEE-EEeCEEEECcC--CCCCCCC---CCCC------CcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 55 5578 89999999999 5566555 4456 788999998864 34578999999999999999
Q ss_pred HHHHHhhh--cCeEEEEEecCceeeccc
Q 025254 201 IALDLANH--AAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 201 ~a~~l~~~--g~~v~~~~r~~~~~~~~~ 226 (255)
++..|++. +.+|+++.|++ .+.|..
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~-~~~p~~ 287 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDS-AMRPSD 287 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSS-SCCBCC
T ss_pred HHHHHHhcCCCceEEEEeCCC-cccccc
Confidence 99999876 67999999998 666644
No 11
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.92 E-value=2.4e-24 Score=177.85 Aligned_cols=180 Identities=15% Similarity=0.235 Sum_probs=129.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+||||||+|++||..|+++|++|+|||+....+.......+... .+..++ .++...+..++.+.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~------~i~~~~------g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTT------IIENFP------GFPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSS------EECCST------TCTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChH------Hhhhcc------CCcccCCHHHHHHH
Confidence 589999999999999999999999999999997632212111111110 001111 12233456788888
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
+.+.+.+.+.. .....+....... ..+.+.+.+. .+ +.+|+||+||| +.|..|++||.+.+
T Consensus 72 ~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~~~~~-------~~-~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTT---IITETIDHVDFST--QPFKLFTEEG-------KE-VLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCE---EECCCEEEEECSS--SSEEEEETTC-------CE-EEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcE---EEEeEEEEeecCC--CceEEEECCC-------eE-EEEeEEEEccc--ccccccCCCccccc----
Confidence 88888888765 3444566666554 5555665543 77 99999999999 77888999998765
Q ss_pred CCCCcEEecccCCCC--CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 167 TGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~--~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.....+...+... ....+++++|||+|.+|+|+|..+.+.|.+|++++|.+
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRD 185 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccc
Confidence 4444444443322 23467899999999999999999999999999999987
No 12
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.91 E-value=6.2e-24 Score=175.73 Aligned_cols=177 Identities=16% Similarity=0.229 Sum_probs=138.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++.|++|+|||+. +||.|..... ...++.. ...+..++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI----------VDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE----------ECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc----------ccccCCC-------CCCCHHHHHHH
Confidence 479999999999999999999999999999998 7777764110 0011111 11456788999
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
+.+.+.++++.+ +. ++|++++..+ +.+.+.+.++ .. +.+|+||+|+| +.|..|.++|...+
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK-------GE-FKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS-------CE-EEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC-------CE-EEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999988876 66 8999998876 6788887664 57 89999999999 55888888888766
Q ss_pred CCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
.+..++...........+++++|||+|.+|+|+|..+.+.|.+|+++.+++ ++++
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~ 191 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKA 191 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCS
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCc
Confidence 555555444443344567999999999999999999999999999999998 5555
No 13
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.91 E-value=9.2e-24 Score=175.94 Aligned_cols=185 Identities=21% Similarity=0.352 Sum_probs=138.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++||+|||||++|+++|..|++.|++|+|||+.+.++|.|... ++... ++..+.+ ......++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~-------~~~~~~~~~~ 69 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGF-------PKVYAKDLVK 69 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTC-------SSEEHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCC-------CCCCHHHHHH
Confidence 35899999999999999999999999999999999898877532 21111 0111111 1134567888
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCCCcccccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRGLCSFCS 164 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s-~~~~~~~~g~~~~~~ 164 (255)
++.+.+.++++.+ +++++|++++..+ +.|.|.+.++ .. +.+|+||+|+|..+ .|..|+++|.+.+
T Consensus 70 ~l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~lv~AtG~~~~~p~~~~i~g~~~~-- 135 (335)
T 2zbw_A 70 GLVEQVAPFNPVY--SLGERAETLEREG--DLFKVTTSQG-------NA-YTAKAVIIAAGVGAFEPRRIGAPGEREF-- 135 (335)
T ss_dssp HHHHHHGGGCCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCTTSEEEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EeCCEEEEEEECC--CEEEEEECCC-------CE-EEeCEEEECCCCCCCCCCCCCCCChhhc--
Confidence 8888888887655 8899999999876 5777877653 57 89999999999643 5777778887655
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
.+..++.. +.......+++++|||+|.+|+|+|..|.+.|.+|+++.|++ .+++
T Consensus 136 ----~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~ 189 (335)
T 2zbw_A 136 ----EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRA 189 (335)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCS
T ss_pred ----cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCc
Confidence 43323221 222233467899999999999999999999999999999988 5544
No 14
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.91 E-value=6.6e-24 Score=176.74 Aligned_cols=184 Identities=16% Similarity=0.221 Sum_probs=140.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC----CCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN----CYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.++||+|||||++|+++|..|++.|++|+|||+.+ .+||.|..... +..++ .++.+....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~----------~~~~~------~~~~~~~~~ 84 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE----------IENFP------GFPDGLTGS 84 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE----------ECCST------TCTTCEEHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh----------hcccC------CCcccCCHH
Confidence 35899999999999999999999999999999954 67777654310 00111 123345678
Q ss_pred HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 025254 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (255)
Q Consensus 82 ~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~ 161 (255)
++.+++.+.+.+.++.+ +.++ |++++..+ +.+.+.+....++ .. +.+|+||+|+| +.|..|.++|.+.
T Consensus 85 ~~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~~----~~-~~~d~vvlAtG--~~~~~~~~~g~~~ 152 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNEDA----EP-VTTDAIILATG--ASAKRMHLPGEET 152 (338)
T ss_dssp HHHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSSS----CC-EEEEEEEECCC--EEECCCCCTTHHH
T ss_pred HHHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCCC----cE-EEeCEEEECcC--CCcCCCCCCCchh
Confidence 99999999999998775 7777 99998766 7788877532222 67 89999999999 5678888888776
Q ss_pred cccCCCCCCcEEecccCCCCC--CCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 162 FCSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
+ .+..++........ ...+++++|||+|.+|+|+|..|.+.|.+|+++.|++ .+++
T Consensus 153 ~------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~-~~~~ 210 (338)
T 3itj_A 153 Y------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD-HLRA 210 (338)
T ss_dssp H------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCS
T ss_pred c------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccCC
Confidence 5 44445544332222 4568899999999999999999999999999999988 4443
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.91 E-value=2e-23 Score=173.28 Aligned_cols=177 Identities=20% Similarity=0.329 Sum_probs=132.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+. .+||.|..... +..++. ++...+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPG------FPEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTT------CSSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCC------CCCCCCHHHHHHH
Confidence 579999999999999999999999999999998 57776653210 001111 1123456788899
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
+.+.+++.++.+ +. .+|++++.....+. +.|...++ .. +.+|+||+||| +.|.+|+++|.+.+
T Consensus 71 l~~~~~~~gv~~--~~-~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~i~g~~~~--- 134 (325)
T 2q7v_A 71 MHQQAEKFGAKV--EM-DEVQGVQHDATSHPYPFTVRGYN-------GE-YRAKAVILATG--ADPRKLGIPGEDNF--- 134 (325)
T ss_dssp HHHHHHHTTCEE--EE-CCEEEEEECTTSSSCCEEEEESS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCEE--Ee-eeEEEEEeccCCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 999999888765 55 68999987610132 67766553 67 89999999999 56778888887665
Q ss_pred CCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...........+++++|||+|.+|+|+|..|.+.|.+|+++.|++
T Consensus 135 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 185 (325)
T 2q7v_A 135 ---WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD 185 (325)
T ss_dssp ---BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred ---cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence 444444433322233457899999999999999999999999999999987
No 16
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.91 E-value=7.7e-23 Score=172.50 Aligned_cols=187 Identities=20% Similarity=0.313 Sum_probs=131.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCCCCcccccCCCCCeEEecc---cccccCCCCCC--CCC------C
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLA---KQFCQLPHLPF--PSS------Y 74 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~------~ 74 (255)
.+||+|||||++|+++|..|++.|. +|+|||+.+ +|+.|...... .....+ ...+.+..... ... .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999998 88877532111 000000 00111100000 000 1
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 75 PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 75 ~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
..+++..++.+++.+++++.++.+ +.+++|++++..+ +.|.|.+.+ .+ +.||+||+|+|+++.|.+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~~d~vVlAtG~~~~p~i- 147 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELNI--FENTVVTNISADD--AYYTIATTT--------ET-YHADYIFVATGDYNFPKK- 147 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS--------CC-EEEEEEEECCCSTTSBCC-
T ss_pred ccCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEECC--CeEEEEeCC--------CE-EEeCEEEECCCCCCccCC-
Confidence 234667788899999988888765 8899999999865 578887754 35 889999999997655443
Q ss_pred CCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 155 DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 155 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
|+ . ..+|...+.......+++++|||+|.+|+|+|..|.+.|.+|++++|++ .++
T Consensus 148 --p~-~----------~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-~~~ 202 (369)
T 3d1c_A 148 --PF-K----------YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-GLN 202 (369)
T ss_dssp --CS-S----------SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------
T ss_pred --CC-C----------ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-CCC
Confidence 33 1 2356666655444567899999999999999999999999999999998 555
No 17
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.90 E-value=2.5e-23 Score=171.62 Aligned_cols=174 Identities=21% Similarity=0.343 Sum_probs=132.9
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+||+|||||++|+++|..|++.|. +|+|+|+. ..||.|..... ...++ .++...+..++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYP------GVKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCST------TCCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCC------CCcccCCHHHHHHH
Confidence 699999999999999999999999 99999996 46766543210 00011 11224567788999
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
+.+.+.+.++.+ +. ++|++++..+ +.|.|.+.++ .. +++|+||+|+| +.|..|+++|.+.+
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG-------KT-FEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC-------CE-EECCEEEECCC--CCCCCCCCCChhhc----
Confidence 999888888764 65 7899998876 6677776553 57 89999999999 66778888887665
Q ss_pred CCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...........+++++|||+|.+|+|+|..+.+.|.+|+++.|++
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 176 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD 176 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC
Confidence 444444433332233457999999999999999999999999999999987
No 18
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.90 E-value=3.8e-23 Score=174.01 Aligned_cols=185 Identities=19% Similarity=0.287 Sum_probs=137.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... ++... .+..+.. ......++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~-------~~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGF-------PEVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTC-------SSEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCC-------CCCCHHHHHHH
Confidence 5799999999999999999999999999999999888877522 11110 0111110 01345688888
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC-CCCCCCCCC-cccccc
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRG-LCSFCS 164 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s-~~~~~~~~g-~~~~~~ 164 (255)
+.+.+.++++.+ +++++|++++..+ .+.|.|.+.++ .. +.+|+||+|+|..+ .|..++++| .+.+
T Consensus 80 l~~~~~~~~~~~--~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPDV--VLNETVTKYTKLD-DGTFETRTNTG-------NV-YRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCEE--ECSCCEEEEEECT-TSCEEEEETTS-------CE-EEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCEE--EcCCEEEEEEECC-CceEEEEECCC-------cE-EEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 888888877655 8899999999865 23788887653 57 89999999999654 577777777 5555
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
.+..++.. +.......+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+++
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~ 200 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQG 200 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSS
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCC
Confidence 44323322 222233467899999999999999999999999999999987 4444
No 19
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.90 E-value=1.7e-23 Score=181.86 Aligned_cols=201 Identities=24% Similarity=0.388 Sum_probs=139.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC-----CCeEEEeccCCCCcccccCCC-CCeEEecc--cccccC--CCCCC------
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLA--KQFCQL--PHLPF------ 70 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g-----~~v~lie~~~~~g~~~~~~~~-~~~~~~~~--~~~~~~--~~~~~------ 70 (255)
.+||+|||||++|+++|..|++.| .+|+|||+.+.++ |...++ +....... ..+..+ +...+
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999876 554433 11111100 000000 00000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCC-CCcE--EEEEcccCCCCceeeEEEee
Q 025254 71 ---------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGREIEEYYSG 138 (255)
Q Consensus 71 ---------~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~-~~~~--~v~~~~~~~~~~~~~~~i~~ 138 (255)
......++.+.++.+|+.+++++++..+ +++++|++++..+. .+.| .|.+.++.. ++.+ +.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i--~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g---~~~~-~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQS--RYGEEVLRIEPMLSAGQVEALRVISRNADG---EELV-RTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTE--EESEEEEEEEEEEETTEEEEEEEEEEETTS---CEEE-EEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeE--EeCCEEEEEEEecCCCceEEEEEEEecCCC---ceEE-EEe
Confidence 0011235678899999999999888665 99999999988621 1444 566555421 2247 999
Q ss_pred CEEEEeecCCCCCCCCCCCCccccccCCCCCC--cEEecccCCCC-CCC-----CCCeEEEEcCCcCHHHHHHHHhhh--
Q 025254 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTG--EVIHSTQYKNG-KPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (255)
Q Consensus 139 d~vViAtG~~s~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~ViG~g~~~~e~a~~l~~~-- 208 (255)
|+||+||| +.|.+|+. .+.+ .+ .+++...+... ... .+++++|||+|.+|+|+|..|.+.
T Consensus 182 d~lVlAtG--~~p~~p~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQV--FRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCGG--GGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcch--hhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 56666652 3344 44 57787766442 222 578999999999999999999999
Q ss_pred cCeEEEEEecCceeeccc
Q 025254 209 AAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 209 g~~v~~~~r~~~~~~~~~ 226 (255)
+.+|+++.|++ .++|..
T Consensus 252 ~~~Vt~v~r~~-~~~p~~ 268 (463)
T 3s5w_A 252 SVQADMILRAS-ALKPAD 268 (463)
T ss_dssp TEEEEEECSSS-SCCBCC
T ss_pred CCeEEEEEeCC-CCcCcc
Confidence 89999999998 677654
No 20
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.90 E-value=8.5e-23 Score=167.04 Aligned_cols=170 Identities=16% Similarity=0.178 Sum_probs=131.2
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (255)
+||+|||||++|+++|..|++.|.+|+|+|+....+..+... + .++ .....+..++.+++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-~------------~~~-------~~~~~~~~~~~~~~ 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-H------------GFL-------GQDGKAPGEIIAEA 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-C------------SST-------TCTTCCHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-c------------CCc-------CCCCCCHHHHHHHH
Confidence 799999999999999999999999999999976443221100 0 000 01235567888899
Q ss_pred HHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 88 DHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 88 ~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
.+.+.++ ++. +.+.+|++++..+ +.|.|.+.++ .+ +.||+||+|+| +.|..|.++|...+
T Consensus 63 ~~~~~~~~~v~---~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~vviAtG--~~~~~~~~~g~~~~---- 123 (297)
T 3fbs_A 63 RRQIERYPTIH---WVEGRVTDAKGSF--GEFIVEIDGG-------RR-ETAGRLILAMG--VTDELPEIAGLRER---- 123 (297)
T ss_dssp HHHHTTCTTEE---EEESCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--CEEECCCCBTTGGG----
T ss_pred HHHHHhcCCeE---EEEeEEEEEEEcC--CeEEEEECCC-------CE-EEcCEEEECCC--CCCCCCCCCCchhh----
Confidence 8888877 333 4456999999876 6788888764 67 89999999999 66788888888766
Q ss_pred CCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+...+...+.......+++++|||+|.+|+|+|..+.+.| +|+++.+.+
T Consensus 124 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 124 --WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp --BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred --cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 55555555444444456899999999999999999999999 999999887
No 21
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.89 E-value=7.4e-23 Score=170.62 Aligned_cols=178 Identities=19% Similarity=0.274 Sum_probs=131.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..+||+|||||++|+++|..|++.|++|+|+|+. .+||.|..... ...++ .++......++.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~ 75 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYP------GFRNGITGPELMD 75 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCST------TCTTCBCHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcC------CCCCCCCHHHHHH
Confidence 3579999999999999999999999999999986 46666543210 00011 1112245678888
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEE-EEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNV-KASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v-~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
++.+.+.+.++.+ +.+. |++++. . +.|+| .+.++ .. +.+|+||+|+| +.|..|+++|...+
T Consensus 76 ~l~~~~~~~~v~~--~~~~-v~~i~~-~--~~~~v~~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~g~~~~-- 137 (335)
T 2a87_A 76 EMREQALRFGADL--RMED-VESVSL-H--GPLKSVVTADG-------QT-HRARAVILAMG--AAARYLQVPGEQEL-- 137 (335)
T ss_dssp HHHHHHHHTTCEE--ECCC-EEEEEC-S--SSSEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTHHHHT--
T ss_pred HHHHHHHHcCCEE--EEee-EEEEEe-C--CcEEEEEeCCC-------CE-EEeCEEEECCC--CCccCCCCCchHhc--
Confidence 9988888888765 7765 888877 3 56777 66543 57 89999999999 56778888887655
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
.+..++...........+++++|||+|.+|+|+|..+.+.|.+|++++|++ .+.
T Consensus 138 ----~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~-~~~ 191 (335)
T 2a87_A 138 ----LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD-EFR 191 (335)
T ss_dssp ----BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS-SCS
T ss_pred ----cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC-cCC
Confidence 444444332222223467999999999999999999999999999999987 443
No 22
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.89 E-value=6.6e-23 Score=170.63 Aligned_cols=175 Identities=15% Similarity=0.229 Sum_probs=128.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEec----cCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (255)
.+||+|||||++|+++|..|++.|++|+|+|+ ....++.|.... ....++ .++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFP------GFPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCC------CCccCCCHHH
Confidence 57999999999999999999999999999999 444555543211 000111 1112234668
Q ss_pred HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc-
Q 025254 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS- 161 (255)
Q Consensus 83 ~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~- 161 (255)
+.+++.+.+.+.++.+ +.+. |++++..+ +.++|.+ ++ .+ +++|+||+|+| +.|..|+++|...
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~-------~~-~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS-------KA-ILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS-------EE-EEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC-------cE-EEcCEEEECCC--CCcCCCCCCCcccc
Confidence 8888888888888765 6765 88888765 6777877 32 67 99999999999 5577777877654
Q ss_pred ---cccCCCCCCcEEecccCCCCCC--CCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 162 ---~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
+ .+..++......... ..+++++|||+|.+|+|+|..|.+.|.+|+++.|++
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 192 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD 192 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC
Confidence 3 333344333222222 467899999999999999999999999999999988
No 23
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.89 E-value=2e-22 Score=166.10 Aligned_cols=177 Identities=21% Similarity=0.325 Sum_probs=135.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEE-EeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~l-ie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
.++||+|||||++|+++|..|++.|++|+| +|+ ..+||.|..... +..++ ..+...+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 358999999999999999999999999999 999 567887653211 00011 112345678999
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
.++.+.+.++++.+ +.+ +|+++ ..+..+.|.+.+... .. +.+|+||+|+| +.|..|.++|...+
T Consensus 66 ~~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~-------~~-~~~d~lvlAtG--~~~~~~~~~g~~~~-- 129 (315)
T 3r9u_A 66 APWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG-------KT-ELAKAVIVCTG--SAPKKAGFKGEDEF-- 129 (315)
T ss_dssp HHHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCBTTTTT--
T ss_pred HHHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC-------CE-EEeCEEEEeeC--CCCCCCCCCChhhc--
Confidence 99999999988765 666 88888 543225677544432 26 89999999999 67888888888766
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...+.......+++++|||+|.+|+|+|..+.+.+.+|+++.+++
T Consensus 130 ----~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~ 180 (315)
T 3r9u_A 130 ----FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD 180 (315)
T ss_dssp ----BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS
T ss_pred ----CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC
Confidence 555566555444444568999999999999999999999999999999987
No 24
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.89 E-value=2e-22 Score=166.89 Aligned_cols=174 Identities=16% Similarity=0.329 Sum_probs=128.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..+||+|||||++|+++|..|++.|++|+|+|+. ..||.|..... +..++. + ......++.+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~-~~~~~~~~~~ 76 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLG------F-KSIVGSELAK 76 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTT------B-SSBCHHHHHH
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCC------C-cccCHHHHHH
Confidence 3579999999999999999999999999999995 46665542210 000111 1 1345667888
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
++.+.+.+.++.+ +. .+|++++..+ +.+.|.+.+ .. +.+|+||+|+| +.|.+|+++|.+.+
T Consensus 77 ~~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~--------~~-~~~~~li~AtG--~~~~~~~i~g~~~~--- 137 (319)
T 3cty_A 77 LFADHAANYAKIR--EG-VEVRSIKKTQ--GGFDIETND--------DT-YHAKYVIITTG--TTHKHLGVKGESEY--- 137 (319)
T ss_dssp HHHHHHHTTSEEE--ET-CCEEEEEEET--TEEEEEESS--------SE-EEEEEEEECCC--EEECCCCCBTTTTT---
T ss_pred HHHHHHHHcCCEE--EE-eeEEEEEEeC--CEEEEEECC--------CE-EEeCEEEECCC--CCcccCCCCChHHh---
Confidence 8888888887654 55 6899998866 567776632 57 89999999999 56778888877654
Q ss_pred CCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...........+++++|||+|.+|+|+|..+.+.|.+|++++|++
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~ 188 (319)
T 3cty_A 138 ---FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP 188 (319)
T ss_dssp ---BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS
T ss_pred ---CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC
Confidence 333333322222223457899999999999999999999999999999987
No 25
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.88 E-value=1.8e-22 Score=166.36 Aligned_cols=175 Identities=19% Similarity=0.249 Sum_probs=130.8
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (255)
+||+|||||++|+++|..|++.|.+|+|+|+ ..||.|....- +..+. ...+.+..++.+++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~----------~~~~~-------~~~~~~~~~~~~~~ 62 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVD----------IENYI-------SVPKTEGQKLAGAL 62 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCE----------ECCBT-------TBSSEEHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceeccccc----------ccccc-------CcCCCCHHHHHHHH
Confidence 7999999999999999999999999999986 36776653210 00000 01234566888899
Q ss_pred HHHHHhcCCCCeeEeccEEEEEEEcCC-CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 88 DHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 88 ~~~~~~~~l~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
.+.+++.++.+ +.+++|++++.... .+.+.|.+.++ .. +++|+||+|+| +.|..|++||.+.+
T Consensus 63 ~~~~~~~~v~~--~~~~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~---- 126 (310)
T 1fl2_A 63 KVHVDEYDVDV--IDSQSASKLIPAAVEGGLHQIETASG-------AV-LKARSIIVATG--AKWRNMNVPGEDQY---- 126 (310)
T ss_dssp HHHHHTSCEEE--ECSCCEEEEECCSSTTCCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT----
T ss_pred HHHHHHcCCeE--EccCEEEEEEecccCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCChhhc----
Confidence 88888887665 88889999976531 23688887654 57 89999999999 55677788887665
Q ss_pred CCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...........+++++|||+|.+|+|+|..|.+.+.+|+++.|++
T Consensus 127 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 177 (310)
T 1fl2_A 127 --RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP 177 (310)
T ss_dssp --BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSS
T ss_pred --ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCc
Confidence 443344333222233457899999999999999999999999999999987
No 26
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.88 E-value=1.8e-22 Score=167.02 Aligned_cols=174 Identities=18% Similarity=0.306 Sum_probs=128.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+. .++|.|..... ...++ .++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~------~~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWP------GDPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCST------TCCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCC------CCCCCCCHHHHHHH
Confidence 579999999999999999999999999999975 46665532210 00011 11122456788888
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
+.+.+.+.++.+ +.+. |+.++..+ +.|.+ ..++ .. +.+|+||+|+| +.|..|+++|.+.+
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN-------GE-YTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS-------CE-EEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC-------CE-EEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 888888888764 6664 88888765 67777 4332 67 89999999999 56777888776655
Q ss_pred CCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..++...........+++++|||+|.+|+|+|..|.+.|.+|++++|++
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD 178 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 333344332222223467899999999999999999999999999999987
No 27
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.88 E-value=5.3e-22 Score=163.33 Aligned_cols=175 Identities=13% Similarity=0.212 Sum_probs=124.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+.+||+||||||+|++||.+|++.|++|+|||++. .+|.+..+ + +.+.. .......++.+
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~--------------~~~~~----~~~~~~~~~~~ 64 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-S--------------HGFIT----RDGIKPEEFKE 64 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-B--------------CCSTT----CTTBCHHHHHH
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-c--------------CCccC----CCCCCHHHHHH
Confidence 46999999999999999999999999999999976 44432211 1 11110 11234556776
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
...+.+.+++... +....++.+...+ .+.+++.+.++ .+ ++||+||+||| ++|..|++||.+.+
T Consensus 65 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g-------~~-~~a~~liiATG--s~p~~p~i~G~~~~--- 128 (304)
T 4fk1_A 65 IGLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH-------TK-YLAERVLLATG--MQEEFPSIPNVREY--- 128 (304)
T ss_dssp HHHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC-------CE-EEEEEEEECCC--CEEECCSCTTHHHH---
T ss_pred HHHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC-------CE-EEeCEEEEccC--CccccccccCcccc---
Confidence 6666666665433 5555666766654 36677877765 67 99999999999 78889999998776
Q ss_pred CCCCCcEEecccCCCCCCCCCCeEEEEcCCcC-HHHHHHHHhhhcCeEEEEEecC
Q 025254 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~-~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+..+............+++++|||+|.. +.++|..+.+.+.+|+++.+.+
T Consensus 129 ---~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 129 ---YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp ---BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred ---ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 55444444333334455678888888854 6789999888899999998876
No 28
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.88 E-value=1.3e-21 Score=172.29 Aligned_cols=180 Identities=18% Similarity=0.250 Sum_probs=135.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..+||+|||||++|+++|..|++.|.+|+++|+ ..||.|..... + ..+.. ..+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~--~--------~~~~~-------~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVD--I--------ENYIS-------VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSC--B--------CCBTT-------BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccc--c--------cccCC-------CCCCCHHHHHH
Confidence 468999999999999999999999999999986 46777653210 0 00000 11245678888
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCC-CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
++.+.+.++++.+ +.+++|+++..... .+.+.|.+.++ .. +++|+||+||| +.+..|++||...+
T Consensus 272 ~l~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~V~~~~g-------~~-~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVDV--IDSQSASKLVPAATEGGLHQIETASG-------AV-LKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEEE--ECSCCEEEEECCSSTTSCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCEE--EcCCEEEEEEeccCCCceEEEEECCC-------CE-EEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 9999888888765 88889999986431 24688887654 57 89999999999 55677788887766
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
.+..++...........+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~-~l~ 391 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP-EMK 391 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS-SCC
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc-ccC
Confidence 444444443333334468999999999999999999999999999999987 443
No 29
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.86 E-value=3.1e-23 Score=175.93 Aligned_cols=172 Identities=15% Similarity=0.178 Sum_probs=120.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
...+|+|||||++|+++|..|...+.+|+|||+.+..+- ++ . ..+..+ . ...+..++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y-~~------~--~l~~~l---~---------g~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY-YR------P--RLNEII---A---------KNKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB-CG------G--GHHHHH---H---------SCCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc-cc------C--hhhHHH---c---------CCCCHHHccC
Confidence 457999999999999999999777899999999986541 00 0 000000 0 0011112222
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
+..+++++.++.+ +++++|++++..+ . .|++.++ .+ +.||+||+||| +.|..|++||.+
T Consensus 67 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~--~v~~~~g-------~~-~~yd~lvlAtG--~~p~~p~i~G~~----- 125 (385)
T 3klj_A 67 KKNDWYEKNNIKV--ITSEFATSIDPNN--K--LVTLKSG-------EK-IKYEKLIIASG--SIANKIKVPHAD----- 125 (385)
T ss_dssp SCHHHHHHTTCEE--ECSCCEEEEETTT--T--EEEETTS-------CE-EECSEEEECCC--EEECCCCCTTCS-----
T ss_pred CCHHHHHHCCCEE--EeCCEEEEEECCC--C--EEEECCC-------CE-EECCEEEEecC--CCcCCCCCCCCC-----
Confidence 2334445667665 8999999998754 3 4666654 67 99999999999 788888888754
Q ss_pred CCCCCcEEecccCCCCCC-----CCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~-----~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
.+++.....+... ..+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++.
T Consensus 126 -----~v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~ 184 (385)
T 3klj_A 126 -----EIFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLER 184 (385)
T ss_dssp -----CEECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTT
T ss_pred -----CeEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchh
Confidence 2333332221111 126899999999999999999999999999999998 77765
No 30
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.84 E-value=2e-20 Score=162.13 Aligned_cols=176 Identities=15% Similarity=0.179 Sum_probs=120.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+||+|||||++|+++|..|++. +.+|+|||+.+.++.... .... +... ...+..++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--~~~~-----------~~~~-------~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--GLSA-----------YFNH-------TINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--cchh-----------hhcC-------CCCCHHHhhc
Confidence 6999999999999999999998 889999999987652110 0000 0000 0000011111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
...+.+.+.++.+ +++++|++++... ..+.+.... +... +.+|+||+||| +.|..|+++|.+.
T Consensus 63 ~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~v~~~~------~~~~-~~~d~lviAtG--~~p~~p~i~g~~~---- 125 (452)
T 3oc4_A 63 ITEEELRRQKIQL--LLNREVVAMDVEN--QLIAWTRKE------EQQW-YSYDKLILATG--ASQFSTQIRGSQT---- 125 (452)
T ss_dssp CCHHHHHHTTEEE--ECSCEEEEEETTT--TEEEEEETT------EEEE-EECSEEEECCC--CCBCCCCCBTTTC----
T ss_pred CCHHHHHHCCCEE--EECCEEEEEECCC--CEEEEEecC------ceEE-EEcCEEEECCC--cccCCCCCCCCCC----
Confidence 1223345566554 8899999998765 666665221 2267 99999999999 7888888888653
Q ss_pred CCCCCcEEecccCCCCC-----CCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 166 ATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~~-----~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
..+++...+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++|.
T Consensus 126 ----~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 185 (452)
T 3oc4_A 126 ----EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPK 185 (452)
T ss_dssp ----TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred ----CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccc
Confidence 2455555443321 1257899999999999999999999999999999998 67764
No 31
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.84 E-value=1.6e-20 Score=163.35 Aligned_cols=188 Identities=13% Similarity=0.103 Sum_probs=122.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEecc----cccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+....... ..+..+... ....+..
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 5899999999999999999999999999999888899976531 1110000000 000000000 1112222
Q ss_pred HHH------------HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 82 QFI------------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 82 ~~~------------~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+. .++...+++.++.+ ..+ +++.++. +.+.|...++ +..+ +.+|+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~v~~id~----~~~~V~~~~g-----~~~~-~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLTF--YKG-YVKIKDP----THVIVKTDEG-----KEIE-AETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEEE--ESE-EEEEEET----TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCEE--EEe-EEEEecC----CeEEEEcCCC-----cEEE-EecCEEEECCC--C
Confidence 222 22222333334432 433 6666652 5666766543 3356 89999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCCcEEecccCC---CCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 150 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.|..|+++|.+.+ ++..++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++|..
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 211 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITL 211 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCC
Confidence 8888888886532 2333322 1223357899999999999999999999999999999998 777654
No 32
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.83 E-value=5.1e-20 Score=162.23 Aligned_cols=193 Identities=17% Similarity=0.207 Sum_probs=128.4
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEE-eccc---ccccCCCCC-CCCCCCCCC
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HLAK---QFCQLPHLP-FPSSYPMFV 78 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~~~---~~~~~~~~~-~~~~~~~~~ 78 (255)
...+||+|||||++|+++|..|++.|.+|+|||++..+||.|... +.+.... .... .+.....+. ++.....++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 346899999999999999999999999999999998788865421 1110000 0000 000011111 122222234
Q ss_pred CHHHHHHHHH-------HHH-----HhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 025254 79 SRAQFIEHLD-------HYV-----SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (255)
Q Consensus 79 ~~~~~~~~l~-------~~~-----~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG 146 (255)
+..++.+++. ..+ .+.++.+ +++.+++.++. . +|.+.. .. +.+|+||+|||
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~----~--~v~~~g--------~~-~~~d~lViATG 183 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN----H--TVEAAG--------KV-FKAKNLILAVG 183 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET----T--EEEETT--------EE-EEBSCEEECCC
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC----C--EEEECC--------EE-EEeCEEEECCC
Confidence 4666666554 333 5566654 54677777652 2 355542 67 89999999999
Q ss_pred CCCCCCCCCCCCccccccCCCCCCcEEecccCC-CCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 147 ETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 147 ~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
+.|..|+++|.+.. .+++..+.. ......+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|.
T Consensus 184 --s~p~~p~i~G~~~~--------~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~ 252 (523)
T 1mo9_A 184 --AGPGTLDVPGVNAK--------GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLI 252 (523)
T ss_dssp --EECCCCCSTTTTSB--------TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTC
T ss_pred --CCCCCCCCCCcccC--------cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-ccccc
Confidence 77888888886531 255555444 3222334899999999999999999999999999999998 67664
No 33
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.83 E-value=1.7e-20 Score=165.09 Aligned_cols=194 Identities=19% Similarity=0.176 Sum_probs=119.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC--------CCCccccc-CCCCCeEEecc----cccccCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPS 72 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~--------~~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~ 72 (255)
..+||+|||||++|+.+|..|++.|.+|+|||+.+ .+||.|.. .+.+...+... .....+..+.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 46899999999999999999999999999999964 57775432 11111000000 0000011111111
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 025254 73 SYPMFVSRAQFIEHLDH-----------YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~v 141 (255)
......+...+..+... ..+..++. .....+..++. ..+.|...++ +..+ +.||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~----~~v~v~~~~g-----~~~~-i~~d~l 177 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGP----HRIKATNNKG-----KEKI-YSAERF 177 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC-----CCCE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeC----CEEEEEcCCC-----CEEE-EECCEE
Confidence 11112333344433332 23334544 33344544432 3455544332 2257 999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCce
Q 025254 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPAC 221 (255)
Q Consensus 142 ViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~ 221 (255)
|+||| +.|..|+++|...+ .++..++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|. .
T Consensus 178 ViATG--s~p~~p~i~G~~~~---------~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~ 243 (519)
T 3qfa_A 178 LIATG--ERPRYLGIPGDKEY---------CISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--I 243 (519)
T ss_dssp EECCC--EEECCCCCTTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C
T ss_pred EEECC--CCcCCCCCCCccCc---------eEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--c
Confidence 99999 78888888886543 233333332 2344678999999999999999999999999999984 4
Q ss_pred eeccc
Q 025254 222 LWRFE 226 (255)
Q Consensus 222 ~~~~~ 226 (255)
+++..
T Consensus 244 ~l~~~ 248 (519)
T 3qfa_A 244 LLRGF 248 (519)
T ss_dssp SSTTS
T ss_pred ccccC
Confidence 56554
No 34
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=9.9e-22 Score=165.80 Aligned_cols=168 Identities=20% Similarity=0.277 Sum_probs=113.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
..|++|||||++|+.+|..|++.| +|+|||+.+..+ |.....+ .. +.. ..+..++..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~-------~~---~~g---------~~~~~~~~~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLS-------HY---IAG---------FIPRNRLFPY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHH-------HH---HTT---------SSCGGGGCSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhH-------HH---HhC---------CCCHHHhccC
Confidence 369999999999999999999999 999999987542 1111000 00 000 0111111112
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
..+++++.++.+ +.+++|+.++... +.|. .++ .+ +.||+||+||| +.|..|++||.+
T Consensus 66 ~~~~~~~~~v~~--~~g~~v~~id~~~----~~V~-~~g-------~~-~~~d~lViATG--s~p~~p~i~G~~------ 122 (367)
T 1xhc_A 66 SLDWYRKRGIEI--RLAEEAKLIDRGR----KVVI-TEK-------GE-VPYDTLVLATG--ARAREPQIKGKE------ 122 (367)
T ss_dssp CHHHHHHHTEEE--ECSCCEEEEETTT----TEEE-ESS-------CE-EECSEEEECCC--EEECCCCSBTGG------
T ss_pred CHHHHHhCCcEE--EECCEEEEEECCC----CEEE-ECC-------cE-EECCEEEECCC--CCCCCCCCCCcC------
Confidence 233345566654 7888899887643 4455 332 67 89999999999 778888888732
Q ss_pred CCCCcEEecccCCCCCC-----CCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 167 TGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 167 ~~~~~~~~~~~~~~~~~-----~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
.+++.....+... ..+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|
T Consensus 123 ----~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 180 (367)
T 1xhc_A 123 ----YLLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG 180 (367)
T ss_dssp ----GEECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT
T ss_pred ----CEEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc
Confidence 1333332221111 135899999999999999999999999999999998 7776
No 35
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.83 E-value=4.2e-21 Score=167.94 Aligned_cols=178 Identities=18% Similarity=0.236 Sum_probs=119.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC---CCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g---~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
++||+|||||++|+.+|..|++.| .+|+|||+.+..+..++.- +. + .... .. ... ++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~---------~~-~--~~~~-~~-~~~------~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGM---------AL-W--IGEQ-IA-GPE------GL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGH---------HH-H--HTTS-SS-CSG------GG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccccc---------ch-h--hcCc-cC-CHH------Hh
Confidence 489999999999999999999987 8999999988654222100 00 0 0000 00 000 00
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcc---
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLC--- 160 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~--- 160 (255)
.....+.+.+.++.+ +.+++|+.++..+ +.+.+.. ++ +..+ +.||+||+||| +.|..|++||.+
T Consensus 95 ~~~~~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~-~g-----~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~~ 161 (490)
T 2bc0_A 95 FYSDKEELESLGAKV--YMESPVQSIDYDA--KTVTALV-DG-----KNHV-ETYDKLIFATG--SQPILPPIKGAEIKE 161 (490)
T ss_dssp BSCCHHHHHHTTCEE--ETTCCEEEEETTT--TEEEEEE-TT-----EEEE-EECSEEEECCC--EEECCCSCBTCCBCT
T ss_pred hhcCHHHHHhCCCEE--EeCCEEEEEECCC--CEEEEEe-CC-----cEEE-EECCEEEECCC--CCcCCCCCCCccccc
Confidence 011123344566654 7888999998655 5555442 21 2267 89999999999 778888888875
Q ss_pred ---ccccCCCCC---CcEEecccCCCC-------CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 161 ---SFCSSATGT---GEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 161 ---~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
.| . ..+++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|
T Consensus 162 ~~~~f------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 231 (490)
T 2bc0_A 162 GSLEF------EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLA 231 (490)
T ss_dssp TCTTC------CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ccccc------ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhh
Confidence 22 1 124443322111 11458999999999999999999999999999999998 6766
No 36
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.82 E-value=3.7e-20 Score=160.29 Aligned_cols=174 Identities=18% Similarity=0.285 Sum_probs=114.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
++||+|||||++|+++|..|++. +.+|+|||+.+..+.... . ++. .........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--~--------------~p~-----~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--G--------------IPY-----VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--C--------------Ccc-----ccCCCCCHHHhh
Confidence 47999999999999999999998 789999999886542110 0 000 001111122233
Q ss_pred HHHHH-HHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 85 EHLDH-YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 85 ~~l~~-~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
.+..+ +.++.++.+ +.+++|++++. ..+.|...++ ... +.+|+||+||| +.|..|+++|.+..
T Consensus 62 ~~~~~~~~~~~gi~v--~~~~~v~~i~~----~~~~v~~~~g------~~~-~~~d~lviAtG--~~p~~p~i~G~~~~- 125 (449)
T 3kd9_A 62 YYPPEVFIKKRGIDL--HLNAEVIEVDT----GYVRVRENGG------EKS-YEWDYLVFANG--ASPQVPAIEGVNLK- 125 (449)
T ss_dssp ----CTHHHHTTCEE--ETTCEEEEECS----SEEEEECSSS------EEE-EECSEEEECCC--EEECCCSCBTTTST-
T ss_pred hcCHHHHHHhcCcEE--EecCEEEEEec----CCCEEEECCc------eEE-EEcCEEEECCC--CCCCCCCCCCCCCC-
Confidence 32222 335667665 88889998854 3455655432 147 89999999999 77888888886431
Q ss_pred cCCCCCCcEEecccCCC-------CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-------~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
.++....... .....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ ++++.
T Consensus 126 -------~v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 186 (449)
T 3kd9_A 126 -------GVFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRR 186 (449)
T ss_dssp -------TEECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTT
T ss_pred -------CEEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchh
Confidence 2333222111 012357899999999999999999999999999999998 67665
No 37
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.82 E-value=7.4e-21 Score=169.20 Aligned_cols=180 Identities=16% Similarity=0.174 Sum_probs=123.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+||+|||||++|+++|..|++. +.+|+|||+.+..+-. .... +. .+.... ......+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~--~~~l-------~~---~~~~~~-------~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA--NCGL-------PY---HISGEI-------AQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC--GGGH-------HH---HHTSSS-------CCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc--ccCc-------hH---HhcCCc-------CChHHhhcc
Confidence 5899999999999999999998 7899999999865411 0000 00 000000 001122334
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
++..+.++.++.+ +++++|++++... +.+.+..... + +..+ +.||+||+||| +.|..|++||.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~--g--~~~~-~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLD--G--SEYQ-ESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCC--C--CeEE-EECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 4455556677765 8899999998765 5555543211 1 2257 89999999999 67888888887532
Q ss_pred CCCCCcEEecccCCCC-------CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.++........ ....+++++|||+|.+|+|+|..+.+.|.+|++++|++ +++|..
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 190 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPV 190 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTS
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhc
Confidence 23333322110 11347899999999999999999999999999999998 777743
No 38
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.82 E-value=1e-20 Score=164.61 Aligned_cols=192 Identities=18% Similarity=0.183 Sum_probs=118.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEE-eccccc---ccCCCC-CCCCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HLAKQF---CQLPHL-PFPSSYPMFVS 79 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~~~~~---~~~~~~-~~~~~~~~~~~ 79 (255)
.++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+...+ ...... ...+.. ..+.. ....+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 80 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTID 80 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccC
Confidence 3589999999999999999999999999999998 578876421 1110000 000000 001111 01100 01112
Q ss_pred HHHHH-------HHHH-----HHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 025254 80 RAQFI-------EHLD-----HYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (255)
Q Consensus 80 ~~~~~-------~~l~-----~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG 146 (255)
...+. +++. +.+++. ++.+ +.+ +++.++ . ..+.|...++ +... +++|+||+|||
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~--~~g-~~~~~~--~--~~~~v~~~~g-----~~~~-~~~d~lviAtG 147 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAITV--VHG-EARFKD--D--QSLTVRLNEG-----GERV-VMFDRCLVATG 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEE--EEE-EEEEEE--T--TEEEEEETTS-----SEEE-EECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCeEE--EEE-EEEEcc--C--CEEEEEeCCC-----ceEE-EEeCEEEEeCC
Confidence 22222 2222 223333 4432 443 455553 2 4566665442 2257 89999999999
Q ss_pred CCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 147 ETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 147 ~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
+.|..|+++|.+.. .+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++++ +++|
T Consensus 148 --s~p~~p~i~G~~~~--------~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 213 (467)
T 1zk7_A 148 --ASPAVPPIPGLKES--------PYWTSTEALA-SDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR 213 (467)
T ss_dssp --EEECCCCCTTTTTS--------CCBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT
T ss_pred --CCCCCCCCCCCCcC--------ceecHHHHhc-ccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC
Confidence 77888888886532 2233333222 22347899999999999999999999999999999998 7776
No 39
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.82 E-value=1e-20 Score=168.97 Aligned_cols=183 Identities=16% Similarity=0.239 Sum_probs=126.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
.++||+|||||++|+++|..|++. +.+|+|||+.+.++ |..... +. .+.... ......+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~~~l-------p~---~~~g~~-------~~~~~~~ 95 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FANCGL-------PY---YIGGVI-------TERQKLL 95 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGGGH-------HH---HHTTSS-------CCGGGGB
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccCCCC-------ch---hhcCcC-------CChHHhh
Confidence 357999999999999999999998 88999999998654 110000 00 000000 0111223
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
..++..+.+++++.+ +++++|++++..+ +.+.+..... + +... +.+|+||+||| +.|..|+++|....
T Consensus 96 ~~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~--g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~- 163 (588)
T 3ics_A 96 VQTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTT--N--ETYN-EAYDVLILSPG--AKPIVPSIPGIEEA- 163 (588)
T ss_dssp SSCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCCCTTTTTC-
T ss_pred ccCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCC--C--CEEE-EeCCEEEECCC--CCCCCCCCCCcccC-
Confidence 445566667777765 8999999998765 5555543211 1 2247 89999999999 77888888887332
Q ss_pred cCCCCCCcEEecccCCCCC-------CCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 164 SSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~-------~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
. .++......... ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++|..
T Consensus 164 -----~-~v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 226 (588)
T 3ics_A 164 -----K-ALFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPI 226 (588)
T ss_dssp -----T-TEEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred -----C-CeEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccC
Confidence 2 244443322111 1357899999999999999999999999999999998 777753
No 40
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.82 E-value=1.7e-20 Score=164.21 Aligned_cols=195 Identities=17% Similarity=0.188 Sum_probs=117.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEeccccccc-----CCCCCCCCCCCCCCCH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQFCQ-----LPHLPFPSSYPMFVSR 80 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 80 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. .+.+..........+. +..+....... ..+.
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~-~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP-KLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-EECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-ccCH
Confidence 489999999999999999999999999999998889986542 1111110000000000 11111110000 0111
Q ss_pred HHHH-----------HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 81 AQFI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 81 ~~~~-----------~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
..+. ..+.......++.. ..+ ....+ . ...+.|...++ +..+ +.+|+||+|||+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~~--~--~~~~~v~~~~g-----~~~~-~~~d~lViATGs-- 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQG-TGKVL--G--QGKVSVTNEKG-----EEQV-LEAKNVVIATGS-- 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-EEEEC--S--SSEEEEECTTS-----CEEE-EECSEEEECCCE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEe--c--CCEEEEEeCCC-----ceEE-EEeCEEEEccCC--
Confidence 1222 22233344455543 333 33222 1 24555654432 2367 999999999994
Q ss_pred CCCCCCCCCccc-cccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 150 NPFTPDIRGLCS-FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 150 ~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.| +.+||... + .+..++...........+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++..
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~ 237 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGM 237 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSS
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccC
Confidence 43 34566542 2 333334333333344568999999999999999999999999999999998 677643
No 41
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.82 E-value=1.9e-19 Score=156.86 Aligned_cols=193 Identities=11% Similarity=0.070 Sum_probs=122.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEeccc----ccc--cCCCCCCCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFC--QLPHLPFPSSYPMFV 78 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~ 78 (255)
.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+...+.... .+. .+.....+.. ....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCcc
Confidence 35899999999999999999999999999999998898876421 11100000000 000 0000000000 0001
Q ss_pred CHHHHH-----------HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 79 SRAQFI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 79 ~~~~~~-----------~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+...+. ..+.+.+++.++.+ +.+. +..+ +. +.+.|...++ ...+ +.||+||+|||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~-~~~~--~~--~~~~v~~~~g-----g~~~-~~~d~lViAtG- 149 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGY-GKIT--GK--NQVTATKADG-----GTQV-IDTKNILIATG- 149 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEE--ET--TEEEEECTTS-----CEEE-EEEEEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe--cC--CEEEEEecCC-----CcEE-EEeCEEEECCC-
Confidence 112222 12344555666654 6654 3333 22 5666665431 1157 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 148 ~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
+.|..|+++|.+.. .+++..+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++++++ +++|
T Consensus 150 -s~p~~p~i~g~~~~--------~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 215 (474)
T 1zmd_A 150 -SEVTPFPGITIDED--------TIVSSTGALSL-KKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGG 215 (474)
T ss_dssp -EEECCCTTCCCCSS--------SEECHHHHTTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSC
T ss_pred -CCCCCCCCCCCCcC--------cEEcHHHHhhc-cccCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCC
Confidence 67888887776421 35555544432 2246899999999999999999999999999999998 7777
No 42
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.81 E-value=2.6e-20 Score=162.21 Aligned_cols=185 Identities=13% Similarity=0.154 Sum_probs=110.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
++||+|||||++|+++|..|++. +.+|+|||+.+.++ |.....+.. +. ..+......++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~----------~~-g~~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYY----------VS-GEVSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchh----------hc-CCCCchHHhccccchhc
Confidence 47999999999999999999998 88999999998653 111000000 00 00000000000011234
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
.+...+.++.++.+ +++++|++++... ..+.+.... ++ +... +.+|+||+||| +.|..|+++|.+.
T Consensus 70 ~~~~~~~~~~gi~~--~~~~~V~~id~~~--~~v~~~~~~--~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~--- 135 (472)
T 3iwa_A 70 RDPEFFRINKDVEA--LVETRAHAIDRAA--HTVEIENLR--TG--ERRT-LKYDKLVLALG--SKANRPPVEGMDL--- 135 (472)
T ss_dssp -----------CEE--ECSEEEEEEETTT--TEEEEEETT--TC--CEEE-EECSEEEECCC--EEECCCSCTTTTS---
T ss_pred cCHHHHhhhcCcEE--EECCEEEEEECCC--CEEEEeecC--CC--CEEE-EECCEEEEeCC--CCcCCCCCCCCCC---
Confidence 45555555566655 8899999998765 555554411 11 2257 89999999999 7788888888752
Q ss_pred CCCCCCcEEecccCCC-------CCCCCCCeEEEEcCCcCHHHHHHHHhhh-cCeEEEEEecCceeec
Q 025254 165 SATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSPACLWR 224 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~-------~~~~~~~~v~ViG~g~~~~e~a~~l~~~-g~~v~~~~r~~~~~~~ 224 (255)
. .+++.....+ -....+++++|||+|.+|+|+|..+.+. |.+|+++.+.+ +++|
T Consensus 136 ----~-~v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~ 197 (472)
T 3iwa_A 136 ----A-GVTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMP 197 (472)
T ss_dssp ----B-TEEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSST
T ss_pred ----C-CEEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccc
Confidence 2 2333322211 0113478999999999999999999999 99999999998 6776
No 43
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.81 E-value=1.6e-19 Score=157.15 Aligned_cols=197 Identities=11% Similarity=0.115 Sum_probs=123.1
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEeccc----cccc-CCCCCCC--C---C
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQ-LPHLPFP--S---S 73 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~~----~~~~-~~~~~~~--~---~ 73 (255)
..++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+........ .+.. +...... . .
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 346899999999999999999999999999999998888866421 11100000000 0000 0000000 0 0
Q ss_pred CCCCCC-HH----HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCC
Q 025254 74 YPMFVS-RA----QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (255)
Q Consensus 74 ~~~~~~-~~----~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~ 148 (255)
+..+.. .. .+...+...+.+.++.+ +.+..+. + +. +.+.|...++ +... +++|+||+|||
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~~~v~~~~G-----~~~~-i~~d~lIiAtG-- 148 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVTY--VKGYGKF-V--SP--SEISVDTIEG-----ENTV-VKGKHIIIATG-- 148 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEEE-E--ET--TEEEECCSSS-----CCEE-EECSEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--cC--CEEEEEeCCC-----ceEE-EEcCEEEECCC--
Confidence 000000 01 12223344555667654 7776543 3 22 4566654332 1257 89999999999
Q ss_pred CCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 149 TNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 149 s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
+.|..|+++|.+. ..+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++++ +++|..
T Consensus 149 s~p~~p~~~g~~~--------~~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~ 216 (470)
T 1dxl_A 149 SDVKSLPGVTIDE--------KKIVSSTGALA-LSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTM 216 (470)
T ss_dssp EEECCBTTBCCCS--------SSEECHHHHTT-CSSCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTS
T ss_pred CCCCCCCCCCCCc--------ccEEeHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccc
Confidence 6777777777532 13455544433 22357899999999999999999999999999999998 677643
No 44
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.81 E-value=3.3e-20 Score=161.79 Aligned_cols=198 Identities=17% Similarity=0.222 Sum_probs=118.2
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEeccc----ccccCCCCCCCCC--
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSS-- 73 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~-- 73 (255)
|+.+...+||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. .+.+...+.... .+.....+.+...
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 444444689999999999999999999999999999998 57876642 111100000000 0000111111100
Q ss_pred --C-CCCCCHHHHHH-----------HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeC
Q 025254 74 --Y-PMFVSRAQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (255)
Q Consensus 74 --~-~~~~~~~~~~~-----------~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d 139 (255)
. ....+...+.+ .+...++..++.+ ..+ +++.+ . ...+.|...++ +... +.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i--~--~~~~~v~~~~g-----~~~~-~~~d 150 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDV--VFG-WARFN--K--DGNVEVQKRDN-----TTEV-YSAN 150 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEE--EEE-EEEEC--T--TSCEEEEESSS-----CCEE-EEEE
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEe--e--CCEEEEEeCCC-----cEEE-EEeC
Confidence 0 01122222222 2233344455543 444 34443 2 24566665443 1147 8999
Q ss_pred EEEEeecCCCCCCCC-CCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEec
Q 025254 140 FLVVASGETTNPFTP-DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (255)
Q Consensus 140 ~vViAtG~~s~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~ 218 (255)
+||+||| +.|..| ++||.+.. ++..++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.
T Consensus 151 ~lviAtG--s~p~~p~~i~g~~~~----------~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 151 HILVATG--GKAIFPENIPGFELG----------TDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp EEEECCC--EEECCCTTSTTGGGS----------BCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEcCC--CCCCCCCCCCCcccc----------cchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999 778888 78876321 22222221 1235789999999999999999999999999999999
Q ss_pred Cceeeccc
Q 025254 219 PACLWRFE 226 (255)
Q Consensus 219 ~~~~~~~~ 226 (255)
+ +++|..
T Consensus 218 ~-~~l~~~ 224 (479)
T 2hqm_A 218 E-TVLRKF 224 (479)
T ss_dssp S-SSCTTS
T ss_pred C-cccccc
Confidence 8 677654
No 45
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.81 E-value=1.6e-19 Score=158.08 Aligned_cols=197 Identities=16% Similarity=0.157 Sum_probs=118.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhh-CCCCeEEEe--------ccCCCCccccc-CCCCCeEEeccc----ccccCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFP 71 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie--------~~~~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 71 (255)
.++||+|||||++|+++|..|++ .|.+|+||| +...+||.|.. .+.+...+.... .+.....+.+.
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 35899999999999999999999 999999999 34567776542 111110000000 00001111111
Q ss_pred CCCC-CCCCHHHHHHHHHH-----------HHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCC-CceeeEEEe
Q 025254 72 SSYP-MFVSRAQFIEHLDH-----------YVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSP-GREIEEYYS 137 (255)
Q Consensus 72 ~~~~-~~~~~~~~~~~l~~-----------~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~-~~~~~~~i~ 137 (255)
...+ ...+..++.++..+ .+++. ++.+ +.+ +++.++ . . +|.+.+..+. ...... +.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g-~~~~i~--~--~--~v~v~~~~~~~~~~~~~-~~ 155 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDF--FLG-WGSLES--K--N--VVVVRETADPKSAVKER-LQ 155 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEE--EES-EEEEEE--T--T--EEEEESSSSTTSCEEEE-EE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE--EEe-EEEEee--C--C--EEEEeecCCccCCCCeE-EE
Confidence 0000 01222333333322 23344 5543 554 455542 1 2 3555421110 000167 99
Q ss_pred eCEEEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhh---cCeEEE
Q 025254 138 GRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSL 214 (255)
Q Consensus 138 ~d~vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~---g~~v~~ 214 (255)
||+||+||| +.|..|+++|.+. +++..++.. ....+++++|||+|.+|+|+|..+.+. |.+|++
T Consensus 156 ~d~lViATG--s~p~~p~i~G~~~----------~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtl 222 (495)
T 2wpf_A 156 ADHILLATG--SWPQMPAIPGIEH----------CISSNEAFY-LPEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTL 222 (495)
T ss_dssp EEEEEECCC--EEECCCCCTTGGG----------CEEHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEE
T ss_pred cCEEEEeCC--CCcCCCCCCCccc----------cccHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEE
Confidence 999999999 7788888887642 244444433 223478999999999999999999999 999999
Q ss_pred EEecCceeeccc
Q 025254 215 VVRSPACLWRFE 226 (255)
Q Consensus 215 ~~r~~~~~~~~~ 226 (255)
+++.+ +++|..
T Consensus 223 v~~~~-~~l~~~ 233 (495)
T 2wpf_A 223 CYRNN-LILRGF 233 (495)
T ss_dssp EESSS-SSCTTS
T ss_pred EEcCC-cccccc
Confidence 99998 777653
No 46
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.81 E-value=7.7e-20 Score=160.28 Aligned_cols=192 Identities=17% Similarity=0.216 Sum_probs=111.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEe----cccccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLH----LAKQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
++||+|||||++|+++|..|++.|.+|+|||+.. +||.|... +.+...+. ....+.....+.+... ...+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 3799999999999999999999999999999985 77766421 11100000 0000000111111111 111222
Q ss_pred HH-----------HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcc------cCCCCceeeEEEeeCEEEEe
Q 025254 82 QF-----------IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN------LLSPGREIEEYYSGRFLVVA 144 (255)
Q Consensus 82 ~~-----------~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~------~~~~~~~~~~~i~~d~vViA 144 (255)
.+ ...+...+++.++.+ +.+. ++.++. ..+.+.... ..++ +..+ +.||+||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~id~----~~v~v~~~~~~~~~~~~~~--~~~~-~~~d~lViA 148 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGT-ASFLSE----NRILIKGTKDNNNKDNGPL--NEEI-LEGRNILIA 148 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CCCC---------------------------------CBSSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEeeC----CEEEEEeccccccccccCC--CceE-EEeCEEEEC
Confidence 22 222334445556554 5543 222221 223332100 0000 0157 899999999
Q ss_pred ecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 145 SGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 145 tG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
|| +.|..|+++|.+. .++..++..... +++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|
T Consensus 149 tG--s~p~~p~i~G~~~----------~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 213 (500)
T 1onf_A 149 VG--NKPVFPPVKGIEN----------TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILR 213 (500)
T ss_dssp CC--CCBCCCSCTTGGG----------CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCT
T ss_pred CC--CCCCCCCCCCCCc----------ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCc
Confidence 99 7788888888642 245554443222 7899999999999999999999999999999998 7776
Q ss_pred cc
Q 025254 225 FE 226 (255)
Q Consensus 225 ~~ 226 (255)
..
T Consensus 214 ~~ 215 (500)
T 1onf_A 214 KF 215 (500)
T ss_dssp TS
T ss_pred cc
Confidence 53
No 47
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.81 E-value=2.7e-20 Score=159.58 Aligned_cols=175 Identities=19% Similarity=0.182 Sum_probs=118.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCC--eEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~--v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
.++||+|||||++|+++|..|++.|++ |+|+|+.+..+.... ..... +. ........+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~---------~l~~~---~~--------~~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP---------PLSKE---YL--------AREKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG---------GGGTT---TT--------TTSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc---------cCCHH---HH--------cCCCCHHHh
Confidence 458999999999999999999999986 999999886531100 00000 00 000011111
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
.....++..+.++.+ +.+++|+.++... ..|.+.++ .. +.||+||+||| +.|..|+++|.+..
T Consensus 68 ~~~~~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~~- 130 (415)
T 3lxd_A 68 CIRPAQFWEDKAVEM--KLGAEVVSLDPAA----HTVKLGDG-------SA-IEYGKLIWATG--GDPRRLSCVGADLA- 130 (415)
T ss_dssp BSSCHHHHHHTTEEE--EETCCEEEEETTT----TEEEETTS-------CE-EEEEEEEECCC--EECCCCBTTSSCCB-
T ss_pred ccCCHHHHHHCCcEE--EeCCEEEEEECCC----CEEEECCC-------CE-EEeeEEEEccC--CccCCCCCCCcccc-
Confidence 112233445566655 8888999997643 34666554 67 89999999999 77888888876421
Q ss_pred cCCCCCCcEEecccCCC-----CCCCC-CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 164 SSATGTGEVIHSTQYKN-----GKPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~-----~~~~~-~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
.++......+ ..... +++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++.
T Consensus 131 -------~v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~ 190 (415)
T 3lxd_A 131 -------GVHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLAR 190 (415)
T ss_dssp -------TEECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTT
T ss_pred -------CEEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhh
Confidence 2332221111 01113 7899999999999999999999999999999998 66654
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.81 E-value=1.1e-19 Score=158.80 Aligned_cols=193 Identities=16% Similarity=0.168 Sum_probs=117.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEec--------cCCCCccccc-CCCCCeEEeccc----ccccCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILER--------ENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPS 72 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~--------~~~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~ 72 (255)
..+||+|||||++|+.+|..|++.|.+|+|||+ ...+||.|.. .+.+...+.... .......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 468999999999999999999999999999997 4467876532 111111000000 000011111111
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 025254 73 SYPMFVSRAQFIEHLDH-----------YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~v 141 (255)
......+...+..+..+ .+...++. ....++..++ ...+.|...++ +..+ +.||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g-----~~~~-~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGG-----KATL-LSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTS-----CEEE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCC-----ceEE-EECCEE
Confidence 11122333344433322 23334444 3333443321 24455554332 2267 999999
Q ss_pred EEeecCCCCCCCCC-CCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCc
Q 025254 142 VVASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPA 220 (255)
Q Consensus 142 ViAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~ 220 (255)
|+||| +.|..|+ +||.... .++..++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|..
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~- 218 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFW-LKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI- 218 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-
Confidence 99999 7888888 8887543 133333332 23357789999999999999999999999999999864
Q ss_pred eeecc
Q 025254 221 CLWRF 225 (255)
Q Consensus 221 ~~~~~ 225 (255)
+++.
T Consensus 219 -~l~~ 222 (488)
T 3dgz_A 219 -PLRG 222 (488)
T ss_dssp -SSTT
T ss_pred -cccc
Confidence 4443
No 49
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.81 E-value=3.3e-20 Score=161.80 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=116.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEE-e---cccccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRL-H---LAKQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+.+|..|++.|.+|+|||+. .+||.|.. .+.+...+ . ....+.....+.+... ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 589999999999999999999999999999987 57775432 11111000 0 0000011111111111 1122333
Q ss_pred HHHHHH-----------HHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 82 QFIEHL-----------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 82 ~~~~~l-----------~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.+.++. ...++..++.. ..+ ++..+. ...+.|.... .+ +++|+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~~~----~~~~~v~~~g--------~~-~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRG-HAAFTS----DPKPTIEVSG--------KK-YTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEECS----CSSCEEEETT--------EE-EECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEe-EEEEee----CCeEEEEECC--------EE-EEeeEEEEccC--CC
Confidence 333332 23333445443 333 333322 1335565332 67 99999999999 77
Q ss_pred CCCC---CCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecccc
Q 025254 151 PFTP---DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQ 227 (255)
Q Consensus 151 ~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~ 227 (255)
|..| +++|.+.. .+...+.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ ++++..+
T Consensus 160 p~~p~~~~i~G~~~~----------~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d 227 (478)
T 3dk9_A 160 PSTPHESQIPGASLG----------ITSDGFFQ-LEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFD 227 (478)
T ss_dssp ECCCCTTTSTTGGGS----------BCHHHHTT-CCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSC
T ss_pred CCCCCcCCCCCCcee----------EchHHhhc-hhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccC
Confidence 8888 77776422 23333332 23347899999999999999999999999999999988 6666543
No 50
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.81 E-value=1e-19 Score=155.63 Aligned_cols=175 Identities=20% Similarity=0.207 Sum_probs=114.7
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (255)
|+.+..++||+|||||++|+++|..|++.|. +|+|+|+.+.++. ..... +..+..-.. .+..
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~~~-------~~~~~~~~~---~~~~---- 64 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY--DRPPL-------SKDFMAHGD---AEKI---- 64 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB--CSGGG-------GTHHHHHCC---GGGS----
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc--cCCCC-------CHHHhCCCc---hhhh----
Confidence 6554456899999999999999999999987 5999999875431 00000 000000000 0000
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCC-C
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-R 157 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~-~ 157 (255)
++. .+.+.++.+ +.+++|++++... ++|.+.++ .+ +.+|+||+||| +.|..|++ +
T Consensus 65 -------~~~-~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 65 -------RLD-CKRAPEVEW--LLGVTAQSFDPQA----HTVALSDG-------RT-LPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp -------BCC-CTTSCSCEE--EETCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCGGGT
T ss_pred -------hHH-HHHHCCCEE--EcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCCCCccC
Confidence 000 223445544 8888899987643 45666553 57 89999999999 67777777 7
Q ss_pred CccccccCCCCCCcEEecccCCC-----CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 158 GLCSFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
|.+ . .+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|.
T Consensus 121 G~~-~--------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 183 (408)
T 2gqw_A 121 GAT-M--------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSR 183 (408)
T ss_dssp TCS-S--------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred CCC-C--------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccc
Confidence 753 1 2333222211 122347899999999999999999999999999999998 67664
No 51
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.81 E-value=4.6e-20 Score=159.01 Aligned_cols=182 Identities=16% Similarity=0.160 Sum_probs=117.3
Q ss_pred eEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCC-CCCHHHHHH
Q 025254 9 EVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPM-FVSRAQFIE 85 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 85 (255)
+|+|||||++|+++|..|++.|. +|+|||+++....... .. +..+ ... ..+.... ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~--~l-------~~~~---~~~-~~~~~~~~~~~~----- 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC--AL-------PYVI---GEV-VEDRRYALAYTP----- 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG--GH-------HHHH---TTS-SCCGGGTBCCCH-----
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc--hh-------HHHH---cCC-ccchhhhhhcCH-----
Confidence 69999999999999999999874 7999999875432110 00 0000 000 0000000 0111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
..+.++.++.. +.+++|++++... ....+...... +... +.||+||+||| ++|..|+++|...+
T Consensus 64 --~~~~~~~~i~~--~~~~~V~~id~~~--~~~~~~~~~~~----~~~~-~~yd~lVIATG--s~p~~p~i~g~~~~--- 127 (437)
T 4eqs_A 64 --EKFYDRKQITV--KTYHEVIAINDER--QTVSVLNRKTN----EQFE-ESYDKLILSPG--ASANSLGFESDITF--- 127 (437)
T ss_dssp --HHHHHHHCCEE--EETEEEEEEETTT--TEEEEEETTTT----EEEE-EECSEEEECCC--EEECCCCCCCTTEE---
T ss_pred --HHHHHhcCCEE--EeCCeEEEEEccC--cEEEEEeccCC----ceEE-EEcCEEEECCC--CccccccccCceEE---
Confidence 12344556665 8899999998755 44444433322 3367 89999999999 77888888775443
Q ss_pred CCCCCcEEecccCCCC--CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccccc
Q 025254 166 ATGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQV 228 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~--~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~~ 228 (255)
....+........ ....+++++|||+|.+|+|+|..+.++|.+|+++++++ +++|..+.
T Consensus 128 ---~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~ 188 (437)
T 4eqs_A 128 ---TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDA 188 (437)
T ss_dssp ---CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCG
T ss_pred ---eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccc
Confidence 1111100000000 11246899999999999999999999999999999999 78876643
No 52
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.81 E-value=1.7e-19 Score=156.68 Aligned_cols=191 Identities=15% Similarity=0.164 Sum_probs=115.7
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEecccc----cccCCCCCCCCCCC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPSSYP 75 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~ 75 (255)
|.+|. .+||+|||||++|+.+|..|++.|.+|+|||+.. +||.|... +.+......... +.....+.... .
T Consensus 1 m~~m~-~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~--~ 76 (464)
T 2eq6_A 1 MTPMK-TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA--K 76 (464)
T ss_dssp ---CE-EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC--C
T ss_pred CCCcc-cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC--C
Confidence 54443 5899999999999999999999999999999987 78765321 111000000000 00000001100 0
Q ss_pred CCCCHHHHH-------HH----HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEe
Q 025254 76 MFVSRAQFI-------EH----LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVA 144 (255)
Q Consensus 76 ~~~~~~~~~-------~~----l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViA 144 (255)
...+...+. ++ +...+++.++.+ +.+..+ .++ . . +|.+. + .+ ++||+||+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~-~~~--~--~--~v~v~-g-------~~-~~~d~lViA 138 (464)
T 2eq6_A 77 PELDLKKLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFAR-LVG--P--K--EVEVG-G-------ER-YGAKSLILA 138 (464)
T ss_dssp CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEE-EEE--T--T--EEEET-T-------EE-EEEEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEE-Ecc--C--C--EEEEc-c-------EE-EEeCEEEEc
Confidence 011212222 22 233445556654 665433 332 2 3 34444 2 67 899999999
Q ss_pred ecCCCCCCCCC-CCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 145 SGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 145 tG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
|| ++|..|+ +++. +.+++..+........+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++
T Consensus 139 TG--s~p~~p~gi~~~----------~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 205 (464)
T 2eq6_A 139 TG--SEPLELKGFPFG----------EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EIL 205 (464)
T ss_dssp CC--EEECCBTTBCCS----------SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSS
T ss_pred CC--CCCCCCCCCCCC----------CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccc
Confidence 99 6677664 5441 12455544443222257899999999999999999999999999999998 677
Q ss_pred ccc
Q 025254 224 RFE 226 (255)
Q Consensus 224 ~~~ 226 (255)
|..
T Consensus 206 ~~~ 208 (464)
T 2eq6_A 206 PQG 208 (464)
T ss_dssp TTS
T ss_pred ccc
Confidence 643
No 53
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.81 E-value=5.2e-20 Score=159.20 Aligned_cols=166 Identities=17% Similarity=0.189 Sum_probs=116.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.+. ++ .+....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip---------~~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IP---------GFKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SC---------TTTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CC---------CccCCHHHHH
Confidence 46899999999999999999999999999999999888877532 11 1111235666
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
+..+++.+.++.+ +.++.|. .. +++.+ .. +.||+||+|+|+. .|..++++|.+.
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~--------~~--v~~~~--------~~-~~~d~vvlAtG~~-~~~~~~ipG~~~---- 230 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG--------RD--ASLPE--------LR-RKHVAVLVATGVY-KARDIKAPGSGL---- 230 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT--------TT--BCHHH--------HH-SSCSEEEECCCCC-EECCTTCSCCTT----
T ss_pred HHHHHHHHCCcEE--EeCCEec--------cE--EEhhH--------hH-hhCCEEEEecCCC-CCCCCCCCCCcC----
Confidence 7777788888765 7776541 11 22222 34 6799999999953 356677777642
Q ss_pred CCCCCcEEecccC---------CC--------CCCCCCCeEEEEcCCcCHHHHHHHHhhhcC-eEEEEEecCceeecc
Q 025254 166 ATGTGEVIHSTQY---------KN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSPACLWRF 225 (255)
Q Consensus 166 ~~~~~~~~~~~~~---------~~--------~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~-~v~~~~r~~~~~~~~ 225 (255)
. .+++..++ .. .....+++++|||+|.+|+|+|..+.++|. +|+++.|++...+|.
T Consensus 231 ---~-gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~ 304 (456)
T 2vdc_G 231 ---G-NIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPG 304 (456)
T ss_dssp ---T-TEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSS
T ss_pred ---C-CcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCC
Confidence 2 23332211 00 122468999999999999999999999997 599999988322553
No 54
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.80 E-value=3.2e-20 Score=160.81 Aligned_cols=179 Identities=17% Similarity=0.211 Sum_probs=118.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+||+|||||++|+++|..|++. |.+|+|||+.+..+..... . +. + ... .... .+..++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~--~-------~~-~--~~g-~~~~-----~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG--I-------AL-Y--LGK-EIKN-----NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG--H-------HH-H--HTT-CBGG-----GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc--c-------hh-h--hcC-Cccc-----CCHHHhhh
Confidence 5899999999999999999998 8999999998865421110 0 00 0 000 0000 00001111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
.+.+.+.+.++.+ +.+++|+.++..+ +.+.+..... + +..+ +.+|+||+||| ++|..|+++|.+.
T Consensus 63 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~~--g--~~~~-~~~d~lviAtG--s~p~~p~i~g~~~---- 127 (452)
T 2cdu_A 63 SSPEELSNLGANV--QMRHQVTNVDPET--KTIKVKDLIT--N--EEKT-EAYDKLIMTTG--SKPTVPPIPGIDS---- 127 (452)
T ss_dssp CCHHHHHHTTCEE--EESEEEEEEEGGG--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred cCHHHHHHcCCEE--EeCCEEEEEEcCC--CEEEEEecCC--C--ceEE-EECCEEEEccC--CCcCCCCCCCCCC----
Confidence 1223345566654 7888999998655 5544443211 1 1267 99999999999 7788888888642
Q ss_pred CCCCCcEEecccCCCC-----CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
..+++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|
T Consensus 128 ----~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 186 (452)
T 2cdu_A 128 ----SRVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLY 186 (452)
T ss_dssp ----TTEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTT
T ss_pred ----CCEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhh
Confidence 234544332211 12357899999999999999999999999999999998 6766
No 55
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.80 E-value=4.4e-19 Score=154.32 Aligned_cols=195 Identities=14% Similarity=0.129 Sum_probs=121.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEEeccc----cccc-CCCCCCCCCCCCCCCH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQ-LPHLPFPSSYPMFVSR 80 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~ 80 (255)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+........ .+.. +..+..+.......+.
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999998888865421 11100000000 0000 0000000000000111
Q ss_pred HHH-----------HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 81 AQF-----------IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 81 ~~~-----------~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
..+ ...+.+.+++.++.+ +.+..+ .++ . +.+.|...++ +... +.+|+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i~--~--~~~~v~~~~G-----~~~~-~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FET--A--HSIRVNGLDG-----KQEM-LETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EEE--T--TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Eee--C--CEEEEEecCC-----ceEE-EEcCEEEECCC--C
Confidence 122 222344555667654 555433 332 2 5566665442 2257 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 150 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.|..|+++|.+. ..+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|..
T Consensus 147 ~p~~p~~~g~~~--------~~v~t~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~ 213 (468)
T 2qae_A 147 EPTELPFLPFDE--------KVVLSSTGALA-LPRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTL 213 (468)
T ss_dssp EECCBTTBCCCS--------SSEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred CcCCCCCCCCCc--------CceechHHHhh-cccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccC
Confidence 777777777542 13455444433 22357899999999999999999999999999999998 777743
No 56
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.80 E-value=9.6e-20 Score=154.63 Aligned_cols=172 Identities=16% Similarity=0.201 Sum_probs=119.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
++||+|||||++|+++|..|++.|. +|+++|++. ++.|....+.. .........++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~~-------------------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLST-------------------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGGG-------------------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcccccH-------------------HHhCCCCHHHhh
Confidence 5899999999999999999999984 689999875 33332211100 001112223332
Q ss_pred H-HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 85 E-HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 85 ~-~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
. ++..++++.++.+ +.+++|+.++..+ .+|.+.+ .. +.+|+||+||| +.|..|+++|.+.
T Consensus 63 ~~~~~~~~~~~~v~~--~~~~~v~~i~~~~----~~v~~~~--------~~-~~~d~lviAtG--~~p~~p~i~g~~~-- 123 (384)
T 2v3a_A 63 MAEPGAMAEQLNARI--LTHTRVTGIDPGH----QRIWIGE--------EE-VRYRDLVLAWG--AEPIRVPVEGDAQ-- 123 (384)
T ss_dssp EECHHHHHHHTTCEE--ECSCCCCEEEGGG----TEEEETT--------EE-EECSEEEECCC--EEECCCCCBSTTT--
T ss_pred ccCHHHHHHhCCcEE--EeCCEEEEEECCC----CEEEECC--------cE-EECCEEEEeCC--CCcCCCCCCCcCc--
Confidence 2 3455566677664 7788888887643 3455543 57 89999999999 7788888877542
Q ss_pred cCCCCCCcEEecccCCCC-----CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 164 SSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
..+++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++.
T Consensus 124 ------~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~ 183 (384)
T 2v3a_A 124 ------DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPG 183 (384)
T ss_dssp ------TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred ------CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhc
Confidence 234544443221 11247899999999999999999999999999999988 66664
No 57
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.80 E-value=2.4e-19 Score=155.19 Aligned_cols=187 Identities=19% Similarity=0.198 Sum_probs=114.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEecccc----cc-cCCCCCCCCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAKQ----FC-QLPHLPFPSSYPMFVS 79 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~ 79 (255)
.++||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. .+.+...+..... +. ....+.+... ....+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~ 80 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFN 80 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEEC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccC
Confidence 3589999999999999999999999999999998 57776531 1110000000000 00 0000000000 00011
Q ss_pred HHHHHH-----------HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCC
Q 025254 80 RAQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (255)
Q Consensus 80 ~~~~~~-----------~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~ 148 (255)
...+.. .+...+.+.++.. +.+ +++.++ . . .|.+ ++ .. +.+|+||+|||
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~--~--~--~v~~-~g-------~~-~~~d~lviAtG-- 140 (450)
T 1ges_A 81 WETLIASRTAYIDRIHTSYENVLGKNNVDV--IKG-FARFVD--A--K--TLEV-NG-------ET-ITADHILIATG-- 140 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CCEEEE--T--T--EEEE-TT-------EE-EEEEEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEec--C--C--EEEE-CC-------EE-EEeCEEEECCC--
Confidence 222222 2223334556553 544 344443 1 2 3544 22 67 89999999999
Q ss_pred CCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 149 TNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 149 s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
+.|..|++||.+.. ++..++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|..
T Consensus 141 s~p~~p~i~g~~~~----------~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 206 (450)
T 1ges_A 141 GRPSHPDIPGVEYG----------IDSDGFFA-LPALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSF 206 (450)
T ss_dssp EEECCCCSTTGGGS----------BCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred CCCCCCCCCCccce----------ecHHHhhh-hhhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhh
Confidence 77888888876422 22222222 12247899999999999999999999999999999998 666643
No 58
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.80 E-value=4.1e-20 Score=159.91 Aligned_cols=177 Identities=16% Similarity=0.108 Sum_probs=117.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+||+|||||++|+.+|..|++. |.+|+|||+.+..+...+ .. +. +..... .+..++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~--~~-------~~--~~~~~~---------~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA--GM-------QL--YLEGKV---------KDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG--GH-------HH--HHTTSS---------CCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc--cc-------hh--hhcCcc---------CCHHHhhc
Confidence 4899999999999999999998 899999999886542100 00 00 000000 00011111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
++.+.+.+.++.+ +.+++|++++..+ +.+.+.... ++ +..+ +.||+||+||| +.|..|++||.+.
T Consensus 61 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~~~~~~--~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~---- 125 (447)
T 1nhp_A 61 MTGEKMESRGVNV--FSNTEITAIQPKE--HQVTVKDLV--SG--EERV-ENYDKLIISPG--AVPFELDIPGKDL---- 125 (447)
T ss_dssp CCHHHHHHTTCEE--EETEEEEEEETTT--TEEEEEETT--TC--CEEE-EECSEEEECCC--EEECCCCSTTTTS----
T ss_pred CCHHHHHHCCCEE--EECCEEEEEeCCC--CEEEEEecC--CC--ceEE-EeCCEEEEcCC--CCcCCCCCCCCCC----
Confidence 1223344556654 7899999987655 554443311 11 2257 89999999999 7788888888642
Q ss_pred CCCCCcEEecccCCCC-------CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
. .+++...+.+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++
T Consensus 126 ---~-~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~ 186 (447)
T 1nhp_A 126 ---D-NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLG 186 (447)
T ss_dssp ---B-SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ---C-CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-cccc
Confidence 1 24444332210 11157899999999999999999999999999999988 6665
No 59
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.80 E-value=3.5e-19 Score=154.70 Aligned_cols=186 Identities=18% Similarity=0.236 Sum_probs=114.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEecc----cccccCCCCCCCCCCCCCCCH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSR 80 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 80 (255)
.++||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. .+.+...+... ..+.....+.+... ....+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~ 80 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDW 80 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCH
Confidence 3589999999999999999999999999999998 57876642 11110000000 00000011111100 001222
Q ss_pred HHHHHH-----------HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 81 AQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 81 ~~~~~~-----------l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
..+.++ +...+.+.++.. +.+ +++.++ . ..|.+ ++ .+ +.+|+||+||| +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~--~----~~v~~-~g-------~~-~~~d~lviAtG--s 140 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITR--VDG-HARFVD--A----HTIEV-EG-------QR-LSADHIVIATG--G 140 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEE--T----TEEEE-TT-------EE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEe-EEEEcc--C----CEEEE-CC-------EE-EEcCEEEECCC--C
Confidence 222222 223334556553 554 344442 1 23555 22 67 89999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 150 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
.|..|++||.+.. ++..++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++++++ ++++.
T Consensus 141 ~p~~p~i~G~~~~----------~~~~~~~~-~~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~ 204 (463)
T 2r9z_A 141 RPIVPRLPGAELG----------ITSDGFFA-LQQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQ 204 (463)
T ss_dssp EECCCSCTTGGGS----------BCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTT
T ss_pred CCCCCCCCCccce----------ecHHHHhh-hhccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccc
Confidence 7888888876322 22322222 12247899999999999999999999999999999998 66654
No 60
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.80 E-value=5e-19 Score=154.55 Aligned_cols=193 Identities=19% Similarity=0.189 Sum_probs=116.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC---------CCCccccc-CCCCCeEEeccc----ccccCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN---------CYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFP 71 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~---------~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 71 (255)
..+||+|||||++|+.+|..|++.|.+|+|||+.. .+||.|.. .+.+...+.... .......+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 46899999999999999999999999999999421 36776532 111110000000 00000011111
Q ss_pred CCCCCCCCHHHHHHHHHHH-----------HHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCE
Q 025254 72 SSYPMFVSRAQFIEHLDHY-----------VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (255)
Q Consensus 72 ~~~~~~~~~~~~~~~l~~~-----------~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~ 140 (255)
.......+...+.++.... +...++. ........+. . ..+.|...++ + .+ +.+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~--~--~~v~v~~~~g-----~-~~-~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVD--S--HTLLAKLKSG-----E-RT-ITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE--T--TEEEEECTTC-----C-EE-EEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEcc--C--CEEEEEeCCC-----e-EE-EEcCE
Confidence 1111123444444433332 2333444 3333443332 1 4455554432 1 57 99999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCc
Q 025254 141 LVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPA 220 (255)
Q Consensus 141 vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~ 220 (255)
||+||| +.|..|++||.+.+ .++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-- 219 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFS-LDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS-- 219 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTT-CSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhh-hhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--
Confidence 999999 78888988887543 133333332 3335789999999999999999999999999999984
Q ss_pred eeeccc
Q 025254 221 CLWRFE 226 (255)
Q Consensus 221 ~~~~~~ 226 (255)
.+++..
T Consensus 220 ~~l~~~ 225 (483)
T 3dgh_A 220 IVLRGF 225 (483)
T ss_dssp CSSTTS
T ss_pred CCCccc
Confidence 355543
No 61
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.80 E-value=3.7e-19 Score=154.28 Aligned_cols=190 Identities=16% Similarity=0.186 Sum_probs=119.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEE-ecc---cccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HLA---KQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
++||+|||||++|+++|..|++.|.+|+|||+. .+||.|... +.+.... ... ..+..+..+....... ..+..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENV-TIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSC-EECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-ccCHH
Confidence 479999999999999999999999999999998 677765321 1110000 000 0000000000000000 01111
Q ss_pred H-----------HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 82 Q-----------FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 82 ~-----------~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
. +.+.+.+.+++.++.+ +.+..+ .+ +. +.+.|...++ + .+ +.+|+||+||| +.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~-~i--d~--~~v~V~~~~G-----~-~~-i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVEI--VKGEAY-FV--DA--NTVRVVNGDS-----A-QT-YTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEE--EESEEE-EE--ET--TEEEEEETTE-----E-EE-EECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Ec--cC--CeEEEEeCCC-----c-EE-EEeCEEEEecC--CC
Confidence 1 2233445566666654 666543 23 22 5566765442 1 56 89999999999 67
Q ss_pred CCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 151 PFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 151 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
|..|+++|.+. .+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|.
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~-~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~ 208 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALN-LGEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSG 208 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred CCCCCCCCccc---------eEecHHHHhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccc
Confidence 77777766431 2444444332 22247899999999999999999999999999999998 67764
No 62
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.80 E-value=4.7e-19 Score=153.63 Aligned_cols=189 Identities=16% Similarity=0.186 Sum_probs=117.7
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEeccc----ccccCCCCCCCCCCCCCCCHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRAQ 82 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (255)
+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. .+.+...+.... .+.. ..+..+... ...+...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~~-~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVKG-VELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEECC-EEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccCC-CccCHHH
Confidence 79999999999999999999999999999999888886542 111100000000 0000 000000000 0011122
Q ss_pred HH-----------HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 83 FI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 83 ~~-----------~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
+. ..+...+++.++.+ +.+..+ .+ + ...+.|.. ++ .+ +.||+||+||| +.|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i---~-~~~~~v~~-~g-------~~-~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL---S-ERKVLVEE-TG-------EE-LEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES---S-SSEEEETT-TC-------CE-EEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee---c-CCeEEEee-CC-------EE-EEecEEEECCC--CCC
Confidence 22 22234455556654 555432 22 1 24444433 21 57 89999999999 677
Q ss_pred CCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
..|+++|.+. ..+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|..
T Consensus 142 ~~~~~~g~~~--------~~v~~~~~~~~-~~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~ 206 (455)
T 2yqu_A 142 LIPPWAQVDY--------ERVVTSTEALS-FPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTM 206 (455)
T ss_dssp CCCTTBCCCS--------SSEECHHHHTC-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CCCCCCCCCc--------CcEechHHhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-cccccc
Confidence 7777766432 13455554443 22346899999999999999999999999999999998 677643
No 63
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.79 E-value=2.8e-20 Score=159.26 Aligned_cols=171 Identities=17% Similarity=0.210 Sum_probs=116.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCC--eEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~--v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
++|+|||||++|+++|..|++.|++ |+|+|+.+..+.. .. .....+.... .. .... ...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~--~~-------~l~~~~~~g~-~~-~~~~--~~~------ 63 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD--RP-------SLSKAVLDGS-LE-RPPI--LAE------ 63 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC--SG-------GGGTHHHHTS-SS-SCCB--SSC------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC--Cc-------cccHHHhCCC-CC-HHHh--cCC------
Confidence 5999999999999999999999987 9999998865411 00 0000000000 00 0011 011
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
.++..+.++.+ +.+++|+.++... ..|.+.++ .. +.||+||+||| +.|..|++||.+.
T Consensus 64 --~~~~~~~~i~~--~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~ipG~~~---- 121 (410)
T 3ef6_A 64 --ADWYGEARIDM--LTGPEVTALDVQT----RTISLDDG-------TT-LSADAIVIATG--SRARTMALPGSQL---- 121 (410)
T ss_dssp --TTHHHHTTCEE--EESCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred --HHHHHHCCCEE--EeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEccC--CcccCCCCCCccc----
Confidence 12234456655 8888999997644 35666654 67 89999999999 6788888888642
Q ss_pred CCCCCcEEecccCCC-----CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
..+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++
T Consensus 122 ----~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~ 180 (410)
T 3ef6_A 122 ----PGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLV 180 (410)
T ss_dssp ----TTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSH
T ss_pred ----cceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccch
Confidence 23333322211 122357899999999999999999999999999999998 5554
No 64
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.79 E-value=1.2e-18 Score=152.07 Aligned_cols=196 Identities=15% Similarity=0.105 Sum_probs=118.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEE-ecc---cccccCCCCCCCCCCCCCCCH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRL-HLA---KQFCQLPHLPFPSSYPMFVSR 80 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~ 80 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. .+.+...+ ... ..+..+........ ....+.
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~-~~~~~~ 83 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP-EPELDI 83 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC-CCccCH
Confidence 3589999999999999999999999999999998888875431 11110000 000 00000001111100 011222
Q ss_pred HHHHH-----------HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEccc-------CCCCceeeEEEeeCEEE
Q 025254 81 AQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNL-------LSPGREIEEYYSGRFLV 142 (255)
Q Consensus 81 ~~~~~-----------~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~-------~~~~~~~~~~i~~d~vV 142 (255)
..+.. .+...+.+.++.+ +.++.+. + .+ +.+.|...++ .++ +..+ +++|+||
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~~--~~v~v~~~~g~~~~~~~~~g--~~~~-i~ad~lV 153 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF-L--DP--HHLEVSLTAGDAYEQAAPTG--EKKI-VAFKNCI 153 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE-E--ET--TEEEEEEEEEEETTEEEEEE--EEEE-EEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE-c--cC--CEEEEEecCCcccccccccC--cceE-EEcCEEE
Confidence 22222 2334455566654 6665433 2 22 4566654321 000 2257 8999999
Q ss_pred EeecCCCCCCCCC-CCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCce
Q 025254 143 VASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPAC 221 (255)
Q Consensus 143 iAtG~~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~ 221 (255)
+||| +.|..|+ ++ . ...+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +
T Consensus 154 iAtG--s~p~~~~~i~-~---------~~~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~ 219 (482)
T 1ojt_A 154 IAAG--SRVTKLPFIP-E---------DPRIIDSSGALA-LKEVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-G 219 (482)
T ss_dssp ECCC--EEECCCSSCC-C---------CTTEECHHHHTT-CCCCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-S
T ss_pred ECCC--CCCCCCCCCC-c---------cCcEEcHHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-c
Confidence 9999 5566655 33 1 223455444433 22347899999999999999999999999999999998 7
Q ss_pred eeccc
Q 025254 222 LWRFE 226 (255)
Q Consensus 222 ~~~~~ 226 (255)
++|..
T Consensus 220 ~l~~~ 224 (482)
T 1ojt_A 220 LMQGA 224 (482)
T ss_dssp SSTTS
T ss_pred ccccc
Confidence 77754
No 65
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.79 E-value=1.3e-19 Score=158.14 Aligned_cols=200 Identities=15% Similarity=0.141 Sum_probs=118.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC-CCCCeEE-ec---ccccc-cCCCCCCCCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRL-HL---AKQFC-QLPHLPFPSSYPMFVS 79 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~---~~~~~-~~~~~~~~~~~~~~~~ 79 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+.+||.|... +.+.... .. ...+. .+.....+.......+
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~ 83 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKIN 83 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccC
Confidence 35899999999999999999999999999999988888865321 0000000 00 00000 0000000000000112
Q ss_pred HHHHHH-----------HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCC-ceeeEEEeeCEEEEeecC
Q 025254 80 RAQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPG-REIEEYYSGRFLVVASGE 147 (255)
Q Consensus 80 ~~~~~~-----------~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~-~~~~~~i~~d~vViAtG~ 147 (255)
..++.. .+...+++.++.+ +.++.+.. . .+.+.|.+.++.... ..... ++||+||+|||+
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~~---~--~~~v~V~~~~G~~~~~~~~~~-i~~d~lViAtGs 155 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKVTY--YKGNGSFE---D--ETKIRVTPVDGLEGTVKEDHI-LDVKNIIVATGS 155 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEEEES---S--SSEEEEECCTTCTTCCSSCEE-EEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEEEc---c--CCeEEEEecCCCcccccccce-EEeCEEEECcCC
Confidence 222222 2334455566654 77765531 2 256666654431000 00135 789999999994
Q ss_pred CCCCCCCCCCCccccccCCCCCC-cEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 148 TTNPFTPDIRGLCSFCSSATGTG-EVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 148 ~s~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.| +.+||.+ + .+ .+++..+..... ..+++++|||+|.+|+|+|..+.+.|.+|+++++++ +++|..
T Consensus 156 --~p--~~~~g~~-~------~~~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 222 (478)
T 1v59_A 156 --EV--TPFPGIE-I------DEEKIVSSTGALSLK-EIPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASM 222 (478)
T ss_dssp --EE--CCCTTCC-C------CSSSEECHHHHTTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSS
T ss_pred --CC--CCCCCCC-C------CCceEEcHHHHHhhh-ccCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cccccc
Confidence 44 2344543 2 22 345554444322 247899999999999999999999999999999998 777743
No 66
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.79 E-value=1.2e-18 Score=151.23 Aligned_cols=185 Identities=16% Similarity=0.202 Sum_probs=116.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEecc----cccccCCC---CCCCCCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPH---LPFPSSYPMFV 78 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~~ 78 (255)
++||+|||||++|+.+|..|++.|.+|+|||+ ..+||.|.. .+.+....... ..+..+.. +..+.. ....
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 82 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPRL 82 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCcc
Confidence 58999999999999999999999999999999 568886642 11111000000 00001111 111111 1112
Q ss_pred CHHHHHHH-----------HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 79 SRAQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 79 ~~~~~~~~-----------l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+...+..+ +...+++.++.+ +.+..+. ++ + .+|.+.+ .. +.||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~~--~----~~v~v~~--------~~-~~~d~lviATG- 143 (458)
T 1lvl_A 83 DIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-LD--G----KQVEVDG--------QR-IQCEHLLLATG- 143 (458)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-EE--T----TEEEETT--------EE-EECSEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-cc--C----CEEEEee--------EE-EEeCEEEEeCC-
Confidence 33333322 234455666654 6654432 32 1 2355543 56 89999999999
Q ss_pred CCCCCCCC-CCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 148 TTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 148 ~s~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
+.|..|+ ++ + .+.+++..+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|.
T Consensus 144 -s~p~~~~~~~----~------~~~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~ 209 (458)
T 1lvl_A 144 -SSSVELPMLP----L------GGPVISSTEALAP-KALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPT 209 (458)
T ss_dssp -EEECCBTTBC----C------BTTEECHHHHTCC-SSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTT
T ss_pred -CCCCCCCCCC----c------cCcEecHHHHhhh-hccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccc
Confidence 6666554 33 2 2235555554432 2257899999999999999999999999999999998 67764
No 67
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.79 E-value=1.9e-19 Score=158.33 Aligned_cols=198 Identities=15% Similarity=0.146 Sum_probs=113.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC--------CCCc-ccccCCCCCeEEeccccccc-----CCCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYAS-IWKKYSYDRLRLHLAKQFCQ-----LPHLPFPS 72 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~--------~~g~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 72 (255)
.|||+|||+|++|+.+|..++++|.+|+|||+.. .+|| +.+..+.|.-.+......++ ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 4899999999999999999999999999999754 3565 22222111100000000000 00000000
Q ss_pred CCCCCCCHHHHHHHHHH-----------HHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 025254 73 SYPMFVSRAQFIEHLDH-----------YVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 73 ~~~~~~~~~~~~~~l~~-----------~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~v 141 (255)
. ..-.+...+.++.+. .++..++. .+.....-+. .....|...+... +..+ +++|++
T Consensus 122 ~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~---~i~G~a~f~~----~~~v~V~~~~~~~---~~~~-i~a~~i 189 (542)
T 4b1b_A 122 D-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK---YINGLAKLKD----KNTVSYYLKGDLS---KEET-VTGKYI 189 (542)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECEEEEEEE----TTEEEEEEC--CC---CEEE-EEEEEE
T ss_pred C-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEeeeEEEcC----CCcceEeecccCC---ceEE-EeeeeE
Confidence 0 000122233322222 23344544 2332322222 1344444433211 2277 999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCce
Q 025254 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPAC 221 (255)
Q Consensus 142 ViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~ 221 (255)
|+||| ++|..|+..+... ...+.+.+... ....+++++|||+|++|+|+|..+.++|.+||++.|+ .
T Consensus 190 iIATG--s~P~~P~~~~~~~--------~~~~ts~~~l~-l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~ 256 (542)
T 4b1b_A 190 LIATG--CRPHIPDDVEGAK--------ELSITSDDIFS-LKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--I 256 (542)
T ss_dssp EECCC--EEECCCSSSBTHH--------HHCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--C
T ss_pred EeccC--CCCCCCCcccCCC--------ccccCchhhhc-cccCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--c
Confidence 99999 8888875433221 12334444433 4456899999999999999999999999999999875 4
Q ss_pred eecccccc
Q 025254 222 LWRFEQVW 229 (255)
Q Consensus 222 ~~~~~~~~ 229 (255)
+||..+..
T Consensus 257 ~L~~~D~e 264 (542)
T 4b1b_A 257 VLRGFDQQ 264 (542)
T ss_dssp SSTTSCHH
T ss_pred cccccchh
Confidence 67776543
No 68
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.79 E-value=3.6e-19 Score=154.67 Aligned_cols=188 Identities=16% Similarity=0.146 Sum_probs=116.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEE----ecccccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRL----HLAKQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+++|..|++.|.+|+|||+ ..+||.|.. .+.+.... .....+..+..+.+....+ ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 58999999999999999999999999999999 568875532 11110000 0000000011111000000 01111
Q ss_pred -----------HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 82 -----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 82 -----------~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.+..++...+...++.. ..+ ++..+ +...+.+.. ++ .. +.+|++|+||| +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i------~~~~v~~~~--~~----~~-~~~d~lviAtG--~~ 144 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELA------GPNTVKLLA--SG----KT-VTAERIVIAVG--GH 144 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEES------SSSEEEETT--TT----EE-EEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEe------eCCEEEEec--CC----eE-EEeCEEEEecC--CC
Confidence 22233444455556553 443 44333 123455521 11 67 99999999999 77
Q ss_pred CC-CCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 151 PF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 151 ~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
|. +|+++|.+.. +...++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++|..
T Consensus 145 p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~ 209 (463)
T 4dna_A 145 PSPHDALPGHELC----------ITSNEAFD-LPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRF 209 (463)
T ss_dssp ECCCTTSTTGGGC----------BCHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred cccCCCCCCcccc----------ccHHHHhh-hhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-cccccc
Confidence 88 8888886532 23333332 23357899999999999999999999999999999998 666543
No 69
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.79 E-value=5.8e-20 Score=160.71 Aligned_cols=191 Identities=15% Similarity=0.209 Sum_probs=114.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccc-cCCCCCeEEecc----cccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK-KYSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.. +||.+. ..+.+...+... .....++.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999976 777432 111111000000 00001111111100 0113334
Q ss_pred HHHHHHHHHHHhcC---------C-CCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 82 QFIEHLDHYVSHFN---------I-GPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 82 ~~~~~l~~~~~~~~---------l-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
++.+++.+...+.. + ... .+.....-. +.++|.+.++ .. +.+|+||+||| +.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~g~a~~~------~~~~v~~~~~-------~~-~~~d~lViATG--s~p 148 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQD-KIRGFAKFL------DEHTLQVDDH-------SQ-VIAKRIVIATG--SRP 148 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGG-EEESCEEEE------ETTEEEETTT-------EE-EEEEEEEECCC--EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCee-EEEEEEEEe------cCCEEEEcCC-------cE-EEeCEEEEccC--CCC
Confidence 44444443333221 0 010 111111111 2234666443 77 99999999999 777
Q ss_pred CCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 152 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
..|++++.. ...+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ +++|..
T Consensus 149 ~~p~~~~~~--------~~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~ 213 (492)
T 3ic9_A 149 NYPEFLAAA--------GSRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQ 213 (492)
T ss_dssp CCCHHHHTT--------GGGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCC
T ss_pred cCCCCCCcc--------CCcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccC
Confidence 777644321 123455444443 33458999999999999999999999999999999998 676653
No 70
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.78 E-value=2.2e-19 Score=157.33 Aligned_cols=196 Identities=14% Similarity=0.147 Sum_probs=122.1
Q ss_pred CeEEEECCCHHHHHHHHHHhhC---CCCeEEEeccCCCCccccc-CCCCCeEEecc----cccccCCCCCCCC-CCCCCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPS-SYPMFV 78 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~---g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~ 78 (255)
+||+|||||++|+++|..|++. |.+|+|||+.. +||.|.. .+.+....... ..+..+....++. ......
T Consensus 3 ~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~ 81 (499)
T 1xdi_A 3 TRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAKI 81 (499)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------CB
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCcc
Confidence 7999999999999999999999 99999999998 8876432 11110000000 0000111111110 000012
Q ss_pred CHHHH-----------HHHHHHHHHhcCCCCeeEeccEEEEEEEcC--CCCcEEEEEcccCCCCceeeEEEeeCEEEEee
Q 025254 79 SRAQF-----------IEHLDHYVSHFNIGPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGREIEEYYSGRFLVVAS 145 (255)
Q Consensus 79 ~~~~~-----------~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~--~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAt 145 (255)
+...+ ...+.+.+++.++.+ +.+ .++.++..+ ..+.+.|...++ ++.. +.+|+||+||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~~~~~~~~~~~~V~~~~g-----~~~~-~~~d~lviAT 152 (499)
T 1xdi_A 82 SLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAG-RGELIDSTPGLARHRIKATAADG-----STSE-HEADVVLVAT 152 (499)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-EEEECCSSSCCSSEEEEEECTTS-----CEEE-EEESEEEECC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEecCcccCCCCEEEEEeCCC-----cEEE-EEeCEEEEcC
Confidence 22222 233455566667664 665 355554310 013445544432 1137 8999999999
Q ss_pred cCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 146 GETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 146 G~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
| +.|..|+++|.+.. .++...+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|.
T Consensus 153 G--s~p~~p~i~g~~~~--------~v~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 220 (499)
T 1xdi_A 153 G--ASPRILPSAQPDGE--------RILTWRQLYD-LDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPY 220 (499)
T ss_dssp C--EEECCCGGGCCCSS--------SEEEGGGGGG-CSSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCC
T ss_pred C--CCCCCCCCCCCCcC--------cEEehhHhhh-hhccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccc
Confidence 9 77777877776432 3555555443 22356899999999999999999999999999999998 77764
No 71
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.78 E-value=2.4e-19 Score=155.78 Aligned_cols=191 Identities=16% Similarity=0.145 Sum_probs=119.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEecc----cccc-cCCCCCCCCCCCCCCCH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (255)
++||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. .+.+....... ..+. .+....... ....+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~--~~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISG--EVTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEE--CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCC--CCccCH
Confidence 479999999999999999999999999999998 57765431 11110000000 0000 001111100 000111
Q ss_pred H-----------HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 81 A-----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 81 ~-----------~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
. .+.+.+.+.+.+.++.+ +.++.+. .+ .+.+.|...++ +..+ +.+|+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~---id--~~~v~V~~~~G-----~~~~-~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF---AD--ANTLLVDLNDG-----GTES-VTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE---SS--SSEEEEEETTS-----CCEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE---ec--CCeEEEEeCCC-----ceEE-EEcCEEEECCC--C
Confidence 1 12233445556666654 6655432 22 25666665442 1257 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 150 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.|..|+++|.+. .+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ +++|..
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~ 210 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQIL-SRELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNE 210 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred CCCCCCCCCCCc---------eEEecHHHhh-ccccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-cccccc
Confidence 677777766432 2444444332 22247899999999999999999999999999999998 777743
No 72
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.78 E-value=4.2e-19 Score=152.81 Aligned_cols=176 Identities=15% Similarity=0.139 Sum_probs=116.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
.+||+|||||++|+.+|..|++.|. +|+|+|+.+..+.. .. .....+... ... ...+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~-------~~--~l~~~~~~~-----~~~------~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH-------LP--PLSKAYLAG-----KAT------AESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC-------SG--GGGTTTTTT-----CSC------SGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc-------CC--CCcHHHhCC-----CCC------hHHhc
Confidence 4899999999999999999999998 79999998754310 00 000000000 000 00110
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
....+.+++.++.+ +.+++|+.++..+ . .|.+.++ .+ +.||+||+||| +.|..|+++|.+..
T Consensus 64 ~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~--~v~~~~g-------~~-~~~d~lviAtG--~~p~~~~i~G~~~~-- 125 (431)
T 1q1r_A 64 LRTPDAYAAQNIQL--LGGTQVTAINRDR--Q--QVILSDG-------RA-LDYDRLVLATG--GRPRPLPVASGAVG-- 125 (431)
T ss_dssp SSCHHHHHHTTEEE--ECSCCEEEEETTT--T--EEEETTS-------CE-EECSEEEECCC--EEECCCGGGTTHHH--
T ss_pred ccCHHHHHhCCCEE--EeCCEEEEEECCC--C--EEEECCC-------CE-EECCEEEEcCC--CCccCCCCCCcccC--
Confidence 01123344566654 8888999998644 2 4666543 57 89999999999 67888888876421
Q ss_pred CCCCC-CcEEecccCCC-----CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 165 SATGT-GEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 165 ~~~~~-~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
. ..++......+ .....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++.
T Consensus 126 ----~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~ 187 (431)
T 1q1r_A 126 ----KANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLER 187 (431)
T ss_dssp ----HSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTT
T ss_pred ----CCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccc
Confidence 1 01333222111 112347899999999999999999999999999999988 66654
No 73
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.78 E-value=1.3e-19 Score=158.10 Aligned_cols=178 Identities=16% Similarity=0.305 Sum_probs=116.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
++||+|||||++|+++|..|++. |.+|+|||+.+..+..... . +. + ... . ..+..++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~--~-------~~-~--~~~-~-------~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG--L-------PY-V--ISG-A-------IASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG--H-------HH-H--HTT-S-------SSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC--c-------ch-h--hcC-C-------cCCHHHhh
Confidence 46999999999999999999986 8899999998765421110 0 00 0 000 0 00011111
Q ss_pred H-HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 85 E-HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 85 ~-~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
. +...+.+..++.+ +.+++|+.++..+ +.+.+.... ++ +..+ +.||+||+||| +.|..|+++|.+.
T Consensus 96 ~~~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~v~v~~~~--~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~-- 162 (480)
T 3cgb_A 96 ARNVKTFRDKYGIDA--KVRHEVTKVDTEK--KIVYAEHTK--TK--DVFE-FSYDRLLIATG--VRPVMPEWEGRDL-- 162 (480)
T ss_dssp SSCHHHHHHTTCCEE--ESSEEEEEEETTT--TEEEEEETT--TC--CEEE-EECSEEEECCC--EEECCCCCBTTTS--
T ss_pred hcCHHHHHhhcCCEE--EeCCEEEEEECCC--CEEEEEEcC--CC--ceEE-EEcCEEEECCC--CcccCCCCCCccC--
Confidence 1 1222234456654 8888999998755 555554311 11 2247 99999999999 7788888887642
Q ss_pred cCCCCCCcEEecccCCCC-------CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeec
Q 025254 164 SSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWR 224 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~-------~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~ 224 (255)
..+++.....+. ....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ .+++
T Consensus 163 ------~~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~ 223 (480)
T 3cgb_A 163 ------QGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGT 223 (480)
T ss_dssp ------BTEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTS
T ss_pred ------CCEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhh
Confidence 124443222110 01257899999999999999999999999999999988 6665
No 74
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.78 E-value=7.4e-19 Score=153.49 Aligned_cols=187 Identities=16% Similarity=0.165 Sum_probs=114.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc-CCCCCeEEe----cccccccCCCCCCCCCCCCCCCHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLH----LAKQFCQLPHLPFPSSYPMFVSRA 81 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 81 (255)
.+||+|||||++|+++|..|++.|.+|+|||+ ..+||.|.. .+.+..... ....+.....+.+....+ ..+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 58999999999999999999999999999999 567875432 111110000 000000111111110000 11111
Q ss_pred -----------HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEc-ccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 82 -----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 82 -----------~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+..++...+...++.. ..+ .+..++. . .+.+. ++ .. +.+|++|+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~~----~--~v~v~~~~-------~~-~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI--YES-RAVFVDE----H--TLELSVTG-------ER-ISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEET----T--EEEETTTC-------CE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEeeC----C--EEEEecCC-------eE-EEeCEEEEccC--C
Confidence 22333444455556553 443 4555432 2 35553 22 67 89999999999 6
Q ss_pred CCC-CCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeeccc
Q 025254 150 NPF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRFE 226 (255)
Q Consensus 150 ~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~ 226 (255)
.|. .|.++|.+.. ....++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~ 230 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFD-LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNF 230 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGG-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred CcccCCCCCCcccc----------ccHHHHHh-HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-cccccc
Confidence 777 7888776532 22333222 23357899999999999999999999999999999998 666543
No 75
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.78 E-value=2.7e-19 Score=155.00 Aligned_cols=161 Identities=16% Similarity=0.148 Sum_probs=114.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
.++||+|||||++|+.+|..|++.+ .+|+|||+.+.++|.|..... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4689999999999999999999988 899999999888877754321 112223456
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
..++.+.+++.++.+ +.+..|. .. |++.+ .. +.||+||+|||+. .+..|++||.+ .
T Consensus 62 ~~~~~~~~~~~gv~~--~~~~~v~--------~~--V~~~~--------~~-~~~d~lVlAtGs~-~~~~~~ipG~~-~- 117 (460)
T 1cjc_A 62 INTFTQTARSDRCAF--YGNVEVG--------RD--VTVQE--------LQ-DAYHAVVLSYGAE-DHQALDIPGEE-L- 117 (460)
T ss_dssp HHHHHHHHTSTTEEE--EBSCCBT--------TT--BCHHH--------HH-HHSSEEEECCCCC-EECCCCCTTTT-S-
T ss_pred HHHHHHHHHhCCcEE--EeeeEEe--------eE--EEecc--------ce-EEcCEEEEecCcC-CCCCCCCCCCC-C-
Confidence 677777777777654 6665441 11 33322 35 7899999999943 23667788864 2
Q ss_pred cCCCCCCcEEecccC----------CCC-CCCCCCeEEEEcCCcCHHHHHHHHh--------------------hhcC-e
Q 025254 164 SSATGTGEVIHSTQY----------KNG-KPYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA-K 211 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~----------~~~-~~~~~~~v~ViG~g~~~~e~a~~l~--------------------~~g~-~ 211 (255)
. .+++..++ ... ....+++++|||+|.+|+|+|..|. +.+. +
T Consensus 118 -----~-gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~ 191 (460)
T 1cjc_A 118 -----P-GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKT 191 (460)
T ss_dssp -----T-TEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCE
T ss_pred -----C-cEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcE
Confidence 2 24444333 111 1235789999999999999999998 5676 7
Q ss_pred EEEEEecC
Q 025254 212 TSLVVRSP 219 (255)
Q Consensus 212 v~~~~r~~ 219 (255)
|+++.|++
T Consensus 192 V~lv~r~~ 199 (460)
T 1cjc_A 192 VWIVGRRG 199 (460)
T ss_dssp EEEECSSC
T ss_pred EEEEEcCC
Confidence 99999988
No 76
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.78 E-value=2e-19 Score=155.66 Aligned_cols=160 Identities=17% Similarity=0.167 Sum_probs=113.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-C------CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-~------g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (255)
++||+|||||++|+.+|..|++ . +.+|+|||+.+.++|.|++... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 5799999999999999999999 7 8999999999888887754321 22233
Q ss_pred HHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCc
Q 025254 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGL 159 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~ 159 (255)
..++..++.+.+.+.++.+ +.+..+ + .. |++.+ .. +.||+||+|||+. .+..+++||.
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v------~--~~--v~~~~--------~~-~~~d~lViAtG~~-~~~~~~ipG~ 117 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV------G--EH--VQPGE--------LS-ERYDAVIYAVGAQ-SDRMLNIPGE 117 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB------T--TT--BCHHH--------HH-HHSSEEEECCCCC-EECCCCCTTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE------C--CE--EEECC--------Ce-EeCCEEEEeeCCC-CCCCCCCCCC
Confidence 4466777777777766544 555332 1 11 33333 35 7899999999952 2566778886
Q ss_pred cccccCCCCCCcEEecccC-----------CCCCCCCCCeEEEEcCCcCHHHHHHHHhhh--------------------
Q 025254 160 CSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH-------------------- 208 (255)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~-------------------- 208 (255)
+ + .+ +++..++ .......+++++|||+|.+|+|+|..|.+.
T Consensus 118 ~-~------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~ 189 (456)
T 1lqt_A 118 D-L------PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPR 189 (456)
T ss_dssp T-S------TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTC
T ss_pred C-C------CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHC
Confidence 5 3 33 4544332 121223678999999999999999999874
Q ss_pred c-CeEEEEEecC
Q 025254 209 A-AKTSLVVRSP 219 (255)
Q Consensus 209 g-~~v~~~~r~~ 219 (255)
| .+|+++.|++
T Consensus 190 g~~~V~lv~r~~ 201 (456)
T 1lqt_A 190 GIQEVVIVGRRG 201 (456)
T ss_dssp CCCEEEEECSSC
T ss_pred CCcEEEEEecCC
Confidence 5 4899999987
No 77
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.78 E-value=6.6e-18 Score=147.21 Aligned_cols=194 Identities=13% Similarity=0.116 Sum_probs=116.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC------CCccccc-CCCCCeEE-eccccccc----CCCCCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC------YASIWKK-YSYDRLRL-HLAKQFCQ----LPHLPFPSSY 74 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~------~g~~~~~-~~~~~~~~-~~~~~~~~----~~~~~~~~~~ 74 (255)
++||+|||||++|+++|..|++.|.+|+|||+.+. +||.|.. .+.+...+ .....+.. +..+.+...
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~- 81 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG- 81 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS-
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC-
Confidence 58999999999999999999999999999999874 4443321 11110000 00000000 011110000
Q ss_pred CCCCCHHHHH-----------HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEE
Q 025254 75 PMFVSRAQFI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVV 143 (255)
Q Consensus 75 ~~~~~~~~~~-----------~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vVi 143 (255)
....+...+. ..+....+..++.+ ..+ .+..+ . ...+.|...++ +... +.+|+||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~~--~--~~~~~v~~~~g-----~~~~-~~~d~lvl 148 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEG-HGKLL--A--GKKVEVTAADG-----SSQV-LDTENVIL 148 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-EEEEC--S--TTCEEEECTTS-----CEEE-ECCSCEEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEe--c--CCEEEEEcCCC-----ceEE-EEcCEEEE
Confidence 0111212222 22223344556553 444 33332 2 25566655442 2257 89999999
Q ss_pred eecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 144 ASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 144 AtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
||| +.|..|+.++.+ ...+++..+... ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ +++
T Consensus 149 AtG--~~p~~~~~~~~~--------~~~v~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l 216 (476)
T 3lad_A 149 ASG--SKPVEIPPAPVD--------QDVIVDSTGALD-FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFL 216 (476)
T ss_dssp CCC--EEECCCTTSCCC--------SSSEEEHHHHTS-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSS
T ss_pred cCC--CCCCCCCCCCCC--------cccEEechhhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcC
Confidence 999 666655443322 224555554443 33457899999999999999999999999999999998 777
Q ss_pred ccc
Q 025254 224 RFE 226 (255)
Q Consensus 224 ~~~ 226 (255)
|..
T Consensus 217 ~~~ 219 (476)
T 3lad_A 217 PAV 219 (476)
T ss_dssp TTS
T ss_pred ccc
Confidence 643
No 78
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.78 E-value=1.5e-19 Score=154.44 Aligned_cols=173 Identities=17% Similarity=0.211 Sum_probs=115.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
++||+|||||++|+++|..|++.|+ +|+|||+.+..+.. .. .....+..... .... +.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~~-------~l~~~~l~~~~--~~~~---------~~ 60 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ--RP-------PLSKAYLKSGG--DPNS---------LM 60 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC--SG-------GGGTGGGGSCC--CTTS---------SB
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC--Cc-------cCCHHHHCCCC--CHHH---------cc
Confidence 3689999999999999999999998 89999998854311 00 00000100000 0000 00
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
....++..+.++.. +. ++|++++... . .|.+.++ .. +.||+||+||| +.|..|++||.+.
T Consensus 61 ~~~~~~~~~~~i~~--~~-~~v~~id~~~--~--~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~i~g~~~--- 120 (404)
T 3fg2_P 61 FRPEKFFQDQAIEL--IS-DRMVSIDREG--R--KLLLASG-------TA-IEYGHLVLATG--ARNRMLDVPNASL--- 120 (404)
T ss_dssp SSCHHHHHHTTEEE--EC-CCEEEEETTT--T--EEEESSS-------CE-EECSEEEECCC--EEECCCCSTTTTS---
T ss_pred CCCHHHHHhCCCEE--EE-EEEEEEECCC--C--EEEECCC-------CE-EECCEEEEeeC--CCccCCCCCCCCC---
Confidence 11123344556554 66 8899987654 3 4666554 67 89999999999 6788888887542
Q ss_pred CCCCCCcEEecccCCC-----CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 165 SATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
..++......+ .....+++++|||+|.+|+|+|..+.+.|.+|+++++.+ ++++.
T Consensus 121 -----~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~ 180 (404)
T 3fg2_P 121 -----PDVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMAR 180 (404)
T ss_dssp -----TTEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTT
T ss_pred -----CcEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhh
Confidence 12333222111 112247899999999999999999999999999999998 56553
No 79
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.78 E-value=4.8e-20 Score=167.31 Aligned_cols=165 Identities=20% Similarity=0.222 Sum_probs=120.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.+.... ..+.+....++.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHH
Confidence 468999999999999999999999999999999998888654210 1122233457778
Q ss_pred HHHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC------CCCCCCCC
Q 025254 86 HLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRG 158 (255)
Q Consensus 86 ~l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~------~~~~~~~g 158 (255)
++...+.+. ++.+ +.++++ ...+. .. +.+|+||+|||+... |..|.++|
T Consensus 448 ~~~~~~~~~~gv~~--~~~~~v--------------~~~~~-------~~-~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVEI--YRESPM--------------TGDDI-------VE-FGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEEE--ESSCCC--------------CHHHH-------HH-TTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCEE--EECCee--------------cHHHH-------hh-cCCCEEEEcCCCccccccccccCCCCCCC
Confidence 888877776 5543 555332 11121 45 789999999995422 55677777
Q ss_pred ccccccCCCCCCcEEecccCCCCCCCCCCeEEEEc--CCcCHHHHHHHHhhhcCeEEEEEecCceeecc
Q 025254 159 LCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSPACLWRF 225 (255)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~ 225 (255)
.+ ...+++..++.......+++++||| +|.+|+|+|..+.+.|.+|+++++.+ .+++.
T Consensus 504 ~~--------~~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~ 563 (690)
T 3k30_A 504 AE--------GMQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSW 563 (690)
T ss_dssp CT--------TSEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGG
T ss_pred CC--------CCcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-ccccc
Confidence 54 2345666555554455678899999 99999999999999999999999988 55554
No 80
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.77 E-value=4.1e-18 Score=148.95 Aligned_cols=193 Identities=13% Similarity=0.128 Sum_probs=116.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-CCCCeEEEe--------ccCCCCccccc-CCCCCeEEecccc----cccCCCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKK-YSYDRLRLHLAKQ----FCQLPHLPFPS 72 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie--------~~~~~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~ 72 (255)
.+||+|||||++|+++|..|++ .|.+|+||| +...+||.|.. .+.+...+..... +.....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999 999999999 34567775432 1111100000000 00001111100
Q ss_pred CCC-CCCCHHHHHH-----------HHHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEE---cccCCCCce-eeEE
Q 025254 73 SYP-MFVSRAQFIE-----------HLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGRE-IEEY 135 (255)
Q Consensus 73 ~~~-~~~~~~~~~~-----------~l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~---~~~~~~~~~-~~~~ 135 (255)
... ...+...+.+ .+...+++. ++.+ +.+ .++.++ . ..+.+.. .++ + ...
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~--~~g-~~~~i~--~--~~v~v~~~~~~~g-----~~~~~- 149 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTF--HQG-FGALQD--N--HTVLVRESADPNS-----AVLET- 149 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEE--EES-EEEEEE--T--TEEEEESSSSTTS-----CEEEE-
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE--EEe-EEEEee--C--CEEEEEeeccCCC-----CceEE-
Confidence 000 0112223322 223334444 5543 555 455553 2 3333332 121 1 156
Q ss_pred EeeCEEEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhh---cCeE
Q 025254 136 YSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKT 212 (255)
Q Consensus 136 i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~---g~~v 212 (255)
+.+|+||+||| +.|..|+++|.+.. ++..++.. ....+++++|||+|.+|+|+|..+.+. |.+|
T Consensus 150 ~~~d~lviAtG--s~p~~p~i~g~~~~----------~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~V 216 (490)
T 1fec_A 150 LDTEYILLATG--SWPQHLGIEGDDLC----------ITSNEAFY-LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQV 216 (490)
T ss_dssp EEEEEEEECCC--EEECCCCSBTGGGC----------BCHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEE
T ss_pred EEcCEEEEeCC--CCCCCCCCCCccce----------ecHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeE
Confidence 89999999999 77888888876322 23333322 223478999999999999999999999 9999
Q ss_pred EEEEecCceeeccc
Q 025254 213 SLVVRSPACLWRFE 226 (255)
Q Consensus 213 ~~~~r~~~~~~~~~ 226 (255)
+++++.+ +++|..
T Consensus 217 tlv~~~~-~~l~~~ 229 (490)
T 1fec_A 217 DLAYRGD-MILRGF 229 (490)
T ss_dssp EEEESSS-SSSTTS
T ss_pred EEEEcCC-Cccccc
Confidence 9999998 777653
No 81
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.77 E-value=4.8e-19 Score=161.55 Aligned_cols=168 Identities=17% Similarity=0.182 Sum_probs=113.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++||+|||||++|+++|..|++.|++|+|||+.+.+||.|..... .+.......+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~----------------------~pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAA----------------------LPGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTT----------------------STTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeeccc----------------------CCChHHHHHHHH
Confidence 3589999999999999999999999999999999988887653210 011112234455
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC------CCCCCCCCc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRGL 159 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~------~~~~~~~g~ 159 (255)
++...++... ..+..++.+... . .++..+. .. +.+|+||+|||+... |..|++||.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~~---~--~v~~~~~-------~~-~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALGQ---K--PMTADDV-------LQ-YGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECSC---C--CCCHHHH-------HT-SCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEeC---e--EEehhhc-------cc-cCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 5555444330 000011122111 1 1233222 45 789999999995322 566778887
Q ss_pred cccccCCCCCCcEEecccCCCCCCCCCCeEEEEc--CCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG--~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
+.+ ...+++..++.......+++++||| +|.+|+|+|..|.+.|.+|+++++.+
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 654 4456666555444444678999999 89999999999999999999999987
No 82
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.76 E-value=9.1e-18 Score=150.21 Aligned_cols=193 Identities=19% Similarity=0.240 Sum_probs=113.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEecc-C-------CCCcccc-cCCCCCeEEeccc----ccccCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-N-------CYASIWK-KYSYDRLRLHLAK----QFCQLPHLPFPS 72 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~-~-------~~g~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~ 72 (255)
..+||+|||||++|+++|..|++.|.+|+|||+. + .+||.|. ..+.+...+.... .+.....+.+..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 4689999999999999999999999999999973 2 2555432 1111110000000 000000001000
Q ss_pred CC-CCCCCHHHHHHHHHHHHH-----------hcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCE
Q 025254 73 SY-PMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (255)
Q Consensus 73 ~~-~~~~~~~~~~~~l~~~~~-----------~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~ 140 (255)
.. ....+..++.+++...+. ..++. ........+.. ....+...++ ++.+ +.||+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~~----~~v~v~~~~g-----~~~~-~~~d~ 252 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLISP----HEVQITDKNQ-----KVST-ITGNK 252 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC-----CEEE-EEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcCC----CEEEEEeCCC-----CeEE-EEeCE
Confidence 00 012334455555544332 23333 22223333321 2333333221 2257 89999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCc
Q 025254 141 LVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPA 220 (255)
Q Consensus 141 vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~ 220 (255)
||+||| +.|..|++||...+ .++..+... ....+++++|||+|.+|+|+|..+.+.|.+|++++|+
T Consensus 253 lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-- 318 (598)
T 2x8g_A 253 IILATG--ERPKYPEIPGAVEY---------GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS-- 318 (598)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--
T ss_pred EEEeCC--CCCCCCCCCCcccc---------eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--
Confidence 999999 77888888886543 233333322 2234678999999999999999999999999999987
Q ss_pred eeecc
Q 025254 221 CLWRF 225 (255)
Q Consensus 221 ~~~~~ 225 (255)
.++|.
T Consensus 319 ~~l~~ 323 (598)
T 2x8g_A 319 ILLRG 323 (598)
T ss_dssp CSSTT
T ss_pred cCcCc
Confidence 34543
No 83
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.75 E-value=7.6e-19 Score=159.05 Aligned_cols=149 Identities=19% Similarity=0.260 Sum_probs=108.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++||+|||||++|+.+|..|++.|++|+|||+.+.+||.|.... ..+......++.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~----------------------~~~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK----------------------QIPGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT----------------------TSTTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc----------------------cCCCHHHHHHHHH
Confidence 358999999999999999999999999999999988888654210 0011122235556
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEE-eeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY-SGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i-~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
++.+.+++.++.+ +.++.|+. .. + .+|+||+||| +.|..|+++|.+.
T Consensus 430 ~~~~~~~~~gv~~--~~~~~v~~------------------------~~-~~~~d~lviAtG--~~p~~~~i~G~~~--- 477 (671)
T 1ps9_A 430 YYRRMIEVTGVTL--KLNHTVTA------------------------DQ-LQAFDETILASG--IVPRTPPIDGIDH--- 477 (671)
T ss_dssp HHHHHHHHHTCEE--EESCCCCS------------------------SS-SCCSSEEEECCC--EEECCCCCBTTTS---
T ss_pred HHHHHHHHcCCEE--EeCcEecH------------------------HH-hhcCCEEEEccC--CCcCCCCCCCCCC---
Confidence 6667777777665 66643310 22 5 7899999999 6788888888653
Q ss_pred CCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEE
Q 025254 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTS 213 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~ 213 (255)
..+++..+........+++++|||+|.+|+|+|..|.+.|.+|+
T Consensus 478 -----~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vt 521 (671)
T 1ps9_A 478 -----PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTS 521 (671)
T ss_dssp -----TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGG
T ss_pred -----CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcc
Confidence 24555555444344568999999999999999999998875544
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.74 E-value=1e-17 Score=156.80 Aligned_cols=180 Identities=14% Similarity=0.151 Sum_probs=119.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.+.. . +.... .. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~i------------------~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQI------------------DG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCEE------------------TT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Ccccc------------------CC-CCHHHHHHH
Confidence 479999999999999999999999999999999888887652 1 10000 00 112344455
Q ss_pred HHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcc-c---CC----CCceeeEEEeeCEEEEeecCCCCCCCCCCC
Q 025254 87 LDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASN-L---LS----PGREIEEYYSGRFLVVASGETTNPFTPDIR 157 (255)
Q Consensus 87 l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~-~---~~----~~~~~~~~i~~d~vViAtG~~s~~~~~~~~ 157 (255)
+.+.+... ++.+ +.+++|.++.... ....+.... . .. ...+... +.||+||+||| +.|..|++|
T Consensus 187 ~~~~l~~~~~v~~--~~~~~V~~i~~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~-i~~d~lVlATG--s~p~~~~ip 259 (965)
T 2gag_A 187 VTSELAEAEETTH--LQRTTVFGSYDAN--YLIAAQRRTVHLDGPSGPGVSRERIWH-IRAKQVVLATG--AHERPIVFE 259 (965)
T ss_dssp HHHHHHHSTTEEE--ESSEEEEEEETTT--EEEEEEECSTTCSSCCCTTCCSEEEEE-EEEEEEEECCC--EEECCCCCB
T ss_pred HHHHHhhcCCcEE--EeCCEEEeeecCC--ceeeeEeecccccccccccCCCCceEE-EECCEEEECCC--CccCCCCCC
Confidence 44545554 5544 8888888876432 111111000 0 00 0002247 89999999999 667777788
Q ss_pred CccccccCCCCCCcEEecccC---CC-CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 158 GLCSFCSSATGTGEVIHSTQY---KN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 158 g~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
|.+. . .+++.... .. .....+++++|||+|.+|+|+|..|.+.|.+|+++++++ .++
T Consensus 260 G~~~-------~-gv~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~ 320 (965)
T 2gag_A 260 NNDR-------P-GIMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SIS 320 (965)
T ss_dssp TCCS-------T-TEEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCC
T ss_pred CCCC-------C-CEEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccc
Confidence 7653 2 24443221 11 122346899999999999999999999999999999987 444
No 85
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.72 E-value=4.7e-18 Score=160.03 Aligned_cols=167 Identities=19% Similarity=0.269 Sum_probs=112.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+||+|||||++|+++|..|++.|+ +|+|||+.+.+||.+.+.. +. +....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~i---------------p~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEI---------------PQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTS---------------CT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccC---------------Cc---------ccCCHHHHH
Confidence 5799999999999999999999999 7999999988888754221 11 111134566
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCC-CCcccccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-RGLCSFCS 164 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~-~g~~~~~~ 164 (255)
+..+++++.++.+ +.+..+.. .. +++.+. .. +.||+||+|||+. .|..+++ +|.+..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~-------~~--v~~~~~-------~~-~~~d~vvlAtGa~-~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE-------NE--ITLNTL-------KE-EGYKAAFIGIGLP-EPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST-------TS--BCHHHH-------HH-TTCCEEEECCCCC-EECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc-------ce--EEhhhc-------Cc-cCCCEEEEecCCC-CCCCCCCCCCCCCC--
Confidence 6667777777665 77655511 11 333332 45 7899999999952 3544433 344321
Q ss_pred CCCCCCcEEecccCC--------------C-CCCCCCCeEEEEcCCcCHHHHHHHHhhhcC-eEEEEEecCceeec
Q 025254 165 SATGTGEVIHSTQYK--------------N-GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSPACLWR 224 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~--------------~-~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~-~v~~~~r~~~~~~~ 224 (255)
. .++...++. . .....+++++|||+|.+|+|+|..+.++|. +|+++.|++..++|
T Consensus 301 ----~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~ 371 (1025)
T 1gte_A 301 ----Q-GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIR 371 (1025)
T ss_dssp ----T-TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCC
T ss_pred ----C-CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCC
Confidence 1 234332221 1 112236799999999999999999999996 89999998744444
No 86
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.71 E-value=6.6e-18 Score=147.81 Aligned_cols=183 Identities=19% Similarity=0.243 Sum_probs=111.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++|||||||++|+.+|..|.+.+++|+|||+++.. .|.. .+++... ...+...+..-
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~~~P------------lL~~va~--------G~l~~~~i~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--LFTP------------LLPSAPV--------GTVDEKSIIEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--ECGG------------GGGGTTT--------TSSCGGGGEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--cccc------------chhHHhh--------ccccHHHhhhh
Confidence 568999999999999999999999999999998632 1110 0111111 01111111111
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEccc-----------CCCCceeeEEEeeCEEEEeecCCCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNL-----------LSPGREIEEYYSGRFLVVASGETTNPFTPD 155 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~-----------~~~~~~~~~~i~~d~vViAtG~~s~~~~~~ 155 (255)
+........-.+. +...+|++|+... ...++..... .....+..+ +.||+||+||| +.|..++
T Consensus 100 ~~~~~~~~~~~v~-~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~-i~YD~LViAtG--s~~~~~~ 173 (502)
T 4g6h_A 100 IVNFALKKKGNVT-YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQAEPAE-IKYDYLISAVG--AEPNTFG 173 (502)
T ss_dssp HHHHHTTCSSCEE-EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTTCCEE-EECSEEEECCC--CEECCTT
T ss_pred HHHHHHhhcCCeE-EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccCCceE-EeCCEEEEcCC--cccccCC
Confidence 2222222211121 4456899998765 5544432110 000002378 99999999999 7888999
Q ss_pred CCCccccccCCCCCCcEEecccCCC------------------CC----CCCCCeEEEEcCCcCHHHHHHHHhhhc----
Q 025254 156 IRGLCSFCSSATGTGEVIHSTQYKN------------------GK----PYGGKNVLVVGSGNSGMEIALDLANHA---- 209 (255)
Q Consensus 156 ~~g~~~~~~~~~~~~~~~~~~~~~~------------------~~----~~~~~~v~ViG~g~~~~e~a~~l~~~g---- 209 (255)
+||..++ .+......+ .. .....+++|||+|++|+|+|..+.+.+
T Consensus 174 ipG~~e~---------a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l 244 (502)
T 4g6h_A 174 IPGVTDY---------GHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDL 244 (502)
T ss_dssp CTTHHHH---------CEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTH
T ss_pred ccCcccc---------cCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHH
Confidence 9997653 111111100 00 011247999999999999999997643
Q ss_pred ----------CeEEEEEecCceeecccc
Q 025254 210 ----------AKTSLVVRSPACLWRFEQ 227 (255)
Q Consensus 210 ----------~~v~~~~r~~~~~~~~~~ 227 (255)
.+|+++++.+ +++|..+
T Consensus 245 ~~~~~~~~~~~~V~lve~~~-~il~~~~ 271 (502)
T 4g6h_A 245 RKFLPALAEEVQIHLVEALP-IVLNMFE 271 (502)
T ss_dssp HHHCHHHHHHCEEEEECSSS-SSSTTSC
T ss_pred HhhcccccccceeEEecccc-ccccCCC
Confidence 6899999999 7888643
No 87
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.68 E-value=2.6e-17 Score=141.90 Aligned_cols=170 Identities=16% Similarity=0.235 Sum_probs=111.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhh---CCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~---~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
.+||+|||||++|+++|..|++ .+.+|+|||+.+...-. . .+.. .........++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~-------~-------~~~~--------~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFV-------P-------SNPW--------VGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECG-------G-------GHHH--------HHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCccc-------C-------Cccc--------cccCccCHHHH
Confidence 4799999999999999999999 78999999998743100 0 0000 00112333455
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
...+.+.+.+.++.+ + ..+|++++..+ . .|.+.++ .+ +.||+||+|+| +.|.+|.+||....
T Consensus 62 ~~~l~~~~~~~gv~~--~-~~~v~~id~~~--~--~V~~~~g-------~~-i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIHF--I-AQSAEQIDAEA--Q--NITLADG-------NT-VHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCEE--E-CSCEEEEETTT--T--EEEETTS-------CE-EECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCEE--E-EeEEEEEEcCC--C--EEEECCC-------CE-EECCEEEECCC--CCcCcccCCCCCcc-
Confidence 555666777777763 4 56899997654 3 4666654 67 89999999999 67778888887643
Q ss_pred cCCCCCCcEEecccCCCCCC--------CCCCeEEEEcCCcCH------HHHHHH----HhhhcCe-----EEEEEecCc
Q 025254 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNSG------MEIALD----LANHAAK-----TSLVVRSPA 220 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~--------~~~~~v~ViG~g~~~------~e~a~~----l~~~g~~-----v~~~~r~~~ 220 (255)
.+..+......+... ..+++++|||+|.++ +|+|.. +.+.|.+ |+++++.+
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~- 197 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP- 197 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-
Confidence 233333332221100 113457899986654 888844 4455654 99999987
Q ss_pred ee
Q 025254 221 CL 222 (255)
Q Consensus 221 ~~ 222 (255)
.+
T Consensus 198 ~~ 199 (437)
T 3sx6_A 198 YI 199 (437)
T ss_dssp ST
T ss_pred cc
Confidence 44
No 88
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.64 E-value=1.3e-17 Score=145.80 Aligned_cols=187 Identities=12% Similarity=0.140 Sum_probs=106.6
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCcccc--cC-CCCCeEEecccccccCCCCCCCC------C
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWK--KY-SYDRLRLHLAKQFCQLPHLPFPS------S 73 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~------~ 73 (255)
...+||+|||||++|+++|..|++. +.+|+|||+.+.++-... .. .+........ ....+...+... .
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVT-KTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHH-HHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchh-hcccccccccccccccccc
Confidence 3468999999999999999999877 789999999876541100 00 0000000000 000000000000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
...+....++.+ ..+.++ .++.+++|++++... .+|.+.++ .+ +.||+||+||| +.|..
T Consensus 88 ~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~----~~V~~~~g-------~~-i~yd~lviATG--s~p~~ 146 (493)
T 1m6i_A 88 PSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD----NMVKLNDG-------SQ-ITYEKCLIATG--GTPRS 146 (493)
T ss_dssp GGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG----TEEEETTS-------CE-EEEEEEEECCC--EEECC
T ss_pred hHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCC
Confidence 000111111100 112344 348888999998654 35666654 67 89999999999 66666
Q ss_pred CCCCCcc--ccccCCCCCCcEEecccCCC-----CCCCCCCeEEEEcCCcCHHHHHHHHhh----hcCeEEEEEecC
Q 025254 154 PDIRGLC--SFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLAN----HAAKTSLVVRSP 219 (255)
Q Consensus 154 ~~~~g~~--~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~ViG~g~~~~e~a~~l~~----~g~~v~~~~r~~ 219 (255)
|++++.. .+ ...+.......+ .....+++++|||+|.+|+|+|..+.+ .|.+|+++.+.+
T Consensus 147 ~~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 147 LSAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp CHHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 5543321 11 112222221111 011247899999999999999999987 468899998875
No 89
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.63 E-value=1.4e-16 Score=136.11 Aligned_cols=168 Identities=13% Similarity=0.097 Sum_probs=106.4
Q ss_pred CeEEEECCCHHHHHHHHHHhh---CCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~---~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
+||+|||||++|+++|..|++ .|.+|+|||+.+...... . .. . .........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~--~-~~--------------~-----~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP--A-LP--------------H-----VAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC--S-SC--------------C-----CCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc--c-hh--------------h-----cccCCcCHHHHH
Confidence 589999999999999999999 899999999988432110 0 00 0 001111112233
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~ 164 (255)
..+.+.+.+.++.. +.+ +|++++..+ . .|.+.++.. +..+ +.||+||+|+| +.|..|.++|.+..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~--~--~V~~~~g~~---~~~~-~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS--S--MVYYTKPDG---SMAE-EEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT--T--EEEEECTTS---CEEE-EECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC--C--EEEEccCCc---ccce-eeCCEEEECCC--CCcCccCCCChhhc--
Confidence 44555566677764 555 899987654 3 355544322 2367 89999999999 67777778876532
Q ss_pred CCCCCCcEEecccCCCCCCC------CCCeEEEEcCCc-------------------------CHHHHHHHH----hhhc
Q 025254 165 SATGTGEVIHSTQYKNGKPY------GGKNVLVVGSGN-------------------------SGMEIALDL----ANHA 209 (255)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~------~~~~v~ViG~g~-------------------------~~~e~a~~l----~~~g 209 (255)
..+.......... ..++++|||+|. .++|+|..+ .+.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 2333332211100 125677999992 367877554 4556
Q ss_pred ----CeEEEEEecC
Q 025254 210 ----AKTSLVVRSP 219 (255)
Q Consensus 210 ----~~v~~~~r~~ 219 (255)
.+|+++.+.+
T Consensus 198 ~~~~~~v~~~~~~~ 211 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE 211 (409)
T ss_dssp CTTTEEEEEECSSS
T ss_pred CCCCeEEEEEeCCc
Confidence 4899999876
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.62 E-value=9.6e-16 Score=134.01 Aligned_cols=163 Identities=16% Similarity=0.112 Sum_probs=106.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+++|..|++. .+|+|+|+++.+||.+....+. .+. ++. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g---------~~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEG---------FNK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETT---------TTE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCC---------CCC--CHHHHHHH
Confidence 46999999999999999999999 9999999999888876532110 000 010 22333333
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~~ 166 (255)
+.+.+ ..++. ++++++|.++...+ ..+.+...+. + +... +.+|+||+||| +.|..|.++|.+.
T Consensus 167 l~~~l-~~~v~--~~~~~~v~~i~~~~--~~~~~~~~~~--~--~~~~-~~~d~lvlAtG--a~~~~~~~~g~~~----- 229 (493)
T 1y56_A 167 LVGKL-NENTK--IYLETSALGVFDKG--EYFLVPVVRG--D--KLIE-ILAKRVVLATG--AIDSTMLFENNDM----- 229 (493)
T ss_dssp HHHTC-CTTEE--EETTEEECCCEECS--SSEEEEEEET--T--EEEE-EEESCEEECCC--EEECCCCCTTTTS-----
T ss_pred HHHHH-hcCCE--EEcCCEEEEEEcCC--cEEEEEEecC--C--eEEE-EECCEEEECCC--CCccCCCCCCCCC-----
Confidence 33322 33443 47888998888765 5555543221 1 2247 89999999999 6677777877642
Q ss_pred CCCCcEEecccCCC----CCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeE
Q 025254 167 TGTGEVIHSTQYKN----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKT 212 (255)
Q Consensus 167 ~~~~~~~~~~~~~~----~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v 212 (255)
. .++...+... .....+++++|||+|.+|+| ..+.+.|.++
T Consensus 230 --~-gv~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV~v 274 (493)
T 1y56_A 230 --P-GVFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI--QELERWGIDY 274 (493)
T ss_dssp --T-TEEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTCEE
T ss_pred --C-CEEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCcEE
Confidence 2 2344332211 11234689999999999999 5566666554
No 91
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.58 E-value=1.5e-15 Score=129.43 Aligned_cols=134 Identities=15% Similarity=0.163 Sum_probs=86.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc---------CCCCC---eEEecccccc----cC-----
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYDR---LRLHLAKQFC----QL----- 65 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~---------~~~~~---~~~~~~~~~~----~~----- 65 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+++.|.. +.... .....+.... .+
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 489999999999999999999999999999999877653321 00000 0000000000 00
Q ss_pred ------CCCCCC--CCCCCCC--CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCC--CCcEEEEEcccCCCCceee
Q 025254 66 ------PHLPFP--SSYPMFV--SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIE 133 (255)
Q Consensus 66 ------~~~~~~--~~~~~~~--~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~ 133 (255)
...++. ..-..|+ ...++.+.+.+.+++.++.+ +++++|+++...++ .+.+.|.+.+ .
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i--~~~~~v~~i~~~~~g~~~~~~v~~~~--------g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKI--LLRSEVSQVERIQNDEKVRFVLQVNS--------T 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEE--ECSCCEEEEEECCSCSSCCEEEEETT--------E
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEE--EeCCEEEEEEcccCcCCCeEEEEECC--------C
Confidence 000000 0000111 56678888888888888766 99999999987610 1457777654 4
Q ss_pred EEEeeCEEEEeecCCCCC
Q 025254 134 EYYSGRFLVVASGETTNP 151 (255)
Q Consensus 134 ~~i~~d~vViAtG~~s~~ 151 (255)
+ +++|.||+|+|+++.|
T Consensus 154 ~-i~ad~VVlAtG~~s~p 170 (401)
T 2gqf_A 154 Q-WQCKNLIVATGGLSMP 170 (401)
T ss_dssp E-EEESEEEECCCCSSCG
T ss_pred E-EECCEEEECCCCccCC
Confidence 7 8999999999987754
No 92
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.49 E-value=2.3e-13 Score=116.28 Aligned_cols=133 Identities=15% Similarity=0.144 Sum_probs=88.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCC------------CCCeEEecccccc----cC----
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS------------YDRLRLHLAKQFC----QL---- 65 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~------------~~~~~~~~~~~~~----~~---- 65 (255)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+++.+.... ........+.... .+
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 358999999999999999999999999999999998765331100 0000000000000 00
Q ss_pred -------CCCCC-----CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceee
Q 025254 66 -------PHLPF-----PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE 133 (255)
Q Consensus 66 -------~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (255)
....+ ...++ .....++.+.+.+.+++.++.+ +++++|+++...+ +.+.|.+.+ .
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~--------g 172 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA--------G 172 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT--------E
T ss_pred HHHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC--------c
Confidence 00000 00011 1245678888888888888766 9999999998876 668887765 4
Q ss_pred EEEeeCEEEEeecCCCCCC
Q 025254 134 EYYSGRFLVVASGETTNPF 152 (255)
Q Consensus 134 ~~i~~d~vViAtG~~s~~~ 152 (255)
+ ++||.||+|+|.++.|.
T Consensus 173 ~-i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 173 T-VDAASLVVASGGKSIPK 190 (417)
T ss_dssp E-EEESEEEECCCCSSCGG
T ss_pred E-EEeeEEEECCCCccCCC
Confidence 6 99999999999887553
No 93
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.46 E-value=3.5e-13 Score=114.31 Aligned_cols=134 Identities=14% Similarity=0.128 Sum_probs=88.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC------------CCCC----------eEEeccccc--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYDR----------LRLHLAKQF-- 62 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~------------~~~~----------~~~~~~~~~-- 62 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+++..... .++. +........
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 4799999999999999999999999999999988655421110 0000 000000000
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEE
Q 025254 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~v 141 (255)
..+.............++..+.+.+.+.+.+.|+.+ +.+++|+++...+ +.+. |.+.+.. +..+ +++|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~----~~~~-~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN----EIVD-VRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT----EEEE-EEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEE--EECCEEEEEEEeC--CEEEEEEEEECC----eEEE-EEcCEE
Confidence 011100000111223567888899999888888776 9999999999875 5665 6664322 2268 999999
Q ss_pred EEeecCCC
Q 025254 142 VVASGETT 149 (255)
Q Consensus 142 ViAtG~~s 149 (255)
|.|+|.+|
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999876
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.44 E-value=5.7e-13 Score=100.80 Aligned_cols=108 Identities=17% Similarity=0.218 Sum_probs=79.9
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (255)
+||+|||||++|+.+|..|++.|.+|+++|+.+..-.. . ..+..++. ++......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~---~----------~~~~~~~~------~~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKG---V----------SRVPNYPG------LLDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTT---C----------SCCCCSTT------CTTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccC---c----------hhhhccCC------CcCCCCHHHHHHHH
Confidence 69999999999999999999999999999998632100 0 00000111 11124567888999
Q ss_pred HHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCC
Q 025254 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (255)
Q Consensus 88 ~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~ 148 (255)
.+.+++.++.+ +.+ +|++++..+ +.+.+.+.+ .+ +++|.||+|+|..
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~--------g~-i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE--------GV-EKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS--------CE-EEEEEEEECCTTC
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC--------CE-EEECEEEECCCCC
Confidence 99999988766 888 999998865 567777654 36 8999999999953
No 95
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.43 E-value=1e-12 Score=111.06 Aligned_cols=134 Identities=14% Similarity=0.135 Sum_probs=85.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccc------c------CC---CCCeEEecccccccCCCCC--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK------K------YS---YDRLRLHLAKQFCQLPHLP-- 69 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~------~------~~---~~~~~~~~~~~~~~~~~~~-- 69 (255)
.|||+||||||+|+++|..|++.|++|+|+|+.+.++.... . .. ...+........+..+...
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 48999999999999999999999999999999876543110 0 00 0001000000000000000
Q ss_pred -------CCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEE
Q 025254 70 -------FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 70 -------~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~v 141 (255)
.........++..+...|.+.+.+.|..+ +++++|+++...+ +... +...... +..+ +++|+|
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~~----~~~~-~~a~~v 154 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN----EIVD-VRAKMV 154 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT----EEEE-EEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeecccc----cceE-EEEeEE
Confidence 00011112568889999999999888776 9999999988776 4332 2222211 3367 999999
Q ss_pred EEeecCCC
Q 025254 142 VVASGETT 149 (255)
Q Consensus 142 ViAtG~~s 149 (255)
|.|+|..|
T Consensus 155 IgAdG~~S 162 (397)
T 3oz2_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EeCCcccc
Confidence 99999876
No 96
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.42 E-value=8.7e-15 Score=125.88 Aligned_cols=166 Identities=18% Similarity=0.230 Sum_probs=95.5
Q ss_pred CeEEEECCCHHHHHHHHHHhh--CCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~--~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
+||+|||||++|+++|..|++ .+.+|+|||+.+..+.... .. .+. .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~---~~-----------~~~--------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA---FP-----------HLA--------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG---HH-----------HHH--------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC---cc-----------hhc--------cCccCHHHHHH
Confidence 699999999999999999999 7899999999886542100 00 000 00000011111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccccC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~~~ 165 (255)
.+.+.+++.++.+ + ..+|+.++... . .|.+.++ .+ +.+|+||+|+| +.+.+|.+. ....
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~--~--~v~~~~g-------~~-i~~d~liiAtG--~~~~~pg~~-~~g~--- 119 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA--N--TVTTQSG-------KK-IEYDYLVIATG--PKLVFGAEG-QEEN--- 119 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT--T--EEEETTC-------CE-EECSEEEECCC--CEEECCSBT-HHHH---
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC--C--EEEECCC-------cE-EECCEEEEcCC--cccccCCCC-CcCC---
Confidence 2223344456553 4 45888887654 3 4666553 67 89999999999 666655331 1111
Q ss_pred CCCCCcEEecccCCCC-----CCCCCCeEEEEcCCcCH------HHHHHHH----hhhc----CeEEEEEecC
Q 025254 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSG------MEIALDL----ANHA----AKTSLVVRSP 219 (255)
Q Consensus 166 ~~~~~~~~~~~~~~~~-----~~~~~~~v~ViG~g~~~------~e~a~~l----~~~g----~~v~~~~r~~ 219 (255)
...+....+.... .....++++|||+|.++ +|+|..+ .+.| .+|+++.+.+
T Consensus 120 ---~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~ 189 (430)
T 3h28_A 120 ---STSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP 189 (430)
T ss_dssp ---SCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS
T ss_pred ---ccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc
Confidence 0001111110000 00013456889987654 8888554 4455 4799999877
No 97
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.41 E-value=2.2e-12 Score=110.31 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=86.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC----CcccccCC---------C-----------CCeEEeccccc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY----ASIWKKYS---------Y-----------DRLRLHLAKQF 62 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~----g~~~~~~~---------~-----------~~~~~~~~~~~ 62 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.. |....... . ...........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 489999999999999999999999999999998632 21111000 0 00111111111
Q ss_pred cc--CCCCCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeC
Q 025254 63 CQ--LPHLPF-PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (255)
Q Consensus 63 ~~--~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d 139 (255)
.. +..... ........++..+...+.+.+.+.|+.+ +++++|+++...+ +.+.+.+.... + ++.+ +++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~v~v~~~~-g--~~~~-~~a~ 156 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDV--EYEVGVTDIKFFG--TDSVTTIEDIN-G--NKRE-IEAR 156 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEE--ECSEEEEEEEEET--TEEEEEEEETT-S--CEEE-EEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCC-C--CEEE-EEcC
Confidence 11 110000 0111223678899999999998888766 9999999999876 45444443211 1 2247 9999
Q ss_pred EEEEeecCCC
Q 025254 140 FLVVASGETT 149 (255)
Q Consensus 140 ~vViAtG~~s 149 (255)
.||.|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999765
No 98
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.41 E-value=1.8e-12 Score=113.40 Aligned_cols=136 Identities=19% Similarity=0.193 Sum_probs=88.7
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc--------------CCCCCeEEecccccccCCC--C
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQLPH--L 68 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~--~ 68 (255)
+..+||+|||||++|+++|..|++.|.+|+|+|+.+.....-+. ...+.+..........+.. .
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 88 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPI 88 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEE
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceec
Confidence 45689999999999999999999999999999998754321000 0111110000000000000 0
Q ss_pred ---CCCCCCC--CCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEE
Q 025254 69 ---PFPSSYP--MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVV 143 (255)
Q Consensus 69 ---~~~~~~~--~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vVi 143 (255)
......+ ...++..+.+.|.+.+.+.++.+ +++++|+++...+ +.++|++.++.. +.+ +++|+||.
T Consensus 89 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~g----~~~-~~a~~vVg 159 (500)
T 2qa1_A 89 DFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADI--RRGHEVLSLTDDG--AGVTVEVRGPEG----KHT-LRAAYLVG 159 (500)
T ss_dssp EGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEE--EETCEEEEEEEET--TEEEEEEEETTE----EEE-EEESEEEE
T ss_pred ccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEE--ECCcEEEEEEEcC--CeEEEEEEcCCC----CEE-EEeCEEEE
Confidence 0000111 22457788899999888888665 9999999999876 677777765421 257 99999999
Q ss_pred eecCCC
Q 025254 144 ASGETT 149 (255)
Q Consensus 144 AtG~~s 149 (255)
|+|.+|
T Consensus 160 ADG~~S 165 (500)
T 2qa1_A 160 CDGGRS 165 (500)
T ss_dssp CCCTTC
T ss_pred CCCcch
Confidence 999876
No 99
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.39 E-value=3.5e-12 Score=112.60 Aligned_cols=135 Identities=17% Similarity=0.170 Sum_probs=89.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC------------------------CCCC---e---E
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------------------SYDR---L---R 55 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~------------------------~~~~---~---~ 55 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+..+...+.. .... + .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 83 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRL 83 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeE
Confidence 35899999999999999999999999999999987543110000 0000 0 0
Q ss_pred Eec--ccccc----cCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCC----cEEE
Q 025254 56 LHL--AKQFC----QLPH-----LPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATN----MWNV 120 (255)
Q Consensus 56 ~~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~----~~~v 120 (255)
... ...+. .+.. ...........++..+.+.|.+.+.+.++.+ +++++|+++...+ + .+++
T Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~~~~~v~v 159 (535)
T 3ihg_A 84 AESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAI--RFGTRLLSFRQHD--DDAGAGVTA 159 (535)
T ss_dssp ESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEEC--GGGCSEEEE
T ss_pred EeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEECC--CCccccEEE
Confidence 000 00000 0000 0000011224578899999999998888665 9999999999876 5 6777
Q ss_pred EEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 121 KASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 121 ~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
++.+..+ +.+ +++|+||.|+|.+|
T Consensus 160 ~~~~~~~----~~~-i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 160 RLAGPDG----EYD-LRAGYLVGADGNRS 183 (535)
T ss_dssp EEEETTE----EEE-EEEEEEEECCCTTC
T ss_pred EEEcCCC----eEE-EEeCEEEECCCCcc
Confidence 7766422 267 99999999999876
No 100
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.39 E-value=3e-12 Score=111.99 Aligned_cols=135 Identities=15% Similarity=0.102 Sum_probs=88.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc--------------CCCCCeEEecccccccC-----C
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQL-----P 66 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~-----~ 66 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+......+. ...+.+..........+ .
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 90 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVD 90 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceecc
Confidence 4689999999999999999999999999999997754321000 01111100000000000 0
Q ss_pred CCCCCCCC--CCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEe
Q 025254 67 HLPFPSSY--PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVA 144 (255)
Q Consensus 67 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViA 144 (255)
........ ....++..+.+.|.+.+.+.++.+ +++++|+++...+ +.++|++.++.. +.+ +++|+||.|
T Consensus 91 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v--~~~~~v~~i~~~~--~~v~v~~~~~~g----~~~-~~a~~vVgA 161 (499)
T 2qa2_A 91 FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAEL--LRGHTVRALTDEG--DHVVVEVEGPDG----PRS-LTTRYVVGC 161 (499)
T ss_dssp GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEE--EESCEEEEEEECS--SCEEEEEECSSC----EEE-EEEEEEEEC
T ss_pred cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEEEcCCC----cEE-EEeCEEEEc
Confidence 00011111 123457888899999888887665 9999999999876 667787766421 157 999999999
Q ss_pred ecCCC
Q 025254 145 SGETT 149 (255)
Q Consensus 145 tG~~s 149 (255)
+|.+|
T Consensus 162 DG~~S 166 (499)
T 2qa2_A 162 DGGRS 166 (499)
T ss_dssp CCTTC
T ss_pred cCccc
Confidence 99876
No 101
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.39 E-value=1.3e-12 Score=111.37 Aligned_cols=131 Identities=23% Similarity=0.341 Sum_probs=85.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc------c-------------cc-----CCCCCeEEecc--
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI------W-------------KK-----YSYDRLRLHLA-- 59 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~------~-------------~~-----~~~~~~~~~~~-- 59 (255)
.++||+|||||++|+++|..|++.|.+|+|+|+.+..... + .. .....+.....
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4689999999999999999999999999999998754310 0 00 00011111100
Q ss_pred -cccccCCCCCCC---CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEE
Q 025254 60 -KQFCQLPHLPFP---SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (255)
Q Consensus 60 -~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (255)
.....++..... .......++..+.+.|.+.+.+ ..++++++|+++...+ +.++|++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~- 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR----DSVQFGKRVTRCEEDA--DGVTVWFTDG-------SS- 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG----GGEEESCCEEEEEEET--TEEEEEETTS-------CE-
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc----CEEEECCEEEEEEecC--CcEEEEEcCC-------CE-
Confidence 000111000000 0111224577888888887766 3449999999999887 6788888765 67
Q ss_pred EeeCEEEEeecCCCC
Q 025254 136 YSGRFLVVASGETTN 150 (255)
Q Consensus 136 i~~d~vViAtG~~s~ 150 (255)
+++|+||.|+|.+|.
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 999999999998764
No 102
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.38 E-value=6.5e-13 Score=118.02 Aligned_cols=172 Identities=13% Similarity=0.157 Sum_probs=99.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC-CCCcccccCCCCCeE-------Eecccc---------cccCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLR-------LHLAKQ---------FCQLPHL 68 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~~-------~~~~~~---------~~~~~~~ 68 (255)
..+||+|||||++|+.+|..|++.|.+|+|+|+.. .+|...+......+. +..... ...+...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l 106 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRIL 106 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhh
Confidence 35899999999999999999999999999999974 233211100000000 000000 0000000
Q ss_pred C---CCCC--CCCCCCHHHHHHHHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 025254 69 P---FPSS--YPMFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (255)
Q Consensus 69 ~---~~~~--~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vV 142 (255)
. .+.. .....++..+...+.+.+++ .++.+ ++++|+++...+ +..+.|.+.++ .. +.||.||
T Consensus 107 ~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I---~~~~V~~L~~e~-g~V~GV~t~dG-------~~-I~Ad~VV 174 (651)
T 3ces_A 107 NASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI---FQQAVEDLIVEN-DRVVGAVTQMG-------LK-FRAKAVV 174 (651)
T ss_dssp STTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEESS-SBEEEEEETTS-------EE-EEEEEEE
T ss_pred hcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE---EEEEEEEEEecC-CEEEEEEECCC-------CE-EECCEEE
Confidence 0 0000 00124556788888888877 46653 567999998754 23345666543 67 9999999
Q ss_pred EeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEe
Q 025254 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (255)
Q Consensus 143 iAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r 217 (255)
+|||.++. .+.++|...+ . +.+ +| +.++.+++..|.+.|.+|+.+..
T Consensus 175 LATGt~s~--~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 175 LTVGTFLD--GKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp ECCSTTTC--CEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EcCCCCcc--CccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 99996543 3334444322 1 222 56 78889999999999999988854
No 103
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.38 E-value=6.2e-13 Score=116.30 Aligned_cols=139 Identities=16% Similarity=0.145 Sum_probs=87.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEeccc-cccc-CCCCCCCCCCCCCCCHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAK-QFCQ-LPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 83 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+.+++.......+........ .... ... +........+..++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGR--FCTGTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTT--TTCTTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccc--ccccccccCCHHHH
Confidence 4689999999999999999999999999999999876643111111000000000 0000 000 00011112446788
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcC-CCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDE-ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~-~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
.+.+.+.+.+.++.+ +++++|+++...+ +.+.+.|.+.+..++ +..+ +++|+||+|+|..+.+
T Consensus 169 ~~~L~~~~~~~gv~v--~~~~~v~~i~~~~~~~~~~~v~~~~~~~g--~~~~-i~ad~VV~A~G~~S~~ 232 (497)
T 2bry_A 169 QLLLLKVALLLGVEI--HWGVKFTGLQPPPRKGSGWRAQLQPNPPA--QLAS-YEFDVLISAAGGKFVP 232 (497)
T ss_dssp HHHHHHHHHHTTCEE--EESCEEEEEECCCSTTCCBEEEEESCCCH--HHHT-CCBSEEEECCCTTCCC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEecCCCCEEEEEEEECCCC--CEEE-EEcCEEEECCCCCccc
Confidence 888888888877765 9999999998742 124577777321010 2246 8999999999976543
No 104
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.38 E-value=2.4e-12 Score=114.28 Aligned_cols=134 Identities=15% Similarity=0.101 Sum_probs=86.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc-------------------cccCCCCCeEEe---cccc---
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI-------------------WKKYSYDRLRLH---LAKQ--- 61 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~-------------------~~~~~~~~~~~~---~~~~--- 61 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.+..... |..-........ ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 479999999999999999999999999999998754311 100000000000 0000
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 025254 62 FCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~v 141 (255)
.+.+.............++..+.+.|.+.+.+.++.+ +++++|+++...+ +.++|++...+ .+.+ +++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~----G~~~-~~a~~v 199 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPS----GPYP-VRARYG 199 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETT----EEEE-EEESEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCC----CcEE-EEeCEE
Confidence 0000000111111224678889999999988888766 9999999998876 67777774311 1157 999999
Q ss_pred EEeecCCC
Q 025254 142 VVASGETT 149 (255)
Q Consensus 142 ViAtG~~s 149 (255)
|.|+|.+|
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999876
No 105
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.35 E-value=6.6e-12 Score=108.03 Aligned_cols=62 Identities=6% Similarity=0.073 Sum_probs=49.5
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEecc---EEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~---~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~ 152 (255)
+...+...+.+.+++.|+.+ ++++ +|+++...+ +.+. |.+.++ .+ ++||.||+|+|.++...
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~i--~~~t~~~~V~~i~~~~--~~v~gV~t~~G-------~~-i~Ad~VV~AtG~~s~~l 224 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVKF--VTGTPQGRVVTLIFEN--NDVKGAVTADG-------KI-WRAERTFLCAGASAGQF 224 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESTTTTCEEEEEEET--TEEEEEEETTT-------EE-EECSEEEECCGGGGGGT
T ss_pred cHHHHHHHHHHHHHhcCCEE--EeCCcCceEEEEEecC--CeEEEEEECCC-------CE-EECCEEEECCCCChhhh
Confidence 45678888888888888776 9998 999999866 5666 777664 57 99999999999876543
No 106
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.35 E-value=5.1e-12 Score=104.75 Aligned_cols=129 Identities=12% Similarity=0.206 Sum_probs=78.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccc------------------------
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFC------------------------ 63 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~------------------------ 63 (255)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+++.+..........+.....+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEWT 82 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEEC
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeecc
Confidence 69999999999999999999999999999999888775443221111111100000
Q ss_pred ----cCCCCCC---CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEE
Q 025254 64 ----QLPHLPF---PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY 136 (255)
Q Consensus 64 ----~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i 136 (255)
.+....+ ......+.....+........+ ++.+ +++++|+++...+ +.|.|++.++ ....
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i--~~~~~v~~i~~~~--~~~~v~~~~g-------~~~~ 149 (336)
T 1yvv_A 83 PLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPV--SFSCRITEVFRGE--EHWNLLDAEG-------QNHG 149 (336)
T ss_dssp CCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCE--ECSCCEEEEEECS--SCEEEEETTS-------CEEE
T ss_pred ccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcE--EecCEEEEEEEeC--CEEEEEeCCC-------cCcc
Confidence 0000000 0001111111122223322222 5554 9999999999876 6788887664 3304
Q ss_pred eeCEEEEeecCCC
Q 025254 137 SGRFLVVASGETT 149 (255)
Q Consensus 137 ~~d~vViAtG~~s 149 (255)
.+|+||+|+|..+
T Consensus 150 ~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 150 PFSHVIIATPAPQ 162 (336)
T ss_dssp EESEEEECSCHHH
T ss_pred ccCEEEEcCCHHH
Confidence 5999999999754
No 107
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.35 E-value=7.7e-12 Score=106.34 Aligned_cols=129 Identities=14% Similarity=0.168 Sum_probs=82.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCC-----cccccCCCCCe---------------------E-Eec
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA-----SIWKKYSYDRL---------------------R-LHL 58 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g-----~~~~~~~~~~~---------------------~-~~~ 58 (255)
.++||+|||||++|+++|..|++.|.+|+|+|+.+..+ +.+........ . .+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 35899999999999999999999999999999986432 22211000000 0 000
Q ss_pred -ccccccC--CCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEE
Q 025254 59 -AKQFCQL--PHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (255)
Q Consensus 59 -~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (255)
....... +.. ........++..+.+.|.+.+.. . .++++++|+++...+ +.++|++.++ .+
T Consensus 105 ~g~~~~~~~~~~~--~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~- 168 (398)
T 2xdo_A 105 KGNILSTKNVKPE--NRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK--KKWTLTFENK-------PS- 168 (398)
T ss_dssp SSEEEEECCCGGG--TTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS--SSEEEEETTS-------CC-
T ss_pred CCCchhhcccccc--CCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC--CEEEEEECCC-------cE-
Confidence 0000000 000 00011124566777777665432 3 359999999999876 6788888764 56
Q ss_pred EeeCEEEEeecCCCC
Q 025254 136 YSGRFLVVASGETTN 150 (255)
Q Consensus 136 i~~d~vViAtG~~s~ 150 (255)
+++|+||.|+|.+|.
T Consensus 169 ~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 169 ETADLVILANGGMSK 183 (398)
T ss_dssp EEESEEEECSCTTCS
T ss_pred EecCEEEECCCcchh
Confidence 899999999998764
No 108
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.35 E-value=2.2e-12 Score=107.48 Aligned_cols=128 Identities=16% Similarity=0.230 Sum_probs=81.9
Q ss_pred CeEEEECCCHHHHHHHHHHhh---CCCCeEEEeccCCCCcccccCC---CCCeEEecccccccCCCC-------------
Q 025254 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPHL------------- 68 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~---~g~~v~lie~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~~------------- 68 (255)
+||+|||||++|+++|..|++ .|.+|+|+|+.+..||.+.... +.....+....++.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 599999999999999999999 8999999999998888554321 111222221111100000
Q ss_pred ------CCC---------CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceee
Q 025254 69 ------PFP---------SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE 133 (255)
Q Consensus 69 ------~~~---------~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (255)
.+. +....|.....+..+....++..+..+ +++++|+++...+ +.|.|.+.++ .
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i--~~~~~V~~i~~~~--~~~~v~~~~g-------~ 150 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEV--YFRHRVTQINLRD--DKWEVSKQTG-------S 150 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEESSS-------C
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEE--EeCCEEEEEEEcC--CEEEEEECCC-------C
Confidence 000 000111222223344444455556555 9999999999876 7788888764 5
Q ss_pred EEEeeCEEEEeecC
Q 025254 134 EYYSGRFLVVASGE 147 (255)
Q Consensus 134 ~~i~~d~vViAtG~ 147 (255)
. +.+|.||+|+..
T Consensus 151 ~-~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 P-EQFDLIVLTMPV 163 (342)
T ss_dssp C-EEESEEEECSCH
T ss_pred E-EEcCEEEECCCH
Confidence 6 799999999984
No 109
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.34 E-value=1.1e-11 Score=108.88 Aligned_cols=142 Identities=20% Similarity=0.230 Sum_probs=85.9
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC----Cccccc----------CCCC-----CeE------
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY----ASIWKK----------YSYD-----RLR------ 55 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~----g~~~~~----------~~~~-----~~~------ 55 (255)
|......+||+|||||++|+++|..|++.|++|+|+|+.+.. +..... ..++ ...
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 443334589999999999999999999999999999998722 211100 0000 000
Q ss_pred Eecccc----cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcE-EEEEcccCCCC
Q 025254 56 LHLAKQ----FCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPG 129 (255)
Q Consensus 56 ~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~~ 129 (255)
...... .+.+...+.. .......++..+.+.|.+.+.+.++.+ +++++|+++...+ +.. .|.+...+ +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~~~~V~~v~~~~--~~v~gv~~~~~d-G- 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDV--RERHEVIDVLFEG--ERAVGVRYRNTE-G- 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEEEET--TEEEEEEEECSS-S-
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEE--EcCCEEEEEEEEC--CEEEEEEEEeCC-C-
Confidence 000000 0001110000 011123678899999999998888766 9999999999865 432 24443321 1
Q ss_pred ceeeEEEeeCEEEEeecCCCC
Q 025254 130 REIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 130 ~~~~~~i~~d~vViAtG~~s~ 150 (255)
++.+ +++|.||.|+|.+|.
T Consensus 155 -~~~~-i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 155 -VELM-AHARFIVDASGNRTR 173 (512)
T ss_dssp -CEEE-EEEEEEEECCCTTCS
T ss_pred -CEEE-EEcCEEEECCCcchH
Confidence 2257 999999999998663
No 110
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.34 E-value=5.9e-14 Score=116.35 Aligned_cols=151 Identities=14% Similarity=0.054 Sum_probs=98.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhh--CCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~--~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (255)
..+||+||||||+|++||.+|++ .|++|+|||+...+||......+ .++. ..+
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~-----------------~~~~--------~~l 118 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-----------------LFSA--------MVM 118 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST-----------------TCCC--------EEE
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc-----------------cCCH--------HHH
Confidence 35799999999999999999974 59999999999888874321100 0000 000
Q ss_pred HHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccccc
Q 025254 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (255)
Q Consensus 84 ~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~~ 163 (255)
.......+++.++.+ ..+. . .. ...+.++++++ ..+..+..+|...+
T Consensus 119 ~~~~~~~~~e~Gv~~--~~~~------------~---------------~~-~~~~~~~~~~~--~~~~~~~~~g~~~~- 165 (326)
T 3fpz_A 119 RKPAHLFLQELEIPY--EDEG------------D---------------YV-VVKHAALFIST--VLSKVLQLPNVKLF- 165 (326)
T ss_dssp ETTTHHHHHHTTCCC--EECS------------S---------------EE-EESCHHHHHHH--HHHHHHTSTTEEEE-
T ss_pred HHHHHHHHHHcCCEE--EECC------------c---------------ce-ecceeEEEEcc--hhhhccccccceee-
Confidence 011123344556554 2211 0 22 34444555666 44556667777766
Q ss_pred cCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 164 SSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+...............++++++||+|.++++.+..+...+.++++..+..
T Consensus 166 -----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 -----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp -----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred -----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 554444444444455668899999999999999999999999999988765
No 111
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.34 E-value=5.2e-12 Score=99.55 Aligned_cols=123 Identities=16% Similarity=0.075 Sum_probs=80.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.+||+|||||++|+.+|..|++.|.+|+|+|+.....|.|........ .....+-.+. + ..-+++..+..+
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~--~~~~~~~~~~-----d--~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF--PPGSLLERAY-----D--PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC--CTTCHHHHHC-----C--TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc--chhhHHhhhc-----c--CCCCCHHHHHHH
Confidence 489999999999999999999999999999997432223221110000 0000000000 0 001156688888
Q ss_pred HHHHHHhc-CCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 87 LDHYVSHF-NIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 87 l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
+.+.+++. ++.+ + +++|+++...+ +. +.|.+.++ .+ +++|.||+|+|.++..
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~--~~v~~v~~~~g-------~~-i~a~~VV~A~G~~s~~ 127 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG--NRVVGVRTWEG-------PP-ARGEKVVLAVGSFLGA 127 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET--TEEEEEEETTS-------CC-EECSEEEECCTTCSSC
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC--CEEEEEEECCC-------CE-EECCEEEECCCCChhh
Confidence 88888886 7654 5 57999998765 33 45666543 56 9999999999976543
No 112
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.33 E-value=2.6e-11 Score=107.35 Aligned_cols=134 Identities=13% Similarity=0.211 Sum_probs=86.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc----------------------CCCCC------eEEec
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK----------------------YSYDR------LRLHL 58 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~----------------------~~~~~------~~~~~ 58 (255)
.+||+|||||++|+++|..|++.|.+|+|||+.+..+...+. ...+. .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 479999999999999999999999999999998755321100 00000 00100
Q ss_pred --ccccccCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCC
Q 025254 59 --AKQFCQLPHLPF--------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (255)
Q Consensus 59 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~ 128 (255)
...+..+..... ........++..+.+.|.+.+.+. ++++++|+++...+ +.+++++.+..++
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~--~~v~v~~~~~~~G 178 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD--DHVRATITDLRTG 178 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--SCEEEEEEETTTC
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--CEEEEEEEECCCC
Confidence 001111111000 000112345778888888888775 49999999999876 6677777653222
Q ss_pred CceeeEEEeeCEEEEeecCCCC
Q 025254 129 GREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 129 ~~~~~~~i~~d~vViAtG~~s~ 150 (255)
++.+ +++|+||.|+|.+|.
T Consensus 179 --~~~~-i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 179 --ATRA-VHARYLVACDGASSP 197 (549)
T ss_dssp --CEEE-EEEEEEEECCCTTCH
T ss_pred --CEEE-EEeCEEEECCCCCcH
Confidence 3367 999999999998763
No 113
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.32 E-value=5.2e-12 Score=109.09 Aligned_cols=133 Identities=17% Similarity=0.221 Sum_probs=85.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC--CCCCeEE-ecccccc---------------cCC--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--SYDRLRL-HLAKQFC---------------QLP-- 66 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~--~~~~~~~-~~~~~~~---------------~~~-- 66 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.+++..... ....+.. .....+. .+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 4799999999999999999999999999999988766421100 0000000 0000000 000
Q ss_pred ---------CCCCC-----CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCce
Q 025254 67 ---------HLPFP-----SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGRE 131 (255)
Q Consensus 67 ---------~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~ 131 (255)
..++. ..++.......+.+.+.+.+++.++.+ +++++|+++...+ +. +.|.+.++
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i--~~~~~V~~i~~~~--~~v~~V~~~~G------ 175 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKI--RTNTPVETIEYEN--GQTKAVILQTG------ 175 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETTC------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEE--EeCcEEEEEEecC--CcEEEEEECCC------
Confidence 00000 001111135677788888888888766 9999999998765 44 77877653
Q ss_pred eeEEEeeCEEEEeecCCCCC
Q 025254 132 IEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 132 ~~~~i~~d~vViAtG~~s~~ 151 (255)
.+ +++|.||+|+|.++.|
T Consensus 176 -~~-i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 -EV-LETNHVVIAVGGKSVP 193 (447)
T ss_dssp -CE-EECSCEEECCCCSSSG
T ss_pred -CE-EECCEEEECCCCCcCC
Confidence 57 8999999999987743
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.32 E-value=7.5e-12 Score=106.37 Aligned_cols=131 Identities=14% Similarity=0.116 Sum_probs=86.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc------cccc--------CCC----------CCeEEeccc--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS------IWKK--------YSY----------DRLRLHLAK-- 60 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~------~~~~--------~~~----------~~~~~~~~~-- 60 (255)
++||+|||||++|+++|..|++.|.+|+|+|+.+.... .+.. ..+ ..+......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 58999999999999999999999999999999875411 0000 000 000000000
Q ss_pred ccccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcE--EEEEcccCCCCceeeEEE
Q 025254 61 QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMW--NVKASNLLSPGREIEEYY 136 (255)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~--~v~~~~~~~~~~~~~~~i 136 (255)
....+...... .......++..+.+.+.+.+.+. ++.+ +++++|+++...+ +.+ .|++.++ .+ +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~g~v~~~~g-------~~-~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEM--LFETRIEAVQRDE--RHAIDQVRLNDG-------RV-L 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEE--ECSCCEEEEEECT--TSCEEEEEETTS-------CE-E
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEE--EcCCEEEEEEEcC--CceEEEEEECCC-------CE-E
Confidence 01111110000 00112357788899998888876 6665 9999999998876 566 7777653 57 8
Q ss_pred eeCEEEEeecCCC
Q 025254 137 SGRFLVVASGETT 149 (255)
Q Consensus 137 ~~d~vViAtG~~s 149 (255)
++|.||+|+|.+|
T Consensus 154 ~ad~vV~AdG~~s 166 (399)
T 2x3n_A 154 RPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEEECCCTTC
T ss_pred ECCEEEECCCCCh
Confidence 9999999999876
No 115
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.31 E-value=7e-12 Score=105.90 Aligned_cols=125 Identities=13% Similarity=0.129 Sum_probs=83.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc------ccc--------C----------CCCCeEEecc-cc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI------WKK--------Y----------SYDRLRLHLA-KQ 61 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~------~~~--------~----------~~~~~~~~~~-~~ 61 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..+.. +.. . ....+..... ..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 579999999999999999999999999999998765420 000 0 0000000000 00
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEE
Q 025254 62 FCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~v 141 (255)
+..++... ......++..+.+.+.+.+.+.++.+ +++++|+++.. + + .|++.++ .+ +++|+|
T Consensus 91 ~~~~~~~~---~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~-~--~--~v~~~~g-------~~-~~ad~v 152 (379)
T 3alj_A 91 VSKETFNG---LPWRIMTRSHLHDALVNRARALGVDI--SVNSEAVAADP-V--G--RLTLQTG-------EV-LEADLI 152 (379)
T ss_dssp EEEECGGG---CCEEEEEHHHHHHHHHHHHHHTTCEE--ESSCCEEEEET-T--T--EEEETTS-------CE-EECSEE
T ss_pred eeeccCCC---CceEEECHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEe-C--C--EEEECCC-------CE-EEcCEE
Confidence 00000000 00123457888999999888877665 99999999976 3 3 6777653 57 899999
Q ss_pred EEeecCCC
Q 025254 142 VVASGETT 149 (255)
Q Consensus 142 ViAtG~~s 149 (255)
|+|+|.+|
T Consensus 153 V~AdG~~s 160 (379)
T 3alj_A 153 VGADGVGS 160 (379)
T ss_dssp EECCCTTC
T ss_pred EECCCccH
Confidence 99999765
No 116
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.31 E-value=9e-13 Score=112.20 Aligned_cols=116 Identities=22% Similarity=0.279 Sum_probs=72.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
.++|+|||||++|+++|..|++.+ .+|+|||+.+..... .... ..... . .+..++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~---p~~~----~v~~g-----~----------~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTC---YMSN----EVIGG-----D----------RELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECS---TTHH----HHHHT-----S----------SCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCc---cCHH----HHhcC-----C----------CCHHHHh
Confidence 479999999999999999998875 489999997742110 0000 00000 0 0000000
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCcccc
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~~ 162 (255)
..+ +.+...+++ +...+|++++... . .+.+.++ .+ +.||+||+|+| +++.++.++|..+.
T Consensus 60 ~~~-~~~~~~gv~---~i~~~v~~id~~~--~--~v~~~~g-------~~-i~yd~LviAtG--~~~~~~~i~G~~e~ 119 (401)
T 3vrd_B 60 VGY-DGLRAHGIQ---VVHDSALGIDPDK--K--LVKTAGG-------AE-FAYDRCVVAPG--IDLLYDKIEGYSEA 119 (401)
T ss_dssp ECS-HHHHHTTCE---EECSCEEEEETTT--T--EEEETTS-------CE-EECSEEEECCC--EEECGGGSBTCCSG
T ss_pred hCH-HHHHHCCCE---EEEeEEEEEEccC--c--EEEeccc-------ce-eecceeeeccC--CccccCCccCchhh
Confidence 001 112334655 4556899998754 3 3566554 67 99999999999 77888888887643
No 117
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.31 E-value=2.4e-11 Score=108.16 Aligned_cols=138 Identities=14% Similarity=0.180 Sum_probs=86.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC------CCCeEEEeccCCCCcccc-cC-----------------CCCC--------e
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ------SIPYVILERENCYASIWK-KY-----------------SYDR--------L 54 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~------g~~v~lie~~~~~g~~~~-~~-----------------~~~~--------~ 54 (255)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+++... .. ..+. +
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999998 999999999876654210 00 0000 0
Q ss_pred EEecccccccCCCCC---CCCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEccc---CCC
Q 025254 55 RLHLAKQFCQLPHLP---FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNL---LSP 128 (255)
Q Consensus 55 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~---~~~ 128 (255)
..........++..+ +........++..+.+.|.+.+++.++.+ +++++|+++...++.....|.+.+. .++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEV--YPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 000000001111000 00011123567788999999998888766 9999999998865222233665530 011
Q ss_pred Cce-------eeEEEeeCEEEEeecCCC
Q 025254 129 GRE-------IEEYYSGRFLVVASGETT 149 (255)
Q Consensus 129 ~~~-------~~~~i~~d~vViAtG~~s 149 (255)
+ ..+ +++|+||+|+|.++
T Consensus 193 --~~~~~~~~g~~-i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 193 --APKTTFERGLE-LHAKVTIFAEGCHG 217 (584)
T ss_dssp --CEEEEEECCCE-EECSEEEECCCTTC
T ss_pred --CcccccCCceE-EECCEEEEeeCCCc
Confidence 1 157 99999999999876
No 118
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.30 E-value=3.2e-11 Score=108.53 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=90.1
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhh-CCCCeEEEeccCCCCccccc--------------CCC----------CCeE
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCYASIWKK--------------YSY----------DRLR 55 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie~~~~~g~~~~~--------------~~~----------~~~~ 55 (255)
|..++..+||+|||||++|+++|..|++ .|.+|+|||+.+......+. ... ..+.
T Consensus 26 m~~~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~ 105 (639)
T 2dkh_A 26 TEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVT 105 (639)
T ss_dssp CSSCCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEE
T ss_pred cCCCCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceE
Confidence 3333345799999999999999999999 99999999998754321110 000 0000
Q ss_pred Eecc-----cccc---cCCCCCCC--CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCC--CCcEEEEEc
Q 025254 56 LHLA-----KQFC---QLPHLPFP--SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKAS 123 (255)
Q Consensus 56 ~~~~-----~~~~---~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~--~~~~~v~~~ 123 (255)
.... ..+. .++..... .......++..+.+.|.+.+.+.+..+.++++++|+++...++ ...++|++.
T Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~ 185 (639)
T 2dkh_A 106 FWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLE 185 (639)
T ss_dssp EEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEE
T ss_pred EECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEE
Confidence 0000 0000 00000000 0001135678899999999998876223399999999988652 125777765
Q ss_pred cc---CCCCceeeEEEeeCEEEEeecCCCC
Q 025254 124 NL---LSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 124 ~~---~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
+. .++ +..+ +++|+||.|+|.+|.
T Consensus 186 ~~~~~~~G--~~~~-i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 186 RCDAAHAG--QIET-VQARYVVGCDGARSN 212 (639)
T ss_dssp ECSGGGTT--CEEE-EEEEEEEECCCTTCH
T ss_pred eccccCCC--CeEE-EEeCEEEECCCcchH
Confidence 41 011 2367 999999999998763
No 119
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.30 E-value=2.2e-11 Score=107.07 Aligned_cols=132 Identities=20% Similarity=0.315 Sum_probs=82.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCC-------cccccCCCCC-eEEecc-cccccC---------C--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR-LRLHLA-KQFCQL---------P-- 66 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g-------~~~~~~~~~~-~~~~~~-~~~~~~---------~-- 66 (255)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.++ +.|....... ...... .....+ .
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999987552 1222211000 000000 000000 0
Q ss_pred ------------CCCCCCC--C--CCCC---CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCC
Q 025254 67 ------------HLPFPSS--Y--PMFV---SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (255)
Q Consensus 67 ------------~~~~~~~--~--~~~~---~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~ 127 (255)
.+..+.. . ..+. ....+.+.+.+.+++.++.+ +++++|+++...+ ...+.|.+.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 0000000 0 0011 12566677778888888776 9999999998865 23455777654
Q ss_pred CCceeeEEEeeCEEEEeecCCC
Q 025254 128 PGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 128 ~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+ +.+|.||+|+|+++
T Consensus 262 -----~~-i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 -----EE-IKSRHVVLAVGHSA 277 (549)
T ss_dssp -----CE-EECSCEEECCCTTC
T ss_pred -----CE-EECCEEEECCCCCh
Confidence 67 99999999999876
No 120
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.29 E-value=2.5e-11 Score=101.66 Aligned_cols=63 Identities=11% Similarity=0.069 Sum_probs=48.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+...+.+.+.+.+++.|+.+ +++++|+++...+ ++.+.|.+.++ +..+ +++|.||+|+|.++
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-----~~~~-~~a~~VV~A~G~~s 209 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGA-----EPMT-LSCRVLINAAGLHA 209 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTT-----SCEE-EEEEEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCC-----ceeE-EEeCEEEECCCcch
Confidence 345678888888888888776 8999999999875 23477777653 2257 99999999999876
No 121
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.29 E-value=3.6e-11 Score=97.65 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=81.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccCCCCc-ccccC-CCCCeEEeccc-ccccCCCCCCCCCCCC--CCCH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAK-QFCQLPHLPFPSSYPM--FVSR 80 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~~~g~-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~ 80 (255)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+++ .|... .+..+...... .++.-...++...... ....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 57999999999999999999997 999999999987765 44321 11111111000 0000000111100000 1145
Q ss_pred HHHHHHHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCc-EEEEEc---------ccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 81 AQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNM-WNVKAS---------NLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 81 ~~~~~~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~---------~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.++...+.+.+.+ .++.+ +++++|+++...+ +. ..|.+. ++..+ +... +++|.||+|+|..+
T Consensus 119 ~~~~~~l~~~~~~~~gv~i--~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g--~~~~-i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKL--FNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCM--DPNV-MEAKIVVSSCGHDG 191 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEE--EETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCC--CCEE-EEEEEEEECCCSSS
T ss_pred HHHHHHHHHHHHhcCCCEE--EcCcEEEEEEecC--CeEEEEEEeccccccccCccccC--ceEE-EECCEEEECCCCch
Confidence 5666666666654 56655 9999999998765 33 234442 11111 3367 99999999999543
No 122
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.29 E-value=1.1e-11 Score=107.33 Aligned_cols=136 Identities=10% Similarity=0.104 Sum_probs=85.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC--CcccccCC-----------CC----CeEEecccccccC-CCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY--ASIWKKYS-----------YD----RLRLHLAKQFCQL-PHL 68 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~--g~~~~~~~-----------~~----~~~~~~~~~~~~~-~~~ 68 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+.. +..++... .. ...... .....+ +..
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~-~~~~~~~~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKI-NGIKLYSPDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEE-EEEEEECTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhh-cceEEECCCC
Confidence 589999999999999999999999999999998753 11211100 00 000000 000000 000
Q ss_pred C--CC-CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEe
Q 025254 69 P--FP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVA 144 (255)
Q Consensus 69 ~--~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~vViA 144 (255)
. +. .......++..+.+.+.+.+.+.++.+ +++++|+++...+ +.+. |.+.+..++ +..+ +++|.||.|
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i--~~~~~v~~i~~~~--~~v~gv~~~~~~~G--~~~~-~~ad~VV~A 157 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEI--WDLTTAMKPIFED--GYVKGAVLFNRRTN--EELT-VYSKVVVEA 157 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET--TEEEEEEEEETTTT--EEEE-EECSEEEEC
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEE--EeCcEEEEEEEEC--CEEEEEEEEEcCCC--ceEE-EEcCEEEEC
Confidence 0 00 000112567788899999888878766 9999999998865 4433 555421111 2347 999999999
Q ss_pred ecCCCC
Q 025254 145 SGETTN 150 (255)
Q Consensus 145 tG~~s~ 150 (255)
+|..+.
T Consensus 158 dG~~s~ 163 (453)
T 3atr_A 158 TGYSRS 163 (453)
T ss_dssp CGGGCT
T ss_pred cCCchh
Confidence 998764
No 123
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.29 E-value=4e-12 Score=112.63 Aligned_cols=168 Identities=12% Similarity=0.053 Sum_probs=103.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC-CCCcccccCCCCCeEE----ec------ccc---------cccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRL----HL------AKQ---------FCQLP 66 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~~~----~~------~~~---------~~~~~ 66 (255)
.+||+|||||++|+.+|..|++.|.+|+|+|+.. .+|...+ .+.... .. ... ...+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~C---nps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~ 103 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSC---NPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFK 103 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCS---CSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCc---cccccccchHHHHHHHHHhhhHHHHHhhhccccee
Confidence 5899999999999999999999999999999974 3332111 000000 00 000 00000
Q ss_pred CCCC---CC-C-CCCCCCHHHHHHHHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCE
Q 025254 67 HLPF---PS-S-YPMFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (255)
Q Consensus 67 ~~~~---~~-~-~~~~~~~~~~~~~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~ 140 (255)
.... +. + .....++..+...+.+.++. .++.+ ++++|+++...+ +..+.|.+.++ .. +.+|.
T Consensus 104 ~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI---~~~~Vt~L~~e~-g~V~GV~t~dG-------~~-i~Ada 171 (637)
T 2zxi_A 104 MLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI---KQEEVVDIIVKN-NQVVGVRTNLG-------VE-YKTKA 171 (637)
T ss_dssp EESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE---EESCEEEEEESS-SBEEEEEETTS-------CE-EECSE
T ss_pred ecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE---EEeEEEEEEecC-CEEEEEEECCC-------cE-EEeCE
Confidence 0000 00 0 00123567788888888877 46653 567999998765 23345666553 67 99999
Q ss_pred EEEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEe
Q 025254 141 LVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (255)
Q Consensus 141 vViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r 217 (255)
||+|||.+ +..+.++|...+ . +.+ +| +.++.+++..|.++|.++..+.+
T Consensus 172 VVLATG~~--s~~~~~~G~~~~------~----------------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~t 220 (637)
T 2zxi_A 172 VVVTTGTF--LNGVIYIGDKMI------P----------------GGR---LG-EPRSEGLSDFYRRFDFPLIRFKT 220 (637)
T ss_dssp EEECCTTC--BTCEEEETTEEE------E----------------CSB---TT-BCCBCTHHHHHHHTTCCCEEEEE
T ss_pred EEEccCCC--ccCceeccceec------C----------------CCC---CC-chhHHHHHHHHHhcCCceEEecC
Confidence 99999954 333334444332 1 112 23 56789999999999998877765
No 124
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.28 E-value=1.1e-13 Score=118.97 Aligned_cols=114 Identities=21% Similarity=0.288 Sum_probs=69.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
++|||||||++|+++|..|++.+ .+|+|||+.+... |... +...... ..+..++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~-------l~~v~~g--------~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPA-------FPHLAMG--------WRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGG-------HHHHHHT--------CSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCcc-------HHHHhcC--------CCCHHHhhh
Confidence 58999999999999999999875 6899999987421 0000 0000000 000001111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCCCccc
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~g~~~ 161 (255)
.+.+.+.+.+++ +...+|++++... . +|++.++ .+ +.||+||+||| +++. +++||..+
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~--~--~V~~~~g-------~~-i~YD~LViAtG--~~~~-~~i~G~~e 118 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA--N--TVTTQSG-------KK-IEYDYLVIATG--PKLV-FGAEGQEE 118 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT--T--EEEETTC-------CE-EECSEEEECCC--CEEE-CCSBTHHH
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC--C--EEEECCC-------CE-EECCEEEEeCC--CCcc-CCccCccc
Confidence 111223445655 4455899998754 3 4777664 67 99999999999 4443 45777654
No 125
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.28 E-value=3.2e-11 Score=107.35 Aligned_cols=135 Identities=13% Similarity=0.076 Sum_probs=87.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc-----ccc--------CCCC-----------CeEEeccc--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI-----WKK--------YSYD-----------RLRLHLAK-- 60 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~-----~~~--------~~~~-----------~~~~~~~~-- 60 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..... +.. ..++ ........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 589999999999999999999999999999998633210 000 0000 00000000
Q ss_pred c--cccCCCCCC---CCCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEE
Q 025254 61 Q--FCQLPHLPF---PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (255)
Q Consensus 61 ~--~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (255)
. .+.+..... ........++..+...|.+.+.+.|+.+ +.+++|+++...+ ...+.|.+.+. + ++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~--G--~~~~- 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRG--G--ESVT- 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEET--T--EEEE-
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecC--C--ceEE-
Confidence 0 000110000 0011123567889999999998888766 8999999998753 35677877631 1 3367
Q ss_pred EeeCEEEEeecCCC
Q 025254 136 YSGRFLVVASGETT 149 (255)
Q Consensus 136 i~~d~vViAtG~~s 149 (255)
+++|.||.|+|.+|
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999765
No 126
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.27 E-value=1e-10 Score=99.81 Aligned_cols=136 Identities=18% Similarity=0.148 Sum_probs=84.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCC-eEEEeccCCCCccccc--------------CCC----------CCeEEecc--
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILERENCYASIWKK--------------YSY----------DRLRLHLA-- 59 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~-v~lie~~~~~g~~~~~--------------~~~----------~~~~~~~~-- 59 (255)
.+||+|||||++|+++|..|++.|.+ |+|+|+.+.++..... ..+ ..+.....
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 58999999999999999999999999 9999998754321000 000 00000000
Q ss_pred cccccCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHh-cC-CCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEE
Q 025254 60 KQFCQLPHL-PFPSSYP-MFVSRAQFIEHLDHYVSH-FN-IGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (255)
Q Consensus 60 ~~~~~~~~~-~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (255)
......+.. ......+ ..+++..+.+.|.+.+.+ .+ +.+ +++++|+++.. + +.++|++.+..++ +..+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v--~~~~~v~~i~~-~--~~v~v~~~~~~~g--~~~~- 155 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAV--RTGLGVERIEE-R--DGRVLIGARDGHG--KPQA- 155 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSE--EESEEEEEEEE-E--TTEEEEEEEETTS--CEEE-
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEE--EECCEEEEEec-C--CccEEEEecCCCC--CceE-
Confidence 000000000 0000111 124567888888888765 35 344 99999999988 5 5677777652111 2257
Q ss_pred EeeCEEEEeecCCCC
Q 025254 136 YSGRFLVVASGETTN 150 (255)
Q Consensus 136 i~~d~vViAtG~~s~ 150 (255)
+++|+||.|+|.+|.
T Consensus 156 ~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 156 LGADVLVGADGIHSA 170 (410)
T ss_dssp EEESEEEECCCTTCH
T ss_pred EecCEEEECCCccch
Confidence 899999999998763
No 127
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.27 E-value=2.7e-11 Score=102.91 Aligned_cols=128 Identities=20% Similarity=0.249 Sum_probs=74.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccc-------cCC---CC-------------CeE--------E
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK-------KYS---YD-------------RLR--------L 56 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~-------~~~---~~-------------~~~--------~ 56 (255)
.+|+||||||+|+++|..|++.|++|+|+||.+.+...-. .+. .. ... .
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 5899999999999999999999999999999775421100 000 00 000 0
Q ss_pred ecccccccCCCC--CCCCCCC----CCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCc
Q 025254 57 HLAKQFCQLPHL--PFPSSYP----MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (255)
Q Consensus 57 ~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~ 130 (255)
+........... +...... ..+.+..+.+.|.+ .+...++++++|++++..+ ++.++|++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~-----~~~~~v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK-----GLANTIQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHT-----TCTTTEECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHh-----hccceEEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 000000000000 0000000 01223344443322 2333459999999998765 35678888775
Q ss_pred eeeEEEeeCEEEEeecCCC
Q 025254 131 EIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 131 ~~~~~i~~d~vViAtG~~s 149 (255)
.+ +++|+||.|+|..|
T Consensus 151 --~~-~~adlvVgADG~~S 166 (412)
T 4hb9_A 151 --SH-ENVDVLVGADGSNS 166 (412)
T ss_dssp --CE-EEESEEEECCCTTC
T ss_pred --CE-EEeeEEEECCCCCc
Confidence 67 89999999999876
No 128
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.26 E-value=1.2e-11 Score=104.99 Aligned_cols=134 Identities=16% Similarity=0.095 Sum_probs=82.7
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC------C-c-cccc--------CCC----------CCeEEecccc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------YSY----------DRLRLHLAKQ 61 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~------g-~-~~~~--------~~~----------~~~~~~~~~~ 61 (255)
+||+|||||++|+++|..|++.|.+|+|+|+.+.. + + .+.. ..+ ..+.......
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 82 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAGQ 82 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETTE
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECCc
Confidence 79999999999999999999999999999997631 1 1 1100 000 0011100000
Q ss_pred cccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEE-cccCCCCceeeEEEeeC
Q 025254 62 FCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGREIEEYYSGR 139 (255)
Q Consensus 62 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~i~~d 139 (255)
...+...... .......++.++.+.+.+.+.+.++.+ +++++|+++...+ .+.+.|++ .++ ++.+ +++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~~g-----~~~~-~~a~ 153 (394)
T 1k0i_A 83 RRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATT--VYQAAEVRLHDLQ-GERPYVTFERDG-----ERLR-LDCD 153 (394)
T ss_dssp EEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEE--ESSCEEEEEECTT-SSSCEEEEEETT-----EEEE-EECS
T ss_pred eEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeE--EeceeEEEEEEec-CCceEEEEecCC-----cEEE-EEeC
Confidence 0000000000 001112356677778888777777665 9999999998753 24566776 432 2247 9999
Q ss_pred EEEEeecCCCC
Q 025254 140 FLVVASGETTN 150 (255)
Q Consensus 140 ~vViAtG~~s~ 150 (255)
.||.|+|.+|.
T Consensus 154 ~vV~AdG~~S~ 164 (394)
T 1k0i_A 154 YIAGCDGFHGI 164 (394)
T ss_dssp EEEECCCTTCS
T ss_pred EEEECCCCCcH
Confidence 99999998765
No 129
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.25 E-value=1.3e-11 Score=104.87 Aligned_cols=131 Identities=15% Similarity=0.076 Sum_probs=80.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC----Cc-ccc-c---------CCCC-CeEEeccc-ccccC-CC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY----AS-IWK-K---------YSYD-RLRLHLAK-QFCQL-PH 67 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~----g~-~~~-~---------~~~~-~~~~~~~~-~~~~~-~~ 67 (255)
.++||+|||||++|+++|..|++.|.+|+|+|+.+.. ++ ... . ...+ ........ .+... ..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 3589999999999999999999999999999998653 11 100 0 0000 00000000 00000 00
Q ss_pred CCCCC--CCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEee
Q 025254 68 LPFPS--SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVAS 145 (255)
Q Consensus 68 ~~~~~--~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAt 145 (255)
..... ..........+.+.+.+.+ .++.+ +++++|+++...+ +.++|++.++ .+ +++|+||.|+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i--~~~~~v~~i~~~~--~~v~v~~~~g-------~~-~~ad~vV~Ad 149 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERY--HTSKCLVGLSQDS--ETVQMRFSDG-------TK-AEANWVIGAD 149 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTE--ETTCCEEEEEECS--SCEEEEETTS-------CE-EEESEEEECC
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEE--EcCCEEEEEEecC--CEEEEEECCC-------CE-EECCEEEECC
Confidence 00000 0001233456666666654 25554 9999999999876 6788888764 67 8999999999
Q ss_pred cCCCC
Q 025254 146 GETTN 150 (255)
Q Consensus 146 G~~s~ 150 (255)
|.+|.
T Consensus 150 G~~S~ 154 (397)
T 2vou_A 150 GGASV 154 (397)
T ss_dssp CTTCH
T ss_pred Ccchh
Confidence 98764
No 130
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.24 E-value=5.3e-11 Score=100.02 Aligned_cols=62 Identities=13% Similarity=0.215 Sum_probs=47.8
Q ss_pred HHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
...+.+.+.+.+.+.++.+ +.+++|+++...+ +.+.|.+.+ .. +++|.||+|+|.++....+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i--~~~~~V~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQ--LFNCPVTAIRHDD--DGVTIETAD--------GE-YQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SSEEEEESS--------CE-EEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEcC--CEEEEEECC--------Ce-EEcCEEEEcCCccHHhhcc
Confidence 4577788888888888766 8899999999866 557776654 46 8999999999987654433
No 131
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.23 E-value=1.1e-10 Score=103.80 Aligned_cols=137 Identities=14% Similarity=0.120 Sum_probs=85.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEE------------eccccc------------
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRL------------HLAKQF------------ 62 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~------------~~~~~~------------ 62 (255)
.+||+|||||++|+++|..|++.|.+|+|+|+.+..++...... ..+.. +....+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~-gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAA-GGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCC-SCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcC-ceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 58999999999999999999999999999999987776322100 00000 000000
Q ss_pred ------------------ccCCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEE
Q 025254 63 ------------------CQLPHLPFP-------SSYP-------MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (255)
Q Consensus 63 ------------------~~~~~~~~~-------~~~~-------~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~ 110 (255)
+.-...++. ..++ .......+.+.|.+.+.+.++.+ +++++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i--~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDL--RMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEeeEeE
Confidence 000000010 0000 01235678888888888888766 9999999998
Q ss_pred EcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
..++.....|.+.+. ++ +..+ +.+|.||+|||.++.
T Consensus 283 ~~~~g~v~Gv~~~~~-~g--~~~~-i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 283 KDDKGTVKGILVKGM-YK--GYYW-VKADAVILATGGFAK 318 (571)
T ss_dssp ECTTSCEEEEEEEET-TT--EEEE-EECSEEEECCCCCTT
T ss_pred EcCCCeEEEEEEEeC-CC--cEEE-EECCeEEEeCCCccc
Confidence 754223333544431 11 3357 899999999998764
No 132
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.23 E-value=5.4e-11 Score=107.85 Aligned_cols=61 Identities=13% Similarity=0.257 Sum_probs=49.2
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.+...+...+.+.+++.|+.+ +++++|+++...+ +.+.|.+.++ .+ +++|.||+|+|.++.
T Consensus 414 v~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G-------~~-i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 414 LCPAELTRNVLELAQQQGLQI--YYQYQLQNFSRKD--DCWLLNFAGD-------QQ-ATHSVVVLANGHQIS 474 (676)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCGGGGG
T ss_pred eCHHHHHHHHHHHHHhCCCEE--EeCCeeeEEEEeC--CeEEEEECCC-------CE-EECCEEEECCCcchh
Confidence 345677788888888888766 9999999999877 6687877654 57 899999999998754
No 133
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.23 E-value=8.9e-11 Score=98.99 Aligned_cols=61 Identities=15% Similarity=0.042 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 77 FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
..+...+.+.+.+.+.+.++.+ +.+++|+++...+ +.+.|.+.+ .+ +++|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEI--FEHTPVLHVERDG--EALFIKTPS--------GD-VWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEE--ETTCCCCEEECSS--SSEEEEETT--------EE-EEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCEE--EcCCcEEEEEEEC--CEEEEEcCC--------ce-EEcCEEEECCChhHH
Confidence 3456778888888888888765 8899999998765 566676644 46 899999999998653
No 134
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.22 E-value=1.2e-11 Score=109.89 Aligned_cols=172 Identities=16% Similarity=0.134 Sum_probs=101.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC-CCCcccccCCCCCeE-------Eecccc---------cccCCC-
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLR-------LHLAKQ---------FCQLPH- 67 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~~-------~~~~~~---------~~~~~~- 67 (255)
..+||+|||||++|+++|..|++.|.+|+|+|+.. .+++.++........ +..... ...+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 35899999999999999999999999999999974 344332211000000 000000 000000
Q ss_pred --CCCCCC--CCCCCCHHHHHHHHHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEE
Q 025254 68 --LPFPSS--YPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (255)
Q Consensus 68 --~~~~~~--~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~v 141 (255)
...+.. .....++..+...+.+.+++. ++.+ ++.+|+++...+ +.+. |.+.++ .. +.||.|
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I---~~~~V~~L~~d~--g~V~GV~t~~G-------~~-i~Ad~V 166 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL---LQDTVIGVSANS--GKFSSVTVRSG-------RA-IQAKAA 166 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE---EECCEEEEEEET--TEEEEEEETTS-------CE-EEEEEE
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE---EeeEEEEEEecC--CEEEEEEECCC-------cE-EEeCEE
Confidence 000000 001245667888888888774 6653 456899987765 4443 666543 67 999999
Q ss_pred EEeecCCCCCCCCCCCCccccccCCCCCCcEEecccCCCCCCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEe
Q 025254 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (255)
Q Consensus 142 ViAtG~~s~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r 217 (255)
|+|||.++.. +...|...+ . +.++ + |+.++.+++..|.+.|.+|..+..
T Consensus 167 VLATG~~s~~--~i~~G~~~~------~----------------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 167 ILACGTFLNG--LIHIGMDHF------P----------------GGRS--T-AEPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EECCTTCBTC--EEEETTEEE------E----------------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEE
T ss_pred EECcCCCCCc--cceeeeeee------c----------------cccc--c-CCchhhhhHHHHHhCCceEEeecC
Confidence 9999965332 112222211 0 0111 1 356778999999999999876644
No 135
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.22 E-value=1.3e-10 Score=103.12 Aligned_cols=139 Identities=13% Similarity=0.116 Sum_probs=86.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc--CCC--------------CCeEE------------e
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--YSY--------------DRLRL------------H 57 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~--~~~--------------~~~~~------------~ 57 (255)
..+||+|||||++|+++|..|++.|.+|+|||+.+..++.... ... +.... .
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~ 199 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQN 199 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 3579999999999999999999999999999999877652111 000 00000 0
Q ss_pred ccc------------------ccccCC------CCCCCCCC---CCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEE
Q 025254 58 LAK------------------QFCQLP------HLPFPSSY---PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (255)
Q Consensus 58 ~~~------------------~~~~~~------~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~ 110 (255)
... .-..+. ...++... ....+...+.+.|.+.+.+.++.+ +++++|+++.
T Consensus 200 ~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l~ 277 (566)
T 1qo8_A 200 DIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKLV 277 (566)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEEE
T ss_pred CHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEEE
Confidence 000 000000 00001000 011336678888888888888776 9999999998
Q ss_pred EcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
..++.....|.+.+. ++ +... +++|.||+|||.++.
T Consensus 278 ~~~~g~v~Gv~~~~~-~g--~~~~-i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 278 VNDDHSVVGAVVHGK-HT--GYYM-IGAKSVVLATGGYGM 313 (566)
T ss_dssp ECTTSBEEEEEEEET-TT--EEEE-EEEEEEEECCCCCTT
T ss_pred ECCCCcEEEEEEEeC-CC--cEEE-EEcCEEEEecCCccc
Confidence 754123233554421 11 3357 899999999998765
No 136
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.21 E-value=1.9e-10 Score=103.81 Aligned_cols=139 Identities=16% Similarity=0.219 Sum_probs=85.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-----CCCCeEEEeccCCCCc------cccc------------------CCCCCeEEe
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-----QSIPYVILERENCYAS------IWKK------------------YSYDRLRLH 57 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-----~g~~v~lie~~~~~g~------~~~~------------------~~~~~~~~~ 57 (255)
.+||+||||||+|+++|..|++ .|.+|+|||+.+.... .+.. .....+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 9999999999763321 0000 000111110
Q ss_pred ccc---ccc---cCCCCCCC-CCCC-CCCCHHHHHHHHHHHHHhcC---CCCeeEeccEEEEEEEcC------CCCcEEE
Q 025254 58 LAK---QFC---QLPHLPFP-SSYP-MFVSRAQFIEHLDHYVSHFN---IGPSIRYQRSVESASYDE------ATNMWNV 120 (255)
Q Consensus 58 ~~~---~~~---~~~~~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~---l~~~~~~~~~v~~i~~~~------~~~~~~v 120 (255)
... .+. .++..... .... ...++..+.+.|.+.+.+.+ +.+ +++++|+++...+ +...+++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v--~~g~~v~~~~~d~~~~~~~~~~~V~v 165 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKV--ERPLIPEKMEIDSSKAEDPEAYPVTM 165 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCE--ECSEEEEEEEECGGGTTCTTCCCEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEE--EeCCEEEEEEecCcccccCCCCCEEE
Confidence 000 000 01000000 0111 12567888899988888776 555 9999999998764 1134666
Q ss_pred EEccc---------------------------------------CCCCceeeEEEeeCEEEEeecCCCC
Q 025254 121 KASNL---------------------------------------LSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 121 ~~~~~---------------------------------------~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
++.+. .++ +..+ +++|+||.|+|..|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G--~~~~-i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 166 TLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAG--EIET-VHCKYVIGCDGGHSW 231 (665)
T ss_dssp EEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTT--CEEE-EEEEEEEECCCTTCH
T ss_pred EEEecccccccccccccccccccccccccccccccccccccccCCCC--ceEE-EEeCEEEeccCCCCH
Confidence 65531 111 3367 999999999998763
No 137
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.21 E-value=1.6e-10 Score=97.54 Aligned_cols=59 Identities=10% Similarity=0.006 Sum_probs=46.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+...+...+.+.+.+.++.+ +.+++|+++...+ +.+. |.+.+ .+ +++|.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~v~gv~~~~--------g~-i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKL--LEYTEVKGFLIEN--NEIKGVKTNK--------GI-IKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--ECCceEEEEEEEC--CEEEEEEECC--------cE-EECCEEEECcchhH
Confidence 456678888888888888766 8999999999875 5665 66654 46 89999999999865
No 138
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.20 E-value=2.2e-10 Score=104.09 Aligned_cols=60 Identities=10% Similarity=0.191 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceee-EEEeeCEEEEeecCCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTN 150 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~i~~d~vViAtG~~s~ 150 (255)
+...+...+.+.+.+.|+.+ +++++|+++...+ +.+.|.+.++ . + +++|.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i--~~~t~V~~l~~~~--~~v~V~t~~G-------~~~-i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTC--HYQHELQRLKRID--SQWQLTFGQS-------QAA-KHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESCCEEEEEECS--SSEEEEEC-C-------CCC-EEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCEE--EeCCeEeEEEEeC--CeEEEEeCCC-------cEE-EECCEEEECCCcchh
Confidence 45677778888888888766 9999999999876 5687877653 3 6 899999999998764
No 139
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.18 E-value=9.1e-11 Score=98.75 Aligned_cols=59 Identities=12% Similarity=0.130 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+...+...+.+.+++.|+.+ +.+++|+++...+ +.+.|.+.+ .+ ++||.||+|+|.++
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~--------g~-i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA--------GS-YRAAVLVNAAGAWC 209 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS--------EE-EEESEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC--------CE-EEcCEEEECCChhH
Confidence 345677788888888888766 8999999999876 567777755 57 99999999999865
No 140
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.17 E-value=1.6e-10 Score=98.01 Aligned_cols=57 Identities=18% Similarity=0.096 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
...+...+.+.+.+.++.+ +.+++|+++...+ +.+.|.+.+ .+ +++|.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~v~v~t~~--------g~-i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATL--RAGETVTELVPDA--DGVSVTTDR--------GT-YRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EESCCEEEEEEET--TEEEEEESS--------CE-EEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCEE--ECCCEEEEEEEcC--CeEEEEECC--------CE-EEcCEEEEcCCcCh
Confidence 3466677777777778766 9999999998866 567666543 46 89999999999764
No 141
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.17 E-value=1.7e-10 Score=95.32 Aligned_cols=141 Identities=16% Similarity=0.228 Sum_probs=81.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCc-ccccCC-CCCeEEeccc-ccccCCCCCCCC--CCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYAS-IWKKYS-YDRLRLHLAK-QFCQLPHLPFPS--SYPMFVS 79 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~-~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 79 (255)
.+||+|||||++|+++|..|++. |.+|+|+|+...+++ .|.... +......... .+..-...++.. .+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 58999999999999999999997 999999999987764 553322 2222211110 000000001100 0111122
Q ss_pred HHHHHHHHHHHHHh-cCCCCeeEeccEEEEEEEcCC---------------CCcEE---EEEc------ccCCC-Cceee
Q 025254 80 RAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEA---------------TNMWN---VKAS------NLLSP-GREIE 133 (255)
Q Consensus 80 ~~~~~~~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~---------------~~~~~---v~~~------~~~~~-~~~~~ 133 (255)
..++.+.|.+.+.. .++.+ +.+++|+++...++ .+... |.+. ++... ..+..
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i--~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~ 236 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKL--FNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPN 236 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEE--EETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCE
T ss_pred HHHHHHHHHHHHHhCCCCEE--EeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCce
Confidence 45666777776666 46665 89999999876541 01111 2221 11000 00236
Q ss_pred EEEeeCEEEEeecCCCC
Q 025254 134 EYYSGRFLVVASGETTN 150 (255)
Q Consensus 134 ~~i~~d~vViAtG~~s~ 150 (255)
+ +++++||+|||+.+.
T Consensus 237 ~-i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 237 T-INAPVIISTTGHDGP 252 (344)
T ss_dssp E-EECSEEEECCCSSSS
T ss_pred E-EEcCEEEECCCCCch
Confidence 8 999999999998653
No 142
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.16 E-value=2.6e-10 Score=101.06 Aligned_cols=65 Identities=18% Similarity=0.100 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
+...+...+...+.+.|+.+ +.+++|+++...+ +..+.|.+.+..++ +... +++|.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~tg--~~~~-i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLTD--TTHT-IYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCCC--ceEE-EECCEEEECCCcch
Confidence 44567777777788888776 9999999999875 23356777654333 3367 99999999999875
No 143
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.14 E-value=3.5e-10 Score=95.56 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
+...+...+.+.+.+.++.+ +.+++|+++...+ +.+.|.+.+ .+ +++|.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN--------GS-YTADKLIVSMGAWNS 206 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT--------EE-EEEEEEEECCGGGHH
T ss_pred eHHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC--------CE-EEeCEEEEecCccHH
Confidence 34677788888888888766 8999999999866 567776644 57 899999999997653
No 144
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.13 E-value=8e-10 Score=96.93 Aligned_cols=38 Identities=21% Similarity=0.411 Sum_probs=35.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
.+||+|||+|++|+++|..|++.|.+|+|+||.+..+|
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG 78 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGG 78 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 47999999999999999999999999999999987765
No 145
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.12 E-value=3.3e-11 Score=104.73 Aligned_cols=194 Identities=10% Similarity=0.007 Sum_probs=104.1
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc--cccCCC-----CCeEEe------------------------
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI--WKKYSY-----DRLRLH------------------------ 57 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~--~~~~~~-----~~~~~~------------------------ 57 (255)
||+|||||++|+++|..|++.|.+|+|+|+. ..++. |..... ......
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44442 111100 000000
Q ss_pred -ccc---cc----ccCCC-------CCCCCC-CCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcE-EE
Q 025254 58 -LAK---QF----CQLPH-------LPFPSS-YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NV 120 (255)
Q Consensus 58 -~~~---~~----~~~~~-------~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~-~v 120 (255)
.+. .+ ..+.. ..++.. .........+...+.+.+++.++.+ +.+++| ++...+ +.. .+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~Gv 154 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEEE
Confidence 000 00 00000 000000 0011234577777777777778776 899999 987754 332 23
Q ss_pred EEcccCCCCceeeEEEeeCEEEEeecCCCCCCCCCCC-CccccccCCCCCCcEEecc-----cCCCCCCCCCC-eEEEEc
Q 025254 121 KASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIR-GLCSFCSSATGTGEVIHST-----QYKNGKPYGGK-NVLVVG 193 (255)
Q Consensus 121 ~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~~~~-g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~-~v~ViG 193 (255)
.+.+. + .. +.+|.||+|||.++. .+... +.... .+..+... ...+....+.. .++++|
T Consensus 155 ~v~~~--~----g~-~~a~~VVlAtGg~~~--~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~g 219 (472)
T 2e5v_A 155 VTEKR--G----LV-EDVDKLVLATGGYSY--LYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSLD 219 (472)
T ss_dssp EETTT--E----EE-CCCSEEEECCCCCGG--GSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECGG
T ss_pred EEEeC--C----Ce-EEeeeEEECCCCCcc--cCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEccC
Confidence 43321 1 56 789999999996543 32221 11111 22111000 00010111111 234556
Q ss_pred CCcCHHHHHHHHhhhcCeEEEEEecCceeecccc
Q 025254 194 SGNSGMEIALDLANHAAKTSLVVRSPACLWRFEQ 227 (255)
Q Consensus 194 ~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~~~~~ 227 (255)
+| +.+++..+...|..+ +..+.+ ++++.++
T Consensus 220 gg--~~~~ae~~~~~G~~~-v~~~g~-rf~~~~~ 249 (472)
T 2e5v_A 220 GE--VFLLTETLRGEGAQI-INENGE-RFLFNYD 249 (472)
T ss_dssp GC--CEECCTHHHHTTCEE-EETTCC-CGGGGTC
T ss_pred CC--ceeeehhhcCCceEE-ECCCCC-CCCccCC
Confidence 66 677777777778776 555666 7777654
No 146
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.12 E-value=3.9e-10 Score=98.74 Aligned_cols=65 Identities=18% Similarity=0.185 Sum_probs=49.1
Q ss_pred CHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 79 ~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
+...+...+.+.+.+.|+.+ +.+++|+++...+ +.+.|.+.+..++ ++.+ +++|.||+|+|.++.
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~G--~~~~-i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDTG--KKYS-WQARGLVNATGPWVK 211 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESCEEECCGGGHH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCCC--CEEE-EECCEEEECCChhHH
Confidence 45677778888888888766 8999999999876 6677877542222 2347 999999999998753
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.11 E-value=5.8e-10 Score=94.69 Aligned_cols=60 Identities=8% Similarity=0.036 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+...+...+.+.+++.++.+ +.+++|+++...+ ...+.|.+.+ .+ +++|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i--~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDI--IQNCEVTGFIKDG-EKVTGVKTTR--------GT-IHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEESS-SBEEEEEETT--------CC-EEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCEE--EcCCeEEEEEEeC-CEEEEEEeCC--------ce-EECCEEEECCchhH
Confidence 345578888888888888766 9999999998865 2346676654 35 89999999999765
No 148
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.10 E-value=2.1e-10 Score=101.34 Aligned_cols=62 Identities=8% Similarity=0.087 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.++..+..+|.+.+.+.|+.+ +.+ +|+++...++...+.|.+.++ .+ +++|.||+|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG-------RT-LEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-ECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC-------cE-EEeCEEEECCCCchh
Confidence 456788889999888888765 788 899998865222356666553 57 999999999998664
No 149
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.07 E-value=8.5e-10 Score=90.56 Aligned_cols=105 Identities=23% Similarity=0.320 Sum_probs=64.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCc-ccccC-CCCCeEEeccc-ccccCCCCCCCC--CCCCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYAS-IWKKY-SYDRLRLHLAK-QFCQLPHLPFPS--SYPMFVS 79 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~-~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ 79 (255)
.+||+|||||++|+++|..|++. |.+|+|+|+....|+ .|... .+......... .+..-....+.. .+.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 46999999999999999999998 999999999887764 55321 11111111100 000000001110 1111123
Q ss_pred HHHHHHHHHHHHHhc-CCCCeeEeccEEEEEEEcC
Q 025254 80 RAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDE 113 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~-~l~~~~~~~~~v~~i~~~~ 113 (255)
..++...+.+.+... ++.+ +.+++|+++...+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i--~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKL--FNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEE--ETTEEEEEEEECC
T ss_pred hHHHHHHHHHHHHHhcCcEE--Eecceeeeeeecc
Confidence 456677777777664 6655 8899999998764
No 150
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.06 E-value=2.2e-09 Score=95.54 Aligned_cols=145 Identities=14% Similarity=0.113 Sum_probs=85.5
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc-c-ccc-------CC--CCCeE---Ee---ccccc-
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS-I-WKK-------YS--YDRLR---LH---LAKQF- 62 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~-~-~~~-------~~--~~~~~---~~---~~~~~- 62 (255)
|......+||+|||||++|+++|..|++.|.+|+|+||....++ + +.. .. .+... .+ .....
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 54444468999999999999999999999999999999875532 1 110 00 00000 00 00000
Q ss_pred ------------------ccCCCCCCCC---------CCCCC-----------------CCHHHHHHHHHHHHHhcCCCC
Q 025254 63 ------------------CQLPHLPFPS---------SYPMF-----------------VSRAQFIEHLDHYVSHFNIGP 98 (255)
Q Consensus 63 ------------------~~~~~~~~~~---------~~~~~-----------------~~~~~~~~~l~~~~~~~~l~~ 98 (255)
+.-...++.. ....+ .+...+...|.+.+.+.++.+
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i 160 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI 160 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEE
Confidence 0000000100 00000 123567777888888878766
Q ss_pred eeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 99 SIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 99 ~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
+.+++|+++...++.....|.+.+..++ +... +.++.||+|||.++.
T Consensus 161 --~~~~~v~~L~~~~~g~v~Gv~~~~~~~g--~~~~-i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 161 --FSEWYALDLVKNQDGAVVGCTALCIETG--EVVY-FKARATVLATGGAGR 207 (588)
T ss_dssp --EETEEEEEEEECTTSCEEEEEEEETTTC--CEEE-EEEEEEEECCCCCGG
T ss_pred --EeCcEEEEEEECCCCEEEEEEEEEcCCC--eEEE-EEcCEEEECCCCCcc
Confidence 9999999998753223344554332222 3357 899999999998764
No 151
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.05 E-value=1.7e-10 Score=98.28 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~ 42 (255)
.+||+|||||++|+++|+.|++. |.+|+|+|+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 47999999999999999999999 9999999997643
No 152
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.04 E-value=3.4e-09 Score=94.18 Aligned_cols=137 Identities=16% Similarity=0.119 Sum_probs=84.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccC--CC----C------CeEEeccccc------------
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--SY----D------RLRLHLAKQF------------ 62 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~--~~----~------~~~~~~~~~~------------ 62 (255)
.+||+|||+|++|+++|..|++.|.+|+|+|+.+..++..... .. . .+. +....+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIE-DKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCC-CCTHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCC
Confidence 5799999999999999999999999999999998777532110 00 0 000 000000
Q ss_pred -----------------------ccCC------CCCCCCCC-C--CCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEE
Q 025254 63 -----------------------CQLP------HLPFPSSY-P--MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (255)
Q Consensus 63 -----------------------~~~~------~~~~~~~~-~--~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~ 110 (255)
..+. ...++... + .......+...|.+.+.+.++.+ +++++|+++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i--~~~t~v~~l~ 282 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDI--RLNSRVVRIL 282 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEE--ESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeE--EecCEEEEEE
Confidence 0000 00000000 0 01235678888888888888766 9999999997
Q ss_pred EcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
..+....+.|.+.+. ++ +... +.+|.||+|||.++.
T Consensus 283 ~~~~g~v~GV~~~~~-~G--~~~~-i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKGE-YT--GYYV-IKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEET-TT--EEEE-EECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEeC-CC--cEEE-EEcCEEEEeCCCCcc
Confidence 653123334555431 11 3357 899999999997764
No 153
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.02 E-value=9.5e-10 Score=97.35 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHhc-CCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 78 VSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~-~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.++..+.+.|.+.+.+. |+.+ +++ +|+++...++.....|.+.++ .+ +++|.||+|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G-------~~-i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG-------RV-FDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EECCEEEECCCCchh
Confidence 56788999999999888 8776 888 999998755222355666553 67 999999999997654
No 154
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.01 E-value=5.1e-10 Score=98.16 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.++..+.+.|.+.+.+.|+.+ +.+ +|+++...++.....|.+.++ .+ +++|.||.|+|.+|.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g-------~~-~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH-------GE-ISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 567889999999888888765 888 999998855222356666553 57 999999999998764
No 155
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.01 E-value=4.5e-10 Score=89.57 Aligned_cols=41 Identities=17% Similarity=0.356 Sum_probs=38.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~ 48 (255)
+||+||||||+|+++|..|++.|++|+|+|+.+.+||....
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 79999999999999999999999999999999999886543
No 156
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.99 E-value=4.1e-09 Score=90.27 Aligned_cols=37 Identities=30% Similarity=0.386 Sum_probs=35.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+||
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 6999999999999999999999999999999887776
No 157
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.98 E-value=2e-09 Score=91.96 Aligned_cols=37 Identities=30% Similarity=0.407 Sum_probs=35.1
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
+||+|||||++|+++|+.|++.|.+|+|+|+.+.+||
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGG 37 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCC
Confidence 4899999999999999999999999999999988876
No 158
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.97 E-value=3.3e-09 Score=93.33 Aligned_cols=62 Identities=13% Similarity=0.220 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCC
Q 025254 78 VSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
.++..+.+.|.+.+.+ .|+.+ +.+ +|+++...++.....|.+.++ .+ +++|+||.|+|.+|.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN-------GE-ISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 4678888999998888 78765 888 699998765222335655443 56 899999999998664
No 159
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.97 E-value=1.4e-09 Score=92.97 Aligned_cols=37 Identities=27% Similarity=0.481 Sum_probs=35.1
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
+||+|||||++|+++|+.|++.|.+|+|+|+.+.+||
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4899999999999999999999999999999988876
No 160
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.96 E-value=1.7e-09 Score=95.40 Aligned_cols=37 Identities=22% Similarity=0.434 Sum_probs=33.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
.+||+|||||++|+++|..|++ |.+|+|+|+....++
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 5899999999999999999999 999999999886543
No 161
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.94 E-value=9.1e-09 Score=91.98 Aligned_cols=66 Identities=11% Similarity=0.062 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
...+...|.+.+.+.++.+ +.++.|+++...+ .....|.+.+..++ +... +.++.||+|||+++..
T Consensus 154 G~~l~~~L~~~~~~~gv~i--~~~~~v~~Li~~~-g~v~Gv~~~~~~~G--~~~~-i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSY--FVEYFALDLLMEN-GECRGVIALCIEDG--TIHR-FRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEE--EETEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEE--EEceEEEEEEEEC-CEEEEEEEEEcCCC--cEEE-EEcCeEEECCCccccc
Confidence 4467777778777777665 9999999998754 22233444332222 3357 8999999999987653
No 162
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.93 E-value=5.2e-09 Score=96.94 Aligned_cols=59 Identities=14% Similarity=0.070 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecCCC
Q 025254 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (255)
Q Consensus 78 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s 149 (255)
.+...+...+.+.+.+.|+.+ +.+++|+++...+ +. +.|.+.+ .+ ++||.||+|+|.++
T Consensus 148 v~p~~l~~~L~~~a~~~Gv~i--~~~t~V~~i~~~~--~~v~~V~t~~--------G~-i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 148 ASAARAVQLLIKRTESAGVTY--RGSTTVTGIEQSG--GRVTGVQTAD--------GV-IPADIVVSCAGFWG 207 (830)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEEET--TEEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred EcHHHHHHHHHHHHHHcCCEE--ECCceEEEEEEeC--CEEEEEEECC--------cE-EECCEEEECCccch
Confidence 355678888888888888766 8899999998865 44 3466544 57 99999999999875
No 163
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.92 E-value=9.9e-09 Score=91.15 Aligned_cols=39 Identities=15% Similarity=0.350 Sum_probs=34.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
..+||+|||||++|+++|+.|++.|.+|+|+|+.+..+|
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~~G 69 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFAEG 69 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCC
Confidence 358999999999999999999999999999999874443
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.92 E-value=7.7e-09 Score=89.38 Aligned_cols=100 Identities=18% Similarity=0.200 Sum_probs=78.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||||++|+.+|..|.+.|.+|+++|+.+.+. +. ...++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l----------------------~~-----------~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL----------------------PT-----------MDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC----------------------TT-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc----------------------cc-----------cCHHHHHH
Confidence 5799999999999999999999999999999976431 00 01366777
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...+ +.+.+.+.++ .+ +.+|.||+|+| .+|+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~~D~vv~A~G--~~p~~ 266 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG-------EV-LEADRVLVAVG--RRPYT 266 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC-------eE-EEcCEEEECcC--CCcCC
Confidence 778888888776 9999999998765 5566666543 67 89999999999 44444
No 165
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.91 E-value=1.8e-08 Score=89.89 Aligned_cols=139 Identities=16% Similarity=0.200 Sum_probs=80.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccCCCCc--ccccCC----C---CCeEE---ec---ccc--------
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYAS--IWKKYS----Y---DRLRL---HL---AKQ-------- 61 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~~~g~--~~~~~~----~---~~~~~---~~---~~~-------- 61 (255)
.+||+|||||++|+++|..|++.| .+|+|+|+....++ .|.... . +.... +. ...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 589999999999999999999999 99999999864432 111100 0 00000 00 000
Q ss_pred ----------------cccCCCCC---C-CCCCCC-------C---CCHHHHHHHHHHHHHhcC-CCCeeEeccEEEEEE
Q 025254 62 ----------------FCQLPHLP---F-PSSYPM-------F---VSRAQFIEHLDHYVSHFN-IGPSIRYQRSVESAS 110 (255)
Q Consensus 62 ----------------~~~~~~~~---~-~~~~~~-------~---~~~~~~~~~l~~~~~~~~-l~~~~~~~~~v~~i~ 110 (255)
-..|.... + ...... + .+...+...|.+.+.+.+ +.+ +.+++|+++.
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i--~~~~~v~~l~ 162 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQR--FDEHFVLDIL 162 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEE--EETEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEE--EeCCEEEEEE
Confidence 00010000 0 000000 0 114567777777777766 554 9999999998
Q ss_pred EcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCC
Q 025254 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (255)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~ 151 (255)
..+ .....|...+..++ +... +.++.||+|||.++..
T Consensus 163 ~~~-g~v~Gv~~~~~~~G--~~~~-i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 163 VDD-GHVRGLVAMNMMEG--TLVQ-IRANAVVMATGGAGRV 199 (602)
T ss_dssp EET-TEEEEEEEEETTTT--EEEE-EECSCEEECCCCCGGG
T ss_pred EeC-CEEEEEEEEEcCCC--cEEE-EEcCeEEECCCCCccc
Confidence 765 12223333221222 3347 9999999999987654
No 166
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.90 E-value=3.8e-09 Score=91.32 Aligned_cols=38 Identities=21% Similarity=0.397 Sum_probs=35.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC------CCeEEEeccCCCCc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS------IPYVILERENCYAS 44 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g------~~v~lie~~~~~g~ 44 (255)
++||+|||||++||++|+.|++.| .+|+|+|+.+.+||
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 479999999999999999999999 89999999988876
No 167
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.90 E-value=1.4e-08 Score=85.85 Aligned_cols=97 Identities=14% Similarity=0.066 Sum_probs=78.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. . ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------G-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------c-ccCHHHHHH
Confidence 68999999999999999999999999999999764311 0 011366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.+++|+++...+ +.+.|.+.++ .+ +.+|.||+|+|.
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-i~~d~vv~a~G~ 241 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG-------EV-IPCDLVVSAVGL 241 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSCE
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC-------CE-EECCEEEECcCC
Confidence 888888888776 9999999998765 5667777653 67 899999999994
No 168
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.88 E-value=1.6e-08 Score=87.62 Aligned_cols=107 Identities=16% Similarity=0.120 Sum_probs=80.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|++.|.+|+++|+.+.+... ...++.+
T Consensus 168 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~ 214 (464)
T 2eq6_A 168 LPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ---------------------------------GDPETAA 214 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------------------------SCHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------------------------------cCHHHHH
Confidence 3579999999999999999999999999999997643100 0136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
.+.+.+++.++.+ +++++|+++...+ +.+.+.+.+..++ ++.+ +.+|.||+|+| ..|+..
T Consensus 215 ~l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 215 LLRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGG--EGEE-VVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCC--SCEE-EEESEEEECSC--EEESCT
T ss_pred HHHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCC--ceeE-EEcCEEEECCC--cccCCC
Confidence 8888888888776 9999999998765 5566666421001 2247 99999999999 455543
No 169
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.86 E-value=2.9e-08 Score=86.25 Aligned_cols=107 Identities=15% Similarity=0.261 Sum_probs=79.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||||+.|+.+|..|++.|.+|+++|+.+.+... . ..++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~-~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS--------------------------------M-DGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS--------------------------------S-CHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc--------------------------------c-CHHHHHH
Confidence 589999999999999999999999999999998753210 0 1367788
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...+..+...+.+.+..++ +..+ +.+|.||+|+| .+|+.
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~~ 289 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKTN--KQEN-LEAEVLLVAVG--RRPYI 289 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCCC--CceE-EECCEEEECCC--CCcCC
Confidence 888888888776 9999999998721124566666521111 2267 89999999999 44544
No 170
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.85 E-value=2.6e-08 Score=86.04 Aligned_cols=104 Identities=15% Similarity=0.151 Sum_probs=79.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|++.|.+|+++|+.+.+.. . ...++.+
T Consensus 169 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~ 215 (455)
T 1ebd_A 169 VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS----------------------G-----------FEKQMAA 215 (455)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------------------T-----------SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc----------------------c-----------cCHHHHH
Confidence 358999999999999999999999999999999764310 0 0136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ +...+.+.... +..+ +.+|.||+|+| ..|+.
T Consensus 216 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g----~~~~-~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 216 IIKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEANG----ETKT-IDADYVLVTVG--RRPNT 272 (455)
T ss_dssp HHHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEETT----EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeCC----ceeE-EEcCEEEECcC--CCccc
Confidence 7888888888776 9999999998765 45556654211 2267 89999999999 44543
No 171
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.84 E-value=5.1e-08 Score=87.79 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=34.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~ 42 (255)
..+||+|||||.+|+++|..|++.|.+|+|+|+....
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 3589999999999999999999999999999998754
No 172
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.84 E-value=1.1e-08 Score=88.11 Aligned_cols=101 Identities=20% Similarity=0.301 Sum_probs=77.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|++|+.+|..|++.|.+|+++|+.+.+... +. ..++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~~-~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------------------YL-DKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------TC-CHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------------------cC-CHHHHH
Confidence 4689999999999999999999999999999997743210 00 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ ..+.+.+.+ .+ +.+|.||+|+| ..|+.
T Consensus 196 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~d~vi~a~G--~~p~~ 248 (447)
T 1nhp_A 196 VLTEEMEANNITI--ATGETVERYEGDG--RVQKVVTDK--------NA-YDADLVVVAVG--VRPNT 248 (447)
T ss_dssp HHHHHHHTTTEEE--EESCCEEEEECSS--BCCEEEESS--------CE-EECSEEEECSC--EEESC
T ss_pred HHHHHHHhCCCEE--EcCCEEEEEEccC--cEEEEEECC--------CE-EECCEEEECcC--CCCCh
Confidence 8888888888766 9999999997642 333455532 57 89999999999 44543
No 173
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.84 E-value=2.6e-08 Score=85.95 Aligned_cols=102 Identities=13% Similarity=0.068 Sum_probs=79.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|.+.|.+|+++|+.+.+.. . . ..++.+
T Consensus 166 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~----------~-~~~~~~ 212 (450)
T 1ges_A 166 LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP----------------------S----------F-DPMISE 212 (450)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T----------S-CHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh----------------------h----------h-hHHHHH
Confidence 357999999999999999999999999999998764310 0 0 025677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ ++...|.+.++ .+ +.+|.||+|+| .+|+.
T Consensus 213 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-i~~D~vv~a~G--~~p~~ 267 (450)
T 1ges_A 213 TLVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG-------RS-ETVDCLIWAIG--REPAN 267 (450)
T ss_dssp HHHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC-------cE-EEcCEEEECCC--CCcCC
Confidence 7888888888776 9999999998754 13366777653 57 89999999999 44544
No 174
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.83 E-value=2.2e-08 Score=90.08 Aligned_cols=69 Identities=13% Similarity=0.101 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhc--CCCCeeEeccEEEEEEEcCC--CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 80 RAQFIEHLDHYVSHF--NIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 80 ~~~~~~~l~~~~~~~--~l~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
...+...|.+.+.+. ++.+ +.++.|+++...++ .....|...+..++ +... +.++.||+|||+.+....
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i--~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g--~~~~-i~Ak~VVLATGG~g~~y~ 237 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRI--IERIFIVKLLLDKNTPNRIAGAVGFNLRAN--EVHI-FKANAMVVACGGAVNVYR 237 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTE--ECSEEECCCEECSSSTTBEEEEEEEESSSS--CEEE-EECSEEEECCCCBCSSSC
T ss_pred HHHHHHHHHHHHHhcCCCcEE--EEceEEEEEEEeCCccceEEEEEEEEcCCC--cEEE-EEeCEEEECCCccccccc
Confidence 345666777777776 7776 89999999887652 12233433322222 3367 899999999998775433
No 175
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.83 E-value=2.9e-08 Score=85.97 Aligned_cols=100 Identities=17% Similarity=0.107 Sum_probs=78.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+.+++|||||+.|+.+|..|.+.|.+|+++++.+.+.. . . ..++.+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~-~-~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------------------Q-F-DPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T-S-CHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------------------c-c-CHHHHHH
Confidence 57999999999999999999999999999998764310 0 0 1356677
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceee-EEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...+ +...|.+.++ . + +.+|.||+|+| ..|+.
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G-------~~~-i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG-------TRL-EGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC-------CEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC-------cEE-EEcCEEEECCC--CCcCC
Confidence 778888888776 9999999998765 4466777653 4 7 99999999999 44544
No 176
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.83 E-value=6.1e-10 Score=94.08 Aligned_cols=119 Identities=16% Similarity=0.125 Sum_probs=73.8
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCC---Ccc--cccCCCC----------C-e----EEecccccccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYD----------R-L----RLHLAKQFCQL 65 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~---g~~--~~~~~~~----------~-~----~~~~~~~~~~~ 65 (255)
+||+|||||++|+++|..|++. |.+|+|+|+.+.+ |.. +..+... . + .......+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 4899999999999999999999 9999999998765 221 1111000 0 0 0000000000
Q ss_pred CCCCCCCC--CC-CCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEE
Q 025254 66 PHLPFPSS--YP-MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (255)
Q Consensus 66 ~~~~~~~~--~~-~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vV 142 (255)
....+... .+ ...++.++.+.|.+.+.+.++.+ +++++|+++... .+ +++|.||
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i--~~~~~v~~i~~~--------------------~~-~~ad~vV 136 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAI--RFESPLLEHGEL--------------------PL-ADYDLVV 136 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEE--ETTCCCCSGGGC--------------------CG-GGCSEEE
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEE--EeCCEeccchhc--------------------cc-ccCCEEE
Confidence 00000000 00 12467889999999888877665 888888665320 23 6789999
Q ss_pred EeecCCCC
Q 025254 143 VASGETTN 150 (255)
Q Consensus 143 iAtG~~s~ 150 (255)
.|+|.+|.
T Consensus 137 ~AdG~~S~ 144 (381)
T 3c4a_A 137 LANGVNHK 144 (381)
T ss_dssp ECCGGGGG
T ss_pred ECCCCCch
Confidence 99998764
No 177
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.82 E-value=2.5e-08 Score=87.79 Aligned_cols=102 Identities=12% Similarity=0.018 Sum_probs=81.9
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
..+.+++|||||+.|+..|..+++.|.+|+|+++...+. .+ -.++.
T Consensus 221 ~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~-----------------------~~-----------D~ei~ 266 (542)
T 4b1b_A 221 KDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR-----------------------GF-----------DQQCA 266 (542)
T ss_dssp SCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST-----------------------TS-----------CHHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc-----------------------cc-----------chhHH
Confidence 346899999999999999999999999999998754321 00 13778
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
..+.+.+++.++.+ +.+..+.++...+ +...|.+.+. .. +.+|.|++|+| -+|+..
T Consensus 267 ~~l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~-------~~-~~~D~vLvAvG--R~Pnt~ 322 (542)
T 4b1b_A 267 VKVKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK-------TS-ELYDTVLYAIG--RKGDID 322 (542)
T ss_dssp HHHHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSC--EEESCG
T ss_pred HHHHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC-------Ce-EEEEEEEEccc--ccCCcc
Confidence 88888888888876 9999999999877 6777777664 56 78999999999 556553
No 178
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.80 E-value=7.7e-08 Score=83.92 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=81.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|.+.|.+|+++++.+.+... ...++.+
T Consensus 197 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~~~ 243 (491)
T 3urh_A 197 VPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILGG---------------------------------MDGEVAK 243 (491)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSSS---------------------------------SCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccccc---------------------------------CCHHHHH
Confidence 4679999999999999999999999999999987743100 0136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ +...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 244 ~l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~Vi~a~G--~~p~~ 302 (491)
T 3urh_A 244 QLQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKGG--EATT-LDAEVVLIATG--RKPST 302 (491)
T ss_dssp HHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTSC--CCEE-EEESEEEECCC--CEECC
T ss_pred HHHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCCC--ceEE-EEcCEEEEeeC--CccCC
Confidence 8888888888776 9999999998876 5666766642211 2267 89999999999 44544
No 179
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.79 E-value=2e-08 Score=86.92 Aligned_cols=102 Identities=15% Similarity=0.145 Sum_probs=76.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|++.|.+|+++|+.+.+... . ..++.+
T Consensus 170 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~-~~~~~~ 216 (458)
T 1lvl_A 170 LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT--------------------------------Y-DSELTA 216 (458)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT--------------------------------S-CHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc--------------------------------c-CHHHHH
Confidence 3579999999999999999999999999999998753200 0 136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
++.+.+++.++.+ +.+++|++++. + + +.+...++ ++.+ +.+|.||+|+| .+|+.+
T Consensus 217 ~l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G-----~~~~-i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 217 PVAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKG-----GQLR-LEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSS-----CCCE-ECCSCEEECCC--EEECCS
T ss_pred HHHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCC-----ceEE-EECCEEEECcC--CCcCCC
Confidence 7778888888776 99999999975 3 3 44442111 2257 89999999999 555543
No 180
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.79 E-value=1e-08 Score=88.37 Aligned_cols=33 Identities=30% Similarity=0.455 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC-CCeEEEecc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILERE 39 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~ 39 (255)
.+||+|||||++|+++|+.|++.| .+|+|+|+.
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 579999999999999999999999 999999993
No 181
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.76 E-value=7e-08 Score=86.84 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCeEEEECCCHHHHHHHHHHh---h-CCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLS---L-QSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~---~-~g~~v~lie~~~~ 41 (255)
.+||+|||||++|+++|..|+ + .|.+|+|+||...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999874
No 182
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.76 E-value=9e-08 Score=83.10 Aligned_cols=106 Identities=14% Similarity=0.210 Sum_probs=78.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||||+.|+.+|..|.+.|.+|+++|+.+.+... . . ..++.+.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------~----------~-~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV---------------------G----------I-DMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS---------------------S----------C-CHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc---------------------c----------c-CHHHHHH
Confidence 579999999999999999999999999999997743100 0 0 1366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...+ +. +.+.+.+...+ +..+ +.+|.||+|+| ..|+.
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~~v~~~~~~~~--~~~~-i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS--DGKIDVSIEAASGG--KAEV-ITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT--TSCEEEEEEETTSC--CCEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC--CceEEEEEEecCCC--CceE-EEcCEEEECcC--CCcCC
Confidence 888888888776 9999999998765 33 56664321000 1167 99999999999 44443
No 183
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.75 E-value=8.5e-08 Score=83.03 Aligned_cols=103 Identities=17% Similarity=0.160 Sum_probs=79.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. . -..++.+
T Consensus 170 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~ 216 (464)
T 2a8x_A 170 LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP----------------------N-----------EDADVSK 216 (464)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T-----------SCHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc----------------------c-----------cCHHHHH
Confidence 357999999999999999999999999999999764310 0 0136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEc-ccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
++.+.+++.++.+ +.+++|+++...+ +...+.+. ++ +..+ +.+|.||+|+| ..|+.
T Consensus 217 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g-----~~~~-~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 217 EIEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDG-----VAQE-LKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp HHHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSS-----CEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCC-----ceEE-EEcCEEEECCC--CCccC
Confidence 8888888888776 9999999998765 44556654 22 2267 89999999999 44544
No 184
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.75 E-value=7.4e-09 Score=90.57 Aligned_cols=45 Identities=24% Similarity=0.504 Sum_probs=38.2
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhh-CCCCeEEEeccCCCCcc
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCYASI 45 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie~~~~~g~~ 45 (255)
|+.+...+||+|||||++||+||+.|++ .|++|+|+|+.+.+||.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 4444446899999999999999999997 59999999999999983
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.74 E-value=4.4e-08 Score=83.49 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=77.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.... ...++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--------------------------------LGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH--------------------------------HCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh--------------------------------cCHHHHHH
Confidence 5799999999999999999999999999999977431100 01366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.|+.+ +++++|+++...+ ....|.+.++ .+ +.+|.||+|+|.
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg-------~~-i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG-------RS-FVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC-------CE-EEcCEEEEeeCC
Confidence 888888888876 8999999998654 4556777664 67 999999999994
No 186
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.74 E-value=1.5e-07 Score=86.12 Aligned_cols=38 Identities=34% Similarity=0.476 Sum_probs=35.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 57999999999999999999999999999999887776
No 187
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.73 E-value=1.2e-07 Score=81.89 Aligned_cols=102 Identities=14% Similarity=0.158 Sum_probs=79.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ... ..++.+
T Consensus 146 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~~-d~~~~~ 193 (452)
T 3oc4_A 146 NSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------KYF-DKEMVA 193 (452)
T ss_dssp TCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------TTC-CHHHHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------ccC-CHHHHH
Confidence 357999999999999999999999999999999774310 000 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
.+.+.+++.++.+ +.+++|+++...+ +.+.|.+.+ .+ +.+|.||+|+| ..|+..
T Consensus 194 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~--------g~-i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 194 EVQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE--------QE-ISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp HHHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS--------CE-EEESEEEECSC--CBCCCS
T ss_pred HHHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC--------CE-EEeCEEEECcC--CCCChH
Confidence 8888888888776 9999999998655 455666643 46 89999999999 445443
No 188
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.73 E-value=5.8e-08 Score=84.18 Aligned_cols=106 Identities=13% Similarity=0.185 Sum_probs=79.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|.+.|.+|+++++.+.+... ...++.+
T Consensus 176 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~---------------------------------~~~~~~~ 222 (470)
T 1dxl_A 176 IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT---------------------------------MDAEIRK 222 (470)
T ss_dssp CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------------------------------SCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc---------------------------------ccHHHHH
Confidence 3579999999999999999999999999999997743100 0136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ +...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 223 ~l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~~ 281 (470)
T 1dxl_A 223 QFQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGG--EQTI-IEADVVLVSAG--RTPFT 281 (470)
T ss_dssp HHHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSC--CCEE-EEESEEECCCC--EEECC
T ss_pred HHHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCC--cceE-EECCEEEECCC--CCcCC
Confidence 8888888888877 9999999998654 4466665421111 2267 89999999999 44443
No 189
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.73 E-value=3.6e-08 Score=85.84 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=78.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||||+.|+.+|..|++.|.+|+++|+.+.+.. . ...++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ----------------------G-----------ADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST----------------------T-----------SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc----------------------c-----------cCHHHHHH
Confidence 67999999999999999999999999999999774310 0 01366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcc-cCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN-LLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...+ +...|.+.+ ...+ .+ +.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~~g----~~-~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGANAPK----EP-QRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSSCCS----SC-EEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccCCCc----eE-EEcCEEEECcC--CCcCC
Confidence 888888888766 9999999998765 456666654 1111 56 88999999999 44543
No 190
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.73 E-value=1.1e-07 Score=82.32 Aligned_cols=105 Identities=14% Similarity=0.170 Sum_probs=78.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... -..++.+
T Consensus 173 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~~~ 219 (468)
T 2qae_A 173 VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT---------------------------------LDEDVTN 219 (468)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------------------------SCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc---------------------------------CCHHHHH
Confidence 3579999999999999999999999999999997643100 0136677
Q ss_pred HHHHHH-HhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYV-SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~-~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+ ++.++.+ +.+++|+++...+ +.+.+.+... ++ +..+ +.+|.||+|+| ..|+.
T Consensus 220 ~l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~-~g--~~~~-i~~D~vv~a~G--~~p~~ 278 (468)
T 2qae_A 220 ALVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGK-NG--KRET-VTCEALLVSVG--RRPFT 278 (468)
T ss_dssp HHHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC------EEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcC-CC--ceEE-EECCEEEECCC--cccCC
Confidence 888888 8888776 9999999998765 4566665421 01 2257 89999999999 44443
No 191
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.73 E-value=1.1e-07 Score=81.01 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=77.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~-------------------------------~-~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA-------------------------------R-VAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh-------------------------------h-hcCHHHHHH
Confidence 57999999999999999999999999999999774310 0 011477788
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.|+.+ +++++|+++...+ .....|.+.++ .+ +.+|.||+|+|.
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG-------~~-i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG-------SV-IPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS-------CE-EECSEEEECSCC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECCCC
Confidence 888888888877 9999999998754 12335777654 67 999999999994
No 192
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.72 E-value=9.2e-08 Score=82.86 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=76.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+- + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 5799999999999999999999999999999876431 0 01367778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.|+.+ +.+++|+++...+ +.+.|.+.+ .+ +.+|.||+|+|.
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------~~-i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH--------GE-LRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT--------EE-EEESEEEECSCE
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC--------cE-EEcCEEEECCCC
Confidence 888888888776 9999999998765 556666653 67 899999999994
No 193
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.72 E-value=1.1e-07 Score=82.18 Aligned_cols=171 Identities=13% Similarity=0.139 Sum_probs=88.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccCCCCccc----ccCCCCCeEEecccccccCCCC------C-CCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIW----KKYSYDRLRLHLAKQFCQLPHL------P-FPS 72 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~------~-~~~ 72 (255)
..++|+|||+|.+|+.+|..|.+. +.+|+++++.+.+--.. ....+.. .....+..++.. . ...
T Consensus 226 ~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p---~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 226 KPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAP---KFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSH---HHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccCh---hHHHHHhcCCHHHHHHHHHHhhc
Confidence 367999999999999999999998 88999999977431100 0000000 000000000000 0 000
Q ss_pred -CCCCCCCHHH---HHH-HHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 025254 73 -SYPMFVSRAQ---FIE-HLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (255)
Q Consensus 73 -~~~~~~~~~~---~~~-~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG 146 (255)
.+. -.+... +.+ .+.+.+.. .++ .++.+++|+++...+ +.+.|.+.+..++ +..+ +.+|.||+|||
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~~--~~~~v~~~~~~~g--~~~~-~~~D~Vv~AtG 374 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATATA--QGIELALRDAGSG--ELSV-ETYDAVILATG 374 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESEEEECCC
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEecC--CEEEEEEEEcCCC--CeEE-EECCEEEEeeC
Confidence 000 011111 111 11111111 344 459999999998876 6788888754333 4467 89999999999
Q ss_pred CCCCCC--CCCCCCccccccCCCCCCcEEecccCCCCC-CCCCCeEEEEcCC
Q 025254 147 ETTNPF--TPDIRGLCSFCSSATGTGEVIHSTQYKNGK-PYGGKNVLVVGSG 195 (255)
Q Consensus 147 ~~s~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~ViG~g 195 (255)
..|. .+.+.+.... .+.+.....+.... .....+|.++|..
T Consensus 375 --~~p~~~~~~l~~l~~~------~g~i~v~~~~~~~~~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 375 --YERQLHRQLLEPLAEY------LGDHEIGRDYRLQTDERCKVAIYAQGFS 418 (463)
T ss_dssp --EECCC-CTTTGGGGGG------BC--CCCTTSBCCBCTTBCSEEEESSCC
T ss_pred --CCCCCccchhHHHHHH------hCCcccCcccccccCCCCCCeEEEcCCC
Confidence 4444 2333333222 13333444443221 1123568888864
No 194
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.71 E-value=6.5e-08 Score=84.13 Aligned_cols=96 Identities=18% Similarity=0.255 Sum_probs=75.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... . ..++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~-~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI--------------------------------Y-DGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS--------------------------------S-CHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc--------------------------------C-CHHHHH
Confidence 4689999999999999999999999999999987643210 0 136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++...+ ....+.+.+ .+ +.+|.||+|+|.
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~D~vi~a~G~ 280 (480)
T 3cgb_A 232 YIYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK--------GT-YKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT--------EE-EECSEEEECSCE
T ss_pred HHHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC--------CE-EEcCEEEECcCC
Confidence 8888888888776 8999999998643 333455432 67 999999999994
No 195
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.71 E-value=5.6e-08 Score=81.58 Aligned_cols=43 Identities=28% Similarity=0.370 Sum_probs=39.4
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEecc-CCCCcccc
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-NCYASIWK 47 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~-~~~g~~~~ 47 (255)
..++||+|||||++|+++|..|.+.|++|+|+|+. ..+||.+.
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~ 85 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIK 85 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCcee
Confidence 34689999999999999999999999999999999 88998655
No 196
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=2e-07 Score=81.48 Aligned_cols=102 Identities=16% Similarity=0.103 Sum_probs=78.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||||+.|+.+|..|++.|.+|+++++.+.+.. . . ..++.+.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------~----------~-d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR----------------------K----------F-DESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT----------------------T----------S-CHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc----------------------c----------c-chhhHHH
Confidence 57999999999999999999999999999999764310 0 0 1366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.+++|+++...++ +...|.+.++ + .. +.+|.||+|+| ..|+.
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~~-~~~~v~~~~g-----~-~~-~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVSD-KNLSIHLSDG-----R-IY-EHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESST-TCEEEEETTS-----C-EE-EEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcCC-ceEEEEECCC-----c-EE-EECCEEEECCC--CCcCC
Confidence 888888888876 99999999987541 3366776543 2 36 89999999999 44544
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.71 E-value=1.1e-07 Score=82.99 Aligned_cols=97 Identities=12% Similarity=0.134 Sum_probs=77.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . -..++.+
T Consensus 181 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~ 227 (499)
T 1xdi_A 181 LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-------------------------------Y--EDADAAL 227 (499)
T ss_dssp CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-------------------------------C--SSHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------------------c--cCHHHHH
Confidence 357999999999999999999999999999998774310 0 0136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.|+.+ +.+++|+++...+ +.+.+...++ .+ +.+|.||+|+|.
T Consensus 228 ~l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G~ 277 (499)
T 1xdi_A 228 VLEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG-------RT-VEGSHALMTIGS 277 (499)
T ss_dssp HHHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCCE
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC-------cE-EEcCEEEECCCC
Confidence 8888888888876 9999999998765 4566665443 67 899999999994
No 198
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.70 E-value=1.2e-07 Score=80.81 Aligned_cols=93 Identities=20% Similarity=0.313 Sum_probs=74.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR--------------------------------AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------------------------ccCHHHHHH
Confidence 589999999999999999999999999999998743100 001366778
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.+++|+++. + + .|.+.++ .+ +.+|.||+|+|.
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~--~--~--~v~~~~g-------~~-i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV--D--G--VVLLDDG-------TR-IAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE--T--T--EEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE--C--C--EEEECCC-------CE-EEcCEEEECcCC
Confidence 888888888876 9999999998 3 3 5666553 67 899999999994
No 199
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.70 E-value=1.7e-07 Score=81.74 Aligned_cols=105 Identities=15% Similarity=0.106 Sum_probs=77.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ...++.+
T Consensus 173 ~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~~~ 219 (492)
T 3ic9_A 173 LPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL---------------------------------QDEEMKR 219 (492)
T ss_dssp CCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC---------------------------------CCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------------------------------CCHHHHH
Confidence 3689999999999999999999999999999998753210 0136667
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
.+.+.+++. +.+ +.+++|+++...+ +...+.+.+.+ + ++.+ +.+|.||+|+| ..|+..
T Consensus 220 ~l~~~l~~~-V~i--~~~~~v~~i~~~~--~~v~v~~~~~~-G--~~~~-i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 220 YAEKTFNEE-FYF--DAKARVISTIEKE--DAVEVIYFDKS-G--QKTT-ESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHHTT-SEE--ETTCEEEEEEECS--SSEEEEEECTT-C--CEEE-EEESEEEECSC--CEESCS
T ss_pred HHHHHHhhC-cEE--EECCEEEEEEEcC--CEEEEEEEeCC-C--ceEE-EECCEEEEeeC--CccCCC
Confidence 777766664 544 9999999998866 56666664211 1 3367 89999999999 455443
No 200
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.69 E-value=1.8e-07 Score=81.26 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=80.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+
T Consensus 179 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~~~~~~~ 225 (476)
T 3lad_A 179 VPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP----------------------A-----------VDEQVAK 225 (476)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST----------------------T-----------SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc----------------------c-----------cCHHHHH
Confidence 467999999999999999999999999999999774310 0 0136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ +...+.+.+.. .... +.+|.||+|+| ..|+.
T Consensus 226 ~l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~----g~~~-~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 226 EAQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAE----GEKS-QAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp HHHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSS----EEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCC----CcEE-EECCEEEEeeC--CcccC
Confidence 8888888888776 9999999998865 56666665432 1257 89999999999 44544
No 201
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.69 E-value=1.2e-07 Score=82.75 Aligned_cols=102 Identities=14% Similarity=0.098 Sum_probs=79.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC---CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~---g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (255)
.+.+++|||+|+.|+.+|..|.+. |.+|+++++.+.+... . ..+
T Consensus 186 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~--------------------------------~-d~~ 232 (490)
T 1fec_A 186 APKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG--------------------------------F-DSE 232 (490)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT--------------------------------S-CHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc--------------------------------c-CHH
Confidence 357999999999999999999999 9999999998743100 0 136
Q ss_pred HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 83 ~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+.+.+++.++.+ +++++|+++...+ .+...|.+.++ .+ +.+|.||+|+| ..|+.
T Consensus 233 ~~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 233 LRKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG-------AE-ADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC-------cE-EEcCEEEEccC--CCcCc
Confidence 6778888888888776 9999999998754 13466777653 57 99999999999 44544
No 202
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.69 E-value=1.4e-07 Score=82.93 Aligned_cols=96 Identities=14% Similarity=0.110 Sum_probs=76.4
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHHH
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 87 (255)
++++|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ...++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-------------------------------I--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------------------------------C--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-------------------------------c--ccHHHHHHH
Confidence 8999999999999999999999999999999774310 0 013677888
Q ss_pred HHHHHhcCCCCeeEeccEEEEEEEcCCCCc---EEEEEcccCCCCceee-EEEeeCEEEEeecC
Q 025254 88 DHYVSHFNIGPSIRYQRSVESASYDEATNM---WNVKASNLLSPGREIE-EYYSGRFLVVASGE 147 (255)
Q Consensus 88 ~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~---~~v~~~~~~~~~~~~~-~~i~~d~vViAtG~ 147 (255)
.+.+++.|+.+ +.+++|+++...++ +. +.|.+.++ . + +.+|.||+|+|.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~~-~~v~~~~v~~~~G-------~~~-i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDAN-GRVQAVVAMTPNG-------EMR-IETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECTT-SBEEEEEEEETTE-------EEE-EECSCEEECCCC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcCC-CceEEEEEEECCC-------cEE-EEcCEEEECcCC
Confidence 88888888876 99999999987541 22 56666543 4 7 999999999994
No 203
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.68 E-value=1.3e-07 Score=82.51 Aligned_cols=102 Identities=15% Similarity=0.094 Sum_probs=79.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC---CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~---g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (255)
.+.+++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. . . ..+
T Consensus 190 ~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~----------------------~----------~-d~~ 236 (495)
T 2wpf_A 190 PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR----------------------G----------F-DET 236 (495)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT----------------------T----------S-CHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc----------------------c----------c-CHH
Confidence 357999999999999999999999 999999999764310 0 0 136
Q ss_pred HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 83 ~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+.+.+++.++.+ +++++|+++...+ .+...|.+.++ .+ +.+|.||+|+| .+|+.
T Consensus 237 ~~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 237 IREEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG-------KT-LDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC-------cE-EEcCEEEECCC--Ccccc
Confidence 6778888888888876 9999999998754 13466777653 57 99999999999 44443
No 204
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.68 E-value=4.6e-07 Score=78.82 Aligned_cols=102 Identities=20% Similarity=0.104 Sum_probs=78.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+.+++|||+|+.|+.+|..|++.|.+|+++++...+. .+ ..++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~-----------------------~~-----------d~~~~~ 231 (483)
T 3dgh_A 186 EPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR-----------------------GF-----------DQQMAE 231 (483)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST-----------------------TS-----------CHHHHH
T ss_pred cCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc-----------------------cc-----------CHHHHH
Confidence 35799999999999999999999999999998843110 00 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++...+ ++...|.+.++.++ +..+ +.+|.||+|+|.
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~--~~~~-~~~D~vi~a~G~ 287 (483)
T 3dgh_A 232 LVAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVETG--EESE-DVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTTC--CEEE-EEESEEEECSCE
T ss_pred HHHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCCC--ceeE-EEcCEEEECccc
Confidence 8888888888887 9999999998754 23466776664322 3357 899999999994
No 205
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.67 E-value=3e-07 Score=79.87 Aligned_cols=110 Identities=13% Similarity=-0.028 Sum_probs=79.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+
T Consensus 186 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------~-----------~d~~~~~ 232 (478)
T 3dk9_A 186 LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR----------------------S-----------FDSMIST 232 (478)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT----------------------T-----------SCHHHHH
T ss_pred cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc----------------------c-----------cCHHHHH
Confidence 357999999999999999999999999999998764310 0 0136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...++.....+.+.+..++..+... +.+|.||+|+| ..|+.
T Consensus 233 ~~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~-~~~D~vi~a~G--~~p~~ 295 (478)
T 3dk9_A 233 NCTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMI-PDVDCLLWAIG--RVPNT 295 (478)
T ss_dssp HHHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCCCcccceE-EEcCEEEEeec--cccCC
Confidence 8888888888776 9999999998765211355666543221000157 89999999999 44444
No 206
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.67 E-value=1.6e-07 Score=79.86 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=77.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~--------------------------------~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR--------------------------------VVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh--------------------------------ccCHHHHHH
Confidence 579999999999999999999999999999987643100 011467788
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.+++|+++...+ .....|.+.++ .+ +.+|.||+|+|.
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG-------~~-i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG-------NT-LPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS-------CE-EECSEEEECCCE
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECcCC
Confidence 888888888877 9999999998764 12334666654 67 999999999994
No 207
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.67 E-value=1e-07 Score=83.16 Aligned_cols=101 Identities=16% Similarity=0.256 Sum_probs=76.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .. ..++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~~-~~~~~~ 240 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-------------------------------YY-DRDLTD 240 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------TS-CHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-------------------------------HH-HHHHHH
Confidence 4689999999999999999999999999999997743100 00 136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ ....+.+ ++ .+ +.+|.||+|+| .+|+.
T Consensus 241 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~v~~v~~-~g-------~~-i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 241 LMAKNMEEHGIQL--AFGETVKEVAGNG--KVEKIIT-DK-------NE-YDVDMVILAVG--FRPNT 293 (490)
T ss_dssp HHHHHHHTTTCEE--EETCCEEEEECSS--SCCEEEE-SS-------CE-EECSEEEECCC--EEECC
T ss_pred HHHHHHHhCCeEE--EeCCEEEEEEcCC--cEEEEEE-CC-------cE-EECCEEEECCC--CCcCh
Confidence 8888888888776 9999999998522 2223444 22 67 89999999999 44443
No 208
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.67 E-value=2.1e-07 Score=79.80 Aligned_cols=99 Identities=15% Similarity=0.197 Sum_probs=76.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ....++.+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~ 195 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-------------------------------R-VTAPPVSA 195 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------T-TSCHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c-hhhHHHHH
Confidence 367999999999999999999999999999998764310 0 01136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEE--cCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASY--DEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~--~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.|+.+ +.+++|+++.. .+ .....|.+.++ .+ +.+|.||+|+|.
T Consensus 196 ~l~~~l~~~GV~i--~~~~~v~~i~~~~~~-~~v~~v~~~~G-------~~-i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 196 FYEHLHREAGVDI--RTGTQVCGFEMSTDQ-QKVTAVLCEDG-------TR-LPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHHTCEE--ECSCCEEEEEECTTT-CCEEEEEETTS-------CE-EECSEEEECCCE
T ss_pred HHHHHHHhCCeEE--EeCCEEEEEEeccCC-CcEEEEEeCCC-------CE-EEcCEEEECCCC
Confidence 7888888888876 99999999986 33 12335666553 67 899999999994
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.67 E-value=1.6e-07 Score=81.68 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=78.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||||+.|+.+|..|.+.|.+|+++++.+.+.. . . ..++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~-d~~~~~ 230 (479)
T 2hqm_A 184 QPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------------------------------K-F-DECIQN 230 (479)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T-S-CHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------------------------------c-c-CHHHHH
Confidence 357999999999999999999999999999999764310 0 0 136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.|+.+ +++++|+++...++.....|.+.++ + .+ +.+|.||+|+| .+|+.
T Consensus 231 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G-----~-~~-i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 231 TITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS-----K-SI-DDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS-----C-EE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC-----c-EE-EEcCEEEECCC--CCCcc
Confidence 7888888888876 9999999998754211356766542 1 46 89999999999 44443
No 210
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.67 E-value=2.1e-08 Score=86.66 Aligned_cols=46 Identities=15% Similarity=0.289 Sum_probs=39.9
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccc
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~ 46 (255)
|+.+...+||+|||||++|+++|..|++.|++|+++|+++.+||.+
T Consensus 5 ~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp --CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred hhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 3344456899999999999999999999999999999999999843
No 211
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.67 E-value=1.6e-07 Score=81.70 Aligned_cols=97 Identities=19% Similarity=0.255 Sum_probs=78.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . . ..++.+
T Consensus 190 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~----------------------~----------~-~~~~~~ 236 (484)
T 3o0h_A 190 LPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR----------------------N----------F-DYDLRQ 236 (484)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T----------S-CHHHHH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc----------------------c----------c-CHHHHH
Confidence 367999999999999999999999999999998764310 0 0 136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++...+ +.+.|.+.++ .+ +.+|.||+|+|.
T Consensus 237 ~l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 237 LLNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG-------QT-ICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCCE
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC-------cE-EEcCEEEEeeCC
Confidence 7888888888876 9999999998865 5667777664 57 899999999994
No 212
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=4.8e-07 Score=78.83 Aligned_cols=106 Identities=15% Similarity=0.027 Sum_probs=79.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+.+++|||+|+.|+.+|..|++.|.+|+++++...+. .+ ..++.+
T Consensus 184 ~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~-----------------------~~-----------d~~~~~ 229 (488)
T 3dgz_A 184 SPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR-----------------------GF-----------DQQMSS 229 (488)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------------------TS-----------CHHHHH
T ss_pred cCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc-----------------------cC-----------CHHHHH
Confidence 35689999999999999999999999999998854211 00 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.++++.++...+ .+...+.+.+..++ +..+ +.+|.||+|+| -.|+.
T Consensus 230 ~l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 230 LVTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHASG--KEDT-GTFDTVLWAIG--RVPET 289 (488)
T ss_dssp HHHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTTT--EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCCC--eeEE-EECCEEEEccc--CCccc
Confidence 8888888888876 9999999998754 24566666553322 3357 89999999999 44443
No 213
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.66 E-value=2e-07 Score=80.89 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=77.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. ... ..++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~-------------------------------~~~-~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP-------------------------------GFT-SKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST-------------------------------TTS-CHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc-------------------------------ccc-CHHHHH
Confidence 57999999999999999999999 999999998764310 000 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++...+ +...+.+.++ .+ +.+|.||+|+|.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK-------RT-LDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC-------CE-EEcCEEEECCCC
Confidence 8888888888876 9999999998755 5666776554 57 999999999994
No 214
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.66 E-value=1.6e-07 Score=80.96 Aligned_cols=101 Identities=13% Similarity=0.146 Sum_probs=76.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ... ..++.+
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~~-~~~~~~ 195 (452)
T 2cdu_A 148 KAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-------------------------------KYF-DKEFTD 195 (452)
T ss_dssp GCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-------------------------------TTS-CHHHHH
T ss_pred cCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-------------------------------hhh-hhhHHH
Confidence 357999999999999999999999999999999764310 000 136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEE-EEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++|+++...+ +... +.. ++ .+ +.+|.||+|+| ..|+.
T Consensus 196 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~-~g-------~~-i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 196 ILAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTL-DG-------KE-IKSDIAILCIG--FRPNT 249 (452)
T ss_dssp HHHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEET-TS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEe-CC-------CE-EECCEEEECcC--CCCCH
Confidence 8888888888877 9999999998644 4433 333 22 67 89999999999 44443
No 215
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.66 E-value=1.4e-07 Score=81.01 Aligned_cols=95 Identities=15% Similarity=0.177 Sum_probs=73.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+.+++|||||+.|+.+|..+.+.|.+|+++++.+.+.... ..++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~~---------------------------------d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKLM---------------------------------DADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTTS---------------------------------CGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccccc---------------------------------cchhHHH
Confidence 5799999999999999999999999999999977542110 0244567
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~ 152 (255)
+.+.+++.++.+ +.+++|++++.. .+.+.++ .+ +.+|.|++|+| ..|+
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~------~v~~~~g-------~~-~~~D~vl~a~G--~~Pn 241 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGN------EITFKSG-------KV-EHYDMIIEGVG--THPN 241 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETT------EEEETTS-------CE-EECSEEEECCC--EEES
T ss_pred HHHHhhccceEE--EeccEEEEecCC------eeeecCC-------eE-EeeeeEEEEec--eecC
Confidence 777788888877 999999887532 2666654 67 89999999999 4454
No 216
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.65 E-value=2.1e-08 Score=85.24 Aligned_cols=47 Identities=26% Similarity=0.319 Sum_probs=40.3
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccCCCCcccc
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWK 47 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~~~g~~~~ 47 (255)
|.+|...+||+|||||++|+++|..|++. |.+|+|+|+.+.+||.+.
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~ 48 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAY 48 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGC
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeee
Confidence 66665678999999999999999999998 999999999999998554
No 217
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.65 E-value=2.7e-07 Score=81.81 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=76.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT---------------------------------PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch---------------------------------hcCHHHHHH
Confidence 57999999999999999999999999999999764310 001366777
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcC-----------------CCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.+++|+++.... ..+...+...++ .+ +.+|.||+|+|.
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-------~~-i~~D~vi~a~G~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-------EL-LETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS-------CE-EEESEEEECSCE
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC-------CE-EEcCEEEECcCC
Confidence 888888888876 9999999998731 124556666443 57 999999999994
No 218
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.64 E-value=3.4e-07 Score=74.97 Aligned_cols=101 Identities=22% Similarity=0.259 Sum_probs=74.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
...+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+.+
T Consensus 144 ~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~ 188 (320)
T 1trb_A 144 RNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIK 188 (320)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHH
Confidence 35799999999999999999999999999998876321 0124556
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCC-CCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS-PGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~-~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +++++|+++...+ +....|.+.+..+ + +..+ +.+|.||+|+|.
T Consensus 189 ~l~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~~g--~~~~-i~~D~vv~a~G~ 245 (320)
T 1trb_A 189 RLMDKVENGNIIL--HTNRTLEEVTGDQ-MGVTGVRLRDTQNSD--NIES-LDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHTSSEEE--ECSCEEEEEEECS-SSEEEEEEECCTTCC--CCEE-EECSEEEECSCE
T ss_pred HHHHhcccCCeEE--EcCceeEEEEcCC-CceEEEEEEeccCCC--ceEE-EEcCEEEEEeCC
Confidence 6666677778766 9999999998754 1223355544211 1 2267 999999999994
No 219
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.61 E-value=2.9e-08 Score=86.65 Aligned_cols=37 Identities=32% Similarity=0.468 Sum_probs=31.4
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
++|+|||||++||+||..|++.|++|+|+|+.+.+||
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 6899999999999999999999999999999999988
No 220
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.61 E-value=4.5e-07 Score=74.76 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
..+|+|||+|..|+.+|..|.+.+.+|+++++.+.+. ......+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 5799999999999999999999999999999876321 01244566
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.++++.++...+ +...|.+....++ +..+ +.+|.||+|+|.
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 250 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQTQ--EELA-LEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCCC--ceEE-EecCEEEEeecC
Confidence 667777777766 9999999998743 4334555422111 3367 899999999994
No 221
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.58 E-value=7.1e-08 Score=82.37 Aligned_cols=45 Identities=29% Similarity=0.453 Sum_probs=38.8
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccCCCCccc
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIW 46 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~~~g~~~ 46 (255)
|+. ..++||+|||||++|+++|..|++.| .+|+|+|+.+.+||..
T Consensus 1 M~~-~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~ 46 (424)
T 2b9w_A 1 MSI-SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKC 46 (424)
T ss_dssp -CC-CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTC
T ss_pred CCC-CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcc
Confidence 642 34689999999999999999999999 8999999999888743
No 222
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.55 E-value=9.7e-07 Score=77.50 Aligned_cols=107 Identities=19% Similarity=0.109 Sum_probs=76.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+.+++|||+|+.|+.+|..|.+.|.+|+++++...+. .+ ..++.+
T Consensus 209 ~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~-----------------------~~-----------d~~~~~ 254 (519)
T 3qfa_A 209 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR-----------------------GF-----------DQDMAN 254 (519)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-----------------------TS-----------CHHHHH
T ss_pred cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc-----------------------cC-----------CHHHHH
Confidence 35689999999999999999999999999998843110 00 136777
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCC--CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+.+.+++.++.+ +.+++++++...++ .+...+.......+ +... +.+|.|++|+| ..|+.
T Consensus 255 ~~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~--~~~~-~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 255 KIGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNSE--EIIE-GEYNTVMLAIG--RDACT 317 (519)
T ss_dssp HHHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSSS--CEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCCc--EEEE-EECCEEEEecC--CcccC
Confidence 8888888888876 89988888876432 13444554332211 2246 78999999999 44543
No 223
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.54 E-value=6e-07 Score=78.29 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=74.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhh----CCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~----~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (255)
.++|+|||||+.|+.+|..|.+ .|.+|+++++.+.... ...+ .+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~-------------------------------~~l~-~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG-------------------------------KILP-EY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT-------------------------------TTSC-HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc-------------------------------ccCC-HH
Confidence 5799999999999999999986 4788999987653210 0011 36
Q ss_pred HHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 83 ~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+.+.+++.++.+ +.+++|+++...+ +...|.+.++ .+ +.+|.||+|+|.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG-------~~-i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG-------RK-VETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCCE
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC-------CE-EECCEEEECCCC
Confidence 6777888888888776 9999999998754 4556776654 67 999999999994
No 224
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.54 E-value=2e-07 Score=78.20 Aligned_cols=93 Identities=17% Similarity=0.237 Sum_probs=73.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+.. -..++.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------~~~~~~~~ 188 (367)
T 1xhc_A 143 SGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----------------------------------LDEELSNM 188 (367)
T ss_dssp HSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----------------------------------CCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----------------------------------CCHHHHHH
Confidence 37999999999999999999999999999999774310 01367788
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~ 152 (255)
+.+.+++.++.+ +.+++|+++. . . .|.+.+ .+ +.+|.||+|+| ..|+
T Consensus 189 l~~~l~~~gV~i--~~~~~v~~i~--~--~--~v~~~~--------g~-i~~D~vi~a~G--~~p~ 235 (367)
T 1xhc_A 189 IKDMLEETGVKF--FLNSELLEAN--E--E--GVLTNS--------GF-IEGKVKICAIG--IVPN 235 (367)
T ss_dssp HHHHHHHTTEEE--ECSCCEEEEC--S--S--EEEETT--------EE-EECSCEEEECC--EEEC
T ss_pred HHHHHHHCCCEE--EcCCEEEEEE--e--e--EEEECC--------CE-EEcCEEEECcC--CCcC
Confidence 888888888776 9999999886 2 2 255554 45 89999999999 4444
No 225
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.50 E-value=8.5e-07 Score=76.71 Aligned_cols=97 Identities=13% Similarity=0.115 Sum_probs=76.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . . ..++.+
T Consensus 169 ~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~----------------------~----------~-~~~~~~ 215 (463)
T 4dna_A 169 LPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS----------------------R----------F-DQDMRR 215 (463)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST----------------------T----------S-CHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc----------------------c----------c-CHHHHH
Confidence 367999999999999999999999999999998764310 0 0 136778
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEE-EcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++...+ ++...|. +.+ .+ +.+|.||+|+|.
T Consensus 216 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~--------g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 216 GLHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKH--------GE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSS--------CE-EEESEEEECSCE
T ss_pred HHHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCC--------Ce-EEeCEEEEeeCc
Confidence 8888888888877 9999999998865 2335666 544 45 889999999994
No 226
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.48 E-value=1.3e-06 Score=72.78 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=70.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
..+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+.. ...+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------------------------~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------------------------------HGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------------------------------CSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------------------------------CHHHHHH
Confidence 57999999999999999999999999999998764210 0133455
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCc-EEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+..++.++.+ +.+++|+++...+ +. ..|.+.. .++ ++.. +.+|.||+|+|.
T Consensus 208 l~~~~~~~gv~i--~~~~~v~~i~~~~--~~v~~v~~~~-~~g--~~~~-i~~D~vi~a~G~ 261 (360)
T 3ab1_A 208 VERARANGTIDV--YLETEVASIEESN--GVLTRVHLRS-SDG--SKWT-VEADRLLILIGF 261 (360)
T ss_dssp SHHHHHHTSEEE--ESSEEEEEEEEET--TEEEEEEEEE-TTC--CEEE-EECSEEEECCCB
T ss_pred HHHHhhcCceEE--EcCcCHHHhccCC--CceEEEEEEe-cCC--CeEE-EeCCEEEECCCC
Confidence 555566667665 9999999998764 32 2455431 111 3367 899999999994
No 227
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.48 E-value=9.1e-07 Score=78.84 Aligned_cols=95 Identities=13% Similarity=0.171 Sum_probs=75.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+
T Consensus 186 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~ 232 (588)
T 3ics_A 186 KPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-------------------------------P--IDYEMAA 232 (588)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T--SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc-------------------------------c--CCHHHHH
Confidence 368999999999999999999999999999998764310 0 0136677
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++.++.+ +.+++|+++.... + .|.+.++ .+ +.+|.||+|+|.
T Consensus 233 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~--~v~~~~g-------~~-i~~D~Vi~a~G~ 280 (588)
T 3ics_A 233 YVHEHMKNHDVEL--VFEDGVDALEENG--A--VVRLKSG-------SV-IQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEGGG--T--EEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHHcCCEE--EECCeEEEEecCC--C--EEEECCC-------CE-EEcCEEEEccCC
Confidence 8888888888776 9999999997654 3 3555543 67 899999999994
No 228
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.47 E-value=9.6e-07 Score=76.07 Aligned_cols=96 Identities=17% Similarity=0.257 Sum_probs=70.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... .. ..++.+
T Consensus 147 ~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~~-~~~~~~ 194 (449)
T 3kd9_A 147 KVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR-------------------------------SF-DKEVTD 194 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------TS-CHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------------------hc-CHHHHH
Confidence 3579999999999999999999999999999997743110 00 136667
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+++. +.+ +.+++|.++...+ ....+.. ++ .+ +.+|.||+|+|.
T Consensus 195 ~l~~~l~~~-v~i--~~~~~v~~i~~~~--~v~~v~~-~g-------~~-i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 195 ILEEKLKKH-VNL--RLQEITMKIEGEE--RVEKVVT-DA-------GE-YKAELVILATGI 242 (449)
T ss_dssp HHHHHHTTT-SEE--EESCCEEEEECSS--SCCEEEE-TT-------EE-EECSEEEECSCE
T ss_pred HHHHHHHhC-cEE--EeCCeEEEEeccC--cEEEEEe-CC-------CE-EECCEEEEeeCC
Confidence 777777665 554 8999999987543 2222333 22 67 999999999994
No 229
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.47 E-value=7.7e-07 Score=72.53 Aligned_cols=95 Identities=18% Similarity=0.149 Sum_probs=67.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .+ ..
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC----------------------------------cc-----HH
Confidence 5799999999999999999999999999998876321 00 12
Q ss_pred HHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+.+ .++.+ +.+++++++...+ +.. .|.+.+..++ ++.+ +.+|.||+|+|.
T Consensus 185 ~~~~l~~~~gv~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 240 (310)
T 1fl2_A 185 LQDKLRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVSG--DIHN-IELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHTCTTEEE--ESSEEEEEEEESS--SSEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred HHHHHhhCCCeEE--ecCCceEEEEcCC--CcEEEEEEEECCCC--cEEE-EEcCEEEEeeCC
Confidence 2333444 46555 8999999998754 332 4555543222 3367 899999999993
No 230
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.45 E-value=2.2e-07 Score=78.60 Aligned_cols=43 Identities=23% Similarity=0.309 Sum_probs=39.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~ 48 (255)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+||.+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 3579999999999999999999999999999999999986653
No 231
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.45 E-value=2.2e-06 Score=70.50 Aligned_cols=97 Identities=16% Similarity=0.130 Sum_probs=70.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|+.|+.+|..|.+.+.+|+++++.+.+.. .+
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~---------------------------------------~~ 212 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA---------------------------------------ST 212 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS---------------------------------------CH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC---------------------------------------CH
Confidence 357999999999999999999999999999998764310 12
Q ss_pred HHHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+.+ .++.+ +.+++++++...+ .....|.+.+..++ +..+ +.+|.||+|+|.
T Consensus 213 ~~~~~l~~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 269 (338)
T 3itj_A 213 IMQKRAEKNEKIEI--LYNTVALEAKGDG-KLLNALRIKNTKKN--EETD-LPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHCTTEEE--ECSEEEEEEEESS-SSEEEEEEEETTTT--EEEE-EECSEEEECSCE
T ss_pred HHHHHHHhcCCeEE--eecceeEEEEccc-CcEEEEEEEECCCC--ceEE-EEeCEEEEEeCC
Confidence 22333333 37665 8999999998765 22334666553222 3377 999999999994
No 232
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.44 E-value=1.9e-07 Score=80.99 Aligned_cols=39 Identities=36% Similarity=0.498 Sum_probs=35.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~ 44 (255)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 468999999999999999999999999999999998887
No 233
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.44 E-value=2.7e-06 Score=69.82 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=70.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
..+++|||+|..|+.+|..|.+.+.+|+++++.+.+.. . ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~----------------------------------~-~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----------------------------------H-EHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS----------------------------------C-HHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc----------------------------------c-HHH---
Confidence 57999999999999999999999999999988764210 0 111
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+++.++.+ +.++++.++...+ +...|.+.+..++ +..+ +.+|.||+|+|.
T Consensus 196 -~~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G~ 248 (332)
T 3lzw_A 196 -VENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKGD--RKEI-LEIDDLIVNYGF 248 (332)
T ss_dssp -HHHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTSC--CEEE-EECSEEEECCCE
T ss_pred -HHHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCCC--ceEE-EECCEEEEeecc
Confidence 12245667766 8999999998765 4555666653332 3377 899999999994
No 234
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.43 E-value=2.2e-07 Score=81.13 Aligned_cols=40 Identities=30% Similarity=0.416 Sum_probs=37.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~ 46 (255)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.+
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 52 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKL 52 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCce
Confidence 4799999999999999999999999999999999998743
No 235
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.43 E-value=1.4e-06 Score=71.58 Aligned_cols=96 Identities=16% Similarity=0.225 Sum_probs=66.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hHH---
Confidence 5799999999999999999999999999999876321 00 111
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.....+..++.+ +.+++++++...+ ....|.+.+..++ ++.+ +.+|.||+|+|.
T Consensus 194 ~~~l~~~~gv~i--~~~~~v~~i~~~~--~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 247 (325)
T 2q7v_A 194 QARAFANPKMKF--IWDTAVEEIQGAD--SVSGVKLRNLKTG--EVSE-LATDGVFIFIGH 247 (325)
T ss_dssp HHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred HHHHHhcCCceE--ecCCceEEEccCC--cEEEEEEEECCCC--cEEE-EEcCEEEEccCC
Confidence 222223346555 8999999998743 3334565532122 2357 899999999993
No 236
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.43 E-value=1.5e-07 Score=82.56 Aligned_cols=40 Identities=28% Similarity=0.422 Sum_probs=37.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccCCCCccc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIW 46 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~~~g~~~ 46 (255)
.+||+|||||++||+||..|.+.| .+|+|+|+.+.+||..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 479999999999999999999999 9999999999999843
No 237
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.41 E-value=4.1e-07 Score=79.15 Aligned_cols=43 Identities=19% Similarity=0.355 Sum_probs=39.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccCCCCccccc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~~~g~~~~~ 48 (255)
..+||+|||||++|+++|..|++.| .+|+|+|+.+.+||.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 4689999999999999999999998 799999999999986654
No 238
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.41 E-value=1.9e-07 Score=81.90 Aligned_cols=39 Identities=31% Similarity=0.461 Sum_probs=36.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 579999999999999999999999999999999988773
No 239
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.41 E-value=2.5e-07 Score=79.62 Aligned_cols=40 Identities=30% Similarity=0.422 Sum_probs=37.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~ 46 (255)
.+||+|||||++|+++|..|++.|++|+|+|+...+||..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 5799999999999999999999999999999999888743
No 240
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.41 E-value=1.7e-06 Score=70.92 Aligned_cols=95 Identities=20% Similarity=0.148 Sum_probs=67.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~----------------------------------~~-~~---- 195 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM----------------------------------CE-NA---- 195 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC----------------------------------SC-HH----
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC----------------------------------CC-HH----
Confidence 4799999999999999999999999999998865321 00 12
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCC-cEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATN-MWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~-~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+.+.++.+ +.+++++++...+ + ...|.+.+..++ +..+ +.+|.||+|+|.
T Consensus 196 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 250 (319)
T 3cty_A 196 YVQEIKKRNIPY--IMNAQVTEIVGDG--KKVTGVKYKDRTTG--EEKL-IETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHTTCCE--ECSEEEEEEEESS--SSEEEEEEEETTTC--CEEE-ECCSEEEECCCE
T ss_pred HHHHHhcCCcEE--EcCCeEEEEecCC--ceEEEEEEEEcCCC--ceEE-EecCEEEEeeCC
Confidence 233344667776 9999999998754 3 234555421112 2357 899999999994
No 241
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.40 E-value=1.5e-06 Score=72.54 Aligned_cols=107 Identities=10% Similarity=0.142 Sum_probs=71.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++|+|||+|.+|+.+|..|.+.|.+|+++++.+.+... .+. +...-...+.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~~d-----~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------DAD-----PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------CCC-----CCccCCHHHHHH
Confidence 469999999999999999999999999999987643100 000 000111355566
Q ss_pred HHHHHHhcC-CCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEE-eeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFN-IGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY-SGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~-l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i-~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.+ +.+ +.+++|.++...+ +...|.+.++ .. + .+|.||+|+| ..|..
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSG-------QS-VHTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSS-------CC-EEESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCC-------eE-eccCCceEEeec--cCCcc
Confidence 677667664 665 8899999997654 5566776554 33 4 4699999999 44544
No 242
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.38 E-value=1.5e-06 Score=70.92 Aligned_cols=98 Identities=17% Similarity=0.161 Sum_probs=66.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 142 ~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~-- 184 (311)
T 2q0l_A 142 KNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR----------------------------------CA-PIT-- 184 (311)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC----------------------------------SC-HHH--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC----------------------------------CC-HHH--
Confidence 35799999999999999999999999999998876321 00 111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.....++.++.+ +.+++++++...+ .....|.+.+..++ ++.+ +.+|.||+|+|.
T Consensus 185 -~~~l~~~~gv~v--~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 239 (311)
T 2q0l_A 185 -LEHAKNNDKIEF--LTPYVVEEIKGDA-SGVSSLSIKNTATN--EKRE-LVVPGFFIFVGY 239 (311)
T ss_dssp -HHHHHTCTTEEE--ETTEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred -HHHHhhCCCeEE--EeCCEEEEEECCC-CcEeEEEEEecCCC--ceEE-EecCEEEEEecC
Confidence 122222346555 8899999998764 12224555432122 2357 899999999993
No 243
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.38 E-value=2.1e-06 Score=70.61 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=67.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++|+|||+|..|+.+|..|.+.+.+|+++++.+.+. .. ..+
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------~~-~~~-- 200 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------------------------AS-KIM-- 200 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-HHH--
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------------------------cc-HHH--
Confidence 35799999999999999999999999999999876421 00 111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
..+..++.++.+ +.+++++++...++.... .|.+.+..++ +..+ +.+|.||+|+|.
T Consensus 201 -~~~~~~~~gv~i--~~~~~v~~i~~~~~~~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 257 (333)
T 1vdc_A 201 -QQRALSNPKIDV--IWNSSVVEAYGDGERDVLGGLKVKNVVTG--DVSD-LKVSGLFFAIGH 257 (333)
T ss_dssp -HHHHHTCTTEEE--ECSEEEEEEEESSSSSSEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred -HHHHHhCCCeeE--ecCCceEEEeCCCCccceeeEEEEecCCC--ceEE-EecCEEEEEeCC
Confidence 123334556655 889999999875411032 3555432122 3367 899999999994
No 244
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.37 E-value=1.2e-06 Score=76.51 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=71.2
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--------------CCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--------------g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (255)
..++|||||+.|+.+|..|++. ..+|+++|..+.+-
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------ 267 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------ 267 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS------------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc------------------------------
Confidence 4799999999999999998753 35799999987542
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+ ..++.+++.+.+++.|+++ +++++|++++.. ...+..... ++...+.+ +.+|.||+|+|.
T Consensus 268 -~~~--~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~----~~~~~~~~~-dg~~~~~~-i~ad~viwa~Gv 330 (502)
T 4g6h_A 268 -NMF--EKKLSSYAQSHLENTSIKV--HLRTAVAKVEEK----QLLAKTKHE-DGKITEET-IPYGTLIWATGN 330 (502)
T ss_dssp -TTS--CHHHHHHHHHHHHHTTCEE--ETTEEEEEECSS----EEEEEEECT-TSCEEEEE-EECSEEEECCCE
T ss_pred -cCC--CHHHHHHHHHHHHhcceee--ecCceEEEEeCC----ceEEEEEec-Ccccceee-eccCEEEEccCC
Confidence 111 1477888889999999877 999999998643 322322211 11112367 999999999994
No 245
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.36 E-value=2.2e-06 Score=70.02 Aligned_cols=97 Identities=21% Similarity=0.204 Sum_probs=69.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
...+++|||+|+.|+.+|..|.+.+.+|+++++.+.+.. . . .
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------------------~-~---~ 194 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------------------------------Q-P---I 194 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------------------------------C-H---H
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------------------------------C-H---H
Confidence 357999999999999999999999999999998764310 0 1 2
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
++.+..+..++.+ +.+++++++...+ ....|.+.+..++ ++.. +.+|.||+|+|.
T Consensus 195 ~~~~~~~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G~ 249 (323)
T 3f8d_A 195 YVETVKKKPNVEF--VLNSVVKEIKGDK--VVKQVVVENLKTG--EIKE-LNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHTCTTEEE--ECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHHHHHhCCCcEE--EeCCEEEEEeccC--ceeEEEEEECCCC--ceEE-EEcCEEEEEECC
Confidence 2333333446655 8999999998764 4455666653222 3357 999999999994
No 246
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.36 E-value=3.8e-07 Score=79.39 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
..+||+|||||++||++|..|.+.|.+|+|+|+.+.+||.
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 4689999999999999999999999999999999988883
No 247
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.34 E-value=3.2e-07 Score=79.47 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=35.2
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCCCCc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYAS 44 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~~g~ 44 (255)
+||+|||||++||++|+.|++.|. +|+|+|+.+.+||
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 699999999999999999999999 9999999888877
No 248
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.34 E-value=2.9e-06 Score=73.41 Aligned_cols=105 Identities=18% Similarity=0.275 Sum_probs=72.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.+++++|||+|+.|+.+|..|.+.|.+|+++++.+.+... +. ..++.+
T Consensus 171 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~~-d~~~~~ 218 (466)
T 3l8k_A 171 LPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT-------------------------------LE-DQDIVN 218 (466)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------------------------------SC-CHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC-------------------------------CC-CHHHHH
Confidence 3579999999999999999999999999999987643100 00 124555
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~~ 154 (255)
.+.+..+ +. ++.+++|+++...+. +...+.+.+. ++ ++.+ +.+|.||+|+| .+|+..
T Consensus 219 ~l~~~l~---v~--i~~~~~v~~i~~~~~-~~v~v~~~~~-~G--~~~~-i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 219 TLLSILK---LN--IKFNSPVTEVKKIKD-DEYEVIYSTK-DG--SKKS-IFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHHC---CC--EECSCCEEEEEEEET-TEEEEEECCT-TS--CCEE-EEESCEEECCC--EEECCC
T ss_pred HHHhcCE---EE--EEECCEEEEEEEcCC-CcEEEEEEec-CC--ceEE-EEcCEEEECcC--CCcccc
Confidence 5554443 44 489999999987531 3455666521 11 2257 99999999999 445443
No 249
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.34 E-value=6.4e-07 Score=74.01 Aligned_cols=101 Identities=15% Similarity=0.187 Sum_probs=68.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .. ..+.
T Consensus 154 ~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~~~- 197 (335)
T 2a87_A 154 RDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KIML- 197 (335)
T ss_dssp TTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TTHH-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HHHH-
Confidence 35799999999999999999999999999998876321 00 0111
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.+..++.++.+ +.+++++++...+ +...|.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 198 --~~~~~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G--~~p~~ 254 (335)
T 2a87_A 198 --DRARNNDKIRF--LTNHTVVAVDGDT--TVTGLRVRDTNTG--AETT-LPVTGVFVAIG--HEPRS 254 (335)
T ss_dssp --HHHHHCTTEEE--ECSEEEEEEECSS--SCCEEEEEEETTS--CCEE-ECCSCEEECSC--EEECC
T ss_pred --HHHhccCCcEE--EeCceeEEEecCC--cEeEEEEEEcCCC--ceEE-eecCEEEEccC--CccCh
Confidence 12234556655 8899999998654 3333444432111 2267 89999999999 44443
No 250
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.34 E-value=4.8e-07 Score=78.84 Aligned_cols=38 Identities=24% Similarity=0.426 Sum_probs=36.2
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 79999999999999999999999999999999988873
No 251
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.30 E-value=4.8e-07 Score=78.88 Aligned_cols=40 Identities=28% Similarity=0.331 Sum_probs=37.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
.++||+|||||++|+++|..|.+.|.+|+|+|+.+.+||.
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 4689999999999999999999999999999999988884
No 252
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.29 E-value=7.3e-07 Score=75.27 Aligned_cols=42 Identities=19% Similarity=0.265 Sum_probs=38.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~ 48 (255)
.+||+|||||++|+++|..|.+.|.+|+|+|+.+.+||.+..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 379999999999999999999999999999999999986644
No 253
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.29 E-value=6.3e-07 Score=75.20 Aligned_cols=39 Identities=23% Similarity=0.283 Sum_probs=36.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccc
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~ 46 (255)
+||+|||||++|+++|..|++.|.+|+|+|+.+.+||..
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~ 40 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNA 40 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcce
Confidence 699999999999999999999999999999999888843
No 254
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.29 E-value=7.8e-07 Score=74.31 Aligned_cols=35 Identities=29% Similarity=0.461 Sum_probs=33.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+||+|||||++|+++|+.|++.|.+|+|+|+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 46899999999999999999999999999999975
No 255
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.28 E-value=1.2e-05 Score=71.76 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=71.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
+.+++|||||..|+.+|..|++.|.+|+++++...+. . . ..++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~--------------------------------~-~-d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR--------------------------------G-F-DQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------------------T-S-CHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC--------------------------------c-C-CHHHHHH
Confidence 5689999999999999999999999999999862110 0 0 1356677
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEc-----CC--CCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYD-----EA--TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~-----~~--~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
+.+.+++.++.+ +.++.++++... +. .+...+..... ++ ++.. +.+|.||+|+| ..|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~-~g--~~~~-~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT-DG--KKFE-EEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEET-TS--CEEE-EEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeC-CC--cEEe-ccCCEEEEEeC--Ccccc
Confidence 777778888776 888888887643 21 13344443211 11 2244 56999999999 44443
No 256
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.26 E-value=9e-07 Score=75.91 Aligned_cols=41 Identities=17% Similarity=0.333 Sum_probs=37.9
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
...+||+|||+|++|+.+|..|++.|++|+++|++..+||.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 44 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGE 44 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcccc
Confidence 34689999999999999999999999999999999988884
No 257
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.26 E-value=5.3e-07 Score=77.29 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
++||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 3799999999999999999999999999999976
No 258
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.25 E-value=6.2e-07 Score=75.75 Aligned_cols=84 Identities=13% Similarity=0.074 Sum_probs=65.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|++.|.+|+++|+.+.+... .. ..++.++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~-------------------------------~~-~~~~~~~ 193 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER-------------------------------QL-DRDGGLF 193 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-------------------------------TS-CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------------------hc-CHHHHHH
Confidence 478999999999999999999999999999998743200 00 1366777
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+++.++.+ +.+++++++ . .+ +.+|.||+|+|.
T Consensus 194 ~~~~l~~~gV~~--~~~~~v~~i--------------g--------~~-~~~D~vv~a~G~ 229 (385)
T 3klj_A 194 LKDKLDRLGIKI--YTNSNFEEM--------------G--------DL-IRSSCVITAVGV 229 (385)
T ss_dssp HHHHHHTTTCEE--ECSCCGGGC--------------H--------HH-HHHSEEEECCCE
T ss_pred HHHHHHhCCCEE--EeCCEEEEc--------------C--------eE-EecCeEEECcCc
Confidence 888888888766 777666443 1 56 899999999994
No 259
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.25 E-value=7.6e-07 Score=77.13 Aligned_cols=39 Identities=23% Similarity=0.337 Sum_probs=36.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccCCCCcc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASI 45 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~~~g~~ 45 (255)
.+||+|||||++|+++|+.|++.| .+|+|+|+.+.+||.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999998888773
No 260
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.24 E-value=1e-06 Score=76.33 Aligned_cols=43 Identities=40% Similarity=0.519 Sum_probs=37.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCCCCccccc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKK 48 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~~g~~~~~ 48 (255)
..+||+|||||++|+.+|..|.+.|. +|+|+|+.+.+||.+..
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 35899999999999999999999998 89999999988885543
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.24 E-value=5.5e-06 Score=67.50 Aligned_cols=102 Identities=21% Similarity=0.242 Sum_probs=64.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|..|+.+|..|++.|.+|+++++..... .. . .
T Consensus 151 ~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~----------------------------------~~-~---~ 192 (314)
T 4a5l_A 151 RNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR----------------------------------AS-K---T 192 (314)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-H---H
T ss_pred CCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc----------------------------------cc-c---h
Confidence 35799999999999999999999999999998755210 00 0 1
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCCCCCCC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~s~~~~ 153 (255)
.........+... .....+..+..... ..-.+...+...+ +..+ +.+|.|++|+| ..|+.
T Consensus 193 ~~~~~~~~~~~~~--~~~~~~~~i~~~~~-~~~~~~~~~~~~~--~~~~-i~~d~vi~a~G--~~pn~ 252 (314)
T 4a5l_A 193 MQERVLNHPKIEV--IWNSELVELEGDGD-LLNGAKIHNLVSG--EYKV-VPVAGLFYAIG--HSPNS 252 (314)
T ss_dssp HHHHHHTCTTEEE--ECSEEEEEEEESSS-SEEEEEEEETTTC--CEEE-EECSEEEECSC--EEESC
T ss_pred hhhhhhcccceee--EeeeeeEEEEeeee-ccceeEEeecccc--ccee-eccccceEecc--cccCh
Confidence 1122223333333 66666777765541 2222333332222 3378 99999999999 55544
No 262
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.22 E-value=5.4e-06 Score=67.44 Aligned_cols=97 Identities=16% Similarity=0.153 Sum_probs=68.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
...+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. .+
T Consensus 146 ~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~~----~~ 187 (315)
T 3r9u_A 146 KNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR----------------------------------AA----PS 187 (315)
T ss_dssp TTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB----------------------------------SC----HH
T ss_pred CcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC----------------------------------CC----HH
Confidence 35799999999999999999999999999998876421 00 12
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
++.+..++.++.+ +.++++.++...+ .....|.+.. .++ ++.+ +.+|.||+|+|.
T Consensus 188 ~~~~~~~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~-~~g--~~~~-~~~D~vv~a~G~ 242 (315)
T 3r9u_A 188 TVEKVKKNEKIEL--ITSASVDEVYGDK-MGVAGVKVKL-KDG--SIRD-LNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHHCTTEEE--ECSCEEEEEEEET-TEEEEEEEEC-TTS--CEEE-ECCSCEEECSCE
T ss_pred HHHHHHhcCCeEE--EeCcEEEEEEcCC-CcEEEEEEEc-CCC--CeEE-eecCeEEEEEcC
Confidence 2333345666665 8899999998764 1223355441 111 3357 999999999994
No 263
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.19 E-value=1.5e-06 Score=75.08 Aligned_cols=40 Identities=23% Similarity=0.348 Sum_probs=37.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
..+||+|||+|.+|+.+|..|++.|.+|+++|+++.+||.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~ 58 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGE 58 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCC
Confidence 4589999999999999999999999999999999988883
No 264
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.19 E-value=5.1e-06 Score=72.91 Aligned_cols=95 Identities=19% Similarity=0.154 Sum_probs=68.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.+. .+ ..
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HH
Confidence 5799999999999999999999999999998876321 00 22
Q ss_pred HHHHHHh-cCCCCeeEeccEEEEEEEcCCCCcE-EEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 87 l~~~~~~-~~l~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+.+.+.+ .++.+ +.+++++++...+ +.. .+.+.+..++ ++.. +.+|.|++|+|.
T Consensus 396 l~~~l~~~~gV~v--~~~~~v~~i~~~~--~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 451 (521)
T 1hyu_A 396 LQDKVRSLKNVDI--ILNAQTTEVKGDG--SKVVGLEYRDRVSG--DIHS-VALAGIFVQIGL 451 (521)
T ss_dssp HHHHHTTCTTEEE--ECSEEEEEEEECS--SSEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHHHHhcCCCcEE--EeCCEEEEEEcCC--CcEEEEEEEeCCCC--ceEE-EEcCEEEECcCC
Confidence 3344444 35555 8999999998654 333 4555543222 3367 899999999993
No 265
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.17 E-value=3.3e-06 Score=68.13 Aligned_cols=85 Identities=6% Similarity=-0.057 Sum_probs=63.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..++++|||+|+.|+.+|..|.+.| +|+++++... .+.+
T Consensus 140 ~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~----------------------------------------~~~~ 178 (297)
T 3fbs_A 140 DQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV----------------------------------------EPDA 178 (297)
T ss_dssp TTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC----------------------------------------CCCH
T ss_pred cCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC----------------------------------------CCCH
Confidence 3579999999999999999999999 9999987652 0012
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+.+.++.+ + .++|+++... + .|.+.++ .+ +.+|.||+|+|.
T Consensus 179 ~~~~~l~~~gv~i--~-~~~v~~i~~~---~--~v~~~~g-------~~-~~~D~vi~a~G~ 224 (297)
T 3fbs_A 179 DQHALLAARGVRV--E-TTRIREIAGH---A--DVVLADG-------RS-IALAGLFTQPKL 224 (297)
T ss_dssp HHHHHHHHTTCEE--E-CSCEEEEETT---E--EEEETTS-------CE-EEESEEEECCEE
T ss_pred HHHHHHHHCCcEE--E-cceeeeeecC---C--eEEeCCC-------CE-EEEEEEEEccCc
Confidence 3445566778765 5 3788888642 2 5666654 67 899999999994
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.16 E-value=9.3e-06 Score=73.72 Aligned_cols=98 Identities=11% Similarity=0.039 Sum_probs=70.4
Q ss_pred CCeEEEEC--CCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG--~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
.++|+||| +|..|+.+|..|.+.|.+|+++++.+.+..... .....
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~--------------------------------~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN--------------------------------NTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------GGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------cchhH
Confidence 46899999 999999999999999999999998775421100 01224
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
..+.+.+++.++.+ +.+++|+++... ...+...... +..+ +.+|.||+|+|.
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~----~~~v~~~~~~----~~~~-i~aD~VV~A~G~ 622 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAG----GVTVRDTYAS----IERE-LECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETT----EEEEEETTTC----CEEE-EECSEEEEESCE
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECC----eEEEEEccCC----eEEE-EECCEEEECCCC
Confidence 55666677778776 999999999743 3334332211 2267 999999999993
No 267
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.12 E-value=1.9e-06 Score=77.25 Aligned_cols=40 Identities=18% Similarity=0.244 Sum_probs=36.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
..+||+|||||++|+.+|..|++.|++|+|+|+....++.
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 3589999999999999999999999999999999877753
No 268
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.08 E-value=1.6e-06 Score=72.03 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=31.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhCC------CCeEEEeccCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQS------IPYVILERENC 41 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g------~~v~lie~~~~ 41 (255)
+||+|||||++|+++|+.|++.| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 49999999999999999999998 89999999863
No 269
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.06 E-value=4.2e-06 Score=75.62 Aligned_cols=40 Identities=30% Similarity=0.394 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
..+||+|||||++|+++|..|.+.|++|+|+|+.+.+||.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~ 145 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 145 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCc
Confidence 4589999999999999999999999999999999988874
No 270
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.03 E-value=5.6e-06 Score=76.47 Aligned_cols=40 Identities=30% Similarity=0.394 Sum_probs=37.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI 45 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~ 45 (255)
..++|+|||||++||++|..|.+.|++|+|+|+...+||.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 3579999999999999999999999999999999988874
No 271
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.97 E-value=8.2e-06 Score=68.27 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=32.6
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~ 42 (255)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 69999999999999999999999999999997743
No 272
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.95 E-value=0.0001 Score=59.98 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
+++|+|||||+.|+.+|..|++.|.+|+|+++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 57999999999999999999999999999998764
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.91 E-value=5.2e-05 Score=65.51 Aligned_cols=36 Identities=14% Similarity=0.046 Sum_probs=33.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 196 ~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 196 KDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 468999999999999999999999999999998764
No 274
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.88 E-value=7e-05 Score=70.43 Aligned_cols=99 Identities=13% Similarity=0.125 Sum_probs=69.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (255)
.++++|||+|+.|+.+|..|.+.|.+|+|+|+.+.+. ..
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------~~---- 322 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------AA---- 322 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------------------------------------HH----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------------------------------------hh----
Confidence 4789999999999999999999999999999976421 01
Q ss_pred HHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcc--cCCCCceeeEEEeeCEEEEeecCCCCCC
Q 025254 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN--LLSPGREIEEYYSGRFLVVASGETTNPF 152 (255)
Q Consensus 87 l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~--~~~~~~~~~~~i~~d~vViAtG~~s~~~ 152 (255)
.+.+++.++.+ +.++.++++...+......|.+.+ ....+++..+ +.+|.||+|+| ..|+
T Consensus 323 -~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~-i~~D~Vv~a~G--~~P~ 384 (965)
T 2gag_A 323 -AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEARELGGTQR-FEADVLAVAGG--FNPV 384 (965)
T ss_dssp -HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEE-EECSEEEEECC--EEEC
T ss_pred -HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEE-EEcCEEEECCC--cCcC
Confidence 24456778777 999999999873111322454443 1000013367 99999999999 4444
No 275
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.82 E-value=0.00011 Score=64.64 Aligned_cols=36 Identities=22% Similarity=0.341 Sum_probs=33.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 368999999999999999999999999999999875
No 276
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.82 E-value=3.2e-05 Score=63.89 Aligned_cols=34 Identities=26% Similarity=0.413 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..++|+|||+|..|+.+|..|++.+ +|+++.+..
T Consensus 162 ~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 162 AGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 3579999999999999999999998 699998863
No 277
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.76 E-value=2.2e-05 Score=69.30 Aligned_cols=36 Identities=33% Similarity=0.444 Sum_probs=33.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..+|++|||+|++|+.+|..|++.|.+|+|+|++..
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999863
No 278
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.76 E-value=3.1e-05 Score=69.07 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=41.3
Q ss_pred cccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCCccccc
Q 025254 3 EQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (255)
Q Consensus 3 ~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~ 48 (255)
.++..+|++|||+|..|..+|..|++.|.+|+++|++++.||.|..
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 3445799999999999999999999999999999999999996644
No 279
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.76 E-value=0.00015 Score=65.51 Aligned_cols=124 Identities=15% Similarity=0.006 Sum_probs=64.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEe--ccCCCCc--cccc-C----CCCCeEEecccccccCCCCCCCCCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILE--RENCYAS--IWKK-Y----SYDRLRLHLAKQFCQLPHLPFPSSYPM 76 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie--~~~~~g~--~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (255)
..++|+|||||..|+.+|..|++.|.+|+++- .....+. .... . .++... .......-+...+ .....
T Consensus 493 ~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~~~--~~l~~ 569 (671)
T 1ps9_A 493 VGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQRKA--SKPGQ 569 (671)
T ss_dssp CCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECSSC--SCTTT
T ss_pred CCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEecc--hhhcc
Confidence 35799999999999999999999987765420 0000000 0000 0 000000 0000000000000 00000
Q ss_pred CCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeec
Q 025254 77 FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (255)
Q Consensus 77 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG 146 (255)
..+ .....++.+.+++.++.+ +.+++|+++.. +...+. .++ ++.+ +.+|.||+|+|
T Consensus 570 ~l~-~~~~~~~~~~l~~~GV~v--~~~~~v~~i~~----~~v~~~-~~G-----~~~~-i~~D~Vi~a~G 625 (671)
T 1ps9_A 570 GLG-KTTGWIHRTTLLSRGVKM--IPGVSYQKIDD----DGLHVV-ING-----ETQV-LAVDNVVICAG 625 (671)
T ss_dssp TSC-TTTHHHHHHHHHHTTCEE--ECSCEEEEEET----TEEEEE-ETT-----EEEE-ECCSEEEECCC
T ss_pred ccc-cccHHHHHHHHHhcCCEE--EeCcEEEEEeC----CeEEEe-cCC-----eEEE-EeCCEEEECCC
Confidence 011 123345566677778776 99999998863 333343 222 3367 99999999999
No 280
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.76 E-value=8.9e-05 Score=63.67 Aligned_cols=35 Identities=17% Similarity=0.097 Sum_probs=32.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCC-eEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIP-YVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~-v~lie~~~ 40 (255)
..++|+|||+|.+|+.+|..|++.+.+ |+++++.+
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 357999999999999999999999998 99998865
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.76 E-value=3.8e-05 Score=66.20 Aligned_cols=36 Identities=22% Similarity=0.319 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~ 41 (255)
..++|+|||||..|+.+|..+.+.|. +|+++++.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 36799999999999999999999998 4999988763
No 282
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.74 E-value=2.1e-05 Score=68.99 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=32.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-CCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie~~~~ 41 (255)
.+|+||||+|++|+.+|..|++ .+++|+|+|+++.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999998 4789999999864
No 283
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.69 E-value=0.00013 Score=66.64 Aligned_cols=104 Identities=9% Similarity=-0.003 Sum_probs=69.0
Q ss_pred CCeEEEEC--CCHHHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHH
Q 025254 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (255)
Q Consensus 7 ~~~vvIIG--~G~~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (255)
.++|+||| ||..|+.+|..|++.|.+|+++++.+ +..... + . ...
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~-----------------~------------~---~~~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMH-----------------F------------T---LEY 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHH-----------------H------------T---TCH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccccc-----------------c------------c---ccH
Confidence 57999999 99999999999999999999999977 421000 0 0 002
Q ss_pred HHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEc--cc-CC-----------CCceeeEEEeeCEEEEeecCCCC
Q 025254 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS--NL-LS-----------PGREIEEYYSGRFLVVASGETTN 150 (255)
Q Consensus 85 ~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~-~~-----------~~~~~~~~i~~d~vViAtG~~s~ 150 (255)
..+.+.+++.|+.+ +.+++++++.. +...+... ++ .. ..+++.+ +.+|.||+|+| ..
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~aD~Vv~a~G--~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEP----GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRW-IEFDSLVLVTG--RH 645 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEET----TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEE-EECSEEEEESC--EE
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEEC----CeEEEEEecCCceEEecccccccccccCCccee-eeCCEEEECCC--CC
Confidence 34455566778776 99999999863 23333321 11 00 0012357 89999999999 44
Q ss_pred CC
Q 025254 151 PF 152 (255)
Q Consensus 151 ~~ 152 (255)
|+
T Consensus 646 p~ 647 (729)
T 1o94_A 646 SE 647 (729)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 284
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.68 E-value=3.4e-05 Score=68.41 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~~ 41 (255)
..+|+||||||.+|+.+|..|++.+ .+|+|+|+++.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999997 69999999876
No 285
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.66 E-value=0.00034 Score=60.28 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--------------------CC-CeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--------------------SI-PYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--------------------g~-~v~lie~~~~~ 42 (255)
..+|+|||+|..|+.+|..|++. +. +|+|+++...+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 57999999999999999999874 54 89999987643
No 286
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.64 E-value=0.00048 Score=59.37 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHh--------------------hCCC-CeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLS--------------------LQSI-PYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~--------------------~~g~-~v~lie~~~~ 41 (255)
.++++|||+|..|+.+|..|+ +.+. +|+|+++...
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 579999999999999999999 5677 6999998764
No 287
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.63 E-value=2.9e-05 Score=68.38 Aligned_cols=35 Identities=37% Similarity=0.482 Sum_probs=32.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~ 42 (255)
.+|++|||+|.+|+.+|..|++ +.+|+|+|++...
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998754
No 288
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.63 E-value=1.7e-05 Score=71.63 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=33.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC--------CCeEEEeccC-CC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS--------IPYVILEREN-CY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g--------~~v~lie~~~-~~ 42 (255)
.++|+|||||++|+++|+.|.+.| ++|+|+|+.+ .+
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 479999999999999999999988 8999999998 78
No 289
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.62 E-value=0.00012 Score=62.60 Aligned_cols=103 Identities=12% Similarity=0.020 Sum_probs=64.1
Q ss_pred CeEEEECCCHHH------HHHH----HHHhhCCCC-----eEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCC
Q 025254 8 VEVIMVGAGTSG------LATA----ACLSLQSIP-----YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPS 72 (255)
Q Consensus 8 ~~vvIIG~G~~G------l~~a----~~l~~~g~~-----v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (255)
.+++|||+|++| +..| ..+.+.|.+ |+++++.+.++..
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~--------------------------- 202 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHL--------------------------- 202 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCT---------------------------
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCcccccc---------------------------
Confidence 467899997654 5555 566677764 9999987754310
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 73 SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 73 ~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
..+.+. +..+.+.+.+++.++++ +.+++|++++. +...+.....+....+..+ +.+|.+++|+|.
T Consensus 203 ~l~~~~---~~~~~~~~~l~~~gI~~--~~~~~v~~v~~----~~v~~~~~~~~g~~~~~~~-i~~D~vv~~~g~ 267 (437)
T 3sx6_A 203 GIQGVG---DSKGILTKGLKEEGIEA--YTNCKVTKVED----NKMYVTQVDEKGETIKEMV-LPVKFGMMIPAF 267 (437)
T ss_dssp TTTCCT---THHHHHHHHHHHTTCEE--ECSEEEEEEET----TEEEEEEECTTSCEEEEEE-EECSEEEEECCE
T ss_pred ccCcch---HHHHHHHHHHHHCCCEE--EcCCEEEEEEC----CeEEEEecccCCccccceE-EEEeEEEEcCCC
Confidence 001111 34567777788888876 99999999864 2333332111110001377 999999999984
No 290
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.58 E-value=0.00014 Score=62.12 Aligned_cols=99 Identities=13% Similarity=0.097 Sum_probs=63.7
Q ss_pred CeEEEECCCHHH------HHHH----HHHhhCC----CCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCC
Q 025254 8 VEVIMVGAGTSG------LATA----ACLSLQS----IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (255)
Q Consensus 8 ~~vvIIG~G~~G------l~~a----~~l~~~g----~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (255)
.+++|||+|++| +..| ..+.+.| .+|+++++.+.++.. .
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~---------------------------~ 195 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHF---------------------------G 195 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCT---------------------------T
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccc---------------------------c
Confidence 467899998754 5555 4555666 489999887644210 0
Q ss_pred CCCCCCHHHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCC
Q 025254 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (255)
Q Consensus 74 ~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~ 148 (255)
...+ ....+.+.+.+++.++++ +.+++|++++. +. +.+.+... +..+ +.+|.||+|+|..
T Consensus 196 l~~~---~~~~~~l~~~l~~~GV~i--~~~~~v~~v~~----~~--v~~~~~~~---~g~~-i~~D~vv~a~G~~ 255 (430)
T 3h28_A 196 VGGI---GASKRLVEDLFAERNIDW--IANVAVKAIEP----DK--VIYEDLNG---NTHE-VPAKFTMFMPSFQ 255 (430)
T ss_dssp TTCS---TTHHHHHHHHHHHTTCEE--ECSCEEEEECS----SE--EEEECTTS---CEEE-EECSEEEEECEEE
T ss_pred cCcc---hHHHHHHHHHHHHCCCEE--EeCCEEEEEeC----Ce--EEEEecCC---CceE-EeeeEEEECCCCc
Confidence 0011 134567777788888877 99999999854 23 33333211 2277 9999999999953
No 291
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.53 E-value=8.4e-05 Score=64.90 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=34.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g 43 (255)
..+|++|||+|++|+.+|..|++.|.+|+|+|++...+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999987543
No 292
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.53 E-value=6.9e-05 Score=66.46 Aligned_cols=35 Identities=34% Similarity=0.562 Sum_probs=32.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~ 40 (255)
..+|+||||||.+|+.+|..|++. +.+|+|+|+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999986 78999999987
No 293
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.47 E-value=0.00046 Score=65.35 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=63.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
..+|+|||||..|+.+|..+.+.|. +|+++++.+..- + +. ...++
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~---------------------~---------~~--~~~e~-- 377 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN---------------------I---------RA--VPEEV-- 377 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG---------------------C---------CS--CHHHH--
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh---------------------C---------CC--CHHHH--
Confidence 4599999999999999999999996 899998865210 0 00 01121
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcE-EEEEccc---CCC-----CceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNL---LSP-----GREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~---~~~-----~~~~~~~i~~d~vViAtG~ 147 (255)
+.+++.|+.+ +++..++++...+ +.. .|.+.+. .++ .+++.+ +.+|.||+|+|.
T Consensus 378 ---~~~~~~Gv~~--~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~-i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 378 ---ELAKEEKCEF--LPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVH-LKADVVISAFGS 440 (1025)
T ss_dssp ---HHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEE-EECSEEEECSCE
T ss_pred ---HHHHHcCCEE--EeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEE-EECCEEEECCCC
Confidence 2345567665 7888888876533 322 2332210 000 013357 899999999994
No 294
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.45 E-value=0.00011 Score=64.20 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..+|++|||+|++|+.+|..|++.+.+|+++|++..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999999864
No 295
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.44 E-value=0.00015 Score=52.74 Aligned_cols=40 Identities=18% Similarity=0.319 Sum_probs=33.1
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
|+......+|+|+|+|..|..+|..|.+.|.+|+++|+.+
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4444456899999999999999999999999999999865
No 296
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.42 E-value=0.00023 Score=62.71 Aligned_cols=36 Identities=17% Similarity=0.322 Sum_probs=33.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..++|+|||+|++|+.+|..|++.+.+|+++++.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 357999999999999999999999999999999885
No 297
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.41 E-value=0.00057 Score=58.92 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|+|+|+|-.|..+|..|...|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999976
No 298
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.37 E-value=8.4e-05 Score=65.72 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=32.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-CCCCeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie~~~~~ 42 (255)
.+|++|||||.+|+.+|..|++ .+.+|+|+|+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 58899999998744
No 299
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.36 E-value=0.00063 Score=57.55 Aligned_cols=52 Identities=4% Similarity=-0.037 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecCC
Q 025254 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (255)
Q Consensus 81 ~~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~~ 148 (255)
..+.+.+.+.+++.++++ +.+++|++++.. . |.+.++ .+ +.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~--~~~~~v~~i~~~----~--v~~~~g-------~~-~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKL--VHNFKIKEIREH----E--IVDEKG-------NT-IPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEE--ECSCCEEEECSS----E--EEETTS-------CE-EECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEE--EcCCceEEECCC----e--EEECCC-------CE-EeeeEEEECCCCC
Confidence 367777888888888877 899999988542 2 666554 67 9999999999953
No 300
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.29 E-value=0.00042 Score=61.13 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 57999999999999999999999999999999874
No 301
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.26 E-value=0.00024 Score=63.23 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=33.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhh-CCCCeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~-~g~~v~lie~~~~~ 42 (255)
.+|++|||+|++|+.+|..|++ .+.+|+++|++...
T Consensus 24 ~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 24 TYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 5899999999999999999999 79999999998643
No 302
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.25 E-value=0.00023 Score=62.76 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=33.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCY 42 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~~~ 42 (255)
.+|++|||+|++|+.+|..|++. +.+|+++|++...
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 58999999999999999999998 8999999998644
No 303
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.04 E-value=0.0019 Score=56.34 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=30.3
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~ 40 (255)
..++|+|||+|.+|+-++..|++. +.+|+++-|.+
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 467999999999999999999875 66899998765
No 304
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.00 E-value=0.00059 Score=50.68 Aligned_cols=35 Identities=34% Similarity=0.398 Sum_probs=32.3
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCceee
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSPACLW 223 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~~~~ 223 (255)
+++|||+|.+|+++|..|.+.|.+|+++++.+ ..+
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-~~~ 37 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-SKV 37 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CTT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-Ccc
Confidence 68999999999999999999999999999987 444
No 305
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.96 E-value=0.0014 Score=46.71 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
...+|+|+|.|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 35689999999999999999999999999999976
No 306
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.95 E-value=0.0011 Score=47.21 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999865
No 307
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=96.88 E-value=0.0041 Score=50.23 Aligned_cols=88 Identities=13% Similarity=0.004 Sum_probs=57.0
Q ss_pred CCeEEEECCCH-HHHHHHHHHhhCCCCeEEEeccCCCCcccccCCCCCeEEecccccccCCCCCCCCCCCCCCCHHHHHH
Q 025254 7 GVEVIMVGAGT-SGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (255)
Q Consensus 7 ~~~vvIIG~G~-~Gl~~a~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (255)
.++++|||||. .++.+|..+.+.+.+|+++++...+. +
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~~-----------------------------------------~ 184 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNELS-----------------------------------------Q 184 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCCC-----------------------------------------H
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEeccccch-----------------------------------------h
Confidence 46788888885 56888888888899999997754321 1
Q ss_pred HHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 86 ~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
.+.+.+...++.+ +.+ .+..+...+ .....|.+.++ .+ +.+|.+|++.|.
T Consensus 185 ~~~~~l~~~g~~~--~~~-~v~~~~~~~-~~~~~v~~~~g-------~~-i~~~~~vi~~g~ 234 (304)
T 4fk1_A 185 TIMDELSNKNIPV--ITE-SIRTLQGEG-GYLKKVEFHSG-------LR-IERAGGFIVPTF 234 (304)
T ss_dssp HHHHHHHTTTCCE--ECS-CEEEEESGG-GCCCEEEETTS-------CE-ECCCEEEECCEE
T ss_pred hhhhhhhccceeE--eee-eEEEeecCC-Ceeeeeecccc-------ce-eeecceeeeecc
Confidence 2233455566654 544 466665443 12234666554 67 888999988884
No 308
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.80 E-value=0.0015 Score=46.12 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|+|||+|..|..+|..|.+.|.+|+++|+.+
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999854
No 309
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.71 E-value=0.0025 Score=46.05 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+++|+|+|..|..++..|.+.|++|+++|+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999863
No 310
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.68 E-value=0.0017 Score=44.26 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~ 40 (255)
.++|+|+|+|..|..++..|.+.| ++|+++++.+
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999865
No 311
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.65 E-value=0.0022 Score=45.42 Aligned_cols=34 Identities=12% Similarity=0.148 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|+|+|..|..++..|.+.|.+|+++|+..
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999854
No 312
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.63 E-value=0.0018 Score=52.89 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=31.4
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
|+++ ...+|+|||+|..|...|..++..|++|+++|..+
T Consensus 1 Ma~p-~~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASP-AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCC-CCCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 6544 35799999999999999999999999999999865
No 313
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=96.58 E-value=0.0013 Score=51.42 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=30.6
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.|+|||+|++|.-+|..|++.|.+|+++++++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.37 E-value=0.0039 Score=50.98 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=31.5
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
|+.+ ...+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 1 m~~~-~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 1 MASP-AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCC-CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6544 35799999999999999999999999999999875
No 315
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.32 E-value=0.0047 Score=47.65 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=32.2
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..++|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 46899999999999999999999999999998754
No 316
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.28 E-value=0.0043 Score=46.16 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-CCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-g~~v~lie~~~ 40 (255)
..+|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 45899999999999999999999 99999999865
No 317
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=96.17 E-value=0.0035 Score=48.62 Aligned_cols=32 Identities=41% Similarity=0.573 Sum_probs=30.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEec
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~ 218 (255)
..++|||+|.+|+++|..|++.|.+|+++++.
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~ 35 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQS 35 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecC
Confidence 46999999999999999999999999999997
No 318
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=96.16 E-value=0.0024 Score=55.44 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
|+|+|||+|..|.-+|..|++.|.+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999999986
No 319
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.11 E-value=0.0052 Score=47.16 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=30.4
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999866
No 320
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=96.09 E-value=0.0044 Score=49.36 Aligned_cols=35 Identities=14% Similarity=0.289 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+.|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 46899999999999999999999999999999865
No 321
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.07 E-value=0.006 Score=49.43 Aligned_cols=40 Identities=18% Similarity=0.173 Sum_probs=31.9
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
|+......+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4333335789999999999999999999999999999865
No 322
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.06 E-value=0.0041 Score=52.13 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=31.2
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
-+|+|||+|..|.-+|..|++.|.+|++++|++
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 379999999999999999999999999999876
No 323
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.02 E-value=0.0069 Score=49.75 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
+.+|+|||+|..|..+|..|+..|+ +|+++|...
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4699999999999999999999988 999999875
No 324
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.01 E-value=0.0094 Score=48.37 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
...+|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 45789999999999999999999999999999875
No 325
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.99 E-value=0.0077 Score=48.28 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999865
No 326
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.94 E-value=0.0062 Score=52.11 Aligned_cols=37 Identities=16% Similarity=0.382 Sum_probs=33.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~g 43 (255)
.++|+|||.|.+|+++|..|.++|++|+++|......
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 5789999999999999999999999999999976543
No 327
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.93 E-value=0.0078 Score=51.67 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..++|.|||.|.+|+++|..|.++|++|++.|...
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35899999999999999999999999999999865
No 328
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.90 E-value=0.009 Score=48.31 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3689999999999999999999999999999865
No 329
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=95.86 E-value=0.0078 Score=49.12 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
..+|+|||+|..|..+|..|++.|+ +|+++|+.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 4699999999999999999999998 999999865
No 330
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.84 E-value=0.057 Score=45.89 Aligned_cols=54 Identities=11% Similarity=0.001 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 82 ~~~~~l~~~~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
...+++.+.+++.|+++ +++++|++++. +...+...++ +..+ +.+|.+++|+|.
T Consensus 201 ~~~~~l~~~l~~~GV~~--~~~~~v~~v~~----~~~~~~~~~g-----~~~~-i~~d~vi~~~G~ 254 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDW--IANVAVKAIEP----DKVIYEDLNG-----NTHE-VPAKFTMFMPSF 254 (430)
T ss_dssp THHHHHHHHHHHTTCEE--ECSCEEEEECS----SEEEEECTTS-----CEEE-EECSEEEEECEE
T ss_pred HHHHHHHHHHHhCCeEE--EeCceEEEEeC----CceEEEeeCC-----CceE-eecceEEEeccC
Confidence 45567778888888877 99999999853 3333333222 2368 999999999995
No 331
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.84 E-value=0.0081 Score=51.07 Aligned_cols=34 Identities=18% Similarity=0.285 Sum_probs=30.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
...+|.|||.|..|+.+|..|++ |++|+++|+.+
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 34699999999999999999998 99999999875
No 332
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.78 E-value=0.0096 Score=48.61 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=31.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|+|||+|..|...|..|++.|.+|+++++.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999865
No 333
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=95.77 E-value=0.0063 Score=51.85 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..++|+|||+|..|.-+|..|++.|.+|+++++++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 34689999999999999999999999999999876
No 334
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.72 E-value=0.0094 Score=51.52 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4799999999999999999999999999999865
No 335
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=95.71 E-value=0.0067 Score=49.47 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|.-+|..|++.|.+|+++++++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999985
No 336
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.71 E-value=0.012 Score=44.94 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..+|.|||+|..|...|..|.+.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998763
No 337
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.71 E-value=0.012 Score=48.12 Aligned_cols=34 Identities=18% Similarity=0.381 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
..+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 4699999999999999999999988 899999765
No 338
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.68 E-value=0.0099 Score=47.98 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=32.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..+|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999774
No 339
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=95.65 E-value=0.0068 Score=50.42 Aligned_cols=32 Identities=38% Similarity=0.501 Sum_probs=30.2
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
-|+|||+|+.|.-+|..|++.|.+|++++|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 48999999999999999999999999999975
No 340
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.65 E-value=0.014 Score=48.09 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=33.1
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
|+..+...+|.|||.|..|-+.|..|.+.|++|+++|+.+
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5544556799999999999999999999999999999865
No 341
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=95.65 E-value=0.012 Score=51.25 Aligned_cols=35 Identities=34% Similarity=0.495 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
....|+|||+|.+|+.+|..|++.|.+|+++++.+
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~ 125 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRI 125 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEecc
Confidence 45789999999999999999999999999999986
No 342
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.64 E-value=0.012 Score=47.09 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=30.8
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
+|.|||+|..|...|..|.+.|++|+++++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998763
No 343
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.64 E-value=0.013 Score=49.34 Aligned_cols=36 Identities=17% Similarity=0.255 Sum_probs=32.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
.+.+|+|||+|.+|+.+|..+...|.+|+++|+...
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 357999999999999999999999999999999763
No 344
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.63 E-value=0.013 Score=48.20 Aligned_cols=33 Identities=30% Similarity=0.381 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|+|||+|..|...|..|++.|.+|+++++.+
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~~ 36 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARGA 36 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEEChH
Confidence 589999999999999999999999999999853
No 345
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=95.57 E-value=0.011 Score=49.72 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...+|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34689999999999999999999999999999986
No 346
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.56 E-value=0.013 Score=47.79 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
+.+|+|||+|..|..+|..|++.|. +|+++|+..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4699999999999999999999998 999999864
No 347
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.56 E-value=0.011 Score=48.12 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=30.4
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
++|+|||+|..|...|..|++.|.+|+++++..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 589999999999999999999999999999865
No 348
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=95.56 E-value=0.013 Score=50.23 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..+|.|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47999999999999999999999999999999874
No 349
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.56 E-value=0.014 Score=42.05 Aligned_cols=38 Identities=21% Similarity=0.249 Sum_probs=33.3
Q ss_pred CCCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 182 KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 182 ~~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
....+++++|+|+|.+|..++..|.+.|.+|+++.|++
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 44457899999999999999999999999999999976
No 350
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=95.52 E-value=0.0076 Score=46.75 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=30.7
Q ss_pred ccCCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 4 QAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 4 ~~~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
.....+++|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 6 ~~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 6 VAKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp ----CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 3345789999999999999999999999 999998763
No 351
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.52 E-value=0.012 Score=47.99 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=30.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
.+.+|+|||+|..|..+|..|+..+. +++++|...
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 35799999999999999999999887 899999865
No 352
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=95.49 E-value=0.011 Score=49.65 Aligned_cols=34 Identities=32% Similarity=0.460 Sum_probs=32.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..+|+|||+|..|.-+|..|++.|.+|+++++++
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4689999999999999999999999999999987
No 353
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=95.49 E-value=0.013 Score=49.26 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=32.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..+|+|||+|..|.-+|..|++.|.+|+++++++
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999986
No 354
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.48 E-value=0.017 Score=47.92 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 355
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.48 E-value=0.015 Score=47.19 Aligned_cols=36 Identities=22% Similarity=0.218 Sum_probs=32.8
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
...+|.|||.|..|...|..|++.|++|+++|+.+.
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred cCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 347999999999999999999999999999998763
No 356
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.48 E-value=0.012 Score=50.82 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=32.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-CC-CeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-SI-PYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-g~-~v~lie~~~~ 41 (255)
..+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46999999999999999999999 99 9999999875
No 357
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.46 E-value=0.013 Score=50.26 Aligned_cols=33 Identities=21% Similarity=0.501 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
++|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 589999999999999999999999999999875
No 358
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.45 E-value=0.0081 Score=42.81 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|||+|..|..++..|.+.|.+|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 5799999999999999999999898899998865
No 359
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=95.44 E-value=0.011 Score=47.29 Aligned_cols=33 Identities=24% Similarity=0.593 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhhh-cCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~-g~~v~~~~r~~ 219 (255)
..++|||+|.+|+.+|..+++. |.+|+++++.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999997 99999999986
No 360
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.40 E-value=0.016 Score=46.76 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+++|.|||+|..|...|..|+ .|++|+++|+.+
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 589999999999999999999 999999999865
No 361
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.39 E-value=0.013 Score=48.93 Aligned_cols=35 Identities=14% Similarity=0.179 Sum_probs=32.4
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+.+|+|||+|..|+.+|..|...|.+|+++|+..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35799999999999999999999999999999876
No 362
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.36 E-value=0.018 Score=47.81 Aligned_cols=35 Identities=14% Similarity=0.239 Sum_probs=32.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~~ 42 (255)
++|+|||||..|..++..+.+.|++|+++|.++..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 68999999999999999999999999999987754
No 363
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=95.36 E-value=0.013 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.352 Sum_probs=32.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..+|+|||+|..|..+|..|++.|.+|+++++++
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~ 44 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSS 44 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 4689999999999999999999999999999976
No 364
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.35 E-value=0.014 Score=46.96 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|+|||+|..|...|..|.+.|.+|+++++..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 589999999999999999999999999999874
No 365
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.32 E-value=0.016 Score=48.66 Aligned_cols=36 Identities=25% Similarity=0.419 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhc--CeEEEEEecCc
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSPA 220 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g--~~v~~~~r~~~ 220 (255)
.+|+|+|||+|..|+.+|..|.+++ .+|+++++++.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 3789999999999999999998886 58999999874
No 366
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.32 E-value=0.016 Score=46.78 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 589999999999999999999999999999864
No 367
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=95.30 E-value=0.016 Score=48.29 Aligned_cols=34 Identities=18% Similarity=0.376 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
+.+|+|+|||.+|+.+|..|...|. +|+++|+..
T Consensus 188 d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 188 EVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred ccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 5799999999999999999999998 999999974
No 368
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=95.29 E-value=0.021 Score=48.89 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 3689999999999999999999999999999876
No 369
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=95.29 E-value=0.013 Score=49.61 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
++|+|||+|.+|.-+|..|++.|.+|+++++++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999975
No 370
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=95.28 E-value=0.016 Score=50.19 Aligned_cols=35 Identities=29% Similarity=0.457 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...+++|||+|.+|+.+|..|.+.|.+|+++++++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 35789999999999999999999999999999986
No 371
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.27 E-value=0.021 Score=44.67 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
.++|.|||+|..|..+|..|++.|++|+++++.+.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 57999999999999999999999999999998653
No 372
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=95.27 E-value=0.043 Score=47.57 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=32.4
Q ss_pred HHhcCCCCeeEeccEEEEEEEcCCCCcEEEEEcccCCCCceeeEEEeeCEEEEeecC
Q 025254 91 VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (255)
Q Consensus 91 ~~~~~l~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~i~~d~vViAtG~ 147 (255)
+++.|+.+ +.+++|+++...+ ....+.+.++ .+ +.+|.||+|+|.
T Consensus 267 l~~~GV~v--~~~~~v~~i~~~~--~v~~v~~~~g-------~~-i~aD~Vv~a~G~ 311 (493)
T 1y56_A 267 LERWGIDY--VHIPNVKRVEGNE--KVERVIDMNN-------HE-YKVDALIFADGR 311 (493)
T ss_dssp HHHHTCEE--EECSSEEEEECSS--SCCEEEETTC-------CE-EECSEEEECCCE
T ss_pred HHhCCcEE--EeCCeeEEEecCC--ceEEEEeCCC-------eE-EEeCEEEECCCc
Confidence 44567666 8899999987543 3444555443 67 999999999994
No 373
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.22 E-value=0.017 Score=44.50 Aligned_cols=37 Identities=24% Similarity=0.356 Sum_probs=33.5
Q ss_pred CCCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 183 ~~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...+++++|||+|.+|..-+..|.+.|.+|+++.+..
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 3568999999999999999999999999999998754
No 374
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.20 E-value=0.021 Score=46.84 Aligned_cols=33 Identities=18% Similarity=0.326 Sum_probs=30.8
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 689999999999999999999998 999999875
No 375
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=95.20 E-value=0.019 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
++|.|||.|..|...|..|.+.|++|+++|+.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5899999999999999999999999999998763
No 376
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=95.19 E-value=0.016 Score=49.35 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||.|+.|+.+|..|++.|++|+.+|-++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4699999999999999999999999999999765
No 377
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=95.17 E-value=0.019 Score=47.84 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=31.6
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC-CeEEEecc
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~ 39 (255)
.+.+|+|+|+|.+|..+|..|...|. +|+++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35799999999999999999999998 79999997
No 378
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=95.13 E-value=0.016 Score=48.38 Aligned_cols=32 Identities=25% Similarity=0.459 Sum_probs=30.6
Q ss_pred eEEEEcCCcCHHHHHHHHhhh--cCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~--g~~v~~~~r~~ 219 (255)
+|+|||+|..|.-+|..|++. |.+|+++++.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 699999999999999999999 99999999976
No 379
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.12 E-value=0.017 Score=48.43 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=31.0
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 369999999999999999999999999999976
No 380
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=95.12 E-value=0.021 Score=46.82 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4699999999999999999999999999998864
No 381
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.11 E-value=0.027 Score=43.07 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|.+.|++|+++++..
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999865
No 382
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.09 E-value=0.012 Score=48.80 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=31.0
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|.-+|..|++.|.+|+++++..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999865
No 383
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=95.09 E-value=0.015 Score=49.18 Aligned_cols=32 Identities=25% Similarity=0.448 Sum_probs=30.6
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
+|+|||+|.+|.-+|..|++.|.+|+++++++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 69999999999999999999999999999976
No 384
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.08 E-value=0.022 Score=46.18 Aligned_cols=32 Identities=31% Similarity=0.497 Sum_probs=29.8
Q ss_pred eEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999998 899999865
No 385
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.05 E-value=0.022 Score=46.96 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 4 ~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 4 SKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 386
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=95.01 E-value=0.026 Score=48.56 Aligned_cols=34 Identities=26% Similarity=0.296 Sum_probs=31.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999998865
No 387
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=95.01 E-value=0.018 Score=49.22 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.1
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|.|||+|..|+.+|..|++.|++|+++|+.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 388
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=94.99 E-value=0.016 Score=47.69 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 389
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=94.98 E-value=0.015 Score=48.71 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999986
No 390
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=94.96 E-value=0.021 Score=47.18 Aligned_cols=34 Identities=35% Similarity=0.470 Sum_probs=31.1
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...|+|||+|.+|.-+|..|++.|.+|+++++..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3579999999999999999999999999999864
No 391
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=94.96 E-value=0.017 Score=48.48 Aligned_cols=33 Identities=24% Similarity=0.373 Sum_probs=31.2
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+|+|||+|..|.-+|..|++.|.+|+++++++
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~ 39 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQAR 39 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 479999999999999999999999999999976
No 392
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.95 E-value=0.027 Score=46.06 Aligned_cols=35 Identities=11% Similarity=0.043 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHH-HHHHHhhCCCCeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLA-TAACLSLQSIPYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~-~a~~l~~~g~~v~lie~~~~ 41 (255)
.++|.|||.|.+|++ +|..|.++|++|++.|....
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 478999999999996 88889999999999999763
No 393
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=94.94 E-value=0.017 Score=48.07 Aligned_cols=33 Identities=39% Similarity=0.508 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 369999999999999999999999999999875
No 394
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=94.93 E-value=0.016 Score=48.81 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999975
No 395
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=94.93 E-value=0.018 Score=48.40 Aligned_cols=33 Identities=33% Similarity=0.402 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
+.++|||+|..|+++|..+++.|.+|.++++++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 468999999999999999999999999999876
No 396
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.91 E-value=0.027 Score=44.85 Aligned_cols=36 Identities=25% Similarity=0.412 Sum_probs=33.1
Q ss_pred CCCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 184 YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 184 ~~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..+++++|||+|.+|..-+..|.+.|.+|+++....
T Consensus 11 l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 457999999999999999999999999999998764
No 397
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.91 E-value=0.025 Score=47.67 Aligned_cols=34 Identities=21% Similarity=0.334 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|||+|.+|+.++..+...|.+|+++|+..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 5799999999999999999999999999999865
No 398
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.91 E-value=0.018 Score=49.61 Aligned_cols=34 Identities=18% Similarity=0.287 Sum_probs=30.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~ 40 (255)
..+|.|||.|..|+..|..|++. |++|+++|+.+
T Consensus 5 ~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 5 IKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred ccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 36899999999999999999998 78999999864
No 399
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=94.90 E-value=0.013 Score=48.47 Aligned_cols=32 Identities=13% Similarity=0.259 Sum_probs=30.4
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.|+|||+|.+|+-+|..|++.|.+|+++++.+
T Consensus 4 dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 4 DLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 69999999999999999999999999999875
No 400
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.89 E-value=0.02 Score=48.26 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=31.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCe-EEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAK-TSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~-v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+ |+++++++
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 5799999999999999999999999 99999986
No 401
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.88 E-value=0.025 Score=46.13 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4699999999999999999999999999999875
No 402
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=94.87 E-value=0.032 Score=44.60 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.8
Q ss_pred CeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|.|||+ |..|...|..|.+.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 403
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.86 E-value=0.035 Score=44.79 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=32.4
Q ss_pred CccccCCCeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 1 MKEQAAGVEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 1 M~~~~~~~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
|.....+++|+|.|| |..|..++..|.+.|++|+++++...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 433233579999999 99999999999999999999998664
No 404
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=94.85 E-value=0.026 Score=47.19 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEec
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~ 218 (255)
...+|+|||+|.+|+-+|..|.+.|.+|++++++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4678999999999999999999999999999998
No 405
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=94.85 E-value=0.019 Score=49.77 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=30.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhhh-cCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~-g~~v~~~~r~~ 219 (255)
-.|+|||+|.+|.-+|..|+++ |.+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 3599999999999999999986 99999999987
No 406
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=94.83 E-value=0.018 Score=47.95 Aligned_cols=33 Identities=36% Similarity=0.465 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999986
No 407
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.83 E-value=0.016 Score=46.95 Aligned_cols=32 Identities=22% Similarity=0.351 Sum_probs=29.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhC-----C-CCeEEEec
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQ-----S-IPYVILER 38 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~-----g-~~v~lie~ 38 (255)
+.+|.|||+|..|...|..|++. | ++|+++++
T Consensus 8 ~m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 35899999999999999999998 9 99999988
No 408
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.82 E-value=0.02 Score=45.89 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.4
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
++|.|||.|..|...|..|++.|++|+++|+.+.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998763
No 409
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.82 E-value=0.024 Score=47.85 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=29.0
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|.|||+|..|+..|..|++ |++|+++|+.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 410
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.81 E-value=0.032 Score=47.23 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|||.|..|..+|..|.+.|.+|++||+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4679999999999999999999999999999876
No 411
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=94.79 E-value=0.02 Score=48.42 Aligned_cols=34 Identities=15% Similarity=0.433 Sum_probs=31.7
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhc-CeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g-~~v~~~~r~~ 219 (255)
..+++|||+|.+|.-+|..|.+.| .+|+++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 468999999999999999999999 8999999876
No 412
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.78 E-value=0.029 Score=45.44 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=29.7
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|+|||+|..|...|..|. .|.+|+++++..
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999998865
No 413
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=94.75 E-value=0.018 Score=47.86 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|+-+|..|++.|.+|+++++..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 414
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=94.74 E-value=0.019 Score=48.78 Aligned_cols=34 Identities=18% Similarity=0.479 Sum_probs=31.4
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...|+|||+|..|+.+|..+++.|.+|+++++.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999999987
No 415
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.73 E-value=0.029 Score=45.93 Aligned_cols=35 Identities=29% Similarity=0.359 Sum_probs=31.1
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
...+|+|||+|..|..+|..|+..+. +++++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35799999999999999999998887 899999854
No 416
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=94.73 E-value=0.019 Score=48.67 Aligned_cols=32 Identities=38% Similarity=0.531 Sum_probs=30.3
Q ss_pred eEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.|+|||+|..|+-+|..|++.|.+|+++++++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 68999999999999999999999999999865
No 417
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=94.73 E-value=0.019 Score=49.26 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcC--eEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~--~v~~~~r~~ 219 (255)
++|+|||+|.+|.-+|..|.+.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999999 999999875
No 418
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.73 E-value=0.026 Score=44.34 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
..+|+|||+|..|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999997 899999976
No 419
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.72 E-value=0.039 Score=44.93 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEecc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~ 39 (255)
..+|+|||+|..|..+|..|+..|. +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4799999999999999999999999 99999987
No 420
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=94.72 E-value=0.032 Score=46.33 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.9
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999999875
No 421
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.71 E-value=0.034 Score=46.60 Aligned_cols=35 Identities=17% Similarity=0.247 Sum_probs=32.0
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
...+|+|||+|..|+.++..+...|.+|+++|+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 36799999999999999999999999999999865
No 422
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.68 E-value=0.023 Score=49.19 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhC--CCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~ 40 (255)
.+|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 78999999854
No 423
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.68 E-value=0.033 Score=45.24 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=29.3
Q ss_pred eEEEECCCHHHHHHHHHHhhC--CCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~--g~~v~lie~~~ 40 (255)
+|+|||+|..|..+|..|++. +.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 799999999999999999985 68999999976
No 424
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.67 E-value=0.028 Score=45.23 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+.+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999998864
No 425
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.64 E-value=0.033 Score=45.35 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=29.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|||+|..|...|..|++.|.+|+++ +.+
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 478999999999999999999999999999 543
No 426
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.64 E-value=0.028 Score=45.30 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|.|||.|..|...|..|.+.|++|+++|+.+
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3689999999999999999999999999999865
No 427
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.63 E-value=0.034 Score=45.30 Aligned_cols=39 Identities=31% Similarity=0.527 Sum_probs=32.3
Q ss_pred CccccCCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 1 M~~~~~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
|+.+ ...+|+|||+|..|..+|..|...+. +++++|...
T Consensus 1 m~~~-~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNN-GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTT-TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCC-CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 6543 35799999999999999999988765 799998864
No 428
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.62 E-value=0.029 Score=44.31 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCC-eEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~-v~lie~~~ 40 (255)
..+|.|||+|..|...|..|.+.|++ |+++|+.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999998 89998864
No 429
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=94.62 E-value=0.032 Score=45.43 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhCC-CCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~ 40 (255)
.+|.|||.|..|...|..|++.| ++|+++|+.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 68999999999999999999999 9999999975
No 430
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=94.61 E-value=0.039 Score=39.57 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=31.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.++++|+|+|.+|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999974
No 431
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=94.59 E-value=0.03 Score=46.05 Aligned_cols=32 Identities=22% Similarity=0.325 Sum_probs=30.0
Q ss_pred eEEEEcCCcCHHHHHHHHhhhc------CeEEEEEecC
Q 025254 188 NVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (255)
Q Consensus 188 ~v~ViG~g~~~~e~a~~l~~~g------~~v~~~~r~~ 219 (255)
.|+|||+|.+|.-+|..|++.| .+|+++++..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999875
No 432
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.59 E-value=0.026 Score=48.02 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=31.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++.|||.|..|+.+|..|++.|++|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 589999999999999999999999999999976
No 433
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=94.58 E-value=0.043 Score=44.51 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|.+.|++|+++|+.+
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999865
No 434
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.57 E-value=0.032 Score=47.94 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=31.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|+|||+|..|...+..|.+.|.+|+++++..
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 5799999999999999999999999999999854
No 435
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.56 E-value=0.036 Score=47.91 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999875
No 436
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=94.55 E-value=0.032 Score=45.51 Aligned_cols=34 Identities=35% Similarity=0.557 Sum_probs=29.8
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
+.+|+|||+|..|..+|..|+..+. +++++|...
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 5799999999999999999998875 799998653
No 437
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.53 E-value=0.04 Score=44.74 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=30.1
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
.+|+|||+|..|..+|..|+..|. +|+++|...
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 589999999999999999999886 899999765
No 438
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.53 E-value=0.028 Score=45.88 Aligned_cols=30 Identities=27% Similarity=0.199 Sum_probs=28.9
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEec
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILER 38 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~ 38 (255)
+|.|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 439
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=94.49 E-value=0.043 Score=41.60 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=29.8
Q ss_pred eEEEEC-CCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG-~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|+||| +|..|...|..|.+.|++|+++++..
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 440
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=94.48 E-value=0.025 Score=47.29 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=30.9
Q ss_pred CeEEEEcCCcCHHHHHHHHhh-hc-CeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLAN-HA-AKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~-~g-~~v~~~~r~~ 219 (255)
..|+|||+|.+|+-+|..|++ .| .+|+++++.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 479999999999999999999 99 9999999875
No 441
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=94.48 E-value=0.034 Score=47.92 Aligned_cols=35 Identities=26% Similarity=0.498 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...+|+|||+|.+|.-+|..|.+.|.+|+++++++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 35689999999999999999999999999999876
No 442
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.47 E-value=0.045 Score=44.74 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~ 41 (255)
..+|+|||+|..|..+|..|+..+. +++++|....
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4699999999999999999999988 9999998763
No 443
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.46 E-value=0.044 Score=45.50 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+.+|+|+|+|.+|..++..|...|.+|+++|+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4799999999999999999999999999998865
No 444
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.45 E-value=0.023 Score=43.66 Aligned_cols=34 Identities=29% Similarity=0.386 Sum_probs=30.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEE-EeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVI-LEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~l-ie~~~ 40 (255)
..+|.|||+|..|...|..|.+.|++|++ +++++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 36899999999999999999999999998 77765
No 445
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=94.44 E-value=0.022 Score=48.66 Aligned_cols=33 Identities=30% Similarity=0.570 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhc------CeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g------~~v~~~~r~~ 219 (255)
.+|+|||+|.+|.-+|..|.+.| .+|+++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 57999999999999999999999 8999999975
No 446
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=94.41 E-value=0.022 Score=46.65 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=30.5
Q ss_pred CeEEEEcCCcCHHHHHHHHhh---hcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~---~g~~v~~~~r~~ 219 (255)
.+|+|||+|.+|.-+|..|.+ .|.+|+++++++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 369999999999999999999 899999999875
No 447
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.35 E-value=0.048 Score=43.32 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.1
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+.++|+|+|-.|..+|..|++.|.+|+++++..
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 5789999999999999999999999999998764
No 448
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=94.35 E-value=0.045 Score=38.65 Aligned_cols=36 Identities=19% Similarity=0.204 Sum_probs=32.9
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecCc
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPA 220 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~~ 220 (255)
..++++|+|.|..|..++..|.+.|.+|+++.+++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 356899999999999999999999999999999873
No 449
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.34 E-value=0.034 Score=45.37 Aligned_cols=32 Identities=25% Similarity=0.473 Sum_probs=29.6
Q ss_pred eEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
+|+|||+|..|..+|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 79999999999999999999998 899999864
No 450
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.32 E-value=0.051 Score=43.12 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++++|||+|-+|..++..|.+.|.+|+|+.|..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5789999999999999999999998899998865
No 451
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=94.31 E-value=0.026 Score=47.58 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=31.0
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|+.+|..+++.|.+|+++++.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999986
No 452
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.30 E-value=0.05 Score=45.31 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|+|+|+|..|..+|..|...|.+|+++|+..
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5799999999999999999999999999999865
No 453
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=94.30 E-value=0.033 Score=48.38 Aligned_cols=35 Identities=26% Similarity=0.447 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 185 ~~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
....|+|||+|.+|.-+|..|++.|.+|+++++.+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34579999999999999999999999999999976
No 454
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=94.29 E-value=0.038 Score=44.74 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=30.3
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~~ 41 (255)
..+|+|||+|..|..+|..|+..+. +++|+|....
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 4799999999999999999998888 8999998763
No 455
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=94.28 E-value=0.059 Score=41.79 Aligned_cols=41 Identities=12% Similarity=0.167 Sum_probs=31.8
Q ss_pred CccccCCCeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 1 MKEQAAGVEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 1 M~~~~~~~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
|..+...+.++|.|| |-.|..+|..|++.|.+|+++++...
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 655556678999997 67899999999999999999998753
No 456
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=94.28 E-value=0.052 Score=43.75 Aligned_cols=33 Identities=33% Similarity=0.506 Sum_probs=30.8
Q ss_pred CeEEEEC-CCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG-~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|.||| .|..|...|..|.+.|++|+++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4899999 99999999999999999999999865
No 457
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=94.27 E-value=0.025 Score=49.33 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=31.3
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhc-CeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g-~~v~~~~r~~ 219 (255)
.+|+|||+|.+|+-+|..|.+.| .+|+++++++
T Consensus 9 ~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~ 42 (516)
T 1rsg_A 9 KKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARD 42 (516)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCC
Confidence 57999999999999999999999 9999999987
No 458
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=94.26 E-value=0.065 Score=44.87 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=32.7
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..++|+|||+|..|..++..+.+.|++|+++|..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 357999999999999999999999999999998764
No 459
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=94.24 E-value=0.033 Score=47.24 Aligned_cols=33 Identities=30% Similarity=0.512 Sum_probs=31.2
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcC-eEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~-~v~~~~r~~ 219 (255)
..|+|||+|..|+-+|..|++.|. +|+++++.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 479999999999999999999999 999999986
No 460
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.23 E-value=0.063 Score=42.64 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+++|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3589999999999999999999999999999875
No 461
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.21 E-value=0.047 Score=47.16 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.7
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+++|.|||.|..|...|..|++.|++|+++++.+
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4689999999999999999999999999999865
No 462
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=94.19 E-value=0.028 Score=46.53 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+.|+|||+|.+|+-+|..|+ .|.+|+++++.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 568999999999999999999 599999999975
No 463
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=94.18 E-value=0.039 Score=47.98 Aligned_cols=34 Identities=29% Similarity=0.415 Sum_probs=31.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...|+|||+|.+|.-+|..|++.|.+|+++++.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4579999999999999999999999999999976
No 464
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.17 E-value=0.038 Score=44.87 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEecc
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~ 39 (255)
..+|.|||.|..|...|..|++.|+ +|+++|+.
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999995
No 465
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=94.16 E-value=0.039 Score=46.17 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=31.2
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+++|||+|.+|.-+|..|.+.|.+|+++++++
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecC
Confidence 479999999999999999999999999999976
No 466
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=94.14 E-value=0.039 Score=44.76 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCC--CCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g--~~v~lie~~~ 40 (255)
++|+|||+|..|..+|..|++.| .+|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 48999999999999999999988 6899999865
No 467
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=94.13 E-value=0.024 Score=48.55 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 469999999999999999999999999999986
No 468
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=94.13 E-value=0.044 Score=48.68 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=32.0
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 4689999999999999999999999999999984
No 469
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=94.13 E-value=0.047 Score=43.74 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=30.1
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999865
No 470
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=94.13 E-value=0.051 Score=43.17 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=29.8
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|.|||+|..|...|..|.+.|++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998864
No 471
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.11 E-value=0.035 Score=46.77 Aligned_cols=33 Identities=24% Similarity=0.339 Sum_probs=30.7
Q ss_pred CeEEEEcCCcCHHHHHHHHhhh--cCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~--g~~v~~~~r~~ 219 (255)
..|+|||+|.+|+-+|..|++. |.+|+++++..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 4699999999999999999999 99999999864
No 472
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.10 E-value=0.058 Score=45.06 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=31.9
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
...+|+|||+|..|..+|..+...|.+|+++|+..
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 35799999999999999999999999999999865
No 473
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.07 E-value=0.059 Score=46.54 Aligned_cols=34 Identities=9% Similarity=0.178 Sum_probs=32.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||.|..|...|..|++.|++|+++|+.+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999976
No 474
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=94.07 E-value=0.032 Score=48.83 Aligned_cols=33 Identities=39% Similarity=0.613 Sum_probs=31.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|.-+|..|++.|.+|+++++++
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 475
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=94.06 E-value=0.032 Score=46.36 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=30.2
Q ss_pred eEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 476
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=94.04 E-value=0.044 Score=48.01 Aligned_cols=34 Identities=29% Similarity=0.445 Sum_probs=31.3
Q ss_pred CCeEEEEcCCcCHHHHHHHHhh---hcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~---~g~~v~~~~r~~ 219 (255)
..+|+|||+|..|.-+|..|++ .|.+|+++++.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 3589999999999999999999 899999999964
No 477
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=94.03 E-value=0.045 Score=38.20 Aligned_cols=34 Identities=21% Similarity=0.397 Sum_probs=30.8
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..+++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999875
No 478
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.02 E-value=0.055 Score=48.84 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=31.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
...|+|||+|..|+-+|..|++.|.+|+++++.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 3689999999999999999999999999999864
No 479
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.01 E-value=0.071 Score=45.19 Aligned_cols=36 Identities=19% Similarity=0.228 Sum_probs=32.5
Q ss_pred CCCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccCC
Q 025254 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (255)
Q Consensus 6 ~~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~~ 41 (255)
..++|+|+|+|..|..++..+.+.|++|+++|..+.
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 357999999999999999999999999999997654
No 480
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=93.97 E-value=0.054 Score=47.60 Aligned_cols=34 Identities=26% Similarity=0.370 Sum_probs=31.5
Q ss_pred CCeEEEEcCCcCHHHHHHHHhh---hcCeEEEEEecC
Q 025254 186 GKNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (255)
Q Consensus 186 ~~~v~ViG~g~~~~e~a~~l~~---~g~~v~~~~r~~ 219 (255)
..+|+|||+|..|.-+|..|++ .|.+|+++++.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 61 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPD 61 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCC
Confidence 4689999999999999999999 899999999864
No 481
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.97 E-value=0.063 Score=43.29 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=31.0
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~ 40 (255)
.++++|||+|.+|..+|..|.+.|. +|++++|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 5789999999999999999999997 899998864
No 482
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=93.97 E-value=0.03 Score=48.81 Aligned_cols=33 Identities=30% Similarity=0.358 Sum_probs=31.3
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
.+|+|||+|.+|.-+|..|.+.|.+|+++++++
T Consensus 5 ~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~ 37 (520)
T 1s3e_A 5 CDVVVVGGGISGMAAAKLLHDSGLNVVVLEARD 37 (520)
T ss_dssp CSEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 579999999999999999999999999999986
No 483
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.96 E-value=0.037 Score=48.05 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=29.6
Q ss_pred CeEEEEcCCcCHHHHHHHHhh---hcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~---~g~~v~~~~r~~ 219 (255)
.+|+|||+|..|.-+|..|++ .|.+|+++++.+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 479999999999999999999 999999999875
No 484
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.96 E-value=0.039 Score=46.04 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhCC-------CCeEEEeccCC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQS-------IPYVILERENC 41 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g-------~~v~lie~~~~ 41 (255)
.+|.|||+|..|...|..|++.| ++|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999998 99999998764
No 485
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=93.96 E-value=0.037 Score=48.70 Aligned_cols=33 Identities=36% Similarity=0.620 Sum_probs=31.2
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|.+|.-+|..|++.|.+|+++++.+
T Consensus 27 ~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~ 59 (549)
T 2r0c_A 27 TDVLILGGGPVGMALALDLAHRQVGHLVVEQTD 59 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 479999999999999999999999999999986
No 486
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.95 E-value=0.066 Score=43.68 Aligned_cols=35 Identities=20% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCC-CeEEEeccCC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~-~v~lie~~~~ 41 (255)
..+|+|||+|..|.++|..|+..+. +++++|..+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 4689999999999999999998887 9999998763
No 487
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.95 E-value=0.059 Score=42.75 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
+++|+|.|+|..|..++..|.+.|++|+++.+..
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999999865
No 488
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=93.95 E-value=0.068 Score=48.65 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=31.5
Q ss_pred CCeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
..+|.|||+|..|...|..|++.|++|+++|+.+
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999865
No 489
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.91 E-value=0.049 Score=41.60 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.2
Q ss_pred CCeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|+|.|| |..|..++..|.+.|++|+++++..
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 368999996 9999999999999999999999875
No 490
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.91 E-value=0.061 Score=46.51 Aligned_cols=33 Identities=9% Similarity=0.194 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|.|||+|..|...|..|++.|++|+++++.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999865
No 491
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.91 E-value=0.053 Score=44.18 Aligned_cols=36 Identities=28% Similarity=0.469 Sum_probs=30.8
Q ss_pred cCCCeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 5 AAGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 5 ~~~~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
+...+|+|||+|..|..++..|...+. +++++|...
T Consensus 3 ~~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 3 PNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TTBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 345799999999999999999998776 799998753
No 492
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=93.90 E-value=0.037 Score=48.20 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=31.1
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..|+|||+|..|.-+|..|++.|.+|+++++.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999986
No 493
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.90 E-value=0.06 Score=43.79 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.9
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
.+|.|||.|..|...|..|.+.|+ +|+++|+.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 689999999999999999999999 899999865
No 494
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.90 E-value=0.052 Score=43.27 Aligned_cols=32 Identities=25% Similarity=0.436 Sum_probs=29.5
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
++|.|||+|..|...|..|.+ |++|+++++.+
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 379999999999999999999 99999999865
No 495
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.89 E-value=0.049 Score=42.83 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.7
Q ss_pred eEEEECCCHHHHHHHHHHhhCC-CCeEEEeccC
Q 025254 9 EVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (255)
Q Consensus 9 ~vvIIG~G~~Gl~~a~~l~~~g-~~v~lie~~~ 40 (255)
+|.|||+|..|...|..|.+.| ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 8999998864
No 496
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=93.89 E-value=0.035 Score=47.58 Aligned_cols=33 Identities=18% Similarity=0.214 Sum_probs=31.4
Q ss_pred CeEEEEcCCcCHHHHHHHHhhhcCeEEEEEecC
Q 025254 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (255)
Q Consensus 187 ~~v~ViG~g~~~~e~a~~l~~~g~~v~~~~r~~ 219 (255)
..++|||+|..|.-+|..|++.|.+|+++++++
T Consensus 12 ~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~ 44 (453)
T 2bcg_G 12 YDVIVLGTGITECILSGLLSVDGKKVLHIDKQD 44 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999986
No 497
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=93.89 E-value=0.075 Score=39.70 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=30.8
Q ss_pred CeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
++|+|+|| |..|..++..|.+.|++|+++++..
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 68999999 9999999999999999999999865
No 498
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.88 E-value=0.065 Score=41.26 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=31.7
Q ss_pred CCeEEEECC-CHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 7 GVEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 7 ~~~vvIIG~-G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.++|+|.|| |..|..++..|++.|++|+++.+..
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 578999998 9999999999999999999999865
No 499
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.88 E-value=0.064 Score=46.57 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=31.3
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCCCeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~~v~lie~~~ 40 (255)
.+|.|||.|..|..+|..|++.|++|+++++.+
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999876
No 500
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.88 E-value=0.061 Score=42.77 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.0
Q ss_pred CeEEEECCCHHHHHHHHHHhhCCC--CeEEEeccC
Q 025254 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (255)
Q Consensus 8 ~~vvIIG~G~~Gl~~a~~l~~~g~--~v~lie~~~ 40 (255)
++|.|||+|..|...|..|.+.|+ +|+++|+.+
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 479999999999999999999998 899998864
Done!