Citrus Sinensis ID: 025259

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-----
Protein Sequence
MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL
Secondary Structure (PSIPRED)
cccccccccccccEEEEEccccHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHcccHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccccEEEEcccccccc
Secondary Structure Prediction (SSPRO)
cccccccccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccHHHcccccccHHHHHHHHHHHHHHHHHHHHcHHHcEEEEEccccccccccHHHccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccccEEEEEcccEEEcc
Coil and Loop (DISEMBL)
MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQdaaphmqkgsSVVFISSiagyqppsamamYGVTKTALLGLTKALAaemapdtrvncvapgfvptHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAsddasyitGETLVVAGGMASRL
Flexible Loop (DISEMBL)
mekvnmakrfqgkvavVTASTQGIGLGVAERLGLEGASVvissrkqknvdKAVEKLKALGIEVIGIichvsneqhrkNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL
Low Complexity Region (SEG)
MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVtktallgltkalaaEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMaaaiaflasddasYITGETLVVAGGMASRL
Disordered region (IsUnstruct)
*********FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG******
Disordered Region (DISOPRED)
***********GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR*
Disordered Region (DISEMBL)
*********FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL
Disordered Region (DISPRO)
********RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	255	2.2.26 [Sep-21-2011]
Q8WNV7	279	Dehydrogenase/reductase S	yes	no	0.988	0.903	0.466	1e-61
Q9GKX2	260	Dehydrogenase/reductase S	yes	no	0.952	0.934	0.5	3e-60
Q5RCF8	278	Dehydrogenase/reductase S	yes	no	1.0	0.917	0.469	6e-60
Q9BTZ2	278	Dehydrogenase/reductase S	yes	no	1.0	0.917	0.465	1e-59
Q8SPU8	279	Dehydrogenase/reductase S	yes	no	1.0	0.913	0.461	2e-59
Q8VID1	279	Dehydrogenase/reductase S	yes	no	0.952	0.870	0.471	4e-58
Q13268	258	Dehydrogenase/reductase S	no	no	0.949	0.937	0.465	4e-58
Q99LB2	279	Dehydrogenase/reductase S	yes	no	0.952	0.870	0.467	9e-58
P0CG22	281	Putative dehydrogenase/re	no	no	0.952	0.864	0.413	2e-47
Q6PKH6	230	Dehydrogenase/reductase S	no	no	0.713	0.791	0.475	1e-40

>sp|Q8WNV7|DHRS4_PIG Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=2

 Score =  236 bits (602), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 119/255 (46%), Positives = 169/255 (66%), Gaps = 3/255 (1%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           V   K  + KVA+VTAST GIGL +A RL  +GA VV+SSRKQ+NVD+ V  L+  G+ V
Sbjct: 25  VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV 84

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
            G +CHV   + R+ L+   V  +G +D+ V NAAVNP+  +++   E V DK+  +NVK
Sbjct: 85  TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 144

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           +++L+ +   P M+K  G SV+ +SS+  Y P   +  Y V+KTALLGLTK LA E+AP 
Sbjct: 145 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 204

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           + RVNC+APG + T+F+Q L  + A ++ ++    + RLG   + A  ++FL S+DASYI
Sbjct: 205 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYI 264

Query: 241 TGETLVVAGGMASRL 255
           TGET+VV GG ASRL
Sbjct: 265 TGETVVVGGGTASRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.
Sus scrofa (taxid: 9823)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 8EC: 4

>sp|Q9GKX2|DHRS4_RABIT Dehydrogenase/reductase SDR family member 4 (Fragment) OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1

 Score =  231 bits (590), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/246 (50%), Positives = 165/246 (67%), Gaps = 3/246 (1%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VTAST GIGL +A RL  +GA VVISSRKQ+NVD+AV  L+A G+ V G +CHV  
Sbjct: 15  KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGK 74

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            + R+ L+   +  +G ID+ V NAAVNP+   L+   E V DK+ +INVK+  L+ +  
Sbjct: 75  AEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAV 134

Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P M+K  G SVV ++SIA + P S +  Y V+KTAL+GLTK LA E+A  + RVNC+AP
Sbjct: 135 VPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAP 194

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           G + T F++AL  + A  + +  K  + RLG     A  ++FL S+DASYITGET+VVAG
Sbjct: 195 GLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAG 254

Query: 250 GMASRL 255
           G  SRL
Sbjct: 255 GAPSRL 260

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Oryctolagus cuniculus (taxid: 9986)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q5RCF8|DHRS4_PONAB Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=3

 Score =  230 bits (587), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 122/260 (46%), Positives = 166/260 (63%), Gaps = 5/260 (1%)

Query: 1   MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M    M +R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G+ V G +CHV   + R+ L+   V+ +G ID+ V NAAVNP+   L+   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTL 138

Query: 119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           +INVK+  L+ +   P M+K  G SVV +SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E+AP + RVNC+APG + T F++ L  +    ++++    + RLG   + A  ++FL S+
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query: 236 DASYITGETLVVAGGMASRL 255
           DASYITGET+VV GG  SRL
Sbjct: 259 DASYITGETVVVGGGTPSRL 278

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q9BTZ2|DHRS4_HUMAN Dehydrogenase/reductase SDR family member 4 OS=Homo sapiens GN=DHRS4 PE=1 SV=3

 Score =  229 bits (585), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 166/260 (63%), Gaps = 5/260 (1%)

Query: 1   MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M    M +R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  L+ 
Sbjct: 19  MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G+ V G +CHV   + R+ L+   V+ +G ID+ V NAAVNP+   ++   E V DK  
Sbjct: 79  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query: 119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           +INVK+  L+ +   P M+K  G SVV +SSIA + P    + Y V+KTALLGLTK LA 
Sbjct: 139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query: 177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E+AP + RVNC+APG + T F++ L  +    ++++    + RLG   + A  ++FL S+
Sbjct: 199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query: 236 DASYITGETLVVAGGMASRL 255
           DASYITGET+VV GG  SRL
Sbjct: 259 DASYITGETVVVGGGTPSRL 278

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8SPU8|DHRS4_BOVIN Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=2

 Score =  228 bits (582), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 120/260 (46%), Positives = 169/260 (65%), Gaps = 5/260 (1%)

Query: 1   MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M    MA+R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  LK 
Sbjct: 20  MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G+ V G +CHV   + R+ L+   V+ +G +D+ + NAAV+P+   L+   E V DK+ 
Sbjct: 80  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query: 119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           ++NVK++ LL +   P M K  G S+V +SSIA Y P  ++  Y V+KTALLGLTK LA 
Sbjct: 140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query: 177 EMA-PDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E+A  + RVNC+APG + T F++ L  + A +++++    + R+G     A  ++FL S+
Sbjct: 200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query: 236 DASYITGETLVVAGGMASRL 255
           DASYITGET+VVAGG  S L
Sbjct: 260 DASYITGETVVVAGGSLSHL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q8VID1|DHRS4_RAT Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=2

 Score =  224 bits (572), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 116/246 (47%), Positives = 164/246 (66%), Gaps = 3/246 (1%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VTAST GIGL +A RL  +GA VVISSRKQ+NVD+AV  L+  G+ V G++CHV  
Sbjct: 34  KVALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGK 93

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            + R+ L++  ++ +  ID+ V NAAVNP+  +L+   E V +K+  INV +S ++++  
Sbjct: 94  AEDREKLVNMALKLHQGIDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAV 153

Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P M+K  G SVV +SS+AG+    ++  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPAMEKRGGGSVVIVSSVAGFVLFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           G + THF+  L    A  + ++    + RLG   +    ++FL S+DASYI GET+VV G
Sbjct: 214 GLIKTHFSSVLWKEKAREEMIKETMQIRRLGKPEDCVGIVSFLCSEDASYINGETVVVGG 273

Query: 250 GMASRL 255
           G  SRL
Sbjct: 274 GTPSRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|Q13268|DHRS2_HUMAN Dehydrogenase/reductase SDR family member 2 OS=Homo sapiens GN=DHRS2 PE=1 SV=3

 Score =  224 bits (571), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 114/245 (46%), Positives = 160/245 (65%), Gaps = 3/245 (1%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VAVVT ST GIG  +A RL  +GA VVISSRKQ+NVD+A+ KL+  G+ V GI+CHV  
Sbjct: 15  RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 74

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            + R+ L+ K +E  G +D  V +A VNP     L T E + DK+  +NVKS  LL+   
Sbjct: 75  AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 134

Query: 133 APHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
            P+M+ +  +V+ +SSIA Y P  A+ +Y V+KTALLGLT+ LA E+AP D RVNCV PG
Sbjct: 135 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 194

Query: 191 FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
            + T F++   GN+++ K  +    L R+G + + A  ++FL S DASY+ GE + VA G
Sbjct: 195 IIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVA-G 253

Query: 251 MASRL 255
            ++RL
Sbjct: 254 YSTRL 258

Displays NADPH-dependent dicarbonyl reductase activity in vitro with 3,4-Hexanedione, 2,3-Heptanedione and 1-Phenyl-1,2-propanedione as substrates. No reductase activity is displayed in vitro with steroids, retinoids and sugars as substrates. May inhibit cell replication.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q99LB2|DHRS4_MOUSE Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=3

 Score =  223 bits (569), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 115/246 (46%), Positives = 161/246 (65%), Gaps = 3/246 (1%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  L+  G+ V GI+CHV  
Sbjct: 34  KVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGK 93

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            + R+ LI   ++++  ID+ V NAAVNP+  +L+   E V DK+  INV ++ ++++  
Sbjct: 94  AEDREKLITTALKRHQGIDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAV 153

Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P M+K  G SVV + S+AG+    ++  Y V+KTALLGLTK  AAE+AP + RVNC+AP
Sbjct: 154 VPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAP 213

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           G + T F+  L    A    ++    + RLG   + A  ++FL S+DASYI GET+VV G
Sbjct: 214 GLIKTRFSSVLWEEKAREDFIKEAMQIRRLGKPEDCAGIVSFLCSEDASYINGETVVVGG 273

Query: 250 GMASRL 255
           G  SRL
Sbjct: 274 GTPSRL 279

Reduces all-trans-retinal and 9-cis retinal. Can also catalyze the oxidation of all-trans-retinol with NADP as co-factor, but with much lower efficiency. Reduces alkyl phenyl ketones and alpha-dicarbonyl compounds with aromatic rings, such as pyrimidine-4-aldehyde, 3-benzoylpyridine, 4-benzoylpyridine, menadione and 4-hexanoylpyridine. Has no activity towards aliphatic aldehydes and ketones.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 8

EC: 4

>sp|P0CG22|DR4L1_HUMAN Putative dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L1 PE=5 SV=1

 Score =  189 bits (480), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 156/249 (62%), Gaps = 6/249 (2%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VTAST  IG  VA+RL  +GA VV+S RKQ+NVD+AV  L+  G+ + G +CHV  
Sbjct: 33  KVALVTASTDWIGFAVAQRLAQDGAHVVVSRRKQQNVDQAVATLQGEGLSMTGTVCHVGK 92

Query: 73  EQHRKNLIDKTVEKYGRIDVFVL---NAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            +  + L+   ++ +G ID+  L   N+    +   LL+T E   D+  +IN K+  L++
Sbjct: 93  MKDWERLVATAMKLHGVIDILSLSITNSKRGLFWFTLLQTAEEAWDRNLDINGKALALMI 152

Query: 130 QDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +   P M+K  G SV F++S+A ++P    + Y V+KTALLGL K LA E+AP + RVNC
Sbjct: 153 KAVVPEMEKRGGGSVGFLASVAAFRPLPGFSPYNVSKTALLGLNKTLAIELAPRNIRVNC 212

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           +APG + T F++ L  +    ++++    + RLG   +    ++FL S+DASY+TGET++
Sbjct: 213 LAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDSLGIVSFLCSEDASYLTGETVM 272

Query: 247 VAGGMASRL 255
           V GG  SRL
Sbjct: 273 VGGGTPSRL 281

Putative oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

>sp|Q6PKH6|DR4L2_HUMAN Dehydrogenase/reductase SDR family member 4-like 2 OS=Homo sapiens GN=DHRS4L2 PE=2 SV=1

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/187 (47%), Positives = 119/187 (63%), Gaps = 5/187 (2%)

Query: 6   MAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           M +R     KVA+VTAST GIG  +A RL  + A VV+SSRKQ+NVD+AV  L+  G+ V
Sbjct: 22  MTRRDPLTNKVALVTASTDGIGFAIARRLAQDRAHVVVSSRKQQNVDQAVATLQGEGLSV 81

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
            G +CHV   + R+ L+   V+ +G ID+ V NAAVNP+   L+   E V DK  +INVK
Sbjct: 82  TGTVCHVGKAEDRERLVAMAVKLHGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVK 141

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           +  L+ +   P M+K  G SVV +SSIA + P    + Y V+KTALLGL   LA E+AP 
Sbjct: 142 APALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLNNTLAIELAPR 201

Query: 181 DTRVNCV 187
           + RVNC+
Sbjct: 202 NIRVNCL 208

Probable oxidoreductase.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 1

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
449455366	255	PREDICTED: dehydrogenase/reductase SDR f	0.980	0.980	0.772	1e-110
388514295	252	unknown [Lotus japonicus]	0.988	1.0	0.757	1e-109
224113857	256	predicted protein [Populus trichocarpa]	0.992	0.988	0.735	1e-108
380039554	258	tropinone reductase-like 3 [Erythroxylum	1.0	0.988	0.740	1e-107
351724665	252	peroxisomal short-chain dehydrogenase/re	0.972	0.984	0.758	1e-107
224113853	256	predicted protein [Populus trichocarpa]	0.992	0.988	0.735	1e-106
297813813	254	short-chain dehydrogenase/reductase fami	0.996	1.0	0.745	1e-106
18412959	254	dehydrogenase/reductase SDR family membe	0.996	1.0	0.741	1e-106
255554739	253	short-chain dehydrogenase, putative [Ric	0.980	0.988	0.772	1e-105
357480421	252	Dehydrogenase/reductase SDR family membe	0.988	1.0	0.730	1e-104

>gi|449455366|ref|XP_004145424.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus] gi|449531127|ref|XP_004172539.1| PREDICTED: dehydrogenase/reductase SDR family member 4-like [Cucumis sativus]

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 193/250 (77%), Positives = 220/250 (88%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           + KRF+GKVA+VTASTQGIG  +A RL  EGASVVISSR+Q+NVD+AVEKLKA G+EV+G
Sbjct: 6   IGKRFEGKVAIVTASTQGIGFEIARRLAFEGASVVISSRRQRNVDEAVEKLKAQGLEVLG 65

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           I+CHVSN Q RKNL++KT++KYG+IDV V NAAVNP    +LKTKESVLDKLW+INVK+S
Sbjct: 66  IVCHVSNAQQRKNLVEKTIQKYGKIDVVVSNAAVNPSVDSILKTKESVLDKLWDINVKAS 125

Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           +LL+QD APH+QKGSSVV ISSI GY P S +AMYGVTKTALLGLTKALAAEMAPDTRVN
Sbjct: 126 VLLLQDVAPHLQKGSSVVLISSIEGYNPSSLLAMYGVTKTALLGLTKALAAEMAPDTRVN 185

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           CVAPGFVPTHFA  L+ N+A+RK +E KTLLNRLGTT +MAAA AFLASDDASYITGE L
Sbjct: 186 CVAPGFVPTHFADFLVTNEAIRKGVESKTLLNRLGTTEDMAAATAFLASDDASYITGEIL 245

Query: 246 VVAGGMASRL 255
           VVAGGM SRL
Sbjct: 246 VVAGGMPSRL 255

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388514295|gb|AFK45209.1| unknown [Lotus japonicus]

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 191/252 (75%), Positives = 220/252 (87%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           + + KRF+GKVA+VTASTQG G  +AERLGLEGASVVISSRKQ+NVD A EKL+A GI+V
Sbjct: 1   MEIPKRFRGKVAIVTASTQGTGFSIAERLGLEGASVVISSRKQQNVDAAAEKLRAKGIDV 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           + ++CHVSN Q RKNLIDKTV+KYG+IDV V NAA NP    +L+TK++VLDKLWEINVK
Sbjct: 61  LAVVCHVSNAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDTVLDKLWEINVK 120

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
           +SILL++DAAPHMQKGSSVV ISSIAGY PP AMAMYGVTKTALLGLTKALA EMAP+TR
Sbjct: 121 ASILLLKDAAPHMQKGSSVVIISSIAGYNPPPAMAMYGVTKTALLGLTKALAGEMAPNTR 180

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VNCVAPGFVPT+FA  +  NDA+R+ LEGKT+L RLGTT +M AA AFLAS+DASYITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNDAMRQELEGKTILGRLGTTEDMGAATAFLASEDASYITGE 240

Query: 244 TLVVAGGMASRL 255
           TLVV+GGM SRL
Sbjct: 241 TLVVSGGMPSRL 252

Source: Lotus japonicus

Species: Lotus japonicus

Genus: Lotus

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113857|ref|XP_002316593.1| predicted protein [Populus trichocarpa] gi|118487888|gb|ABK95766.1| unknown [Populus trichocarpa] gi|222859658|gb|EEE97205.1| predicted protein [Populus trichocarpa]

 Score =  396 bits (1017), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 186/253 (73%), Positives = 217/253 (85%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           K+   KRF+GKV +VTASTQGIG  +AER GLEGASVVISSRKQKNVD+A EKLKA GI+
Sbjct: 4   KIISGKRFEGKVVIVTASTQGIGFSIAERFGLEGASVVISSRKQKNVDEAAEKLKAKGIK 63

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           V+G++CHVSN Q RKNLI+ TV+KYG+ID+ V NAAVNP    +L+T+ESVLDKLWEINV
Sbjct: 64  VLGVVCHVSNAQQRKNLIETTVQKYGKIDIVVSNAAVNPSTDSILETQESVLDKLWEINV 123

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           K++ILL++DA PHM+KGSSV+ ISSI GY P S+MAMYGVTKTAL GLTK LAAEMAP T
Sbjct: 124 KAAILLLKDATPHMKKGSSVILISSIGGYHPHSSMAMYGVTKTALFGLTKVLAAEMAPHT 183

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVNC+APGFVPTHFA  + GN  +RK +E +TLL RLGTT +MA+A+AFLASDDASYITG
Sbjct: 184 RVNCIAPGFVPTHFADFITGNQTIRKTIEDQTLLKRLGTTDDMASAVAFLASDDASYITG 243

Query: 243 ETLVVAGGMASRL 255
           ETLVVAGGM SRL
Sbjct: 244 ETLVVAGGMPSRL 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380039554|gb|AFD32321.1| tropinone reductase-like 3 [Erythroxylum coca]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 191/258 (74%), Positives = 221/258 (85%), Gaps = 3/258 (1%)

Query: 1   MEKVN---MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK 57
           MEK +   + +RF+GKVA+VTASTQGIG  +A RLGLEGA+VVISSRKQKNVD+AVEKLK
Sbjct: 1   MEKTSKKMIGRRFEGKVAIVTASTQGIGFAIAYRLGLEGAAVVISSRKQKNVDEAVEKLK 60

Query: 58  ALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
           A GIEV+G++CHVSN + RKNLID TV+KYG+IDV V NAA NP    LL+T+ESVLDK+
Sbjct: 61  AQGIEVLGVVCHVSNSKQRKNLIDTTVKKYGKIDVVVSNAAANPSTDALLETQESVLDKI 120

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           WEINVK+SILL+Q+AAPH+QKGSSVV ISSI GYQPP++MAMYGVTKTALLGLTKALA E
Sbjct: 121 WEINVKASILLLQEAAPHLQKGSSVVLISSITGYQPPASMAMYGVTKTALLGLTKALAEE 180

Query: 178 MAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           MAP  RVNCVAPGFVPT+FA  L  N+ +R +LE KT L RLGTT +MA+A AFLASDDA
Sbjct: 181 MAPYVRVNCVAPGFVPTNFADYLTRNEDIRNSLEEKTFLKRLGTTQDMASATAFLASDDA 240

Query: 238 SYITGETLVVAGGMASRL 255
           SYITGET+VVAGG  SRL
Sbjct: 241 SYITGETVVVAGGTPSRL 258

Source: Erythroxylum coca

Species: Erythroxylum coca

Genus: Erythroxylum

Family: Erythroxylaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|351724665|ref|NP_001238345.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max] gi|167962017|dbj|BAG09366.1| peroxisomal short-chain dehydrogenase/reductase family protein [Glycine max]

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 188/248 (75%), Positives = 219/248 (88%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           KRF+GKVA+VTASTQGIGL +AERLGLEGASVVISSRKQ+NVD A E+L+A GI+V+G++
Sbjct: 5   KRFEGKVAIVTASTQGIGLAIAERLGLEGASVVISSRKQQNVDAAAEQLRAKGIQVLGVV 64

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           CHVS+ Q RKNLIDKTV+KYG+IDV V NAA NP    +L+TK+SVLDKLWEINVK++IL
Sbjct: 65  CHVSSAQQRKNLIDKTVQKYGKIDVVVSNAAANPSVDAILQTKDSVLDKLWEINVKATIL 124

Query: 128 LMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           L++DA PH+QKGSSVV ISSIAG+ PP ++AMYGVTKTALLGLTKALAAEMAP+TRVNCV
Sbjct: 125 LLKDAVPHLQKGSSVVIISSIAGFNPPPSLAMYGVTKTALLGLTKALAAEMAPNTRVNCV 184

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APGFVPT+FA  +  NDAV+K LE KTLL RLGTT +M AA AFLASDDA+YITGET+VV
Sbjct: 185 APGFVPTNFASFITSNDAVKKELEEKTLLGRLGTTEDMGAAAAFLASDDAAYITGETIVV 244

Query: 248 AGGMASRL 255
           AGG  SRL
Sbjct: 245 AGGTPSRL 252

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113853|ref|XP_002316592.1| predicted protein [Populus trichocarpa] gi|222859657|gb|EEE97204.1| predicted protein [Populus trichocarpa]

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 186/253 (73%), Positives = 217/253 (85%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           K+   KRF+G+V +VTASTQGIG   AER GLEGASVVISSRKQKNVD+AVEKLKA GI+
Sbjct: 4   KIISGKRFEGRVVIVTASTQGIGFSTAERFGLEGASVVISSRKQKNVDEAVEKLKAKGIK 63

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           V+G+ICHVSN Q RKNLI+ TV+KYG+IDV V NAAV+P +   L+T ESVLDKLWEINV
Sbjct: 64  VVGVICHVSNAQQRKNLIETTVQKYGKIDVVVSNAAVSPSSDSTLETHESVLDKLWEINV 123

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           K++ILL++DAAPHM+KGSSV+ ISSI GY    ++AMYGVTKTAL GLTK LAAEMAP T
Sbjct: 124 KAAILLLKDAAPHMKKGSSVILISSIGGYHVHDSLAMYGVTKTALFGLTKVLAAEMAPHT 183

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVNC+APGFVPTHF   + GN A++K++E KTLLNRLGTT +MA+A+AFLASDDASYITG
Sbjct: 184 RVNCIAPGFVPTHFTSFIAGNQALKKSIEDKTLLNRLGTTDDMASAVAFLASDDASYITG 243

Query: 243 ETLVVAGGMASRL 255
           ETLVVAGGM SRL
Sbjct: 244 ETLVVAGGMPSRL 256

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813813|ref|XP_002874790.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] gi|297320627|gb|EFH51049.1| short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 190/255 (74%), Positives = 221/255 (86%), Gaps = 1/255 (0%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           MEK  + +R +GKVA+VTASTQGIG G+ ER GLEGASVV+SSRKQ NVD+AV KLK+ G
Sbjct: 1   MEK-KLPRRLEGKVAIVTASTQGIGFGIIERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
           I+  GI+CHVSN QHR+NL++KTV+KYG+ID+ V NAA NP    +L +KE+VLDKLWEI
Sbjct: 60  IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           NVKSSILL+QD APH++KGSSV+FI+SIAG+QP  AMAMYGVTKTALLGLTKALAAEMAP
Sbjct: 120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFQPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           DTRVN VAPGFVPTHFA  + G+  VR+ +E KTLLNRLGTTG+MAAA AFLASDD+SYI
Sbjct: 180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query: 241 TGETLVVAGGMASRL 255
           TGETLVVAGGM SRL
Sbjct: 240 TGETLVVAGGMPSRL 254

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412959|ref|NP_567300.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana] gi|5732060|gb|AAD48959.1|AF147263_1 contains similarity to Pfam families PF00106 (short chain dehydrogenase; score=151.7, E=1.3e-41, N=1) and PF00678 (Short chain dehydrogenase/reductase C-terminus; score=48.9, E=1.1e-10, N=1) [Arabidopsis thaliana] gi|7267313|emb|CAB81095.1| AT4g05530 [Arabidopsis thaliana] gi|14334866|gb|AAK59611.1| unknown protein [Arabidopsis thaliana] gi|21281153|gb|AAM44948.1| unknown protein [Arabidopsis thaliana] gi|21593394|gb|AAM65343.1| putative tropinone reductase [Arabidopsis thaliana] gi|332657132|gb|AEE82532.1| dehydrogenase/reductase SDR family member 4 [Arabidopsis thaliana]

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 189/255 (74%), Positives = 220/255 (86%), Gaps = 1/255 (0%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           MEK  + +R +GKVA+VTASTQGIG G+ ER GLEGASVV+SSRKQ NVD+AV KLK+ G
Sbjct: 1   MEK-KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
           I+  GI+CHVSN QHR+NL++KTV+KYG+ID+ V NAA NP    +L +KE+VLDKLWEI
Sbjct: 60  IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           NVKSSILL+QD APH++KGSSV+FI+SIAG+ P  AMAMYGVTKTALLGLTKALAAEMAP
Sbjct: 120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           DTRVN VAPGFVPTHFA  + G+  VR+ +E KTLLNRLGTTG+MAAA AFLASDD+SYI
Sbjct: 180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query: 241 TGETLVVAGGMASRL 255
           TGETLVVAGGM SRL
Sbjct: 240 TGETLVVAGGMPSRL 254

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255554739|ref|XP_002518407.1| short-chain dehydrogenase, putative [Ricinus communis] gi|223542252|gb|EEF43794.1| short-chain dehydrogenase, putative [Ricinus communis]

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 193/250 (77%), Positives = 225/250 (90%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           +AKRF+GKVA+VTASTQGIG  +A RL LEGAS+V+SSRKQKNVD+AVEKL+A GI+V+G
Sbjct: 4   LAKRFEGKVALVTASTQGIGFAIARRLALEGASLVVSSRKQKNVDEAVEKLQAEGIQVLG 63

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           ++CHVSN QHRK+LI KTVE+YG+IDV V NAA NP    +LKT+ESVLDKLWEINVK+S
Sbjct: 64  VVCHVSNAQHRKHLIHKTVERYGKIDVIVSNAAANPSTEAILKTQESVLDKLWEINVKAS 123

Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           ILL+QDAAP++QKGSSV+ +SSI+GY PP++MAMYGVTKTALLGLTKALAAEMAPDTRVN
Sbjct: 124 ILLLQDAAPYLQKGSSVILVSSISGYSPPASMAMYGVTKTALLGLTKALAAEMAPDTRVN 183

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           C+APGFVPTHFA  L  N+AVRK++E KT LNRLGTT +MAAA AFLASD+ASYITGETL
Sbjct: 184 CIAPGFVPTHFADFLTKNEAVRKSIEEKTFLNRLGTTQDMAAAAAFLASDEASYITGETL 243

Query: 246 VVAGGMASRL 255
           VVAGGM SRL
Sbjct: 244 VVAGGMTSRL 253

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357480421|ref|XP_003610496.1| Dehydrogenase/reductase SDR family member [Medicago truncatula] gi|355511551|gb|AES92693.1| Dehydrogenase/reductase SDR family member [Medicago truncatula]

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 184/252 (73%), Positives = 216/252 (85%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           + + KRF+GKVA+VTASTQGIG  +AERLGLEGASVVISSR+QKNVD A EKL+A GI+V
Sbjct: 1   MEIPKRFKGKVAIVTASTQGIGFTIAERLGLEGASVVISSRRQKNVDVAAEKLRAKGIDV 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
             ++CHVSN   RK+LIDKTV+KYG+IDV V NAA NP    +L+T++SVLDKLWEINVK
Sbjct: 61  FAVVCHVSNALQRKDLIDKTVQKYGKIDVVVSNAAANPSVDSILQTQDSVLDKLWEINVK 120

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
           ++ILL++DAAP++ KGSSVV ISSIAGY PP++MAMYGVTKTALLGLTKALA EMAP TR
Sbjct: 121 ATILLLKDAAPYLPKGSSVVIISSIAGYHPPASMAMYGVTKTALLGLTKALAGEMAPKTR 180

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VNCVAPGFVPT+FA  +  N A+R+ LE KTLL RLGTT +M AA AFLASDDASYITGE
Sbjct: 181 VNCVAPGFVPTNFASFITSNSAMREELEAKTLLGRLGTTEDMGAATAFLASDDASYITGE 240

Query: 244 TLVVAGGMASRL 255
           T+VV+GGM SRL
Sbjct: 241 TIVVSGGMPSRL 252

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	255
TAIR|locus:2135467	254	IBR1 "indole-3-butyric acid re	0.996	1.0	0.643	1.7e-84
FB|FBgn0035588	317	CG10672 [Drosophila melanogast	0.972	0.782	0.450	3e-53
ZFIN|ZDB-GENE-040426-1498	276	zgc:65987 "zgc:65987" [Danio r	0.984	0.909	0.448	3.1e-51
UNIPROTKB|Q8WNV7	279	DHRS4 "Dehydrogenase/reductase	0.988	0.903	0.396	1.8e-46
UNIPROTKB|Q9GKX2	260	DHRS4 "Dehydrogenase/reductase	0.952	0.934	0.430	6.2e-46
UNIPROTKB|F1MZD5	279	DHRS4 "Dehydrogenase/reductase	1.0	0.913	0.392	2.7e-45
UNIPROTKB|Q8SPU8	279	DHRS4 "Dehydrogenase/reductase	1.0	0.913	0.392	4.4e-45
UNIPROTKB|Q9BTZ2	278	DHRS4 "Dehydrogenase/reductase	1.0	0.917	0.396	1.9e-44
WB|WBGene00010063	260	F54F3.4 [Caenorhabditis elegan	0.972	0.953	0.396	1.9e-44
UNIPROTKB|D3DS54	280	DHRS2 "Dehydrogenase/reductase	0.949	0.864	0.395	8.1e-44

TAIR|locus:2135467 IBR1 "indole-3-butyric acid response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
 Identities = 164/255 (64%), Positives = 194/255 (76%)

Query:     1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
             MEK  + +R +GKVA+VTASTQGIG G+ ER GLEGASVV+SSRKQ NVD+AV KLK+ G
Sbjct:     1 MEK-KLPRRLEGKVAIVTASTQGIGFGITERFGLEGASVVVSSRKQANVDEAVAKLKSKG 59

Query:    61 IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
             I+  GI+CHVSN QHR+NL++KTV+KYG+ID+ V NAA NP    +L +KE+VLDKLWEI
Sbjct:    60 IDAYGIVCHVSNAQHRRNLVEKTVQKYGKIDIVVCNAAANPSTDPILSSKEAVLDKLWEI 119

Query:   121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
             NVKSSILL+QD APH++KGSSV+FI+SIAG+ P  AMAMYGV              EMAP
Sbjct:   120 NVKSSILLLQDMAPHLEKGSSVIFITSIAGFSPQGAMAMYGVTKTALLGLTKALAAEMAP 179

Query:   181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
             DTRVN VAPGFVPTHFA  + G+  VR+ +E KTLLNRLGTTG+M             YI
Sbjct:   180 DTRVNAVAPGFVPTHFASFITGSSEVREGIEEKTLLNRLGTTGDMAAAAAFLASDDSSYI 239

Query:   241 TGETLVVAGGMASRL 255
             TGETLVVAGGM SRL
Sbjct:   240 TGETLVVAGGMPSRL 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0080024 "indolebutyric acid metabolic process" evidence=IMP

GO:0080026 "response to indolebutyric acid stimulus" evidence=IMP

GO:0048767 "root hair elongation" evidence=IMP

FB|FBgn0035588 CG10672 [Drosophila melanogaster (taxid:7227)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 113/251 (45%), Positives = 157/251 (62%)

Query:     8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
             KR  GKVAVVTAST GIG  +A+RL  +GA+VVISSRKQKNVD A+ +L+ L + V G+ 
Sbjct:    67 KRLAGKVAVVTASTDGIGFAIAKRLAEDGAAVVISSRKQKNVDSALAELRKLNLNVHGLK 126

Query:    68 CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             CHVS  + RK L ++T+ K+G++++ V NAA NP    +L+  E V DK++++NVKSS L
Sbjct:   127 CHVSEPEDRKQLFEETISKFGKLNILVSNAATNPAVGGVLECDEKVWDKIFDVNVKSSYL 186

Query:   128 LMQDAAP--HMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             L ++A P    QK SS+VF+SSIAGY     +  Y V              ++AP+  RV
Sbjct:   187 LAKEALPLLRQQKNSSIVFVSSIAGYDAFELLGAYSVSKTALIGLTKAAAKDLAPEGIRV 246

Query:   185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
             NC+APG + T F++AL  N++  +A   K  + RLGT+  M             YITGE+
Sbjct:   247 NCLAPGVIRTKFSKALYENESANEAALSKIPMGRLGTSEEMAGVVSFLVSEDAGYITGES 306

Query:   245 LVVAGGMASRL 255
             +V  GGM +RL
Sbjct:   307 IVAGGGMTARL 317

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=ISS

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

ZFIN|ZDB-GENE-040426-1498 zgc:65987 "zgc:65987" [Danio rerio (taxid:7955)]

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 114/254 (44%), Positives = 153/254 (60%)

Query:     5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
             ++++   GKVA+VTAST GIGL  AE LG  GA VV+SSR+Q NVDKAV  L++  I+VI
Sbjct:    23 HISQNLSGKVAIVTASTDGIGLAAAEALGQRGAHVVVSSRRQTNVDKAVSLLRSKNIKVI 82

Query:    65 GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
             G  C+V   + R+ LI+ TVE+ G +D+ V NAAVNP+  ++L + E V DK+  +NVK+
Sbjct:    83 GTTCNVGKAEDREKLINMTVEQCGGVDILVSNAAVNPFFGNILDSTEEVWDKILGVNVKA 142

Query:   125 SILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT 182
             S LL +   PH++K  G SVV +SS+AGYQP  A+  Y V              E+A   
Sbjct:   143 SFLLTKMVVPHIEKRGGGSVVIVSSVAGYQPMPALGPYSVSKTALLGLTRALAPELAQSN 202

Query:   183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
              RVNCVAPG + T F+ AL  N+ V +    +T + RLG    +             YIT
Sbjct:   203 IRVNCVAPGIIKTRFSSALWENEGVLEEFLKQTSIKRLGQPEEIGGVIAFLCSDEASYIT 262

Query:   242 GETLVVAGGMASRL 255
             GET+ V GGM SRL
Sbjct:   263 GETITVTGGMNSRL 276

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

UNIPROTKB|Q8WNV7 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Sus scrofa (taxid:9823)]

 Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
 Identities = 101/255 (39%), Positives = 147/255 (57%)

Query:     4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
             V   K  + KVA+VTAST GIGL +A RL  +GA VV+SSRKQ+NVD+ V  L+  G+ V
Sbjct:    25 VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV 84

Query:    64 IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
              G +CHV   + R+ L+   V  +G +D+ V NAAVNP+  +++   E V DK+  +NVK
Sbjct:    85 TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 144

Query:   124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP- 180
             +++L+ +   P M+K  G SV+ +SS+  Y P   +  Y V              E+AP 
Sbjct:   145 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 204

Query:   181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
             + RVNC+APG + T+F+Q L  + A ++ ++    + RLG   +              YI
Sbjct:   205 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYI 264

Query:   241 TGETLVVAGGMASRL 255
             TGET+VV GG ASRL
Sbjct:   265 TGETVVVGGGTASRL 279

GO:0055114 "oxidation-reduction process" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9GKX2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Oryctolagus cuniculus (taxid:9986)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 106/246 (43%), Positives = 142/246 (57%)

Query:    13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
             KVA+VTAST GIGL +A RL  +GA VVISSRKQ+NVD+AV  L+A G+ V G +CHV  
Sbjct:    15 KVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGK 74

Query:    73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
              + R+ L+   +  +G ID+ V NAAVNP+   L+   E V DK+ +INVK+  L+ +  
Sbjct:    75 AEDRERLVATALNLHGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAV 134

Query:   133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNCVAP 189
              P M+K  G SVV ++SIA + P S +  Y V              E+A    RVNC+AP
Sbjct:   135 VPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAP 194

Query:   190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAG 249
             G + T F++AL  + A  + +  K  + RLG                  YITGET+VVAG
Sbjct:   195 GLIKTSFSKALWEDKAQEENIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVVAG 254

Query:   250 GMASRL 255
             G  SRL
Sbjct:   255 GAPSRL 260

GO:0005739 "mitochondrion" evidence=ISS

UNIPROTKB|F1MZD5 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
 Identities = 102/260 (39%), Positives = 148/260 (56%)

Query:     1 MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
             M    MA+R   + KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  LK 
Sbjct:    20 MASCGMARRNPLENKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
              G+ V G +CHV   + R+ L+   V+ +G +D+ + NAAV+P+   L+   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXX 176
             ++NVK++ LL +   P M K  G S+V +SSIA Y P  ++  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX 235
             E+A  + RVNC+APG + T F++ L  + A +++++    + R+G               
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query:   236 XXXYITGETLVVAGGMASRL 255
                YITGET+VVAGG  S L
Sbjct:   260 DASYITGETVVVAGGSLSHL 279

GO:0042574 "retinal metabolic process" evidence=IEA

GO:0005777 "peroxisome" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0001758 "retinal dehydrogenase activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q8SPU8 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Bos taurus (taxid:9913)]

 Score = 474 (171.9 bits), Expect = 4.4e-45, P = 4.4e-45
 Identities = 102/260 (39%), Positives = 147/260 (56%)

Query:     1 MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
             M    MA+R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  LK 
Sbjct:    20 MASCGMARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKG 79

Query:    59 LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
              G+ V G +CHV   + R+ L+   V+ +G +D+ + NAAV+P+   L+   E V DK+ 
Sbjct:    80 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGVDILISNAAVSPFFGSLMDVPEEVWDKIL 139

Query:   119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXX 176
             ++NVK++ LL +   P M K  G S+V +SSIA Y P  ++  Y V              
Sbjct:   140 DVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLAL 199

Query:   177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX 235
             E+A  + RVNC+APG + T F++ L  + A +++++    + R+G               
Sbjct:   200 ELAESNVRVNCLAPGLIRTSFSRVLWEDPARQESIKATFQIKRIGKPEECAGIVSFLCSE 259

Query:   236 XXXYITGETLVVAGGMASRL 255
                YITGET+VVAGG  S L
Sbjct:   260 DASYITGETVVVAGGSLSHL 279

GO:0005739 "mitochondrion" evidence=ISS

GO:0005777 "peroxisome" evidence=IEA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|Q9BTZ2 DHRS4 "Dehydrogenase/reductase SDR family member 4" [Homo sapiens (taxid:9606)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 103/260 (39%), Positives = 144/260 (55%)

Query:     1 MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
             M    M +R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  L+ 
Sbjct:    19 MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 78

Query:    59 LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
              G+ V G +CHV   + R+ L+   V+ +G ID+ V NAAVNP+   ++   E V DK  
Sbjct:    79 EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 138

Query:   119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXX 176
             +INVK+  L+ +   P M+K  G SVV +SSIA + P    + Y V              
Sbjct:   139 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 198

Query:   177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX 235
             E+AP + RVNC+APG + T F++ L  +    ++++    + RLG   +           
Sbjct:   199 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 258

Query:   236 XXXYITGETLVVAGGMASRL 255
                YITGET+VV GG  SRL
Sbjct:   259 DASYITGETVVVGGGTPSRL 278

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0005739 "mitochondrion" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IDA;TAS

GO:0006066 "alcohol metabolic process" evidence=IDA

GO:0008202 "steroid metabolic process" evidence=IDA

GO:0042180 "cellular ketone metabolic process" evidence=IDA

GO:0016655 "oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor" evidence=IDA

GO:0004090 "carbonyl reductase (NADPH) activity" evidence=IDA

GO:0000253 "3-keto sterol reductase activity" evidence=IDA

GO:0018455 "alcohol dehydrogenase [NAD(P)+

GO:0051262 "protein tetramerization" evidence=IDA

GO:0005777 "peroxisome" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0005102 "receptor binding" evidence=IPI

WB|WBGene00010063 F54F3.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
 Identities = 101/255 (39%), Positives = 154/255 (60%)

Query:     8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGI 66
             +RF+GKVA+VTA+T+GIGL +AERL  EGASVVI SR QKNVD+A+E LK  G+ +V GI
Sbjct:     6 RRFEGKVAIVTAATKGIGLAIAERLLDEGASVVIGSRNQKNVDEAIEYLKNKGLTKVAGI 65

Query:    67 ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
               H+++   +K L+D T++K+G+I++ V N  +NP    +L+  + V DKL+E+NVK+  
Sbjct:    66 AGHIASTDDQKKLVDFTLQKFGKINILVNNHGINPAFGHILEVSDQVWDKLFEVNVKAGF 125

Query:   127 LLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-R 183
              + +   PH+ K  G +++F +S + Y+ P  +A YGV               +A D  R
Sbjct:   126 QMTKLVHPHIAKEGGGAIIFNASYSAYKSPPGIAAYGVTKTTLVGLTRALAMGLAKDNIR 185

Query:   184 VNCVAPGFVPTHFAQALL--GNDAVRKALEGKTL-LNRLGTTGNMXXXXXXXXXXXXXYI 240
             VN +APG + T  +Q L   G DA ++  + + + L RLG   +              YI
Sbjct:   186 VNGIAPGVIKTKMSQVLWDGGEDAEKELTDIQEIALGRLGVPDDCAGTVAYLASDDSSYI 245

Query:   241 TGETLVVAGGMASRL 255
             TGE +++AGG+ +RL
Sbjct:   246 TGEMIIIAGGVQARL 260

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0008667 "2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase activity" evidence=IEA

GO:0009239 "enterobactin biosynthetic process" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|D3DS54 DHRS2 "Dehydrogenase/reductase SDR family member 2" [Homo sapiens (taxid:9606)]

 Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
 Identities = 97/245 (39%), Positives = 139/245 (56%)

Query:    13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
             +VAVVT ST GIG  +A RL  +GA VVISSRKQ+NVD+A+ KL+  G+ V GI+CHV  
Sbjct:    37 RVAVVTGSTSGIGFAIARRLARDGAHVVISSRKQQNVDRAMAKLQGEGLSVAGIVCHVGK 96

Query:    73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
              + R+ L+ K +E  G +D  V +A VNP     L T E + DK+  +NVKS  LL+   
Sbjct:    97 AEDREQLVAKALEHCGGVDFLVCSAGVNPLVGSTLGTSEQIWDKILSVNVKSPALLLSQL 156

Query:   133 APHMQ-KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPG 190
              P+M+ +  +V+ +SSIA Y P  A+ +Y V              E+AP D RVNCV PG
Sbjct:   157 LPYMENRRGAVILVSSIAAYNPVVALGVYNVSKTALLGLTRTLALELAPKDIRVNCVVPG 216

Query:   191 FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAGG 250
              + T F++   GN+++ K  +    L R+G + +              Y+ GE + VAG 
Sbjct:   217 IIKTDFSKVFHGNESLWKNFKEHHQLQRIGESEDCAGIVSFLCSPDASYVNGENIAVAG- 275

Query:   251 MASRL 255
              ++RL
Sbjct:   276 YSTRL 280

GO:0000166 "nucleotide binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O67610	FABG_AQUAE	1, ., 1, ., 1, ., 1, 0, 0	0.3267	0.9372	0.9637	yes	no
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3333	0.9411	0.9756	yes	no
Q8WNV7	DHRS4_PIG	1, ., 1, ., 1, ., 1, 8, 4	0.4666	0.9882	0.9032	yes	no
P0A0H9	FABG_STAAM	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
Q5HPW0	FABG_STAEQ	1, ., 1, ., 1, ., 1, 0, 0	0.3497	0.9254	0.9672	yes	no
Q5HGK2	FABG_STAAC	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
Q8CPI3	FABG_STAES	1, ., 1, ., 1, ., 1, 0, 0	0.3497	0.9254	0.9672	yes	no
Q9KQH7	FABG_VIBCH	1, ., 1, ., 1, ., 1, 0, 0	0.3346	0.9254	0.9672	yes	no
Q49117	Y182_METEA	1, ., -, ., -, ., -	0.3536	0.9490	0.9758	yes	no
Q9GKX2	DHRS4_RABIT	1, ., 1, ., 1, ., 1, 8, 4	0.5	0.9529	0.9346	yes	no
Q6GHK4	FABG_STAAR	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
P99093	FABG_STAAN	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
P0A0I0	FABG_STAAW	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
Q99LB2	DHRS4_MOUSE	1, ., 1, ., 1, ., 1, 8, 4	0.4674	0.9529	0.8709	yes	no
Q5RCF8	DHRS4_PONAB	1, ., 1, ., 1, ., 1, 8, 4	0.4692	1.0	0.9172	yes	no
Q6G9Y2	FABG_STAAS	1, ., 1, ., 1, ., 1, 0, 0	0.3415	0.9254	0.9593	yes	no
P0A2C9	FABG_SALTY	1, ., 1, ., 1, ., 1, 0, 0	0.3346	0.9254	0.9672	yes	no
P50941	FABG_RICPR	1, ., 1, ., 1, ., 1, 0, 0	0.3618	0.8627	0.9128	yes	no
O31680	YKVO_BACSU	1, ., -, ., -, ., -	0.3453	0.9372	0.9637	yes	no
Q8SPU8	DHRS4_BOVIN	1, ., 1, ., 1, ., 1, 8, 4	0.4615	1.0	0.9139	yes	no
Q68VY7	FABG_RICTY	1, ., 1, ., 1, ., 1, 0, 0	0.3618	0.8627	0.9128	yes	no
Q8VID1	DHRS4_RAT	1, ., 1, ., 1, ., 1, 8, 4	0.4715	0.9529	0.8709	yes	no
P43713	FABG_HAEIN	1, ., 1, ., 1, ., 1, 0, 0	0.3292	0.9215	0.9710	yes	no
Q9BTZ2	DHRS4_HUMAN	1, ., 1, ., 1, ., 1, 8, 4	0.4653	1.0	0.9172	yes	no
P0AEK3	FABG_SHIFL	1, ., 1, ., 1, ., 1, 0, 0	0.3428	0.9254	0.9672	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	255
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	1e-93
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-72
cd05233	234	cd05233, SDR_c, classical (c) SDRs	7e-64
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-61
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-59
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-57
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	5e-56
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-55
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	2e-54
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	4e-54
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	4e-53
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	5e-53
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-48
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	7e-48
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	9e-48
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	2e-47
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-47
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	6e-47
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	6e-46
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	6e-45
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	7e-45
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-44
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	2e-44
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	4e-44
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-44
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	6e-43
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	7e-43
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-42
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-41
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	4e-41
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-40
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-40
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	3e-40
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-40
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	4e-40
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	2e-39
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-39
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	4e-39
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-38
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-38
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	3e-38
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	4e-38
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	5e-38
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	1e-37
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	1e-37
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	1e-37
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-37
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	2e-37
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	3e-37
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-37
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	3e-37
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	4e-37
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	6e-37
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	6e-37
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	7e-37
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	1e-36
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	2e-36
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	4e-36
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-36
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	8e-36
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	1e-35
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-35
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	2e-35
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-35
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	3e-34
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	4e-34
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	4e-34
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	6e-34
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-34
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	1e-33
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-33
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	2e-33
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	3e-33
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-33
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	4e-33
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	6e-33
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	8e-33
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	2e-32
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	2e-32
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	6e-32
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	7e-32
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	9e-32
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	1e-31
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-31
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	2e-31
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	3e-31
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	4e-31
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	4e-31
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	9e-31
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-30
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	2e-30
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-30
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	2e-30
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	7e-30
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	8e-30
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	2e-29
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	2e-29
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	2e-29
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	3e-29
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	4e-29
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	1e-28
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	1e-28
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	1e-28
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-28
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	1e-28
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	3e-28
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	4e-28
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	5e-28
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	7e-28
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	1e-27
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	1e-27
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-27
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	2e-27
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	2e-27
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-27
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	4e-27
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	9e-27
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	9e-27
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	9e-27
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	1e-26
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	1e-26
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	1e-26
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	2e-26
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-26
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	2e-26
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	5e-26
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	6e-26
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	1e-25
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	1e-25
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	1e-25
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	2e-25
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	2e-25
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	4e-25
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	8e-25
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-24
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-24
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	3e-24
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	4e-24
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	8e-24
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	1e-23
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-23
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	7e-23
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	8e-23
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	1e-22
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-22
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	2e-22
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-22
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	4e-22
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	5e-22
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-22
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	9e-22
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-21
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	2e-21
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-21
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	4e-21
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	4e-21
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	1e-20
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-20
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	2e-20
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-20
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	5e-20
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-20
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	8e-20
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	1e-19
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	1e-19
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	3e-19
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	4e-19
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	6e-19
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	8e-19
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-18
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	3e-18
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	3e-18
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	3e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	1e-17
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-17
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	2e-17
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	2e-17
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-17
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	6e-17
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	7e-17
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	7e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	1e-16
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	2e-16
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	2e-16
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	2e-16
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	2e-16
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	2e-16
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	3e-16
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	3e-16
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	5e-16
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	9e-16
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-15
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-15
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	3e-15
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	4e-15
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	4e-15
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	5e-15
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	5e-15
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	1e-14
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	1e-14
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	5e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	6e-14
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	1e-13
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	1e-13
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	2e-13
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	2e-13
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	2e-13
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	3e-13
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	7e-13
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	1e-12
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	1e-12
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-12
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	2e-12
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-12
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	4e-12
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	4e-12
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	1e-11
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	1e-11
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	4e-11
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	1e-10
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	2e-10
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-10
PRK08219	227	PRK08219, PRK08219, short chain dehydrogenase; Pro	2e-10
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	5e-10
PRK06079	252	PRK06079, PRK06079, enoyl-(acyl carrier protein) r	5e-10
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-09
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	2e-09
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	4e-09
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	1e-08
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
PRK08177	225	PRK08177, PRK08177, short chain dehydrogenase; Pro	2e-08
PLN02780	320	PLN02780, PLN02780, ketoreductase/ oxidoreductase	2e-08
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	4e-08
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	4e-08
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	7e-08
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	2e-07
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	4e-07
PRK07984	262	PRK07984, PRK07984, enoyl-(acyl carrier protein) r	4e-07
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	5e-07
PRK07889	256	PRK07889, PRK07889, enoyl-(acyl carrier protein) r	5e-07
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	8e-07
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-06
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	7e-06
PRK08303	305	PRK08303, PRK08303, short chain dehydrogenase; Pro	5e-05
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	5e-05
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	6e-05
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	7e-05
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	7e-05
PRK05854	313	PRK05854, PRK05854, short chain dehydrogenase; Pro	8e-05
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	9e-05
PRK06300	299	PRK06300, PRK06300, enoyl-(acyl carrier protein) r	1e-04
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	1e-04
TIGR01500	256	TIGR01500, sepiapter_red, sepiapterin reductase	2e-04
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	2e-04
PRK06997	260	PRK06997, PRK06997, enoyl-(acyl carrier protein) r	2e-04
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	3e-04
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	3e-04
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	0.001
PRK07424	406	PRK07424, PRK07424, bifunctional sterol desaturase	0.003
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	0.003
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	0.004
PLN02730	303	PLN02730, PLN02730, enoyl-[acyl-carrier-protein] r	0.004

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =  275 bits (705), Expect = 1e-93
 Identities = 121/255 (47%), Positives = 169/255 (66%), Gaps = 3/255 (1%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           V        KVA+VTAST GIGL +A RL  +GA VV+SSRKQ+NVD+AV  L+  G+ V
Sbjct: 2   VTRRDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSV 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
            G +CHV   + R+ L+   V  +G +D+ V NAAVNP+  ++L + E V DK+ ++NVK
Sbjct: 62  TGTVCHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDVNVK 121

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           ++ L+ +   P M+K  G SVV +SS+A + P   +  Y V+KTALLGLTK LA E+AP 
Sbjct: 122 ATALMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPR 181

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           + RVNC+APG + T F+ AL  + AV ++++    + RLG   + A  ++FL S+DASYI
Sbjct: 182 NIRVNCLAPGLIKTSFSSALWMDKAVEESMKETLRIRRLGQPEDCAGIVSFLCSEDASYI 241

Query: 241 TGETLVVAGGMASRL 255
           TGET+VV GG  SRL
Sbjct: 242 TGETVVVGGGTPSRL 256

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  221 bits (566), Expect = 2e-72
 Identities = 97/249 (38%), Positives = 141/249 (56%), Gaps = 6/249 (2%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R +GKVA+VT ++ GIG G+A R   EGA VV++ R ++  ++   ++ A G   I + 
Sbjct: 1   MRLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGG-RAIAVA 59

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+E   +  +   +E++G +D+ V NA        LL   E+  D+++ +NVKS  L
Sbjct: 60  ADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYL 119

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             Q A P M  + G ++V ++S AG +P   +  Y  +K A++ LTKALAAE+ PD  RV
Sbjct: 120 WTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 185 NCVAPGFVPTHFAQALLGNDAV--RKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           N VAP  V T   +A +G      R        L RLGT  ++A A  FLASD+AS+ITG
Sbjct: 180 NAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITG 239

Query: 243 ETLVVAGGM 251
            TLVV GG 
Sbjct: 240 VTLVVDGGR 248

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  199 bits (507), Expect = 7e-64
 Identities = 92/236 (38%), Positives = 139/236 (58%), Gaps = 6/236 (2%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           A+VT ++ GIG  +A RL  EGA VV++ R ++ + +    ++ALG   + +   VS+E+
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAKVVLADRNEEALAELAA-IEALGGNAVAVQADVSDEE 59

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
             + L+++ +E++GR+D+ V NA +      L +  +   D++ ++N+    LL + A P
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIAR-PGPLEELTDEDWDRVLDVNLTGVFLLTRAALP 118

Query: 135 HM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           HM  Q G  +V ISS+AG +P    A Y  +K AL GLT++LA E+AP   RVN VAPG 
Sbjct: 119 HMKKQGGGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAPGL 178

Query: 192 VPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           V T      LG +   K L     L RLGT   +A A+ FLASD+ASYITG+ + V
Sbjct: 179 VDTPMLAK-LGPEEAEKELAAAIPLGRLGTPEEVAEAVVFLASDEASYITGQVIPV 233

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  192 bits (490), Expect = 4e-61
 Identities = 88/247 (35%), Positives = 135/247 (54%), Gaps = 6/247 (2%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
              QGK A+VT +++GIG  +A RL  +GA VVI    ++  +    +L+A G E   ++
Sbjct: 1   MSLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+E   + LI+  VE +G +D+ V NA +   A  L +  E   D++ ++N+  +  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGITRDAL-LPRMSEEDWDRVIDVNLTGTFN 119

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +++ A P M   +   +V ISS++G         Y   K  ++G TKALA E+A     V
Sbjct: 120 VVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITV 179

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N VAPGF+ T   + L   + V+  +  +  L RLG    +A A+AFLASD ASYITG+ 
Sbjct: 180 NAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQV 237

Query: 245 LVVAGGM 251
           + V GGM
Sbjct: 238 IPVNGGM 244

Length = 246

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  186 bits (475), Expect = 9e-59
 Identities = 94/248 (37%), Positives = 143/248 (57%), Gaps = 7/248 (2%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGI 66
            +  GKVA+VT ++ GIG  +AE L  EGA VVI+    ++   + +E++K  G + I +
Sbjct: 1   MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAV 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              VS+E+  +NL+++ VEK+G+ID+ V NA ++ +      T E   D++ ++N+   +
Sbjct: 61  KADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDE-EWDRVIDVNLTGVM 119

Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           LL + A P+M  +K   +V ISSI G    S   +Y  +K A+   TKALA E+AP   R
Sbjct: 120 LLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIR 179

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAPG + T    +    D  ++ L  +  L RLG    +A  + FLASDDASYITG+
Sbjct: 180 VNAVAPGAIDTEMWSSFSEED--KEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ 237

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 238 IITVDGGW 245

Length = 247

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  183 bits (465), Expect = 2e-57
 Identities = 100/251 (39%), Positives = 142/251 (56%), Gaps = 8/251 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI--SSRKQKNVDKAVEKLKALG-IEVIG 65
              GKVA+VT ++ GIG  +A  L  EGA VV+     +++  +     +K  G      
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 66  IICHVSN-EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
           +   VS+ E+  + L+    E++GRID+ V NA +    A L +  E   D++ ++N+  
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLG 121

Query: 125 SILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           + LL + A P M+K   +V ISS+AG   P   A Y  +K AL+GLTKALA E+AP   R
Sbjct: 122 AFLLTRAALPLMKKQ-RIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIR 180

Query: 184 VNCVAPGFVPTHFAQALLGND-AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD-ASYIT 241
           VN VAPG++ T    AL   +    K L  +  L RLGT   +AAA+AFLASD+ ASYIT
Sbjct: 181 VNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASYIT 240

Query: 242 GETLVVAGGMA 252
           G+TL V GG+ 
Sbjct: 241 GQTLPVDGGLL 251

Length = 251

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  179 bits (456), Expect = 5e-56
 Identities = 90/245 (36%), Positives = 131/245 (53%), Gaps = 3/245 (1%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GK+A+VT +++GIG  +A+ L  +GA V++SSRK        + + A G +   + CH+ 
Sbjct: 8   GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIG 67

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
             +    L     E++GR+D+ V NAA NPY   +L T      K  ++N++    +  +
Sbjct: 68  EMEQIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVE 127

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   M  Q G S+V ++S+ G  P     +Y +TK A++ +TKA A E AP   RVN + 
Sbjct: 128 AGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALL 187

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG   T FA AL  NDA+ K       L R      MA A+ +LASD +SY TGE L V 
Sbjct: 188 PGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGECLNVD 247

Query: 249 GGMAS 253
           GG  S
Sbjct: 248 GGYLS 252

Length = 252

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  178 bits (453), Expect = 2e-55
 Identities = 89/249 (35%), Positives = 142/249 (57%), Gaps = 7/249 (2%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGI 66
              +GKVA+VT +++GIG  +AERL  +GA+VVI+    +   +  V ++ ALG + + +
Sbjct: 1   MSLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAV 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              VS+ +  +  +D+   ++G +D+ V NA +      L++ KE   D++ + N+    
Sbjct: 61  QGDVSDAESVERAVDEAKAEFGGVDILVNNAGIT-RDNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 127 LLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            L +  A  M K  S  ++ ISS+ G       A Y  +K  ++G TK+LA E+A     
Sbjct: 120 NLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGIT 179

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAPGF+ T    AL   + V++A+  +  L RLG    +A+A+AFLASD+A+YITG+
Sbjct: 180 VNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQ 237

Query: 244 TLVVAGGMA 252
           TL V GGM 
Sbjct: 238 TLHVNGGMV 246

Length = 248

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  175 bits (446), Expect = 2e-54
 Identities = 89/244 (36%), Positives = 142/244 (58%), Gaps = 11/244 (4%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNE 73
           A+VT +++GIG  +A +L  EGA V+I+ R   +  ++ VE+LKA G++ +G++C VS+ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSILLMQD 131
           +  K ++++  E+ G ID+ V NA +     D  L++ KE   D + + N+     L Q 
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI---TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQA 117

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               M  Q+   ++ ISS+ G    +  A Y  +K  ++G TK+LA E+A  +  VN VA
Sbjct: 118 VLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVA 177

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PGF+ T     L  ++ V+K +  +  L R GT   +A A+AFLASD+ASYITG+ + V 
Sbjct: 178 PGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVD 235

Query: 249 GGMA 252
           GGM 
Sbjct: 236 GGMY 239

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  174 bits (443), Expect = 4e-54
 Identities = 88/244 (36%), Positives = 136/244 (55%), Gaps = 10/244 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT +++GIG  +A RL  EGA V ++ R ++   + VE++KALG     +   VS+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAKVAVTDRSEEAAAETVEEIKALGGNAAALEADVSD 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSILLMQ 130
            +  + L++K   ++G +D+ V NA +     D  L++  E   D +  +N+     + Q
Sbjct: 61  REAVEALVEKVEAEFGPVDILVNNAGI---TRDNLLMRMSEEDWDAVINVNLTGVFNVTQ 117

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
                M  ++   ++ ISS+ G       A Y  +K  ++G TK+LA E+A     VN V
Sbjct: 118 AVIRAMIKRRSGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNAV 177

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APGF+ T    AL   + V++ +  +  L RLGT   +A A+AFLASDDASYITG+ L V
Sbjct: 178 APGFIDTDMTDAL--PEKVKEKILKQIPLGRLGTPEEVANAVAFLASDDASYITGQVLHV 235

Query: 248 AGGM 251
            GGM
Sbjct: 236 NGGM 239

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  172 bits (437), Expect = 4e-53
 Identities = 89/249 (35%), Positives = 138/249 (55%), Gaps = 11/249 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            GK A+VT  ++G+GL +AE LG  GA VV+S+RK + +++A   L+ALGI+ + I   V
Sbjct: 11  SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADV 70

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           ++E   + L ++T+E++G +D+ V NA    + A          DK+  +NV+   LL Q
Sbjct: 71  ADEADIERLAEETLERFGHVDILVNNAGAT-WGAPAEDHPVEAWDKVMNLNVRGLFLLSQ 129

Query: 131 DAAPHM---QKGSSVVFISSIAGYQ--PPSAMAM--YGVTKTALLGLTKALAAEMAP-DT 182
             A      +    ++ ++S+AG    PP  M    Y  +K A++  T+ALAAE  P   
Sbjct: 130 AVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGI 189

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN +APGF PT   +  L  + + + L   T L RLG   ++  A   LASD + +ITG
Sbjct: 190 RVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKHITG 247

Query: 243 ETLVVAGGM 251
           + L V GG+
Sbjct: 248 QILAVDGGV 256

Length = 259

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  171 bits (436), Expect = 5e-53
 Identities = 82/252 (32%), Positives = 140/252 (55%), Gaps = 13/252 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKVA+VTA++ GIGL +A  L  EGA V I +R ++N+++A  +L+A G  V+ ++  ++
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGARVAICARNRENLERAASELRAGGAGVLAVVADLT 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + +    L++K  + +GR+D+ V NA   P      +  +    + +++ + S I +++ 
Sbjct: 61  DPEDIDRLVEKAGDAFGRVDILVNNAG-GPPPGPFAELTDEDWLEAFDLKLLSVIRIVRA 119

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
             P M  +    +V ISS+   +P   + +  V +  L+GL K L+ E+APD   VN V 
Sbjct: 120 VLPGMKERGWGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVNSVL 179

Query: 189 PGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           PG++ T   + LL           +   K +  +  L R+G    +AA IAFLAS+ ASY
Sbjct: 180 PGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPLGRVGKPEELAALIAFLASEKASY 239

Query: 240 ITGETLVVAGGM 251
           ITG+ ++V GG+
Sbjct: 240 ITGQAILVDGGL 251

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  160 bits (407), Expect = 1e-48
 Identities = 85/250 (34%), Positives = 130/250 (52%), Gaps = 10/250 (4%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G+VA+VT + +GIG  +A RL  +GA V++      +     E ++A G +     
Sbjct: 2   RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQ 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V +    K  +   VE +GR+D+ V NA + P      +  +   +++ ++N+  + L
Sbjct: 62  VDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPLTP-FAEMDDEQWERVIDVNLTGTFL 120

Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAM---AMYGVTKTALLGLTKALAAEMAPDT 182
           L Q A P + +  G  +V  SS+AG  P       A Y  +K  L+G T+ALA E+A   
Sbjct: 121 LTQAALPALIRAGGGRIVLTSSVAG--PRVGYPGLAHYAASKAGLVGFTRALALELAARN 178

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
             VN V PG V T  A   LG+    +A+     L RLG   ++AAA+ FLASD+A YIT
Sbjct: 179 ITVNSVHPGGVDTPMAGN-LGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYIT 237

Query: 242 GETLVVAGGM 251
           G+TL V GG 
Sbjct: 238 GQTLPVDGGA 247

Length = 251

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  158 bits (402), Expect = 7e-48
 Identities = 82/257 (31%), Positives = 128/257 (49%), Gaps = 23/257 (8%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIIC 68
            +GKVA +T    GIG  +A+     GASV I+ RK + ++ A E++ +  G     I C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN-PYAADLLKTK--ESVLDKLWEINVKSS 125
            V + +  +  +D+T++++G+ID+ + NAA N    A+ L     ++V+D    I++  +
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAESLSPNGFKTVID----IDLNGT 116

Query: 126 ILLMQDAAPH---MQKGSSVVFISSI-----AGYQPPSAMAMYGVTKTALLGLTKALAAE 177
               +         + G S++ IS+      + +Q  SA A     K  +  LT++LA E
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAA-----KAGVDALTRSLAVE 171

Query: 178 MAPD-TRVNCVAPGFVPTHFAQA-LLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
             P   RVN +APG +PT      L  +    K +  +  L RLGT   +A    FL SD
Sbjct: 172 WGPYGIRVNAIAPGPIPTTEGMERLAPSGKSEKKMIERVPLGRLGTPEEIANLALFLLSD 231

Query: 236 DASYITGETLVVAGGMA 252
            ASYI G TLVV GG  
Sbjct: 232 AASYINGTTLVVDGGQW 248

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  158 bits (401), Expect = 9e-48
 Identities = 73/244 (29%), Positives = 126/244 (51%), Gaps = 4/244 (1%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           +GKVA+VT +++GIG G+A  L   GA++VI+SR ++  ++A + ++  G+E     C V
Sbjct: 4   KGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCDV 63

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           S+E+  K  ++   E +G+ID+ V NA +        +  E+    + ++N+     + Q
Sbjct: 64  SDEEAIKAAVEAIEEDFGKIDILVNNAGII-RRHPAEEFPEAEWRDVIDVNLNGVFFVSQ 122

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
             A HM  Q    ++ I S+        +  Y  +K  + GLTKALA E A    +VN +
Sbjct: 123 AVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGIQVNAI 182

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APG+  T   +A++ +      +  +    R G   ++  A  FLASD + Y+ G+ + V
Sbjct: 183 APGYFATEMTEAVVADPEFNDDILKRIPAGRWGQPEDLVGAAVFLASDASDYVNGQIIFV 242

Query: 248 AGGM 251
            GG 
Sbjct: 243 DGGW 246

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  157 bits (398), Expect = 2e-47
 Identities = 86/248 (34%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +GK A+VT  T+GIG  + E L   GA V   +R QK +D+ + + +  G +V G +C
Sbjct: 3   NLEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVC 62

Query: 69  HVSNEQHRKNLIDKTVEKY--GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
            VS+   R+ L+D TV  +  G++++ V NA  N        T+E     +   N +++ 
Sbjct: 63  DVSSRSERQELMD-TVASHFGGKLNILVNNAGTNIRKEAKDYTEED-YSLIMSTNFEAAY 120

Query: 127 LLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-R 183
            L + A P ++     ++VFISS+AG     + A YG TK AL  LT++LA E A D  R
Sbjct: 121 HLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDNIR 180

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAP  + T   + ++        +  +T L R G    +AA +AFL    ASYITG+
Sbjct: 181 VNAVAPWVIATPLVEPVIQQKENLDKVIERTPLKRFGEPEEVAALVAFLCMPAASYITGQ 240

Query: 244 TLVVAGGM 251
            + V GG+
Sbjct: 241 IIAVDGGL 248

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  156 bits (397), Expect = 3e-47
 Identities = 85/247 (34%), Positives = 135/247 (54%), Gaps = 7/247 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGII 67
              G+VA+VT + +G+G  +A RL   GA VV+  R  +   ++ VE ++ALG     + 
Sbjct: 3   SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQ 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+++   +  +   VE++GRID+ V NA +      L    +   D++ ++N+     
Sbjct: 63  ADVTDKAALEAAVAAAVERFGRIDILVNNAGIFEDKP-LADMSDDEWDEVIDVNLSGVFH 121

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L++   P M  Q+G  +V ISS+AG       + Y   K  L+GLTKALA E+A     V
Sbjct: 122 LLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITV 181

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N VAPG + T   +A +  +  R+A + +T L R GT  ++A A+AFL SD + YITG+ 
Sbjct: 182 NMVAPGDIDTDMKEATI--EEAREAKDAETPLGRSGTPEDIARAVAFLCSDASDYITGQV 239

Query: 245 LVVAGGM 251
           + V GG+
Sbjct: 240 IEVTGGV 246

Length = 249

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  156 bits (396), Expect = 6e-47
 Identities = 83/246 (33%), Positives = 126/246 (51%), Gaps = 4/246 (1%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R   +VAVVT + +G+G  +A      GA V+I++R +  +D+  E+++A G     +  
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAA 66

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +++ +    L  + VE +GR+D+ V N         LL T    L   +  NV ++  L
Sbjct: 67  DLAHPEATAGLAGQAVEAFGRLDIVVNNVG-GTMPNPLLSTSTKDLADAFTFNVATAHAL 125

Query: 129 MQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
              A P M +   G SV+ ISS  G       A YG  K AL   T+  A ++ P  RVN
Sbjct: 126 TVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPRIRVN 185

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +APG + T   + +  ND +R  +E  T L RLG   ++AAA  +LAS   SY+TG+TL
Sbjct: 186 AIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTL 245

Query: 246 VVAGGM 251
            V GG+
Sbjct: 246 EVDGGL 251

Length = 263

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score =  153 bits (389), Expect = 6e-46
 Identities = 87/244 (35%), Positives = 123/244 (50%), Gaps = 12/244 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             G+V +VT  T+GIG G+A      GA+VV+  R+              G         
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--------VDGRPAEFHAAD 55

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V +      L+D  VE++GR+DV V NA  +PYA    +      +K+ E+N+ + +L+ 
Sbjct: 56  VRDPDQVAALVDAIVERHGRLDVLVNNAGGSPYA-LAAEASPRFHEKIVELNLLAPLLVA 114

Query: 130 QDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
           Q A   MQ+   G S+V I S++G +P    A YG  K  LL LT++LA E AP  RVN 
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNA 174

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           V  G V T  ++   G+     A+     L RL T  ++A A  FLASD ASY++G  L 
Sbjct: 175 VVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGANLE 234

Query: 247 VAGG 250
           V GG
Sbjct: 235 VHGG 238

Length = 252

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  151 bits (382), Expect = 6e-45
 Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 4/249 (1%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M+  F GKVA+VT    GIG   A     EGA VV++ R     ++ V  ++  G E + 
Sbjct: 1   MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALF 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           + C V+ +   K L+++T+  YGR+D    NA +      L +  E+  D +  +NVK  
Sbjct: 61  VACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGV 120

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PDT 182
            L M+   P M  Q G ++V  +S+AG      M++Y  +K A++GLTK+ A E A    
Sbjct: 121 WLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGI 180

Query: 183 RVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
           RVN V P  + T  F +A   +    +       + R+G    +A+A+ +L SD AS+ T
Sbjct: 181 RVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT 240

Query: 242 GETLVVAGG 250
           G  L+V GG
Sbjct: 241 GHALMVDGG 249

Length = 253

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  150 bits (382), Expect = 7e-45
 Identities = 81/249 (32%), Positives = 129/249 (51%), Gaps = 12/249 (4%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHV 70
           GKVA+VT ++ GIG  +A RL   GA+VV++ R +++  ++ VE++KA+G + I +   V
Sbjct: 3   GKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEIKAVGGKAIAVQADV 62

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEINVKSSIL 127
           S E+    L    ++++G +D+ V NA +          L+    V+D    +N+    L
Sbjct: 63  SKEEDVVALFQSAIKEFGTLDILVNNAGLQGDASSHEMTLEDWNKVID----VNLTGQFL 118

Query: 128 LMQDAAPHMQKGSS---VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
             ++A    +K      ++ +SS+    P      Y  +K  +  +TK LA E AP   R
Sbjct: 119 CAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIR 178

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN +APG + T        +   R  L     + R+G    +AAA A+LASD+ASY+TG 
Sbjct: 179 VNAIAPGAINTPINAEAWDDPEQRADLLSLIPMGRIGEPEEIAAAAAWLASDEASYVTGT 238

Query: 244 TLVVAGGMA 252
           TL V GGM 
Sbjct: 239 TLFVDGGMT 247

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  150 bits (381), Expect = 2e-44
 Identities = 72/247 (29%), Positives = 128/247 (51%), Gaps = 4/247 (1%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVI 64
           + + +GK A++T    GIG  VA     EGA V I+    ++ + ++  + ++  G + +
Sbjct: 21  SGKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGRKCL 80

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            I   + +E   ++L+ + V+++G++D+ V NAA       +       L+K +  N+ S
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQESIEDITTEQLEKTFRTNIFS 140

Query: 125 SILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
              L + A PH++KGSS++  +S+  Y+    +  Y  TK A++  T+ L+ ++A    R
Sbjct: 141 MFYLTKAALPHLKKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIR 200

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAPG + T    +    + V      +  + R G    +A A  FLAS D+SY+TG+
Sbjct: 201 VNAVAPGPIWTPLIPSSFPEEKV-SEFGSQVPMGRAGQPAEVAPAYVFLASQDSSYVTGQ 259

Query: 244 TLVVAGG 250
            L V GG
Sbjct: 260 VLHVNGG 266

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  149 bits (378), Expect = 2e-44
 Identities = 84/257 (32%), Positives = 130/257 (50%), Gaps = 23/257 (8%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            + KVA+VT  +QGIG  V  RL  EG++V+    K+ +    V+  K            
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS-YNDVDYFK----------VD 52

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VSN++     ID  + KYGRID+ V NA +  Y A +   +E   D++  +NV    L+ 
Sbjct: 53  VSNKEQVIKGIDYVISKYGRIDILVNNAGIESYGA-IHAVEEDEWDRIINVNVNGIFLMS 111

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +   P+M  Q    ++ I+S+  +      A Y  +K A+LGLT+++A + AP  R   V
Sbjct: 112 KYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAV 171

Query: 188 APGFVPTHF----AQALLGNDAV---RKALEGKTL--LNRLGTTGNMAAAIAFLASDDAS 238
            PG + T      A+  +G D     RK  E   +  + R+G    +A  +AFLASD AS
Sbjct: 172 CPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDLAS 231

Query: 239 YITGETLVVAGGMASRL 255
           +ITGE + V GG+ + +
Sbjct: 232 FITGECVTVDGGLRALI 248

Length = 258

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  148 bits (376), Expect = 4e-44
 Identities = 75/242 (30%), Positives = 126/242 (52%), Gaps = 4/242 (1%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
            GKVA+VT +++GIG  +A+RL  +GASVV++ +  +   ++ V +++A G + I +   
Sbjct: 2   AGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIAVQAD 61

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS+      L D   + +G +D+ V NA V      + +T E   D+++ +N K +  ++
Sbjct: 62  VSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKKP-IAETSEEEFDRMFTVNTKGAFFVL 120

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           Q+AA  ++ G  ++ ISS            Y  +K A+   T+ LA E+      VN VA
Sbjct: 121 QEAAKRLRDGGRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVLAKELGGRGITVNAVA 180

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG V T    A    +AV +     + L RLG   ++A  +AFLAS D  ++ G+ +   
Sbjct: 181 PGPVDTDMFYAGKTEEAV-EGYAKMSPLGRLGEPEDIAPVVAFLASPDGRWVNGQVIRAN 239

Query: 249 GG 250
           GG
Sbjct: 240 GG 241

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  148 bits (375), Expect = 8e-44
 Identities = 80/243 (32%), Positives = 141/243 (58%), Gaps = 6/243 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICH 69
           + KV VVT S +GIG  +A RL  EG+ VV++++K+   +++ ++ +K  G E IG++  
Sbjct: 5   KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLAD 64

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS  +  + L   T+++YG  D+ V NA +  ++   L   + ++DK    + KS I   
Sbjct: 65  VSTREGCETLAKATIDRYGVADILVNNAGLGLFSP-FLNVDDKLIDKHISTDFKSVIYCS 123

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
           Q+ A  M++G ++V I+S+AG +P   +++YG  K A++ LTK LA E+AP  RVN +AP
Sbjct: 124 QELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAP 183

Query: 190 GFVPTHFAQAL--LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           GFV T   ++L  +   + ++  E  TL+ ++     +A  +A +   ++  ITG+  V+
Sbjct: 184 GFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKIES--ITGQVFVL 241

Query: 248 AGG 250
             G
Sbjct: 242 DSG 244

Length = 252

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  146 bits (369), Expect = 6e-43
 Identities = 80/248 (32%), Positives = 134/248 (54%), Gaps = 6/248 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGI 66
           R  G+ A++T +++GIGL +A      GA V+I +R    + +A ++L       EV G+
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              VS+++ R+ ++D   + +  + + V NA  N   A +  T++     ++E N+ S+ 
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDE-WRGIFETNLFSAF 124

Query: 127 LLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            L + A P ++    S++V I S++G     + A YG+TK ALL +T+ LA E A D  R
Sbjct: 125 ELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIR 184

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAP ++ T      L +    + +  +T + R+G    +AAA+AFL    ASYITG+
Sbjct: 185 VNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYITGQ 244

Query: 244 TLVVAGGM 251
            + V GG 
Sbjct: 245 CIAVDGGF 252

Length = 257

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  145 bits (368), Expect = 7e-43
 Identities = 82/240 (34%), Positives = 121/240 (50%), Gaps = 5/240 (2%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV-EKLKALGIEVIGIICHVSNE 73
           A+VT  ++GIG  +A RL   GA VVI+ RK K+    V  +++ LG + + +   VS  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
           Q  + +     E++GR+DV V NAA   +   L +   +  D     N+K+ +   Q AA
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAAAGAFR-PLSELTPAHWDAKMNTNLKALVHCAQQAA 119

Query: 134 PHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
             M  + G  +V ISS+   +        G  K AL  L + LA E+ P   RVN V+PG
Sbjct: 120 KLMRERGGGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVSPG 179

Query: 191 FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
            + T         + + +A    T   R+GT  ++A A+ FL SD A  ITG+TLVV GG
Sbjct: 180 VIDTDALAHFPNREDLLEAAAANTPAGRVGTPQDVADAVGFLCSDAARMITGQTLVVDGG 239

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  144 bits (365), Expect = 3e-42
 Identities = 80/255 (31%), Positives = 117/255 (45%), Gaps = 14/255 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +GKVA+VT +  GIGL +A  L  EGA VVI+    +    A E L+  G + IG+  
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAM 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++E+     ID  VE +G +D+ V NA +  + A +         K+  I +  + L 
Sbjct: 61  DVTDEEAINAGIDYAVETFGGVDILVNNAGIQ-HVAPIEDFPTEKWKKMIAIMLDGAFLT 119

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + A P M  Q G  ++ ++S+ G    +  A Y   K  L+GLTK +A E A     VN
Sbjct: 120 TKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVN 179

Query: 186 CVAPGFVPTHF------AQALLGNDAVRKALE----GKTLLNRLGTTGNMAAAIAFLASD 235
            + PG+V T          A     +  + LE          R  T   +A    FLAS 
Sbjct: 180 AICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASF 239

Query: 236 DASYITGETLVVAGG 250
            A  +TG+  VV GG
Sbjct: 240 AAKGVTGQAWVVDGG 254

Length = 258

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  142 bits (359), Expect = 2e-41
 Identities = 83/254 (32%), Positives = 133/254 (52%), Gaps = 15/254 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHV 70
            KVA++T + QGIG  +AERL  +G ++V++    ++     ++++   G   + +   V
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADV 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +++   + LID+ VEK+G  DV V NA + P    LL   E  L K++ +NV   +  +Q
Sbjct: 62  TDKDDVEALIDQAVEKFGSFDVMVNNAGIAP-ITPLLTITEEDLKKVYAVNVFGVLFGIQ 120

Query: 131 DAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            AA   +K   G  ++  SSIAG Q    +  Y  +K A+ GLT+  A E+AP    VN 
Sbjct: 121 AAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNA 180

Query: 187 VAPGFVPTHF--------AQALLGNDAVRKALEGKTL-LNRLGTTGNMAAAIAFLASDDA 237
            APG V T           +     +    A    ++ L RL    ++A  ++FLAS+D+
Sbjct: 181 YAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPLGRLSEPEDVAGLVSFLASEDS 240

Query: 238 SYITGETLVVAGGM 251
            YITG+T++V GGM
Sbjct: 241 DYITGQTILVDGGM 254

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  141 bits (357), Expect = 4e-41
 Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 9/248 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
             +GKVA+VT  ++GIGL +A  L   GA V I        ++  E+L K  G++     
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGVKTKAYK 64

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C VS+++  +    +  + +G+ID+ + NA +  +   L  T E   +K+ ++N+     
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGITVHKPALDYTYEQW-NKVIDVNLNGVFN 123

Query: 128 LMQDAAPHMQKG--SSVVFISSIAGYQP--PSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
             Q AA   +K    S++  +S++G     P   A Y  +K A++ L K+LA E A    
Sbjct: 124 CAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYFI 183

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN ++PG++ T        +  +RK  E    L R+     +  A  +LASD +SY TG
Sbjct: 184 RVNSISPGYIDT--DLTDFVDKELRKKWESYIPLKRIALPEELVGAYLYLASDASSYTTG 241

Query: 243 ETLVVAGG 250
             L++ GG
Sbjct: 242 SDLIIDGG 249

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  139 bits (352), Expect = 2e-40
 Identities = 76/246 (30%), Positives = 127/246 (51%), Gaps = 8/246 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEINVKSSIL 127
            +++EQ    L D  + K G++D+ V NA    P   D+     +   + +E+NV S   
Sbjct: 68  DITSEQELSALADFALSKLGKVDILVNNAGGGGPKPFDM---PMADFRRAYELNVFSFFH 124

Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L Q  AP M+K  G  ++ I+S+A       M  Y  +K A   L + +A ++   + RV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N +APG + T   ++++  +  +K L+  T + RLG   ++A A  FL S  AS+++G+ 
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQKMLQ-HTPIRRLGQPQDIANAALFLCSPAASWVSGQI 243

Query: 245 LVVAGG 250
           L V+GG
Sbjct: 244 LTVSGG 249

Length = 255

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  139 bits (351), Expect = 2e-40
 Identities = 83/250 (33%), Positives = 135/250 (54%), Gaps = 13/250 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
            F GKVA+VT S++GIG  +A RL  EG  + ++ +R +K  ++  E+++ALG + + + 
Sbjct: 1   VFSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVK 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
            +V + +  K +  +  E++GR+DVFV NAA        ++ +ES  D    IN K+ + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVLRP-AMELEESHWDWTMNINAKALLF 119

Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             Q+AA  M+K  G  ++ +SS+   +        GV+K AL  LT+ LA E+AP    V
Sbjct: 120 CAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAV 179

Query: 185 NCVAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           N V+ G V T    HF       + + +    KT   R+    ++A A+ FL S +A  I
Sbjct: 180 NAVSGGAVDTDALKHFPNR----EELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMI 235

Query: 241 TGETLVVAGG 250
            G+T++V GG
Sbjct: 236 RGQTIIVDGG 245

Length = 250

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  139 bits (351), Expect = 3e-40
 Identities = 87/247 (35%), Positives = 126/247 (51%), Gaps = 8/247 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R +GKVA+VT +  G G G+A R   EGA VVI+     N D A      +G   I I  
Sbjct: 2   RLEGKVAIVTGAGSGFGEGIARRFAQEGARVVIADI---NADGAERVAADIGEAAIAIQA 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+     + +++  + K+GR+D+ V NA +      +L+  E   D+++ +NVKS  L 
Sbjct: 59  DVTKRADVEAMVEAALSKFGRLDILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLS 118

Query: 129 MQDAAPHMQKGSSVVFI--SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q   PHM++    V I  +S AG +P   +  Y  +K  ++  TKA+A E+AP   RVN
Sbjct: 119 AQALVPHMEEQGGGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVN 178

Query: 186 CVAPGFVPTHFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           C+ P    T      +G D    R        L RL T  ++A A  +LASD+AS+ITG 
Sbjct: 179 CLCPVAGETPLLSMFMGEDTPENRAKFRATIPLGRLSTPDDIANAALYLASDEASFITGV 238

Query: 244 TLVVAGG 250
            L V GG
Sbjct: 239 ALEVDGG 245

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  138 bits (350), Expect = 3e-40
 Identities = 86/249 (34%), Positives = 126/249 (50%), Gaps = 11/249 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +  GIG   A RL  EGA VV++     +   A   +  +    + +   
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGARVVVADI---DGGAAQAVVAQIAGGALALRVD 57

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++EQ    L ++ VE++G +D+ V NA        ++ T  +V D+   IN++ + L  
Sbjct: 58  VTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLTPAIIDTDLAVWDQTMAINLRGTFLCC 117

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM-APDTRVNC 186
           + AAP M  + G S+V +SSIAG         YG +K A+  LT+ LAAE+     R N 
Sbjct: 118 RHAAPRMIARGGGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIRCNA 177

Query: 187 VAPGFVPT-----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
           +APG + T       A            L    L  RLG   ++AAA+ FL SDDAS+IT
Sbjct: 178 LAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDASFIT 237

Query: 242 GETLVVAGG 250
           G+ L V GG
Sbjct: 238 GQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  138 bits (350), Expect = 4e-40
 Identities = 70/253 (27%), Positives = 116/253 (45%), Gaps = 7/253 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           MA    GK A+VT + +G+G   AE L   GA+V  +        +    L+A G     
Sbjct: 1   MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHA 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           I   +++    +   D      G +D  V NA +   +    +      D +  +NV+ +
Sbjct: 61  IAADLADPASVQRFFDAAAAALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGT 119

Query: 126 ILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
            L+++ A PH++   +G  V   S  A +  P   A Y  +K A++G+T++LA E+    
Sbjct: 120 FLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGA-YVASKGAVIGMTRSLARELGGRG 178

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
             VN +APG   T     +  ++     L+G+  L RL    ++A A+ FL SD A ++T
Sbjct: 179 ITVNAIAPGLTATEATAYVPADERHAYYLKGRA-LERLQVPDDVAGAVLFLLSDAARFVT 237

Query: 242 GETLVVAGGMASR 254
           G+ L V GG    
Sbjct: 238 GQLLPVNGGFVMN 250

Length = 250

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score =  136 bits (344), Expect = 2e-39
 Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 7/238 (2%)

Query: 19  ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHVSNEQHRK 77
           A    I   +A+    EGA VV+++        AV++L K L  +VI     V++++   
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADVI--PLDVTSDEDID 60

Query: 78  NLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINVKSSILLMQDAAP 134
            L +K  E  G+ID  V + A++P        L T      K  +I+  S I L + A P
Sbjct: 61  ELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLAKAAKP 120

Query: 135 HMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVP 193
            M +G S+V +S IA  +        GV K AL  L + LA E+     RVN ++ G   
Sbjct: 121 LMNEGGSIVALSYIAAERVFPGYGGMGVAKAALESLARYLAYELGRKGIRVNTISAGPTK 180

Query: 194 THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
           T     + G D + +  E    L R  +   +A A AFL SD A  ITG+ L V GG 
Sbjct: 181 TTAGSGIGGFDKMVEYAEEMAPLGRNASAEEVANAAAFLLSDLARGITGQILYVDGGF 238

Length = 239

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  136 bits (345), Expect = 4e-39
 Identities = 84/254 (33%), Positives = 133/254 (52%), Gaps = 10/254 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           KR + KVAV+T ++ GIG   A  L  EGA V+     +  V + V+K+K+ G +     
Sbjct: 2   KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEA-VSETVDKIKSNGGKAKAYH 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+EQ  K+   +  E++GR+DV   NA V+  A  + +    V DK+  ++++ + L
Sbjct: 61  VDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFL 120

Query: 128 LMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           + +   P M ++G S++  SS +G       + Y   K A++  TK++A E   D  R N
Sbjct: 121 MTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRAN 180

Query: 186 CVAPGFVPTHFAQALLGND------AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            +APG + T     L G          R+  +  T L RLG    +A  + FLASDD+S+
Sbjct: 181 AIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF 240

Query: 240 ITGETLVVAGG-MA 252
           ITGET+ + GG MA
Sbjct: 241 ITGETIRIDGGVMA 254

Length = 272

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  135 bits (343), Expect = 4e-39
 Identities = 84/252 (33%), Positives = 122/252 (48%), Gaps = 18/252 (7%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R +GKVA+VT   +G+GL  A  L  EGA VV+S    +    A  +L   G       
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAKVVLSDILDEEGQAAAAEL---GDAARFFH 57

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV----LDKLWEINVK 123
             V++E     ++D   E +GR+DV V NA +         T E+       +L +IN+ 
Sbjct: 58  LDVTDEDGWTAVVDTAREAFGRLDVLVNNAGIL-----TGGTVETTTLEEWRRLLDINLT 112

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
              L  +   P M++  G S++ +SSI G     A+A Y  +K A+ GLTK+ A E A  
Sbjct: 113 GVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQ 172

Query: 181 --DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
               RVN V PG++ T     LL            T + R G    +A A+ +LASD++S
Sbjct: 173 GYGIRVNSVHPGYIYTPMTDELLI-AQGEMGNYPNTPMGRAGEPDEIAYAVVYLASDESS 231

Query: 239 YITGETLVVAGG 250
           ++TG  LVV GG
Sbjct: 232 FVTGSELVVDGG 243

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  134 bits (338), Expect = 2e-38
 Identities = 77/251 (30%), Positives = 132/251 (52%), Gaps = 12/251 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR---KQKNVDKAVEKLKALGIEVIGI 66
             GKVA++T S+ GIG G A      GA + ++ R   + +   ++  +      +++ +
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE-SVLDKLWEINVKSS 125
           +  ++ E+ +  +I  T+ K+GR+D+ V NA +   A    + ++    DK+  +N+++ 
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGIL--AKGGGEDQDIEEYDKVMNLNLRAV 118

Query: 126 ILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           I L + A PH+ K    +V +SS+AG +    +  Y ++K AL   T+  A E+AP   R
Sbjct: 119 IYLTKLAVPHLIKTKGEIVNVSSVAGGRSFPGVLYYCISKAALDQFTRCTALELAPKGVR 178

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTL----LNRLGTTGNMAAAIAFLASDDASY 239
           VN V+PG + T F + +   +        +      L R GT   +A AIAFLASD +S+
Sbjct: 179 VNSVSPGVIVTGFHRRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFLASDASSF 238

Query: 240 ITGETLVVAGG 250
           ITG+ L V GG
Sbjct: 239 ITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  133 bits (336), Expect = 3e-38
 Identities = 81/240 (33%), Positives = 131/240 (54%), Gaps = 4/240 (1%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           VA+VT    GIG  +A  L   GASVVI+  K +  +     ++  G + IG+ C+V++E
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSE 60

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
           Q  + ++  TV ++G I + V NA         +   E   +  +++N+ S+  L Q  A
Sbjct: 61  QDLEAVVKATVSQFGGITILVNNAGGGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCA 120

Query: 134 PHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
           PHMQK  G +++ ISS++       +A YG +K A+  +T+ LA ++ P   RVN VAPG
Sbjct: 121 PHMQKAGGGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVAPG 180

Query: 191 FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
            V T  A A +    + +A+   T L RLG   ++A A  FL S  +++++G+ L V+GG
Sbjct: 181 AVKTD-ALASVLTPEIERAMLKHTPLGRLGEPEDIANAALFLCSPASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  134 bits (338), Expect = 3e-38
 Identities = 68/263 (25%), Positives = 114/263 (43%), Gaps = 15/263 (5%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
            +++ K   G   +VT    GIG  +AE     GA V +    +  +     +L   G +
Sbjct: 2   AIDLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP--GAK 59

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           V   +  V++    + + D  VE++G +DV V NA +      + +      ++   +N+
Sbjct: 60  VTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNL 119

Query: 123 KSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
                  + A P +     G  ++ +SS+AG         Y  +K A++GL K+LA E+ 
Sbjct: 120 NGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELG 179

Query: 180 P-DTRVNCVAPGFV---------PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
           P   RVN + PG V              Q  +G D + +    K  L R+    ++AA  
Sbjct: 180 PLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATA 239

Query: 230 AFLASDDASYITGETLVVAGGMA 252
            FLAS  A YITG+ + V G + 
Sbjct: 240 LFLASPAARYITGQAISVDGNVE 262

Length = 264

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  134 bits (339), Expect = 4e-38
 Identities = 81/249 (32%), Positives = 124/249 (49%), Gaps = 9/249 (3%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI----SSRKQKNVDKAVEKLKALGIE 62
           + + +GKVA++T    GIG  VA     EGA + I             + VE     G++
Sbjct: 41  SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVE---KEGVK 97

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
            + I   VS+E   K+ +++TV + GR+D+ V NAA       L       LDK ++ N+
Sbjct: 98  CLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNI 157

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
            S   + + A PH+++GS+++   SI GY+    +  Y  TK A+   T++LA  +    
Sbjct: 158 YSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKG 217

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN VAPG + T    +    + V +     T + R G    +A A  FLAS D+SYIT
Sbjct: 218 IRVNAVAPGPIWTPLIPSDFDEEKVSQ-FGSNTPMQRPGQPEELAPAYVFLASPDSSYIT 276

Query: 242 GETLVVAGG 250
           G+ L V GG
Sbjct: 277 GQMLHVNGG 285

Length = 290

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  133 bits (336), Expect = 5e-38
 Identities = 82/251 (32%), Positives = 125/251 (49%), Gaps = 9/251 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R QGK A++T  T GIGL  A +   EGA V I+ R   +++ A      LG   + I 
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAA---RAELGESALVIR 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
               +   +K L     E +GR+D   +NA V  +A  L    E++ D+ +  NVK    
Sbjct: 59  ADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKFAP-LEDWDEAMFDRSFNTNVKGPYF 117

Query: 128 LMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           L+Q   P +   +S+V   SI  +      ++Y  +K ALL L K L+ E+ P   RVN 
Sbjct: 118 LIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNA 177

Query: 187 VAPGFVPTHFAQALLGNDAVRKAL----EGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           V+PG V T     L   +A   A+    +    L R GT   +A A+ +LASD++++I G
Sbjct: 178 VSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVG 237

Query: 243 ETLVVAGGMAS 253
             ++V GGM++
Sbjct: 238 SEIIVDGGMSN 248

Length = 249

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  132 bits (334), Expect = 1e-37
 Identities = 83/252 (32%), Positives = 129/252 (51%), Gaps = 13/252 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
           R  GKVA++T    GIG   A      GA VVI+       D A + +   LG   I  +
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGARVVIADID----DDAGQAVAAELGDPDISFV 56

Query: 68  -CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSS 125
            C V+ E   +  +D  V ++GR+D+   NA V       +L+T     +++ ++NV  +
Sbjct: 57  HCDVTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGA 116

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
            L  + AA  M   K  S+V ++S+AG         Y  +K A+LGLT++ A E+     
Sbjct: 117 FLGTKHAARVMIPAKKGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGI 176

Query: 183 RVNCVAPGFVPTHFAQALLG--NDAVRKALEGK-TLLNRLGTTGNMAAAIAFLASDDASY 239
           RVNCV+P  V T    A  G  ++A+ +A+ G   L        ++AAA+ +LASDD+ Y
Sbjct: 177 RVNCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRY 236

Query: 240 ITGETLVVAGGM 251
           ++G+ LVV GG+
Sbjct: 237 VSGQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 1e-37
 Identities = 96/277 (34%), Positives = 127/277 (45%), Gaps = 51/277 (18%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
            M +RF GKV VVT + QGIG GVA R   EGA VV+  R +  V +   +L+A G E +
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAAGGEAL 59

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA----VNPYA--------ADLLKTKES 112
            +   +      +  +   VE +GRIDV + N        P+         A++   + S
Sbjct: 60  ALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEI---RRS 116

Query: 113 VLDKLWEINVKSSILLMQDAA-PHM--QKGSSVVFISSIAG---YQPPSAMAMYGVTKTA 166
           +   LW             A  PHM  Q G ++V +SSIA     + P + A  GV    
Sbjct: 117 LFPTLW----------CCRAVLPHMLAQGGGAIVNVSSIATRGINRVPYSAAKGGVN--- 163

Query: 167 LLGLTKALAAEMAPD-TRVNCVAPG-------FVPTHFAQ-----ALLGNDAVRKALEGK 213
              LT +LA E A    RVN VAPG        VP + A             V + L+  
Sbjct: 164 --ALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLD-S 220

Query: 214 TLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
           +L+ R GT     AAI FLASD+ASYITG  L V GG
Sbjct: 221 SLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score =  132 bits (334), Expect = 1e-37
 Identities = 80/245 (32%), Positives = 121/245 (49%), Gaps = 10/245 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIE-VIGIIC 68
             KVA++T   + IG  +A  L   G  V I   +     D    +L AL       +  
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQA 64

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +      L+   V  +GR+D  V NA+ + Y   L    E+  D L+  N+K+   L
Sbjct: 65  DLLDPDALPELVAACVAAFGRLDALVNNAS-SFYPTPLGSITEAQWDDLFASNLKAPFFL 123

Query: 129 MQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            Q AAP ++K   ++V I+ I   +P     +Y   K AL  LT++LA E+AP+ RVN V
Sbjct: 124 SQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAV 183

Query: 188 APGFV--PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           APG +  P         ++  R+A+  +T L R+GT  ++A A+ FL   DAS+ITG+ L
Sbjct: 184 APGAILWPEDGNS---FDEEARQAILARTPLKRIGTPEDIAEAVRFLL-ADASFITGQIL 239

Query: 246 VVAGG 250
            V GG
Sbjct: 240 AVDGG 244

Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 1e-37
 Identities = 84/256 (32%), Positives = 123/256 (48%), Gaps = 17/256 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R QGKVA++T +  GIG  VAER   EGA VVI+        +A      +G   I + 
Sbjct: 2   MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADI---KPARARLAALEIGPAAIAVS 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+ +     ++   VE++G ID+   NAA+    A +L       D+L+ +NVK    
Sbjct: 59  LDVTRQDSIDRIVAAAVERFGGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFF 117

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           LMQ  A HM    +G  ++ ++S AG +  + ++ Y  TK A++  T++ A  +      
Sbjct: 118 LMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGIN 177

Query: 184 VNCVAPGFVPT-HFAQ--ALLGNDAVRKALEGKTL------LNRLGTTGNMAAAIAFLAS 234
           VN +APG V T  + Q  AL      R   E K L      L R+G   ++     FLAS
Sbjct: 178 VNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS 237

Query: 235 DDASYITGETLVVAGG 250
            DA YI  +T  V GG
Sbjct: 238 ADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  132 bits (333), Expect = 2e-37
 Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 11/252 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKV VV+    G+G  +A R    GA VV+++R  + +D+   ++  LG   + +   
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +++E    NL+   +E++GR+D  V NA   P    L     +    + E+NV  ++ L 
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLT 122

Query: 130 QDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           Q   P + + G S+V I+S+           Y + K ALL  +++LA E+ P   RVN V
Sbjct: 123 QAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSV 182

Query: 188 APGF-----VPTHF----AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           APG+     +  +F     +  +  + +       + L RL T   +A+A+ FLASD A 
Sbjct: 183 APGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLAR 242

Query: 239 YITGETLVVAGG 250
            ITG+TL V  G
Sbjct: 243 AITGQTLDVNCG 254

Length = 258

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  131 bits (331), Expect = 3e-37
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 20/258 (7%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT   QGIG G+AERL  +G +V ++   ++   +  +++   G + +     VS+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSD 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           +    + ID+  EK+G  DV V NA V P    +L+  E  L K++ +NVK  +  +Q A
Sbjct: 61  KDQVFSAIDQAAEKFGGFDVMVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAA 119

Query: 133 APHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   +K   G  ++  +SIAG++    ++ Y  TK A+ GLT+  A E+AP    VN   
Sbjct: 120 ARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYC 179

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTL------------LNRLGTTGNMAAAIAFLASDD 236
           PG V T   + +   D     + GK +            L R     ++A  ++FLAS+D
Sbjct: 180 PGIVKTPMWEEI---DEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASED 236

Query: 237 ASYITGETLVVAGGMASR 254
           + YITG++++V GGM   
Sbjct: 237 SDYITGQSILVDGGMVYN 254

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  136 bits (345), Expect = 3e-37
 Identities = 86/249 (34%), Positives = 127/249 (51%), Gaps = 9/249 (3%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           Q +V +VT +  GIG    +R    G  VV++ R   NV++A E+  +LG +   +   V
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADR---NVERARERADSLGPDHHALAMDV 60

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSSILLM 129
           S+E   +   ++   ++GRIDV V NA V +P     L T      +L  IN+  + L+ 
Sbjct: 61  SDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVA 120

Query: 130 QDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++A   M     G+++V ++S AG         Y  +K A++ LT++LA E A    RVN
Sbjct: 121 REALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVN 180

Query: 186 CVAPGFVPTHFAQALLGNDAV-RKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
            V PG+V T     L     +   A+  +  L RLG    +A A+ FLASD ASYITG T
Sbjct: 181 AVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITGST 240

Query: 245 LVVAGGMAS 253
           LVV GG   
Sbjct: 241 LVVDGGWTV 249

Length = 520

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score =  131 bits (330), Expect = 3e-37
 Identities = 88/248 (35%), Positives = 127/248 (51%), Gaps = 10/248 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            GK+ +VT  ++GIG  +A+     GA V+IS+RK +    A E+L A G E I I   +
Sbjct: 5   AGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYG-ECIAIPADL 63

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           S+E+  + L+ +  E+  R+DV V NA    + A L    ES  DK+ +INVKS   L Q
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAGAT-WGAPLEAFPESGWDKVMDINVKSVFFLTQ 122

Query: 131 DAAPHMQKGSS------VVFISSIAGYQPPSAMAM-YGVTKTALLGLTKALAAEMAPD-T 182
              P ++  ++      V+ I SIAG          YG +K A+  LT+ LA E+A +  
Sbjct: 123 ALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEHI 182

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
            VN +APG  P+     LL + A  +A E    L R G   +MA     LAS   +Y+TG
Sbjct: 183 TVNAIAPGRFPSKMTAFLLNDPAALEAEEKSIPLGRWGRPEDMAGLAIMLASRAGAYLTG 242

Query: 243 ETLVVAGG 250
             + V GG
Sbjct: 243 AVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  130 bits (330), Expect = 4e-37
 Identities = 70/252 (27%), Positives = 120/252 (47%), Gaps = 14/252 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GK A+VT +  GIGL +A  L   GA+VV++   ++  + A +     G  VI +   V+
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVT 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            E    ++I     ++G +D+ V NA +  + A + +      D++  + + S+   ++ 
Sbjct: 61  KEDEIADMIAAAAAEFGGLDILVNNAGIQ-HVAPIEEFPPEDWDRIIAVMLTSAFHTIRA 119

Query: 132 AAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           A PHM+K     ++ I+S  G       + Y   K  L+GLTK LA E+A     VN + 
Sbjct: 120 ALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAIC 179

Query: 189 PGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           PG+V T   +  + +            +R+ +       R  T   +A    +LASD A+
Sbjct: 180 PGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQPTKRFVTVDEVAETALYLASDAAA 239

Query: 239 YITGETLVVAGG 250
            ITG+ +V+ GG
Sbjct: 240 QITGQAIVLDGG 251

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 6e-37
 Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 17/257 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           +++R  G+VAV+T    GIGL  A RL  EGA+VV+      ++D    K  A  +  + 
Sbjct: 1   LSQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVG-----DIDPEAGKAAADEVGGLF 55

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADL-LKTKESVLDKLWEINVKS 124
           +   V++E     L D   E YG +D+   NA ++P   D  L T      ++ ++N+ S
Sbjct: 56  VPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTS 115

Query: 125 SILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
             L  + A PHM    KGS +   S +A     ++   Y  +K  +L +++ L  + A  
Sbjct: 116 VYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQ 175

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL----LNRLGTTGNMAAAIAFLASDD 236
             RVN + PG V T   Q L   D  R A   + L    + R      +AAA+AFLASDD
Sbjct: 176 GIRVNALCPGPVNTPLLQELFAKDPERAA---RRLVHVPMGRFAEPEEIAAAVAFLASDD 232

Query: 237 ASYITGETLVVAGGMAS 253
           AS+IT  T +V GG++ 
Sbjct: 233 ASFITASTFLVDGGISG 249

Length = 255

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 6e-37
 Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 10/249 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GKVA++T ++ GIG   A+    EGA VV+ +R+Q  +D+ V +++A G E + +  
Sbjct: 3   RLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAG 62

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +E + K L+   VE++G +D+   NA        + +       +    N+ S+ L 
Sbjct: 63  DVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLG 122

Query: 129 MQDAAPHMQK--GSSVVFISSIAGYQPPSA----MAMYGVTKTALLGLTKALAAEMAPD- 181
            +   P M    G S++F S+  G+   +A    MA Y  +K  L+GLT+ LAAE     
Sbjct: 123 AKHQIPAMLARGGGSLIFTSTFVGH---TAGFPGMAAYAASKAGLIGLTQVLAAEYGAQG 179

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN + PG   T   +A+         + G   L R+     +A A  FLASD AS++T
Sbjct: 180 IRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVT 239

Query: 242 GETLVVAGG 250
           G  L+V GG
Sbjct: 240 GTALLVDGG 248

Length = 254

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score =  129 bits (327), Expect = 7e-37
 Identities = 73/242 (30%), Positives = 117/242 (48%), Gaps = 12/242 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVS 71
            VA+VT + + IG  +AE L  EG  VV+   + +    +  ++L AL    + +   +S
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +     +L+      +GR DV V NA+   Y   L +  E    +L+ IN+K+  LL+Q 
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAF-YPTPLGQGSEDAWAELFGINLKAPYLLIQA 119

Query: 132 AAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
            A     GS   S++ I      +P +    Y ++K AL GLT++ A E+AP+ RVN +A
Sbjct: 120 FAR-RLAGSRNGSIINIIDAMTDRPLTGYFAYCMSKAALEGLTRSAALELAPNIRVNGIA 178

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG +          +   R+    K  L R  +   +A A+ FL   +  YITG+ + V 
Sbjct: 179 PGLILLPEDM----DAEYRENALRKVPLKRRPSAEEIADAVIFLLDSN--YITGQIIKVD 232

Query: 249 GG 250
           GG
Sbjct: 233 GG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  129 bits (326), Expect = 1e-36
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 8/246 (3%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKVA+VT    GIG  +       G  VV +   ++   +  +  +A G  +  +   V+
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDKVVFADIDEE---RGADFAEAEGPNLFFVHGDVA 57

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +E   K ++   +EK GRIDV V NAA  +      L  +E   D++  +N+     L +
Sbjct: 58  DETLVKFVVYAMLEKLGRIDVLVNNAARGSKGILSSLLLEE--WDRILSVNLTGPYELSR 115

Query: 131 DAAPHMQKGSSVVF-ISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
                + K    +  I+S   +Q       Y  +K  L+ LT ALA  + PD RVNC++P
Sbjct: 116 YCRDELIKNKGRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPDIRVNCISP 175

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           G++ T   Q       + +    +    R+GT  ++A  + FL   DA +ITGET +V G
Sbjct: 176 GWINTT-EQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAGFITGETFIVDG 234

Query: 250 GMASRL 255
           GM  ++
Sbjct: 235 GMTKKM 240

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  128 bits (324), Expect = 2e-36
 Identities = 80/249 (32%), Positives = 124/249 (49%), Gaps = 18/249 (7%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            GKVA++TA+ QGIG  +A     EGA+V+ +       D   EKLK L  E    I   
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIAT-------DINEEKLKEL--ERGPGITTR 51

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
             +   K  +    ++ GRIDV    A    + + +L  ++   D    +NV+S  L+++
Sbjct: 52  VLDVTDKEQVAALAKEEGRIDVLFNCAGFVHHGS-ILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 131 DAAPHM--QKGSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
              P M  +K  S++ +SS+A   +      +Y  TK A++GLTK++AA+ A    R N 
Sbjct: 111 AVLPKMLARKDGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNA 170

Query: 187 VAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           + PG V T       QA    +   KA   +  L RL T   +AA   +LASD+++Y+TG
Sbjct: 171 ICPGTVDTPSLEERIQAQPDPEEALKAFAARQPLGRLATPEEVAALAVYLASDESAYVTG 230

Query: 243 ETLVVAGGM 251
             +V+ GG 
Sbjct: 231 TAVVIDGGW 239

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 4e-36
 Identities = 85/251 (33%), Positives = 125/251 (49%), Gaps = 13/251 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGI 66
           R  G+VA+VT +  GIG   A+    EGA VV++ R   + + A     A+  G      
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADR---DAEAAERVAAAIAAGGRAFAR 58

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              V + +  + L+D    ++GR+DV V NA        ++ T E+  D +  +NV    
Sbjct: 59  QGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFG-CGGTVVTTDEADWDAVMRVNVGGVF 117

Query: 127 LLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           L  + A P MQ+  G S+V  +S          A Y  +K A+  LT+A+A + A D  R
Sbjct: 118 LWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 184 VNCVAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           VN VAPG + T             +A+R+AL  +  +NR GT   +A A  FLASD++S+
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSF 237

Query: 240 ITGETLVVAGG 250
            TG TLVV GG
Sbjct: 238 ATGTTLVVDGG 248

Length = 252

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 4e-36
 Identities = 82/259 (31%), Positives = 130/259 (50%), Gaps = 12/259 (4%)

Query: 5   NMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           ++ +RF   G+VA+VT S +G+G  +A  L   GA V+++ R    ++ AV  L+A G  
Sbjct: 2   SILQRFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGA 61

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD---LLKTKESVLDKLWE 119
              +   +++E+       +   ++GR+D+ V N      A D   L +  ++ +  L E
Sbjct: 62  AEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVG----ARDRRPLAELDDAAIRALLE 117

Query: 120 INVKSSILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
            ++ + ILL + AA  M++     ++ I+SIAG    +  A+Y   K  L GL +ALAAE
Sbjct: 118 TDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAE 177

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
             P     N +APG+  T    A+  + AV   L  +T L R G    +A A  FLAS  
Sbjct: 178 FGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPA 237

Query: 237 ASYITGETLVVAGGMASRL 255
           ASY+ G  L V GG +   
Sbjct: 238 ASYVNGHVLAVDGGYSVHF 256

Length = 256

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 8e-36
 Identities = 79/256 (30%), Positives = 124/256 (48%), Gaps = 16/256 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVI 64
           M    +GKV V+T  + G+G  +A R G E A VVI+ R  ++  +   E++K  G E I
Sbjct: 1   MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAI 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLD---KLWEI 120
            +   V+ E    NLI   V+++G +DV + NA + N        + E  L+   K+   
Sbjct: 61  AVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVP-----SHEMSLEDWNKVINT 115

Query: 121 NVKSSILLMQDA----APHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           N+  + L  ++A      H  KG +++ +SS+    P      Y  +K  +  +T+ LA 
Sbjct: 116 NLTGAFLGSREAIKYFVEHDIKG-NIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAM 174

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E AP   RVN + PG + T        +   R  +E    +  +G    +AA  A+LAS 
Sbjct: 175 EYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASS 234

Query: 236 DASYITGETLVVAGGM 251
           +ASY+TG TL   GGM
Sbjct: 235 EASYVTGITLFADGGM 250

Length = 261

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  127 bits (320), Expect = 1e-35
 Identities = 81/254 (31%), Positives = 122/254 (48%), Gaps = 8/254 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVI 64
              R+  KV +VT  ++GIG G+       GA VV  +R +        +L   G     
Sbjct: 3   SGLRYADKVVIVTGGSRGIGRGIVRAFVENGAKVVFCARGEAAGQALESELNRAGPGSCK 62

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + C V+ E+  K LI  TVE++GRID  V NA  +P      +T       L  +N+ S
Sbjct: 63  FVPCDVTKEEDIKTLISVTVERFGRIDCLVNNAGWHPPHQTTDETSAQEFRDLLNLNLIS 122

Query: 125 SILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L  + A PH++K   +++ +SS+ G       A Y  TK A+  +TKALA + +    
Sbjct: 123 YFLASKYALPHLRKSQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGV 182

Query: 183 RVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           RVNC++PG + T   + L        A  K  E   LL R+GT      A  FLA+ +A+
Sbjct: 183 RVNCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAA-EAT 241

Query: 239 YITGETLVVAGGMA 252
           + TG  L+++GG  
Sbjct: 242 FCTGIDLLLSGGAE 255

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  126 bits (319), Expect = 2e-35
 Identities = 83/264 (31%), Positives = 125/264 (47%), Gaps = 25/264 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVI 64
             +G+VA++T    G+G  + ER   EGA V +       +D++ EK+  L    G  V+
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAV-------LDRSAEKVAELRADFGDAVV 53

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL----DKLWEI 120
           G+   V +    +  + + VE++G++D F+ NA +  Y+  L+   E  L    D+L+ I
Sbjct: 54  GVEGDVRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHI 113

Query: 121 NVKSSILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           NVK  IL  + A P +     SV+F  S AG+ P     +Y  +K A++GL K LA E+A
Sbjct: 114 NVKGYILGAKAALPALYATEGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELA 173

Query: 180 PDTRVNCVAPGFVPTH---FAQALLGNDAVRKA-----LEGKTLLNRLGTTGNMAAAIAF 231
           P  RVN VAPG + T     A    G  ++        L+    L       +   A  F
Sbjct: 174 PHIRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPLGFAPEPEDYTGAYVF 233

Query: 232 LAS-DDASYITGETLVVAGGMASR 254
           LAS  D    TG  +   GGM  R
Sbjct: 234 LASRGDNRPATGTVINYDGGMGVR 257

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  133 bits (336), Expect = 2e-35
 Identities = 78/265 (29%), Positives = 121/265 (45%), Gaps = 24/265 (9%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
            K   GKVA+VT +  GIG   A+RL  EGA VV++   ++  + A  +L       +G+
Sbjct: 417 PKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPD-RALGV 475

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
            C V++E   +   ++    +G +D+ V NA +   +  + +T +    + +++N     
Sbjct: 476 ACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHF 534

Query: 127 LLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
           L+ ++A   M     G S+VFI+S     P      YG  K A L L + LA E+ PD  
Sbjct: 535 LVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGI 594

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKA-----------LEG----KTLLNRLGTTGNMAA 227
           RVN V P  V      + +      +A           LE     + LL R  T  ++A 
Sbjct: 595 RVNGVNPDAV---VRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAE 651

Query: 228 AIAFLASDDASYITGETLVVAGGMA 252
           A+ FLAS   S  TG  + V GG A
Sbjct: 652 AVVFLASGLLSKTTGAIITVDGGNA 676

Length = 681

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  126 bits (317), Expect = 3e-35
 Identities = 82/254 (32%), Positives = 126/254 (49%), Gaps = 13/254 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           RF  KVA+VT +  GIG   AE L  EGASVV++    +  ++  +++ A G   I +  
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQV 62

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV----NPYAADLLKTKESVLDKLWEINVKS 124
            VS+    K + D TV  +G ID  V NAA+          L+        K   +N+  
Sbjct: 63  DVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDL--LITVPWDYYKKFMSVNLDG 120

Query: 125 SILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PD 181
           +++  +    HM K  G ++V  SS A +   +    YG+ K  L GLT+ LA E+   +
Sbjct: 121 ALVCTRAVYKHMAKRGGGAIVNQSSTAAWLYSN---FYGLAKVGLNGLTQQLARELGGMN 177

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN +APG + T   + +   + V   ++G   L+R+GT  ++     FL SD+AS+IT
Sbjct: 178 IRVNAIAPGPIDTEATRTVTPKEFVADMVKG-IPLSRMGTPEDLVGMCLFLLSDEASWIT 236

Query: 242 GETLVVAGGMASRL 255
           G+   V GG   R 
Sbjct: 237 GQIFNVDGGQIIRS 250

Length = 250

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  128 bits (323), Expect = 3e-34
 Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 13/248 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            +V  +T   +GIG  VA+R    G  ++I  R  +   K  E   ALG E + +   ++
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAE---ALGDEHLSVQADIT 325

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E   ++   +   ++GR+DV V NA +       L+       +++++N+  +    + 
Sbjct: 326 DEAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARA 385

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
           AA  M +G  +V + SIA          Y  +K A+  L+++LA E AP   RVN VAPG
Sbjct: 386 AARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPG 445

Query: 191 FVPTHFAQALLGN-----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           ++ T    AL  +     D++R+    +  L RLG    +A AIAFLAS  ASY+ G TL
Sbjct: 446 YIETPAVLALKASGRADFDSIRR----RIPLGRLGDPEEVAEAIAFLASPAASYVNGATL 501

Query: 246 VVAGGMAS 253
            V GG  +
Sbjct: 502 TVDGGWTA 509

Length = 520

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  123 bits (310), Expect = 4e-34
 Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 24/257 (9%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICH 69
           + K+ ++T +   IG    + L   GA ++++      +++  E+L  L    VI +   
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLILADINAPALEQLKEELTNLYKNRVIALELD 60

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSIL 127
           +++++  K LI+  +EK+GRID+ + NA  +P  + +   +      +++  +N+  + L
Sbjct: 61  ITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAFL 120

Query: 128 LMQDAAPHM--QKGSSVVFISSIAG--------YQPPSAMAM---YGVTKTALLGLTKAL 174
             Q        Q   S++ I+SI G        Y+    M     Y V K  ++ LTK L
Sbjct: 121 CSQAFIKLFKKQGKGSIINIASIYGVIAPDFRIYENTQ-MYSPVEYSVIKAGIIHLTKYL 179

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A   A    RVN ++PG +  +     L           K  L R+    ++  AI FL 
Sbjct: 180 AKYYADTGIRVNAISPGGILNNQPSEFLEK------YTKKCPLKRMLNPEDLRGAIIFLL 233

Query: 234 SDDASYITGETLVVAGG 250
           SD +SY+TG+ LV+ GG
Sbjct: 234 SDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 4e-34
 Identities = 76/248 (30%), Positives = 119/248 (47%), Gaps = 11/248 (4%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
               GKVA+VT     IG  VA  L   GA V I      N         +LG     I 
Sbjct: 2   IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAA---SLGERARFIA 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVKSSI 126
             ++++   +  +   V ++GR+D+ V  A    Y  D L  ++   L  L ++N+ S+ 
Sbjct: 59  TDITDDAAIERAVATVVARFGRVDILVNLACT--YLDDGLASSRADWLAAL-DVNLVSAA 115

Query: 127 LLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           +L Q A PH+ + G ++V  +SI+     +   +Y  +K A+  LT+++A ++APD  RV
Sbjct: 116 MLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRV 175

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKT--LLNRLGTTGNMAAAIAFLASDDASYITG 242
           N V+PG+  +     L G D  +         LL R+G    +A  +AFL SD AS++TG
Sbjct: 176 NSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG 235

Query: 243 ETLVVAGG 250
               V GG
Sbjct: 236 ADYAVDGG 243

Length = 261

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  123 bits (310), Expect = 6e-34
 Identities = 73/258 (28%), Positives = 118/258 (45%), Gaps = 18/258 (6%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G+VA++T    GIG  + ER   EGA V +  R   + +K     +  G  V+ +   V+
Sbjct: 6   GQVALITGGGSGIGRALVERFLAEGARVAVLER---SAEKLASLRQRFGDHVLVVEGDVT 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDK----LWEINVKSSIL 127
           +    +  +D+TV+ +G++D FV NA +  Y   L+      LD     ++ +NVK  +L
Sbjct: 63  SYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLL 122

Query: 128 LMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
             + A P ++  G S++F  S + + P     +Y  +K A++GL + LA E+AP  RVN 
Sbjct: 123 GAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPKIRVNG 182

Query: 187 VAPGFVPTHFA-QALLGNDAVR--------KALEGKTLLNRLGTTGNMAAAIAFLASD-D 236
           VAPG   T     A LG               +   T L       +       LAS  +
Sbjct: 183 VAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLASRRN 242

Query: 237 ASYITGETLVVAGGMASR 254
           +  +TG  +   GG+  R
Sbjct: 243 SRALTGVVINADGGLGIR 260

Length = 263

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  122 bits (308), Expect = 6e-34
 Identities = 82/253 (32%), Positives = 123/253 (48%), Gaps = 14/253 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            KVA+VT + QGIG  +A+RL  +G  V I    ++    A +KL   G + I +   VS
Sbjct: 2   SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVS 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +       + + V+ +G ++V V NA V P    +    E   DK++ INV   I  +Q 
Sbjct: 62  DRDQVFAAVRQVVDTFGDLNVVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQA 120

Query: 132 AAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           A    +K   G  ++  +S AG      +A+Y  TK A+ GLT+  A ++A +   VN  
Sbjct: 121 AQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNAY 180

Query: 188 APGFV--PTHFAQALLGNDAVRKALEGKT-------LLNRLGTTGNMAAAIAFLASDDAS 238
           APG V  P  F  A    +   K  E           L RL    ++A  ++FLA  D+ 
Sbjct: 181 APGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD 240

Query: 239 YITGETLVVAGGM 251
           YITG+T++V GGM
Sbjct: 241 YITGQTIIVDGGM 253

Length = 256

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  121 bits (306), Expect = 1e-33
 Identities = 77/245 (31%), Positives = 120/245 (48%), Gaps = 6/245 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
             KVA+VT +++GIG  +A RL  +G +V ++ +      D+ V +++A G   I +   
Sbjct: 4   SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQAD 63

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++      L D     +GRIDV V NA V P    +        D+    N++ + +++
Sbjct: 64  VADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLGT-IADFDLEDFDRTIATNLRGAFVVL 122

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA H+ +G  ++ +S+     P      Y  +K A+ GL   LA E+      VN VA
Sbjct: 123 REAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVA 182

Query: 189 PGFVPTHFAQALLGNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           PG  P        G  A     L G   L RLGT   +AAA+AFLA  D +++ G+ L V
Sbjct: 183 PG--PVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVLRV 240

Query: 248 AGGMA 252
            GG A
Sbjct: 241 NGGFA 245

Length = 245

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score =  121 bits (305), Expect = 1e-33
 Identities = 66/242 (27%), Positives = 117/242 (48%), Gaps = 7/242 (2%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC-HVS 71
           K+A+VT + +GIG  +A  L  +G  V+ +     +  K   +      + + +    V+
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVT 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + +     + +  E+ G +D+ V NA +   +     + +   D +   N+ S   + Q 
Sbjct: 63  DTEECAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVI-NTNLNSVFNVTQP 121

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               M  Q    ++ ISS+ G +       Y   K  ++G TKALA+E A     VNC+A
Sbjct: 122 LFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIA 181

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG++ T   + +     V +++  +  + RLGT   +AAA+AFL S+ A +ITGET+ + 
Sbjct: 182 PGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISIN 239

Query: 249 GG 250
           GG
Sbjct: 240 GG 241

Length = 245

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 2e-33
 Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 23/250 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           R  GKVA+VT  TQG+G  +A      GA  +VI  R  +  +    +L+ALG + + + 
Sbjct: 3   RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQ 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+ +  + ++    E +GR+D  V NAA       +L T   + D+ + +NV++   
Sbjct: 63  ADLSDVEDCRRVVAAADEAFGRLDALV-NAAGLTDRGTILDTSPELFDRHFAVNVRAPFF 121

Query: 128 LMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA-AEMAPDTR 183
           LMQ+A   M++     ++V I S++ +     +A Y  +K AL  LT+  A A +    R
Sbjct: 122 LMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIR 181

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEG----------KTL-LNRLGTTGNMAAAIAFL 232
           VN +  G++ T       G D +++   G           T    RL     +A A+AFL
Sbjct: 182 VNGLNIGWMATE------GEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFL 235

Query: 233 ASDDASYITG 242
            SD++  +TG
Sbjct: 236 LSDESGLMTG 245

Length = 260

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score =  121 bits (304), Expect = 3e-33
 Identities = 85/260 (32%), Positives = 121/260 (46%), Gaps = 25/260 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           RF+GKV VVT + QGIG GVAERL  EGA V++  R +   +   E + A G        
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGARVLLVDRSELVHEVLAE-ILAAGDAAHVHTA 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +      + ++   VE++GR+DV + N     +A      +E  ++     ++  ++  
Sbjct: 60  DLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLWC 119

Query: 129 MQDAAPHM--QKGSSVVFISSIA---GYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
            +   PHM  ++   +V +SSIA    Y+ P     Y   K  +  LT +LA E A D  
Sbjct: 120 CRAVLPHMLERQQGVIVNVSSIATRGIYRIP-----YSAAKGGVNALTASLAFEHARDGI 174

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALE------------GKTLLNRLGTTGNMAAAIA 230
           RVN VAPG       + +  N A     E              +L+ R GT      AI 
Sbjct: 175 RVNAVAPGGTEAP-PRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTIDEQVRAIL 233

Query: 231 FLASDDASYITGETLVVAGG 250
           FLASD+ASYITG  L V GG
Sbjct: 234 FLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  121 bits (305), Expect = 3e-33
 Identities = 76/266 (28%), Positives = 122/266 (45%), Gaps = 22/266 (8%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            + KVAV+T  T  +G  +A  L   GA V    R Q+  DK  +++ ALG   I +   
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALGGRAIALAAD 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA-------------DLLKTKESVLDK 116
           V +    +   ++ V ++G +D+ +  A  N   A             +     E   + 
Sbjct: 63  VLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWEF 122

Query: 117 LWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
           ++++N+  S L  Q     M  QKG S++ ISS+  + P + +  Y   K A+   T+ L
Sbjct: 123 VFDLNLNGSFLPSQVFGKDMLEQKGGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQWL 182

Query: 175 AAEMA-PDTRVNCVAPGFVPTHFAQALLGND-----AVRKALEGKTLLNRLGTTGNMAAA 228
           A E A    RVN +APGF  T   + LL N           + G+T + R G    +  A
Sbjct: 183 AVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILGRTPMGRFGKPEELLGA 242

Query: 229 IAFLASDDAS-YITGETLVVAGGMAS 253
           + FLAS+ AS ++TG  + V GG ++
Sbjct: 243 LLFLASEKASSFVTGVVIPVDGGFSA 268

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  119 bits (301), Expect = 4e-33
 Identities = 70/253 (27%), Positives = 111/253 (43%), Gaps = 22/253 (8%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M    QGKV  +T    G+G   A  L   GA V +  R    + + +  + A  + + G
Sbjct: 1   MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGG 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA--ADLLKTKESVLDKLWEINVK 123
           I   + + Q  +  +D+   ++GR+D  V  A    +   AD         D+++ +NVK
Sbjct: 61  I--DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVWGTIADG---DADTWDRMYGVNVK 115

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           +++   + A P +    G  +V I + A  +    M  Y   K  +  LT+ALAAE+   
Sbjct: 116 TTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDR 175

Query: 181 DTRVNCVAPGFVPT-HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              VN V P  + T      +   D            +R  T   +AA IAFL SD+A  
Sbjct: 176 GITVNAVLPSIIDTPPNRADMPDAD-----------FSRWVTPEQIAAVIAFLLSDEAQA 224

Query: 240 ITGETLVVAGGMA 252
           ITG ++ V GG+A
Sbjct: 225 ITGASIPVDGGVA 237

Length = 239

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 6e-33
 Identities = 79/265 (29%), Positives = 125/265 (47%), Gaps = 27/265 (10%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M     GK AVVT +  GIG  +A  L   GA+V I+   Q   +   +++   G + IG
Sbjct: 1   MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIG 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA---VNP---YAADLLKTKESVLDKLWE 119
           +   V+NE      IDK  E++G +D+ V NA    VNP   Y+        +   K+  
Sbjct: 61  VAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSF-------ADWKKMQA 113

Query: 120 INVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           I+V  + L  + A  HM K   G  V+++ S+  ++     + Y   K  LLGL + LA 
Sbjct: 114 IHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAK 173

Query: 177 EMAP-DTRVNCVAPGFVPTHFAQALLG----------NDAVRKALEGKTLLNRLGTTGNM 225
           E A  + R + V PGFV T      +            + V+K + GKT+     T  ++
Sbjct: 174 EGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDV 233

Query: 226 AAAIAFLASDDASYITGETLVVAGG 250
           A  + FL+S  ++ +TG++ VV+ G
Sbjct: 234 AQTVLFLSSFPSAALTGQSFVVSHG 258

Length = 262

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score =  120 bits (302), Expect = 8e-33
 Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 4/245 (1%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            F GK  VV   T GI LG+A+     GA+V ++SR Q+ VD AV +L+  G E +G+  
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +    +    +  +++G IDV V  AA N + A       +    + +I++  +  +
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGN-FPAPAAGMSANGFKTVVDIDLLGTFNV 124

Query: 129 MQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           ++ A P +++ G+S++ IS+   + P    A     K  +  LT+ LA E  P+  RVN 
Sbjct: 125 LKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNS 184

Query: 187 VAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           + PG +  T     L  +  ++ A+     L R GT  ++A A  FLASD ASYITG  L
Sbjct: 185 IVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYITGVVL 244

Query: 246 VVAGG 250
            V GG
Sbjct: 245 PVDGG 249

Length = 264

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score =  119 bits (301), Expect = 2e-32
 Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 3/245 (1%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIGI 66
           R QG+ A++T +  GIG   A     EGA + ++    ++++  + V+ ++A G + + +
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVAL 111

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              + +E   + L+++ V++ G +D+ V  A       D+        D  ++ NV +  
Sbjct: 112 PGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMF 171

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L + A PH+  G+S++   SI  YQP   +  Y  TK A++  TKALA ++A    RVN
Sbjct: 172 WLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVN 231

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            VAPG V T    +             +T + R G    MA     LAS ++SY+TGE  
Sbjct: 232 AVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGEVF 291

Query: 246 VVAGG 250
            V GG
Sbjct: 292 GVTGG 296

Length = 300

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  118 bits (298), Expect = 2e-32
 Identities = 76/252 (30%), Positives = 121/252 (48%), Gaps = 12/252 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           +  GK A++T + QGIG G+A      GA++++     + ++K  ++L   G     ++ 
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVA 61

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +       I +  EK GRID+ V NA V       L   +   D   +IN+K    +
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVC-RLGSFLDMSDEDRDFHIDINIKGVWNV 120

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            +   P M  +K   +V +SS+ G          Y +TK A++GLTK+LA E A    RV
Sbjct: 121 TKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRV 180

Query: 185 NCVAPGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           N + PG+V T  A+++         ++V   +     L RL     +    AFLASD++S
Sbjct: 181 NAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDESS 240

Query: 239 YITGETLVVAGG 250
           Y+TG   V+ GG
Sbjct: 241 YLTGTQNVIDGG 252

Length = 263

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  117 bits (294), Expect = 6e-32
 Identities = 83/248 (33%), Positives = 131/248 (52%), Gaps = 7/248 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           +GKVA+VT +  G+G G+A  L   GA +V + R +    +  ++++ALG   + +   +
Sbjct: 4   EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADL 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           S+ +  K L+D  VE++G ID+ V NA +    AD  +  E   D +  +N+KS   L Q
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGI-IRRADAEEFSEKDWDDVMNVNLKSVFFLTQ 120

Query: 131 DAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
            AA H  K   G  ++ I+S+  +Q    +  Y  +K A+ GLTK LA E A     VN 
Sbjct: 121 AAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNA 180

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           +APG++ T+  QAL  ++    A+  +    R GT  ++     FLAS  + Y+ G TL 
Sbjct: 181 IAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYTLA 240

Query: 247 VAGGMASR 254
           V GG  +R
Sbjct: 241 VDGGWLAR 248

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 7e-32
 Identities = 85/256 (33%), Positives = 119/256 (46%), Gaps = 20/256 (7%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA--LGI 61
            ++A    GKVAVVT    GIG  +AE    +GA V +  R      + V ++ A  LG 
Sbjct: 7   FDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDR-----SEDVAEVAAQLLGG 61

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
              G++C VS+ Q  +  +   +  +GRID+ V +A V   A       E   DK  +IN
Sbjct: 62  NAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAP-AEDVSEEDWDKTIDIN 120

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           +K S L+ Q    HM    G  +V ++S AG         Y  +K  ++G+TK LA E  
Sbjct: 121 LKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWG 180

Query: 180 P-DTRVNCVAPGFVPTHFAQALLGNDA----VRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
           P    VN ++P  V T      LG  A      +  +      R      +AAA  FLAS
Sbjct: 181 PYGITVNAISPTVVLTE-----LGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAALFLAS 235

Query: 235 DDASYITGETLVVAGG 250
           D A+ ITGE LV+ GG
Sbjct: 236 DAAAMITGENLVIDGG 251

Length = 255

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 9e-32
 Identities = 72/256 (28%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEV 63
           M  R  GKVA+VT + QGIG  +A     EGA+V ++       ++A   +     G  V
Sbjct: 1   MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARV 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           + +   V++       +    E +G +DV V NA +N + AD L   +    + + +++ 
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVF-ADPLAMTDEDWRRCFAVDLD 119

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
            +    +   P M  +   S+V I+S   ++       Y V K  LLGLT+AL  E A  
Sbjct: 120 GAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAAR 179

Query: 181 DTRVNCVAPGFVPTHFA----QALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           + RVN +APG++ T        A     A R        + R+G    +A    FLASD+
Sbjct: 180 NVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDE 239

Query: 237 ASYITGETLVVAGGMA 252
           A +I    + + GG +
Sbjct: 240 APFINATCITIDGGRS 255

Length = 260

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 75/247 (30%), Positives = 116/247 (46%), Gaps = 4/247 (1%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G+ A+VT S+QGIG  +AE L   GA V+++ R    +  A E LK  G+    +   V+
Sbjct: 10  GRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVT 69

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    +  ID    + G ID+ V NA +  +   L        ++L   N+ S   + Q 
Sbjct: 70  DHDAVRAAIDAFEAEIGPIDILVNNAGMQ-FRTPLEDFPADAFERLLRTNISSVFYVGQA 128

Query: 132 AAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
            A HM       ++ I+S+        +A Y  TK A+  LTK +A + A    + N +A
Sbjct: 129 VARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIA 188

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG+  T    AL+ +      LE +T   R G    +  A  FLASD +S++ G  L V 
Sbjct: 189 PGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVLYVD 248

Query: 249 GGMASRL 255
           GG+ + L
Sbjct: 249 GGITASL 255

Length = 255

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  116 bits (293), Expect = 1e-31
 Identities = 82/255 (32%), Positives = 128/255 (50%), Gaps = 19/255 (7%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
            + RF+GKVA++T  T+GIG  +AE    EGA V +        +   ++L+  G+  I 
Sbjct: 1   YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSA---ENEAKELREKGVFTIK 57

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
             C V N    K   +   +++GR+DV V NA +  Y     +  E   +K+ +IN+  +
Sbjct: 58  --CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIM-YLMPFEEFDEEKYNKMIKINLNGA 114

Query: 126 ILLMQDAAPHMQ--KGSSVVFISSIAGYQPPS-AMAMYGVTKTALLGLTKALAAEMAP-D 181
           I    +  P ++  K  ++V I+S AG    +     Y +TK  ++ LT+ LA E+    
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 182 TRVNCVAPGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            RVN VAPG+V T      L        + +R+    KT+L   G   ++A  + FLASD
Sbjct: 175 IRVNAVAPGWVETDMT---LSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASD 231

Query: 236 DASYITGETLVVAGG 250
           DA YITG+ +V  GG
Sbjct: 232 DARYITGQVIVADGG 246

Length = 255

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score =  116 bits (291), Expect = 2e-31
 Identities = 74/246 (30%), Positives = 130/246 (52%), Gaps = 6/246 (2%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G+VA+VT + +GIGLG+A  L  EG  VV++   ++   K     KALG     I   V+
Sbjct: 10  GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVA---KALGENAWFIAMDVA 66

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +E      + + + ++GR+D  V NAA+ +P+   L     +  +++  +N+   +LL +
Sbjct: 67  DEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAK 126

Query: 131 DAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP 189
             AP+++    ++V ++S    Q       Y  +K  LL LT ALA  + P+ RVN V+P
Sbjct: 127 HCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGPEIRVNAVSP 186

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           G++      +    + + +A   +    R+GT  ++AA +A+L S  A ++TG+  VV G
Sbjct: 187 GWIDAR-DPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFVVDG 245

Query: 250 GMASRL 255
           GM  ++
Sbjct: 246 GMTRKM 251

Length = 255

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  115 bits (291), Expect = 3e-31
 Identities = 78/251 (31%), Positives = 122/251 (48%), Gaps = 22/251 (8%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           +VA+VTAS  GIG   A  L  +G  + I+    ++   +  E++++ G+        +S
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLS 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE-------INVKS 124
           +       +DK +++ GRIDV V NA           TK   LD  ++       ++V  
Sbjct: 63  DLPEGAQALDKLIQRLGRIDVLVNNAGAM--------TKAPFLDMDFDEWRKIFTVDVDG 114

Query: 125 SILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           + L  Q AA HM K   G  ++ I+S+  + P    + Y   K AL GLTKA+A E+   
Sbjct: 115 AFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEH 174

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
              VN VAPG + T      + +  V+        L R G T  +A+ +A+L S+ ASY 
Sbjct: 175 GILVNAVAPGAIATPMNG--MDDSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYT 232

Query: 241 TGETLVVAGGM 251
           TG++L+V GG 
Sbjct: 233 TGQSLIVDGGF 243

Length = 256

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  115 bits (288), Expect = 4e-31
 Identities = 75/247 (30%), Positives = 126/247 (51%), Gaps = 7/247 (2%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKVA++T    G+G G+A  +GL  A   I         +   +++ALG +   I   + 
Sbjct: 8   GKVAIITGCNTGLGQGMA--IGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLI 65

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            ++   +++ + VE  G ID+ + NA +     DLL+      D +  IN K+   L Q 
Sbjct: 66  QQKDIDSIVSQAVEVMGHIDILINNAGI-IRRQDLLEFGNKDWDDVININQKTVFFLSQA 124

Query: 132 AAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            A    K   G  ++ I+S+  +Q    +  Y  +K+A++GLT+ALA E++  +  VN +
Sbjct: 125 VAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVNAI 184

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APG++ T    AL  + A  +A+  +   +R GT  ++A    FL+S  + Y+TG TL V
Sbjct: 185 APGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGYTLAV 244

Query: 248 AGGMASR 254
            GG  +R
Sbjct: 245 DGGWLAR 251

Length = 251

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  115 bits (290), Expect = 4e-31
 Identities = 88/264 (33%), Positives = 127/264 (48%), Gaps = 22/264 (8%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIE--V 63
           ++R  GKVA+VT    GIG  +       GA V I   +    D   + +  +LG E  V
Sbjct: 13  SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQ----DDLGQNVCDSLGGEPNV 68

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINV 122
               C V+ E      +D TV+K+G +D+ V NA +  P   D+   + S  +K++++NV
Sbjct: 69  CFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNV 128

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           K   L M+ AA  M   K  S+V + S+A          Y  +K A+LGLT+++AAE+  
Sbjct: 129 KGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGK 188

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNM----------AAAI 229
              RVNCV+P  VPT  A A L  D  R            G   N+          A A+
Sbjct: 189 HGIRVNCVSPYAVPTALALAHLPEDE-RTEDALAGFRAFAGKNANLKGVELTVDDVANAV 247

Query: 230 AFLASDDASYITGETLVVAGGMAS 253
            FLASD+A YI+G  L++ GG   
Sbjct: 248 LFLASDEARYISGLNLMIDGGFTC 271

Length = 280

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score =  114 bits (289), Expect = 9e-31
 Identities = 70/268 (26%), Positives = 122/268 (45%), Gaps = 25/268 (9%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVAV+T     +G  +A+ L   GA V I  R Q+  +  V ++KA G E + +   
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKAD 67

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAA---------------VNPYAADLLKTKESVL 114
           V +++  +    + +E +G  D+ + N A               +           E   
Sbjct: 68  VLDKESLEQARQQILEDFGPCDILI-NGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 115 DKLWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK 172
           + ++++N+  ++L  Q  A  M  +KG +++ ISS+  + P + +  Y   K A+   T+
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQ 186

Query: 173 ALAAEMA-PDTRVNCVAPGFVPTHFAQALLGND-----AVRKALEGKTLLNRLGTTGNMA 226
            LA   A    RVN +APGF  T   +ALL N+          +   T + R G    + 
Sbjct: 187 WLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPEELL 246

Query: 227 AAIAFLASDDAS-YITGETLVVAGGMAS 253
             + +LA + AS ++TG  L V GG ++
Sbjct: 247 GTLLWLADEKASSFVTGVVLPVDGGFSA 274

Length = 278

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  113 bits (285), Expect = 1e-30
 Identities = 71/254 (27%), Positives = 108/254 (42%), Gaps = 14/254 (5%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           NMA  F GK  +VT ++ GIG   A  L   GA VV ++R    +D+   +     + + 
Sbjct: 2   NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRL- 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
                V ++      I   +   G  D  V  A +    + L  T E   D++  +N + 
Sbjct: 61  ----DVGDDAA----IRAALAAAGAFDGLVNCAGIASLESALDMTAEG-FDRVMAVNARG 111

Query: 125 SILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           + L+ +  A  M    +G S+V +SS A          Y  +K AL  +T+ L  E+ P 
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH 171

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN V P    T  A     +      +     L R     ++AA I FL SD AS +
Sbjct: 172 GIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASMV 231

Query: 241 TGETLVVAGGMASR 254
           +G +L V GG  +R
Sbjct: 232 SGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score =  113 bits (285), Expect = 2e-30
 Identities = 74/255 (29%), Positives = 123/255 (48%), Gaps = 15/255 (5%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
             +VA+VT +T GIGL +A RLG EG  V + +R ++ +   V++L+  G+E  G  C V
Sbjct: 2   DSEVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRTCDV 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
            +    + L+   V +YG IDV V NA          +  + +   + E N+     + +
Sbjct: 62  RSVPEIEALVAAAVARYGPIDVLVNNAG-RSGGGATAELADELWLDVVETNLTGVFRVTK 120

Query: 131 D---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           +   A   +++G+  ++ I+S  G Q     A Y  +K  ++G TKAL  E+A     VN
Sbjct: 121 EVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 180

Query: 186 CVAPGFVPTHFAQAL---------LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            V PGFV T  A ++         +  +     +  +  L R  T   +A  +A+L  D 
Sbjct: 181 AVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPLGRYVTPEEVAGMVAYLIGDG 240

Query: 237 ASYITGETLVVAGGM 251
           A+ +T + L V GG+
Sbjct: 241 AAAVTAQALNVCGGL 255

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score =  113 bits (284), Expect = 2e-30
 Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVAVVT    G+G G+A  LGL  A   I         + +E++ ALG   + +   
Sbjct: 8   LEGKVAVVTGCDTGLGQGMA--LGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTAD 65

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +        L+++ V ++G ID+ V NA +     D ++  E   D +  +N+KS   + 
Sbjct: 66  LRKIDGIPALLERAVAEFGHIDILVNNAGL-IRREDAIEFSEKDWDDVMNLNIKSVFFMS 124

Query: 130 QDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           Q AA H      G  ++ I+S+  +Q    +  Y  +K+ ++G+T+ +A E A  +  VN
Sbjct: 125 QAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVN 184

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +APG++ T+  Q L  ++     +  +    R G   ++   + FLAS  + YI G T+
Sbjct: 185 AIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYTI 244

Query: 246 VVAGGMASR 254
            V GG  +R
Sbjct: 245 AVDGGWLAR 253

Length = 253

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 2e-30
 Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 13/249 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVI----SSRKQKNVDKAVEKLKALGIEVIGII 67
            +  ++T  + G+G  +A RL  +GA V++      R +   D     ++A G + +G+ 
Sbjct: 6   SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLA 65

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V +    +  +D  VE++GR+D+ V NA +   AA   +      D + ++N+     
Sbjct: 66  FDVRDFAATRAALDAGVEEFGRLDILVNNAGIATDAA-FAELSIEEWDDVIDVNLDGFFN 124

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           + Q A P M   ++G  +V I+S+AG +       Y  +K  L+GLTK LA E+AP    
Sbjct: 125 VTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGIT 184

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN VAPG + T  A      + +   +     + RLG    +AA +AFL SD ASY+TG+
Sbjct: 185 VNAVAPGAINTPMADNAAPTEHLLNPVP----VQRLGEPDEVAALVAFLVSDAASYVTGQ 240

Query: 244 TLVVAGGMA 252
            + V GG  
Sbjct: 241 VIPVDGGFC 249

Length = 249

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score =  111 bits (280), Expect = 7e-30
 Identities = 59/193 (30%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA++T  ++GIG  +AE L  EG  V I++R QK +++A  +L   G  V+G+   
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKG-NVLGLAAD 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA--ADL-LKTKESVLDKLWEINVKSSI 126
           V +E   +  +D  V  +G +DV + NA V  +A   +L  +    V+D     N+  + 
Sbjct: 63  VRDEADVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVID----TNLTGAF 118

Query: 127 LLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
             ++ A P +++ G  ++ ISS+AG    +  A Y  +K  L+G ++A   ++     +V
Sbjct: 119 YTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKV 178

Query: 185 NCVAPGFVPTHFA 197
           + + PG V THF 
Sbjct: 179 STIMPGSVATHFN 191

Length = 237

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 8e-30
 Identities = 81/269 (30%), Positives = 117/269 (43%), Gaps = 43/269 (15%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           QGK+ +VT  + GIGL + + L   GA+VV       N D      +    + +     V
Sbjct: 8   QGKIIIVTGGSSGIGLAIVKELLANGANVV-------NADIHGGDGQHENYQFVP--TDV 58

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVN-------------PYAADLLKTKESVLDKL 117
           S+ +   + + + +EK+GRID  V NA +N              Y  +     E+  DK+
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELN-----EAAFDKM 113

Query: 118 WEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
           + IN K   L+ Q  A  M  Q    +V +SS AG +     + Y  TK AL   T++ A
Sbjct: 114 FNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWA 173

Query: 176 AEMAP-DTRVNCVAPGFV-PTHF-------AQALLGNDAVRKALEG-----KTLLNRLGT 221
            E+   + RV  VAPG +  T         A A      V +   G        L R G 
Sbjct: 174 KELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGK 233

Query: 222 TGNMAAAIAFLASDDASYITGETLVVAGG 250
              +A  + +L SD ASYITG T  +AGG
Sbjct: 234 LSEVADLVCYLLSDRASYITGVTTNIAGG 262

Length = 266

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  110 bits (277), Expect = 2e-29
 Identities = 57/209 (27%), Positives = 98/209 (46%), Gaps = 9/209 (4%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE----VIGII 67
           GK  ++T  + GIG  +A+ L  EGA+V+I +R +  +++AVE+++A        V  I 
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKLEEAVEEIEAEANASGQKVSYIS 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+ +  +    + VEK G  D+ V  A ++              ++  ++N   S+ 
Sbjct: 61  ADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGIS-IPGLFEDLTAEEFERGMDVNYFGSLN 119

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           +     P M  Q+   +VF+SS A        + Y  +K AL GL ++L  E+ P + RV
Sbjct: 120 VAHAVLPLMKEQRPGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV 179

Query: 185 NCVAPGFVPTH-FAQALLGNDAVRKALEG 212
           + V P    T  F +         KA+EG
Sbjct: 180 SVVYPPDTDTPGFEEENKTKPEETKAIEG 208

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score =  110 bits (277), Expect = 2e-29
 Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 27/253 (10%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE---KLKALGIEVIGIICH 69
           ++A+VT    GIG  + +RL  +G  V  +     N ++A     +  ALG +   +   
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGP--NEERAEAWLQEQGALGFDFRVVEGD 58

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL----WE----IN 121
           VS+ +  K  + K   + G IDV V NA +         T+++   K+    W      N
Sbjct: 59  VSSFESCKAAVAKVEAELGPIDVLVNNAGI---------TRDATFKKMTYEQWSAVIDTN 109

Query: 122 VKSSILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           + S   + Q     M++     ++ ISS+ G +       Y   K  ++G TKALA E A
Sbjct: 110 LNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGA 169

Query: 180 P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
                VN ++PG++ T    A+   + V  ++  +  + RLG    +AAA+AFLAS++A 
Sbjct: 170 TKGVTVNTISPGYIATDMVMAM--REDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAG 227

Query: 239 YITGETLVVAGGM 251
           YITG TL + GG+
Sbjct: 228 YITGATLSINGGL 240

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  110 bits (278), Expect = 2e-29
 Identities = 79/255 (30%), Positives = 122/255 (47%), Gaps = 16/255 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M    + KV +VT    GIG  ++ RL  EGA  VI  R   + D+  E+L+AL      
Sbjct: 1   MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD-DEFAEELRALQPRAEF 59

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   ++++   ++ +++TV K+GRID  V NA VN     L   +E+ +  L E N+   
Sbjct: 60  VQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVND-GVGLEAGREAFVASL-ERNLIHY 117

Query: 126 ILLMQDAAPHMQKG-SSVVFISS---IAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
            ++     PH++    ++V ISS   + G    S    Y   K A L LT+  A  +A D
Sbjct: 118 YVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSG---YAAAKGAQLALTREWAVALAKD 174

Query: 182 -TRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLL-NRLGTTGNMAAAIAFLASD 235
             RVN V P  V T   +  +      +A   A+  K  L +R+ T   +A    FL S+
Sbjct: 175 GVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSE 234

Query: 236 DASYITGETLVVAGG 250
            +S+ TG+ L V GG
Sbjct: 235 RSSHTTGQWLFVDGG 249

Length = 258

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score =  109 bits (275), Expect = 3e-29
 Identities = 56/189 (29%), Positives = 92/189 (48%), Gaps = 8/189 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           KVA+VT + +GIG  +  +L   G  +V++++R  +    AVEKL+A G+ V      V+
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           ++   +   D   EKYG +D+ V NA +     D          +  + N   ++ + Q 
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTREQARETMKTNFFGTVDVTQA 120

Query: 132 AAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PDTRVNCVA 188
             P ++K  +  +V +SS  G    +    YGV+K AL  LT+ LA E+     +VN   
Sbjct: 121 LLPLLKKSPAGRIVNVSSGLGSLTSA----YGVSKAALNALTRILAKELKETGIKVNACC 176

Query: 189 PGFVPTHFA 197
           PG+V T   
Sbjct: 177 PGWVKTDMG 185

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  110 bits (276), Expect = 4e-29
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
              GKVA+VT    G+G G A  L   GA ++I++    N D+    ++  G +V  +  
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQV 70

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEINVKSS 125
            ++  +  + ++ + +E++G+ID+ V NA      P    LL+ K+   + + +IN+ S 
Sbjct: 71  DLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAP----LLEYKDEDWNAVMDINLNSV 126

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
             L Q  A  M  Q    ++ I+S+  +Q    +  Y  +K  + GLTKA A E+A  + 
Sbjct: 127 YHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNI 186

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           +VN +APG++ T     +  +      +  +    R G   ++  A  FLAS  + Y+ G
Sbjct: 187 QVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNG 246

Query: 243 ETLVVAGGMASR 254
             L V GG   R
Sbjct: 247 HILAVDGGWLVR 258

Length = 258

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  108 bits (273), Expect = 1e-28
 Identities = 79/247 (31%), Positives = 120/247 (48%), Gaps = 15/247 (6%)

Query: 11  QGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIE-VIGII 67
            GKV +VTA+   GIG   A R   EGA VVIS   ++ + +  ++L A LG+  V  ++
Sbjct: 16  AGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVV 75

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES---VLDKLWEINVKS 124
           C V++E     LID  VE+ GR+DV V NA +      +  T +    VLD    + +  
Sbjct: 76  CDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLD----VTLTG 131

Query: 125 SILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
           +    + A  +M+    G  +V  +S+ G++     A Y   K  ++ LT+  A E A  
Sbjct: 132 TFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEY 191

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             R+N VAP     H   A + +  +   L  +    R      +A  IAFLASD +SY+
Sbjct: 192 GVRINAVAPSIA-MHPFLAKVTSAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYL 250

Query: 241 TGETLVV 247
           TGE + V
Sbjct: 251 TGEVVSV 257

Length = 262

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  108 bits (272), Expect = 1e-28
 Identities = 68/255 (26%), Positives = 105/255 (41%), Gaps = 34/255 (13%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG-----II 67
           KVA++T    GIGL  A+ L  +GA V I  R     ++       L           + 
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAKVAILDR-----NENPGAAAELQAINPKVKATFVQ 55

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP-----YAADLLKTKESVLDKLWEINV 122
           C V++ +       K +EK+GR+D+ + NA +       +A  L    E  +D    +N+
Sbjct: 56  CDVTSWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTID----VNL 111

Query: 123 KSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
              I     A  +M K     G  +V I S+AG  P     +Y  +K  ++G T++LA  
Sbjct: 112 TGVINTTYLALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADL 171

Query: 178 MAPDT--RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           +   T  RVN + PGF  T     L+  +A               +   +A AI +L  D
Sbjct: 172 LEYKTGVRVNAICPGFTNTPLLPDLVAKEAEMLPSAPTQ------SPEVVAKAIVYLIED 225

Query: 236 DASYITGETLVVAGG 250
           D     G   +V GG
Sbjct: 226 DEK--NGAIWIVDGG 238

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  108 bits (272), Expect = 1e-28
 Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 12/249 (4%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSN 72
           VA+VT +++GIG  +A  L   G  + I+         + V ++ A G   I     +  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLMQD 131
               + L+D+  E +GR+D  V NA +      DLL   E   D+L  IN++    L Q 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 132 AA------PHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
            A      P    G   S++F++SI  Y        Y ++K  L   T+ LA  +A +  
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
            V+ + PG + T    A +          G   + R G   ++A A+  LAS    Y TG
Sbjct: 183 AVHEIRPGLIHTDMT-APVKEKYDELIAAGLVPIRRWGQPEDIAKAVRTLASGLLPYSTG 241

Query: 243 ETLVVAGGM 251
           + + + GG+
Sbjct: 242 QPINIDGGL 250

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  108 bits (271), Expect = 1e-28
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 15/249 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +V +VT +++G+G  +A     EGA VV++  +  + + A       G   I I   V +
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYR--STESAEAVAAEAGERAIAIQADVRD 58

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK-------ESVLDKLWEINVKSS 125
               + +I++    +G +D  V N A+  +  D  + K       E    +L E  VK +
Sbjct: 59  RDQVQAMIEEAKNHFGPVDTIV-NNALIDFPFDPDQRKTFDTIDWEDYQQQL-EGAVKGA 116

Query: 126 ILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
           + L+Q   P  ++  S  V+ I +     P      Y   K ALLG T+ +A E+ P   
Sbjct: 117 LNLLQAVLPDFKERGSGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGI 176

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
            VN V+ G +    A A      V  A+   T L ++ T  ++A A+ F AS  A  +TG
Sbjct: 177 TVNMVSGGLLKVTDASAA-TPKEVFDAIAQTTPLGKVTTPQDIADAVLFFASPWARAVTG 235

Query: 243 ETLVVAGGM 251
           + LVV GG+
Sbjct: 236 QNLVVDGGL 244

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score =  108 bits (272), Expect = 1e-28
 Identities = 77/264 (29%), Positives = 124/264 (46%), Gaps = 25/264 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVI 64
           R +G+V +VT    G+G  + +R   EGA V +       +DK+   L+ L    G  V+
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAV-------LDKSAAGLQELEAAHGDAVV 54

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL----DKLWEI 120
           G+   V +    K  + + V  +G+ID  + NA +  Y+  L+   +  +    D+++ I
Sbjct: 55  GVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHI 114

Query: 121 NVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           NVK  +L ++ A P +     SV+F  S AG+ P     +Y   K A++GL K LA E+A
Sbjct: 115 NVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELA 174

Query: 180 PDTRVNCVAPGFVPTHF--AQAL-LGNDAVRKALEGKTL-----LNRLGTTGNMAAAIAF 231
           P  RVN VAPG + +     ++L + + ++     G  L     + R+        A  F
Sbjct: 175 PYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVF 234

Query: 232 LAS-DDASYITGETLVVAGGMASR 254
            A+  D    TG  L   GGM  R
Sbjct: 235 FATRGDTVPATGAVLNYDGGMGVR 258

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score =  108 bits (271), Expect = 3e-28
 Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 7/247 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIGI 66
           R + + A+VT    GIG   A     EGA V IS    ++++     + ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              +S+E+  ++L+ +  +  G +D+  L A       D+         K + INV +  
Sbjct: 106 PGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALF 165

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            L Q+A P + KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A    RVN
Sbjct: 166 WLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225

Query: 186 CVAPGFVPTHFAQALLGNDAVRK--ALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            VAPG  P   A  + G     K      +T + R G    +A    +LAS ++SY+T E
Sbjct: 226 IVAPG--PIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE 283

Query: 244 TLVVAGG 250
              V GG
Sbjct: 284 VHGVCGG 290

Length = 294

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score =  107 bits (268), Expect = 4e-28
 Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 24/251 (9%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVI--SSRKQKNVDKAVEK----LKALGIEVIGII 67
           +A+VT +    G   AE L  +G +VV   +S       +A E      KAL        
Sbjct: 3   IALVTHARHFAGPASAEALTEDGYTVVCHDASFADAAERQAFESENPGTKAL-------- 54

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
               +EQ  + L+D  ++  G IDV V N  +      +  T E+ + + +E        
Sbjct: 55  ----SEQKPEELVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFEALSIFPFA 110

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L+Q A   M    G S++FI+S    +P +  ++YG  + A + L ++LA E++ D   V
Sbjct: 111 LLQAAIAQMKKAGGGSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILV 170

Query: 185 NCVAPGFV--PTHFAQALL-GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
             + P F   PT+F  +    N  +R+ ++    L RLG    M A +AFLAS  A  IT
Sbjct: 171 YAIGPNFFNSPTYFPTSDWENNPELRERVKRDVPLGRLGRPDEMGALVAFLASRRADPIT 230

Query: 242 GETLVVAGGMA 252
           G+    AGG  
Sbjct: 231 GQFFAFAGGYL 241

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  107 bits (269), Expect = 5e-28
 Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 24/256 (9%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVS 71
            VA+VT   +GIGLG+A  L   G  + I+     + +    ++L+ALG+EVI     V+
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVA 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLMQ 130
           +    + ++D     +GRID  V NA V      DLL       D++  IN++    L Q
Sbjct: 63  DLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQ 122

Query: 131 DAAPHM--QKGS------SVVFISSIAGYQPPSAMAM-----YGVTKTALLGLTKALAAE 177
             A  M  Q         S+VF+SS+      + M       Y ++K  L    +  AA 
Sbjct: 123 AVAKRMLAQPEPEELPHRSIVFVSSVN-----AIMVSPNRGEYCISKAGLSMAAQLFAAR 177

Query: 178 MAPD-TRVNCVAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           +A +   V  V PG + T     +    DA     +G   + R G   ++A A+A LAS 
Sbjct: 178 LAEEGIGVYEVRPGLIKTDMTAPVTAKYDA--LIAKGLVPMPRWGEPEDVARAVAALASG 235

Query: 236 DASYITGETLVVAGGM 251
           D  Y TG+ + V GG+
Sbjct: 236 DLPYSTGQAIHVDGGL 251

Length = 256

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score =  106 bits (266), Expect = 7e-28
 Identities = 77/248 (31%), Positives = 131/248 (52%), Gaps = 17/248 (6%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE----VIGII 67
           G+ A+VT ++ GIG  +A  L  +GA V +   +       VEKL+AL  E    V    
Sbjct: 6   GRKALVTGASGGIGEEIARLLHAQGAIVGLHGTR-------VEKLEALAAELGERVKIFP 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
            ++S+    K L  K       +D+ V NA +       ++  +   D + E+N+ ++  
Sbjct: 59  ANLSDRDEVKALGQKAEADLEGVDILVNNAGITKDGL-FVRMSDEDWDSVLEVNLTATFR 117

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L ++    M  ++   ++ I+S+ G       A Y  +K  ++G +K+LA E+A  +  V
Sbjct: 118 LTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTV 177

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           NCVAPGF+ +     L  ND  ++A+ G   + R+GT   +A+A+A+LAS +A+Y+TG+T
Sbjct: 178 NCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQT 235

Query: 245 LVVAGGMA 252
           + V GGMA
Sbjct: 236 IHVNGGMA 243

Length = 245

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  106 bits (265), Expect = 1e-27
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 10/247 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK A++T ++ GIG  VA      GA V I++R    ++K  +++   G +V+ + C 
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS  Q   +++D+   + G ID+ V NA +      +L        +L   NV    L  
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITVTP-MLDMPLEEFQRLQNTNVTGVFLTA 125

Query: 130 QDAAPHM---QKGSSVVFISSIAGY--QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           Q AA  M    +G  ++  +S++G+    P  ++ Y  +K A++ LTKA+A E+AP   R
Sbjct: 126 QAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIR 185

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN V+PG++ T   +        +   E K  L RLG    +A    +LAS+ +SY+TG 
Sbjct: 186 VNSVSPGYILTELVEPY---TEYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMTGS 242

Query: 244 TLVVAGG 250
            +V+ GG
Sbjct: 243 DIVIDGG 249

Length = 253

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score =  106 bits (266), Expect = 1e-27
 Identities = 53/193 (27%), Positives = 98/193 (50%), Gaps = 5/193 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICH 69
           +GK A++T ++ GIG  +A++L   G ++++ +R++  ++   ++L    G+EV  I   
Sbjct: 5   KGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPAD 64

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S+ +  + L D+  E+ G IDV V NA         L+      +++ ++N+ +   L 
Sbjct: 65  LSDPEALERLEDELKERGGPIDVLVNNAGFG-TFGPFLELSLDEEEEMIQLNILALTRLT 123

Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +   P M +  +  ++ I S AG  P   MA+Y  TK  +L  ++AL  E+     +V  
Sbjct: 124 KAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVTA 183

Query: 187 VAPGFVPTHFAQA 199
           V PG   T F  A
Sbjct: 184 VCPGPTRTEFFDA 196

Length = 265

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  105 bits (263), Expect = 2e-27
 Identities = 71/247 (28%), Positives = 115/247 (46%), Gaps = 8/247 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA-VEKLKALGIEVIGII 67
           +  GKVA+VT   +GIG  +   L  EGA VVI+    K   +  V +L   G +V  + 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS  +    L+++ V  +G++D+ V NA +        K      +++ ++N+ S   
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGIT-RDRTFKKLNREDWERVIDVNLSSVFN 121

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
                 P++   +   ++ ISSI G         Y   K  +LG TK+LA E+A  +  V
Sbjct: 122 TTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTV 181

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N + PGF+ T     +     VR+ +  K    R G    +A  + +L  D A YITG+ 
Sbjct: 182 NAICPGFIDTEMVAEVPEE--VRQKIVAKIPKKRFGQADEIAKGVVYLCRDGA-YITGQQ 238

Query: 245 LVVAGGM 251
           L + GG+
Sbjct: 239 LNINGGL 245

Length = 247

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  105 bits (265), Expect = 2e-27
 Identities = 55/200 (27%), Positives = 103/200 (51%), Gaps = 5/200 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIIC 68
            QGKV ++T ++ GIG  +A  L   GA +V+S+R+++ +++   +   LG      +  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +S+ +  + ++++ ++ +G +D+ + NA ++   +    T   V  K+ E+N    + L
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGIS-MRSLFHDTSIDVDRKIMEVNYFGPVAL 119

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PDTRVN 185
            + A PH+  +   S+V +SSIAG         Y  +K AL G   +L AE++ P+  V 
Sbjct: 120 TKAALPHLIERSQGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNISVT 179

Query: 186 CVAPGFVPTHFAQALLGNDA 205
            V PG + T+ A   L  D 
Sbjct: 180 VVCPGLIDTNIAMNALSGDG 199

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  105 bits (264), Expect = 2e-27
 Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 25/258 (9%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK A++T S +GIG   A+    EGA V I        D  +E  +A   E+    C 
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGARVAI-------ADINLEAARATAAEIGPAACA 53

Query: 70  VSNEQHRKNLIDKTV----EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +S +   +  ID+ V    +++G ID+ V NAA+   A  +  T+ES  D+L+ INV  +
Sbjct: 54  ISLDVTDQASIDRCVAALVDRWGSIDILVNNAALFDLAPIVDITRES-YDRLFAINVSGT 112

Query: 126 ILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-D 181
           + +MQ  A  M    +G  ++ ++S AG +  + + +Y  TK A++ LT++    +    
Sbjct: 113 LFMMQAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHG 172

Query: 182 TRVNCVAPGFVPT-HFAQ--ALLGNDAVRKALEGKTL------LNRLGTTGNMAAAIAFL 232
             VN +APG V   H+    A       R   E K L        R+G   ++     FL
Sbjct: 173 INVNAIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPFGRMGRAEDLTGMAIFL 232

Query: 233 ASDDASYITGETLVVAGG 250
           AS DA YI  +T  V GG
Sbjct: 233 ASTDADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score =  105 bits (263), Expect = 2e-27
 Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 16/194 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD------------KAVEKLKAL 59
           GKVA VT +++GIG  +A RL   GA+VV++++     D            +  E+++A 
Sbjct: 3   GKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIEAA 62

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G + + I+  V +E   + L++ TV+++GR+D+ V NA     +  +  T     D +  
Sbjct: 63  GGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLSL-VEDTPAKRFDLMQR 121

Query: 120 INVKSSILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           +N++ + LL Q A PHM K     ++ IS     +P      Y   K  +  LT  LAAE
Sbjct: 122 VNLRGTYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAE 181

Query: 178 MAP-DTRVNCVAPG 190
           +      VN + P 
Sbjct: 182 LRRHGIAVNSLWPS 195

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  104 bits (262), Expect = 4e-27
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 16/254 (6%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV--EKLKALGIEVIGIICH 69
           GKVA+VT ST GIGLG+A  L   GA++V++        +AV        G++V+     
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKHGVKVLYHGAD 61

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S     ++++     ++G +D+ V NA +  + A +        D +  +N+ +     
Sbjct: 62  LSKPAAIEDMVAYAQRQFGGVDILVNNAGIQ-HVAPIEDFPTEKWDAIIALNLSAVFHTT 120

Query: 130 QDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A PHM+K     ++ I+S+ G    +  + Y   K  ++GLTK +A E A      N 
Sbjct: 121 RLALPHMKKQGWGRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGVTCNA 180

Query: 187 VAPGFVPTHF------AQALLGND----AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           + PG+V T        A A         A R+ L  K    +  T   +     FLASD 
Sbjct: 181 ICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQFVTPEQLGDTAVFLASDA 240

Query: 237 ASYITGETLVVAGG 250
           AS ITG  + V GG
Sbjct: 241 ASQITGTAVSVDGG 254

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score =  103 bits (258), Expect = 9e-27
 Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 10/192 (5%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT +++GIG+ +A  L  +G  V +  R  +     +  L A G +V  +     +
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSLGLRNPE----DLAALSASGGDVEAVPYDARD 56

Query: 73  -EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            E  R  L+D   +++GRIDV V NA +      L +  ++ L+  + INV +   L + 
Sbjct: 57  PEDARA-LVDALRDRFGRIDVLVHNAGIG-RPTTLREGSDAELEAHFSINVIAPAELTRA 114

Query: 132 AAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
             P +++  S  VVF++S++G +  +  A Y  +K AL  L  AL  E      RV+ V 
Sbjct: 115 LLPALREAGSGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRVSAVC 174

Query: 189 PGFVPTHFAQAL 200
           PGFV T  AQ L
Sbjct: 175 PGFVDTPMAQGL 186

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  103 bits (259), Expect = 9e-27
 Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 7/195 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KV ++T  + GIGL +A  L  +G  V+ ++R    ++   E L    +EV+     V++
Sbjct: 1   KVVLITGCSSGIGLALALALAAQGYRVIATARNPDKLESLGE-LLNDNLEVL--ELDVTD 57

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           E+  K  + + +E++GRIDV V NA        L +T    + +L+E+NV   + + +  
Sbjct: 58  EESIKAAVKEVIERFGRIDVLVNNAGYG-LFGPLEETSIEEVRELFEVNVFGPLRVTRAF 116

Query: 133 APHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P M  Q    +V +SS+AG  P   +  Y  +K AL  L+++L  E+AP   +V  + P
Sbjct: 117 LPLMRKQGSGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGIKVTIIEP 176

Query: 190 GFVPTHFAQALLGND 204
           G V T FA    G+ 
Sbjct: 177 GPVRTGFADNAAGSA 191

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  103 bits (259), Expect = 9e-27
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 6/187 (3%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           +GKVA++T ++ GIG   A  L   GA VV+++R+++ ++   +++ A     + +   V
Sbjct: 5   KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDV 62

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           ++    +  I+   E++GRID+ V NA +      L +      D++ + NVK  +   +
Sbjct: 63  TDRAAVEAAIEALPEEFGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTR 121

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
              P M  +K   ++ + SIAG  P    A+YG TK A+   +  L  E+A    RV  +
Sbjct: 122 AVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVI 181

Query: 188 APGFVPT 194
           +PG V T
Sbjct: 182 SPGLVET 188

Length = 246

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  103 bits (259), Expect = 1e-26
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 14/251 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKVA+VT    GIGL +A+RL  EGA+VV++    +  +K  E  +  G   +G+ C V+
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAAVVVADIDPEIAEKVAEAAQ-GGPRALGVQCDVT 59

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E   ++  ++ V ++G +D+ V NA +   +  + +T     ++  +IN+    L+ ++
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGIATSSP-IAETSLEDWNRSMDINLTGHFLVSRE 118

Query: 132 AAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           A   M+    G ++VF +S     P    A Y   K A   L + LA E   D  RVN V
Sbjct: 119 AFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKT--------LLNRLGTTGNMAAAIAFLASDDASY 239
            P  V            A R    G          LL R     ++A A+  +AS+D   
Sbjct: 179 NPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVLPEDVAEAVVAMASEDFGK 238

Query: 240 ITGETLVVAGG 250
            TG  + V GG
Sbjct: 239 TTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  103 bits (259), Expect = 1e-26
 Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 33/263 (12%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
             A  F GK   VT + QGIG  VA      GA V+         D+A    +       
Sbjct: 1   MNAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVI-------GFDQAFLTQEDYPFAT- 52

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK--ESVLDKLWE--- 119
             +  VS+      +  + + + G +DV V N      AA +L+    +S+ D+ W+   
Sbjct: 53  -FVLDVSDAAAVAQVCQRLLAETGPLDVLV-N------AAGILRMGATDSLSDEDWQQTF 104

Query: 120 -INVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
            +N   +  L +   P    Q+  ++V + S A + P   MA YG +K AL  L K +  
Sbjct: 105 AVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGL 164

Query: 177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDA-----VRKALEGKTL---LNRLGTTGNMAA 227
           E+AP   R N V+PG   T   + L  ++      +    E   L   L ++     +A 
Sbjct: 165 ELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIAN 224

Query: 228 AIAFLASDDASYITGETLVVAGG 250
           A+ FLASD AS+IT + +VV GG
Sbjct: 225 AVLFLASDLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  103 bits (258), Expect = 1e-26
 Identities = 73/247 (29%), Positives = 109/247 (44%), Gaps = 12/247 (4%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            +VT + QGIG  VA  L   GA V    R  + + + V  L+  G         V++  
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAVDRNFEQLLELVADLRRYGYPFATYKLDVADSA 60

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
               ++ +   +YG IDV V N A       +    +      + +N      + Q  +P
Sbjct: 61  AVDEVVQRLEREYGPIDVLV-NVAGILRLGAIDSLSDEDWQATFAVNTFGVFNVSQAVSP 119

Query: 135 HM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            M  ++  ++V + S A   P   MA Y  +K AL  LTK L  E+AP   R N V+PG 
Sbjct: 120 RMKRRRSGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVVSPGS 179

Query: 192 VPTHFAQALLGND-AVRKALEGKTLLNRLG-------TTGNMAAAIAFLASDDASYITGE 243
             T   + L  ++   ++ + G     RLG          ++A A+ FLASD AS+IT  
Sbjct: 180 TDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPLGKIAEPSDIANAVLFLASDLASHITMH 239

Query: 244 TLVVAGG 250
            LVV GG
Sbjct: 240 DLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  103 bits (259), Expect = 2e-26
 Identities = 58/195 (29%), Positives = 100/195 (51%), Gaps = 2/195 (1%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKV ++T +++GIG  +A RL   GA +V+++R +  +    ++L   G E + +   VS
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVS 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + +  + LI+  V ++G ID+ V NA +  ++     T  SV +++  +N   ++     
Sbjct: 61  DAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHA 120

Query: 132 AAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
           A PH++     +V +SS+AG       + Y  +K AL G   +L  E+A D   V  V P
Sbjct: 121 ALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCP 180

Query: 190 GFVPTHFAQALLGND 204
           GFV T   +  L  D
Sbjct: 181 GFVATDIRKRALDGD 195

Length = 263

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  103 bits (258), Expect = 2e-26
 Identities = 77/265 (29%), Positives = 123/265 (46%), Gaps = 24/265 (9%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVI-------------SSRKQKNVDKAVEKLK 57
           +GKVA +T + +G G   A RL  EGA ++                  ++++D+    ++
Sbjct: 2   EGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLVE 61

Query: 58  ALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
           ALG +V+     V +    + +++  VE++GR+DV V NA V  Y     +  E   D +
Sbjct: 62  ALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYGR-SWELSEEQWDTV 120

Query: 118 WEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
            +IN+       +   PHM     G S++  SS+AG +    +A Y   K  L+GLTK L
Sbjct: 121 LDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTKTL 180

Query: 175 AAEMAP-DTRVNCVAPGFVPTHF------AQALLGNDAVRKALEGKTLLNRLGTTGNMAA 227
           A E+A    RVN + P  V T         +A L      +A      ++      ++A 
Sbjct: 181 ANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFVPPEDVAD 240

Query: 228 AIAFLASDDASYITGETLVVAGGMA 252
           A+ +LASD++ YITG  L V  G  
Sbjct: 241 AVLWLASDESRYITGHQLPVDAGAL 265

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score =  102 bits (256), Expect = 2e-26
 Identities = 70/249 (28%), Positives = 130/249 (52%), Gaps = 9/249 (3%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT +++GIG  +A+RL  +GA V I    +++  ++ V ++++ G     I  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 69  HVSNEQHRKNL---IDKTVEKYG---RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           ++ +    + L   +D  ++      + D+ + NA + P  A + +T E   D++  +N 
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNA 120

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM-APD 181
           K+   ++Q A   ++  S ++ ISS A          Y +TK A+  +T  LA ++ A  
Sbjct: 121 KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG 180

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
             VN + PGF+ T     LL +  +++     +  NRLG   ++A   AFLAS D+ ++T
Sbjct: 181 ITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT 240

Query: 242 GETLVVAGG 250
           G+ + V+GG
Sbjct: 241 GQLIDVSGG 249

Length = 252

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  101 bits (253), Expect = 5e-26
 Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 13/249 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M   F GK A+VT + +GIG    + L   GA VV  SR Q ++D  V +    GIE + 
Sbjct: 1   MELDFAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECP--GIEPV- 57

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
            +     +   + L        G +D+ V NAAV      L  TKE+  D+ +++NV++ 
Sbjct: 58  CVDLSDWDATEEALG-----SVGPVDLLVNNAAVAILQPFLEVTKEAF-DRSFDVNVRAV 111

Query: 126 ILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-D 181
           I + Q  A  M       S+V +SS A  +  +   +Y  TK AL  LTK +A E+ P  
Sbjct: 112 IHVSQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN V P  V T   +    +    K +  +  L +     ++  AI FL SD +S  T
Sbjct: 172 IRVNSVNPTVVMTDMGRDNWSDPEKAKKMLNRIPLGKFAEVEDVVNAILFLLSDKSSMTT 231

Query: 242 GETLVVAGG 250
           G TL V GG
Sbjct: 232 GSTLPVDGG 240

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  102 bits (255), Expect = 6e-26
 Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 5/254 (1%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI--EV 63
           M   FQ +  +VT    GIG GVA  L   GA+V+I  R    +  A E+++AL     V
Sbjct: 1   MQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAV 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
                 V++E      +D     +GR+   V  A  +     + +       +  ++NV 
Sbjct: 61  RYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVN 120

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
            ++ +++ AA  + +  G S V ISSIA          YGVTK+A+  L K  A E+ P 
Sbjct: 121 GTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPS 180

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN + PG + T     +  +  +       T L R+G   ++A    FL SD AS+I
Sbjct: 181 WVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWI 240

Query: 241 TGETLVVAGGMASR 254
           TG+ + V GG   R
Sbjct: 241 TGQVINVDGGHMLR 254

Length = 276

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  100 bits (251), Expect = 1e-25
 Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 8/248 (3%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + K A+VT    GIG     R   EGA V +    ++  +K    ++A G       C +
Sbjct: 2   KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDI 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           ++       +    +  G +DV V NA  + +     KT+  + ++L  IN+  ++ +  
Sbjct: 62  TDRDSVDTAVAAAEQALGPVDVLVNNAGWDKFG-PFTKTEPPLWERLIAINLTGALHMHH 120

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P M  +    +V I+S A     S  A+Y   K  L+  +K +A E A     VN V
Sbjct: 121 AVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNVV 180

Query: 188 APGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            PG   T     + G     + +R+A      L RLG   ++  AI F +SDDAS+ITG+
Sbjct: 181 CPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITGQ 240

Query: 244 TLVVAGGM 251
            L V+GG+
Sbjct: 241 VLSVSGGL 248

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 80/270 (29%), Positives = 119/270 (44%), Gaps = 32/270 (11%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL--KALGIEV 63
           M  + +G+VAVVT  + GIGL   E L   GASV I  R ++ +  A  +L  K  G  +
Sbjct: 2   MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARL 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW--EIN 121
           +   C V +E            ++G +D+ V NA         + T     D  W  E+ 
Sbjct: 62  LAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAG-----QGRVSTFADTTDDAWRDELE 116

Query: 122 VK-SSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           +K  S++    A   + + S   S+V ++S+   QP   M      +  LL L K+LA E
Sbjct: 117 LKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATE 176

Query: 178 MAPD-TRVNCVAPGFVPT-----HFA---------QALLGNDAVRKALEGKTLLNRLGTT 222
           +AP   RVN +  G V +      +          +A     A +K +     L RLG  
Sbjct: 177 LAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIP----LGRLGRP 232

Query: 223 GNMAAAIAFLASDDASYITGETLVVAGGMA 252
              A A+ FLAS  +SY TG  + V+GG A
Sbjct: 233 DEAARALFFLASPLSSYTTGSHIDVSGGFA 262

Length = 265

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score =  101 bits (253), Expect = 1e-25
 Identities = 76/277 (27%), Positives = 123/277 (44%), Gaps = 50/277 (18%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIE 62
           ++      GK A+VT  T+GIG     RL   GA VV ++R +  ++ + VE + A    
Sbjct: 1   MSFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLPEGVEFVAA---- 56

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNP---YAADLLKTKESVLDKL 117
                  ++  +    +    +E+ G +D+ V     +  P   +AA        + D+ 
Sbjct: 57  ------DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAA--------LTDEE 102

Query: 118 WE----INVKSSILLMQDAA--PHM--QKGSSVVFISSIAGYQP-PSAMAMYGVTKTALL 168
           W+    +N+ +++ L  D A  P M  +    ++ ++SI    P P +   Y   K AL 
Sbjct: 103 WQDELNLNLLAAVRL--DRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALS 160

Query: 169 GLTKALAAEMAPD-TRVNCVAPGFVPTHFAQALL-------------GNDAVRKALEGKT 214
             +K+L+ E+AP   RVN V+PG++ T  A AL                  +  +L G  
Sbjct: 161 TYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSL-GGI 219

Query: 215 LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
            L R      +A  IAFLASD A+ ITG   V+ GG 
Sbjct: 220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGT 256

Length = 260

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  100 bits (250), Expect = 2e-25
 Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 24/257 (9%)

Query: 11  QGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEK------LKALGIE 62
             K+A+VT +++  GIG  V  RL  +G  +  +     +             L    IE
Sbjct: 4   MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIE 63

Query: 63  VIGIICH-----VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
             G+ C      +S       +     E+ G   + + NAA +     L +     LDK 
Sbjct: 64  SYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKH 122

Query: 118 WEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQP-PSAMAMYGVTKTALLGLTKAL 174
           + +NV++++LL    A       G  ++ ++S     P P  +A Y  TK A+   TK+L
Sbjct: 123 YAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELA-YAATKGAIEAFTKSL 181

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A E+A     VN V PG   T +       + ++  L  K    R+G   + A  IAFL 
Sbjct: 182 APELAEKGITVNAVNPGPTDTGWI-----TEELKHHLVPKFPQGRVGEPVDAARLIAFLV 236

Query: 234 SDDASYITGETLVVAGG 250
           S++A +ITG+ +   GG
Sbjct: 237 SEEAKWITGQVIHSEGG 253

Length = 256

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 33/261 (12%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE-----VIGI 66
           GK  ++T +   IG  + + +   G  V+ +     + +   E L++LG E     +  +
Sbjct: 4   GKTILITGAGGLIGSALVKAILEAGGIVIAAD---IDKEALNELLESLGKEFKSKKLSLV 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV-LDKLWE---INV 122
              +++++  +  + K+ EKYG+ID  V  A   P   D  K    V LD   E   +++
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVNCAY--PRNKDYGKKFFDVSLDDFNENLSLHL 118

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPP-------SAMAM---YGVTKTALLGL 170
            SS L  Q  A +   Q G ++V ISSI G   P       ++M     Y   K  ++ L
Sbjct: 119 GSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHL 178

Query: 171 TKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
           TK LA        RVNCV+PG +  +  +A L  +A +K   GK +L+      ++   +
Sbjct: 179 TKYLAKYFKDSNIRVNCVSPGGILDNQPEAFL--NAYKKCCNGKGMLD----PDDICGTL 232

Query: 230 AFLASDDASYITGETLVVAGG 250
            FL SD + YITG+ ++V  G
Sbjct: 233 VFLLSDQSKYITGQNIIVDDG 253

Length = 256

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 99.7 bits (248), Expect = 4e-25
 Identities = 71/251 (28%), Positives = 127/251 (50%), Gaps = 9/251 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
           K   GKVA+VT +++GIG  +A RL  +GA V I   R ++  D+ + ++++ G +   I
Sbjct: 2   KNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLI 61

Query: 67  ICHVSNEQHRKNLIDKTVEKY------GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
              +++    K L+++   +         ID+ V NA +      +  T E + D++  +
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGT-IENTTEEIFDEIMAV 120

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           N+K+   L+Q   P ++    V+ ISS       +    YG++K AL  +T  LA  +  
Sbjct: 121 NIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGE 180

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN + PG+  T     LL +  +R      ++  R+G   ++A A+AFLAS D+ +
Sbjct: 181 RGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSRW 240

Query: 240 ITGETLVVAGG 250
           +TG+ + V+GG
Sbjct: 241 VTGQIIDVSGG 251

Length = 254

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 98.7 bits (246), Expect = 8e-25
 Identities = 73/252 (28%), Positives = 116/252 (46%), Gaps = 11/252 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGII 67
           F+ KV ++T    G+GL  A RL  EGA + +    ++ ++ A   L  +    EV+ I 
Sbjct: 1   FKDKVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIK 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+E   +  +D TVE++GRID F  NA +               DK+  IN++    
Sbjct: 61  ADVSDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTEDFGADEFDKVVSINLRGVFY 120

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            ++     M  Q    +V  +S+ G +     + Y   K  ++GLT+  A E      R+
Sbjct: 121 GLEKVLKVMREQGSGMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRI 180

Query: 185 NCVAPGFVPTHFAQALL---GNDAVRKALEGKTLLN---RLGTTGNMAAAIAFLASDDAS 238
           N +APG + T   +  L   G +   +A E    +N   R G    +AA +AFL SDDA 
Sbjct: 181 NAIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFGEPEEVAAVVAFLLSDDAG 240

Query: 239 YITGETLVVAGG 250
           Y+    + + GG
Sbjct: 241 YVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 97.2 bits (242), Expect = 2e-24
 Identities = 56/189 (29%), Positives = 87/189 (46%), Gaps = 9/189 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           K A+VT +++GIG   A  L  EG  V I +R +  +  A          V+G+   V +
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICARDEARLAAAAA---QELEGVLGLAGDVRD 57

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLMQD 131
           E   +  +D   E +G +D  V NA V      + L  +E  L      N+  +   +  
Sbjct: 58  EADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLD--TNLTGAFYCIHK 115

Query: 132 AAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           AAP + +  G ++V + S+AG       A Y  +K  LLGL++A   ++   + RV  V 
Sbjct: 116 AAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNVM 175

Query: 189 PGFVPTHFA 197
           PG V T FA
Sbjct: 176 PGSVDTGFA 184

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 70/258 (27%), Positives = 119/258 (46%), Gaps = 27/258 (10%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + KV V+T   QG+G  +AE L  +GA + +    Q+ +++AV +  ALG EV G   +V
Sbjct: 4   KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANV 63

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE-------------SVLDKL 117
           ++E+  +    +  E +G+++  + NA +      L+K K+             SV+D  
Sbjct: 64  TDEEDVEATFAQIAEDFGQLNGLINNAGI-LRDGLLVKAKDGKVTSKMSLEQFQSVID-- 120

Query: 118 WEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
             +N+    L  ++AA  M        ++ ISSIA          Y  +K  +  +T   
Sbjct: 121 --VNLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNM-GQTNYSASKAGVAAMTVTW 177

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A E+A    RV  +APG + T    A+       + LE    + RLG    +A  + F+ 
Sbjct: 178 AKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFII 235

Query: 234 SDDASYITGETLVVAGGM 251
            +D  Y+TG  L + GG+
Sbjct: 236 END--YVTGRVLEIDGGL 251

Length = 253

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 97.1 bits (242), Expect = 3e-24
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 39/261 (14%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            KV ++T  + G+G  +A+R   EGA+VVI+ R ++ +++A  +++    +V+ +   V 
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVR 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADL-LKTKESVLD------------ 115
           N +  + ++++  EK+GRID  + NAA N   P A DL +    SV+D            
Sbjct: 61  NPEDVQKMVEQIDEKFGRIDALINNAAGNFICP-AEDLSVNGWNSVIDIVLNGTFYCSQA 119

Query: 116 --KLW-EINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK 172
             K W E  +K +I+ M  A      G  V+           SA A  GV     L +T+
Sbjct: 120 VGKYWIEKGIKGNIINMV-ATYAWDAGPGVI----------HSAAAKAGV-----LAMTR 163

Query: 173 ALAAEMAPD--TRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
            LA E       RVN +APG +  T  A  L  ++   K       L RLGT   +A   
Sbjct: 164 TLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLA 223

Query: 230 AFLASDDASYITGETLVVAGG 250
            FL SD+A+YI G  + + GG
Sbjct: 224 YFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 97.2 bits (242), Expect = 4e-24
 Identities = 73/255 (28%), Positives = 127/255 (49%), Gaps = 21/255 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHV 70
           GK+A  TAS++GIG GVA  L   GA V++ SR ++N+ KA EK+K+   ++V  I+  +
Sbjct: 8   GKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADL 67

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +  +  +  + K ++  G  D+F  +    P     ++      +   ++ +  ++ L +
Sbjct: 68  TKREDLERTV-KELKNIGEPDIFFFSTG-GPKPGYFMEMSMEDWEGAVKLLLYPAVYLTR 125

Query: 131 DAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
              P M++     +++ +S+A  +P   +A+  V + ++ GL + LA E+ P    VN +
Sbjct: 126 ALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNGI 185

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTL------------LNRLGTTGNMAAAIAFLASD 235
            PG + T     L  + A R   EGK++            L RLG    +   +AFLASD
Sbjct: 186 MPGIIRTDRVIQLAQDRAKR---EGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD 242

Query: 236 DASYITGETLVVAGG 250
             SYI G  + V GG
Sbjct: 243 LGSYINGAMIPVDGG 257

Length = 263

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 96.3 bits (240), Expect = 8e-24
 Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 16/253 (6%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           +GK+A++T ++ GIG  +A+     GA++V +   Q+ VDK +   + LGIE  G +C V
Sbjct: 9   KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDV 68

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEINVKSSIL 127
           ++E   + ++ +  ++ G ID+ V NA +    P    +L+       ++ +I++ +  +
Sbjct: 69  TDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRIP----MLEMSAEDFRQVIDIDLNAPFI 124

Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +   P M K     ++ I S+        ++ Y   K  L  LTK +A+E    + + 
Sbjct: 125 VSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQC 184

Query: 185 NCVAPGFVPTHFAQAL--LGNDAVRKALE----GKTLLNRLGTTGNMAAAIAFLASDDAS 238
           N + PG++ T     L  L  D  R   +     KT   R G   ++A    FLASD ++
Sbjct: 185 NGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASN 244

Query: 239 YITGETLVVAGGM 251
           ++ G  L V GG+
Sbjct: 245 FVNGHILYVDGGI 257

Length = 265

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 95.6 bits (238), Expect = 1e-23
 Identities = 70/256 (27%), Positives = 125/256 (48%), Gaps = 10/256 (3%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIE 62
           NM+   +GK  V++  T+GIG  +       G ++  +  S  ++    A +  +  GI+
Sbjct: 1   NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIK 60

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-----ADLLKTKESVLDKL 117
                 ++   +  K L  K  E + R+D F+ NA ++  A        ++ K   L+ +
Sbjct: 61  AKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNI 120

Query: 118 WEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
           +   V + ++  Q+AA  M+K  G S++ +SS          A +G +K A+  + K  A
Sbjct: 121 YTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAA 180

Query: 176 AEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
            E+   + RVN V+ G + T   +A    + V+   E  + LNR+G   ++A A  FL S
Sbjct: 181 TELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCS 240

Query: 235 DDASYITGETLVVAGG 250
           + AS++TG+T+VV GG
Sbjct: 241 EKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 66/244 (27%), Positives = 117/244 (47%), Gaps = 4/244 (1%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            GK  ++T S QGIG  +A  L   GA ++I+    +  + AV KL+  GI+      +V
Sbjct: 8   AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNV 67

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +++Q  +  I+   +  G IDV + NA +        +  E   + +  +N  +  L+ Q
Sbjct: 68  THKQEVEAAIEHIEKDIGPIDVLINNAGIQRRHP-FTEFPEQEWNDVIAVNQTAVFLVSQ 126

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
             A +M  ++   ++ I S+        +  Y  +K A+  LT+ +  E+A  + +VN +
Sbjct: 127 AVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGI 186

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APG+  T   +AL+ ++A    L  +T   R G    +  A  FL+S  + ++ G  L V
Sbjct: 187 APGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGHLLFV 246

Query: 248 AGGM 251
            GGM
Sbjct: 247 DGGM 250

Length = 254

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 93.7 bits (233), Expect = 7e-23
 Identities = 71/261 (27%), Positives = 116/261 (44%), Gaps = 26/261 (9%)

Query: 8   KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEK-------- 55
            + + KVAVVT  +   GIG  + + L   GA +  +  +   K +   V++        
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 56  -LKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA--VNPYAADLLKTKES 112
            L   G++V  +   ++     K L++K  E+ G   + V NAA   N    D       
Sbjct: 62  ELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTN---NDFSNLTAE 118

Query: 113 VLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGL 170
            LDK + +NV+++ LL    A    K  G  ++ ++S     P      Y  TK A+  L
Sbjct: 119 ELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDAL 178

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
           T +LAAE+A     VN + PG   T +       + +++ L       R+G   + A  I
Sbjct: 179 TSSLAAEVAHLGITVNAINPGPTDTGWM-----TEEIKQGLLPMFPFGRIGEPKDAARLI 233

Query: 230 AFLASDDASYITGETLVVAGG 250
            FLAS++A +ITG+ +   GG
Sbjct: 234 KFLASEEAEWITGQIIHSEGG 254

Length = 256

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 93.9 bits (234), Expect = 8e-23
 Identities = 62/206 (30%), Positives = 102/206 (49%), Gaps = 18/206 (8%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K F GKVAV+T +  G GL  A      G  +V++  +Q  +D+AV +L+A G EV+G+ 
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVR 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK---- 123
             VS+    + L D  +E++G + +   NA V    A  L  + S+ D  W + V     
Sbjct: 62  TDVSDAAQVEALADAALERFGAVHLLFNNAGV---GAGGLVWENSLADWEWVLGVNLWGV 118

Query: 124 -------SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
                  + ++L         +G  +V  +S+AG   P AM +Y V+K A++ LT+ L  
Sbjct: 119 IHGVRAFTPLMLAAAEKDPAYEG-HIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQ 177

Query: 177 EMA-PDTRVNC--VAPGFVPTHFAQA 199
           +++    +V    + P FVPT   Q+
Sbjct: 178 DLSLVTDQVGASVLCPYFVPTGIWQS 203

Length = 287

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 92.9 bits (231), Expect = 1e-22
 Identities = 79/252 (31%), Positives = 118/252 (46%), Gaps = 29/252 (11%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            +VT + QGIG  VA  L   GA+V+        +D     L   G  +      V++  
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVI-------ALDLPFVLLLEYGDPLRLTPLDVADAA 53

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWE----INVKSSILLM 129
             + +  + + ++G ID  V  A V  P A D L T++      WE    +NV     L+
Sbjct: 54  AVREVCSRLLAEHGPIDALVNCAGVLRPGATDPLSTED------WEQTFAVNVTGVFNLL 107

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           Q  APHM  ++  ++V ++S A + P  +MA YG +K AL  L+K L  E+AP   R N 
Sbjct: 108 QAVAPHMKDRRTGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCNV 167

Query: 187 VAPGFVPTHFAQALL-GNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASDDAS 238
           V+PG   T   + L    D   + + G          L ++    ++A A+ FLASD A 
Sbjct: 168 VSPGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPLGKIAQPADIANAVLFLASDQAG 227

Query: 239 YITGETLVVAGG 250
           +IT   LVV GG
Sbjct: 228 HITMHDLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 93.0 bits (232), Expect = 1e-22
 Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 12/249 (4%)

Query: 12  GKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           GK  ++T  A+ + I  G+A+ L   GA +  + + +    +  +  + LG   + + C 
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLGESALVLPCD 60

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINVKSSI 126
           VSN++  K L  +  + +G++D  V + A  P        L T      K  +I+  S +
Sbjct: 61  VSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPKVQLKGPFLDTSRKGFLKALDISAYSLV 120

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEMAPD-T 182
            L + A P M  G S+V +S +   +    +  Y   GV K AL    + LA E+     
Sbjct: 121 SLAKAALPIMNPGGSIVTLSYLGSER---VVPGYNVMGVAKAALESSVRYLAYELGRKGI 177

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN ++ G + T  A  + G D + +  E +  L R  T   +    AFL SD +S ITG
Sbjct: 178 RVNAISAGPIKTLAASGITGFDKMLEYSEQRAPLGRNVTAEEVGNTAAFLLSDLSSGITG 237

Query: 243 ETLVVAGGM 251
           E + V GG 
Sbjct: 238 EIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 92.2 bits (229), Expect = 2e-22
 Identities = 56/217 (25%), Positives = 104/217 (47%), Gaps = 11/217 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGII 67
           R++G+VA+VT ++ GIG  VA  L   G  VV  +R+   ++    + ++ G   +    
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C +SNE+   ++      ++  +DV + NA +      LL  K     +++++NV +  +
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGL-ARPEPLLSGKTEGWKEMFDVNVLALSI 121

Query: 128 LMQDAAPHMQK----GSSVVFISSIAG--YQPPSAMAMYGVTKTALLGLTKALAAEM--- 178
             ++A   M++       ++ I+S++G    P S    Y  TK A+  LT+ L  E+   
Sbjct: 122 CTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELREA 181

Query: 179 APDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL 215
               R   ++PG V T FA  L  ND  + A   +++
Sbjct: 182 KTHIRATSISPGLVETEFAFKLHDNDPEKAAATYESI 218

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 65/259 (25%), Positives = 110/259 (42%), Gaps = 29/259 (11%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---------SSRKQKNVDKAVEKLKAL 59
           RF G+V +VT +  G+G   A      GA VV+         S +     DK V+++KA 
Sbjct: 2   RFDGRVVLVTGAGGGLGRAYALAFAERGAKVVVNDLGGDRKGSGKSSSAADKVVDEIKAA 61

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G + +     V + +    ++   ++ +GR+D+ V NA +    +   K  E   D +  
Sbjct: 62  GGKAVANYDSVEDGE---KIVKTAIDAFGRVDILVNNAGILRDRS-FAKMSEEDWDLVMR 117

Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           +++K S  + + A P+M  QK   ++  SS AG       A Y   K  LLGL+  LA E
Sbjct: 118 VHLKGSFKVTRAAWPYMRKQKFGRIINTSSAAGLYGNFGQANYSAAKLGLLGLSNTLAIE 177

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            A  +   N +AP       A + +    +      + L + L     +A  + +L  + 
Sbjct: 178 GAKYNITCNTIAPA------AGSRMTETVMP-----EDLFDALKPE-YVAPLVLYLCHES 225

Query: 237 ASYITGETLVVAGGMASRL 255
              +TG    V  G   +L
Sbjct: 226 -CEVTGGLFEVGAGWIGKL 243

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score = 91.3 bits (227), Expect = 4e-22
 Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 22/253 (8%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV--EKLKALGIEVIGIICH-VS 71
           A +T +  G+G  +A R+  +GA V ++         A   E   A G  V       V+
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVT 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSIL 127
           +E   + L+ +  +  G + V V NA V           E +    W     INV+S  L
Sbjct: 62  DEAQWQALLAQAADAMGGLSVLVNNAGVGS-----FGAIEQIELDEWRRVMAINVESIFL 116

Query: 128 LMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA---AEMAPDT 182
             + A P+++    +S+V ISS+A ++       Y  +K A+  LTK++A   A    D 
Sbjct: 117 GCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV 176

Query: 183 RVNCVAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           R N + P F+ T       Q L   +A RK L     L RLG   ++A A+ +LASD++ 
Sbjct: 177 RCNSIHPTFIRTGIVDPIFQRLGEEEATRK-LARGVPLGRLGEPDDVAHAVLYLASDESR 235

Query: 239 YITGETLVVAGGM 251
           ++TG  LV+ GG+
Sbjct: 236 FVTGAELVIDGGI 248

Length = 251

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 88.8 bits (221), Expect = 5e-22
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 6/170 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKN--VDKAVEKLKALGIEVIGIICH 69
              ++T  T G+GL +A  L  EGA  +V+ SR+       + V +L+ALG EV    C 
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEVTVAACD 60

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++      L+       G +D  V NA V      L +      +++    V  +  L 
Sbjct: 61  VADRDALAALLAALPAALGPLDGVVHNAGVLD-DGPLEELTPERFERVLAPKVTGAWNLH 119

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           +          + V  SS+AG       A Y     AL  L +   AE  
Sbjct: 120 ELTRD--LDLGAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEGL 167

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 91.0 bits (226), Expect = 5e-22
 Identities = 75/246 (30%), Positives = 115/246 (46%), Gaps = 9/246 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           KV ++T +++GIG   A      G SV I+ +R     ++  + ++A G     +   V+
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           NE     + D     +GR+D  V NA +   +  L     + L ++++ NV  + L  ++
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCARE 122

Query: 132 AAPHMQK-----GSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           AA  +       G ++V +SSIA     P+    Y  +K A+  LT  LA E+ P   RV
Sbjct: 123 AARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVRV 182

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N V PG + T    A  G       L  +T L R G    +A  I +L SD ASY+TG  
Sbjct: 183 NAVRPGLIETEI-HASGGQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL 241

Query: 245 LVVAGG 250
           L V GG
Sbjct: 242 LDVGGG 247

Length = 248

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 90.8 bits (226), Expect = 9e-22
 Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 8/189 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +GKV  +T   +GIGL  A  L   GA V I      +   A E    LG+ V+G   
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGARVAIGDL---DEALAKETAAELGL-VVGGPL 57

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++       +D      G IDV V NA V P     L   ++V  ++ ++NV   IL 
Sbjct: 58  DVTDPASFAAFLDAVEADLGPIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILG 116

Query: 129 MQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + AAP M       VV ++S+AG  P   MA Y  +K A++G T A   E+      V+
Sbjct: 117 SKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVS 176

Query: 186 CVAPGFVPT 194
            V P FV T
Sbjct: 177 VVLPSFVNT 185

Length = 273

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 89.8 bits (223), Expect = 1e-21
 Identities = 68/243 (27%), Positives = 115/243 (47%), Gaps = 14/243 (5%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F GK  +V   ++GIG  +  R   +GA+V  +    K  D A    +  G   +     
Sbjct: 4   FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSK--DAAERLAQETGATAV----- 56

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            ++   R  +ID  V K G +D+ V+NA +     D L+     +D+L++IN+ +     
Sbjct: 57  QTDSADRDAVID-VVRKSGALDILVVNAGI-AVFGDALELDADDIDRLFKINIHAPYHAS 114

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-DTRVNCV 187
            +AA  M +G  ++ I S+ G + P A MA Y  +K+AL G+ + LA +  P    +N V
Sbjct: 115 VEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVV 174

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
            PG + T    A   N  ++  +     + R G    +A  +A+LA  +AS++TG    +
Sbjct: 175 QPGPIDTDANPA---NGPMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTI 231

Query: 248 AGG 250
            G 
Sbjct: 232 DGA 234

Length = 237

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 89.4 bits (222), Expect = 2e-21
 Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 20/243 (8%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +  +VT +T+GIGL ++ RL   G  V+  +R    +D    +L A         C +++
Sbjct: 4   RTVLVTGATKGIGLALSLRLANLGHQVIGIARSA--IDDFPGELFA---------CDLAD 52

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +     + +  E +  +D  V N  +      L K   + L  ++++NV++++ + Q  
Sbjct: 53  IEQTAATLAQINEIHP-VDAIVNNVGIALPQP-LGKIDLAALQDVYDLNVRAAVQVTQAF 110

Query: 133 APHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
              M+      +V I S A +      + Y   K+AL+G T+  A E+A     VN VAP
Sbjct: 111 LEGMKLREQGRIVNICSRAIFGALDRTS-YSAAKSALVGCTRTWALELAEYGITVNAVAP 169

Query: 190 GFVPTH-FAQAL-LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           G + T  F Q   +G++  ++ L     + RLGT   +AAAIAFL SDDA +ITG+ L V
Sbjct: 170 GPIETELFRQTRPVGSEEEKRVLA-SIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLGV 228

Query: 248 AGG 250
            GG
Sbjct: 229 DGG 231

Length = 234

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 88.8 bits (221), Expect = 3e-21
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 9/188 (4%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           + ++T    GIG  +A      GA VVI    +K  ++    ++  G +V    C VS  
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKR 60

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
           +       K  ++ G + + + NA V      LL+  +  ++K +E+N  +     +   
Sbjct: 61  EEVYEAAKKIKKEVGDVTILINNAGV-VSGKKLLELPDEEIEKTFEVNTLAHFWTTKAFL 119

Query: 134 PHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM----APDTRVNC 186
           P M     G  +V I+S+AG   P+ +A Y  +K A +G  ++L  E+     P  +   
Sbjct: 120 PDMLERNHG-HIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTL 178

Query: 187 VAPGFVPT 194
           V P F+ T
Sbjct: 179 VCPYFINT 186

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 88.5 bits (220), Expect = 4e-21
 Identities = 64/254 (25%), Positives = 109/254 (42%), Gaps = 23/254 (9%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G VAVVT    G+GL   ERL  +GA VVI        +   E +  LG     +   V+
Sbjct: 2   GLVAVVTGGASGLGLATVERLLAQGAKVVILDL----PNSPGETVAKLGDNCRFVPVDVT 57

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV-----LDKLWEINVKSSI 126
           +E+  K  +     K+GR+D+ V  A +   A    K  +         ++  +N+  + 
Sbjct: 58  SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLELFQRVINVNLIGTF 117

Query: 127 LLMQDAAPHMQKGSS--------VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
            +++ AA  M K           ++  +S+A ++     A Y  +K  ++G+T  +A ++
Sbjct: 118 NVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIARDL 177

Query: 179 APD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLGTTGNMAAAIAFLASDD 236
           AP   RV  +APG   T     L   + VR  L  +    +RLG     A  +  +  + 
Sbjct: 178 APQGIRVVTIAPGLFDTPLLAGL--PEKVRDFLAKQVPFPSRLGDPAEYAHLVQHIIEN- 234

Query: 237 ASYITGETLVVAGG 250
             Y+ GE + + G 
Sbjct: 235 -PYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 88.7 bits (220), Expect = 4e-21
 Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 9/246 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNV-DKAVEKLKALGIEVIGIICHVS 71
           KV ++T +++GIG   A      G +V ++  + ++  +  V+ ++  G E + +   V+
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVA 62

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E     L +    + GR+D  V NA +      L +   + L +++  NV  S L  ++
Sbjct: 63  DEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCARE 122

Query: 132 AAPHMQ-----KGSSVVFISSIAGYQ-PPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           A   M      +G ++V +SS+A     P     Y  +K A+  +T  LA E+A +  RV
Sbjct: 123 AVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEGIRV 182

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N V PG + T    A  G       ++    + R GT   +A AI +L SD+ASY TG  
Sbjct: 183 NAVRPGVIYTEI-HASGGEPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGTF 241

Query: 245 LVVAGG 250
           + V+GG
Sbjct: 242 IDVSGG 247

Length = 248

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 87.4 bits (217), Expect = 1e-20
 Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M     GK  ++T +++GIG   AE    EG  + + +R    ++     L+A     + 
Sbjct: 1   MDLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAH--GVD 58

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +  H   +       ++   + G ID+ V NA   P    L    ++     WE+ V   
Sbjct: 59  VAVHAL-DLSSPEAREQLAAEAGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGY 116

Query: 126 ILLMQDAAPHMQKGSSVVFISSI-AGYQPPSAMAMYGVT-KTALLGLTKALAAEMAPD-T 182
           I L + A P M+   S V ++ I A  + P A  + G     AL+  T+AL  +   D  
Sbjct: 117 IDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGV 176

Query: 183 RVNCVAPGFVPTH--------FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
           RV  V PG V T          A+A LG+++  + L     L R  T   +A  +AFLAS
Sbjct: 177 RVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS 236

Query: 235 DDASYITGETLVVAGGMASR 254
             + Y +G  + V GG+++R
Sbjct: 237 PRSGYTSGTVVTVDGGISAR 256

Length = 259

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 87.1 bits (216), Expect = 2e-20
 Identities = 72/248 (29%), Positives = 113/248 (45%), Gaps = 12/248 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +  +VT  ++G+G  +A     EGA VV++  + +  D A      LG   I +   V++
Sbjct: 6   QTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE--DAAEALADELGDRAIALQADVTD 63

Query: 73  EQHRKNLIDKTVEKYGR-IDVFVLNAAVN-PYAADLLKTKESV----LDKLWEINVKSSI 126
            +  + +     E +G+ I   V NA  +  +  D  K  + +      +  E +VK ++
Sbjct: 64  REQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGAL 123

Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
             +Q A P M  Q    ++ I +     P      Y   K ALLGLT+ LAAE+ P    
Sbjct: 124 NTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGIT 183

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN V+ G + T  A A    D V   +   T L ++ T    A A+ F AS  A  +TG+
Sbjct: 184 VNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWARAVTGQ 242

Query: 244 TLVVAGGM 251
            LVV GG+
Sbjct: 243 NLVVDGGL 250

Length = 253

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 86.5 bits (214), Expect = 2e-20
 Identities = 64/241 (26%), Positives = 114/241 (47%), Gaps = 9/241 (3%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           +VT +++GIG  +A RL  +G  + +     + + +  V  ++A G     +   V++  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
             + L++  + ++G     VLNA +   AA      E   D +   N+     ++     
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGITRDAA-FPALSEEDWDIVIHTNLDGFYNVIHPCTM 120

Query: 135 HM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG 190
            M   ++G  ++ ++S++G         Y   K  L+G TKALA E+A     VNC+APG
Sbjct: 121 PMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPG 180

Query: 191 FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
            + T     +     + +AL+    +NR+G    +A+   FL SD ASY+T + + V GG
Sbjct: 181 LIDTEMLAEV--EHDLDEALK-TVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNGG 237

Query: 251 M 251
           M
Sbjct: 238 M 238

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 86.2 bits (214), Expect = 4e-20
 Identities = 59/255 (23%), Positives = 107/255 (41%), Gaps = 17/255 (6%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV--IGIICH 69
            +VAVV    Q +G  +   L  EG  V ++    +      +++ A   E    G    
Sbjct: 2   NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGAD 61

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            ++EQ    L     E +GR+D+ V NA +   AA +   +    D+  ++N+    L  
Sbjct: 62  ATSEQSVLALSRGVDEIFGRVDLLVYNAGI-AKAAFITDFQLGDFDRSLQVNLVGYFLCA 120

Query: 130 QDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++ +  M +      ++ I+S +G       + Y   K   +GLT++LA ++A     V+
Sbjct: 121 REFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVH 180

Query: 186 CVAPG----------FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            +  G           +P +  +  +  D V +    K  L R     ++   + F AS 
Sbjct: 181 SLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 240

Query: 236 DASYITGETLVVAGG 250
            ASY TG+++ V GG
Sbjct: 241 KASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score = 85.7 bits (212), Expect = 5e-20
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 6/203 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           QGKVA+VT ++ GIG   A  L  EGA+V I++R+   ++   ++L+A G + + +   V
Sbjct: 2   QGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAEGGKALVLELDV 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           ++EQ     +++TVE  GR+D+ V NA +      +     +   ++ + N+   +    
Sbjct: 62  TDEQQVDAAVERTVEALGRLDILVNNAGIMLLGP-VEDADTTDWTRMIDTNLLGLMYTTH 120

Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
            A PH   +   ++V ISS+AG       A+Y  TK  +   ++ L  E+     RV  +
Sbjct: 121 AALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGVRVVVI 180

Query: 188 APGFVPTHFAQALLGNDAVRKAL 210
            PG V T     +     + K  
Sbjct: 181 EPGTVDTELRDHI--THTITKEA 201

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 85.1 bits (211), Expect = 6e-20
 Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 4/195 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           MA+  QGK A++T + +GIG  VA  L  EG +V + +R ++N+    E+++A G++V+ 
Sbjct: 1   MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVI 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
               VS+ +     I++   + G ID+ + NA ++ +   L        +K+ ++N+   
Sbjct: 61  ATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAE-WEKIIQVNLMGV 119

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
               +   P M  ++   ++ ISS AG +  +  + Y  +K  +LGLT++L  E+   + 
Sbjct: 120 YYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNI 179

Query: 183 RVNCVAPGFVPTHFA 197
           RV  + P  V T  A
Sbjct: 180 RVTALTPSTVATDMA 194

Length = 239

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 85.0 bits (211), Expect = 8e-20
 Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 16/193 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHV 70
           G  AVVT +T GIG   AE L   G +V++ SR Q+ +D   +++ +  G+E   I    
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKLDAVAKEIEEKYGVETKTIAADF 60

Query: 71  SN-----EQHRKNLIDKTVEKYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKS 124
           S      E+  K L  + ++    I + V N  ++       L+T E  L  +  +NV +
Sbjct: 61  SAGDDIYERIEKEL--EGLD----IGILVNNVGISHSIPEYFLETPEDELQDIINVNVMA 114

Query: 125 SILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           ++ + +   P M K     +V ISS AG  P   +A Y  +K  L   ++AL  E     
Sbjct: 115 TLKMTRLILPGMVKRKKGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 183 -RVNCVAPGFVPT 194
             V  + P  V T
Sbjct: 175 IDVQSLLPYLVAT 187

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 85.3 bits (212), Expect = 1e-19
 Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 39/258 (15%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-------SRKQKNVDKAVEKLKALGIE 62
             GK   +T +++GIGL +A R   +GA++VI+        +    +  A E+++A G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQ 63

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL---DKLWE 119
            + ++  V +E      + K VE++G ID+ V NA+    A +L  T+++ +   D + +
Sbjct: 64  ALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNAS----AINLTGTEDTPMKRFDLMQQ 119

Query: 120 INVKSSILLMQDAAPHMQKGSS---------VVFISSIAGYQPPSAMAMYGVTKTALLGL 170
           INV+ + L+ Q   PH++K  +         +              MA YG++   L   
Sbjct: 120 INVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTL--- 176

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMA-AA 228
              LA E   D   VN + P        +  +   AVR  L G   + R  T   MA AA
Sbjct: 177 --GLAEEFRDDGIAVNALWP--------RTTIATAAVRNLLGGDEAMRRSRTPEIMADAA 226

Query: 229 IAFLASDDASYITGETLV 246
              L+     + TG  L+
Sbjct: 227 YEILSRPAREF-TGNFLI 243

Length = 273

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 87.6 bits (217), Expect = 1e-19
 Identities = 72/264 (27%), Positives = 109/264 (41%), Gaps = 21/264 (7%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIE-VIG 65
           K    +VA VT    GIG   A RL  EGA VV++    +  +  A E     G    + 
Sbjct: 410 KTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVA 469

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V++EQ  K         YG +D+ V NA +   ++   +T         +I     
Sbjct: 470 LKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIA-TSSPFEETTLQEWQLNLDILATGY 528

Query: 126 ILLMQDAAPHMQK---GSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
            L+ ++A   M++   G ++VFI+S    Y   +A A Y   K A   L + LAAE    
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASA-YSAAKAAEAHLARCLAAEGGTY 587

Query: 181 DTRVNCVAP------------GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAA 228
             RVN V P             +     A   +  D + +    +TLL R     ++A A
Sbjct: 588 GIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEA 647

Query: 229 IAFLASDDASYITGETLVVAGGMA 252
           + FLAS  +   TG  + V GG+ 
Sbjct: 648 VFFLASSKSEKTTGCIITVDGGVP 671

Length = 676

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 83.2 bits (206), Expect = 3e-19
 Identities = 71/243 (29%), Positives = 111/243 (45%), Gaps = 21/243 (8%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           +V   + GIGL +A     EGA V I+SR +  +  A   L   G  V      +++E  
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAA 59

Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAA----DLLKTKESVLDKLWEINVKSSILLMQD 131
               +D    + G  D  V+ AA  P        L   + ++  K W      +  + + 
Sbjct: 60  ----VDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFW-----GAYRVAR- 109

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
            A  +  G S+ F+S  A  +P ++  + G    AL  L + LA E+AP  RVN V+PG 
Sbjct: 110 -AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP-VRVNTVSPGL 167

Query: 192 VPTHFAQALLGN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG 249
           V T     L G+  +A+  A   +    R+G   ++A AI FLA++   + TG T++V G
Sbjct: 168 VDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDG 225

Query: 250 GMA 252
           G A
Sbjct: 226 GHA 228

Length = 230

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 83.3 bits (206), Expect = 4e-19
 Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 18/253 (7%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGII 67
              G+VA VT +  GIG  +A  L   GA V +   +  + + +  E ++A G   I I 
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIA 64

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+++   +  + +T  + G + + V NAA    A    + +E     + +IN+    L
Sbjct: 65  ADVTSKADLRAAVARTEAELGALTLAV-NAAGIANANPAEEMEEEQWQTVMDINLTGVFL 123

Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAEMAPD-T 182
             Q  A  M +  G S+V I+S++G      +  A Y  +K  ++ L+K+LA E      
Sbjct: 124 SCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGI 183

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVR-----KALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           RVN ++PG+  T        N         K  E +T + R+     M     FL SD A
Sbjct: 184 RVNSISPGYTATPM------NTRPEMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAA 237

Query: 238 SYITGETLVVAGG 250
           S+ TG  L+V GG
Sbjct: 238 SFCTGVDLLVDGG 250

Length = 254

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 83.1 bits (205), Expect = 6e-19
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 19/252 (7%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F G+ AV+T    GIGL         GA VV+    +  + +AV  L+A G +V G++C 
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCD 63

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK--SSIL 127
           V + +   +L D+     G +DV   NA +      +++      D  W I+V    SI 
Sbjct: 64  VRHREEVTHLADEAFRLLGHVDVVFSNAGI-VVGGPIVEMTHD--DWRWVIDVDLWGSIH 120

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            ++   P +     G  VVF +S AG  P + +  YGV K  ++GL + LA E+  D   
Sbjct: 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           V+ + P  V T+       ++ +R A   ++  +  G+ G +      L  DD + +T +
Sbjct: 181 VSVLCPMVVETNLVA---NSERIRGAACAQS--STTGSPGPLPLQDDNLGVDDIAQLTAD 235

Query: 244 TLVVAGGMASRL 255
            +     +A+RL
Sbjct: 236 AI-----LANRL 242

Length = 275

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 82.5 bits (204), Expect = 8e-19
 Identities = 78/253 (30%), Positives = 123/253 (48%), Gaps = 20/253 (7%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           +VTAS++GIG  VA  L  +GA VVISSR ++N++KA+++LK  G EV  +   +S++  
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDD 62

Query: 76  RKNLIDKTVEKYGRIDVFVLNAA---VNP---YAADLLKTKESVLDKLWEINVKSSILLM 129
            KNL+ +  E  G ID  V NA      P   + A      E+ L  L      ++ LL+
Sbjct: 63  LKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTT-LLI 121

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA-AEMAPDTRVNCVA 188
           Q       KG  +V++SS++  +P   + +  VT+  L+ L K ++        R   V 
Sbjct: 122 QAWLEKKMKG-VLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVL 180

Query: 189 PGFVPTHFAQALLG----------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
            G   T  A+  L            +   + +  +T L R G    + + IAFL S++A 
Sbjct: 181 LGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAE 240

Query: 239 YITGETLVVAGGM 251
           Y+ G T+V  G M
Sbjct: 241 YMLGSTIVFDGAM 253

Length = 259

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.7 bits (202), Expect = 1e-18
 Identities = 64/250 (25%), Positives = 113/250 (45%), Gaps = 25/250 (10%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R +GK   +   ++G+G  VA     EGA V I+SR +  + +  + L   G  +  ++ 
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYG-NIHYVVG 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV--LDKLWEINVKSSI 126
            VS+ +  +N+I+K  +    ID  V+   V  Y  D   T E    L+++   ++K  +
Sbjct: 61  DVSSTESARNVIEKAAKVLNAIDGLVV--TVGGYVED---TVEEFSGLEEMLTNHIKIPL 115

Query: 127 LLMQDAAPHMQKGSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAE-MAPDTRV 184
             +  +   +++GSS+V +SS++G Y+       Y V K  L    + LA+E +    RV
Sbjct: 116 YAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRV 175

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTG----NMAAAIAFLASDDASYI 240
           N +AP  +   F                   L +LG       + A  I +L +D+A ++
Sbjct: 176 NGIAPTTISGDFEPE-----------RNWKKLRKLGDDMAPPEDFAKVIIWLLTDEADWV 224

Query: 241 TGETLVVAGG 250
            G  + V GG
Sbjct: 225 DGVVIPVDGG 234

Length = 238

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 81.0 bits (200), Expect = 3e-18
 Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 15/249 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            +A+VT  ++GIG   A  L  EG +V ++  +      + V  +   G +   +   +S
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E     +     +    +   V NA +      +       ++++   NV    L  ++
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCRE 121

Query: 132 AAPHMQ-----KGSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           A   M       G ++V +SS A     P     Y  +K A+  LT  L+ E+A    RV
Sbjct: 122 AVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIRV 181

Query: 185 NCVAPGFVPT--HFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
           NCV PGF+ T  H +    G  D V+  +     + R G    +A AI +L SD ASY+T
Sbjct: 182 NCVRPGFIYTEMHASGGEPGRVDRVKSNIP----MQRGGQPEEVAQAIVWLLSDKASYVT 237

Query: 242 GETLVVAGG 250
           G  + +AGG
Sbjct: 238 GSFIDLAGG 246

Length = 247

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 6/190 (3%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           V V+T ++ GIG   A      GA VV+++R  + + +   +++ LG E I ++  V++ 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVRELGGEAIAVVADVADA 61

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
              +   D  VE++GRID +V NA V  +             +++++N    +     A 
Sbjct: 62  AQVERAADTAVERFGRIDTWVNNAGVAVFGR-FEDVTPEEFRRVFDVNYLGHVYGTLAAL 120

Query: 134 PHMQKGSSVVFI--SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR---VNCVA 188
           PH+++      I   S+ GY+     A Y  +K A+ G T++L AE+A D     V  V 
Sbjct: 121 PHLRRRGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGAPISVTLVQ 180

Query: 189 PGFVPTHFAQ 198
           P  + T F  
Sbjct: 181 PTAMNTPFFG 190

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 80.4 bits (199), Expect = 3e-18
 Identities = 48/185 (25%), Positives = 82/185 (44%), Gaps = 4/185 (2%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
             A++T ++ GIG   A      G  + + +R Q  ++    +L++ G++       +SN
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSN 66

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +     I + +E++G  DV + NA +  Y   LL+   S    + ++N+ S        
Sbjct: 67  PEAIAPGIAELLEQFGCPDVLINNAGM-AYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAV 125

Query: 133 APHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE-MAPDTRVNCVAP 189
            P M  + G  ++ +SSIA          Y V+K AL   TK LA E  +   RV  +  
Sbjct: 126 LPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITL 185

Query: 190 GFVPT 194
           G V T
Sbjct: 186 GAVNT 190

Length = 241

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 79.8 bits (197), Expect = 1e-17
 Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 23/254 (9%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV-EKLKALGIEVIGIICHV 70
           GK+A+VT +++GIG G+A +LG  GA+V I+ R          E+++A G + I + C  
Sbjct: 3   GKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQLPGTAEEIEARGGKCIPVRCDH 62

Query: 71  SNEQHRKNLIDKT-VEKYGRIDVFVLNA------AVNPYAADLLKTKESVLDKLWEINVK 123
           S++   + L ++   E+ GR+D+ V NA       +   A    +   ++ D +  + ++
Sbjct: 63  SDDDEVEALFERVAREQQGRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDINNVGLR 122

Query: 124 SSILLMQDAAPHMQKGSS--VVFISSIAG----YQPPSAMAMYGVTKTALLGLTKALAAE 177
           +       AAP M K     +V ISS  G    +        YGV K A+  +   +A E
Sbjct: 123 AHYACSVYAAPLMVKAGKGLIVIISSTGGLEYLFNVA-----YGVGKAAIDRMAADMAHE 177

Query: 178 MAPDTRVNCVA--PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           + P   V  V+  PGFV T     +  +D      + +       TT      +  LA+D
Sbjct: 178 LKPHG-VAVVSLWPGFVRTELVLEMPEDDEGSWHAKERDAFLNGETTEYSGRCVVALAAD 236

Query: 236 -DASYITGETLVVA 248
            D   ++G  L+  
Sbjct: 237 PDLMELSGRVLITG 250

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 81.0 bits (201), Expect = 2e-17
 Identities = 73/264 (27%), Positives = 120/264 (45%), Gaps = 39/264 (14%)

Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
            +  +   GKVA+VT + +GIG  +AE L  +GA VV       +V  A E L A+   V
Sbjct: 202 ADWDRPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCL-----DVPAAGEALAAVANRV 256

Query: 64  IG--IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL----DKL 117
            G  +   ++       + +   E++G +D+ V NA +         T++  L    +  
Sbjct: 257 GGTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGI---------TRDKTLANMDEAR 307

Query: 118 WE--INVK-SSILLMQDA---APHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT 171
           W+  + V   + L + +A   A  +  G  +V +SSI+G         Y  +K  ++GL 
Sbjct: 308 WDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLV 367

Query: 172 KALAAEMAP-DTRVNCVAPGFVPTHFAQA--LLGNDAVRKALEGKTLLNRLGTTG---NM 225
           +ALA  +A     +N VAPGF+ T    A      +A R+       +N L   G   ++
Sbjct: 368 QALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRR-------MNSLQQGGLPVDV 420

Query: 226 AAAIAFLASDDASYITGETLVVAG 249
           A  IA+LAS  +  +TG  + V G
Sbjct: 421 AETIAWLASPASGGVTGNVVRVCG 444

Length = 450

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 78.9 bits (194), Expect = 2e-17
 Identities = 68/255 (26%), Positives = 116/255 (45%), Gaps = 31/255 (12%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVI-----SSRKQKNVDKAVEKLKALGIEVIGII 67
           ++A VT    GIG  + +RL  +G  VV      S R+     K +E  KALG + I   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRR----VKWLEDQKALGFDFIASE 59

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL----WEINVK 123
            +V +    K   DK   + G IDV V NA +         T++ V  K+    W   + 
Sbjct: 60  GNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGI---------TRDVVFRKMTREDWTAVID 110

Query: 124 SSILLMQDAAPHMQKG------SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           +++  + +    +  G        ++ ISS+ G +       Y   K  + G T +LA E
Sbjct: 111 TNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQE 170

Query: 178 MAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +A     VN V+PG++ T   +A+   D + K +     + RLG+   + + +A+LAS++
Sbjct: 171 VATKGVTVNTVSPGYIGTDMVKAIR-PDVLEKIV-ATIPVRRLGSPDEIGSIVAWLASEE 228

Query: 237 ASYITGETLVVAGGM 251
           + + TG    + GG+
Sbjct: 229 SGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 78.7 bits (194), Expect = 2e-17
 Identities = 71/274 (25%), Positives = 104/274 (37%), Gaps = 65/274 (23%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           V+T +  GIG   AE L   G +V+    ++ +                 +I  +S  + 
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGIDLREAD-----------------VIADLSTPEG 45

Query: 76  RKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
           R   I   + +  G +D  V  A V                 + ++N      LM+   P
Sbjct: 46  RAAAIADVLARCSGVLDGLVNCAGVGGTTV---------AGLVLKVNYFGLRALMEALLP 96

Query: 135 HMQKGS--SVVFISSIAGYQ----------------PPSAMAM-----------YGVTKT 165
            ++KG   + V +SSIAG                     A+A+           Y  +K 
Sbjct: 97  RLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSKE 156

Query: 166 ALLGLTKALAAEMAPD--TRVNCVAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRL 219
           AL   T+  AA        RVN VAPG V T     F Q   G ++V   +   T + R 
Sbjct: 157 ALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFV---TPMGRR 213

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS 253
                +A  IAFLASD AS+I G  L V GG+ +
Sbjct: 214 AEPDEIAPVIAFLASDAASWINGANLFVDGGLDA 247

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 77.3 bits (191), Expect = 5e-17
 Identities = 52/190 (27%), Positives = 89/190 (46%), Gaps = 13/190 (6%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGAS--VVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           V ++T +++GIG  +AE L   G+   VV+ +R ++ + +  E+L+  G+ V  +   +S
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRP-GLRVTTVKADLS 59

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINVKSSILL 128
           +    + L++   +  G  D+ + NA        + K +   LD   K +++N+ S + L
Sbjct: 60  DAAGVEQLLEAIRKLDGERDLLINNAGS---LGPVSKIEFIDLDELQKYFDLNLTSPVCL 116

Query: 129 MQDAAPHMQKGSS---VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
                   +K      VV +SS A   P     +Y  +K A     + LAAE  PD RV 
Sbjct: 117 TSTLLRAFKKRGLKKTVVNVSSGAAVNPFKGWGLYCSSKAARDMFFRVLAAEE-PDVRVL 175

Query: 186 CVAPGFVPTH 195
             APG V T 
Sbjct: 176 SYAPGVVDTD 185

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 77.0 bits (190), Expect = 6e-17
 Identities = 50/191 (26%), Positives = 89/191 (46%), Gaps = 12/191 (6%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             G   ++T  T GIGL +A +    G +V+I+ R+++ + +A ++L  +   V      
Sbjct: 3   LTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKELPNIHTIV----LD 58

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES--VLDKLWEINVKSSIL 127
           V + +  + L +  + +Y  +D+ + NA +     DL          D   + N+   I 
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQ-RPIDLRDPASDLDKADTEIDTNLIGPIR 117

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           L++   PH+  Q  +++V +SS   + P +A  +Y  TK AL   T AL  ++  DT V 
Sbjct: 118 LIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLK-DTGVE 176

Query: 186 CV--APGFVPT 194
            V   P  V T
Sbjct: 177 VVEIVPPAVDT 187

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 77.5 bits (191), Expect = 7e-17
 Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 27/261 (10%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGII 67
            +GKVA+VT ++ G+G   A+ L   GA VV++SR+       VE+LK L   IE  G  
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRR-------VERLKELRAEIEAEGGA 59

Query: 68  CH-----VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
            H     V++ Q  K  +     + G ID+ V N+ V+     L+    +  D +++ N 
Sbjct: 60  AHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVST-TQKLVDVTPADFDFVFDTNT 118

Query: 123 KSSILLMQDAAPHM----------QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK 172
           + +  + Q+ A  M          + G  ++ I+S+AG +    + +Y ++K A++ +T+
Sbjct: 119 RGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTR 178

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
           A+A E       VN + PG++ T         +  +K L       R+G   ++   +  
Sbjct: 179 AMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQK-LVSMLPRKRVGKPEDLDGLLLL 237

Query: 232 LASDDASYITGETLVVAGGMA 252
           LA+D++ +I G  +    G  
Sbjct: 238 LAADESQFINGAIISADDGFG 258

Length = 258

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 77.3 bits (191), Expect = 7e-17
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 18/192 (9%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
             KVA+VT ++ GIG   AE+L   G  V  +SR               G+E+  +   V
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIP------GVEL--LELDV 54

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINVKSSIL 127
           +++   +  +D+ + + GRIDV V NA V    A     +ES +     L++ NV   + 
Sbjct: 55  TDDASVQAAVDEVIARAGRIDVLVNNAGVGLAGA----AEESSIAQAQALFDTNVFGILR 110

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +   PHM  Q    ++ ISS+ G+ P   MA+Y  +K A+ G +++L  E+     RV
Sbjct: 111 MTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRV 170

Query: 185 NCVAPGFVPTHF 196
           + V P +  T+F
Sbjct: 171 SLVEPAYTKTNF 182

Length = 270

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 76.6 bits (189), Expect = 1e-16
 Identities = 47/192 (24%), Positives = 93/192 (48%), Gaps = 12/192 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVS 71
           K  ++T ++ GIG   A R    GA ++++ R+ + + +  ++L A   ++V+ +   VS
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKVLPLQLDVS 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAA----VNPYAADLLKTKESVLDKLWEINVKSSIL 127
           + +  +  ++   E++  ID+ V NA     ++P     L+  E+++D     NVK  + 
Sbjct: 61  DRESIEAALENLPEEFRDIDILVNNAGLALGLDPAQEADLEDWETMIDT----NVKGLLN 116

Query: 128 LMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +   P M   +   ++ + SIAG  P +   +Y  TK A+   +  L  ++     RV
Sbjct: 117 VTRLILPIMIARNQGHIINLGSIAGRYPYAGGNVYCATKAAVRQFSLNLRKDLIGTGIRV 176

Query: 185 NCVAPGFVPTHF 196
             + PG V T F
Sbjct: 177 TNIEPGLVETEF 188

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 9/208 (4%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           ++T +  G+G  +A R   EG  + ++   ++  ++ ++ L+  G +     C V +   
Sbjct: 4   MITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW--EINVKSSILLMQDAA 133
              L     EK+G IDV V NA V   A+     + S+ D  W   IN+   +   +   
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGV---ASGGFFEELSLEDWDWQIAINLMGVVKGCKAFL 120

Query: 134 PHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPG 190
           P    QK   +V I+S+AG     AM+ Y V K  ++ L++ L  E+A D   V+ V P 
Sbjct: 121 PLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPS 180

Query: 191 FVPTHFAQALLGNDAVRKALEGKTLLNR 218
           F  T+   +  G +   KA  GK LL +
Sbjct: 181 FFQTNLLDSFRGPNPAMKAQVGK-LLEK 207

Length = 270

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 23/259 (8%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVI----SSRKQKNVDKAVEKLKALGIEVIGI 66
           +GKV ++    + +G  +A  L  +GA  V     S+  + + ++ V  +KA G + +  
Sbjct: 7   KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAF 66

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK----TKESVLDKLWEINV 122
              ++     + L D     +GR D+     A+N     L K      E+  D+++ +N 
Sbjct: 67  QADLTTAAAVEKLFDDAKAAFGRPDI-----AINTVGKVLKKPIVEISEAEYDEMFAVNS 121

Query: 123 KSSILLMQDAAPHMQKGSSVVFI--SSIAGYQPPSAMAMYGVTKTALLGLTKALAAE-MA 179
           KS+   +++A  H+     +V +  S +  + P    + Y  +K  +   T+A + E  A
Sbjct: 122 KSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTP--FYSAYAGSKAPVEHFTRAASKEFGA 179

Query: 180 PDTRVNCVAPGFVPTHFAQALLGNDAV----RKALEGKTLLNRLGTTGNMAAAIAFLASD 235
               V  V PG + T F     G +AV      A         L    ++   I FL + 
Sbjct: 180 RGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT- 238

Query: 236 DASYITGETLVVAGGMASR 254
           D  +ITG+T+++ GG  ++
Sbjct: 239 DGWWITGQTILINGGYTTK 257

Length = 257

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 76.1 bits (188), Expect = 2e-16
 Identities = 64/252 (25%), Positives = 110/252 (43%), Gaps = 32/252 (12%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVI---SSRKQKNVDKAVEKLKALGIEVIGIICH 69
           + A+VT + + IG  +A  L   G  V +    SR +   +    +++ALG   + +   
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDE--AEALAAEIRALGRRAVALQAD 67

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPY--AADLLKTKESVLDKLWEINVKSSIL 127
           +++E   + L+ +     G I + V NA++  Y  AA    T+ S  D+    N+++  +
Sbjct: 68  LADEAEVRALVARASAALGPITLLVNNASLFEYDSAASF--TRAS-WDRHMATNLRAPFV 124

Query: 128 LMQDAAPHMQKGSSVVFISSIAG--YQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           L Q  A  +   +  + ++ I    +        Y ++K AL   T+ LA  +AP  RVN
Sbjct: 125 LAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPRIRVN 184

Query: 186 CVAPGFV-------PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
            + PG         P  FA+               T L R  T   +AAA+ +L   DA 
Sbjct: 185 AIGPGPTLPSGRQSPEDFARQHAA-----------TPLGRGSTPEEIAAAVRYLL--DAP 231

Query: 239 YITGETLVVAGG 250
            +TG+ + V GG
Sbjct: 232 SVTGQMIAVDGG 243

Length = 258

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 76.2 bits (188), Expect = 2e-16
 Identities = 67/195 (34%), Positives = 102/195 (52%), Gaps = 20/195 (10%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           Q KVA+VT ++ GIG   A RL  +G +V  ++R+   VDK +E L +LG+  + +   V
Sbjct: 2   QKKVALVTGASSGIGKATARRLAAQGYTVYGAARR---VDK-MEDLASLGVHPLSL--DV 55

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINVKSSIL 127
           ++E   K  +D  + + GRIDV V NA    Y A     ++  +D   + +E+N+  +  
Sbjct: 56  TDEASIKAAVDTIIAEEGRIDVLVNNAGYGSYGA----IEDVPIDEARRQFEVNLFGAAR 111

Query: 128 LMQDAAPHM--QKGSSVVFISSIAG--YQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
           L Q   PHM  Q+   ++ ISS+ G  Y P    A Y  TK AL G + AL  E+AP   
Sbjct: 112 LTQLVLPHMRAQRSGRIINISSMGGKIYTPLG--AWYHATKFALEGFSDALRLEVAPFGI 169

Query: 183 RVNCVAPGFVPTHFA 197
            V  + PG + T + 
Sbjct: 170 DVVVIEPGGIKTEWG 184

Length = 273

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 75.7 bits (187), Expect = 2e-16
 Identities = 54/206 (26%), Positives = 91/206 (44%), Gaps = 30/206 (14%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG----IEVIGII 67
           GKV V+T +  GIG   A  L   GA V+I+ R ++  ++A  ++K       +EV  I 
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAHVIIACRNEEKGEEAAAEIKKETGNAKVEV--IQ 58

Query: 68  CHVSN-EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
             +S+    R+   ++ + ++ R+D+ + NA +   A     TK+   +  + +N     
Sbjct: 59  LDLSSLASVRQ-FAEEFLARFPRLDILINNAGI--MAPPRRLTKDG-FELQFAVNYLGHF 114

Query: 127 LLMQDAAPHMQKGSS--VVFISSIAGYQPP--------------SAMAMYGVTKTALLGL 170
           LL     P ++  +   +V +SSIA    P              S    YG +K A +  
Sbjct: 115 LLTNLLLPVLKASAPSRIVNVSSIAHRAGPIDFNDLDLENNKEYSPYKAYGQSKLANILF 174

Query: 171 TKALAAEMAPD--TRVNCVAPGFVPT 194
           T+ LA  +     T VN + PG V T
Sbjct: 175 TRELARRLEGTGVT-VNALHPGVVRT 199

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 75.3 bits (186), Expect = 3e-16
 Identities = 68/250 (27%), Positives = 119/250 (47%), Gaps = 15/250 (6%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
           +GK  ++   A+ + I  G+A+ L  +GA +  + + ++ ++K VE+L + LG +++ + 
Sbjct: 5   EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGER-LEKRVEELAEELGSDLV-LP 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINVKS 124
           C V+N++    L     +K+G++D  V + A  P      D L T         +I+  S
Sbjct: 63  CDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYS 122

Query: 125 SILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEMAPD 181
              L + A P M  G S++ ++ +   +    +  Y   GV K AL    + LAA++  +
Sbjct: 123 FTALAKAARPLMNNGGSILTLTYLGSER---VVPNYNVMGVAKAALEASVRYLAADLGKE 179

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN ++ G + T  A  +     + K  E    L R  T   +    AFL SD +S I
Sbjct: 180 GIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGI 239

Query: 241 TGETLVVAGG 250
           TGE + V  G
Sbjct: 240 TGEIIYVDSG 249

Length = 259

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 75.6 bits (186), Expect = 3e-16
 Identities = 69/243 (28%), Positives = 103/243 (42%), Gaps = 8/243 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A+VT +  GIG  +A R    G  V+        +    + L       + + C +++
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDAR--FVPVACDLTD 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                  +     + G +DV V NA     AA L  T  +       +N++++ L ++  
Sbjct: 61  AASLAAALANAAAERGPVDVLVANAGA-ARAASLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 133 APHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAP 189
              M K S  +VV I S+ G       A Y   K  L+  TK LA E      R N VAP
Sbjct: 120 LEGMLKRSRGAVVNIGSVNGMAALGHPA-YSAAKAGLIHYTKLLAVEYGRFGIRANAVAP 178

Query: 190 GFVPTHFAQA-LLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           G V T   +A +  N  V + L+    L    T  ++A A+ FLAS  A  ITG  L V 
Sbjct: 179 GTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPVD 238

Query: 249 GGM 251
           GG+
Sbjct: 239 GGL 241

Length = 257

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 76.9 bits (190), Expect = 5e-16
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 5/192 (2%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
              F GK+ VVT +  GIG   A     EGA VV S   +   ++  E ++A G      
Sbjct: 310 RGPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAY 369

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              VS+    +   +    ++G  D+ V NA +   A   L T     D++ ++N+   I
Sbjct: 370 RVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIG-MAGGFLDTSAEDWDRVLDVNLWGVI 428

Query: 127 LLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
              +     M     G  +V ++S A Y P  ++  Y  +K A+L L++ L AE+A    
Sbjct: 429 HGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGI 488

Query: 183 RVNCVAPGFVPT 194
            V  + PGFV T
Sbjct: 489 GVTAICPGFVDT 500

Length = 582

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 74.4 bits (183), Expect = 9e-16
 Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 16/251 (6%)

Query: 12  GKVAVVT--ASTQGIGLGVAERLGLEGASVVIS------SRKQKNVDKAVEKLKALGIEV 63
           GK A+VT  A+ + I  G+A++L   GA + I+       R +K V +  E L       
Sbjct: 6   GKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNP----S 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEI 120
           + + C V ++   +   +   +K+G++D+ V   A         D   T      +  EI
Sbjct: 62  LFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEI 121

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +  S   L + A P M +G S+V ++ + G +      + GV K AL    + LAAE+ P
Sbjct: 122 SAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGP 181

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              RVN ++ G + T  + A+ G   +   +E K  L R  T   +    AFL SD AS 
Sbjct: 182 KNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG 241

Query: 240 ITGETLVVAGG 250
           ITG+T+ V  G
Sbjct: 242 ITGQTIYVDAG 252

Length = 258

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 63/246 (25%), Positives = 103/246 (41%), Gaps = 22/246 (8%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F  K  ++T +  GIGL  A     +GA V    ++ K           L +++      
Sbjct: 3   FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDK--PDLSGNFHFLQLDL------ 54

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAA--VNPYAADLLKTKESVLDKLWEINVKSSIL 127
            S++      ++   +    +D+ + N A  ++ Y   LL T       +++ N+ S+ L
Sbjct: 55  -SDD------LEPLFDWVPSVDI-LCNTAGILDDYKP-LLDTSLEEWQHIFDTNLTSTFL 105

Query: 128 LMQDAAPHMQKGSSVVFI--SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
           L +   P M +  S + I   SIA +      A Y  +K AL G TK LA + A D  +V
Sbjct: 106 LTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
             +APG V T    A      +   +  +T + R      +A    FLAS  A Y+ G  
Sbjct: 166 FGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTI 225

Query: 245 LVVAGG 250
           + + GG
Sbjct: 226 VPIDGG 231

Length = 235

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 72.7 bits (179), Expect = 2e-15
 Identities = 42/183 (22%), Positives = 84/183 (45%), Gaps = 4/183 (2%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            ++T ++ GIG  +A      G +V +++R+   +D+   +L      V   I  V++E+
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
             + +I +   + G +D+ ++NA V      L         +  + N+  +  +++ A P
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGVG-KGTSLGDLSFKAFRETIDTNLLGAAAILEAALP 119

Query: 135 HMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGF 191
             +      +V ISS+A  +     A Y  +K AL  L ++L  ++     RV  + PGF
Sbjct: 120 QFRAKGRGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINPGF 179

Query: 192 VPT 194
           + T
Sbjct: 180 IDT 182

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 73.8 bits (182), Expect = 3e-15
 Identities = 39/175 (22%), Positives = 78/175 (44%), Gaps = 3/175 (1%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M K    +V V+T ++ G+G   A      GA VV+ +R ++ ++    +++A G E + 
Sbjct: 2   MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALA 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           ++  V++ +  +   D+  E+ G ID +V NA V  +             ++ E+     
Sbjct: 62  VVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVFGP-FEDVTPEEFRRVTEVTYLGV 120

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           +     A  HM  +   +++ + S   Y+     + Y   K A+ G T +L  E+
Sbjct: 121 VHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCEL 175

Length = 334

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 71.9 bits (177), Expect = 4e-15
 Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 12/189 (6%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            ++T +++GIGL +  +L   G + VI++ +  +    +  L A    +  +   V++E 
Sbjct: 1   VLITGASRGIGLELVRQLLARGNNTVIATCRDPSAATELAALGASHSRLHILELDVTDEI 60

Query: 75  HRKNLIDKTVEKYG--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                 +   E+ G   +DV + NA +        +     L +++++NV   +LL Q  
Sbjct: 61  AES--AEAVAERLGDAGLDVLINNAGILHSYGPASEVDSEDLLEVFQVNVLGPLLLTQAF 118

Query: 133 APHMQKGSS--VVFISSIAG---YQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
            P + KG+   ++ ISS  G            Y  +K AL  LTK+LA E+  D  +  V
Sbjct: 119 LPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRD-GITVV 177

Query: 188 A--PGFVPT 194
           +  PG+V T
Sbjct: 178 SLHPGWVRT 186

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 72.7 bits (178), Expect = 4e-15
 Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 32/266 (12%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRK-----QKNVDKAVEKLKALGIEVIGIIC 68
            AVVT + + IG  +A  L  EG  VV+   +          +   +     +     + 
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 69  HVSNEQHR-KNLIDKTVEKYGRIDVFVLNAAVNPYAADLL-----------KTKESVLDK 116
           + +    R + +ID     +GR DV V NA+   Y   LL           K+ E  + +
Sbjct: 63  NSATLFSRCEAIIDACFRAFGRCDVLVNNASAF-YPTPLLRGDAGEGVGDKKSLEVQVAE 121

Query: 117 LWEINVKSSILLMQDAAPHMQKGS---------SVVFISSIAGYQPPSAMAMYGVTKTAL 167
           L+  N  +   L++  A   Q G+         S+V +      QP     MY + K AL
Sbjct: 122 LFGSNAIAPYFLIKAFA-QRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHAL 180

Query: 168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMA 226
            GLT++ A E+AP   RVN VAPG      A      +  R+ +    L  R  +   +A
Sbjct: 181 EGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPFEVQEDYRRKV---PLGQREASAEQIA 237

Query: 227 AAIAFLASDDASYITGETLVVAGGMA 252
             + FL S  A YITG  + V GG++
Sbjct: 238 DVVIFLVSPKAKYITGTCIKVDGGLS 263

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 72.1 bits (177), Expect = 5e-15
 Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 12/139 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHV 70
           GK A+VT S++GIG   A+ L   GA VV++ R K    +K V +++A G     +   +
Sbjct: 6   GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADL 65

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW--EINVKSSILL 128
           ++E+    L+D   E++G +D  VLNA+            ES +D+ +   +N  +   L
Sbjct: 66  TDEESVAALMDTAREEFGGLDALVLNASGGM---------ESGMDEDYAMRLNRDAQRNL 116

Query: 129 MQDAAPHMQKGSSVVFISS 147
            + A P M  GS VVF++S
Sbjct: 117 ARAALPLMPAGSRVVFVTS 135

Length = 248

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 71.1 bits (175), Expect = 5e-15
 Identities = 44/182 (24%), Positives = 66/182 (36%), Gaps = 30/182 (16%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            +V  +T  IGL VA+ L   G  V+ + R   +                     +++E 
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGDY-----------------QVDITDEA 43

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE----SVLDKLWEINVKSSILLMQ 130
             K L +K     G  D  V  A    +A     T       +  KL        I L++
Sbjct: 44  SIKALFEKV----GHFDAIVSTAGDAEFAPLAELTDADFQRGLNSKLL-----GQINLVR 94

Query: 131 DAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG 190
              P++  G S+   S I   +P    A       AL G  +A A E+    R+N V+PG
Sbjct: 95  HGLPYLNDGGSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIELPRGIRINAVSPG 154

Query: 191 FV 192
            V
Sbjct: 155 VV 156

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 70.9 bits (174), Expect = 1e-14
 Identities = 53/197 (26%), Positives = 94/197 (47%), Gaps = 12/197 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           +  G   ++T    GIGL +A+R    G +V+I  R ++ + +A    KA   E+   +C
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEA----KAENPEIHTEVC 57

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI--NVKSSI 126
            V++   R+ L++   ++Y  ++V + NA +     DL   ++ + D   EI  N+ + I
Sbjct: 58  DVADRDSRRELVEWLKKEYPNLNVLINNAGIQ-RNEDLTGAEDLLDDAEQEIATNLLAPI 116

Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRV 184
            L     PH+  Q  ++++ +SS   + P ++  +Y  TK A+   T AL  E   DT V
Sbjct: 117 RLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLAL-REQLKDTSV 175

Query: 185 NC--VAPGFVPTHFAQA 199
               +AP  V T     
Sbjct: 176 EVIELAPPLVDTTEGNT 192

Length = 245

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 71.1 bits (174), Expect = 1e-14
 Identities = 60/243 (24%), Positives = 101/243 (41%), Gaps = 20/243 (8%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC-- 68
             ++ +VT ++ GIG   A      GA+V++  R ++ + +  + +   G          
Sbjct: 3   NDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKLRQVADHINEEGGRQPQWFILD 62

Query: 69  --HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
               ++E  ++ L  +    Y R+D  + NA +      L +    V   + ++NV ++ 
Sbjct: 63  LLTCTSENCQQ-LAQRIAVNYPRLDGVLHNAGLLGDVCPLSEQNPQVWQDVXQVNVNATF 121

Query: 127 LLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           +L Q   P + K    S+VF SS  G Q  +    Y V+K A  GL + LA E    + R
Sbjct: 122 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQRNLR 181

Query: 184 VNCVAPGFVPTHF-AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           VNC+ PG   T   A A    D             +L T  ++     +L  DD+   TG
Sbjct: 182 VNCINPGGTRTAMRASAFPTEDP-----------QKLKTPADIMPLYLWLMGDDSRRKTG 230

Query: 243 ETL 245
            T 
Sbjct: 231 MTF 233

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 69.4 bits (170), Expect = 5e-14
 Identities = 57/255 (22%), Positives = 108/255 (42%), Gaps = 16/255 (6%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICH 69
             +VAVV    Q +G  +   L   G  V ++    +N +K  +++ A  G +  G    
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYDVAVADINSENAEKVADEINAEYGEKAYGFGAD 60

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            +NEQ    L     E + R+D+ V +A +   +A +   +    D+  ++N+    L  
Sbjct: 61  ATNEQSVIALSKGVDEIFKRVDLLVYSAGI-AKSAKITDFELGDFDRSLQVNLVGYFLCA 119

Query: 130 QDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
           ++ +  M +      ++ I+S +G       + Y   K   +GLT++LA ++A     VN
Sbjct: 120 REFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGITVN 179

Query: 186 CVAPG----------FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            +  G           +P +  +  +    V +    K  L R     ++   + F AS 
Sbjct: 180 SLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP 239

Query: 236 DASYITGETLVVAGG 250
            ASY TG+++ + GG
Sbjct: 240 KASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 69.3 bits (170), Expect = 6e-14
 Identities = 50/177 (28%), Positives = 87/177 (49%), Gaps = 14/177 (7%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSR---KQKNVDKAVEKLKALG-IEVIGII 67
            K+A+VT ++ G GL     L  +G  V+ + R   KQ+N+     +L     I+V  + 
Sbjct: 3   KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQL- 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLDKLWEINVKSS 125
             V+++    N     +++ GRID+ V NA  A   +  ++   +     K +E NV  +
Sbjct: 62  -DVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEE---YRKQFETNVFGA 116

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           I + Q   P+M  QK   ++ ISSI+G      ++ Y  +K AL G +++L  E+ P
Sbjct: 117 ISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKP 173

Length = 280

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 43/184 (23%), Positives = 83/184 (45%), Gaps = 9/184 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE-VIGIICH 69
             K  ++T  + G G  +A+     G  VV + R +     A    +AL  +  +  +  
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEA----ARADFEALHPDRALARLLD 58

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++      ++      +G IDV V NA    +   + ++  + + + +E+NV  ++ + 
Sbjct: 59  VTDFDAIDAVVADAEATFGPIDVLVNNAGYG-HEGAIEESPLAEMRRQFEVNVFGAVAMT 117

Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           +   P M+      +V I+S+ G      +  Y  +K AL G++++LA E+AP    V  
Sbjct: 118 KAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTA 177

Query: 187 VAPG 190
           V PG
Sbjct: 178 VEPG 181

Length = 277

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 1e-13
 Identities = 67/269 (24%), Positives = 108/269 (40%), Gaps = 36/269 (13%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA---------VEKLKALGI 61
            G+V +VT +  GIG   A     EGA VV++         A         V+++ A G 
Sbjct: 5   DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGG 64

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWE 119
           E +     +++     NL+D  VE +G +DV V NA +     D  +    E   D +  
Sbjct: 65  EAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGI---LRDRMIANMSEEEWDAVIA 121

Query: 120 INVKSSILLMQDAAPHMQKGS--------SVVFISSIAGYQPPSAMAMYGVTKTALLGLT 171
           +++K     ++ AA + +  S         ++  SS AG Q       Y   K  +  LT
Sbjct: 122 VHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALT 181

Query: 172 KALAAEMAP-DTRVNCVAP----GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMA 226
              AAE+      VN +AP        T FA      + + K  EG+          N++
Sbjct: 182 LVAAAELGRYGVTVNAIAPAARTRMTETVFA------EMMAKPEEGEF---DAMAPENVS 232

Query: 227 AAIAFLASDDASYITGETLVVAGGMASRL 255
             + +L S ++  +TG+   V GG  S  
Sbjct: 233 PLVVWLGSAESRDVTGKVFEVEGGKISVA 261

Length = 286

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 67.7 bits (166), Expect = 2e-13
 Identities = 67/251 (26%), Positives = 95/251 (37%), Gaps = 64/251 (25%)

Query: 52  AVEKLKALGIEVIGIICHVSN----EQHRKNL-----IDKTVEKY-GRIDVFVLNAAVNP 101
               L+ LG  VIG+             + +L     ID  V    GRID  + N A  P
Sbjct: 1   TARLLRFLGARVIGVDRREPGMTLDGFIQADLGDPASIDAAVAALPGRIDA-LFNIAGVP 59

Query: 102 YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM-- 159
             A +    E V      +N      L +   P M  G ++V ++S+AG + P  + +  
Sbjct: 60  GTAPV----ELVA----RVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHK 111

Query: 160 -------------------------YGVTKTALL--GLTKALAAEMAPDTRVNCVAPGFV 192
                                    Y ++K AL+   + +A     A   RVNCVAPG V
Sbjct: 112 ALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPV 171

Query: 193 PT----HFAQAL----LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
            T     F   L    + +DA R        + R  T    AA + FL SD A +I G  
Sbjct: 172 FTPILGDFRSMLGQERVDSDAKR--------MGRPATADEQAAVLVFLCSDAARWINGVN 223

Query: 245 LVVAGGMASRL 255
           L V GG+A+  
Sbjct: 224 LPVDGGLAATY 234

Length = 241

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 68.2 bits (167), Expect = 2e-13
 Identities = 59/200 (29%), Positives = 97/200 (48%), Gaps = 19/200 (9%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M     G V V+T ++ GIG   AE     GA +V+++R ++ +    E+ +ALG EV+ 
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA---AVNPYAADLLKTKESVLDKLWEINV 122
           +   V++    K L  +     GRIDV+V N    AV  +    ++  E V        +
Sbjct: 61  VPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQV--------I 112

Query: 123 KSSIL-LMQDA---APHMQKGSSVVFIS--SIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           +++++  M+DA    P  +K    +FI+  S+ G+      A Y  +K  L G ++AL  
Sbjct: 113 QTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRG 172

Query: 177 EMA--PDTRVNCVAPGFVPT 194
           E+A  PD  V  V P F+ T
Sbjct: 173 ELADHPDIHVCDVYPAFMDT 192

Length = 330

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 67.3 bits (164), Expect = 2e-13
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 14/201 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGI 66
                K  +VT ++QG+G  VA+     GA+V++ +R QK ++K  + +   G  E   I
Sbjct: 2   ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAI 61

Query: 67  ---ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL--KTKESVLDKLWEIN 121
              +     ++  +          G++D  V + A   YA   L  +T    +++ + IN
Sbjct: 62  RFDLMSAEEKEFEQFAATIAEATQGKLDGIV-HCAGYFYALSPLDFQTVAEWVNQ-YRIN 119

Query: 122 VKSSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE-- 177
             + + L +   P +++   +SV+F+    G  P +    +G +K AL  L K  A E  
Sbjct: 120 TVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWE 179

Query: 178 MAPDTRVNCVAPGFVPTHFAQ 198
              + R N + PG  P +  Q
Sbjct: 180 RFGNLRANVLVPG--PINSPQ 198

Length = 239

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 66.9 bits (164), Expect = 3e-13
 Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 21/260 (8%)

Query: 5   NMAKRFQGKVAVVT--ASTQGIGLGVAE---RLGLEGASVVISSRKQKNVDKAVEKLKAL 59
                  GK  +V   A+ Q I  G A     LG E A   ++ + +  V+   E+L A 
Sbjct: 3   QPLLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAP 62

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---- 115
               I +   V      + +  +  E++GR+D  + + A  P   DL      V+D    
Sbjct: 63  ----IFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAP-KEDL---HGRVVDCSRE 114

Query: 116 ---KLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK 172
                 +++  S I + + A P M  G S++ +S     +      + G  K AL    +
Sbjct: 115 GFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVR 174

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
            LAAE+ P   RV+ ++PG + T  A  +   DA+ +    +  L RL    ++ A  AF
Sbjct: 175 YLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAF 234

Query: 232 LASDDASYITGETLVVAGGM 251
           LASD A  +TG TL + GG 
Sbjct: 235 LASDAARRLTGNTLYIDGGY 254

Length = 258

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 65.7 bits (161), Expect = 7e-13
 Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 20/212 (9%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKV +VT + +GIG    E+L   GA+ V  ++R  ++V     ++  L ++V     
Sbjct: 4   IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDLGPRVVPLQLDV----- 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
             ++       +    E    + + V NA +    + LL+  E  L    E N    + +
Sbjct: 59  --TDPA----SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAM 112

Query: 129 MQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            +  AP +    G ++V + S+  +     +  Y  +K A   LT+AL AE+AP  TRV 
Sbjct: 113 ARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVL 172

Query: 186 CVAPGFVPTHFAQALLG-----NDAVRKALEG 212
            V PG + T  A  L        D  R+ L+ 
Sbjct: 173 GVHPGPIDTDMAAGLDAPKASPADVARQILDA 204

Length = 238

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 23/191 (12%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            +V +V      +G  V +     G  V   S      ++A   +  L  +        S
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVA--SIDLAENEEADASIIVLDSD--------S 50

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAA-----VNPYAADLLKTKESVLDKLWEINVKSSI 126
             +  K ++       G++D  +   A      +  +   +K      D +W+ N+ +S 
Sbjct: 51  FTEQAKQVVASVARLSGKVDALI-CVAGGWAGGSAKSKSFVKN----WDLMWKQNLWTSF 105

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE---MAPDTR 183
           +    A  H+  G  +V   + A  +P   M  YG  K A+  LT++LAAE   +   + 
Sbjct: 106 IASHLATKHLLSGGLLVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGST 165

Query: 184 VNCVAPGFVPT 194
            N + P  + T
Sbjct: 166 ANAILPVTLDT 176

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 65.1 bits (159), Expect = 1e-12
 Identities = 46/173 (26%), Positives = 82/173 (47%), Gaps = 10/173 (5%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVSN 72
           VA V  +  G+G  +A R   EG SV +++R++  ++   V+ ++  G     +     +
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           E     L D   E+ G ++V V NA  N     +L+T   V +K+WE+      L  ++A
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAGAN-VWFPILETTPRVFEKVWEMAAFGGFLAAREA 119

Query: 133 APHM--QKGSSVVFI---SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           A  M  +   +++F    +S+ G    +A A     K AL  L +++A E+ P
Sbjct: 120 AKRMLARGRGTIIFTGATASLRGRAGFAAFAG---AKFALRALAQSMARELGP 169

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 64.7 bits (158), Expect = 2e-12
 Identities = 55/200 (27%), Positives = 89/200 (44%), Gaps = 11/200 (5%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            + K  +VT + +GIG    E L   GA  V  + R   +    V K    G +V+ +  
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKKVYAAVRDPGSAAHLVAKY---GDKVVPLRL 57

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++ +  K    +  +    +DV + NA V   A  L +     L +  ++NV   + L
Sbjct: 58  DVTDPESIKAAAAQAKD----VDVVINNAGVLKPATLLEEGALEALKQEMDVNVFGLLRL 113

Query: 129 MQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            Q  AP ++   G ++V ++S+A  +   AM  Y  +K+A   LT+ L AE+A   T V 
Sbjct: 114 AQAFAPVLKANGGGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 186 CVAPGFVPTHFAQALLGNDA 205
            V PG + T  A    G   
Sbjct: 174 SVHPGPIDTRMAAGAGGPKE 193

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 64.8 bits (158), Expect = 2e-12
 Identities = 62/237 (26%), Positives = 107/237 (45%), Gaps = 7/237 (2%)

Query: 19  ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRK 77
           A+ + I  G+A+    +GA +  +   +  + K VE +   LG + +     VS  +H K
Sbjct: 14  ANNKSIAYGIAKACFEQGAELAFTYLNEA-LKKRVEPIAQELGSDYV-YELDVSKPEHFK 71

Query: 78  NLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINVKSSILLMQDAAP 134
           +L +   +  G+ID  V + A  P  A     L+T +   +   EI+V S I L +   P
Sbjct: 72  SLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLP 131

Query: 135 HMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVP 193
            +  G+SV+ +S + G +      + GV K AL    + LA ++     RVN ++ G + 
Sbjct: 132 LLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIK 191

Query: 194 THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
           T  A  +     + K  E    L +  +   +  +  +L SD +S +TGE   V  G
Sbjct: 192 TLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVTGEIHYVDAG 248

Length = 274

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 64.0 bits (156), Expect = 3e-12
 Identities = 55/218 (25%), Positives = 99/218 (45%), Gaps = 27/218 (12%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-------AVEKLKALGIE 62
             GK   +T +++GIG  +A +   +GA+VVI+++  +   K       A E+++A G +
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEIN 121
            +  I  + +E   +  ++K VEK+G ID+ V NA A++      L T     D +  +N
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAIS--LTGTLDTPMKRYDLMMGVN 118

Query: 122 VKSSILLMQDAAPHMQKGSSVVFISSIAG--------YQPPSA--MAMYGVTKTALLGLT 171
            + + L  +   P++ K S    I +++         ++  +A  MA YG++   L    
Sbjct: 119 TRGTYLCSKACLPYL-KKSKNPHILNLSPPLNLNPKWFKNHTAYTMAKYGMSMCVL---- 173

Query: 172 KALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRK 208
             +A E  P    VN + P       A  +LG   V  
Sbjct: 174 -GMAEEFKPGGIAVNALWPRTAIATAAMNMLGGVDVAA 210

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 64.2 bits (157), Expect = 4e-12
 Identities = 48/224 (21%), Positives = 95/224 (42%), Gaps = 6/224 (2%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            GKV VVT + +GIG  +A RL   GA + +   ++  +     +L      V+ ++  V
Sbjct: 8   AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAEL-GGDDRVLTVVADV 66

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           ++    +   ++ VE++G IDV V NA +    + + +       ++ ++N+      ++
Sbjct: 67  TDLAAMQAAAEEAVERFGGIDVVVANAGIASGGS-VAQVDPDAFRRVIDVNLLGVFHTVR 125

Query: 131 DAAPH-MQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
              P  +++   V+ +SS+A +     MA Y  +K  +     AL  E+A     V    
Sbjct: 126 ATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAY 185

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKT--LLNRLGTTGNMAAAIA 230
             ++ T   +    +    + L  +    L R  +    AAA  
Sbjct: 186 LSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFV 229

Length = 296

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 4e-12
 Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 50/274 (18%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +V VV  +  GIG  +A R+G  G  V+++   ++N++ A + L+  G +V      VS+
Sbjct: 3   EVVVVIGAG-GIGQAIARRVGA-GKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSS 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +  K L   T +  G +   V  A V+P  A    + E++L    ++++  + L++++ 
Sbjct: 61  RESVKALAA-TAQTLGPVTGLVHTAGVSPSQA----SPEAIL----KVDLYGTALVLEEF 111

Query: 133 APHMQKGSSVVFISSIAGYQPPS-------AMAMYGVTKTALLGLTKALAAEMAPDT--- 182
              +  G + V I+S +G++ P+       A+A    T T  L     L  +   D+   
Sbjct: 112 GKVIAPGGAGVVIASQSGHRLPALTAEQERALAT---TPTEELLSLPFLQPDAIEDSLHA 168

Query: 183 ------------------------RVNCVAPGFVPTHFAQALLGND--AVRKALEGKTLL 216
                                   R+N ++PG + T  AQ  L        + +  K+  
Sbjct: 169 YQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA 228

Query: 217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
            R GT   +AA   FL     S+ITG   +V GG
Sbjct: 229 GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 62.8 bits (153), Expect = 1e-11
 Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 11/254 (4%)

Query: 6   MAKRFQGKVAVV--TASTQGIGLGVAERLGLEGASVVISSRKQ---KNVDKAVEKLKALG 60
           M    +GK  VV   A+ + I  G+A  L   GA +V +   +   K V +  + L+  G
Sbjct: 1   MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--G 58

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF---VLNAAVNPYAADLLKTKESVLDKL 117
            E + + C V++++      +   E+ G I      +  A       + L+T        
Sbjct: 59  QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLA 118

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
             I+  S   + ++A   M +G S+V ++ + G +      + GV K +L    K LA +
Sbjct: 119 QNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLAND 178

Query: 178 MAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +  D  RVN ++ G + T  A+ + G +++ K +E +  L R  T   +    AFL SD 
Sbjct: 179 LGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDL 238

Query: 237 ASYITGETLVVAGG 250
           +  +TGE + V  G
Sbjct: 239 SRGVTGENIHVDSG 252

Length = 257

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 61.9 bits (151), Expect = 1e-11
 Identities = 61/246 (24%), Positives = 108/246 (43%), Gaps = 30/246 (12%)

Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           ++T + Q IGL +A  L  +G  V++S R       A++ L+  G     I    S    
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHY---PAIDGLRQAG--AQCIQADFSTNAG 60

Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES-VLDKLWEINVKSSILLMQDAAP 134
               ID+  +    +   + NA+   + A+      + VL ++ +I+V +  LL      
Sbjct: 61  IMAFIDELKQHTDGLRAIIHNASD--WLAEKPGAPLADVLARMMQIHVNAPYLLNLALED 118

Query: 135 HMQKG----SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG 190
            ++      S ++ I+     +       Y  +K AL  +T + AA++AP+ +VN +AP 
Sbjct: 119 LLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAP- 177

Query: 191 FVPTHFAQALL----GNDAV--RKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
                   AL+    G+DA   +KAL  K+LL        +   + +L    + Y+TG +
Sbjct: 178 --------ALILFNEGDDAAYRQKALA-KSLLKIEPGEEEIIDLVDYLL--TSCYVTGRS 226

Query: 245 LVVAGG 250
           L V GG
Sbjct: 227 LPVDGG 232

Length = 236

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 61.1 bits (149), Expect = 4e-11
 Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 20/191 (10%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             + K  ++T ++ GIG  +AE L   GA +++  R  + ++    +L   G     ++ 
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRW-VVA 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +++E  R+ ++ +   + G I+V + NA VN +A  L       +++L  +N+ + + L
Sbjct: 61  DLTSEAGREAVLAR-AREMGGINVLINNAGVNHFAL-LEDQDPEAIERLLALNLTAPMQL 118

Query: 129 MQDAAPHMQKGSS--VVFISSI------AGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            +   P ++   S  VV + S        GY      A Y  +K AL G ++AL  E+A 
Sbjct: 119 TRALLPLLRAQPSAMVVNVGSTFGSIGYPGY------ASYCASKFALRGFSEALRRELA- 171

Query: 181 DTRVNC--VAP 189
           DT V    +AP
Sbjct: 172 DTGVRVLYLAP 182

Length = 263

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 59.9 bits (146), Expect = 1e-10
 Identities = 61/242 (25%), Positives = 105/242 (43%), Gaps = 18/242 (7%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN---VDKAVEKLKALGIEVIGII 67
           + ++ +VT +  GIG   A      GA+V++  R ++    V   +E        +I + 
Sbjct: 11  KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLD 70

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
              +  Q+ + L D   E++GR+D  + NA +      + +    V   + ++NV ++ +
Sbjct: 71  LLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFM 130

Query: 128 LMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L Q   P + K   +S+VF SS  G Q  +    Y V+K A  G+ + LA E      RV
Sbjct: 131 LTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRV 190

Query: 185 NCVAPGFVPTHF-AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           NC+ PG   T   A A  G D             +L T  ++     +L  DD+    G+
Sbjct: 191 NCINPGGTRTAMRASAFPGEDP-----------QKLKTPEDIMPLYLYLMGDDSRRKNGQ 239

Query: 244 TL 245
           + 
Sbjct: 240 SF 241

Length = 247

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 9/188 (4%)

Query: 17  VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI-ICHVSNEQH 75
           +T ++ G G G+ ERL   G  V  + R+      A++ LKA   + + +    V++   
Sbjct: 7   ITGASSGFGRGMTERLLARGDRVAATVRRPD----ALDDLKARYGDRLWVLQLDVTDSAA 62

Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPH 135
            + ++D+     GRIDV V NA    + A    +   +  +  + N+  SI +++ A PH
Sbjct: 63  VRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQI-RRQIDTNLIGSIQVIRAALPH 121

Query: 136 M--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFV 192
           +  Q G  +V +SS  G       ++Y  TK  + G  +A+A E+AP       V PG  
Sbjct: 122 LRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPA 181

Query: 193 PTHFAQAL 200
            T+F   L
Sbjct: 182 RTNFGAGL 189

Length = 276

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 59.4 bits (144), Expect = 2e-10
 Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 13/190 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
            V ++T  + GIG  +A+     G  V  ++RK ++    VE L A G   + +   V++
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAED----VEALAAAGFTAVQL--DVND 55

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA--DLLKTKESVLDKLWEINVKSSILLMQ 130
                 L ++   ++G +DV + NA    Y A   LL      + + +E NV + + + +
Sbjct: 56  GAALARLAEELEAEHGGLDVLINNAG---YGAMGPLLDGGVEAMRRQFETNVFAVVGVTR 112

Query: 131 DAAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
              P +++    VV I S++G         Y  +K A+  L+ AL  E+AP   +V  V 
Sbjct: 113 ALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172

Query: 189 PGFVPTHFAQ 198
           PG + + FA 
Sbjct: 173 PGAIASQFAS 182

Length = 274

>gnl|CDD|181298 PRK08219, PRK08219, short chain dehydrogenase; Provisional

 Score = 58.8 bits (143), Expect = 2e-10
 Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 27/191 (14%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
             A++T +++GIG  +A  L     ++++  R  + +D+   +L       + +    + 
Sbjct: 4   PTALITGASRGIGAAIAREL-APTHTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAI 62

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVK----- 123
                      VE+ GR+DV V NA V    ADL    ES +D+ W    E+NV      
Sbjct: 63  A--------AAVEQLGRLDVLVHNAGV----ADLGPVAESTVDE-WRATLEVNVVAPAEL 109

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
           + +LL    A H      VVFI+S AG +       Y  +K AL  L  AL  E   + R
Sbjct: 110 TRLLLPALRAAHGH----VVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGNVR 165

Query: 184 VNCVAPGFVPT 194
           V  V PG   T
Sbjct: 166 VTSVHPGRTDT 176

Length = 227

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 59.2 bits (144), Expect = 5e-10
 Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 15/179 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKV ++T ++ GIG   A ++   GA+V + +R  + +D+ V +++A G       C ++
Sbjct: 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLT 430

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNA-------AVNPYAADLLKTKESVLDKLWEINVKS 124
           +     + +   + ++G +D  V NA         N    D     E  +     +N   
Sbjct: 431 DSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENST--DRFHDYERTM----AVNYFG 484

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ L+    PHM  ++   VV +SSI         + Y  +K AL   +   A+E   D
Sbjct: 485 AVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSD 543

Length = 657

>gnl|CDD|235694 PRK06079, PRK06079, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 57.8 bits (140), Expect = 5e-10
 Identities = 59/254 (23%), Positives = 113/254 (44%), Gaps = 15/254 (5%)

Query: 6   MAKRFQGKVAVV--TASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALG 60
           M+    GK  VV   A+ + I  G A+ +  +GA+V+ +    R +K++ K V++     
Sbjct: 1   MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDE----- 55

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA---ADLLKTKESVLDKL 117
            E + + C V++++  +       E+ G+ID  V   A         ++  T        
Sbjct: 56  -EDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALA 114

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
            +I+  S I + + A P +  G+S+V ++     +      + G+ K AL    + LA +
Sbjct: 115 QDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARD 174

Query: 178 MAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +     RVN ++ G V T     + G+  + K  + +T+     T   +    AFL SD 
Sbjct: 175 LGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDL 234

Query: 237 ASYITGETLVVAGG 250
           ++ +TG+ + V  G
Sbjct: 235 STGVTGDIIYVDKG 248

Length = 252

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 2e-09
 Identities = 53/188 (28%), Positives = 74/188 (39%), Gaps = 19/188 (10%)

Query: 17  VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH-----VS 71
           +T +  GIG   A     EG  V          D     L AL  E+           V+
Sbjct: 6   ITGAASGIGRATALLFAAEGWRVGA-------YDINEAGLAALAAELGAGNAWTGALDVT 58

Query: 72  N-EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           +       L D      GR+DV   NA +               D++ +INVK  +    
Sbjct: 59  DRAAWDAALADFAAATGGRLDVLFNNAGI-LRGGPFEDIPLEAHDRVIDINVKGVLNGAH 117

Query: 131 DAAPHMQK--GSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
            A P+++   G+ V+  SS +  Y  P  +A+Y  TK A+ GLT+AL  E      RV  
Sbjct: 118 AALPYLKATPGARVINTSSASAIYGQPG-LAVYSATKFAVRGLTEALDLEWRRHGIRVAD 176

Query: 187 VAPGFVPT 194
           V P FV T
Sbjct: 177 VMPLFVDT 184

Length = 260

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 55.8 bits (135), Expect = 2e-09
 Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            K  ++T +  G G  VA RL  +G +V+   +    V     +    G+ +      ++
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLT 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +       ID+       +DV + NA +   A  ++     ++ +L+E NV   + L Q 
Sbjct: 62  DA------IDRAQAAEWDVDVLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQG 114

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
               M  +    VVF SS+AG         Y  +K AL  + +A+ AE+ P   +V  V 
Sbjct: 115 FVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVN 174

Query: 189 PGFVPTHF 196
           PG   T F
Sbjct: 175 PGPYLTGF 182

Length = 257

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 4e-09
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 7/191 (3%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            KV  +T +++G G    E     G  VV ++R    +    EK    G  ++ +   V+
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVT 59

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +       ++  VE +GR+D+ V NA    +   + +  ES      + N   ++ + Q 
Sbjct: 60  DRAAVFAAVETAVEHFGRLDIVVNNAGYGLFGM-IEEVTESEARAQIDTNFFGALWVTQA 118

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
             P++  Q+   ++ ISSI G        +Y  +K AL G+++ALA E+A    +V  V 
Sbjct: 119 VLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVE 178

Query: 189 PGFVPTHFAQA 199
           PG   T +A  
Sbjct: 179 PGGYSTDWAGT 189

Length = 275

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 57/249 (22%), Positives = 103/249 (41%), Gaps = 9/249 (3%)

Query: 10  FQGKVAVVTA--STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            QGK  ++T   S + I  G+A+    +GA +  +    K  ++  +    L  E++   
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELV-FR 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKT-KESVLDKLWEINVK 123
           C V+++     +     + +  +D  V +    P  A   D L +      +   EI+  
Sbjct: 63  CDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAY 122

Query: 124 SSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
           S   L + A P M+ + S++V +S +   +      + G+ K +L    +  AA +  + 
Sbjct: 123 SLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEG 182

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            R N ++ G + T  A  +     +   +     L R  T   +    AFL SD +S IT
Sbjct: 183 IRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGIT 242

Query: 242 GETLVVAGG 250
           GE   V GG
Sbjct: 243 GEITYVDGG 251

Length = 261

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 54.0 bits (130), Expect = 2e-08
 Identities = 67/255 (26%), Positives = 110/255 (43%), Gaps = 27/255 (10%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLE--GASVVISS-RKQKNVDKAVEKLKALGIEVIGIIC 68
           GKVAVVT +    GLG AE LGL   GA+VV++      +    +++++A G + + +  
Sbjct: 12  GKVAVVTGA--AAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAG 69

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSI 126
            +S       L+   V   G +D+ V NA +     D  L    +   D +  ++++   
Sbjct: 70  DISQRATADELVATAVG-LGGLDIVVNNAGI---TRDRMLFNMSDEEWDAVIAVHLRGHF 125

Query: 127 LLMQDAAPHMQKGSS---------VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           LL ++AA + +  +          +V  SS AG   P   A YG  K  +  LT + A  
Sbjct: 126 LLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARA 185

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +     R N + P    T     + G DA      G   L    +  ++   + FLAS  
Sbjct: 186 LGRYGVRANAICPR-ARTAMTADVFG-DAPDVEAGGIDPL----SPEHVVPLVQFLASPA 239

Query: 237 ASYITGETLVVAGGM 251
           A+ + G+  +V G M
Sbjct: 240 AAEVNGQVFIVYGPM 254

Length = 306

>gnl|CDD|236173 PRK08177, PRK08177, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 23/193 (11%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A++  +++G+GLG+ +RL   G  V  + R      +    L+AL          V  
Sbjct: 2   RTALIIGASRGLGLGLVDRLLERGWQVTATVR---GPQQD-TALQALP--------GVHI 49

Query: 73  EQHRKN---LIDKTVEKYG--RIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSSI 126
           E+   N    +D+ +++    R D+  +NA +  P          + + +L+  N  + I
Sbjct: 50  EKLDMNDPASLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPI 109

Query: 127 LLMQDAAPHMQKGSSVV-FISSIAGY--QPPSA-MAMYGVTKTALLGLTKALAAEMA-PD 181
            L +     ++ G  V+ F+SS  G    P    M +Y  +K AL  +T++  AE+  P 
Sbjct: 110 RLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPT 169

Query: 182 TRVNCVAPGFVPT 194
             V  + PG+V T
Sbjct: 170 LTVLSMHPGWVKT 182

Length = 225

>gnl|CDD|166421 PLN02780, PLN02780, ketoreductase/ oxidoreductase

 Score = 53.3 bits (128), Expect = 2e-08
 Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 22/201 (10%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSR---KQKNVDKAVEKLKALGIEVIGIIC 68
           G  A+VT  T GIG G A +L  +G ++V+ +R   K K+V  +++  K    ++  ++ 
Sbjct: 53  GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQS-KYSKTQIKTVVV 111

Query: 69  HVSNEQHRKNLIDKTVEKYGR----IDVFVL--NAAVN-PYAADLLKTKESVLDKLWEIN 121
             S +      ID+ V++       +DV VL  N  V+ PYA    +  E +L  L ++N
Sbjct: 112 DFSGD------IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVN 165

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPS--AMAMYGVTKTALLGLTKALAAE 177
           V+ +  + Q   P M  +K  +++ I S A    PS    A+Y  TK  +   ++ L  E
Sbjct: 166 VEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVE 225

Query: 178 MAPD-TRVNCVAPGFVPTHFA 197
                  V C  P +V T  A
Sbjct: 226 YKKSGIDVQCQVPLYVATKMA 246

Length = 320

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 52.4 bits (126), Expect = 4e-08
 Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 17/251 (6%)

Query: 11  QGKVAVV--TASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGII 67
            GK  ++   A+ + I  G+A+     GA +  + +    + K VE L A LG  V G  
Sbjct: 9   AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGH- 66

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV----NPYAADLLKTKESVLDKLWEINVK 123
           C V++E     + +   +K+G++D FV++A      +      + T         +I+V 
Sbjct: 67  CDVTDEASIDAVFETLEKKWGKLD-FVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVY 125

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEMAP 180
           S   + Q A   M  G S++ ++    Y     M  Y   GV K AL    K LA ++ P
Sbjct: 126 SFTAVAQRAEKLMTDGGSILTLTY---YGAEKVMPHYNVMGVAKAALEASVKYLAVDLGP 182

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              RVN ++ G + T  A  +     + K  E    L R  T   +  +  +L SD +  
Sbjct: 183 KNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRG 242

Query: 240 ITGETLVVAGG 250
           +TGE   V  G
Sbjct: 243 VTGEVHHVDSG 253

Length = 272

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 52.5 bits (126), Expect = 4e-08
 Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 16/187 (8%)

Query: 17  VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHR 76
           +T S+ G+GL  A  L  +G  VV+ +R QK    A          +IG    +S+    
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---DLSSLAET 68

Query: 77  KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP-- 134
           + L D+ V   GR D  + NA +   +    KT ++ +  +  +NV +  +L        
Sbjct: 69  RKLADQ-VNAIGRFDAVIHNAGI--LSGPNRKTPDTGIPAMVAVNVLAPYVLTALIRRPK 125

Query: 135 -------HMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
                   M +G +          +  +    Y  +K  +L L  A+ A    D   N V
Sbjct: 126 RLIYLSSGMHRGGNASLDDIDWFNRGENDSPAYSDSKLHVLTLAAAV-ARRWKDVSSNAV 184

Query: 188 APGFVPT 194
            PG+VPT
Sbjct: 185 HPGWVPT 191

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 51.6 bits (124), Expect = 7e-08
 Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 14/191 (7%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI-GIICHVS 71
           K   VT +  GIG   A RL  +GA + ++ R    + + V   +ALG  V       +S
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDIS 60

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSIL 127
           +              +G +DV +  A ++ +      T + +  + W    ++N+   I 
Sbjct: 61  DYDAVAAFAADIHAAHGSMDVVMNIAGISAWG-----TVDRLTHEQWRRMVDVNLMGPIH 115

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           +++   P M    +G  +V +SS AG       A Y  +K  L GL++ L  ++A     
Sbjct: 116 VIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIG 175

Query: 184 VNCVAPGFVPT 194
           V+ V PG V T
Sbjct: 176 VSVVVPGAVKT 186

Length = 272

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 50.2 bits (120), Expect = 2e-07
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 16/203 (7%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGAS---VVISSRKQKNVDKAVEKLKALGIEVIGII-C 68
            V ++T  + GIGL +A RL  + +    V  + R  K   +  E   AL    +  +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEINVKSS 125
            V + +     +++  E    +DV V NA V    P  A       SV D    +NV  +
Sbjct: 61  DVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSEDAMASVFD----VNVFGT 114

Query: 126 ILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + ++Q   P M++  S  ++  SS+ G Q      +Y  +K AL GL ++LA ++ P + 
Sbjct: 115 VRMLQAFLPDMKRRGSGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNV 174

Query: 183 RVNCVAPGFVPTHFAQALLGNDA 205
            ++ +  G V T F + +LG+  
Sbjct: 175 HLSLIECGPVHTAFMEKVLGSPE 197

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 48.4 bits (115), Expect = 4e-07
 Identities = 28/94 (29%), Positives = 48/94 (51%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M  +  GKVA+VT    GIG   A  L  +GA V+++   Q++    VE++  LG E + 
Sbjct: 10  MKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALF 69

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV 99
           +   +  +   + +I  T+  + RID+   NA +
Sbjct: 70  VSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|181187 PRK07984, PRK07984, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.5 bits (118), Expect = 4e-07
 Identities = 58/249 (23%), Positives = 110/249 (44%), Gaps = 14/249 (5%)

Query: 12  GKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           GK  +VT  AS   I  G+A+ +  EGA +  + +  K   +  E    LG +++ + C 
Sbjct: 6   GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV-LPCD 64

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK-------TKESVLDKLWEINV 122
           V+ +     +  +  + + + D FV +    P   D L        T+E       +I+ 
Sbjct: 65  VAEDASIDAMFAELGKVWPKFDGFVHSIGFAP--GDQLDGDYVNAVTREG-FKIAHDISS 121

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
            S + + +     +  GS+++ +S +   +      + G+ K +L    + +A  M P+ 
Sbjct: 122 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 181

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN ++ G + T  A  +     +    E  T + R  T  ++  + AFL SD ++ I+
Sbjct: 182 VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS 241

Query: 242 GETLVVAGG 250
           GE + V GG
Sbjct: 242 GEVVHVDGG 250

Length = 262

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 49.4 bits (118), Expect = 5e-07
 Identities = 22/90 (24%), Positives = 46/90 (51%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
              GK  ++T ++ GIG   AE+    GA+VV  +R++  +D   +++   G + + + C
Sbjct: 37  DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPC 96

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAA 98
            +S+      L+    ++ G +D+ + NA 
Sbjct: 97  DLSDLDAVDALVADVEKRIGGVDILINNAG 126

Length = 293

>gnl|CDD|236124 PRK07889, PRK07889, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.2 bits (118), Expect = 5e-07
 Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 19/258 (7%)

Query: 6   MAKRFQGKVAVVTA--STQGIGLGVAERLGLEGASVVISS--RKQKNVDKAVEKLKALGI 61
           M    +GK  +VT   +   I   VA     +GA VV++   R  +  ++  ++L     
Sbjct: 1   MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPA- 59

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLW 118
            V+ +   V+NE+H  +L D+  E    +D  V +    P +A   + L      +    
Sbjct: 60  PVLEL--DVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATAL 117

Query: 119 EINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALA 175
            ++  S   L +   P M +G S+V +     +    A   Y   GV K AL    + LA
Sbjct: 118 HVSAYSLKSLAKALLPLMNEGGSIVGLD----FDATVAWPAYDWMGVAKAALESTNRYLA 173

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN-RLGTTGNMAAAIAFLA 233
            ++ P   RVN VA G + T  A+A+ G + + +  + +  L   +     +A A+  L 
Sbjct: 174 RDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALL 233

Query: 234 SDDASYITGETLVVAGGM 251
           SD     TGE + V GG 
Sbjct: 234 SDWFPATTGEIVHVDGGA 251

Length = 256

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 48.2 bits (115), Expect = 8e-07
 Identities = 52/195 (26%), Positives = 73/195 (37%), Gaps = 33/195 (16%)

Query: 17  VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS----- 71
           +T +  GIG   A      G  V +        D   + L AL  E+             
Sbjct: 5   ITGAASGIGRETALLFARNGWFVGLY-------DIDEDGLAALAAELGAENVVAGALDVT 57

Query: 72  -NEQHRKNLIDKTVEKYGRIDVFVLNAAVN--------PYAADLLKTKESVLDKLWEINV 122
                   L D      GR+D    NA V         P AA          D++ +INV
Sbjct: 58  DRAAWAAALADFAAATGGRLDALFNNAGVGRGGPFEDVPLAA---------HDRMVDINV 108

Query: 123 KSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           K  +     A P+++   G+ V+  +S +       +A+Y  TK A+ GLT+AL  E A 
Sbjct: 109 KGVLNGAYAALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWAR 168

Query: 181 -DTRVNCVAPGFVPT 194
              RV  V P FV T
Sbjct: 169 HGIRVADVWPWFVDT 183

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 47.1 bits (112), Expect = 2e-06
 Identities = 45/185 (24%), Positives = 80/185 (43%), Gaps = 10/185 (5%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           A+V  ++ GIG   A  L   G  V + +R+ +  ++ V+K++A G E +     V++  
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPD 72

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAA-VNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
             K+ + +  E  G I+V V  A          + T E    ++ +I++  +  L     
Sbjct: 73  SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEIST-EQFESQV-QIHLVGANRLATAVL 130

Query: 134 PHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM-APDTRVNCVAP 189
           P M   ++G  ++F+ S    +    M  YG  K  L  +   L  E+     R + V P
Sbjct: 131 PGMIERRRG-DLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHP 189

Query: 190 GFVPT 194
           G  PT
Sbjct: 190 G--PT 192

Length = 274

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.8 bits (108), Expect = 7e-06
 Identities = 49/186 (26%), Positives = 78/186 (41%), Gaps = 6/186 (3%)

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLN----AAVNPYAADLLKTKESVLDKLWEINVKSS 125
           V+N +   NL D   EK+G  D F+L+    A  N      + T          I+  S 
Sbjct: 67  VTNPKSISNLFDDIKEKWGSFD-FLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSL 125

Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           + L + A   M  G S+V ++     +      + GV K AL    K LA +M  +  RV
Sbjct: 126 LELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRV 185

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N ++ G + T  + A+     + K+      L R  T  ++  A  +L S+ +  +TGE 
Sbjct: 186 NAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVTGEI 245

Query: 245 LVVAGG 250
             V  G
Sbjct: 246 HYVDCG 251

Length = 260

>gnl|CDD|236229 PRK08303, PRK08303, short chain dehydrogenase; Provisional

 Score = 43.4 bits (103), Expect = 5e-05
 Identities = 28/99 (28%), Positives = 52/99 (52%), Gaps = 10/99 (10%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---SSRKQKN-------VDKAVEK 55
           M K  +GKVA+V  +T+G G G+A  LG  GA+V +   S+R +++       +++  E 
Sbjct: 2   MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAEL 61

Query: 56  LKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV 94
           + A G   I +       +  + L+++   + GR+D+ V
Sbjct: 62  VTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILV 100

Length = 305

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 43.1 bits (102), Expect = 5e-05
 Identities = 55/265 (20%), Positives = 95/265 (35%), Gaps = 58/265 (21%)

Query: 13  KVAVVTASTQGIGLGVAERL-----GLEGASVVISSRKQKNVDKAVEKLKAL----GIEV 63
           KV +VT +  G+GL + ERL          +++++ R  +  + A   L A      +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPY------AADL----------- 106
             ++  +SN         +  ++Y R+D   LNA + P        A             
Sbjct: 62  DYVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLFAVT 121

Query: 107 ----LKTKESVL--------DKL---WEINVKSSILLMQDAAPHM---QKGSSVVFISSI 148
                   E +L        D L   ++ NV     L+++  P +     GS +++ SS+
Sbjct: 122 NPTYKIQAEGLLSQGDKATEDGLGEVFQTNVFGHYYLIRELEPLLCRSDGGSQIIWTSSL 181

Query: 149 AG---------YQPPSAMAMYGVTKTALLGLTKAL---AAEMAPDTRVNCVAPGFVPTHF 196
                       Q     A Y  +K  +  L+ AL     ++   + V    PG   T+ 
Sbjct: 182 NASPKYFSLEDIQHLKGPAPYSSSKYLVDLLSLALNRKFNKLGVYSYVVH--PGICTTNL 239

Query: 197 AQALLGNDAVRKALEGKTLLNRLGT 221
              +L       AL    LL RLG+
Sbjct: 240 TYGILPPFTWTLALPLFYLLRRLGS 264

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 42.5 bits (100), Expect = 6e-05
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 6/148 (4%)

Query: 89  RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSS--VVFIS 146
           R DV V NAA+      L+    S +++    NV  +  L++ A   M+       + IS
Sbjct: 31  RRDVVVHNAAI-LDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKRLGRFILIS 89

Query: 147 SIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDA 205
           S+AG      +  Y  +K AL GL +  A+E   +      VA G              A
Sbjct: 90  SVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPV--A 147

Query: 206 VRKALEGKTLLNRLGTTGNMAAAIAFLA 233
             + L  +    R      +A A+    
Sbjct: 148 PEEILGNRRHGVRTMPPEEVARALLNAL 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 7e-05
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK---AVEKLKAL--GIEVIGI 66
           G+VAVVT +  G+G   A  L  +GA VV++ R   N+DK   A  ++ A   G +V   
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAHVVLAVR---NLDKGKAAAARITAATPGADVTLQ 72

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV 99
              +++    +   D     Y RID+ + NA V
Sbjct: 73  ELDLTSLASVRAAADALRAAYPRIDLLINNAGV 105

Length = 306

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 42.4 bits (100), Expect = 7e-05
 Identities = 58/230 (25%), Positives = 98/230 (42%), Gaps = 25/230 (10%)

Query: 17  VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQH 75
           VT +T G G  +  R   +G  V+ + R+Q+ +     +LK  LG  +      V N   
Sbjct: 5   VTGATAGFGECITRRFIQQGHKVIATGRRQERLQ----ELKDELGDNLYIAQLDVRNRAA 60

Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKT-KESVLDKLWEI----NVKSSILLMQ 130
            + ++     ++  IDV V NA +   A  L    K SV D  WE     N K  + + +
Sbjct: 61  IEEMLASLPAEWRNIDVLVNNAGL---ALGLEPAHKASVED--WETMIDTNNKGLVYMTR 115

Query: 131 DAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM-APDTRVNCV 187
              P M + +   ++ I S AG  P +   +YG TK  +   +  L  ++     RV  +
Sbjct: 116 AVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDI 175

Query: 188 APGFVP-THFAQALL-GNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
            PG V  T F+     G+D    K  +    L    T  +++ A+ ++A+
Sbjct: 176 EPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWWVAT 221

Length = 248

>gnl|CDD|235627 PRK05854, PRK05854, short chain dehydrogenase; Provisional

 Score = 42.7 bits (101), Expect = 8e-05
 Identities = 19/47 (40%), Positives = 29/47 (61%)

Query: 12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
          GK AVVT ++ G+GLG+A RL   GA V++  R +   + AV  ++ 
Sbjct: 14 GKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRT 60

Length = 313

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 42.2 bits (99), Expect = 9e-05
 Identities = 44/183 (24%), Positives = 76/183 (41%), Gaps = 11/183 (6%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
             ++T +T GIG  +A     +G  V+   R Q  +D+   +   +      +  H    
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH---P 59

Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
             +  L           ++++ NA    Y  D  K   +++ +++ +NV      ++   
Sbjct: 60  GTKAALSQLPFIP----ELWIFNAGDCEYMDDG-KVDATLMARVFNVNVLGVANCIEGIQ 114

Query: 134 PHMQKGSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           PH+  G  VV + SIA     P A A YG +K A+    + L  ++ P    V  V PGF
Sbjct: 115 PHLSCGHRVVIVGSIASELALPRAEA-YGASKAAVAYFARTLQLDLRPKGIEVVTVFPGF 173

Query: 192 VPT 194
           V T
Sbjct: 174 VAT 176

Length = 240

>gnl|CDD|235776 PRK06300, PRK06300, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.1 bits (99), Expect = 1e-04
 Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 12/181 (6%)

Query: 79  LIDKTVEKYGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQ 137
           + ++  + +G ID+ V + A +P  +  LL+T           +  S + L+    P M 
Sbjct: 109 VAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMN 168

Query: 138 KGSSVVFISSIAGYQPPSAMAMYG----VTKTALLGLTKALAAEMAP--DTRVNCVAPGF 191
            G S + ++ +A  +   A+  YG      K AL   TK LA E       RVN ++ G 
Sbjct: 169 PGGSTISLTYLASMR---AVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGP 225

Query: 192 VPTHFAQAL-LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
           + +   +A+      V    +   L   +     + AA AFL S  AS ITGETL V  G
Sbjct: 226 LASRAGKAIGFIERMVDYYQDWAPLPEPM-EAEQVGAAAAFLVSPLASAITGETLYVDHG 284

Query: 251 M 251
            
Sbjct: 285 A 285

Length = 299

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 42.4 bits (100), Expect = 1e-04
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERL-GLEGASVVISSRKQKNVDK-----AVEKLKALGIEVIG 65
           G V +VT    GIG  +A  L    GA +V+  R     ++      +  L+ALG  V+ 
Sbjct: 205 GGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVLY 264

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
           I   V++    + L++K  E+YG ID  +  A V   A    KT E    
Sbjct: 265 ISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVLRDALLAQKTAEDFEA 314

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|233441 TIGR01500, sepiapter_red, sepiapterin reductase

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 14  VAVVTASTQGIGLGVAE----RLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGII 67
           V +VT +++G G  +A+     L   G+ +V+S+R  + + +   ++ A   G+ V+ + 
Sbjct: 2   VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVS 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRID-----VFVLNAA----VNPYAADLLKTKESVLDKLW 118
             +  E   + L+ K + +  R       + + NA     V+    DL  + +  +   W
Sbjct: 62  LDLGAEAGLEQLL-KALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQ--VQNYW 118

Query: 119 EINVKSSI----LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
            +N+ S +     +++          +VV ISS+   QP    A+Y   K A   L + L
Sbjct: 119 ALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVL 178

Query: 175 AAE-MAPDTRVNCVAPGFVPTHFAQ 198
           A E   P+ RV   APG + T   Q
Sbjct: 179 ALEEKNPNVRVLNYAPGVLDTDMQQ 203

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. Length = 256

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 41.4 bits (97), Expect = 2e-04
 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 2/90 (2%)

Query: 12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL--KALGIEVIGIICH 69
          GKV ++T +  GIG   A    L GA V+++ R       AV ++  +     V  +   
Sbjct: 1  GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 70 VSNEQHRKNLIDKTVEKYGRIDVFVLNAAV 99
          +++ +  +   +    K   + V V NAAV
Sbjct: 61 LASLRSVQRFAEAFKAKNSPLHVLVCNAAV 90

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|180789 PRK06997, PRK06997, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 60/257 (23%), Positives = 105/257 (40%), Gaps = 17/257 (6%)

Query: 12  GKVAVVTA--STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           GK  ++T   S + I  G+A+    EGA +  +    +  D+  E     G +++   C 
Sbjct: 6   GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLV-FPCD 64

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP---YAADLLK--TKESVLDKLWEINVKS 124
           V++++    L     + +  +D  V +    P    A D L   ++E+      +I+  S
Sbjct: 65  VASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSREN-FRIAHDISAYS 123

Query: 125 SILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
              L + A P +   +S++ +S +   +        G+ K +L    + LA  + P   R
Sbjct: 124 FPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIR 183

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            N ++ G + T  A  +     +   +E    L R  T   +    AFL SD AS +TGE
Sbjct: 184 ANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGVTGE 243

Query: 244 TL-------VVAGGMAS 253
                     V GGMA 
Sbjct: 244 ITHVDSGFNAVVGGMAG 260

Length = 260

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 6/79 (7%)

Query: 142 VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL 200
           VV +SS+ G  P  A   Y  +K A+   + +L  E+ P   +V+ + PG     F   +
Sbjct: 132 VVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSLRRELQPWGVKVSIIEPGN----FKTGI 187

Query: 201 LGNDAVRKALEGKTLLNRL 219
            GN  + +    K L  RL
Sbjct: 188 TGNSELWEKQA-KKLWERL 205

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 40.8 bits (96), Expect = 3e-04
 Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +  ++T  + GIG   A  L  +G  V  + RK+++    V  L+A G+E        + 
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEED----VAALEAEGLEA--FQLDYAE 58

Query: 73  EQHRKNLIDKTVEKY-GRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
            +    L+ + +E   GR+D    N A   P A + L T+   L   +E N      L +
Sbjct: 59  PESIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTE--ALRAQFEANFFGWHDLTR 116

Query: 131 DAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA-PDTRVNCV 187
              P M+K     +V  SSI G  P      Y  +K A+ GL+  L  E+      V+ +
Sbjct: 117 RVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLI 176

Query: 188 APGFVPTHFAQ 198
            PG + T F  
Sbjct: 177 EPGPIETRFRA 187

Length = 277

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 39.3 bits (92), Expect = 0.001
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 24/98 (24%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHV 70
           GK A+VT    G+GL     L   GA V++ +R+    D A E L  + G+EV+ +    
Sbjct: 26  GKTAIVTGGYSGLGLETTRALAQAGAHVIVPARR---PDVAREALAGIDGVEVVML---- 78

Query: 71  SNEQHRKNL-----IDKTVEKYG----RIDVFVLNAAV 99
                  +L     +    E++     RID+ + NA V
Sbjct: 79  -------DLADLESVRAFAERFLDSGRRIDILINNAGV 109

Length = 315

>gnl|CDD|236016 PRK07424, PRK07424, bifunctional sterol desaturase/short chain dehydrogenase; Validated

 Score = 38.1 bits (89), Expect = 0.003
 Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 14/121 (11%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GK   VT ++  +G  + + L  +GA VV  +     +   +   + L ++   +   
Sbjct: 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEING-EDLPVKT--LHWQ 232

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V  E     L++K       +D+ ++N  +N +     +T E++ +K +E+N  S+  LM
Sbjct: 233 VGQEAALAELLEK-------VDILIINHGINVHGE---RTPEAI-NKSYEVNTFSAWRLM 281

Query: 130 Q 130
           +
Sbjct: 282 E 282

Length = 406

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 37.1 bits (86), Expect = 0.003
 Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 23/210 (10%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV--IGIICHVSN 72
           A++  +T GIG  +A  L   G  +++S R           L  L  EV  +     V+ 
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAG-------ALAGLAAEVGALARPADVAA 53

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           E     L     ++ G +D+ V  AA       L +TK +   ++ + N+  + L+++ A
Sbjct: 54  ELEVWALA----QELGPLDLLVY-AAGAILGKPLARTKPAAWRRILDANLTGAALVLKHA 108

Query: 133 APHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFV 192
              +  G+ +VF+ +         ++ Y   K AL    +    E+    R+  V P  V
Sbjct: 109 LALLAAGARLVFLGAYPELVMLPGLSAYAAAKAALEAYVEVARKEVR-GLRLTLVRPPAV 167

Query: 193 PTHFAQALLG--------NDAVRKALEGKT 214
            T                 D     LE   
Sbjct: 168 DTGLWAPPGRLPKGALSPEDVAAAILEAHQ 197

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 37.2 bits (87), Expect = 0.004
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 137 QKGSSVVFISSIAGYQP-PSAMAMYGVTKTALLGLTKALAAEMA-PDTRVNCVAPGFVPT 194
           Q    +V ISS++  +  P   A Y  +K  +  L + L AE+A    +V+ + PG++ +
Sbjct: 130 QGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRS 189

Length = 248

>gnl|CDD|178331 PLN02730, PLN02730, enoyl-[acyl-carrier-protein] reductase

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 17/181 (9%)

Query: 82  KTVEK-YGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG 139
           ++V+  +G ID+ V + A  P     LL+T           +  S + L+Q   P M  G
Sbjct: 112 ESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPG 171

Query: 140 SSVVFISSIAGYQPPSAMAMYG----VTKTALLGLTKALAAEMAP--DTRVNCVAPGFVP 193
            + + ++ IA  +    +  YG      K AL   T+ LA E       RVN ++ G + 
Sbjct: 172 GASISLTYIASER---IIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLG 228

Query: 194 THFAQAL-LGNDAVRKALEGKTLLNRLGT--TGNMAAAIAFLASDDASYITGETLVVAGG 250
           +  A+A+   +D +  +     L   L     GN AA   FLAS  AS ITG T+ V  G
Sbjct: 229 SRAAKAIGFIDDMIEYSYANAPLQKELTADEVGNAAA---FLASPLASAITGATIYVDNG 285

Query: 251 M 251
           +
Sbjct: 286 L 286

Length = 303

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	255
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK08264	238	short chain dehydrogenase; Validated	99.98
PRK09291	257	short chain dehydrogenase; Provisional	99.98
PRK08177	225	short chain dehydrogenase; Provisional	99.97
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.95
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.95
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.94
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.92
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.92
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.92
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.92
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
PLN02653	340	GDP-mannose 4,6-dehydratase	99.9
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.89
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.89
PRK06720	169	hypothetical protein; Provisional	99.89
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.88
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.88
PLN02650	351	dihydroflavonol-4-reductase	99.87
PLN02572	442	UDP-sulfoquinovose synthase	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.86
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.86
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.86
PLN00198	338	anthocyanidin reductase; Provisional	99.86
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.86
PLN02583	297	cinnamoyl-CoA reductase	99.86
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.85
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.85
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.85
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.85
PLN02240	352	UDP-glucose 4-epimerase	99.85
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.83
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.83
PLN02686	367	cinnamoyl-CoA reductase	99.83
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.82
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.8
PLN02427	386	UDP-apiose/xylose synthase	99.8
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.79
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.79
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.79
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.78
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.77
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.76
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.76
PLN02260	668	probable rhamnose biosynthetic enzyme	99.76
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.74
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.73
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.72
PLN02206	442	UDP-glucuronate decarboxylase	99.72
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.72
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.72
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.71
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.7
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.7
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.69
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.68
CHL00194	317	ycf39 Ycf39; Provisional	99.66
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.66
PRK07201	657	short chain dehydrogenase; Provisional	99.63
PLN02996	491	fatty acyl-CoA reductase	99.63
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.62
PRK05865	854	hypothetical protein; Provisional	99.55
PLN02778	298	3,5-epimerase/4-reductase	99.54
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.52
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.51
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.5
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.5
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.48
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.46
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.46
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.44
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.39
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.38
PLN02260	668	probable rhamnose biosynthetic enzyme	99.35
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.35
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.33
PRK12320	699	hypothetical protein; Provisional	99.32
PLN02503	605	fatty acyl-CoA reductase 2	99.32
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.31
PLN00016	378	RNA-binding protein; Provisional	99.3
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.28
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.27
PRK08309	177	short chain dehydrogenase; Provisional	99.19
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.07
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	98.97
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.97
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.88
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.88
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.88
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.88
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.85
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.79
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.74
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.67
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.65
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.54
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.53
PLN00106	323	malate dehydrogenase	98.48
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.4
PRK09620	229	hypothetical protein; Provisional	98.4
PTZ00325	321	malate dehydrogenase; Provisional	98.3
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.3
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	98.28
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.28
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	98.28
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	98.18
COG2910	211	Putative NADH-flavin reductase [General function p	98.17
PRK14982	340	acyl-ACP reductase; Provisional	98.12
KOG2733	423	consensus Uncharacterized membrane protein [Functi	98.08
KOG2774	366	consensus NAD dependent epimerase [General functio	98.07
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.93
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.92
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.92
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.91
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.87
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.84
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.82
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.78
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	97.76
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.76
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.73
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.72
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.71
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	97.68
PRK14968	188	putative methyltransferase; Provisional	97.67
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	97.6
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	97.6
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	97.59
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.56
COG3268	382	Uncharacterized conserved protein [Function unknow	97.56
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	97.53
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	97.52
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	97.49
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	97.49
PRK06849	389	hypothetical protein; Provisional	97.48
PRK05086	312	malate dehydrogenase; Provisional	97.47
PRK15116	268	sulfur acceptor protein CsdL; Provisional	97.44
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	97.41
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	97.4
PRK08306	296	dipicolinate synthase subunit A; Reviewed	97.4
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	97.39
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	97.39
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	97.37
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.36
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.36
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.33
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	97.29
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	97.28
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	97.22
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	97.21
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	97.2
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	97.2
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.19
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	97.19
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	97.14
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	97.13
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	97.12
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	97.12
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	97.12
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	97.11
COG2130	340	Putative NADP-dependent oxidoreductases [General f	97.09
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	97.08
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	97.08
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	97.06
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.06
PLN00112	444	malate dehydrogenase (NADP); Provisional	97.05
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	97.03
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	97.02
PTZ00117	319	malate dehydrogenase; Provisional	97.01
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	97.0
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.98
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	96.97
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.96
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	96.96
TIGR00537	179	hemK_rel_arch HemK-related putative methylase. The	96.95
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	96.94
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.92
PRK05442	326	malate dehydrogenase; Provisional	96.91
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	96.91
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	96.9
PRK04148	134	hypothetical protein; Provisional	96.89
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	96.89
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.88
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.87
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	96.84
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	96.81
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	96.79
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	96.79
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.78
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.77
TIGR01757	387	Malate-DH_plant malate dehydrogenase, NADP-depende	96.77
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	96.75
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	96.75
PRK14967	223	putative methyltransferase; Provisional	96.74
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	96.74
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.74
cd00300	300	LDH_like L-lactate dehydrogenase-like enzymes. Mem	96.7
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	96.7
PRK09496	453	trkA potassium transporter peripheral membrane com	96.69
PLN02928	347	oxidoreductase family protein	96.67
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	96.66
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.64
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	96.64
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	96.62
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	96.61
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.61
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	96.59
PTZ00075	476	Adenosylhomocysteinase; Provisional	96.59
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.59
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.57
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.56
PLN00203	519	glutamyl-tRNA reductase	96.56
PF02737	180	3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind	96.55
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	96.54
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.54
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.53
PLN02602	350	lactate dehydrogenase	96.52
cd01485	198	E1-1_like Ubiquitin activating enzyme (E1), repeat	96.52
cd05295	452	MDH_like Malate dehydrogenase-like. These MDH-like	96.52
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	96.51
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.5
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	96.5
PRK08655	437	prephenate dehydrogenase; Provisional	96.49
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.48
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	96.48
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	96.47
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.46
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	96.46
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	96.45
PTZ00082	321	L-lactate dehydrogenase; Provisional	96.43
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	96.42
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	96.41
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	96.4
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	96.39
PRK08223	287	hypothetical protein; Validated	96.39
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	96.39
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	96.37
PLN02494	477	adenosylhomocysteinase	96.35
PRK05600	370	thiamine biosynthesis protein ThiF; Validated	96.35
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.35
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.34
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	96.34
PLN02586	360	probable cinnamyl alcohol dehydrogenase	96.33
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	96.31
PLN02178	375	cinnamyl-alcohol dehydrogenase	96.28
PRK09496	453	trkA potassium transporter peripheral membrane com	96.25
PRK11207	197	tellurite resistance protein TehB; Provisional	96.2
PRK06223	307	malate dehydrogenase; Reviewed	96.17
PRK15128	396	23S rRNA m(5)C1962 methyltransferase; Provisional	96.16
PLN02827	378	Alcohol dehydrogenase-like	96.12
PRK06719	157	precorrin-2 dehydrogenase; Validated	96.11
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	96.08
COG2263	198	Predicted RNA methylase [Translation, ribosomal st	96.08
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	96.07
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	96.07
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	96.06
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	96.06
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	96.04
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	96.03
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.02
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	96.02
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	96.02
PLN02740	381	Alcohol dehydrogenase-like	96.0
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.98
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	95.97
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	95.97
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	95.93
PRK14851	679	hypothetical protein; Provisional	95.93
PRK07574	385	formate dehydrogenase; Provisional	95.92
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.91
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	95.91
PRK13256	226	thiopurine S-methyltransferase; Reviewed	95.9
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	95.88
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	95.88
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.87
PRK07877	722	hypothetical protein; Provisional	95.86
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.86
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	95.84
KOG3191	209	consensus Predicted N6-DNA-methyltransferase [Tran	95.81
PRK07819	286	3-hydroxybutyryl-CoA dehydrogenase; Validated	95.8
PLN02514	357	cinnamyl-alcohol dehydrogenase	95.8
PRK12480	330	D-lactate dehydrogenase; Provisional	95.77
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.76
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.75
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	95.74
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	95.74
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	95.7
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	95.69
PRK08328	231	hypothetical protein; Provisional	95.68
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.67
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	95.66

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-49  Score=328.24  Aligned_cols=245  Identities=23%  Similarity=0.317  Sum_probs=214.8

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |...+++|+++||||+  +|||++++++|+++|++|++++|+. ..++..+++.  +.++.+++||++++++++++++++
T Consensus         1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~   77 (252)
T PRK06079          1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKSLQKLV--DEEDLLVECDVASDESIERAFATI   77 (252)
T ss_pred             CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHHHHhhc--cCceeEEeCCCCCHHHHHHHHHHH
Confidence            3445789999999999  8999999999999999999999984 4444444442  246788999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+++|++|++|||||....   ..++.+.+.++|++.+++|+.+++.+++++.|+|+++++||+++|..+..+.+++..|
T Consensus        78 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y  157 (252)
T PRK06079         78 KERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVM  157 (252)
T ss_pred             HHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhh
Confidence            9999999999999997642   2577889999999999999999999999999999878899999999998888899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|||+.+.||+++.+.+
T Consensus       158 ~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~  237 (252)
T PRK06079        158 GIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEEVGNTAAFLLSDLSTG  237 (252)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHHHHHHHHHHhCccccc
Confidence            99999999999999999998 99999999999999986544333344455566778899999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||.++
T Consensus       238 itG~~i~vdgg~~~  251 (252)
T PRK06079        238 VTGDIIYVDKGVHL  251 (252)
T ss_pred             ccccEEEeCCceec
Confidence            99999999999753

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=4.7e-50  Score=304.68  Aligned_cols=242  Identities=32%  Similarity=0.493  Sum_probs=223.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++.|.++||||++|||++++..|+++|++|+.++++.+..+++...+...+ +-..+.||++++++++..+++..+.+
T Consensus        10 ~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~-~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen   10 QRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYG-DHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCC-ccceeeeccCcHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999998888888876654 45568999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc--c--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM--Q--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l--~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      |++++||||||+.. ...+...+.++|++.+.+|+.|.|.+.|++...|  .  ...+||++||+.+..+..++..|+++
T Consensus        89 g~psvlVncAGItr-D~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAs  167 (256)
T KOG1200|consen   89 GTPSVLVNCAGITR-DGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAAS  167 (256)
T ss_pred             CCCcEEEEcCcccc-ccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhh
Confidence            99999999999986 7888999999999999999999999999999875  2  23499999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+++.+|+|+.++|+++ +||||+|.||++.|||+...  ++...+.+...+|+++++++||||+.+.||+|+.++|+||
T Consensus       168 K~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m--p~~v~~ki~~~iPmgr~G~~EevA~~V~fLAS~~ssYiTG  245 (256)
T KOG1200|consen  168 KGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM--PPKVLDKILGMIPMGRLGEAEEVANLVLFLASDASSYITG  245 (256)
T ss_pred             cCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc--CHHHHHHHHccCCccccCCHHHHHHHHHHHhccccccccc
Confidence            99999999999999999 99999999999999999887  4556778889999999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.++||..+
T Consensus       246 ~t~evtGGl~m  256 (256)
T KOG1200|consen  246 TTLEVTGGLAM  256 (256)
T ss_pred             eeEEEeccccC
Confidence            99999999754

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.2e-49  Score=329.57  Aligned_cols=243  Identities=22%  Similarity=0.277  Sum_probs=208.8

Q ss_pred             cCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++|++|||||++  |||+++|++|+++|++|++++|+.+..++..+..++.+. ...++||++|+++++++++++.++
T Consensus         4 ~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~-~~~~~~Dv~d~~~v~~~~~~~~~~   82 (271)
T PRK06505          4 LMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGS-DFVLPCDVEDIASVDAVFEALEKK   82 (271)
T ss_pred             ccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCC-ceEEeCCCCCHHHHHHHHHHHHHH
Confidence            36799999999997  999999999999999999999986544333322233343 357899999999999999999999


Q ss_pred             cCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|+||||||....   ..++.+.+.++|++++++|+.+++.++|++.|+|+++++||++||..+..+.+++..|++|
T Consensus        83 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~as  162 (271)
T PRK06505         83 WGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVA  162 (271)
T ss_pred             hCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhh
Confidence            9999999999997542   1467789999999999999999999999999999877899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+++++.|+++ |||||+|+||+++|++..................|.+++.+|+|||+.++||+++.+.++||
T Consensus       163 KaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peeva~~~~fL~s~~~~~itG  242 (271)
T PRK06505        163 KAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDEVGGSALYLLSDLSSGVTG  242 (271)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHHHHHHHHHHhCccccccCc
Confidence            99999999999999999 99999999999999986433222222334445678889999999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||..
T Consensus       243 ~~i~vdgG~~  252 (271)
T PRK06505        243 EIHFVDSGYN  252 (271)
T ss_pred             eEEeecCCcc
Confidence            9999999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-49  Score=327.30  Aligned_cols=244  Identities=27%  Similarity=0.437  Sum_probs=218.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++.+|++++++++++++++. ++
T Consensus         5 ~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~~   83 (263)
T PRK08339          5 DLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-NI   83 (263)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-hh
Confidence            468999999999999999999999999999999999999988888887654 5678899999999999999999985 58


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|++|||+|... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+++|+
T Consensus        84 g~iD~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKa  162 (263)
T PRK08339         84 GEPDIFFFSTGGPK-PGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRI  162 (263)
T ss_pred             CCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHH
Confidence            99999999999764 56788999999999999999999999999999995  3479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      |+++|+++++.|+++ |||||+|+||+++|++......         .++..+......|.+++.+|+|||+.+.||+++
T Consensus       163 al~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~s~  242 (263)
T PRK08339        163 SMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPEEIGYLVAFLASD  242 (263)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCcCHHHHHHHHHHHhcc
Confidence            999999999999999 9999999999999998654311         123344556677899999999999999999999


Q ss_pred             CCCCccccEEeeCCCccCC
Q 025259          236 DASYITGETLVVAGGMASR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+.++||+++.+|||...+
T Consensus       243 ~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        243 LGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             hhcCccCceEEECCCcccc
Confidence            9999999999999998764

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.3e-48  Score=323.90  Aligned_cols=243  Identities=24%  Similarity=0.277  Sum_probs=210.5

Q ss_pred             cCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++|+++||||++  |||++++++|+++|++|++++|+. ..++..+++.+. +. ..+++||++|+++++++++++.+
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~-~~~~~~Dv~~~~~v~~~~~~~~~   82 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEEIGC-NFVSELDVTNPKSISNLFDDIKE   82 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHhcCC-ceEEEccCCCHHHHHHHHHHHHH
Confidence            47899999999997  999999999999999999999874 344444555443 33 34678999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|+||||+|....   ..++.+.+.++|++.+++|+.+++.+++++.|+|+++++||++||..+..+.+++..|++
T Consensus        83 ~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~a  162 (260)
T PRK06603         83 KWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGV  162 (260)
T ss_pred             HcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhh
Confidence            99999999999997531   246778999999999999999999999999999987899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+|+++|+++++.|+++ +||||+|+||+++|++.......++..+......|.+++.+|+|+|+++.||+++.+.++|
T Consensus       163 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~it  242 (260)
T PRK06603        163 AKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQEDVGGAAVYLFSELSKGVT  242 (260)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCcccccCc
Confidence            999999999999999998 9999999999999998643322223334455567889999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||+..
T Consensus       243 G~~i~vdgG~~~  254 (260)
T PRK06603        243 GEIHYVDCGYNI  254 (260)
T ss_pred             ceEEEeCCcccc
Confidence            999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-48  Score=323.55  Aligned_cols=244  Identities=31%  Similarity=0.484  Sum_probs=217.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+..  ++..++++..+.++.++.+|++++++++++++++.+.+
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVM   81 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999988643  44555666667789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||... ..++.+.++++|++++++|+.+++.+++++.|+|++   .++||++||..+..+.++...|++||
T Consensus        82 g~iD~lv~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         82 GHIDILINNAGIIR-RQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            99999999999865 667888999999999999999999999999998852   47999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+++ |||||+|+||+++|++.......+...+......|.+++.+|+|||+++.||+++.+.+++|+
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~~~~~L~s~~~~~~~G~  240 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYVTGY  240 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            9999999999999998 999999999999999876543333333445566788999999999999999999999999999


Q ss_pred             EEeeCCCccCC
Q 025259          244 TLVVAGGMASR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      +|.+|||...|
T Consensus       241 ~i~vdgg~~~~  251 (251)
T PRK12481        241 TLAVDGGWLAR  251 (251)
T ss_pred             eEEECCCEecC
Confidence            99999998765

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.7e-48  Score=326.79  Aligned_cols=243  Identities=26%  Similarity=0.315  Sum_probs=207.4

Q ss_pred             cCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-HHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|+.+. ++..+++ ++.+.+ .+++||++|+++++++++++.+
T Consensus         2 ~l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~-~~~~~~~~~~~~~~-~~~~~Dv~d~~~v~~~~~~i~~   79 (274)
T PRK08415          2 IMKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL-KKRVEPIAQELGSD-YVYELDVSKPEHFKSLAESLKK   79 (274)
T ss_pred             ccCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH-HHHHHHHHHhcCCc-eEEEecCCCHHHHHHHHHHHHH
Confidence            4579999999997  899999999999999999999998632 2223333 233434 6789999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|++|||||....   ..++.+.+.++|++++++|+.+++.++++++|+|+++++||++||..+..+.+.+..|++
T Consensus        80 ~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~a  159 (274)
T PRK08415         80 DLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGV  159 (274)
T ss_pred             HcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhh
Confidence            99999999999997532   256788999999999999999999999999999988899999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+|+++|+++++.|+++ |||||+|+||+++|++..................|.+++.+|+|||+++.||+++.+.++|
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~pedva~~v~fL~s~~~~~it  239 (274)
T PRK08415        160 AKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEEVGNSGMYLLSDLSSGVT  239 (274)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHHHHHHHHHHhhhhhhccc
Confidence            999999999999999998 9999999999999987543211111122223456889999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||...
T Consensus       240 G~~i~vdGG~~~  251 (274)
T PRK08415        240 GEIHYVDAGYNI  251 (274)
T ss_pred             ccEEEEcCcccc
Confidence            999999999753

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=2.2e-48  Score=323.65  Aligned_cols=245  Identities=29%  Similarity=0.375  Sum_probs=213.3

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .++++|+++||||+  +|||++++++|+++|++|++++|+.+  ..++..+++.+.+.++.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            45789999999986  89999999999999999998876543  344555666555556778999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+++|++|++|||||....   ..++.+.+.++|++++++|+.+++.+++++.|+|+++++||++||..+..+.+++..|
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y  161 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVM  161 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchh
Confidence            9999999999999997531   3578889999999999999999999999999999878999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+++.+.||+++.+.+
T Consensus       162 ~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~fl~s~~~~~  241 (258)
T PRK07370        162 GVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQTEVGNTAAFLLSDLASG  241 (258)
T ss_pred             hHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCHHHHHHHHHHHhChhhcc
Confidence            99999999999999999998 99999999999999986543222233344445678899999999999999999999999


Q ss_pred             ccccEEeeCCCcc
Q 025259          240 ITGETLVVAGGMA  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      +||+++.+|||..
T Consensus       242 ~tG~~i~vdgg~~  254 (258)
T PRK07370        242 ITGQTIYVDAGYC  254 (258)
T ss_pred             ccCcEEEECCccc
Confidence            9999999999975

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.5e-48  Score=321.08  Aligned_cols=245  Identities=25%  Similarity=0.337  Sum_probs=212.2

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |+.++++|+++||||+  +|||+++|++|+++|++|++++|+.   +.++++.++++  +.++.+++||++|++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~   78 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLE--GQESLLLPCDVTSDEEITACF   78 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcC--CCceEEEecCCCCHHHHHHHH
Confidence            4567899999999997  8999999999999999999998764   33444444332  457888999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~  157 (255)
                      +++.+++|++|++|||||....   ..++.+.+.++|++.+++|+.+++.+.++++|+|+++++||++||..+..+.+++
T Consensus        79 ~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  158 (257)
T PRK08594         79 ETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNY  158 (257)
T ss_pred             HHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCC
Confidence            9999999999999999997531   2567788999999999999999999999999999878999999999999888899


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ..|++||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+|+.+.||+++.
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~~l~s~~  238 (257)
T PRK08594        159 NVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEEVGDTAAFLFSDL  238 (257)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHHHHHHHHHHcCcc
Confidence            99999999999999999999998 99999999999999976433221222334445668889999999999999999999


Q ss_pred             CCCccccEEeeCCCcc
Q 025259          237 ASYITGETLVVAGGMA  252 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~  252 (255)
                      +.++||+++.+|||+.
T Consensus       239 ~~~~tG~~~~~dgg~~  254 (257)
T PRK08594        239 SRGVTGENIHVDSGYH  254 (257)
T ss_pred             cccccceEEEECCchh
Confidence            9999999999999975

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.6e-48  Score=320.95  Aligned_cols=246  Identities=22%  Similarity=0.270  Sum_probs=209.5

Q ss_pred             cccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |..+++|+++||||  ++|||+++|++|+++|++|++++|+. ..++..+++.........++||++|+++++++++++.
T Consensus         1 ~~~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   79 (261)
T PRK08690          1 MGFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLG   79 (261)
T ss_pred             CCccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHH
Confidence            34588999999997  67999999999999999999988864 3344444554433345678999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCC---CC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChh
Q 025259           85 EKYGRIDVFVLNAAVNPYA---AD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +++|++|++|||||+....   .+ +.+.+.++|++++++|+.+++.+.|++.|+|++ .++||++||..+..+.+++..
T Consensus        80 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         80 KHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             HHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCccc
Confidence            9999999999999986421   12 356788999999999999999999999998853 479999999999988899999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++|+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|||+.+.||+++.+.
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~l~s~~~~  239 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSS  239 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            999999999999999999999 9999999999999998654432233344455667899999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++||++|.+|||+..
T Consensus       240 ~~tG~~i~vdgG~~~  254 (261)
T PRK08690        240 GITGEITYVDGGYSI  254 (261)
T ss_pred             CcceeEEEEcCCccc
Confidence            999999999999764

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.4e-47  Score=317.48  Aligned_cols=244  Identities=26%  Similarity=0.333  Sum_probs=210.2

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||+  +|||++++++|+++|++|++++|+.+..+. .+++.+......++.||++++++++++++++.+
T Consensus         6 ~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   84 (258)
T PRK07533          6 LPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPY-VEPLAEELDAPIFLPLDVREPGQLEAVFARIAE   84 (258)
T ss_pred             cccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHH-HHHHHHhhccceEEecCcCCHHHHHHHHHHHHH
Confidence            45789999999998  599999999999999999999998644322 222322212356789999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|++|||||....   ..++.+.+.++|++++++|+.+++.++++++|+|+++++||++||..+..+.+.+..|++
T Consensus        85 ~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~a  164 (258)
T PRK07533         85 EWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGP  164 (258)
T ss_pred             HcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHH
Confidence            99999999999997532   256778999999999999999999999999999987789999999998888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+|+.++||+++++.+++
T Consensus       165 sKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~L~s~~~~~it  244 (258)
T PRK07533        165 VKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDDVGAVAAFLASDAARRLT  244 (258)
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhChhhcccc
Confidence            999999999999999998 9999999999999998754432233334455667889999999999999999999999999


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+.+|||..
T Consensus       245 G~~i~vdgg~~  255 (258)
T PRK07533        245 GNTLYIDGGYH  255 (258)
T ss_pred             CcEEeeCCccc
Confidence            99999999975

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-47  Score=317.40  Aligned_cols=247  Identities=29%  Similarity=0.459  Sum_probs=220.8

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH--cCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA--LGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |+.++++|+++||||++|||++++++|+++|++|++++|+++.+++..++++.  .+.++.+++||++++++++++++++
T Consensus         1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   80 (260)
T PRK07063          1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAA   80 (260)
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999988888876  4567889999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .++++++|++|||||... ..+..+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        81 ~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  159 (260)
T PRK07063         81 EEAFGPLDVLVNNAGINV-FADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYP  159 (260)
T ss_pred             HHHhCCCcEEEECCCcCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHH
Confidence            999999999999999764 55667889999999999999999999999999985  347999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---CH-HHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---ND-AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++|+++++|+++++.|+++ |||||+|+||+++|++......   .+ ..........|.+++.+|+|+|+.+.||+++.
T Consensus       160 ~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~va~~~~fl~s~~  239 (260)
T PRK07063        160 VAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEEVAMTAVFLASDE  239 (260)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999999998 9999999999999998754321   11 22334456678899999999999999999999


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      +.++||+.+.+|||.+.
T Consensus       240 ~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        240 APFINATCITIDGGRSV  256 (260)
T ss_pred             ccccCCcEEEECCCeee
Confidence            99999999999999764

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.7e-47  Score=317.57  Aligned_cols=242  Identities=21%  Similarity=0.300  Sum_probs=208.9

Q ss_pred             CCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++|+++||||++  |||++++++|+++|++|++++|+ +.+++..+++.....+..++.||++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6799999999986  99999999999999999999987 34455556665544456788999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCC----CcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAA----DLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      |++|++|||||......    ++.+.+.++|++++++|+.+++.+.+++.|.++++++||++||..+..+.+++..|++|
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~as  162 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLA  162 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHH
Confidence            99999999999753211    15567899999999999999999999999988777899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+++ +||||+|+||+++|++...........+......|.+++.+|+||++.+.||+++.+.+++|
T Consensus       163 Kaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~L~s~~~~~itG  242 (262)
T PRK07984        163 KASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGISG  242 (262)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHHHHHHHHHHHcCcccccccC
Confidence            99999999999999999 99999999999999875433222223334455678899999999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||..
T Consensus       243 ~~i~vdgg~~  252 (262)
T PRK07984        243 EVVHVDGGFS  252 (262)
T ss_pred             cEEEECCCcc
Confidence            9999999965

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.6e-47  Score=315.53  Aligned_cols=245  Identities=32%  Similarity=0.481  Sum_probs=221.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+++++++..+++++.+.++.++.||++++++++++++++.+++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            46789999999999999999999999999999999999999998888888877789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y~~sK  164 (255)
                      +++|++|||||......++.+.+.++|++++++|+.+++.++++++|.|+  +.++||++||..+. .+.+++..|++||
T Consensus        82 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (254)
T PRK07478         82 GGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASK  161 (254)
T ss_pred             CCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHH
Confidence            99999999999864356788899999999999999999999999999885  34789999999886 5778899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++++++++.|+++ +|+|++|+||+++|++.......+..........+.+++.+|+|+|+.++||+++.+.+++|+
T Consensus       162 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  241 (254)
T PRK07478        162 AGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQAALFLASDAASFVTGT  241 (254)
T ss_pred             HHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCC
Confidence            9999999999999998 999999999999999876554344444455566678899999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      ++.+|||..
T Consensus       242 ~~~~dgg~~  250 (254)
T PRK07478        242 ALLVDGGVS  250 (254)
T ss_pred             eEEeCCchh
Confidence            999999976

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.1e-47  Score=317.09  Aligned_cols=244  Identities=22%  Similarity=0.263  Sum_probs=204.1

Q ss_pred             ccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|+++||||  ++|||++++++|+++|++|++++|.....++ .+++.+......+++||++|+++++++++++.+
T Consensus         2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHH-HHHHHHhcCCcceeeccCCCHHHHHHHHHHHHH
Confidence            4578999999996  6899999999999999999998765322222 222322212235689999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCC---CC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhH
Q 025259           86 KYGRIDVFVLNAAVNPYA---AD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~---~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      ++|++|++|||||.....   .+ +.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.+++..|+
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~  160 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMG  160 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHH
Confidence            999999999999975421   12 34678899999999999999999999999998778999999999988888899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+||++.+.||+++++.++
T Consensus       161 asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~~~~l~s~~~~~i  240 (260)
T PRK06997        161 LAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIEEVGNVAAFLLSDLASGV  240 (260)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999999 999999999999998764332212233334455688999999999999999999999999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      ||++|.+|||.+
T Consensus       241 tG~~i~vdgg~~  252 (260)
T PRK06997        241 TGEITHVDSGFN  252 (260)
T ss_pred             ceeEEEEcCChh
Confidence            999999999975

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=4.9e-47  Score=317.80  Aligned_cols=244  Identities=23%  Similarity=0.278  Sum_probs=207.4

Q ss_pred             cCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++|++|||||+  +|||+++|++|+++|++|++++|++. ..+..+++.+.-.....+++|++++++++++++++.++
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   85 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDA-LKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKK   85 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchH-HHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHh
Confidence            4679999999997  89999999999999999999988743 22223333322123567899999999999999999999


Q ss_pred             cCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||||+...   ..++.+.+.++|++++++|+.+++.+++++.|+|+++++||++||..+..+.+++..|++|
T Consensus        86 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~as  165 (272)
T PRK08159         86 WGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVA  165 (272)
T ss_pred             cCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhH
Confidence            9999999999997542   2467788999999999999999999999999999878999999999888888999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+++ +||||+|+||+++|++............+.....|.+++.+|||+|+.++||+++++.++||
T Consensus       166 Kaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~~~~L~s~~~~~itG  245 (272)
T PRK08159        166 KAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEEVGDSALYLLSDLSRGVTG  245 (272)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHHHHHHHHHHhCccccCccc
Confidence            99999999999999998 99999999999999986533221222223334568889999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||+..
T Consensus       246 ~~i~vdgG~~~  256 (272)
T PRK08159        246 EVHHVDSGYHV  256 (272)
T ss_pred             eEEEECCCcee
Confidence            99999999764

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.1e-47  Score=314.52  Aligned_cols=242  Identities=31%  Similarity=0.492  Sum_probs=215.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|++++++++++++++.+.+
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAEL   84 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            35889999999999999999999999999999999999999999888888777788999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCC-C-CChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPP-S-AMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~-~-~~~~y~~  162 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|.+   .++||++||..+..+. + ....|++
T Consensus        85 g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~a  163 (253)
T PRK05867         85 GGIDIAVCNAGIIT-VTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCA  163 (253)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHH
Confidence            99999999999865 667888999999999999999999999999998853   3689999998876533 3 4578999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++|+++++.|+++ |||||+|+||+++|++.....   +..+......|.+++.+|+|||+++.||+++.+.++|
T Consensus       164 sKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~---~~~~~~~~~~~~~r~~~p~~va~~~~~L~s~~~~~~t  240 (253)
T PRK05867        164 SKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYT---EYQPLWEPKIPLGRLGRPEELAGLYLYLASEASSYMT  240 (253)
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCcC
Confidence            999999999999999998 999999999999999865432   2233344567889999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||+..
T Consensus       241 G~~i~vdgG~~~  252 (253)
T PRK05867        241 GSDIVIDGGYTC  252 (253)
T ss_pred             CCeEEECCCccC
Confidence            999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-46  Score=313.31  Aligned_cols=250  Identities=28%  Similarity=0.436  Sum_probs=220.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +|+.++++|++|||||++|||++++++|+++|++|++++| +++.++...++++.. +.++.++++|+++++++++++++
T Consensus         1 ~~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   80 (260)
T PRK08416          1 NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKK   80 (260)
T ss_pred             CcccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence            4678899999999999999999999999999999988865 566677777777653 56889999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCC-----CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCC
Q 025259           83 TVEKYGRIDVFVLNAAVNP-----YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPS  155 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~  155 (255)
                      +.++++++|++|||||...     ...++.+.++++|++.+++|+.+++.+.+++.|.|++  .++||++||..+..+.+
T Consensus        81 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (260)
T PRK08416         81 IDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIE  160 (260)
T ss_pred             HHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCC
Confidence            9999999999999998642     1346778889999999999999999999999999863  46999999999888889


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ++..|++||+++++|+++++.|+++ ||||++|+||+++|++........+..+......|.+++.+|+|+|+.++||++
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~~  240 (260)
T PRK08416        161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQPEDLAGACLFLCS  240 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcC
Confidence            9999999999999999999999998 999999999999999876554334445555666788999999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.+.+++|+.+.+|||.+.+
T Consensus       241 ~~~~~~~G~~i~vdgg~~~~  260 (260)
T PRK08416        241 EKASWLTGQTIVVDGGTTFK  260 (260)
T ss_pred             hhhhcccCcEEEEcCCeecC
Confidence            99999999999999998753

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=2.1e-46  Score=314.12  Aligned_cols=244  Identities=33%  Similarity=0.507  Sum_probs=217.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++++.+.++.++.||++++++++.+++++.+.+
T Consensus         2 ~~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   80 (272)
T PRK08589          2 KRLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQF   80 (272)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999 77888888887777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      |++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|+ ++++||++||..+..+.++...|++||+|
T Consensus        81 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  160 (272)
T PRK08589         81 GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGA  160 (272)
T ss_pred             CCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHH
Confidence            99999999999864345778889999999999999999999999999985 45899999999999888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH------HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA------VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +++|+++++.|+++ |||||+|+||+++|++........+      ..+......|.+++.+|+|+|+.+.||+++...+
T Consensus       161 l~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  240 (272)
T PRK08589        161 VINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEEVAKLVVFLASDDSSF  240 (272)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHHHHHHHHHHcCchhcC
Confidence            99999999999998 9999999999999998765432211      1122233467888999999999999999999999


Q ss_pred             ccccEEeeCCCcc
Q 025259          240 ITGETLVVAGGMA  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|+++.+|||..
T Consensus       241 ~~G~~i~vdgg~~  253 (272)
T PRK08589        241 ITGETIRIDGGVM  253 (272)
T ss_pred             cCCCEEEECCCcc
Confidence            9999999999965

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.2e-46  Score=312.95  Aligned_cols=244  Identities=25%  Similarity=0.291  Sum_probs=207.5

Q ss_pred             ccccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ||+++++|+++||||  ++|||++++++|+++|++|++++|+.  +.+++..+++   +.++.++.||++++++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~i~~~~~   77 (256)
T PRK07889          1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL---PEPAPVLELDVTNEEHLASLAD   77 (256)
T ss_pred             CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc---CCCCcEEeCCCCCHHHHHHHHH
Confidence            457799999999999  89999999999999999999999864  3344444433   3357789999999999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCCh
Q 025259           82 KTVEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~  158 (255)
                      ++.+.+|++|++|||||+...   ..++.+.++++|++++++|+.+++.++++++|+|+++++||++++. +..+.+.+.
T Consensus        78 ~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~~~~~~~~  156 (256)
T PRK07889         78 RVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-ATVAWPAYD  156 (256)
T ss_pred             HHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-ccccCCccc
Confidence            999999999999999998631   1457788999999999999999999999999999877899999865 345567778


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCC-CCCChHHHHHHHHHhcCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN-RLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~  236 (255)
                      .|++||+|+++|+++++.|+++ |||||+|+||+++|++...........+......|.+ ++.+|+|||+.++||+++.
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s~~  236 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKDPTPVARAVVALLSDW  236 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCCHHHHHHHHHHHhCcc
Confidence            8999999999999999999998 9999999999999998765432233334444556777 5899999999999999999


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      +.+++|+++.+|||.+.
T Consensus       237 ~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        237 FPATTGEIVHVDGGAHA  253 (256)
T ss_pred             cccccceEEEEcCceec
Confidence            99999999999999763

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-46  Score=309.31  Aligned_cols=246  Identities=27%  Similarity=0.400  Sum_probs=224.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++.+.++
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            35688999999999999999999999999999999999999888888888777778889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+++.++++  +.++||++||..+..+.++...|+++|
T Consensus        84 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  162 (254)
T PRK08085         84 IGPIDVLINNAGIQR-RHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASK  162 (254)
T ss_pred             cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHH
Confidence            999999999999764 66788899999999999999999999999999884  447999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++++++++.|+++ |||+|+|.||+++|++.......+...+......|.+++.+|+||++++.||+++.+.++||+
T Consensus       163 ~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~~~i~G~  242 (254)
T PRK08085        163 GAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFLSSKASDFVNGH  242 (254)
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCC
Confidence            9999999999999998 999999999999999876654444555666677889999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      ++.+|||+..
T Consensus       243 ~i~~dgg~~~  252 (254)
T PRK08085        243 LLFVDGGMLV  252 (254)
T ss_pred             EEEECCCeee
Confidence            9999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=2e-46  Score=311.37  Aligned_cols=249  Identities=42%  Similarity=0.655  Sum_probs=217.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .+.+|++|++||||+++|||+++|++|++.|++|++++|+++.+++...++...+   .++..+.||+++++++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            3467999999999999999999999999999999999999999999998887754   4699999999999999999999


Q ss_pred             HHHH-cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHH-HHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC-
Q 025259           83 TVEK-YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS-SILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM-  157 (255)
Q Consensus        83 ~~~~-~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~-  157 (255)
                      ..++ +|++|+||||||......++.+.++++|++++++|++| .+.+.+.+.++++  +++.|+++||..+..+..+. 
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~  161 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSG  161 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCc
Confidence            9998 79999999999998755589999999999999999995 6677777777775  46789999999988776665 


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---HHHHHH--hhccCCCCCCCChHHHHHHHHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---DAVRKA--LEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      ..|+++|+|+++|+|+++.|+.+ |||||+|+||++.|++.......   .++.+.  .....|.+++..|+||++.+.|
T Consensus       162 ~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~eva~~~~f  241 (270)
T KOG0725|consen  162 VAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEEVAEAAAF  241 (270)
T ss_pred             ccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHHHHHhHHh
Confidence            79999999999999999999999 99999999999999982222221   233333  4456789999999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccCC
Q 025259          232 LASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |++++..|++|+.|.+|||++..
T Consensus       242 la~~~asyitG~~i~vdgG~~~~  264 (270)
T KOG0725|consen  242 LASDDASYITGQTIIVDGGFTVV  264 (270)
T ss_pred             hcCcccccccCCEEEEeCCEEee
Confidence            99998779999999999999853

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-46  Score=310.06  Aligned_cols=248  Identities=31%  Similarity=0.438  Sum_probs=219.0

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |+.++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++++
T Consensus         2 ~~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T PRK07062          2 MQIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAV   81 (265)
T ss_pred             CccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999999888888887664  347889999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+.++++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..+.++...|+
T Consensus        82 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~  160 (265)
T PRK07062         82 EARFGGVDMLVNNAGQGR-VSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATS  160 (265)
T ss_pred             HHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhH
Confidence            999999999999999864 667888999999999999999999999999999963  47999999999999988999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--------CHHHHHHh--hccCCCCCCCChHHHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--------NDAVRKAL--EGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~--~~~~~~~~~~~~~~va~~~~  230 (255)
                      ++|+++++|+++++.|+.+ |||||+|+||+++|++....+.        ..+..+..  ....|.+++.+|+|+|+.+.
T Consensus       161 asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~va~~~~  240 (265)
T PRK07062        161 AARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDEAARALF  240 (265)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHHHHHHHH
Confidence            9999999999999999998 9999999999999998653221        11111111  24568899999999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCccCC
Q 025259          231 FLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ||+++.+.++||+++.+|||+...
T Consensus       241 ~L~s~~~~~~tG~~i~vdgg~~~~  264 (265)
T PRK07062        241 FLASPLSSYTTGSHIDVSGGFARH  264 (265)
T ss_pred             HHhCchhcccccceEEEcCceEee
Confidence            999998999999999999997654

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=8.2e-46  Score=313.69  Aligned_cols=246  Identities=28%  Similarity=0.405  Sum_probs=217.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.  +..+++.+.+...+.++.++.+|+++++++.++++++.+
T Consensus        45 ~~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  124 (294)
T PRK07985         45 GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHK  124 (294)
T ss_pred             CccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            358899999999999999999999999999999988753  445666666666677888999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      .++++|++|||||......++.+.++++|++++++|+.+++.+++++.|+|++.++||++||..++.+.++...|+++|+
T Consensus       125 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKa  204 (294)
T PRK07985        125 ALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA  204 (294)
T ss_pred             HhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHH
Confidence            99999999999997543567888999999999999999999999999999987789999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++++++++.|+++ |||||+|.||+++|++.......++..+......|.+++.+|+|||+++.||+++++.+++|++
T Consensus       205 al~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~~~~fL~s~~~~~itG~~  284 (294)
T PRK07985        205 AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV  284 (294)
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHHHHHhhhChhcCCccccE
Confidence            999999999999998 9999999999999998533222333444566677889999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||...
T Consensus       285 i~vdgG~~~  293 (294)
T PRK07985        285 HGVCGGEHL  293 (294)
T ss_pred             EeeCCCeeC
Confidence            999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=3.9e-46  Score=314.76  Aligned_cols=246  Identities=24%  Similarity=0.250  Sum_probs=209.9

Q ss_pred             cccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc----------CC---eEEEEEecC-
Q 025259            7 AKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----------GI---EVIGIICHV-   70 (255)
Q Consensus         7 ~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----------~~---~~~~~~~D~-   70 (255)
                      .++|+||++|||||  ++|||+++|+.|+++|++|++ +|+.+.+++....++..          +.   ....+.+|+ 
T Consensus         4 ~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   82 (303)
T PLN02730          4 PIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAV   82 (303)
T ss_pred             CcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeeccee
Confidence            35699999999999  899999999999999999998 88888888877766531          11   145788898 


Q ss_pred             -CC------------------HHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Q 025259           71 -SN------------------EQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQ  130 (255)
Q Consensus        71 -~~------------------~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                       ++                  +++++++++++.+.+|++|+||||||... ..+++.+.+.++|++++++|+++++.++|
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~  162 (303)
T PLN02730         83 FDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQ  162 (303)
T ss_pred             cCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence             33                  44899999999999999999999998642 23688999999999999999999999999


Q ss_pred             HHHhcccCCCeEEEEcCcCccCCCCCC-hhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccChhhhhhcCCHHHH
Q 025259          131 DAAPHMQKGSSVVFISSIAGYQPPSAM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAQALLGNDAVR  207 (255)
Q Consensus       131 ~~~~~l~~~~~iv~vss~~~~~~~~~~-~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t~~~~~~~~~~~~~  207 (255)
                      +++|+|+++|+||++||..+..+.+++ ..|++||+|+++|+++|+.|++ + |||||+|+||+++|+|.......++..
T Consensus       163 ~~~p~m~~~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~  242 (303)
T PLN02730        163 HFGPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFIDDMI  242 (303)
T ss_pred             HHHHHHhcCCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccHHHH
Confidence            999999877999999999998887765 5899999999999999999997 3 899999999999999976532223333


Q ss_pred             HHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          208 KALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       208 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +......|+.++.+|+|+++.++||+++.+.+++|+.+.+|||+..
T Consensus       243 ~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        243 EYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             HHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence            3334455778899999999999999999999999999999999764

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-46  Score=307.34  Aligned_cols=244  Identities=28%  Similarity=0.403  Sum_probs=215.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|+++||||++|||++++++|+++|++|++++|+.+ .+++..++++..+.++.++++|++++++++++++++.+.
T Consensus         4 ~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   83 (254)
T PRK06114          4 FDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAE   83 (254)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999764 467777778777778889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCC--ChhhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSA--MAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~--~~~y~~  162 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++.+.+++.|.|+  +.++||++||..+..+.++  ...|++
T Consensus        84 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  162 (254)
T PRK06114         84 LGALTLAVNAAGIAN-ANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNA  162 (254)
T ss_pred             cCCCCEEEECCCCCC-CCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHH
Confidence            999999999999865 56788899999999999999999999999999885  3479999999988766543  688999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++++++++.|+.+ |||||+|.||+++|++.... ...+..+......|.+++.+|+||++.++||+++.+.++|
T Consensus       163 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~t  241 (254)
T PRK06114        163 SKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQRMAKVDEMVGPAVFLLSDAASFCT  241 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcC
Confidence            999999999999999998 99999999999999986531 1122334455677899999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||++.
T Consensus       242 G~~i~~dgg~~~  253 (254)
T PRK06114        242 GVDLLVDGGFVC  253 (254)
T ss_pred             CceEEECcCEec
Confidence            999999999863

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-45  Score=305.35  Aligned_cols=242  Identities=29%  Similarity=0.476  Sum_probs=212.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH--
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK--   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--   86 (255)
                      +++|+++||||++|||++++++|+++|++|++++ ++.+.+++...+++..+.++..+.+|+++.++++.+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            3589999999999999999999999999998875 6667777777788777777889999999999999999988763  


Q ss_pred             --cC--CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           87 --YG--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        87 --~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                        ++  ++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|++.++||++||..+..+.++...|++
T Consensus        82 ~~~g~~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  160 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  160 (252)
T ss_pred             hhcCCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHH
Confidence              34  7999999999764 567888999999999999999999999999999987899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++++++++.|+++ |||||+|.||+++|++.......+..........+.+++.+|+|+|+.+.||+++.+.+++
T Consensus       161 sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~  240 (252)
T PRK12747        161 TKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT  240 (252)
T ss_pred             HHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHHHHHHHHHHHcCccccCcC
Confidence            999999999999999998 9999999999999998765443333223333344678899999999999999999899999


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+.+|||..
T Consensus       241 G~~i~vdgg~~  251 (252)
T PRK12747        241 GQLIDVSGGSC  251 (252)
T ss_pred             CcEEEecCCcc
Confidence            99999999975

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-45  Score=312.72  Aligned_cols=247  Identities=29%  Similarity=0.444  Sum_probs=220.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++|++|||||++|||++++++|+++|++|+++.++.+  ..++..+.++..+.++.++.||++++++++++++++.
T Consensus        50 ~~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  129 (300)
T PRK06128         50 FGRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAV  129 (300)
T ss_pred             ccccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999998887643  4556677777777789999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +.++++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|+++++||++||..++.+.++...|++||
T Consensus       130 ~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK  209 (300)
T PRK06128        130 KELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTK  209 (300)
T ss_pred             HHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHH
Confidence            99999999999999764456788899999999999999999999999999998788999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+.+ ||+||+|.||+++|++........+..+.+....|.+++.+|+|++..++||+++.+.+++|+
T Consensus       210 ~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~~G~  289 (300)
T PRK06128        210 AAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAPLYVLLASQESSYVTGE  289 (300)
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCccCc
Confidence            9999999999999988 999999999999999864322233444555667789999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||...
T Consensus       290 ~~~v~gg~~~  299 (300)
T PRK06128        290 VFGVTGGLLL  299 (300)
T ss_pred             EEeeCCCEeC
Confidence            9999999865

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.1e-45  Score=306.50  Aligned_cols=243  Identities=28%  Similarity=0.487  Sum_probs=216.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|+++++..  .++..+++.+.+.++..+++|++++++++++++++.++++
T Consensus         7 ~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (253)
T PRK08993          7 SLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVE--PTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG   84 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcc--hHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            68899999999999999999999999999999888764  2455566666667889999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++|++|||||... ..++.+.++++|++++++|+.+++.+++++.|+|++   .++||++||..+..+.+....|+++|+
T Consensus        85 ~~D~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  163 (253)
T PRK08993         85 HIDILVNNAGLIR-REDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKS  163 (253)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHH
Confidence            9999999999864 667888999999999999999999999999998853   478999999999998888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++++++++.|+.+ ||+||+|.||+++|++..................|.+++.+|+|+|+.+.||+++.+.+++|++
T Consensus       164 a~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~~~~~~~G~~  243 (253)
T PRK08993        164 GVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPVVFLASSASDYINGYT  243 (253)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcE
Confidence            999999999999998 9999999999999998765433333334455677889999999999999999999999999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +.+|||...|
T Consensus       244 ~~~dgg~~~~  253 (253)
T PRK08993        244 IAVDGGWLAR  253 (253)
T ss_pred             EEECCCEecC
Confidence            9999998765

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-45  Score=304.94  Aligned_cols=248  Identities=32%  Similarity=0.502  Sum_probs=225.0

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |++++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.+|++++++++++++++.+
T Consensus         1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   80 (253)
T PRK06172          1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIA   80 (253)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            44668899999999999999999999999999999999999988888888887777899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|++|||+|......++.+.+.++|++++++|+.+++.++++++|++.  +.++||++||..+..+.+++..|+++
T Consensus        81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~s  160 (253)
T PRK06172         81 AYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAAS  160 (253)
T ss_pred             HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHH
Confidence            9999999999999865345678889999999999999999999999999884  34789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      |+++++|+++++.|+.+ +|+|++|.||+++|++...... .+...+......|..++.+|+|+++.+.||+++...+++
T Consensus       161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia~~~~~l~~~~~~~~~  240 (253)
T PRK06172        161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVASAVLYLCSDGASFTT  240 (253)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHHHHHHHHhCccccCcC
Confidence            99999999999999988 9999999999999999876543 344555566677888999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.|.+|||+++
T Consensus       241 G~~i~~dgg~~~  252 (253)
T PRK06172        241 GHALMVDGGATA  252 (253)
T ss_pred             CcEEEECCCccC
Confidence            999999999875

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5.9e-47  Score=312.02  Aligned_cols=232  Identities=42%  Similarity=0.662  Sum_probs=214.8

Q ss_pred             CCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHc-CCCcEEE
Q 025259           19 AST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKY-GRIDVFV   94 (255)
Q Consensus        19 G~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d~lv   94 (255)
                      |++  +|||+++|++|+++|++|++++|+.+.++...+++.+. +.+  ++.||++++++++++++++.+.+ |++|++|
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~--~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV   78 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE--VIQCDLSDEESVEALFDEAVERFGGRIDILV   78 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE--EEESCTTSHHHHHHHHHHHHHHHCSSESEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc--eEeecCcchHHHHHHHHHHHhhcCCCeEEEE
Confidence            666  99999999999999999999999999877766666554 444  49999999999999999999999 9999999


Q ss_pred             ECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           95 LNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        95 ~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      ||+|....   ..++.+.+.++|++.+++|+.+++.++|++.|+|+++++||++||..+..+.+++..|+++|+|+++|+
T Consensus        79 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~  158 (241)
T PF13561_consen   79 NNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLT  158 (241)
T ss_dssp             EEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHH
T ss_pred             ecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHH
Confidence            99998753   368888999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             HHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          172 KALAAEMAP--DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       172 ~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      |+++.|+++  |||||+|+||+++|++.......++..+......|++++.+|+|||+++.||+++.++++|||+|.+||
T Consensus       159 r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~fL~s~~a~~itG~~i~vDG  238 (241)
T PF13561_consen  159 RSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLFLASDAASYITGQVIPVDG  238 (241)
T ss_dssp             HHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHHHHSGGGTTGTSEEEEEST
T ss_pred             HHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHHHhCccccCccCCeEEECC
Confidence            999999998  999999999999999987766667788888999999999999999999999999999999999999999


Q ss_pred             Ccc
Q 025259          250 GMA  252 (255)
Q Consensus       250 G~~  252 (255)
                      |++
T Consensus       239 G~s  241 (241)
T PF13561_consen  239 GFS  241 (241)
T ss_dssp             TGG
T ss_pred             CcC
Confidence            985

...

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-45  Score=305.31  Aligned_cols=245  Identities=29%  Similarity=0.464  Sum_probs=219.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+ +..++..+.+.+.+.++.++.||++++++++++++++.+.+
T Consensus        11 ~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   89 (258)
T PRK06935         11 FSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEF   89 (258)
T ss_pred             ccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999998 56667777776667788999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.|+|++  .++||++||..+..+.++.+.|+++|+
T Consensus        90 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  168 (258)
T PRK06935         90 GKIDILVNNAGTIR-RAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKH  168 (258)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHH
Confidence            99999999999865 567888899999999999999999999999999853  479999999999989889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++++++++++.|+.+ |||||+|.||+++|++.......+...+......|.+++.+|+|+++.+.||+++.+.+++|++
T Consensus       169 a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  248 (258)
T PRK06935        169 GVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGAAVFLASRASDYVNGHI  248 (258)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCCCCCE
Confidence            999999999999998 9999999999999998655433333344555667889999999999999999999999999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +.+|||+..|
T Consensus       249 i~~dgg~~~~  258 (258)
T PRK06935        249 LAVDGGWLVR  258 (258)
T ss_pred             EEECCCeecC
Confidence            9999998765

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.4e-45  Score=303.86  Aligned_cols=246  Identities=30%  Similarity=0.461  Sum_probs=226.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||+++||++++++|+++|++|++++|+++.+++..+++++.+.++.++++|++++++++.+++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            68899999999999999999999999999999999999888888888877777899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.++|+  ..++||++||..+..+.+++..|+++|++
T Consensus        87 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a  165 (255)
T PRK07523         87 PIDILVNNAGMQF-RTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGA  165 (255)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHH
Confidence            9999999999875 67888999999999999999999999999999985  35799999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.|+++ ||+|++|.||+++|++.......+...++.....|.+++.+|+|+|+.++||+++++.+++|++|
T Consensus       166 ~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~i  245 (255)
T PRK07523        166 VGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGACVFLASDASSFVNGHVL  245 (255)
T ss_pred             HHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEE
Confidence            99999999999988 99999999999999987665544555666777788999999999999999999999999999999


Q ss_pred             eeCCCccCCC
Q 025259          246 VVAGGMASRL  255 (255)
Q Consensus       246 ~~dgG~~~~~  255 (255)
                      .+|||+..++
T Consensus       246 ~~~gg~~~~~  255 (255)
T PRK07523        246 YVDGGITASL  255 (255)
T ss_pred             EECCCeeccC
Confidence            9999988654

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=9.4e-46  Score=293.53  Aligned_cols=228  Identities=26%  Similarity=0.366  Sum_probs=202.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |..+++|+++|||||||||.++|++|+++|++|++++|+.+.++++..++.+  .++.++..|++|.++++.+++.+.++
T Consensus         1 m~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~--~~~~~~~~DVtD~~~~~~~i~~~~~~   78 (246)
T COG4221           1 MTTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA--GAALALALDVTDRAAVEAAIEALPEE   78 (246)
T ss_pred             CCCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc--CceEEEeeccCCHHHHHHHHHHHHHh
Confidence            4567889999999999999999999999999999999999999999999866  67899999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |+++|+||||||... ..++.+...++|++|+++|+.|.++.+++++|.|.  +.|.||++||.++..++++...|+++|
T Consensus        79 ~g~iDiLvNNAGl~~-g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK  157 (246)
T COG4221          79 FGRIDILVNNAGLAL-GDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATK  157 (246)
T ss_pred             hCcccEEEecCCCCc-CChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhH
Confidence            999999999999987 58999999999999999999999999999999994  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +++..|++.|+.|+.. +|||..|+||.+.|.......... -.++..+........+|+|||+.+.|.++...+
T Consensus       158 ~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~V~~~~~~P~~  231 (246)
T COG4221         158 AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEAVLFAATQPQH  231 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHHHHHHHhCCCc
Confidence            9999999999999988 999999999999776544433221 122222222345588999999999999987644

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=4.9e-45  Score=306.62  Aligned_cols=248  Identities=28%  Similarity=0.440  Sum_probs=220.2

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..+++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.+++||+++++++..+++++.+
T Consensus         4 ~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   83 (278)
T PRK08277          4 NLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILE   83 (278)
T ss_pred             ceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            33468899999999999999999999999999999999999888888888877777899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC--------------CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcC
Q 025259           86 KYGRIDVFVLNAAVNPY--------------AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIA  149 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~--------------~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~  149 (255)
                      +++++|++|||||....              ..++.+.+.++|++.+++|+.+++.+++++.|.|+  +.++||++||..
T Consensus        84 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~  163 (278)
T PRK08277         84 DFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMN  163 (278)
T ss_pred             HcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccch
Confidence            99999999999996431              13467888999999999999999999999999885  357999999999


Q ss_pred             ccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-----HHHHHHhhccCCCCCCCChH
Q 025259          150 GYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-----DAVRKALEGKTLLNRLGTTG  223 (255)
Q Consensus       150 ~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~  223 (255)
                      ++.+.++...|++||+|+++|+++++.|+.+ +||||+|.||+++|++.......     .+..+......|.+++.+|+
T Consensus       164 ~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  243 (278)
T PRK08277        164 AFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPMGRFGKPE  243 (278)
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCccCCCCHH
Confidence            9999999999999999999999999999998 99999999999999986543221     22334455667889999999


Q ss_pred             HHHHHHHHhcCC-CCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASD-DASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~-~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+++.||+++ .+.++||++|.+|||++.
T Consensus       244 dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        244 ELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             HHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            999999999999 899999999999999864

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-45  Score=307.81  Aligned_cols=244  Identities=28%  Similarity=0.456  Sum_probs=212.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +.+++|+++||||++|||++++++|+++|++|++++|+++.++++.+++   +.++.++++|++++++++.+++++.+++
T Consensus         2 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (263)
T PRK06200          2 GWLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF---GDHVLVVEGDVTSYADNQRAVDQTVDAF   78 (263)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHhc
Confidence            4478999999999999999999999999999999999988877665544   4467889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHH----HHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESV----LDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +++|++|||||+.....++.+.++++    |++++++|+.+++.+++++.|.|+ +.++||+++|..+..+.++...|++
T Consensus        79 g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~  158 (263)
T PRK06200         79 GKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTA  158 (263)
T ss_pred             CCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHH
Confidence            99999999999864345566667665    899999999999999999999985 4679999999999998888999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ||++++.|+++++.|++++||||+|.||+++|++.....         ..++..+......|.+++.+|+|+|+.+.||+
T Consensus       159 sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~eva~~~~fl~  238 (263)
T PRK06200        159 SKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPLQFAPQPEDHTGPYVLLA  238 (263)
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCCCCCCCHHHHhhhhhhee
Confidence            999999999999999988999999999999999854210         11223455566778999999999999999999


Q ss_pred             CCC-CCCccccEEeeCCCccCC
Q 025259          234 SDD-ASYITGETLVVAGGMASR  254 (255)
Q Consensus       234 s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      ++. +.++||++|.+|||+.+|
T Consensus       239 s~~~~~~itG~~i~vdgG~~~~  260 (263)
T PRK06200        239 SRRNSRALTGVVINADGGLGIR  260 (263)
T ss_pred             cccccCcccceEEEEcCceeec
Confidence            998 999999999999998754

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9e-45  Score=302.46  Aligned_cols=242  Identities=29%  Similarity=0.436  Sum_probs=211.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.+++||++++++++++++++.+.
T Consensus         1 m~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~   77 (261)
T PRK08265          1 MIGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL---GERARFIATDITDDAAIERAVATVVAR   77 (261)
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCeeEEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999988777665554   457889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-cCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++++|++|||||... ... .+.+.++|++.+++|+.+++.+++++.|+| ++.++||++||..+..+.++...|+++|+
T Consensus        78 ~g~id~lv~~ag~~~-~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKa  155 (261)
T PRK08265         78 FGRVDILVNLACTYL-DDG-LASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKA  155 (261)
T ss_pred             hCCCCEEEECCCCCC-CCc-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHH
Confidence            999999999999754 333 367899999999999999999999999988 46689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HHHHHHh-hccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DAVRKAL-EGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      ++++++++++.|+.+ |||||+|+||+++|++....... ....+.. ....|.+++.+|+|+|+++.||+++...++||
T Consensus       156 a~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~~l~s~~~~~~tG  235 (261)
T PRK08265        156 AIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQVVAFLCSDAASFVTG  235 (261)
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHHHHHHcCccccCccC
Confidence            999999999999998 99999999999999987654321 1122222 23468889999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.|.+|||++.
T Consensus       236 ~~i~vdgg~~~  246 (261)
T PRK08265        236 ADYAVDGGYSA  246 (261)
T ss_pred             cEEEECCCeec
Confidence            99999999764

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-45  Score=308.43  Aligned_cols=238  Identities=25%  Similarity=0.353  Sum_probs=209.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ---------KNVDKAVEKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      ..+++|++|||||++|||++++++|++.|++|++++++.         +.+++..+++...+.++.++.+|+++++++++
T Consensus         2 ~~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~   81 (286)
T PRK07791          2 GLLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAAN   81 (286)
T ss_pred             CccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHH
Confidence            357899999999999999999999999999999998876         67778888887777788999999999999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEEcCcCc
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFISSIAG  150 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~vss~~~  150 (255)
                      +++++.+.+|++|++|||||+.. ..++.+.+.++|++++++|+.+++.+++++.|+|++        .++||++||..+
T Consensus        82 ~~~~~~~~~g~id~lv~nAG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         82 LVDAAVETFGGLDVLVNNAGILR-DRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            99999999999999999999865 567889999999999999999999999999998852        268999999999


Q ss_pred             cCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCC--CCCChHHHHH
Q 025259          151 YQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN--RLGTTGNMAA  227 (255)
Q Consensus       151 ~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~va~  227 (255)
                      ..+.+++..|++||+|+++|+++++.|+++ |||||+|+|| ++|++.....      .......+.+  +..+|+|+|+
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~------~~~~~~~~~~~~~~~~pedva~  233 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF------AEMMAKPEEGEFDAMAPENVSP  233 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH------HHHHhcCcccccCCCCHHHHHH
Confidence            999999999999999999999999999998 9999999999 7888754321      1111222333  4679999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++||+++.+.+++|++|.+|||+..
T Consensus       234 ~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        234 LVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHhCchhcCCCCcEEEEcCCceE
Confidence            99999999999999999999999763

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-44  Score=299.30  Aligned_cols=245  Identities=36%  Similarity=0.576  Sum_probs=223.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.+.+.++.++.+|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            47889999999999999999999999999999999999988888888888777788899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||||......++.+.+.++|++.+++|+.+++.++++++|+++  +.++|+++||..+..+.+++..|++||+
T Consensus        84 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  163 (252)
T PRK07035         84 GRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKA  163 (252)
T ss_pred             CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHH
Confidence            99999999999764456778889999999999999999999999999985  3479999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++++++++++.|+.+ ||+|++|+||+++|++.......+...+......|.+++.+|+|+|+.+.||+++...+++|++
T Consensus       164 al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  243 (252)
T PRK07035        164 AVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMAGAVLYLASDASSYTTGEC  243 (252)
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHHHHHHHHhCccccCccCCE
Confidence            999999999999998 9999999999999998766554445555666777889999999999999999999999999999


Q ss_pred             EeeCCCcc
Q 025259          245 LVVAGGMA  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||+.
T Consensus       244 ~~~dgg~~  251 (252)
T PRK07035        244 LNVDGGYL  251 (252)
T ss_pred             EEeCCCcC
Confidence            99999975

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1e-44  Score=301.59  Aligned_cols=235  Identities=31%  Similarity=0.454  Sum_probs=208.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..           .++.++.||++++++++++++++.+++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~-----------~~~~~~~~D~~~~~~i~~~~~~~~~~~   70 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY-----------NDVDYFKVDVSNKEQVIKGIDYVISKY   70 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc-----------CceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999999999986432           257889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..+..+.+++..|+++|+
T Consensus        71 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  149 (258)
T PRK06398         71 GRIDILVNNAGIES-YGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKH  149 (258)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHH
Confidence            99999999999864 67888999999999999999999999999999984  4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-----CHH----HHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-----NDA----VRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++++++++.|+.++||||+|.||+++|++......     .++    .........|.+++.+|+|+|+.++||+++.
T Consensus       150 al~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~s~~  229 (258)
T PRK06398        150 AVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVGKPEEVAYVVAFLASDL  229 (258)
T ss_pred             HHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCcCHHHHHHHHHHHcCcc
Confidence            9999999999999888999999999999998754321     111    1122344568889999999999999999999


Q ss_pred             CCCccccEEeeCCCccCC
Q 025259          237 ASYITGETLVVAGGMASR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+++|+++.+|||++..
T Consensus       230 ~~~~~G~~i~~dgg~~~~  247 (258)
T PRK06398        230 ASFITGECVTVDGGLRAL  247 (258)
T ss_pred             cCCCCCcEEEECCccccC
Confidence            999999999999998754

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-44  Score=299.24  Aligned_cols=239  Identities=30%  Similarity=0.370  Sum_probs=211.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+ ++.++++|++++++++++++++.++++++|+|
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l   80 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYG-EVYAVKADLSDKDDLKNLVKEAWELLGGIDAL   80 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcC-CceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            69999999999999999999999999999999998888888887654 68889999999999999999999999999999


Q ss_pred             EECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           94 VLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        94 v~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      |||||... ...++.+.+.++|.+.+++|+.+++.+.+.++|.|.   +.++||++||..+..+.++...|+++|+++++
T Consensus        81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~  160 (259)
T PRK08340         81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQ  160 (259)
T ss_pred             EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHH
Confidence            99999753 134577888999999999999999999999999763   35799999999999888999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHH-HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++++.|+++ |||||+|+||+++|++.....         ..++ .........|.+++.+|+|||+++.||++++++
T Consensus       161 ~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~~~fL~s~~~~  240 (259)
T PRK08340        161 LAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELGSLIAFLLSENAE  240 (259)
T ss_pred             HHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHHHHHHHHcCcccc
Confidence            99999999998 999999999999999865321         1111 223445567889999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++||+++.+|||..+
T Consensus       241 ~itG~~i~vdgg~~~  255 (259)
T PRK08340        241 YMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccCceEeecCCcCC
Confidence            999999999999875

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=5.3e-44  Score=295.36  Aligned_cols=243  Identities=34%  Similarity=0.526  Sum_probs=214.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+.  .++..+.++..+.++.++++|++++++++++++++.+.++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSE--PSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFG   79 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCch--HHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999975  3455566666667889999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.++|.+   .++||++||..+..+.++...|+++|+
T Consensus        80 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        80 HIDILVNNAGIIR-RADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            9999999999865 567788899999999999999999999999998853   469999999999888888899999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++++++++++.|+.+ ||+|++|.||+++|++..................|.+++.+|+|+|+++.||+++...+++|++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~~G~~  238 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYVNGYT  238 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCcE
Confidence            999999999999998 9999999999999998764433333333445567888999999999999999999899999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      +.+|||+..|
T Consensus       239 i~~dgg~~~~  248 (248)
T TIGR01832       239 LAVDGGWLAR  248 (248)
T ss_pred             EEeCCCEecC
Confidence            9999998654

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1e-44  Score=306.05  Aligned_cols=248  Identities=23%  Similarity=0.252  Sum_probs=199.6

Q ss_pred             cccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------------------------HH
Q 025259            5 NMAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK-------------------------LK   57 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~-------------------------~~   57 (255)
                      +|+.+++||++||||++  +|||+++|++|+++|++|++.++.+ .++.....                         +.
T Consensus         1 ~~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~   79 (299)
T PRK06300          1 MLKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMD   79 (299)
T ss_pred             CCCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhh
Confidence            35678999999999996  9999999999999999999977541 11111000                         00


Q ss_pred             HcCCeEEEEEecCCC--------HHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHH
Q 025259           58 ALGIEVIGIICHVSN--------EQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILL  128 (255)
Q Consensus        58 ~~~~~~~~~~~D~~~--------~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~  128 (255)
                      ..-....-+.+|+++        +++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|+.|++.+
T Consensus        80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l  159 (299)
T PRK06300         80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSL  159 (299)
T ss_pred             hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHH
Confidence            000112222232222        34699999999999999999999998643 246788999999999999999999999


Q ss_pred             HHHHHhcccCCCeEEEEcCcCccCCCCCCh-hhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCHH
Q 025259          129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQALLGNDA  205 (255)
Q Consensus       129 ~~~~~~~l~~~~~iv~vss~~~~~~~~~~~-~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~  205 (255)
                      +|+++|+|+++++||+++|..+..+.++.. .|++||+|+++|+++++.|+++  |||||+|+||+++|++.......++
T Consensus       160 ~~a~~p~m~~~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~  239 (299)
T PRK06300        160 LSHFGPIMNPGGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIER  239 (299)
T ss_pred             HHHHHHHhhcCCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHH
Confidence            999999998889999999999988888764 8999999999999999999974  8999999999999998754322233


Q ss_pred             HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          206 VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+......|.++..+|+||++.+.||+++.+.++||+++.+|||...
T Consensus       240 ~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        240 MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            334445567888999999999999999999999999999999999764

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-43  Score=294.97  Aligned_cols=243  Identities=28%  Similarity=0.425  Sum_probs=213.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++++|+++|||+++|||++++++|++.|++|++++|+++.+++..+++... +.++.++.+|+++++++++++++   
T Consensus         2 ~~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~---   78 (259)
T PRK06125          2 DLHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE---   78 (259)
T ss_pred             CcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH---
Confidence            45688999999999999999999999999999999999998888888887654 56788999999999999888764   


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                       ++++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.|.|++  .++||++||..+..+.+++..|+++
T Consensus        79 -~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~as  156 (259)
T PRK06125         79 -AGDIDILVNNAGAIP-GGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAG  156 (259)
T ss_pred             -hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHH
Confidence             578999999999864 678889999999999999999999999999999963  4789999999998888888999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc--------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL--------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      |+|+++|+++++.|+.+ |||||+|+||+++|++.....        ..++.........|.+++.+|+|+|+.++||++
T Consensus       157 k~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~  236 (259)
T PRK06125        157 NAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEEVADLVAFLAS  236 (259)
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHHHHHHHHHHcC
Confidence            99999999999999998 999999999999999754332        122333344456788899999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.+.++||+.|.+|||...|
T Consensus       237 ~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        237 PRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             chhccccCceEEecCCeeec
Confidence            99999999999999998765

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-43  Score=294.17  Aligned_cols=238  Identities=29%  Similarity=0.422  Sum_probs=211.5

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCC-----------hhHHHHHHHHHHHcCCeEEEEEecCCCHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRK-----------QKNVDKAVEKLKALGIEVIGIICHVSNEQ   74 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (255)
                      .+|++|++|||||+  +|||+++|++|+++|++|++++|.           .+..++..+++++.+.++.++++|+++++
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            57999999999999  599999999999999999987542           23344556667777888999999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ  152 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~  152 (255)
                      +++++++++.+.+|++|++|||||... ..++.+.+.++|++++++|+.+++.+.+++.|.|+  +.++||++||..+..
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~  160 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYST-NNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQG  160 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCC
Confidence            999999999999999999999999864 56788999999999999999999999999999985  357999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      +.+++..|+++|+++++|+++++.|+.+ +|+|++|+||+++|++..     ....+......|.+++.+|+|+|+.+.|
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-----~~~~~~~~~~~~~~~~~~~~d~a~~~~~  235 (256)
T PRK12859        161 PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-----EEIKQGLLPMFPFGRIGEPKDAARLIKF  235 (256)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-----HHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            9999999999999999999999999998 999999999999998643     2234445566688889999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCc
Q 025259          232 LASDDASYITGETLVVAGGM  251 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~  251 (255)
                      |+++.+.+++|+++.+|||+
T Consensus       236 l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        236 LASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HhCccccCccCcEEEeCCCc
Confidence            99999999999999999995

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-43  Score=294.14  Aligned_cols=246  Identities=30%  Similarity=0.446  Sum_probs=219.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |..++++|+++||||+++||++++++|+++|+.|+++.|+. +..+...++++..+.++.++.+|+++++++.++++.+.
T Consensus         1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~   80 (261)
T PRK08936          1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAV   80 (261)
T ss_pred             CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            34578999999999999999999999999999999888854 45666777777777788899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +.++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++.++++|++   .++||++||..+..+.++...|+
T Consensus        81 ~~~g~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  159 (261)
T PRK08936         81 KEFGTLDVMINNAGIEN-AVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYA  159 (261)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccH
Confidence            99999999999999865 667888899999999999999999999999999853   47999999999998999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      ++|+|++.++++++.|+.+ +|+|++|.||+++|++.......++.........|.+++.+|+|+++.+.||+++.+.++
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  239 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIAAVAAWLASSEASYV  239 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCc
Confidence            9999999999999999998 999999999999999865444344444445566788999999999999999999999999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.+.+|||+.
T Consensus       240 ~G~~i~~d~g~~  251 (261)
T PRK08936        240 TGITLFADGGMT  251 (261)
T ss_pred             cCcEEEECCCcc
Confidence            999999999976

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-43  Score=293.00  Aligned_cols=251  Identities=31%  Similarity=0.472  Sum_probs=227.3

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |+..+ +.++++|+++||||+++||++++++|+++|++|++++|+++.+++..+++++.+.++.++.||+++++++.+++
T Consensus         1 ~~~~~-~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   79 (256)
T PRK06124          1 MSILQ-RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAF   79 (256)
T ss_pred             CCccc-ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence            44444 45689999999999999999999999999999999999998888888888877778999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +++.+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+++.+.|+  +.++||++||..+..+.++..
T Consensus        80 ~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~  158 (256)
T PRK06124         80 ARIDAEHGRLDILVNNVGARD-RRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDA  158 (256)
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCcc
Confidence            999999999999999999865 67788999999999999999999999999999884  457999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|+++|++++.++++++.|+.+ +|++++|+||+++|++.......+...+......+.+++.+|+|+++.+++|+++.+
T Consensus       159 ~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  238 (256)
T PRK06124        159 VYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGAAVFLASPAA  238 (256)
T ss_pred             HhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999988 999999999999999866554455555666677788999999999999999999999


Q ss_pred             CCccccEEeeCCCccC
Q 025259          238 SYITGETLVVAGGMAS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      .++||+.+.+|||+..
T Consensus       239 ~~~~G~~i~~dgg~~~  254 (256)
T PRK06124        239 SYVNGHVLAVDGGYSV  254 (256)
T ss_pred             CCcCCCEEEECCCccc
Confidence            9999999999999764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=2.9e-43  Score=292.29  Aligned_cols=251  Identities=29%  Similarity=0.453  Sum_probs=222.2

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |.+.+- .++++|+++||||+++||++++++|+++|++|++++|+.+..+...++++..+.++.++.+|+++++++.+++
T Consensus         1 ~~~~~~-~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~   79 (255)
T PRK06113          1 MFNSDN-LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_pred             CCCccc-cCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence            666633 3688999999999999999999999999999999999998888888888777778889999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +.+.+.++++|++|||+|... ..++ +.+.++|++.+++|+.+++.+.+++.|+|.  +.++||++||..+..+.+++.
T Consensus        80 ~~~~~~~~~~d~li~~ag~~~-~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~  157 (255)
T PRK06113         80 DFALSKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_pred             HHHHHHcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcc
Confidence            999999999999999999764 4444 688999999999999999999999999885  346999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|+++|+++++|+++++.++.+ +||||+|.||+++|++..... .+..........+.+++.+|+|+++++.||+++..
T Consensus       158 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~  236 (255)
T PRK06113        158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999988 999999999999999876543 23344445566778889999999999999999999


Q ss_pred             CCccccEEeeCCCccCCC
Q 025259          238 SYITGETLVVAGGMASRL  255 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~~  255 (255)
                      .+++|++|.+|||...+|
T Consensus       237 ~~~~G~~i~~~gg~~~~~  254 (255)
T PRK06113        237 SWVSGQILTVSGGGVQEL  254 (255)
T ss_pred             cCccCCEEEECCCccccC
Confidence            999999999999965543

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-43  Score=292.64  Aligned_cols=237  Identities=36%  Similarity=0.506  Sum_probs=211.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.        ...+.++.++++|++++++++++++.+.+.+
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~--------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   73 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE--------TVDGRPAEFHAADVRDPDQVAALVDAIVERH   73 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh--------hhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999998754        1234578889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.++|.+   .++||++||..+..+.++...|+++|
T Consensus        74 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         74 GRLDVLVNNAGGSP-YALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence            99999999999764 567788899999999999999999999999998853   37999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       165 aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++++|+++++.|+.+.|++++|.||+++|++.......++.........|.+++.+|+|+|+.++||+++.+.++||+.
T Consensus       153 ~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~L~~~~~~~i~G~~  232 (252)
T PRK07856        153 AGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWACLFLASDLASYVSGAN  232 (252)
T ss_pred             HHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCCccCCE
Confidence            99999999999999878999999999999998765444444445566677889999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||...
T Consensus       233 i~vdgg~~~  241 (252)
T PRK07856        233 LEVHGGGER  241 (252)
T ss_pred             EEECCCcch
Confidence            999999764

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=3.6e-44  Score=298.92  Aligned_cols=243  Identities=29%  Similarity=0.487  Sum_probs=206.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.++++.+.   .+.++.++.+|+++++++.++++++.++++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA---HGDAVVGVEGDVRSLDDHKEAVARCVAAFG   78 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh---cCCceEEEEeccCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999998776665432   345788899999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCH----HHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKE----SVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|||||......++.+.+.    ++|++++++|+.+++.+++++.|+|+ +.++||+++|..+..+.++...|+++
T Consensus        79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  158 (262)
T TIGR03325        79 KIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAA  158 (262)
T ss_pred             CCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHH
Confidence            99999999997532334444443    57999999999999999999999985 45789999999999888888999999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc---CC-----HHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL---GN-----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      |+|+++|+++++.|++++||||+|+||+++|++.....   ..     ....+......|.+++.+|+|+|+.+.||+++
T Consensus       159 Kaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~~~~~l~s~  238 (262)
T TIGR03325       159 KHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIGRMPDAEEYTGAYVFFATR  238 (262)
T ss_pred             HHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCCCCCChHHhhhheeeeecC
Confidence            99999999999999988899999999999999864321   11     01223344567899999999999999999997


Q ss_pred             -CCCCccccEEeeCCCccCC
Q 025259          236 -DASYITGETLVVAGGMASR  254 (255)
Q Consensus       236 -~~~~~~G~~i~~dgG~~~~  254 (255)
                       .+.+++|++|.+|||...+
T Consensus       239 ~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       239 GDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             CCcccccceEEEecCCeeec
Confidence             4678999999999997653

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.7e-43  Score=291.69  Aligned_cols=241  Identities=32%  Similarity=0.484  Sum_probs=215.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+++||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            78999999999999999999999999999999999888888888877777889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.|++   .++||++||..+..+.++...|+++|++++
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  160 (256)
T PRK08643         82 VVVNNAGVAP-TTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVR  160 (256)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHH
Confidence            9999999865 667888899999999999999999999999998853   368999999999999889999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      .+++.++.|+.+ ||+|++|+||+++|++......         ............+.+++.+|+|+|+.+.||+++...
T Consensus       161 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~L~~~~~~  240 (256)
T PRK08643        161 GLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDVANCVSFLAGPDSD  240 (256)
T ss_pred             HHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999998 9999999999999998754321         111123344566888999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++||++|.+|||.+.
T Consensus       241 ~~~G~~i~vdgg~~~  255 (256)
T PRK08643        241 YITGQTIIVDGGMVF  255 (256)
T ss_pred             CccCcEEEeCCCeec
Confidence            999999999999763

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-43  Score=301.23  Aligned_cols=240  Identities=24%  Similarity=0.363  Sum_probs=200.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh----------hHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ----------KNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      ||.++++|+++||||++|||++++++|++.|++|++++|+.          +.+++..++++..+.++.+++||++++++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            45778999999999999999999999999999999999984          45666777777777788899999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEECC-CCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcC
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNA-AVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIA  149 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~a-g~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~  149 (255)
                      ++++++++.+.+|++|++|||| |...   ...++.+.+.++|++++++|+.+++.++++++|+|++  +++||++||..
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~  161 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGT  161 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcc
Confidence            9999999999999999999999 7531   1256778889999999999999999999999999953  47999999976


Q ss_pred             ccC---CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCC-CCCCCCh
Q 025259          150 GYQ---PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTL-LNRLGTT  222 (255)
Q Consensus       150 ~~~---~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~  222 (255)
                      +..   +.++...|++||+|+.+|+++++.|+++ |||||+|+||+++|++......  .....+.. ...| .++..+|
T Consensus       162 ~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~p  240 (305)
T PRK08303        162 AEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAISETP  240 (305)
T ss_pred             ccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccCCCH
Confidence            643   3345678999999999999999999999 9999999999999998654321  11122222 2345 4677899


Q ss_pred             HHHHHHHHHhcCCCC-CCccccEEe
Q 025259          223 GNMAAAIAFLASDDA-SYITGETLV  246 (255)
Q Consensus       223 ~~va~~~~~l~s~~~-~~~~G~~i~  246 (255)
                      +|+|+.+.||+++.. .++||++|.
T Consensus       241 eevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        241 RYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHHcCcchhhcCCcEEE
Confidence            999999999999874 689999876

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.6e-43  Score=292.03  Aligned_cols=245  Identities=32%  Similarity=0.475  Sum_probs=223.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...  +.++.++.+|++++++++++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888888765  5689999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +.++++|++|||+|... ..+..+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus        84 ~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~  162 (257)
T PRK09242         84 DHWDGLHILVNNAGGNI-RKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGM  162 (257)
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHH
Confidence            99999999999999864 66788899999999999999999999999999985  3579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|++++.++++++.|+.+ +|++++|.||+++|++.......++..+......|.++..+|+|+++.+.||+++...+++
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~  242 (257)
T PRK09242        163 TKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAAVAFLCMPAASYIT  242 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccccc
Confidence            999999999999999988 9999999999999999876655566666666777889999999999999999998888999


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+.+|||..
T Consensus       243 g~~i~~~gg~~  253 (257)
T PRK09242        243 GQCIAVDGGFL  253 (257)
T ss_pred             CCEEEECCCeE
Confidence            99999999975

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.2e-43  Score=290.83  Aligned_cols=241  Identities=25%  Similarity=0.382  Sum_probs=214.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.+.+.++.++++|++++++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            68999999999999999999999999999999999888888888877667889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|||+|... ..++.+.+.++|++++++|+.+++.++++++++|.   +.++||++||..+..+.++...|++||++++
T Consensus        81 ~lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~  159 (252)
T PRK07677         81 ALINNAAGNF-ICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVL  159 (252)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHH
Confidence            9999999754 56778899999999999999999999999999874   2479999999999888888899999999999


Q ss_pred             HHHHHHHHHhCC--CcEEEEEeCCcccCh-hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          169 GLTKALAAEMAP--DTRVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       169 ~l~~~la~e~~~--~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +|+++++.|+.+  ||||++|+||+++|+ +.......++..+......+.+++.+|+|+++.+.||+++.+.++||+++
T Consensus       160 ~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  239 (252)
T PRK07677        160 AMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGLAYFLLSDEAAYINGTCI  239 (252)
T ss_pred             HHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccccCCCEE
Confidence            999999999974  999999999999954 33222233444455566678889999999999999999998899999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.++
T Consensus       240 ~~~gg~~~  247 (252)
T PRK07677        240 TMDGGQWL  247 (252)
T ss_pred             EECCCeec
Confidence            99999875

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=3.3e-43  Score=292.22  Aligned_cols=243  Identities=32%  Similarity=0.470  Sum_probs=214.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||+++||++++++|+++|++|++++|+.+..++..+++   +.++.++++|++++++++.+++++.+++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEI---GPAAIAVSLDVTRQDSIDRIVAAAVERF   78 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4688999999999999999999999999999999999998877766554   3468889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.+.|.+   +++||++||..+..+.++...|++||
T Consensus        79 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  157 (257)
T PRK07067         79 GGIDILFNNAALFD-MAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK  157 (257)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence            99999999999864 567888999999999999999999999999998843   36899999998888889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ++++.++++++.|+.+ +|++++|.||+++|++.....         ...+.........|.+++.+|+|+|+++.||++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s  237 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLAS  237 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHhC
Confidence            9999999999999988 999999999999999764321         112233344566788999999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +...+++|++|++|||..++
T Consensus       238 ~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        238 ADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             cccccccCcEEeecCCEeCC
Confidence            99999999999999997653

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.2e-43  Score=291.46  Aligned_cols=248  Identities=32%  Similarity=0.444  Sum_probs=219.0

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +++|+++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++
T Consensus         1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~   80 (264)
T PRK07576          1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQI   80 (264)
T ss_pred             CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHH
Confidence            35667899999999999999999999999999999999999998888877777776667888999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+ ++++||++||..+..+.++...|++
T Consensus        81 ~~~~~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~a  159 (264)
T PRK07576         81 ADEFGPIDVLVSGAAGNF-PAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCA  159 (264)
T ss_pred             HHHcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHH
Confidence            999999999999999764 56778889999999999999999999999999885 4579999999998888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +|++++.|+++++.|+.+ +|+|+.|.||+++ |+......+............|.++...|+|+|+.+.+++++...++
T Consensus       160 sK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  239 (264)
T PRK07576        160 AKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANAALFLASDMASYI  239 (264)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcCc
Confidence            999999999999999988 9999999999997 66444333333333344455678889999999999999999888999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.+.+|||..
T Consensus       240 ~G~~~~~~gg~~  251 (264)
T PRK07576        240 TGVVLPVDGGWS  251 (264)
T ss_pred             cCCEEEECCCcc
Confidence            999999999975

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8e-43  Score=290.80  Aligned_cols=244  Identities=31%  Similarity=0.490  Sum_probs=213.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||+++||++++++|+++|++|++++|+++ .++..+++.+.+.++.++.||++++++++++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999875 445555565556678899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCc-cCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAG-YQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~-~~~~~~~~~y~~sK  164 (255)
                      +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+++.|+++  +.++||++||..+ ..+.+++..|+++|
T Consensus        81 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK  159 (263)
T PRK08226         81 GRIDILVNNAGVCR-LGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTK  159 (263)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHH
Confidence            99999999999865 67788889999999999999999999999999874  3578999999887 45667888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +++++++++++.++.+ +|+|++|+||+++|++.....      ...+.........|.+++.+|+|+|+.+.||+++.+
T Consensus       160 ~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~~~~l~~~~~  239 (263)
T PRK08226        160 AAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLASDES  239 (263)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCHHHHHHHHHHHcCchh
Confidence            9999999999999988 999999999999999875432      122344555566788899999999999999999999


Q ss_pred             CCccccEEeeCCCccC
Q 025259          238 SYITGETLVVAGGMAS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      .++||+++.+|||.++
T Consensus       240 ~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        240 SYLTGTQNVIDGGSTL  255 (263)
T ss_pred             cCCcCceEeECCCccc
Confidence            9999999999999864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=6.5e-43  Score=290.87  Aligned_cols=244  Identities=34%  Similarity=0.456  Sum_probs=209.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |..++++|++|||||++|||++++++|+++|++|++++|++ ..++..+++...+.++.++.+|+++++++.++++++.+
T Consensus         2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (260)
T PRK12823          2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSE-LVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVE   80 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCch-HHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHH
Confidence            45668899999999999999999999999999999999985 34566677766677888999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.+++.++|+|++  .++||++||..+..  ++...|++|
T Consensus        81 ~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~--~~~~~Y~~s  158 (260)
T PRK12823         81 AFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRG--INRVPYSAA  158 (260)
T ss_pred             HcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccC--CCCCccHHH
Confidence            99999999999996544567888999999999999999999999999999853  46899999987642  345689999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh------cC-----CHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL------LG-----NDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~------~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      |++++.|+++++.|+++ +|+|++|+||+++|++....      ..     .+++........|.+++.+|+|+|+++.|
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~  238 (260)
T PRK12823        159 KGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLMKRYGTIDEQVAAILF  238 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCcccCCCHHHHHHHHHH
Confidence            99999999999999998 99999999999999863211      00     11233444556788899999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCcc
Q 025259          232 LASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      |+++.+.+++|+++.+|||..
T Consensus       239 l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        239 LASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HcCcccccccCcEEeecCCCC
Confidence            999988999999999999963

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-43  Score=290.22  Aligned_cols=241  Identities=31%  Similarity=0.475  Sum_probs=216.0

Q ss_pred             cCCCCEEEEeCCCC-chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cC-CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQ-GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LG-IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~-giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++|+++||||+| |||++++++|+++|++|++++|+.+.+++..+++++ .+ .++.++++|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            35689999999985 999999999999999999999999888888888866 34 4788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|++|||+|... ..++.+.+.++|++.+++|+.+++.+++++.|+|++   .++||+++|..+..+.++...|++
T Consensus        94 ~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  172 (262)
T PRK07831         94 RLGRLDVLVNNAGLGG-QTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAA  172 (262)
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHH
Confidence            9999999999999764 677889999999999999999999999999998852   578999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++++++++.|+++ +||||+|.||+++|++..... .++..+......+.++..+|+|+|+.+.||+++.+.++|
T Consensus       173 sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~~va~~~~~l~s~~~~~it  251 (262)
T PRK07831        173 AKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT-SAELLDELAAREAFGRAAEPWEVANVIAFLASDYSSYLT  251 (262)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcC
Confidence            999999999999999998 999999999999999865432 334445555667889999999999999999999999999


Q ss_pred             ccEEeeCCCc
Q 025259          242 GETLVVAGGM  251 (255)
Q Consensus       242 G~~i~~dgG~  251 (255)
                      |+++.+|+|+
T Consensus       252 G~~i~v~~~~  261 (262)
T PRK07831        252 GEVVSVSSQH  261 (262)
T ss_pred             CceEEeCCCC
Confidence            9999999975

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.4e-43  Score=290.68  Aligned_cols=241  Identities=34%  Similarity=0.521  Sum_probs=206.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|+++||||++|||++++++|+++|++|+++.++.+..   .++++..  ++.++.+|++++++++++++++.+.
T Consensus         2 ~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~---~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~   76 (255)
T PRK06463          2 SMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENE---AKELREK--GVFTIKCDVGNRDQVKKSKEVVEKE   76 (255)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHH---HHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHH
Confidence            3567899999999999999999999999999998887665432   2233332  4678999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC-CCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ-PPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~-~~~~~~~y~~s  163 (255)
                      ++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|.|+  +.++||++||..+.. +.++...|++|
T Consensus        77 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         77 FGRVDVLVNNAGIMY-LMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             cCCCCEEEECCCcCC-CCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            999999999999864 56788889999999999999999999999999985  457999999998874 45677889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      |+|+++|+++++.|+.+ +|+||+|.||+++|++.......   ....+......+.+++.+|+|+|+.+.||+++.+.+
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  235 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDIANIVLFLASDDARY  235 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHHHHHHHHHcChhhcC
Confidence            99999999999999998 99999999999999987543222   223445556678889999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +||+.+.+|||...
T Consensus       236 ~~G~~~~~dgg~~~  249 (255)
T PRK06463        236 ITGQVIVADGGRID  249 (255)
T ss_pred             CCCCEEEECCCeee
Confidence            99999999999864

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.8e-46  Score=276.75  Aligned_cols=240  Identities=30%  Similarity=0.393  Sum_probs=217.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |..+|.|+.++|||+.-|||++++..|++.|+.|+.+.|+++.+..+.++.   ...++++..|+++.+.+.+++..+  
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~---p~~I~Pi~~Dls~wea~~~~l~~v--   75 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET---PSLIIPIVGDLSAWEALFKLLVPV--   75 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC---CcceeeeEecccHHHHHHHhhccc--
Confidence            445789999999999999999999999999999999999999888776654   445889999999988877666644  


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc---cCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l---~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                        +++|.+|||||+.- ..++.+.+.++|++.|.+|+++.+.+.|....-+   ...|.||++||.++..+..+...|++
T Consensus        76 --~pidgLVNNAgvA~-~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   76 --FPIDGLVNNAGVAT-NHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             --Cchhhhhccchhhh-cchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence              68999999999875 8899999999999999999999999999855433   13567999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+|+++++++++.|++| +||||+|.|-.|-|.|.++.-+++.....+...+|++++...++|.+++.||+|+.+++.|
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lfLLSd~ssmtt  232 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLFLLSDNSSMTT  232 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhheeeeecCcCccc
Confidence            999999999999999999 9999999999999999998888888888888999999999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |.++.++|||+-
T Consensus       233 GstlpveGGfs~  244 (245)
T KOG1207|consen  233 GSTLPVEGGFSN  244 (245)
T ss_pred             CceeeecCCccC
Confidence            999999999984

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-42  Score=289.86  Aligned_cols=245  Identities=26%  Similarity=0.463  Sum_probs=220.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+.++..+.++.+++||++++++++++++++.+.+
T Consensus         6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   85 (265)
T PRK07097          6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV   85 (265)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            36789999999999999999999999999999999999998888888887777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.+.++++|+|+  +.++||++||..+..+.+++..|+++|+
T Consensus        86 ~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKa  164 (265)
T PRK07097         86 GVIDILVNNAGIIK-RIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKG  164 (265)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHH
Confidence            99999999999875 66788999999999999999999999999999985  3579999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +++.++++++.|+.+ ||+|++|.||+++|++......      .....+......|.+++.+|+|+|+.+.+|+++.+.
T Consensus       165 al~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  244 (265)
T PRK07097        165 GLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDPEDLAGPAVFLASDASN  244 (265)
T ss_pred             HHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCHHHHHHHHHHHhCcccC
Confidence            999999999999998 9999999999999998755432      122333445566778899999999999999999899


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+.+.+|||...
T Consensus       245 ~~~g~~~~~~gg~~~  259 (265)
T PRK07097        245 FVNGHILYVDGGILA  259 (265)
T ss_pred             CCCCCEEEECCCcee
Confidence            999999999999754

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-43  Score=294.63  Aligned_cols=231  Identities=26%  Similarity=0.428  Sum_probs=200.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.+.+++..++++..+.++.+++||++|++++.++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            689999998 699999999996 8999999999988888888888776778899999999999999999998 5689999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------------
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------------  154 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------------  154 (255)
                      ++|||||...        ..++|++++++|+.+++.+++++.|+|++++++|+++|..+..+.                 
T Consensus        79 ~li~nAG~~~--------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~  150 (275)
T PRK06940         79 GLVHTAGVSP--------SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEE  150 (275)
T ss_pred             EEEECCCcCC--------chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhcccccccccc
Confidence            9999999742        236799999999999999999999999877889999998876542                 


Q ss_pred             -------------CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCCCC
Q 025259          155 -------------SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNR  218 (255)
Q Consensus       155 -------------~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~  218 (255)
                                   +++..|++||+|++.++++++.|+++ +||||+|+||+++|++......  ..+..+......|.++
T Consensus       151 ~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r  230 (275)
T PRK06940        151 LLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPAGR  230 (275)
T ss_pred             ccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCccc
Confidence                         24678999999999999999999998 9999999999999998654221  1223344455678899


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.+|+|||+.+.||+++.+.++||+.+.+|||...
T Consensus       231 ~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        231 PGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             CCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            99999999999999999999999999999999763

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=3.4e-43  Score=286.54  Aligned_cols=222  Identities=25%  Similarity=0.342  Sum_probs=200.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+++++++|||||+|||.++|++|+++|++|++++|++++++++.+++++. +.++.++++|++++++++++.+++.+.
T Consensus         2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~   81 (265)
T COG0300           2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKER   81 (265)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhc
Confidence            3467899999999999999999999999999999999999999999999875 688999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      .+.+|+||||||+.. .+++.+.++++.++++++|+.+++.++++++|.|.  ..|.||+++|.+++.|.|..+.|++||
T Consensus        82 ~~~IdvLVNNAG~g~-~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATK  160 (265)
T COG0300          82 GGPIDVLVNNAGFGT-FGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATK  160 (265)
T ss_pred             CCcccEEEECCCcCC-ccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHH
Confidence            889999999999876 88999999999999999999999999999999995  458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++.+|+++|+.|+.+ ||+|.+|+||++.|+|+.....      ......+...+.+|+++|+...+.+...
T Consensus       161 a~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~~~------~~~~~~~~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         161 AFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAKGS------DVYLLSPGELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccccc------ccccccchhhccCHHHHHHHHHHHHhcC
Confidence            9999999999999998 9999999999999999851111      1112224556899999999999888653

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=6.5e-43  Score=317.75  Aligned_cols=241  Identities=31%  Similarity=0.474  Sum_probs=216.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.+|++|||||++|||++++++|+++|++|++++|+++.++++.+++   +.++..+.+|++|+++++++++++.+++|
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g  342 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL---GDEHLSVQADITDEAAVESAFAQIQARWG  342 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEccCCCHHHHHHHHHHHHHHcC
Confidence            357999999999999999999999999999999999988887766544   45677899999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|++.++||++||..+..+.++...|+++|++++
T Consensus       343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~  422 (520)
T PRK06484        343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVT  422 (520)
T ss_pred             CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHH
Confidence            99999999998643467888999999999999999999999999999977789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +|+++++.|+.+ |||||+|+||+++|++....... ....+......|.+++.+|+|+|+.+.||+++...++||+++.
T Consensus       423 ~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~~~~~l~s~~~~~~~G~~i~  502 (520)
T PRK06484        423 MLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAEAIAFLASPAASYVNGATLT  502 (520)
T ss_pred             HHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCcEEE
Confidence            999999999998 99999999999999987654322 2233445566788899999999999999999989999999999


Q ss_pred             eCCCcc
Q 025259          247 VAGGMA  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||+.
T Consensus       503 vdgg~~  508 (520)
T PRK06484        503 VDGGWT  508 (520)
T ss_pred             ECCCcc
Confidence            999975

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=4.6e-42  Score=285.28  Aligned_cols=239  Identities=32%  Similarity=0.446  Sum_probs=213.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|++|||||+++||++++++|+++|++|+++.+ +.+.+++..++++..+.++.++.+|++++++++++++++.++++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988764 5666777788888778889999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      |++|||+|... ..++.+.+.++|++++++|+.+++.+++++.++|.+   .++||++||..+..+.++...|+++|+++
T Consensus        82 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  160 (256)
T PRK12743         82 DVLVNNAGAMT-KAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHAL  160 (256)
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHH
Confidence            99999999865 566788899999999999999999999999998853   46999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++++++++.++.+ +||+++|.||+++|++....  ..+.........+.++..+|+|+++.+.|++++...+++|+++.
T Consensus       161 ~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  238 (256)
T PRK12743        161 GGLTKAMALELVEHGILVNAVAPGAIATPMNGMD--DSDVKPDSRPGIPLGRPGDTHEIASLVAWLCSEGASYTTGQSLI  238 (256)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc--ChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCcCCcEEE
Confidence            9999999999988 99999999999999986532  23333444456678889999999999999999999999999999


Q ss_pred             eCCCccC
Q 025259          247 VAGGMAS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||..+
T Consensus       239 ~dgg~~~  245 (256)
T PRK12743        239 VDGGFML  245 (256)
T ss_pred             ECCCccc
Confidence            9999764

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.6e-42  Score=289.29  Aligned_cols=247  Identities=32%  Similarity=0.489  Sum_probs=218.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +.++++|++|||||+++||.+++++|+++|++|++++|+.+ ..+...+.++..+.++.++.||++++++++++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999864 45566666666677899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.++++++++|++.++||++||..++.+.+.+..|+++|+
T Consensus       121 ~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~  200 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKG  200 (290)
T ss_pred             HcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHH
Confidence            99999999999998654567888999999999999999999999999999877789999999999998889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++.+ +|||++|.||+++|++...... .+.........+.+++..|+|+|++++||+++.+.+++|++
T Consensus       201 a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~ll~~~~~~~~G~~  279 (290)
T PRK06701        201 AIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFD-EEKVSQFGSNTPMQRPGQPEELAPAYVFLASPDSSYITGQM  279 (290)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccC-HHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCcccCCccCcE
Confidence            999999999999988 9999999999999998654322 23334445566788899999999999999999999999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      |.+|||+..+
T Consensus       280 i~idgg~~~~  289 (290)
T PRK06701        280 LHVNGGVIVN  289 (290)
T ss_pred             EEeCCCcccC
Confidence            9999998653

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-41  Score=283.24  Aligned_cols=245  Identities=31%  Similarity=0.456  Sum_probs=218.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++|+++||||+++||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG   81 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            46789999999999999999999999999999999999888888888877777889999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      ++|++|||||......++.+.+.++|++.+++|+.+++.+++++.++|+ ..++||++||..+..+.+++..|+++|+++
T Consensus        82 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~  161 (258)
T PRK07890         82 RVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGAL  161 (258)
T ss_pred             CccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHH
Confidence            9999999999764346778889999999999999999999999999885 346999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +.++++++.|+++ +|+++++.||++.|++.....         +.++.........+.+++.+|+|+++++.+++++..
T Consensus       162 ~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~l~~~~~  241 (258)
T PRK07890        162 LAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRLPTDDEVASAVLFLASDLA  241 (258)
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCccccCCHHHHHHHHHHHcCHhh
Confidence            9999999999988 999999999999999765432         113333444456677889999999999999999888


Q ss_pred             CCccccEEeeCCCccC
Q 025259          238 SYITGETLVVAGGMAS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      .+++|+++.+|||..+
T Consensus       242 ~~~~G~~i~~~gg~~~  257 (258)
T PRK07890        242 RAITGQTLDVNCGEYH  257 (258)
T ss_pred             hCccCcEEEeCCcccc
Confidence            8999999999999764

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=7.6e-42  Score=280.62  Aligned_cols=231  Identities=23%  Similarity=0.313  Sum_probs=199.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+++...   ++++..+  +.++.+|++++++++++++++.+.++++|
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~--~~~~~~D~~~~~~~~~~~~~~~~~~~~id   76 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAI---DGLRQAG--AQCIQADFSTNAGIMAFIDELKQHTDGLR   76 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHHcC--CEEEEcCCCCHHHHHHHHHHHHhhCCCcc
Confidence            679999999999999999999999999999999876432   3333333  56789999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      ++|||||... .....+.+.++|++++++|+.+++.+.+.+.|.|++    .++||++||..+..+.+++..|+++|+++
T Consensus        77 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         77 AIIHNASDWL-AEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEEECCcccc-CCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            9999999754 344567789999999999999999999999999863    36899999999888888899999999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++|+++++.|++++||||+|+||++.++..    ..+..........+.++...|+|+++.+.||++  ..++||++|.+
T Consensus       156 ~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~--~~~~~G~~i~v  229 (236)
T PRK06483        156 DNMTLSFAAKLAPEVKVNSIAPALILFNEG----DDAAYRQKALAKSLLKIEPGEEEIIDLVDYLLT--SCYVTGRSLPV  229 (236)
T ss_pred             HHHHHHHHHHHCCCcEEEEEccCceecCCC----CCHHHHHHHhccCccccCCCHHHHHHHHHHHhc--CCCcCCcEEEe
Confidence            999999999998899999999999977532    122333344456678889999999999999996  57899999999


Q ss_pred             CCCccCC
Q 025259          248 AGGMASR  254 (255)
Q Consensus       248 dgG~~~~  254 (255)
                      |||.++|
T Consensus       230 dgg~~~~  236 (236)
T PRK06483        230 DGGRHLK  236 (236)
T ss_pred             CcccccC
Confidence            9999876

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-41  Score=282.66  Aligned_cols=241  Identities=33%  Similarity=0.468  Sum_probs=211.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||+++||++++++|+++|++|++++|+.+. .+...++.  +.++.++++|++++++++++++++.+.+
T Consensus        11 ~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   87 (255)
T PRK06841         11 FDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEVAAQLL--GGNAKGLVCDVSDSQSVEAAVAAVISAF   87 (255)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHHhh--CCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence            35789999999999999999999999999999999998764 23333332  3456789999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++.|+|+  ..++||++||..+..+.+....|+++|+
T Consensus        88 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  166 (255)
T PRK06841         88 GRIDILVNSAGVAL-LAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKA  166 (255)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHH
Confidence            99999999999875 66778889999999999999999999999999885  3579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+++ +|+|++|.||+++|++...... ....+......|.+++.+|+|+++.+++|+++.+.+++|++
T Consensus       167 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~  245 (255)
T PRK06841        167 GVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA-GEKGERAKKLIPAGRFAYPEEIAAAALFLASDAAAMITGEN  245 (255)
T ss_pred             HHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc-hhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence            999999999999998 9999999999999998654332 22233445567888999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||++.
T Consensus       246 i~~dgg~~~  254 (255)
T PRK06841        246 LVIDGGYTI  254 (255)
T ss_pred             EEECCCccC
Confidence            999999875

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=6.5e-42  Score=287.95  Aligned_cols=244  Identities=34%  Similarity=0.459  Sum_probs=207.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.. +.++.++++|++|+++++++++.+.+.+
T Consensus        14 ~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   92 (280)
T PLN02253         14 QRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGG-EPNVCFFHCDVTVEDDVSRAVDFTVDKF   92 (280)
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcC-CCceEEEEeecCCHHHHHHHHHHHHHHh
Confidence            357899999999999999999999999999999999998877776666632 4578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|+||||||.... ..++.+.+.++|++++++|+.+++.+++++.++|.  +.++||+++|..+..+.++...|+++|
T Consensus        93 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  172 (280)
T PLN02253         93 GTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSK  172 (280)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHH
Confidence            999999999997532 24677889999999999999999999999999884  457999999999988888888999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH----HH----HHhhccCCC-CCCCChHHHHHHHHHhcC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA----VR----KALEGKTLL-NRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~----~~----~~~~~~~~~-~~~~~~~~va~~~~~l~s  234 (255)
                      ++++.++++++.|+++ +|+|++|.||+++|++.....+...    ..    .......+. ++...|+|+|+++.||++
T Consensus       173 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l~s  252 (280)
T PLN02253        173 HAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFLAS  252 (280)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhhcC
Confidence            9999999999999998 9999999999999987543222111    11    111112222 456899999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 025259          235 DDASYITGETLVVAGGMA  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +...+++|+.|.+|||..
T Consensus       253 ~~~~~i~G~~i~vdgG~~  270 (280)
T PLN02253        253 DEARYISGLNLMIDGGFT  270 (280)
T ss_pred             cccccccCcEEEECCchh
Confidence            999999999999999976

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-41  Score=280.54  Aligned_cols=240  Identities=35%  Similarity=0.523  Sum_probs=211.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.+++..+++   +.++.++++|+++.+++..+++.+.+.++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL---GESALVIRADAGDVAAQKALAQALAEAFG   79 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            577999999999999999999999999999999999987766655443   56788899999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.+++|+++|..+..+.++...|+++|++++
T Consensus        80 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~  158 (249)
T PRK06500         80 RLDAVFINAGVAK-FAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALL  158 (249)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHH
Confidence            9999999999765 566778899999999999999999999999999877789999999888888889999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-C---CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-G---NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++++.|+.+ +|++++|.||+++|++..... .   ............|..++.+|+|+|+.+.|++++...+++|+
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  238 (249)
T PRK06500        159 SLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIAKAVLYLASDESAFIVGS  238 (249)
T ss_pred             HHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            999999999987 999999999999999865421 1   12233444556678889999999999999999888999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .|.+|||++
T Consensus       239 ~i~~~gg~~  247 (249)
T PRK06500        239 EIIVDGGMS  247 (249)
T ss_pred             eEEECCCcc
Confidence            999999964

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=1.4e-41  Score=282.17  Aligned_cols=242  Identities=29%  Similarity=0.475  Sum_probs=210.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++|+++||||+++||++++++|+++|++|++++|+++..++..+++   +.++.++++|+++++++.++++++.+++|
T Consensus         7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   83 (255)
T PRK05717          7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL---GENAWFIAMDVADEAQVAAGVAEVLGQFG   83 (255)
T ss_pred             ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999887666544433   45688999999999999999999999999


Q ss_pred             CCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||.... ..++.+.+.++|++.+++|+.+++.+++++.|+|+ +.++||++||..+..+.+....|+++|++
T Consensus        84 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa  163 (255)
T PRK05717         84 RLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGG  163 (255)
T ss_pred             CCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHH
Confidence            99999999998642 25677889999999999999999999999999885 45799999999999998899999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.++++++.++.++|+|++|.||+++|++..... ............+.++..+|+|+++.+.+++++...+++|+.+.
T Consensus       164 ~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~  242 (255)
T PRK05717        164 LLALTHALAISLGPEIRVNAVSPGWIDARDPSQRR-AEPLSEADHAQHPAGRVGTVEDVAAMVAWLLSRQAGFVTGQEFV  242 (255)
T ss_pred             HHHHHHHHHHHhcCCCEEEEEecccCcCCcccccc-chHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCchhcCccCcEEE
Confidence            99999999999987899999999999998754321 12222333345678899999999999999999888899999999


Q ss_pred             eCCCccCC
Q 025259          247 VAGGMASR  254 (255)
Q Consensus       247 ~dgG~~~~  254 (255)
                      +|||+.+.
T Consensus       243 ~~gg~~~~  250 (255)
T PRK05717        243 VDGGMTRK  250 (255)
T ss_pred             ECCCceEE
Confidence            99998753

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-41  Score=279.77  Aligned_cols=246  Identities=26%  Similarity=0.417  Sum_probs=222.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ||.++++|+++||||+++||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (250)
T PRK12939          1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAA   80 (250)
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45668899999999999999999999999999999999999988888888877777899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+++.|++.+  .+++|++||..+..+.++...|+++
T Consensus        81 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~s  159 (250)
T PRK12939         81 ALGGLDGLVNNAGITN-SKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVAS  159 (250)
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHH
Confidence            9999999999999875 567888999999999999999999999999998854  6799999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.+ +|+++.|.||+++|++...... ...........+..++.+|+|+++.+.++++....+++|
T Consensus       160 K~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (250)
T PRK12939        160 KGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA-DERHAYYLKGRALERLQVPDDVAGAVLFLLSDAARFVTG  238 (250)
T ss_pred             HHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC-hHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccCccC
Confidence            99999999999999987 9999999999999998765422 244555566678888999999999999999988889999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.|.+|||+.+
T Consensus       239 ~~i~~~gg~~~  249 (250)
T PRK12939        239 QLLPVNGGFVM  249 (250)
T ss_pred             cEEEECCCccc
Confidence            99999999875

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-41  Score=280.85  Aligned_cols=243  Identities=34%  Similarity=0.516  Sum_probs=219.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|++++++++++++++.+.++
T Consensus         7 ~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (263)
T PRK07814          7 RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFG   86 (263)
T ss_pred             cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999888888888877677888999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++|++|||||... ..++.+.+.+++++++++|+.+++.+.+++.++|.   +.++||++||..+..+.++...|+++|+
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~  165 (263)
T PRK07814         87 RLDIVVNNVGGTM-PNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKA  165 (263)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHH
Confidence            9999999999764 56778899999999999999999999999999884   3478999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++.++++++.|+.++|++++|+||++.|++..................+..+..+|+|+|+.++|++++...+++|+.+
T Consensus       166 a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~  245 (263)
T PRK07814        166 ALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAAAVYLASPAGSYLTGKTL  245 (263)
T ss_pred             HHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcCCCEE
Confidence            99999999999998899999999999999987654334445555556667788899999999999999998899999999


Q ss_pred             eeCCCcc
Q 025259          246 VVAGGMA  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||..
T Consensus       246 ~~~~~~~  252 (263)
T PRK07814        246 EVDGGLT  252 (263)
T ss_pred             EECCCcc
Confidence            9999975

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-41  Score=281.82  Aligned_cols=241  Identities=24%  Similarity=0.434  Sum_probs=216.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+.+.++++.+++...+.+++++.+|+++++++.++++++.+.++
T Consensus         6 ~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   85 (258)
T PRK06949          6 NLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG   85 (258)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            47899999999999999999999999999999999999998888888877667889999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----------CCeEEEEcCcCccCCCCCCh
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----------GSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----------~~~iv~vss~~~~~~~~~~~  158 (255)
                      ++|++|||+|... ..++.+.+.++|+.++++|+.+++.+.+++.|.+.+          .+++|+++|..+..+.+...
T Consensus        86 ~~d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  164 (258)
T PRK06949         86 TIDILVNNSGVST-TQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIG  164 (258)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCcc
Confidence            9999999999864 567778889999999999999999999999987741          36899999999988888899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|+++|++++.++++++.++++ +|+|++|.||+++|++...... ...........+.+++..|+|+++.+.||+++.+
T Consensus       165 ~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~~~~  243 (258)
T PRK06949        165 LYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVSMLPRKRVGKPEDLDGLLLLLAADES  243 (258)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhh
Confidence            9999999999999999999988 9999999999999998764432 2333455667788899999999999999999999


Q ss_pred             CCccccEEeeCCCc
Q 025259          238 SYITGETLVVAGGM  251 (255)
Q Consensus       238 ~~~~G~~i~~dgG~  251 (255)
                      .+++|++|.+|||+
T Consensus       244 ~~~~G~~i~~dgg~  257 (258)
T PRK06949        244 QFINGAIISADDGF  257 (258)
T ss_pred             cCCCCcEEEeCCCC
Confidence            99999999999996

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.8e-41  Score=279.72  Aligned_cols=241  Identities=28%  Similarity=0.383  Sum_probs=206.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++|++|||||++|||++++++|+++|++|+++.+ +.+..+....++   +.++.++.+|++++++++++++++.+.+
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL---GDRAIALQADVTDREQVQAMFATATEHF   78 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            467899999999999999999999999999988655 444444443333   3578889999999999999999999988


Q ss_pred             CC-CcEEEECCCCCC-----CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChh
Q 025259           88 GR-IDVFVLNAAVNP-----YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        88 g~-~d~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      ++ +|++|||||...     ...++.+.+.++|++.+++|+.+++.+++++.|+|.  +.++||+++|..+..+..++..
T Consensus        79 g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~  158 (253)
T PRK08642         79 GKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHD  158 (253)
T ss_pred             CCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccc
Confidence            87 999999998631     124577889999999999999999999999999885  3479999999888777778889


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++|+++++|++++++++++ +||||+|.||+++|+...... .+..........|.+++.+|+|+++.+.||+++.+.
T Consensus       159 Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~  237 (253)
T PRK08642        159 YTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAAT-PDEVFDLIAATTPLRKVTTPQEFADAVLFFASPWAR  237 (253)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccC-CHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCchhc
Confidence            999999999999999999998 999999999999998654332 334445556677889999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+.|.+|||...
T Consensus       238 ~~~G~~~~vdgg~~~  252 (253)
T PRK08642        238 AVTGQNLVVDGGLVM  252 (253)
T ss_pred             CccCCEEEeCCCeec
Confidence            999999999999764

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-41  Score=277.69  Aligned_cols=242  Identities=31%  Similarity=0.478  Sum_probs=216.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++++|+++||||+++||++++++|+++|++|+++.|+. +..++..+++.+.+.++.++.+|++++++++++++++.++
T Consensus         1 ~~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (245)
T PRK12937          1 MTLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETA   80 (245)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999998887754 4456677777777788999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|.|++.++||++||..+..+.+++..|+++|++
T Consensus        81 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a  159 (245)
T PRK12937         81 FGRIDVLVNNAGVMP-LGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAA  159 (245)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHH
Confidence            999999999999864 5677888999999999999999999999999999877899999999998899999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.|+.+ +|+++.|+||+++|++..... .+...+......|.++..+|+|+++.+.|++++.+.+++|+++
T Consensus       160 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~  238 (245)
T PRK12937        160 VEGLVHVLANELRGRGITVNAVAPGPVATELFFNGK-SAEQIDQLAGLAPLERLGTPEEIAAAVAFLAGPDGAWVNGQVL  238 (245)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccC-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccccEE
Confidence            99999999999988 999999999999999864332 2334556667788899999999999999999998899999999


Q ss_pred             eeCCCc
Q 025259          246 VVAGGM  251 (255)
Q Consensus       246 ~~dgG~  251 (255)
                      .+|||.
T Consensus       239 ~~~~g~  244 (245)
T PRK12937        239 RVNGGF  244 (245)
T ss_pred             EeCCCC
Confidence            999996

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.7e-41  Score=278.60  Aligned_cols=243  Identities=33%  Similarity=0.490  Sum_probs=217.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.+++++||||+++||++++++|+++|++|++ ..|+.+..++..+++++.+.++.++.+|+++++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            46799999999999999999999999999776 58888888888888888788899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.+++++  .++||++||..+..+.++...|+++|++
T Consensus        82 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a  160 (250)
T PRK08063         82 RLDVFVNNAASGV-LRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAA  160 (250)
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHH
Confidence            9999999999764 667889999999999999999999999999999853  5699999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.|+++++.++.+ +|++++|.||+++|++..................+.+++.+++|+|+.+++++++...+++|+.+
T Consensus       161 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  240 (250)
T PRK08063        161 LEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANAVLFLCSPEADMIRGQTI  240 (250)
T ss_pred             HHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999987 99999999999999987654444444445555667778999999999999999988889999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.+.
T Consensus       241 ~~~gg~~~  248 (250)
T PRK08063        241 IVDGGRSL  248 (250)
T ss_pred             EECCCeee
Confidence            99999764

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=5.4e-42  Score=286.32  Aligned_cols=237  Identities=32%  Similarity=0.433  Sum_probs=203.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||++|||++++++|+++|++|++++++++..+         ..++.++.+|++++++++++++++.+.+
T Consensus         5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~---------~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (266)
T PRK06171          5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ---------HENYQFVPTDVSSAEEVNHTVAEIIEKF   75 (266)
T ss_pred             ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc---------cCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999876532         2367789999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCC--------CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC
Q 025259           88 GRIDVFVLNAAVNPYA--------ADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~--------~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~  157 (255)
                      +++|++|||||.....        .+..+.+.++|++++++|+.+++.+++++.++|+  +.++||++||..+..+.++.
T Consensus        76 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  155 (266)
T PRK06171         76 GRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQ  155 (266)
T ss_pred             CCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCC
Confidence            9999999999975311        1234678999999999999999999999999985  34789999999999998999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCccc-Chhhhhhc----------CCHHHHHHhhc--cCCCCCCCChH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVP-THFAQALL----------GNDAVRKALEG--KTLLNRLGTTG  223 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~-t~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~  223 (255)
                      ..|+++|+++++|+++++.|+++ +||||+|+||+++ |++.....          ...+..+....  ..|++++.+|+
T Consensus       156 ~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~  235 (266)
T PRK06171        156 SCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLGRSGKLS  235 (266)
T ss_pred             chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccCCCCCCHH
Confidence            99999999999999999999998 9999999999997 55532111          01222333433  67889999999


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |||+++.||+++.+.++||++|.+|||+.+
T Consensus       236 eva~~~~fl~s~~~~~itG~~i~vdgg~~~  265 (266)
T PRK06171        236 EVADLVCYLLSDRASYITGVTTNIAGGKTR  265 (266)
T ss_pred             HhhhheeeeeccccccceeeEEEecCcccC
Confidence            999999999999999999999999999763

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.9e-42  Score=283.04  Aligned_cols=193  Identities=31%  Similarity=0.523  Sum_probs=179.3

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-C-eEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-I-EVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~-~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .+++++||+|+|||||+|||.++|.+|++.|++++++.|..+++++..+++.+.+ . ++++++||++|+++++++++.+
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999999988887763 3 4999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      ...||++|+||||||... .....+.+.+++.+.|++|++|+++++++++|+|+++  |+||++||++++.+.|..+.|+
T Consensus        86 ~~~fg~vDvLVNNAG~~~-~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~  164 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISL-VGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYS  164 (282)
T ss_pred             HHhcCCCCEEEecCcccc-ccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccc
Confidence            999999999999999987 7788899999999999999999999999999999643  9999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-C--cEEEEEeCCcccChhhhhh
Q 025259          162 VTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAQAL  200 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~--i~v~~v~pg~v~t~~~~~~  200 (255)
                      +||+|+.+|..+|+.|+.+ +  |++ .|+||+|+|++....
T Consensus       165 ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  165 ASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             hHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            9999999999999999988 5  667 999999999976544

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-41  Score=279.84  Aligned_cols=244  Identities=30%  Similarity=0.387  Sum_probs=209.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+++.. +..+++...+.++.++.+|++++++++++++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3568899999999999999999999999999999999998776 666777777778999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++++|++|||+|... ...+.+. .++|++.+++|+.+++.+.+.+.|+++ ..++||++||..+..+.+++..|++||+
T Consensus        81 ~~~id~vi~~ag~~~-~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~  158 (258)
T PRK08628         81 FGRIDGLVNNAGVND-GVGLEAG-REAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKG  158 (258)
T ss_pred             cCCCCEEEECCcccC-CCcccCC-HHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHH
Confidence            999999999999754 3344444 499999999999999999999999885 4578999999999998889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---CCH-HHHHHhhccCCC-CCCCChHHHHHHHHHhcCCCCCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---GND-AVRKALEGKTLL-NRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---~~~-~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++++++++++.|+.+ +|+++.|.||+++|++...+.   ..+ ..........+. .++.+|+|+|+.+++++++...+
T Consensus       159 a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  238 (258)
T PRK08628        159 AQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSERSSH  238 (258)
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChhhcc
Confidence            999999999999988 999999999999999865422   111 122222333454 37899999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+.+.+|||.+.
T Consensus       239 ~~g~~~~~~gg~~~  252 (258)
T PRK08628        239 TTGQWLFVDGGYVH  252 (258)
T ss_pred             ccCceEEecCCccc
Confidence            99999999999763

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-41  Score=280.55  Aligned_cols=245  Identities=21%  Similarity=0.375  Sum_probs=202.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC----hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK----QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +++++|+++||||++|||++++++|+++|++|++++++    .+..++..++++..+.++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            45789999999999999999999999999997766543    34455666666666678889999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.+++++++|.....+.+.+..|++|
T Consensus        84 ~~~~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~s  162 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVL-KKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGS  162 (257)
T ss_pred             HHhhCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhh
Confidence            999999999999999864 5677888999999999999999999999999999877888887544433456778899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH--HHHhhccCCCC--CCCChHHHHHHHHHhcCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV--RKALEGKTLLN--RLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++++.|+++++.|+.+ +|+|+++.||+++|++..+.......  ........+..  ++.+|+|+++.+.||+++ ..
T Consensus       163 K~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~-~~  241 (257)
T PRK12744        163 KAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVTD-GW  241 (257)
T ss_pred             HHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhcc-cc
Confidence            99999999999999998 99999999999999976442221110  01111122332  788999999999999985 67


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|+++.+|||+..|
T Consensus       242 ~~~g~~~~~~gg~~~~  257 (257)
T PRK12744        242 WITGQTILINGGYTTK  257 (257)
T ss_pred             eeecceEeecCCccCC
Confidence            8999999999998764

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=6.7e-41  Score=276.49  Aligned_cols=241  Identities=27%  Similarity=0.401  Sum_probs=212.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|+++||||+++||++++++|+++|+.|++. +++.+..++..+++...+.++..+.||++|.++++++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999998874 5556666666677766677888999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||... ..++.+.++++|++++++|+.+++.+.+++.+.+++  .++||++||..+..+.++...|+++|++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a  159 (246)
T PRK12938         81 EIDVLVNNAGITR-DVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAG  159 (246)
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHH
Confidence            9999999999865 567888999999999999999999999999998853  3689999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.++.+ +|++++|.||+++|++....  .++..+......+..++.+|+++++.+.||+++...+++|+.+
T Consensus       160 ~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~l~~~~~~~~~g~~~  237 (246)
T PRK12938        160 IHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADF  237 (246)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhc--ChHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCccCcEE
Confidence            99999999999988 99999999999999987643  2333444555667888999999999999999998999999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||..+
T Consensus       238 ~~~~g~~~  245 (246)
T PRK12938        238 SLNGGLHM  245 (246)
T ss_pred             EECCcccC
Confidence            99999653

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-41  Score=280.24  Aligned_cols=241  Identities=28%  Similarity=0.385  Sum_probs=205.6

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+++..         ...++.+++||++++++++++++++.
T Consensus         2 ~~~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~~~~~~~~~~~~   72 (260)
T PRK06523          2 SFFLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---------LPEGVEFVAADLTTAEGCAAVARAVL   72 (260)
T ss_pred             CcCcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---------cCCceeEEecCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999986531         23467889999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCC-CChhh
Q 025259           85 EKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPS-AMAMY  160 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~-~~~~y  160 (255)
                      +.++++|++|||||... ...++.+.+.++|++.+++|+.+++.+.++++|+|++  .++||++||..+..+.+ +...|
T Consensus        73 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y  152 (260)
T PRK06523         73 ERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAY  152 (260)
T ss_pred             HHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchh
Confidence            99999999999999642 2356777899999999999999999999999999863  47899999999888755 78899


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHH---hhccCCCCCCCChHHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKA---LEGKTLLNRLGTTGNMAA  227 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~~~~va~  227 (255)
                      +++|++++.|+++++.|+.+ +|++++|.||+++|++......         ..+..+.   .....|.+++.+|+|+|+
T Consensus       153 ~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~  232 (260)
T PRK06523        153 AAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEPEEVAE  232 (260)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCccCCCCCHHHHHH
Confidence            99999999999999999998 9999999999999997643211         1111111   123468888999999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+.||+++...+++|+.+.+|||....
T Consensus       233 ~~~~l~s~~~~~~~G~~~~vdgg~~~~  259 (260)
T PRK06523        233 LIAFLASDRAASITGTEYVIDGGTVPT  259 (260)
T ss_pred             HHHHHhCcccccccCceEEecCCccCC
Confidence            999999999999999999999997643

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.6e-41  Score=286.20  Aligned_cols=240  Identities=25%  Similarity=0.374  Sum_probs=207.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .|..++++|+++||||++|||++++++|+++|++|++++++ .+..++..++++..+.++.++.+|++++++++++++++
T Consensus         5 ~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~   84 (306)
T PRK07792          5 TNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATA   84 (306)
T ss_pred             cCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            45577999999999999999999999999999999999885 45667778888777888999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---------CCeEEEEcCcCccCCC
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---------GSSVVFISSIAGYQPP  154 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---------~~~iv~vss~~~~~~~  154 (255)
                      .+ +|++|++|||||... ...+.+.+.++|++.+++|+.+++.+++++.++|++         .++||++||..+..+.
T Consensus        85 ~~-~g~iD~li~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~  162 (306)
T PRK07792         85 VG-LGGLDIVVNNAGITR-DRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGP  162 (306)
T ss_pred             HH-hCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCC
Confidence            98 999999999999875 567788999999999999999999999999998852         2689999999999888


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                      ++...|+++|+++++|+++++.|+.+ ||+||+|+|| ..|+|....... .....      ......+|+++++.+.||
T Consensus       163 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~~~~~~------~~~~~~~pe~va~~v~~L  235 (306)
T PRK07792        163 VGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDAPDVEA------GGIDPLSPEHVVPLVQFL  235 (306)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhccccchhhh------hccCCCCHHHHHHHHHHH
Confidence            89999999999999999999999998 9999999999 488876543221 11100      112245899999999999


Q ss_pred             cCCCCCCccccEEeeCCCccC
Q 025259          233 ASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++.+.+++|+++.+|||...
T Consensus       236 ~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        236 ASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             cCccccCCCCCEEEEcCCeEE
Confidence            999889999999999999764

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1.8e-40  Score=274.43  Aligned_cols=243  Identities=28%  Similarity=0.450  Sum_probs=218.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      |++|++|||||+++||++++++|+++|++|++++|+.+..+++.+++...+.++.++++|++++++++++++.+.+.+++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999999999998888888888777778999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+++.++|++  .++||++||..+..+.++...|+.+|+++
T Consensus        81 ~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~  159 (250)
T TIGR03206        81 VDVLVNNAGWDK-FGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGL  159 (250)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHH
Confidence            999999999864 567788899999999999999999999999998853  46899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc----CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +.++++++.++.+ +|+++.+.||+++|++.....    ........+....+.+++.+|+|+|+.+.+++++...+++|
T Consensus       160 ~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  239 (250)
T TIGR03206       160 VAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDLPGAILFFSSDDASFITG  239 (250)
T ss_pred             HHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHHHHHHHHHcCcccCCCcC
Confidence            9999999999987 999999999999999865532    12334456666778889999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +++.+|||+++
T Consensus       240 ~~~~~~~g~~~  250 (250)
T TIGR03206       240 QVLSVSGGLTM  250 (250)
T ss_pred             cEEEeCCCccC
Confidence            99999999763

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=1e-40  Score=276.28  Aligned_cols=238  Identities=27%  Similarity=0.371  Sum_probs=209.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |.+++++|++|||||+++||++++++|+++|++|++++|+.         +...+.++.++++|++++++++++++++.+
T Consensus         2 ~~~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~---------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   72 (252)
T PRK08220          2 NAMDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF---------LTQEDYPFATFVLDVSDAAAVAQVCQRLLA   72 (252)
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch---------hhhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999986         223356788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||+|... ..++.+.+.+++++.+++|+.+++.+++++.++|+  +.++||++||..+..+.++...|+++
T Consensus        73 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  151 (252)
T PRK08220         73 ETGPLDVLVNAAGILR-MGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGAS  151 (252)
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHH
Confidence            9999999999999865 66788889999999999999999999999999885  44789999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH--------HHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA--------VRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      |++++.++++++.|+.+ +|+|+.+.||+++|++.........        ..+......|.+++..|+|+|++++||++
T Consensus       152 K~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        152 KAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHhc
Confidence            99999999999999988 9999999999999998654322111        12334455678899999999999999999


Q ss_pred             CCCCCccccEEeeCCCccC
Q 025259          235 DDASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+++|+++.+|||.++
T Consensus       232 ~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        232 DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhcCccCcEEEECCCeec
Confidence            9999999999999999764

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1e-40  Score=277.55  Aligned_cols=241  Identities=25%  Similarity=0.303  Sum_probs=211.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|++|||||+++||++++++|+++|++|++++|+.+.+++..+++....  .++.++.||+++++++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999999999999888888777776542  47899999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++.+.|++.+.|++   .++||++||..+..+.+....|++||++
T Consensus        82 id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa  160 (259)
T PRK12384         82 VDLLVYNAGIAK-AAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG  160 (259)
T ss_pred             CCEEEECCCcCC-CCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHH
Confidence            999999999875 677888999999999999999999999999998853   3699999999888888888999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcc-cChhhhhhcC---------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFV-PTHFAQALLG---------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v-~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +++++++++.|+++ ||+|++|.||++ .+++.....+         .++..+......+.+++.+|+|+++++.+|+++
T Consensus       161 ~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~~  240 (259)
T PRK12384        161 GVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYASP  240 (259)
T ss_pred             HHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHcCc
Confidence            99999999999988 999999999975 6666443221         233344445567889999999999999999998


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|++|.+|||...
T Consensus       241 ~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        241 KASYCTGQSINVTGGQVM  258 (259)
T ss_pred             ccccccCceEEEcCCEEe
Confidence            888999999999999763

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1e-40  Score=273.78  Aligned_cols=232  Identities=25%  Similarity=0.475  Sum_probs=197.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|+++.+ +.+..+++.+++   +  ..++.+|+++++++.++++    +
T Consensus         2 ~~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~--~~~~~~D~~~~~~~~~~~~----~   72 (237)
T PRK12742          2 GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---G--ATAVQTDSADRDAVIDVVR----K   72 (237)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---C--CeEEecCCCCHHHHHHHHH----H
Confidence            4578999999999999999999999999999988766 444444443332   2  4567899999998877765    3


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~y~~sKa  165 (255)
                      ++++|++|||||... ..+..+.++++|++++++|+.+++.+.+++.++|++.++||++||..+. .+.++...|+++|+
T Consensus        73 ~~~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKa  151 (237)
T PRK12742         73 SGALDILVVNAGIAV-FGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKS  151 (237)
T ss_pred             hCCCcEEEECCCCCC-CCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHH
Confidence            578999999999864 5567788999999999999999999999999999878899999998884 57788999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++++ +||||+|.||+++|++.....   ...+......+.+++.+|+|+++.+.||+++.+.+++|+.
T Consensus       152 a~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~~~~~~~G~~  228 (237)
T PRK12742        152 ALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG---PMKDMMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAM  228 (237)
T ss_pred             HHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCcccCCE
Confidence            999999999999988 999999999999999864321   2233344556788999999999999999999999999999


Q ss_pred             EeeCCCcc
Q 025259          245 LVVAGGMA  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||+.
T Consensus       229 ~~~dgg~~  236 (237)
T PRK12742        229 HTIDGAFG  236 (237)
T ss_pred             EEeCCCcC
Confidence            99999974

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-40  Score=275.42  Aligned_cols=247  Identities=30%  Similarity=0.469  Sum_probs=216.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ||.++++|++|||||+++||++++++|+++|++|++++|+++..++..+++++.+.++.++.+|++++++++++++++.+
T Consensus         1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   80 (262)
T PRK13394          1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAE   80 (262)
T ss_pred             CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999988888888887777889999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-c--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-Q--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .++++|++|||+|... ..+..+.+.+++++.+++|+.+++.+++++++.+ +  +.++||++||..+..+.++...|++
T Consensus        81 ~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~  159 (262)
T PRK13394         81 RFGSVDILVSNAGIQI-VNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVT  159 (262)
T ss_pred             HcCCCCEEEECCccCC-CCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHH
Confidence            9999999999999864 5677788899999999999999999999999998 4  3468999999998888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------HH-HHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------DA-VRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~~-~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      +|+++++++++++.++.+ +|++++|.||+++|++.......         ++ .........+.+.+.+++|+++++++
T Consensus       160 sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~  239 (262)
T PRK13394        160 AKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLF  239 (262)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999987 99999999999999976433211         11 11223344566789999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccC
Q 025259          232 LASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++.....++|+.|.+|||+.+
T Consensus       240 l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        240 LSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HcCccccCCcCCEEeeCCceec
Confidence            9998778899999999999865

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.9e-40  Score=273.16  Aligned_cols=244  Identities=39%  Similarity=0.630  Sum_probs=217.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++++++|||||+|+||++++++|+++|++|++++|+.+..++..+.+.. +.++.++.||++++++++++++++.++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA-GGRAIAVAADVSDEADVEAAVAAALERFG   80 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            47899999999999999999999999999999999999888877777655 56788999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||+|......++.+.+.++|++.+++|+.+++.+++.+.++++  +.++||++||..+..+.++...|+.+|++
T Consensus        81 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~  160 (251)
T PRK07231         81 SVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGA  160 (251)
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHH
Confidence            9999999999865456678889999999999999999999999999985  44789999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++.++++++.++++ +|+++++.||+++|++.......  ++.........+.+++..|+|+|+++++++++...+++|+
T Consensus       161 ~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  240 (251)
T PRK07231        161 VITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDIANAALFLASDEASWITGV  240 (251)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            99999999999998 99999999999999986654321  2334445566778889999999999999999888899999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      .+.+|||+.+
T Consensus       241 ~~~~~gg~~~  250 (251)
T PRK07231        241 TLVVDGGRCV  250 (251)
T ss_pred             eEEECCCccC
Confidence            9999999865

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3e-40  Score=273.80  Aligned_cols=240  Identities=33%  Similarity=0.532  Sum_probs=215.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+++||||+++||++++++|++.|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            68999999999999999999999999999999988888888888877778999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +|||+|... ..++.+.+.++|++.+++|+.+++.+++.+.+.|++   .++||++||..+..+.+....|+++|++++.
T Consensus        81 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  159 (254)
T TIGR02415        81 MVNNAGVAP-ITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRG  159 (254)
T ss_pred             EEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHH
Confidence            999999865 667889999999999999999999999999998753   3689999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++++++.|+.+ +|+|++|.||+++|++.......         .+..+......+.+++.+|+|+++++.||+++...+
T Consensus       160 ~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~  239 (254)
T TIGR02415       160 LTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVAGLVSFLASEDSDY  239 (254)
T ss_pred             HHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHHHHHHhhcccccCC
Confidence            99999999998 99999999999999986543211         122334455677888999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||+..
T Consensus       240 ~~g~~~~~d~g~~~  253 (254)
T TIGR02415       240 ITGQSILVDGGMVY  253 (254)
T ss_pred             ccCcEEEecCCccC
Confidence            99999999999754

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=4e-40  Score=274.04  Aligned_cols=242  Identities=36%  Similarity=0.566  Sum_probs=214.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||+++||.+++++|+++|++|++++|+.+.++...+++...+.++.+++||++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999999999999988888888887777788899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhc-cc--CCCeEEEEcCcCccCCCCC----Chhh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPH-MQ--KGSSVVFISSIAGYQPPSA----MAMY  160 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-l~--~~~~iv~vss~~~~~~~~~----~~~y  160 (255)
                      +++|++|||+|... ..+..+.+.++|++++++|+.+++.+.+++.++ +.  +.+++|++||..+..+.++    ...|
T Consensus        88 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y  166 (259)
T PRK08213         88 GHVDILVNNAGATW-GAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAY  166 (259)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchH
Confidence            99999999999754 566778899999999999999999999999997 54  3468999999887765543    4889


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +++|++++.++++++.++.+ +|+++.+.||+++|++.....  +...+......+..++.+|+|+++.+.+++++.+.+
T Consensus       167 ~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  244 (259)
T PRK08213        167 NTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL--ERLGEDLLAHTPLGRLGDDEDLKGAALLLASDASKH  244 (259)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999998 999999999999998765432  233344556678888999999999999999999999


Q ss_pred             ccccEEeeCCCcc
Q 025259          240 ITGETLVVAGGMA  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      ++|+.+.+|||++
T Consensus       245 ~~G~~~~~~~~~~  257 (259)
T PRK08213        245 ITGQILAVDGGVS  257 (259)
T ss_pred             ccCCEEEECCCee
Confidence            9999999999985

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-40  Score=273.48  Aligned_cols=246  Identities=29%  Similarity=0.493  Sum_probs=215.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |+++++++++||||+|+||++++++|+++|+.|+++ .|+++.+++..+.+...+.++.++++|++|++++.++++++.+
T Consensus         1 ~~~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~   80 (254)
T PRK12746          1 MKNLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKN   80 (254)
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHH
Confidence            355789999999999999999999999999998764 7888777777777766666788999999999999999999998


Q ss_pred             Hc------CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           86 KY------GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        86 ~~------g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      .+      +++|++|||||... ..++.+.+.+.|++++++|+.+++.+++++.+++++.+++|++||..+..+.+++..
T Consensus        81 ~~~~~~~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~  159 (254)
T PRK12746         81 ELQIRVGTSEIDILVNNAGIGT-QGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIA  159 (254)
T ss_pred             HhccccCCCCccEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcc
Confidence            87      47999999999865 567788899999999999999999999999999877789999999999888899999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++|++++.++++++.++.+ +++++.+.||+++|++.......+..........+.++..+++|+++.+.+++++...
T Consensus       160 Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~  239 (254)
T PRK12746        160 YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVEDIADAVAFLASSDSR  239 (254)
T ss_pred             hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccC
Confidence            999999999999999999988 9999999999999998765544444444444455677888999999999999988778


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|+++.++||+++
T Consensus       240 ~~~g~~~~i~~~~~~  254 (254)
T PRK12746        240 WVTGQIIDVSGGFCL  254 (254)
T ss_pred             CcCCCEEEeCCCccC
Confidence            899999999999763

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.9e-40  Score=272.60  Aligned_cols=238  Identities=27%  Similarity=0.400  Sum_probs=207.0

Q ss_pred             cCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCC-----------hhHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259            9 RFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRK-----------QKNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus         9 ~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      ++++|++|||||++  |||.+++++|+++|++|++++|+           .+......+++...+.++.++++|++++++
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   81 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYA   81 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence            56899999999994  99999999999999999999987           222223555566667789999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCC
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQP  153 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~  153 (255)
                      ++++++++.++++++|++|||||... ..++.+.+++++++.+++|+.+++.+.+++.+.|.  ..++||++||..+..+
T Consensus        82 ~~~~~~~~~~~~g~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~  160 (256)
T PRK12748         82 PNRVFYAVSERLGDPSILINNAAYST-HTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGP  160 (256)
T ss_pred             HHHHHHHHHHhCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCC
Confidence            99999999999999999999999865 66788889999999999999999999999999885  3469999999998888


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                      .++...|+++|+++++++++++.|+.+ +|+|++|.||+++|++...     ..........+..++.+|+|+++.+.|+
T Consensus       161 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-----~~~~~~~~~~~~~~~~~~~~~a~~~~~l  235 (256)
T PRK12748        161 MPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-----ELKHHLVPKFPQGRVGEPVDAARLIAFL  235 (256)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-----hHHHhhhccCCCCCCcCHHHHHHHHHHH
Confidence            888999999999999999999999988 9999999999999987532     1222233445667788999999999999


Q ss_pred             cCCCCCCccccEEeeCCCcc
Q 025259          233 ASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +++...+++|+++.+|||+.
T Consensus       236 ~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        236 VSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             hCcccccccCCEEEecCCcc
Confidence            99988999999999999975

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-40  Score=276.94  Aligned_cols=234  Identities=27%  Similarity=0.398  Sum_probs=204.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-------VDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.       +++..++++..+.++.++++|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            55789999999999999999999999999999999998653       45566667667778999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCC--CC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPP--SA  156 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~--~~  156 (255)
                      +++.+.++++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++  .++|+++||..+..+.  ++
T Consensus        82 ~~~~~~~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~  160 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAIN-LTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAP  160 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcC-CCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCC
Confidence            999999999999999999865 667888999999999999999999999999999853  4789999998887776  78


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCC-cccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      +..|++||++++.|+++++.|+.+ +|+||+|.|| +++|++......         ...+..+..+|+++|+.++++++
T Consensus       161 ~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~---------~~~~~~~~~~p~~va~~~~~l~~  231 (273)
T PRK08278        161 HTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG---------GDEAMRRSRTPEIMADAAYEILS  231 (273)
T ss_pred             cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc---------ccccccccCCHHHHHHHHHHHhc
Confidence            899999999999999999999998 9999999999 689987654321         11245568899999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 025259          235 DDASYITGETLVVAGGMA  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +...++||+.+ +|++..
T Consensus       232 ~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        232 RPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             CccccceeEEE-eccchh
Confidence            98889999988 677654

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-40  Score=274.47  Aligned_cols=246  Identities=30%  Similarity=0.396  Sum_probs=216.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++++|++||||++|+||++++++|+++|++|++++|+.+..+...+++...  +.++.++++|+++++++.++++++.+
T Consensus         3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   82 (276)
T PRK05875          3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATA   82 (276)
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            3477999999999999999999999999999999999988887777777654  35788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +++++|++|||+|......++.+.+.++|++++++|+.+++.+++++.+.|.  +.++|+++||..+..+.++...|+++
T Consensus        83 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  162 (276)
T PRK05875         83 WHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVT  162 (276)
T ss_pred             HcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHH
Confidence            9999999999999764345677889999999999999999999999999884  34799999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.++.+ +||++.|.||+++|++..................+..++.+|+|+++++.|+++....+++|
T Consensus       163 K~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g  242 (276)
T PRK05875        163 KSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVANLAMFLLSDAASWITG  242 (276)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcCchhcCcCC
Confidence            99999999999999987 99999999999999987654433333344455667788999999999999999988889999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +++.+|||...
T Consensus       243 ~~~~~~~g~~~  253 (276)
T PRK05875        243 QVINVDGGHML  253 (276)
T ss_pred             CEEEECCCeec
Confidence            99999999764

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-40  Score=280.29  Aligned_cols=235  Identities=21%  Similarity=0.320  Sum_probs=206.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. +.++..+.||++|+++++++++++.+.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG-DDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC-CCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999999999999988887777643 456778889999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++++|++|||||... ..++.+.++++|++++++|+.+++.+++++.|+|. +.++||++||..+..+.++...|++||+
T Consensus        83 ~g~id~vI~nAG~~~-~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  161 (296)
T PRK05872         83 FGGIDVVVANAGIAS-GGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKA  161 (296)
T ss_pred             cCCCCEEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHH
Confidence            999999999999875 67888999999999999999999999999999884 4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc--CCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK--TLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      ++++|+++++.|+.+ +|+|++++||+++|++.................  .|..+..+|+|+++.+.++++....+++|
T Consensus       162 al~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~i~~~~~~~~~~i~~  241 (296)
T PRK05872        162 GVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAAAFVDGIERRARRVYA  241 (296)
T ss_pred             HHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence            999999999999988 999999999999999977643332222222222  36678899999999999999988877776


Q ss_pred             c
Q 025259          243 E  243 (255)
Q Consensus       243 ~  243 (255)
                      .
T Consensus       242 ~  242 (296)
T PRK05872        242 P  242 (296)
T ss_pred             h
Confidence            4

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=4.8e-40  Score=270.26  Aligned_cols=233  Identities=26%  Similarity=0.436  Sum_probs=206.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++||||++|||++++++|+++|++|++++|. .+.++...+++++.+.++.++++|+++++++..+++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5899999999999999999999999888765 556677778887777789999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH-hccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA-PHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      |||+|... ..++.+.+.++|++++++|+.+++.+.+++. |.++  +.++||++||..+..+.++...|+++|++++++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~  159 (239)
T TIGR01831        81 VLNAGITR-DAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGA  159 (239)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHH
Confidence            99999865 5567788999999999999999999999875 5543  457999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      +++++.|+.+ ||++++|+||+++|++.....   +..+......|.+++.+|+|+++.+.||+++.+.+++|+++.+||
T Consensus       160 ~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~~~~~g  236 (239)
T TIGR01831       160 TKALAVELAKRKITVNCIAPGLIDTEMLAEVE---HDLDEALKTVPMNRMGQPAEVASLAGFLMSDGASYVTRQVISVNG  236 (239)
T ss_pred             HHHHHHHHhHhCeEEEEEEEccCccccchhhh---HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCccCCEEEecC
Confidence            9999999988 999999999999999876432   223334556788899999999999999999999999999999999


Q ss_pred             Cc
Q 025259          250 GM  251 (255)
Q Consensus       250 G~  251 (255)
                      |+
T Consensus       237 g~  238 (239)
T TIGR01831       237 GM  238 (239)
T ss_pred             Cc
Confidence            96

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1e-39  Score=269.01  Aligned_cols=240  Identities=30%  Similarity=0.500  Sum_probs=210.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||+++||++++++|+++|+.|++.+|+.+.+++..+.+   +.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   78 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL---GERVKIFPANLSDRDEVKALGQKAEADL   78 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999999999887777655443   4568889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||||... ..++.+.+.++|++++++|+.+++.+++++.+.+.  +.++||++||..+..+.++...|+++|+
T Consensus        79 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~  157 (245)
T PRK12936         79 EGVDILVNNAGITK-DGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKA  157 (245)
T ss_pred             CCCCEEEECCCCCC-CCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHH
Confidence            99999999999865 56778889999999999999999999999998763  4578999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.+++.++.++.+ ++++++|.||+++|++....  .+...+......+..++.+|+|+++.+.|+++....+++|++
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ia~~~~~l~~~~~~~~~G~~  235 (245)
T PRK12936        158 GMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKL--NDKQKEAIMGAIPMKRMGTGAEVASAVAYLASSEAAYVTGQT  235 (245)
T ss_pred             HHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhccc--ChHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCccccCcCCCE
Confidence            999999999999988 99999999999999986543  222233344566788899999999999999998888999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||+..
T Consensus       236 ~~~~~g~~~  244 (245)
T PRK12936        236 IHVNGGMAM  244 (245)
T ss_pred             EEECCCccc
Confidence            999999753

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=6.1e-40  Score=272.61  Aligned_cols=234  Identities=22%  Similarity=0.299  Sum_probs=200.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGL----EGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~----~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++||||++|||++++++|++    .|++|++++|+++.+++..++++..  +.++.++.+|++++++++++++.+.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    7999999999999999888888763  4578899999999999999999998877


Q ss_pred             CCC----cEEEECCCCCCCCC-CcCC-CCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCCCCCC
Q 025259           88 GRI----DVFVLNAAVNPYAA-DLLK-TKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        88 g~~----d~lv~~ag~~~~~~-~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~~~~~  157 (255)
                      +..    |++|||||...... ...+ .+.++|++++++|+.+++.+++.++|.|++    .++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            643    69999999753222 2232 357899999999999999999999999863    3689999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---CHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---NDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ..|++||+|+++|+++++.|+++ +|+||+|+||+++|+|.....+   .++..+......|.+++.+|+|+|+.+++++
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~eva~~~~~l~  241 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAKGKLVDPKVSAQKLLSLL  241 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence            99999999999999999999998 9999999999999998764321   2344455566678899999999999999999


Q ss_pred             CCCCCCccccEEeeC
Q 025259          234 SDDASYITGETLVVA  248 (255)
Q Consensus       234 s~~~~~~~G~~i~~d  248 (255)
                      + ..+++||+.+...
T Consensus       242 ~-~~~~~~G~~~~~~  255 (256)
T TIGR01500       242 E-KDKFKSGAHVDYY  255 (256)
T ss_pred             h-cCCcCCcceeecc
Confidence            6 4679999998753

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-40  Score=268.93  Aligned_cols=218  Identities=16%  Similarity=0.218  Sum_probs=191.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++..+.||++++++++++++++.+++|
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999999999999999999888887777888999999999999999999999998


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                       ++|++|||||......++.+.++++|.+.+++|+.+++.+++.+.|+|++   .++||++||..+   .+++..|+++|
T Consensus        82 ~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~asK  158 (227)
T PRK08862         82 RAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVESSN  158 (227)
T ss_pred             CCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHHHH
Confidence             99999999986554667889999999999999999999999999999852   479999999754   35678899999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +|+++|+++++.|+.+ +||||+|+||+++|+....   ...+.+..            +|++.++.||++  +.++||+
T Consensus       159 aal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~---~~~~~~~~------------~~~~~~~~~l~~--~~~~tg~  221 (227)
T PRK08862        159 ALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELD---AVHWAEIQ------------DELIRNTEYIVA--NEYFSGR  221 (227)
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccC---HHHHHHHH------------HHHHhheeEEEe--cccccce
Confidence            9999999999999998 9999999999999983211   11111111            799999999996  6799998


Q ss_pred             EEe
Q 025259          244 TLV  246 (255)
Q Consensus       244 ~i~  246 (255)
                      .|.
T Consensus       222 ~~~  224 (227)
T PRK08862        222 VVE  224 (227)
T ss_pred             EEe
Confidence            875

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-39  Score=268.12  Aligned_cols=238  Identities=31%  Similarity=0.437  Sum_probs=206.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |++|||||++|||++++++|+++|++|+++ .|+++.++...++++..+.++..++||++++++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            689999999999999999999999998776 4667777777778877777899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCC-ChhhHHhHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSA-MAMYGVTKT  165 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~-~~~y~~sKa  165 (255)
                      ++|||||......++.+.+.+++++++++|+.+++.+++++.+.+..     .++||++||..+..+.+. +..|++||+
T Consensus        83 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~  162 (248)
T PRK06947         83 ALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKG  162 (248)
T ss_pred             EEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHH
Confidence            99999998654456788899999999999999999999999988742     367999999988777654 568999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++++++++++.++.+ +|+|+.|.||+++|++.... ..++.........|..+..+|||+++.+++++++...+++|++
T Consensus       163 ~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~va~~~~~l~~~~~~~~~G~~  241 (248)
T PRK06947        163 AVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQPGRAARLGAQTPLGRAGEADEVAETIVWLLSDAASYVTGAL  241 (248)
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CCHHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCccccCcCCce
Confidence            999999999999988 99999999999999985432 1223333444566778889999999999999999999999999


Q ss_pred             EeeCCCc
Q 025259          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      |.+|||.
T Consensus       242 ~~~~gg~  248 (248)
T PRK06947        242 LDVGGGR  248 (248)
T ss_pred             EeeCCCC
Confidence            9999983

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=267.16  Aligned_cols=238  Identities=28%  Similarity=0.399  Sum_probs=206.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|++|||||+++||++++++|+++|+.|++++ |+++..+...+.+...+.++.+++||++++++++++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            57999999999999999999999999988876 44556666667777667778899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCC-ChhhHHhH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSA-MAMYGVTK  164 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~-~~~y~~sK  164 (255)
                      |++|||||......++.+.++++|++++++|+.+++.+++++.++|++     .++||++||..+..+.++ +..|+++|
T Consensus        82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06123         82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASK  161 (248)
T ss_pred             CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHH
Confidence            999999998653456778899999999999999999999999998852     358999999988887766 46799999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.++.+ +|+++.|.||++.|++..... .+..........|.++..+|+|+++.+.++++....+++|+
T Consensus       162 aa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~d~a~~~~~l~~~~~~~~~g~  240 (248)
T PRK06123        162 GAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMGRGGTAEEVARAILWLLSDEASYTTGT  240 (248)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCC
Confidence            9999999999999988 999999999999999754322 23334445566788888999999999999999888899999


Q ss_pred             EEeeCCC
Q 025259          244 TLVVAGG  250 (255)
Q Consensus       244 ~i~~dgG  250 (255)
                      .+.+|||
T Consensus       241 ~~~~~gg  247 (248)
T PRK06123        241 FIDVSGG  247 (248)
T ss_pred             EEeecCC
Confidence            9999997

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6e-40  Score=269.03  Aligned_cols=231  Identities=26%  Similarity=0.352  Sum_probs=199.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||++++++|+++|++|++++|+....         ...++.++.+|++++      ++++.+.++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~---------~~~~~~~~~~D~~~~------~~~~~~~~~   66 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD---------LSGNFHFLQLDLSDD------LEPLFDWVP   66 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc---------cCCcEEEEECChHHH------HHHHHHhhC
Confidence            47899999999999999999999999999999999985431         134678899999987      455555678


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||+|......++.+.+.++|++.+++|+.+++.+.+++.|.++  +.++||++||..+..+.++...|+++|++
T Consensus        67 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  146 (235)
T PRK06550         67 SVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHA  146 (235)
T ss_pred             CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHH
Confidence            9999999999754345778889999999999999999999999999885  34789999999999888899999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++++++++.|+.+ +|++++|.||+++|++......+...........|.+++.+|+|+|+.++||+++...+++|+++
T Consensus       147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~s~~~~~~~g~~~  226 (235)
T PRK06550        147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLASGKADYMQGTIV  226 (235)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHcChhhccCCCcEE
Confidence            99999999999988 99999999999999986543333444445556778889999999999999999998899999999


Q ss_pred             eeCCCccCC
Q 025259          246 VVAGGMASR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      .+|||...+
T Consensus       227 ~~~gg~~~~  235 (235)
T PRK06550        227 PIDGGWTLK  235 (235)
T ss_pred             EECCceecC
Confidence            999997653

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-39  Score=267.83  Aligned_cols=243  Identities=34%  Similarity=0.498  Sum_probs=214.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |++++|+++||||+|+||++++++|+++|++|++++|+.+..++..+++. .+.++.+++||++|+++++++++++.+++
T Consensus         1 m~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~   79 (252)
T PRK06138          1 MRLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA-AGGRAFARQGDVGSAEAVEALVDFVAARW   79 (252)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh-cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999888877777665 45678999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||+|... ..++.+.+.+++++.+++|+.+++.+.+.++++|+  +.++|+++||..+..+.++...|+.+|+
T Consensus        80 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         80 GRLDVLVNNAGFGC-GGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHH
Confidence            99999999999865 66778889999999999999999999999999885  3468999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +++.++++++.|+.+ +|+++++.||+++|++......    .+..........+..++.+++|+++.+.+++++...++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~  238 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEEVAQAALFLASDESSFA  238 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999987 9999999999999998654422    22223333344566678899999999999999988999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      +|+.+.+|||.+
T Consensus       239 ~g~~~~~~~g~~  250 (252)
T PRK06138        239 TGTTLVVDGGWL  250 (252)
T ss_pred             cCCEEEECCCee
Confidence            999999999965

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=3.7e-39  Score=266.26  Aligned_cols=241  Identities=29%  Similarity=0.513  Sum_probs=209.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|+++||||+++||++++++|+++|++|+++. |+++..++..+++++.+.++.++++|+++++++.++++++.+.
T Consensus         2 ~~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (247)
T PRK12935          2 VQLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNH   81 (247)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            346799999999999999999999999999988764 4566667777777776778999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||... ..++.+.+.+++++.+++|+.+++.++++++|++.  +.+++|++||..+..+.+++..|+++|
T Consensus        82 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  160 (247)
T PRK12935         82 FGKVDILVNNAGITR-DRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAK  160 (247)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHH
Confidence            999999999999865 56677889999999999999999999999999884  357999999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++++++++.|+.+ +|+++.+.||+++|++....  ............+.+.+..|+|+++.+.++++. ..+++|+
T Consensus       161 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~~~~~-~~~~~g~  237 (247)
T PRK12935        161 AGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV--PEEVRQKIVAKIPKKRFGQADEIAKGVVYLCRD-GAYITGQ  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc--cHHHHHHHHHhCCCCCCcCHHHHHHHHHHHcCc-ccCccCC
Confidence            9999999999999988 99999999999999986543  222333344455667899999999999999975 4589999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      ++++|||+.
T Consensus       238 ~~~i~~g~~  246 (247)
T PRK12935        238 QLNINGGLY  246 (247)
T ss_pred             EEEeCCCcc
Confidence            999999974

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-39  Score=267.43  Aligned_cols=245  Identities=32%  Similarity=0.463  Sum_probs=213.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |+++++|+++||||+++||++++++|+++|++|++++|+++..++..+++...+.++..+.+|++++++++++++++.+.
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   80 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSA   80 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35578999999999999999999999999999999999988888887877766667888999999999999999999999


Q ss_pred             cCCCcEEEECCCCCC--CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           87 YGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++++|+||||||...  ..+++.+.+.+++++.+++|+.+++.+++++.|++.  +.++||++||..++.   +...|++
T Consensus        81 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~  157 (250)
T PRK07774         81 FGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGL  157 (250)
T ss_pred             hCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHH
Confidence            999999999999753  134667889999999999999999999999999885  357999999987654   3567999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||++++.++++++.++.+ +|+++.+.||+++|++..... +...........+.....+|+|+++.+++++++...+.+
T Consensus       158 sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~  236 (250)
T PRK07774        158 AKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVT-PKEFVADMVKGIPLSRMGTPEDLVGMCLFLLSDEASWIT  236 (250)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhhCcC
Confidence            999999999999999987 999999999999999876543 233444455556677788999999999999988777889


Q ss_pred             ccEEeeCCCccCCC
Q 025259          242 GETLVVAGGMASRL  255 (255)
Q Consensus       242 G~~i~~dgG~~~~~  255 (255)
                      |+++++|||.++++
T Consensus       237 g~~~~v~~g~~~~~  250 (250)
T PRK07774        237 GQIFNVDGGQIIRS  250 (250)
T ss_pred             CCEEEECCCeeccC
Confidence            99999999998874

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.2e-39  Score=267.05  Aligned_cols=237  Identities=27%  Similarity=0.471  Sum_probs=208.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++||||+++||++++++|+++|++|++++|+ .+.++...+++....  ..++.+++|++++++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            8999999999999999999999999999998 667777777776542  2456789999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..++.+.+.+++++++++|+.+++.+++.++|.|++  .++||++||..+..+.+++..|+++|++++.
T Consensus        82 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~  160 (251)
T PRK07069         82 VLVNNAGVGS-FGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVAS  160 (251)
T ss_pred             EEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHH
Confidence            9999999865 567888899999999999999999999999999863  4789999999999999999999999999999


Q ss_pred             HHHHHHHHhCC---CcEEEEEeCCcccChhhhhhc---CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          170 LTKALAAEMAP---DTRVNCVAPGFVPTHFAQALL---GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       170 l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++++.|+.+   +|+++.|+||+++|++.....   ..+..........+.+++.+|+|+++.+++|+++...++||+
T Consensus       161 ~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  240 (251)
T PRK07069        161 LTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVAHAVLYLASDESRFVTGA  240 (251)
T ss_pred             HHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHHHHHHHHcCccccCccCC
Confidence            99999999875   499999999999999876432   223344455566778889999999999999999999999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||.+
T Consensus       241 ~i~~~~g~~  249 (251)
T PRK07069        241 ELVIDGGIC  249 (251)
T ss_pred             EEEECCCee
Confidence            999999975

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-39  Score=267.74  Aligned_cols=244  Identities=27%  Similarity=0.420  Sum_probs=215.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+++|+++||||+++||++++++|++.|++ |++++|+.+..+...+++...+.++.++.+|+++++++.++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            5578999999999999999999999999999 999999988887777777666778889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|++|||+|... ..++.+.+.++|++++++|+.+++.+++++++++.+   .+++|++||..+..+.+....|+++
T Consensus        82 ~g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~s  160 (260)
T PRK06198         82 FGRLDALVNAAGLTD-RGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCAS  160 (260)
T ss_pred             hCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHH
Confidence            999999999999865 566778899999999999999999999999998853   3689999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      |+++++++++++.|+.+ +|++++|.||+++|++.....     ....+........+.+++.+++|+++.+.+++++..
T Consensus       161 K~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~  240 (260)
T PRK06198        161 KGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLDPDEVARAVAFLLSDES  240 (260)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcCHHHHHHHHHHHcChhh
Confidence            99999999999999988 999999999999998743211     112333444456677889999999999999999888


Q ss_pred             CCccccEEeeCCCcc
Q 025259          238 SYITGETLVVAGGMA  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      .+++|++|.+|||-+
T Consensus       241 ~~~~G~~~~~~~~~~  255 (260)
T PRK06198        241 GLMTGSVIDFDQSVW  255 (260)
T ss_pred             CCccCceEeECCccc
Confidence            899999999999875

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=4.9e-39  Score=264.91  Aligned_cols=239  Identities=27%  Similarity=0.398  Sum_probs=209.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||||+++||++++++|+++|++|++++|+.+ ..++........+.++.++.+|++++++++++++.+.++++++
T Consensus         2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i   81 (245)
T PRK12824          2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV   81 (245)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            368999999999999999999999999999999854 2333333333345678899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||+|... ..++.+.+.++|++.+++|+.+++.+.++++++++  +.++||++||..+..+.++.+.|+++|++++
T Consensus        82 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~  160 (245)
T PRK12824         82 DILVNNAGITR-DSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMI  160 (245)
T ss_pred             CEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHH
Confidence            99999999865 56788899999999999999999999999999885  4579999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +++++++.++.+ +|+++.+.||+++|++....  .+..........+.+...+++|+++.+.+|+++...+++|+.+.+
T Consensus       161 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~~  238 (245)
T PRK12824        161 GFTKALASEGARYGITVNCIAPGYIATPMVEQM--GPEVLQSIVNQIPMKRLGTPEEIAAAVAFLVSEAAGFITGETISI  238 (245)
T ss_pred             HHHHHHHHHHHHhCeEEEEEEEcccCCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCccCcEEEE
Confidence            999999999988 99999999999999987654  234455566667888899999999999999988888999999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||+.+
T Consensus       239 ~~g~~~  244 (245)
T PRK12824        239 NGGLYM  244 (245)
T ss_pred             CCCeec
Confidence            999865

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=2e-39  Score=294.86  Aligned_cols=241  Identities=33%  Similarity=0.484  Sum_probs=211.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL---GPDHHALAMDVSDEAQIREGFEQLHREFG   78 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEeccCCHHHHHHHHHHHHHHhC
Confidence            457999999999999999999999999999999999988877665554   55778899999999999999999999999


Q ss_pred             CCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCC-eEEEEcCcCccCCCCCChhhHHhH
Q 025259           89 RIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGS-SVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~-~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++|+||||||... ...++.+.+.++|++++++|+.+++.++++++|+|+  +.+ +||++||..+..+.++...|+++|
T Consensus        79 ~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asK  158 (520)
T PRK06484         79 RIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASK  158 (520)
T ss_pred             CCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHH
Confidence            9999999999742 235677899999999999999999999999999984  334 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH-HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +++++|+++++.|+.+ +|||++|+||+++|++......... .........+.+++.+|+++++.+.||+++...+++|
T Consensus       159 aal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~v~~l~~~~~~~~~G  238 (520)
T PRK06484        159 AAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASYITG  238 (520)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccC
Confidence            9999999999999998 9999999999999998765432211 1223344567778899999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||..
T Consensus       239 ~~~~~~gg~~  248 (520)
T PRK06484        239 STLVVDGGWT  248 (520)
T ss_pred             ceEEecCCee
Confidence            9999999975

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-39  Score=266.46  Aligned_cols=244  Identities=32%  Similarity=0.457  Sum_probs=215.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|++|||||+++||++++++|+++|++|++++|+++..++..+++...+.++.++.||++++++++++++.+.+.+++
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999988888888877788999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|++|||+|... ..+..+.+.+++++.+++|+.+++.+++.+++.|+  +.++||++||..+..+.++...|+++|+++
T Consensus        82 ~d~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~  160 (258)
T PRK12429         82 VDILVNNAGIQH-VAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGL  160 (258)
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHH
Confidence            999999999865 66788889999999999999999999999999985  446899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----------HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +.+++.++.|+.+ +|+++.+.||+++|++.......          ...........+.+++.+++|+|+.+.+++++.
T Consensus       161 ~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~  240 (258)
T PRK12429        161 IGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKRFTTVEEIADYALFLASFA  240 (258)
T ss_pred             HHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccccCCHHHHHHHHHHHcCcc
Confidence            9999999999987 99999999999999886532211          111222333445678999999999999999888


Q ss_pred             CCCccccEEeeCCCccCC
Q 025259          237 ASYITGETLVVAGGMASR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      ...++|+.+.+|||++.+
T Consensus       241 ~~~~~g~~~~~~~g~~~~  258 (258)
T PRK12429        241 AKGVTGQAWVVDGGWTAQ  258 (258)
T ss_pred             ccCccCCeEEeCCCEecC
Confidence            888999999999998763

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.2e-39  Score=265.33  Aligned_cols=215  Identities=22%  Similarity=0.366  Sum_probs=195.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++.+|++||||||++|+|+++|.+||+.|+.+++.|.+.+..+++.+++++.| +++.+.||+++.+++.++.+++.++
T Consensus        33 ~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   33 LKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             hhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCHHHHHHHHHHHHHh
Confidence            356889999999999999999999999999999999999999999999998886 8999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|.+|+||||||+.. ..++.+.+.+++++++++|+.|.++++|+++|.|.  ++|+||.++|.+++.+.++...|++||
T Consensus       112 ~G~V~ILVNNAGI~~-~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK  190 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVT-GKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASK  190 (300)
T ss_pred             cCCceEEEecccccc-CCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhH
Confidence            999999999999986 78899999999999999999999999999999984  679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC---C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          165 TALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       165 aa~~~l~~~la~e~~---~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      +|+.+|.+++..|+.   . +|+...|+|++++|+|.....+          ...+-...+|+++|+.++.-+
T Consensus       191 ~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~~----------~~~l~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  191 FAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGATP----------FPTLAPLLEPEYVAKRIVEAI  253 (300)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCCC----------CccccCCCCHHHHHHHHHHHH
Confidence            999999999999985   3 7999999999999999875211          123445778899998887654

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=277.79  Aligned_cols=225  Identities=25%  Similarity=0.332  Sum_probs=198.7

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ||+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++++.+
T Consensus         1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (330)
T PRK06139          1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAAS   80 (330)
T ss_pred             CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|++|||||... .+++.+.+.+++++++++|+.+++.++++++|+|+  ..++||+++|..+..+.+....|++|
T Consensus        81 ~~g~iD~lVnnAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~as  159 (330)
T PRK06139         81 FGGRIDVWVNNVGVGA-VGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSAS  159 (330)
T ss_pred             hcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHH
Confidence            9999999999999875 67889999999999999999999999999999986  34799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |+++.+|+++++.|+.+  +|+|++|+||+++|++.........     ....+...+.+|+++|+.+++++...
T Consensus       160 Kaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~~-----~~~~~~~~~~~pe~vA~~il~~~~~~  229 (330)
T PRK06139        160 KFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYTG-----RRLTPPPPVYDPRRVAKAVVRLADRP  229 (330)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccccc-----ccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999975  7999999999999998643211100     11122344789999999999988643

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-39  Score=265.59  Aligned_cols=241  Identities=28%  Similarity=0.389  Sum_probs=208.7

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |++++++++++++||||+++||+++++.|+++|++|++++|+.+.+++..+..     ...++.+|+++++++.++++. 
T Consensus         1 ~~~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~-   74 (245)
T PRK07060          1 MNMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGET-----GCEPLRLDVGDDAAIRAALAA-   74 (245)
T ss_pred             CCcccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCeEEEecCCCHHHHHHHHHH-
Confidence            56777899999999999999999999999999999999999987766554432     245688999999988887765 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y  160 (255)
                         .+++|++|||+|... ..+..+.+.+++++.+++|+.+++.+.+++.+.+++   .++||++||..+..+.++...|
T Consensus        75 ---~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  150 (245)
T PRK07060         75 ---AGAFDGLVNCAGIAS-LESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAY  150 (245)
T ss_pred             ---hCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHh
Confidence               468999999999865 566777899999999999999999999999998753   2689999999999998999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +++|++++.++++++.++.+ +|+++++.||+++|++.......+..........+.+++.+++|+++.+.+++++...+
T Consensus       151 ~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~  230 (245)
T PRK07060        151 CASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILFLLSDAASM  230 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999988 99999999999999986544444444444555667888999999999999999998899


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+.|.+|||+..|
T Consensus       231 ~~G~~~~~~~g~~~~  245 (245)
T PRK07060        231 VSGVSLPVDGGYTAR  245 (245)
T ss_pred             ccCcEEeECCCccCC
Confidence            999999999998875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=2.6e-39  Score=270.42  Aligned_cols=236  Identities=30%  Similarity=0.385  Sum_probs=193.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHH----HHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHR----KNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~----~~~~~~~~~~   86 (255)
                      ++++||||++|||++++++|+++|++|++++| +++.++...+++... +.++.++++|++|++++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            68999999999999999999999999998765 456777777777543 45677899999999865    5666666677


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEEcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKE-----------SVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~vss  147 (255)
                      ++++|+||||||... ..++.+.+.           ++|.+++++|+.+++.+++++.|+|+.        .++|++++|
T Consensus        82 ~g~iD~lv~nAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s  160 (267)
T TIGR02685        82 FGRCDVLVNNASAFY-PTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCD  160 (267)
T ss_pred             cCCceEEEECCccCC-CCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehh
Confidence            899999999999764 344444333           358999999999999999999998842        257999999


Q ss_pred             cCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCC-CCCChHHH
Q 025259          148 IAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN-RLGTTGNM  225 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v  225 (255)
                      ..+..+.+++..|++||+++++|+++++.|+.+ ||+|++|+||+++++...    .....+......+.. ++.+|+|+
T Consensus       161 ~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~v  236 (267)
T TIGR02685       161 AMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM----PFEVQEDYRRKVPLGQREASAEQI  236 (267)
T ss_pred             hhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc----chhHHHHHHHhCCCCcCCCCHHHH
Confidence            999888889999999999999999999999998 999999999999766321    122222333344554 68899999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          226 AAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.++|++++...+++|+.+.+|||+++
T Consensus       237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       237 ADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHHHHhCcccCCcccceEEECCceec
Confidence            9999999999999999999999999874

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-39  Score=264.70  Aligned_cols=213  Identities=23%  Similarity=0.275  Sum_probs=180.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||++|||++++++|+++|++|++++|+.+.+++..+++     ++.+++||++++++++++++++.+   ++|++
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~-----~~~~~~~D~~~~~~v~~~~~~~~~---~id~l   73 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKEL-----DVDAIVCDNTDPASLEEARGLFPH---HLDTI   73 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCcEEecCCCCHHHHHHHHHHHhh---cCcEE
Confidence            4899999999999999999999999999999988877665544     245788999999999999887653   69999


Q ss_pred             EECCCCCCC---C--CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           94 VLNAAVNPY---A--ADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        94 v~~ag~~~~---~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |||+|....   +  .++.+ +.++|++++++|+.+++.+++++.|+|++.++||++||..    .+....|+++|+|++
T Consensus        74 v~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~  148 (223)
T PRK05884         74 VNVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALS  148 (223)
T ss_pred             EECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHH
Confidence            999985310   1  12333 5789999999999999999999999998789999999975    345688999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|+++++.|+++ +||||+|+||+++|++....           ...|   ..+|+|+++.+.||+++.+.++||+++.+
T Consensus       149 ~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-----------~~~p---~~~~~~ia~~~~~l~s~~~~~v~G~~i~v  214 (223)
T PRK05884        149 NWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-----------SRTP---PPVAAEIARLALFLTTPAARHITGQTLHV  214 (223)
T ss_pred             HHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-----------cCCC---CCCHHHHHHHHHHHcCchhhccCCcEEEe
Confidence            999999999998 99999999999999864321           1122   23899999999999999999999999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||...
T Consensus       215 dgg~~~  220 (223)
T PRK05884        215 SHGALA  220 (223)
T ss_pred             CCCeec
Confidence            999864

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-39  Score=266.25  Aligned_cols=240  Identities=31%  Similarity=0.477  Sum_probs=204.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|+++||||+++||.+++++|+++|++|++++|+.+.++...+++.     ..+++||++++++++++++++.+.+
T Consensus         3 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~   77 (255)
T PRK06057          3 QRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-----GLFVPTDVTDEDAVNALFDTAAETY   77 (255)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-----CcEEEeeCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999877666555442     2568899999999999999999999


Q ss_pred             CCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCC-CCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPP-SAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~-~~~~~y~~s  163 (255)
                      +++|++|||||.... ..++.+.+.+.|++.+++|+.+++.+++.++|+|+  +.++||++||..+..+. ++...|+++
T Consensus        78 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~s  157 (255)
T PRK06057         78 GSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTAS  157 (255)
T ss_pred             CCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHH
Confidence            999999999997532 34567889999999999999999999999999885  35789999998776665 467889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      |++++.++++++.++.+ +|++++|.||+++|++....... +....+.....|.+++.+|+|+++.+.+|+++...+++
T Consensus       158 Kaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~  237 (255)
T PRK06057        158 KGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEIAAAVAFLASDDASFIT  237 (255)
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcc
Confidence            99999999999999988 99999999999999987654321 22222333445778899999999999999999999999


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+.+|||+.
T Consensus       238 g~~~~~~~g~~  248 (255)
T PRK06057        238 ASTFLVDGGIS  248 (255)
T ss_pred             CcEEEECCCee
Confidence            99999999975

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=7.8e-39  Score=265.59  Aligned_cols=237  Identities=24%  Similarity=0.380  Sum_probs=201.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++|+++||||++|||+++++.|+++|++|++++|+++.+++..+++...  +..+.++.||++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999999999998888888877543  2346677999999999999999999999


Q ss_pred             CCCcEEEECCCCCC--CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCC---------
Q 025259           88 GRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPP---------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~---------  154 (255)
                      +++|++||||+...  ...++.+.+.+++++.+++|+.+++.++++++|+|+  +.++||++||..+..+.         
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~  161 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTS  161 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccc
Confidence            99999999998542  134677889999999999999999999999999985  34699999998765431         


Q ss_pred             -CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          155 -SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       155 -~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                       .....|+++|+++++++++++.|+.+ +|+|+++.||++.++..      ...........+..++.+|+|+|+.++++
T Consensus       162 ~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~------~~~~~~~~~~~~~~~~~~~~dva~~~~~l  235 (256)
T PRK09186        162 MTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP------EAFLNAYKKCCNGKGMLDPDDICGTLVFL  235 (256)
T ss_pred             cCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC------HHHHHHHHhcCCccCCCCHHHhhhhHhhe
Confidence             12246999999999999999999988 99999999999987642      12223334445667889999999999999


Q ss_pred             cCCCCCCccccEEeeCCCcc
Q 025259          233 ASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +++...+++|+++.+|||+.
T Consensus       236 ~~~~~~~~~g~~~~~~~g~~  255 (256)
T PRK09186        236 LSDQSKYITGQNIIVDDGFS  255 (256)
T ss_pred             eccccccccCceEEecCCcc
Confidence            99989999999999999975

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.3e-38  Score=261.86  Aligned_cols=238  Identities=30%  Similarity=0.450  Sum_probs=210.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |++|||||+++||++++++|+++|++|+++.| +++..++..+++...+.++.++.+|++++++++++++.+.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            68999999999999999999999999998888 66666666666655566889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..++.+.+.+++++.+++|+.+++.+.+++.+.|++  .++||++||..+..+.+++..|+++|++++.
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~  159 (242)
T TIGR01829        81 VLVNNAGITR-DATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIG  159 (242)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHH
Confidence            9999999865 567788899999999999999999999999999863  4689999999999888999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++++++.++.+ +|+++++.||+++|++.....  +..........+..++.+|+++++.+.||++++..+++|+.|.+|
T Consensus       160 ~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~G~~~~~~  237 (242)
T TIGR01829       160 FTKALAQEGATKGVTVNTISPGYIATDMVMAMR--EDVLNSIVAQIPVGRLGRPEEIAAAVAFLASEEAGYITGATLSIN  237 (242)
T ss_pred             HHHHHHHHhhhhCeEEEEEeeCCCcCccccccc--hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEEEec
Confidence            99999999988 999999999999999865432  334444555677888999999999999999988889999999999


Q ss_pred             CCccC
Q 025259          249 GGMAS  253 (255)
Q Consensus       249 gG~~~  253 (255)
                      ||..+
T Consensus       238 gg~~~  242 (242)
T TIGR01829       238 GGLYM  242 (242)
T ss_pred             CCccC
Confidence            99753

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-38  Score=261.57  Aligned_cols=238  Identities=27%  Similarity=0.434  Sum_probs=207.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++++++|||++++||+++++.|+++|++|++++|+.+.+++..++++..+.++.++.+|++++++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999999999999888888888877778899999999999999999999998889


Q ss_pred             CCcEEEECCCCCCCCCC--------c-CCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCC
Q 025259           89 RIDVFVLNAAVNPYAAD--------L-LKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSA  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~--------~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~  156 (255)
                      ++|++|||+|... ...        + .+.+.++++.++++|+.+++.+.+.+.+.+.   ..+.|+++||.. ..+.++
T Consensus        82 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~  159 (253)
T PRK08217         82 QLNGLINNAGILR-DGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMG  159 (253)
T ss_pred             CCCEEEECCCccC-cCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCC
Confidence            9999999999753 221        1 5778899999999999999999999999884   346788888864 456778


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ...|+++|+++++++++++.++.+ +|+++++.||+++|++....  .+...+......+.+++.+|+|+++.+.++++ 
T Consensus       160 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~-  236 (253)
T PRK08217        160 QTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM--KPEALERLEKMIPVGRLGEPEEIAHTVRFIIE-  236 (253)
T ss_pred             CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHHc-
Confidence            899999999999999999999987 99999999999999987543  34445555666788889999999999999995 


Q ss_pred             CCCCccccEEeeCCCcc
Q 025259          236 DASYITGETLVVAGGMA  252 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~  252 (255)
                       ..+++|++|.+|||+.
T Consensus       237 -~~~~~g~~~~~~gg~~  252 (253)
T PRK08217        237 -NDYVTGRVLEIDGGLR  252 (253)
T ss_pred             -CCCcCCcEEEeCCCcc
Confidence             4678999999999985

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.2e-38  Score=259.10  Aligned_cols=243  Identities=33%  Similarity=0.516  Sum_probs=206.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++++++|||||+++||++++++|+++|++|++..|+ .+........+...+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            56789999999999999999999999999998877654 45555555666666667889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++++|++|||||... ..+..+.+.+++++.+++|+.+++.+++++.|++++.++||++||..++.+.++...|+++|++
T Consensus        82 ~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~  160 (252)
T PRK06077         82 YGVADILVNNAGLGL-FSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAA  160 (252)
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHH
Confidence            999999999999864 5677788899999999999999999999999999877899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH--HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++.++++++.|++++|+++.+.||+++|++........  ..........+.+++.+|+|+|+.++++++.  ...+|++
T Consensus       161 ~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~--~~~~g~~  238 (252)
T PRK06077        161 VINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEFVAAILKI--ESITGQV  238 (252)
T ss_pred             HHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHHHHHHhCc--cccCCCe
Confidence            99999999999988999999999999999864432110  0111112234456789999999999999963  4688999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|+|.++
T Consensus       239 ~~i~~g~~~  247 (252)
T PRK06077        239 FVLDSGESL  247 (252)
T ss_pred             EEecCCeec
Confidence            999999875

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=266.48  Aligned_cols=228  Identities=25%  Similarity=0.388  Sum_probs=195.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|+++++++.++++++.+.
T Consensus         1 ~~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   80 (275)
T PRK05876          1 MDGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRL   80 (275)
T ss_pred             CCCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999998888888877778899999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||||... .+++.+.+.++|++++++|+.+++.++++++|.|.+   .++||++||..+..+.++...|+++
T Consensus        81 ~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         81 LGHVDVVFSNAGIVV-GGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            999999999999865 678889999999999999999999999999998853   4789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH---HH----HHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA---VR----KALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      |+++++|+++++.|+.+ +|+|++|+||+++|++.........   ..    ...........+.+|+|+|+.++..+..
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            99999999999999988 9999999999999997643211000   00    0000011123468999999999877744

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-38  Score=258.77  Aligned_cols=231  Identities=23%  Similarity=0.287  Sum_probs=201.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCC--HHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSN--EQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~--~~~~~~~~~~~   83 (255)
                      |.++++|+++||||+++||++++++|+++|++|++++|+++.++...+++.+. +.++.++.+|+++  .++++++++++
T Consensus         1 ~~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i   80 (239)
T PRK08703          1 MATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATI   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHH
Confidence            45688999999999999999999999999999999999999888888887654 3467788999975  67899999999


Q ss_pred             HHHc-CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~-g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+.+ +++|++|||||......++.+.+.++|++.+++|+.+++.++++++|.|.+  .+++|+++|..+..+.++...|
T Consensus        81 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y  160 (239)
T PRK08703         81 AEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGF  160 (239)
T ss_pred             HHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccch
Confidence            9888 789999999997643467889999999999999999999999999998853  4799999999999998888999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ++||++++.|+++++.|+.+  +|||+.|.||+++|++.....+...          .....+++|+++.++|++++++.
T Consensus       161 ~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  230 (239)
T PRK08703        161 GASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPGEA----------KSERKSYGDVLPAFVWWASAESK  230 (239)
T ss_pred             HHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCCCC----------ccccCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999986  6999999999999997653321110          12356999999999999999999


Q ss_pred             CccccEEee
Q 025259          239 YITGETLVV  247 (255)
Q Consensus       239 ~~~G~~i~~  247 (255)
                      ++||++|.+
T Consensus       231 ~~~g~~~~~  239 (239)
T PRK08703        231 GRSGEIVYL  239 (239)
T ss_pred             CcCCeEeeC
Confidence            999999864

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.6e-38  Score=260.03  Aligned_cols=240  Identities=30%  Similarity=0.471  Sum_probs=206.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|+++||||+++||++++++|+++|++|++++|+. +..++..+.++..+.++.++.+|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            57999999999999999999999999999999864 45556666666666788999999999999999999999999999


Q ss_pred             cEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEEcCcCccCCCCCChhhH
Q 025259           91 DVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        91 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      |++|||+|... ..+++.+.+.++|++.+++|+.+++.+.+++.+.|++        .++||++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            99999999753 2356778899999999999999999999999998852        34699999999998888999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHh-hccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKAL-EGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++|+++++++++++.++.+ +|++++|.||+++|++.....  ....... ....|..++.+|+|+++++.++++....+
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~a~~i~~l~~~~~~~  239 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT--AKYDALIAKGLVPMPRWGEPEDVARAVAALASGDLPY  239 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc--hhHHhhhhhcCCCcCCCcCHHHHHHHHHHHhCCcccc
Confidence            9999999999999999987 999999999999998765431  1111111 22456778899999999999999988889


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||+..
T Consensus       240 ~~G~~~~i~gg~~~  253 (256)
T PRK12745        240 STGQAIHVDGGLSI  253 (256)
T ss_pred             cCCCEEEECCCeec
Confidence            99999999999874

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=3.6e-38  Score=260.49  Aligned_cols=221  Identities=20%  Similarity=0.282  Sum_probs=190.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++++||||++|||++++++|+ +|++|++++|+.+.+++..+++++.+. ++.++.||++|+++++++++++.+.+|++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            479999999999999999999 599999999999999999898887654 578899999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|||||... ..+..+.+.+++++++++|+.+++.+.+.+.|.|.+   +++||++||..+..+.++...|+++|+|++
T Consensus        80 ~lv~nag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~  158 (246)
T PRK05599         80 LAVVAFGILG-DQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLD  158 (246)
T ss_pred             EEEEecCcCC-CchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHH
Confidence            9999999864 445566777888999999999999999999998852   479999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|+++++.|+++ +||||+|+||+++|++.....+             .....+|||+|+.++++++....   +..+.+
T Consensus       159 ~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~~-------------~~~~~~pe~~a~~~~~~~~~~~~---~~~~~~  222 (246)
T PRK05599        159 AFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMKP-------------APMSVYPRDVAAAVVSAITSSKR---STTLWI  222 (246)
T ss_pred             HHHHHHHHHhcCCCceEEEecCCcccchhhcCCCC-------------CCCCCCHHHHHHHHHHHHhcCCC---CceEEe
Confidence            999999999988 9999999999999998643211             11236899999999999976432   445666


Q ss_pred             CCCc
Q 025259          248 AGGM  251 (255)
Q Consensus       248 dgG~  251 (255)
                      +++.
T Consensus       223 ~~~~  226 (246)
T PRK05599        223 PGRL  226 (246)
T ss_pred             CccH
Confidence            6654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.6e-37  Score=256.17  Aligned_cols=242  Identities=38%  Similarity=0.564  Sum_probs=213.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++|++|++|||||+++||++++++|++.|++|+++ +|+++..++..+.+...+.++.++.+|+++++++.++++++.+.
T Consensus         1 ~~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (247)
T PRK05565          1 MKLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEK   80 (247)
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35778999999999999999999999999999988 99988888877777766678899999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++||++|... ..++.+.+.+++++.+++|+.+++.+.+.+.+.+.+  .+++|++||..+..+.+....|+.+|
T Consensus        81 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  159 (247)
T PRK05565         81 FGKIDILVNNAGISN-FGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASK  159 (247)
T ss_pred             hCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHH
Confidence            999999999999874 667788899999999999999999999999998853  46899999999988888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.++++++.++.+ +++++++.||+++|++.....+  ..........+..+..+|+++++.+.++++.....++|+
T Consensus       160 ~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~  237 (247)
T PRK05565        160 GAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE--EDKEGLAEEIPLGRLGKPEEIAKVVLFLASDDASYITGQ  237 (247)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh--HHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999987 9999999999999987655432  122222234556678899999999999999999999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|+|++
T Consensus       238 ~~~~~~~~~  246 (247)
T PRK05565        238 IITVDGGWT  246 (247)
T ss_pred             EEEecCCcc
Confidence            999999975

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-37  Score=256.21  Aligned_cols=238  Identities=23%  Similarity=0.323  Sum_probs=203.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+.+|++|||||+++||++++++|++.|++|+++++ +.+.++...+++...+.++.++.||++|.+++.++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999987766 4556667777776667789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||||... ..++.+.++++|++++++|+.+++.+.+++.++++  ..++||+++|..+..+.+.+..|++||+
T Consensus        86 ~~iD~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~  164 (258)
T PRK09134         86 GPITLLVNNASLFE-YDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKA  164 (258)
T ss_pred             CCCCEEEECCcCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHH
Confidence            99999999999865 56778889999999999999999999999999885  3578999999877777788889999999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++++++++++.++.++|+|++|+||++.|+...   ..... .......+.++..+|+|+|+.++++++.  .+++|+.+
T Consensus       165 a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~---~~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~--~~~~g~~~  238 (258)
T PRK09134        165 ALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQ---SPEDF-ARQHAATPLGRGSTPEEIAAAVRYLLDA--PSVTGQMI  238 (258)
T ss_pred             HHHHHHHHHHHHhcCCcEEEEeecccccCCccc---ChHHH-HHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCCEE
Confidence            999999999999977899999999999886421   11122 2233345677889999999999999974  56899999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.+.
T Consensus       239 ~i~gg~~~  246 (258)
T PRK09134        239 AVDGGQHL  246 (258)
T ss_pred             EECCCeec
Confidence            99999753

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2e-37  Score=255.85  Aligned_cols=239  Identities=31%  Similarity=0.514  Sum_probs=207.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC----ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR----KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .++++++++||||+++||+++++.|+++|++|++++|    +.+..+...+++...+.++.++.+|++++++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999998765    344555566666666778999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHH-hccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA-PHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~-~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+.++++|++|||+|... ..++.+.+.++|++.+++|+.+++.+.+++. +.++  ..+++|++||..+..+.++...|
T Consensus        82 ~~~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y  160 (249)
T PRK12827         82 VEEFGRLDILVNNAGIAT-DAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNY  160 (249)
T ss_pred             HHHhCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchh
Confidence            999899999999999865 5678889999999999999999999999999 5554  33689999999999888899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +.+|++++.++++++.++.+ ++++++++||+++|++......    ..+.....+.....+++|+++.+.+++++...+
T Consensus       161 ~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~  236 (249)
T PRK12827        161 AASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAP----TEHLLNPVPVQRLGEPDEVAALVAFLVSDAASY  236 (249)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccch----HHHHHhhCCCcCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999988 9999999999999997654321    133444556677789999999999999888899


Q ss_pred             ccccEEeeCCCc
Q 025259          240 ITGETLVVAGGM  251 (255)
Q Consensus       240 ~~G~~i~~dgG~  251 (255)
                      ++|+.+.+|||+
T Consensus       237 ~~g~~~~~~~g~  248 (249)
T PRK12827        237 VTGQVIPVDGGF  248 (249)
T ss_pred             ccCcEEEeCCCC
Confidence            999999999996

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=3e-37  Score=255.05  Aligned_cols=244  Identities=34%  Similarity=0.521  Sum_probs=215.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|+++||||++++|++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (251)
T PRK12826          2 RDLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDF   81 (251)
T ss_pred             CCCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999999999888888888887777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y~~sK  164 (255)
                      +++|++|||+|... ..++.+.+.+++++.++.|+.+++.+.+++.+.++  +.+++|++||..+. .+.++...|+.+|
T Consensus        82 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK  160 (251)
T PRK12826         82 GRLDILVANAGIFP-LTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASK  160 (251)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHH
Confidence            99999999999875 56777889999999999999999999999999884  34689999999888 7888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.+++.++.++.+ +++++.+.||+++++....... ...........|.+.+.+++|+++.+.++++....+++|+
T Consensus       161 ~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~g~  239 (251)
T PRK12826        161 AGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD-AQWAEAIAAAIPLGRLGEPEDIAAAVLFLASDEARYITGQ  239 (251)
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCcCCc
Confidence            9999999999999987 9999999999999997654432 1213334455677789999999999999998888889999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      ++.+|||+..
T Consensus       240 ~~~~~~g~~~  249 (251)
T PRK12826        240 TLPVDGGATL  249 (251)
T ss_pred             EEEECCCccC
Confidence            9999999864

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=1.2e-37  Score=289.08  Aligned_cols=246  Identities=27%  Similarity=0.362  Sum_probs=213.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ...+++|++|||||++|||++++++|+++|++|++++|+.+.++...+++...  ..++..+.||++++++++++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999998888877777643  2367889999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +.+|++|++|||||... ..++.+.+.++|+..+++|+.+++.+.+.+.+.|++   .++||++||..+..+.++...|+
T Consensus       489 ~~~g~iDilV~nAG~~~-~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~  567 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIAT-SSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYS  567 (676)
T ss_pred             HhcCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHH
Confidence            99999999999999764 567888899999999999999999999999998853   46899999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccC--hhhhhh----------cCCHHHHHHhhccCCCCCCCChHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPT--HFAQAL----------LGNDAVRKALEGKTLLNRLGTTGNMAAA  228 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t--~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~va~~  228 (255)
                      ++|++++.++++++.|+++ +||||+|+||++.+  .+....          ....+..+......++++..+|+|||++
T Consensus       568 aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v~peDVA~a  647 (676)
T TIGR02632       568 AAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPADIAEA  647 (676)
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence            9999999999999999998 99999999999864  222110          0112233445566788899999999999


Q ss_pred             HHHhcCCCCCCccccEEeeCCCccC
Q 025259          229 IAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.|++++...++||++|.+|||.+.
T Consensus       648 v~~L~s~~~~~~TG~~i~vDGG~~~  672 (676)
T TIGR02632       648 VFFLASSKSEKTTGCIITVDGGVPA  672 (676)
T ss_pred             HHHHhCCcccCCcCcEEEECCCchh
Confidence            9999998888999999999999874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=4.5e-37  Score=253.27  Aligned_cols=242  Identities=36%  Similarity=0.583  Sum_probs=211.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++||||+|+||++++++|+++|++|+++.|+.+ ..+...++++..+.++.++.+|+++++++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999988777654 4556666666667789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++||++|... ..+..+.+.+++++.+++|+.+++.+.+++.+.+.+  .+++|++||..+..+.++...|+.+|+
T Consensus        82 ~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~  160 (248)
T PRK05557         82 GGVDILVNNAGITR-DNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKA  160 (248)
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHH
Confidence            99999999999865 566778889999999999999999999999998853  368999999988888888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.+++.++.++.+ +++++.+.||++++++....  .+..........+.+.+.+++|+++.+.+++.....+++|+.
T Consensus       161 a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~~~~~~~~~g~~  238 (248)
T PRK05557        161 GVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL--PEDVKEAILAQIPLGRLGQPEEIASAVAFLASDEAAYITGQT  238 (248)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc--ChHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcccCCccccE
Confidence            999999999999987 99999999999999876543  233344555566777889999999999999988788899999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||.++
T Consensus       239 ~~i~~~~~~  247 (248)
T PRK05557        239 LHVNGGMVM  247 (248)
T ss_pred             EEecCCccC
Confidence            999999875

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-37  Score=267.18  Aligned_cols=225  Identities=21%  Similarity=0.283  Sum_probs=198.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++..+++|+++||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++.+.+
T Consensus         2 ~~~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~   81 (334)
T PRK07109          2 MLKPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEE   81 (334)
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999999999999999988888899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|++|||+|... ..++.+.+.+++++.+++|+.+++.++++++|+|++  .++||++||..++.+.+....|+++
T Consensus        82 ~~g~iD~lInnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         82 ELGPIDTWVNNAMVTV-FGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             HCCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHH
Confidence            9999999999999865 677889999999999999999999999999999964  5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |+++++|+++++.|+..   +|+++.|+||+++|++......  .   ......+..+..+|+|+|+.++++++..
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~~--~---~~~~~~~~~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWARS--R---LPVEPQPVPPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhhh--h---ccccccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999863   6999999999999997543210  0   0011234456789999999999999764

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-37  Score=254.90  Aligned_cols=239  Identities=28%  Similarity=0.360  Sum_probs=206.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+++||||+++||++++++|+++|++|++++|+.+.++...+.+.  +.++.++++|+++++++..+++++.++++++|
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG--DARFVPVACDLTDAASLAAALANAAAERGPVD   79 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999999999999888877776663  34688999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..++.+.++++|.+.+++|+.+++.+.+++.+.++  +.++||++||..+..+ .+...|+.+|++++.
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~  157 (257)
T PRK07074         80 VLVANAGAAR-AASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIH  157 (257)
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHH
Confidence            9999999865 55677889999999999999999999999999874  3468999999876543 456789999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++++++.++++ +|+|+.+.||+++|++..... ..+..........+...+..++|+++++++|+++...+++|+.+.+
T Consensus       158 ~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~l~~~~~~~~~g~~~~~  237 (257)
T PRK07074        158 YTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAVLFLASPAARAITGVCLPV  237 (257)
T ss_pred             HHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCchhcCcCCcEEEe
Confidence            99999999998 999999999999998754322 1233334444456778899999999999999998888999999999


Q ss_pred             CCCccCC
Q 025259          248 AGGMASR  254 (255)
Q Consensus       248 dgG~~~~  254 (255)
                      |||+...
T Consensus       238 ~~g~~~~  244 (257)
T PRK07074        238 DGGLTAG  244 (257)
T ss_pred             CCCcCcC
Confidence            9998753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.8e-37  Score=275.27  Aligned_cols=237  Identities=27%  Similarity=0.414  Sum_probs=203.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..++++++|||||++|||++++++|+++|++|+++++..  +.+++..++   .+  ...+.||++++++++++++.+.+
T Consensus       206 ~~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~---~~--~~~~~~Dv~~~~~~~~~~~~~~~  280 (450)
T PRK08261        206 RPLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANR---VG--GTALALDITAPDAPARIAEHLAE  280 (450)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHH---cC--CeEEEEeCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999998853  333333322   23  34678999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHh--cccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP--HMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||||+.. ..++.+.+.++|++++++|+.+++.+.+++.+  .+++.++||++||..+..+.+++..|+++
T Consensus       281 ~~g~id~vi~~AG~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~as  359 (450)
T PRK08261        281 RHGGLDIVVHNAGITR-DKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAAS  359 (450)
T ss_pred             hCCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHH
Confidence            9999999999999875 66788899999999999999999999999999  44567899999999999898999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+++++|+++++.++.+ +|++|+|.||+++|++......  ...+......++.+...|+|+++++.||+++.+.++||
T Consensus       360 Kaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~--~~~~~~~~~~~l~~~~~p~dva~~~~~l~s~~~~~itG  437 (450)
T PRK08261        360 KAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF--ATREAGRRMNSLQQGGLPVDVAETIAWLASPASGGVTG  437 (450)
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch--hHHHHHhhcCCcCCCCCHHHHHHHHHHHhChhhcCCCC
Confidence            99999999999999988 9999999999999998754321  11222233456677889999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      ++|.+|||..
T Consensus       438 ~~i~v~g~~~  447 (450)
T PRK08261        438 NVVRVCGQSL  447 (450)
T ss_pred             CEEEECCCcc
Confidence            9999999875

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=8.3e-37  Score=251.93  Aligned_cols=238  Identities=26%  Similarity=0.368  Sum_probs=206.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |++|||||+|+||++++++|+++|++|++ ..|+++..++...+++..+.++.++++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            68999999999999999999999999876 56888777888888877777889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCC-ChhhHHhHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSA-MAMYGVTKT  165 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~-~~~y~~sKa  165 (255)
                      ++|||+|......+..+.+.++|+..+++|+.+++.+++++++.+.+     .+++|++||..+..+.++ +..|+++|+
T Consensus        82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~  161 (247)
T PRK09730         82 ALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKG  161 (247)
T ss_pred             EEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHH
Confidence            99999997644567788899999999999999999999999998742     367999999988877665 467999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.++.+ +|+++++.||+++|++.... ..+..........|..+..+|+|+|+.+.+++++...+++|++
T Consensus       162 ~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~  240 (247)
T PRK09730        162 AIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASG-GEPGRVDRVKSNIPMQRGGQPEEVAQAIVWLLSDKASYVTGSF  240 (247)
T ss_pred             HHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccC-CCHHHHHHHHhcCCCCCCcCHHHHHHHHHhhcChhhcCccCcE
Confidence            999999999999987 99999999999999975432 2233344445556777788999999999999998888999999


Q ss_pred             EeeCCCc
Q 025259          245 LVVAGGM  251 (255)
Q Consensus       245 i~~dgG~  251 (255)
                      +.+|||.
T Consensus       241 ~~~~g~~  247 (247)
T PRK09730        241 IDLAGGK  247 (247)
T ss_pred             EecCCCC
Confidence            9999984

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-36  Score=253.40  Aligned_cols=246  Identities=26%  Similarity=0.432  Sum_probs=211.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +|+..+++|++|||||+|+||++++++|+++|++|++++|+++..++..++....  ++.++.+|+++++++.++++++.
T Consensus         4 ~~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   81 (264)
T PRK12829          4 DLLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA--KVTATVADVADPAQVERVFDTAV   81 (264)
T ss_pred             hHhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcC--ceEEEEccCCCHHHHHHHHHHHH
Confidence            4667789999999999999999999999999999999999988777666555433  67889999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--C-CeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--G-SSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~-~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +.++++|++||++|......+..+.+.+++++++++|+.+++.+.+++.+.+++  . ++|+++||..+..+.+++..|+
T Consensus        82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~  161 (264)
T PRK12829         82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYA  161 (264)
T ss_pred             HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhH
Confidence            999999999999998744667788899999999999999999999999998753  2 5699999988888888889999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------HHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      .+|++++.+++.++.++.. +++++++.||+++|++.......         ...........+..++..++|+++.+.+
T Consensus       162 ~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~  241 (264)
T PRK12829        162 ASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence            9999999999999999877 99999999999999987544321         1122233344566779999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCcc
Q 025259          232 LASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++++.....+|+.+.+|||.+
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HcCccccCccCcEEEeCCCcc
Confidence            998777789999999999986

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=6.6e-37  Score=238.90  Aligned_cols=245  Identities=26%  Similarity=0.338  Sum_probs=218.8

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..|+||++||+|-.  ..|+..||+.|+++|+.+..+..++ ++++-.+++.+.-....+++||++++++++++++++.+
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            56899999999965  6899999999999999999988887 55554444444333467899999999999999999999


Q ss_pred             HcCCCcEEEECCCCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|+|||+.+..+   ..+.+.+.+.+.|...+++..++...+.+++.|+|.++++|+.++=..+....|.+-..+.
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGv  160 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGV  160 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHH
Confidence            9999999999999764   3446788999999999999999999999999999999999999998888888888889999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +||+++.-+|.+|.++++ |||||.|+-||+.|-....+..-.....+.....|+++..++|||.+...||+|+-++.+|
T Consensus       161 AKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~eeVG~tA~fLlSdLssgiT  240 (259)
T COG0623         161 AKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEEVGNTAAFLLSDLSSGIT  240 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHHhhhhHHHHhcchhcccc
Confidence            999999999999999999 9999999999999977666655566677788889999999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||++.||+|++.
T Consensus       241 Gei~yVD~G~~i  252 (259)
T COG0623         241 GEIIYVDSGYHI  252 (259)
T ss_pred             cceEEEcCCcee
Confidence            999999999974

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=2.4e-36  Score=249.36  Aligned_cols=243  Identities=32%  Similarity=0.465  Sum_probs=206.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++++|||||+|+||++++++|+++|++|++++|+ .+..+...+.++.. +..+.++.+|+++++++.++++.+.+.+
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            467999999999999999999999999999999986 44556666666554 3468889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +++|++|||||... ..++.+.+.+++++++++|+.+++.+.+++.|++. +.+.+++++|..+..+.++...|+.+|++
T Consensus        84 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~  162 (249)
T PRK09135         84 GRLDALVNNASSFY-PTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAA  162 (249)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHH
Confidence            99999999999865 56677788899999999999999999999999885 45788888888778888889999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.++++++.++.++++++++.||++++++..... ............+.....+++|+++++.+++.+ ....+|++++
T Consensus       163 ~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~-~~~~~g~~~~  240 (249)
T PRK09135        163 LEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSF-DEEARQAILARTPLKRIGTPEDIAEAVRFLLAD-ASFITGQILA  240 (249)
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEeccccCccccccC-CHHHHHHHHhcCCcCCCcCHHHHHHHHHHHcCc-cccccCcEEE
Confidence            99999999999977899999999999999854332 233334444555677788999999999888865 5668999999


Q ss_pred             eCCCccCCC
Q 025259          247 VAGGMASRL  255 (255)
Q Consensus       247 ~dgG~~~~~  255 (255)
                      +++|...++
T Consensus       241 i~~g~~~~~  249 (249)
T PRK09135        241 VDGGRSLTL  249 (249)
T ss_pred             ECCCeeccC
Confidence            999998764

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=2.5e-37  Score=263.46  Aligned_cols=236  Identities=17%  Similarity=0.149  Sum_probs=194.1

Q ss_pred             EEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           16 VVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        16 lVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      |||||++|||++++++|+++| ++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.++++|+||
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI   80 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV   80 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            699999999999999999999 9999999999888887777755456788899999999999999999998889999999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCC-----------------
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQP-----------------  153 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~-----------------  153 (255)
                      ||||+.....+..+.+.++|++++++|+.|++.++++++|.|++    .++||++||..+..+                 
T Consensus        81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~  160 (308)
T PLN00015         81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRG  160 (308)
T ss_pred             ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhh
Confidence            99998542345667899999999999999999999999999853    379999999876421                 


Q ss_pred             ------------------CCCChhhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcc-cChhhhhhcCCHHHHHHhhc
Q 025259          154 ------------------PSAMAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFV-PTHFAQALLGNDAVRKALEG  212 (255)
Q Consensus       154 ------------------~~~~~~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~  212 (255)
                                        .+++..|++||+|...+++.++.++.+  +|+|++|+||+| .|++.....+..........
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~~~~~  240 (308)
T PLN00015        161 LAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQ  240 (308)
T ss_pred             hhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHHHHHH
Confidence                              124567999999999999999999963  899999999999 78886543211110000011


Q ss_pred             cCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          213 KTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       213 ~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ..+.+++.+|++.|+.+++++++.....+|+.+..||+.
T Consensus       241 ~~~~~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~~  279 (308)
T PLN00015        241 KYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGGS  279 (308)
T ss_pred             HHHhcccccHHHhhhhhhhhccccccCCCccccccCCcc
Confidence            234456789999999999999988778999999998863

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=249.02  Aligned_cols=227  Identities=30%  Similarity=0.454  Sum_probs=195.1

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEE
Q 025259           16 VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVL   95 (255)
Q Consensus        16 lVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~   95 (255)
                      |||||+++||++++++|+++|++|++++|+.+.++...+++++ +.++.++.||+++++++..++++    ++++|++||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~----~~~id~li~   75 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG-GAPVRTAALDITDEAAVDAFFAE----AGPFDHVVI   75 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc-CCceEEEEccCCCHHHHHHHHHh----cCCCCEEEE
Confidence            6999999999999999999999999999998887777666653 56788899999999999888875    478999999


Q ss_pred             CCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHHHH
Q 025259           96 NAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA  175 (255)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la  175 (255)
                      |+|... ..++.+.+.+++++++++|+.+++.+.+  .+.+++.++||++||..++.+.++...|+++|+++++++++++
T Consensus        76 ~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la  152 (230)
T PRK07041         76 TAADTP-GGPVRALPLAAAQAAMDSKFWGAYRVAR--AARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLA  152 (230)
T ss_pred             CCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHH
Confidence            999865 5677788999999999999999999999  4556667899999999999999999999999999999999999


Q ss_pred             HHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          176 AEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       176 ~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .|+.+ ||+++++||+++|++.......  ...........+.++..+|+|+|+++.+|++.  .+++|+++.+|||...
T Consensus       153 ~e~~~-irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~gg~~~  229 (230)
T PRK07041        153 LELAP-VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAAN--GFTTGSTVLVDGGHAI  229 (230)
T ss_pred             HHhhC-ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcC--CCcCCcEEEeCCCeec
Confidence            99976 9999999999999986543221  22233344556777889999999999999974  5799999999999753

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.8e-36  Score=248.32  Aligned_cols=241  Identities=37%  Similarity=0.566  Sum_probs=214.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++++++|||||+++||++++++|+++|+.|++++|+++..+...++++..+.++.++.+|+++++++.++++.+.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            44578999999999999999999999999999999999888888888887778899999999999999999999999899


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++||++|... ..+..+.+.+++++.++.|+.+++.+.+++.++++  +.++||++||..+..+.++...|+.+|++
T Consensus        82 ~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~  160 (246)
T PRK05653         82 ALDILVNNAGITR-DALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAG  160 (246)
T ss_pred             CCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHH
Confidence            9999999999865 56777889999999999999999999999999885  33699999999888888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++.++++++.++.+ +++++++.||++.+++....  .....+......+.+.+.+++|+++.+.+++++....++|+++
T Consensus       161 ~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~~~  238 (246)
T PRK05653        161 VIGFTKALALELASRGITVNAVAPGFIDTDMTEGL--PEEVKAEILKEIPLGRLGQPEEVANAVAFLASDAASYITGQVI  238 (246)
T ss_pred             HHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCccCCEE
Confidence            99999999999987 99999999999999876432  2233444445667788899999999999999988888999999


Q ss_pred             eeCCCcc
Q 025259          246 VVAGGMA  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .++||..
T Consensus       239 ~~~gg~~  245 (246)
T PRK05653        239 PVNGGMY  245 (246)
T ss_pred             EeCCCee
Confidence            9999975

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-36  Score=247.74  Aligned_cols=235  Identities=28%  Similarity=0.382  Sum_probs=204.8

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |++++++|++|||||+|+||++++++|+++|++|++++|+++..++..+++...  ....+.+|++|.++++++++++.+
T Consensus         1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~   78 (239)
T PRK12828          1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPAD--ALRIGGIDLVDPQAARRAVDEVNR   78 (239)
T ss_pred             CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhc--CceEEEeecCCHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999987777666666544  356678999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++||++|... ..+..+.+.+++++.+++|+.+++.+++++.+.++  +.++||++||..+..+.++...|+++
T Consensus        79 ~~~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~s  157 (239)
T PRK12828         79 QFGRLDALVNIAGAFV-WGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAA  157 (239)
T ss_pred             HhCCcCEEEECCcccC-cCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHH
Confidence            9999999999999765 55677788999999999999999999999999874  45799999999999888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.+++.++.++.+ +++++.+.||++.+++.....+..          ....+.+++|+++.+.+++++...+++|
T Consensus       158 k~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~~~~----------~~~~~~~~~dva~~~~~~l~~~~~~~~g  227 (239)
T PRK12828        158 KAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADMPDA----------DFSRWVTPEQIAAVIAFLLSDEAQAITG  227 (239)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcCCch----------hhhcCCCHHHHHHHHHHHhCcccccccc
Confidence            99999999999999887 999999999999998643322111          2334688999999999999887778999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +.+.+|||.++
T Consensus       228 ~~~~~~g~~~~  238 (239)
T PRK12828        228 ASIPVDGGVAL  238 (239)
T ss_pred             eEEEecCCEeC
Confidence            99999999865

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-36  Score=253.99  Aligned_cols=237  Identities=21%  Similarity=0.245  Sum_probs=202.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCe-EEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE-VIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.+ ..++.+|++++++++++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999999999998888888887765543 45678999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|||+|... ..++.+.+.++|++.+++|+.+++.+.++++|.|.+   .++||++||..+..+.++...|+++|++++
T Consensus        81 ~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~  159 (272)
T PRK07832         81 VVMNIAGISA-WGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLR  159 (272)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHH
Confidence            9999999865 667889999999999999999999999999998842   479999999998888889999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +++++++.|+.+ +|+|+.|.||+++|++......     ..+..+.... ...++..+|+|+|+.+++++. ...++++
T Consensus       160 ~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~vA~~~~~~~~-~~~~~~~  237 (272)
T PRK07832        160 GLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD-RFRGHAVTPEKAAEKILAGVE-KNRYLVY  237 (272)
T ss_pred             HHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH-hcccCCCCHHHHHHHHHHHHh-cCCeEEe
Confidence            999999999988 9999999999999998654311     1111111111 124567899999999999995 5678889


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +.+.+++|+.
T Consensus       238 ~~~~~~~~~~  247 (272)
T PRK07832        238 TSPDIRALYW  247 (272)
T ss_pred             cCcchHHHHH
Confidence            9888888865

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-36  Score=251.83  Aligned_cols=235  Identities=26%  Similarity=0.308  Sum_probs=193.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|+++||||+||||++++++|+++|++|++++|+. +..+....+++..+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (248)
T PRK07806          2 GDLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREE   81 (248)
T ss_pred             CCCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            346789999999999999999999999999999999975 3556666677666677889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----CCCCCChhhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----QPPSAMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----~~~~~~~~y~  161 (255)
                      ++++|++|||||... ..   +   .+++..+++|+.+++.+++++.|+|++.++||++||..+.     .+.+.+..|+
T Consensus        82 ~~~~d~vi~~ag~~~-~~---~---~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~  154 (248)
T PRK07806         82 FGGLDALVLNASGGM-ES---G---MDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVA  154 (248)
T ss_pred             CCCCcEEEECCCCCC-CC---C---CCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHH
Confidence            999999999998642 21   1   1245678999999999999999998777899999996553     2334567899


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ++|++++.++++++.|+++ +|+|++|.||++.+++......  .+....  ....|.+++.+|+|+|+++.++++  ..
T Consensus       155 ~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~dva~~~~~l~~--~~  230 (248)
T PRK07806        155 RSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIE--ARREAAGKLYTVSEFAAEVARAVT--AP  230 (248)
T ss_pred             HHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHH--HHHhhhcccCCHHHHHHHHHHHhh--cc
Confidence            9999999999999999998 9999999999999987543221  111111  123567889999999999999997  45


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|++|.++||...
T Consensus       231 ~~~g~~~~i~~~~~~  245 (248)
T PRK07806        231 VPSGHIEYVGGADYF  245 (248)
T ss_pred             ccCccEEEecCccce
Confidence            789999999999763

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=3.8e-36  Score=280.31  Aligned_cols=245  Identities=30%  Similarity=0.472  Sum_probs=215.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+.+|++|||||+|+||++++++|+++|++|++++|+.+.++...+++... .++.++.||++++++++++++++.+.+
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~-~~v~~v~~Dvtd~~~v~~~~~~~~~~~  496 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP-DRALGVACDVTDEAAVQAAFEEAALAF  496 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence            3468999999999999999999999999999999999998888777776554 578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.+++++   +++||++||..+..+.++...|+++|
T Consensus       497 g~iDvvI~~AG~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        497 GGVDIVVSNAGIAI-SGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            99999999999875 678888999999999999999999999999999865   47999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcc--cChhhhhhc----------CCHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFV--PTHFAQALL----------GNDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v--~t~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      ++++.++++++.++++ +|++|.|.||++  .|++.....          ...++.+......+.++...++|+|+++.+
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~  655 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVF  655 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHH
Confidence            9999999999999998 999999999999  777643221          112223345566778889999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccCC
Q 025259          232 LASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++++....++|+++++|||.+..
T Consensus       656 l~s~~~~~~tG~~i~vdgG~~~~  678 (681)
T PRK08324        656 LASGLLSKTTGAIITVDGGNAAA  678 (681)
T ss_pred             HhCccccCCcCCEEEECCCchhc
Confidence            99877788999999999998754

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.2e-36  Score=245.43  Aligned_cols=228  Identities=29%  Similarity=0.393  Sum_probs=195.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+|+++||||+++||++++++|+++|++|++++|+.+.         ...  ..++.+|++++++++++++++.+.+ ++
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~---------~~~--~~~~~~D~~~~~~~~~~~~~~~~~~-~~   69 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID---------DFP--GELFACDLADIEQTAATLAQINEIH-PV   69 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc---------ccC--ceEEEeeCCCHHHHHHHHHHHHHhC-CC
Confidence            47899999999999999999999999999999998753         111  2467899999999999999998876 58


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||+|... ..++.+.+.+++++.+++|+.+++.+.+++.|.|+  +.++||++||.. ..+.++...|+++|++++
T Consensus        70 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~  147 (234)
T PRK07577         70 DAIVNNVGIAL-PQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALV  147 (234)
T ss_pred             cEEEECCCCCC-CCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHH
Confidence            99999999865 56777889999999999999999999999999985  346899999985 446677889999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +++++++.|+.+ +|++++|+||+++|++.....+ .+..........+.++..+|+|+|+.+++++++...+++|+.+.
T Consensus       148 ~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~g~~~~  227 (234)
T PRK07577        148 GCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAIAFLLSDDAGFITGQVLG  227 (234)
T ss_pred             HHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHHHHHhCcccCCccceEEE
Confidence            999999999988 9999999999999998654322 12223334455677788899999999999999888899999999


Q ss_pred             eCCCcc
Q 025259          247 VAGGMA  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       228 ~~g~~~  233 (234)
T PRK07577        228 VDGGGS  233 (234)
T ss_pred             ecCCcc
Confidence            999965

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=9.7e-36  Score=245.97  Aligned_cols=231  Identities=24%  Similarity=0.371  Sum_probs=202.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCC--CHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVS--NEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~--~~~~~~~~~~~~~~   85 (255)
                      .+++|+++||||+++||.+++++|++.|++|++++|+.+.+++..+++++.+ .++.++.+|++  +++++..+++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999999999988888888887654 45677778875  78999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|++|||||......++.+.+.++|++.+++|+.+++.+++++.++|+  +.++||++||..+..+.+++..|++|
T Consensus        89 ~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  168 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVS  168 (247)
T ss_pred             HhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHH
Confidence            9999999999999865456777889999999999999999999999999885  45789999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.++.. +|+++++.||+++|++....++..          ...++.+|+|+++.+.|++++...+++|
T Consensus       169 K~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (247)
T PRK08945        169 KFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFPGE----------DPQKLKTPEDIMPLYLYLMGDDSRRKNG  238 (247)
T ss_pred             HHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcCcc----------cccCCCCHHHHHHHHHHHhCccccccCC
Confidence            99999999999999988 999999999999998754433211          1245789999999999999999999999


Q ss_pred             cEEeeCC
Q 025259          243 ETLVVAG  249 (255)
Q Consensus       243 ~~i~~dg  249 (255)
                      +++...-
T Consensus       239 ~~~~~~~  245 (247)
T PRK08945        239 QSFDAQP  245 (247)
T ss_pred             eEEeCCC
Confidence            9987543

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-36  Score=245.95  Aligned_cols=231  Identities=23%  Similarity=0.270  Sum_probs=199.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|+++||||+++||++++++|+++|++|++++|+++..++..+++++.+.++.++.+|+++++++.++++.+.+.++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            46899999999999999999999999999999999988888888887777789999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||+|... ..++.+.+.+++++++++|+.+++.+++++.++|+  +.++||++||..+..+.+++..|+++|++++
T Consensus        85 d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~  163 (241)
T PRK07454         85 DVLINNAGMAY-TGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALA  163 (241)
T ss_pred             CEEEECCCccC-CCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHH
Confidence            99999999865 56778889999999999999999999999999885  3478999999999989899999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE-Ee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET-LV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~-i~  246 (255)
                      .++++++.++.+ +|++++|.||+++|++........        ........+|+|+|+.+.++++.+...+.+++ +.
T Consensus       164 ~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~~~~--------~~~~~~~~~~~~va~~~~~l~~~~~~~~~~~~~~~  235 (241)
T PRK07454        164 AFTKCLAEEERSHGIRVCTITLGAVNTPLWDTETVQA--------DFDRSAMLSPEQVAQTILHLAQLPPSAVIEDLTLM  235 (241)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCcccCCccccccccc--------ccccccCCCHHHHHHHHHHHHcCCccceeeeEEee
Confidence            999999999988 999999999999999854211110        11123568999999999999997766555544 43


Q ss_pred             eCCC
Q 025259          247 VAGG  250 (255)
Q Consensus       247 ~dgG  250 (255)
                      .++|
T Consensus       236 ~~~~  239 (241)
T PRK07454        236 PSAG  239 (241)
T ss_pred             cCCC
Confidence            3333

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=1.7e-37  Score=241.85  Aligned_cols=227  Identities=29%  Similarity=0.442  Sum_probs=194.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++++||.+++||+.||||++++++|+++|..+.+++-+.|.. +..+++++.  ...+.|++||+++..+++++++++.+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~-~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~   79 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP-EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILA   79 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH-HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHH
Confidence            367899999999999999999999999999988887777764 445666665  36899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-----CCCeEEEEcCcCccCCCCCChhh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-----KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-----~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      ++|.+|++||+||+..         ..+|++.+++|+.|.+.-++..+|+|.     ++|-||++||..+..|.|..+.|
T Consensus        80 ~fg~iDIlINgAGi~~---------dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   80 TFGTIDILINGAGILD---------DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             HhCceEEEEccccccc---------chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            9999999999999864         467999999999999999999999994     45689999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHh--CC-CcEEEEEeCCcccChhhhhhcC------C-HHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          161 GVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAQALLG------N-DAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~--~~-~i~v~~v~pg~v~t~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      ++||+++.+|+||++...  .+ |||+++|+||++.|++......      . +...+.+. .   ....+|.+++..++
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~-~---~~~q~~~~~a~~~v  226 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE-R---APKQSPACCAINIV  226 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH-H---cccCCHHHHHHHHH
Confidence            999999999999998774  34 9999999999999998876621      1 22223222 2   23678999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCc
Q 025259          231 FLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ..+..   ..||+++.+|+|.
T Consensus       227 ~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  227 NAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHhh---ccCCcEEEEecCc
Confidence            88865   5899999999986

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.3e-35  Score=243.11  Aligned_cols=243  Identities=34%  Similarity=0.541  Sum_probs=207.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.+++|++|||||+|+||++++++|+++|++|+++.|+ .+..+...+.++..+.++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (249)
T PRK12825          2 GSLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVER   81 (249)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHH
Confidence            34567899999999999999999999999998775555 44555666666666778899999999999999999999998


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++||++|... ..++.+.+.+++++.+++|+.+++.+.+.+.+++++  .+++|++||..+..+.++...|+.+|
T Consensus        82 ~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK  160 (249)
T PRK12825         82 FGRIDILVNNAGIFE-DKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAK  160 (249)
T ss_pred             cCCCCEEEECCccCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHH
Confidence            899999999999764 666778889999999999999999999999998853  46899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++++++.++.++.+ +++++.+.||++.+++.......... .. ....+..++.+++|+++.+.++++.....++|+
T Consensus       161 ~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~dva~~~~~~~~~~~~~~~g~  238 (249)
T PRK12825        161 AGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEARE-AK-DAETPLGRSGTPEDIARAVAFLCSDASDYITGQ  238 (249)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHH-hh-hccCCCCCCcCHHHHHHHHHHHhCccccCcCCC
Confidence            9999999999999987 99999999999999986554322111 11 224567779999999999999998888889999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.++||...
T Consensus       239 ~~~i~~g~~~  248 (249)
T PRK12825        239 VIEVTGGVDV  248 (249)
T ss_pred             EEEeCCCEee
Confidence            9999999753

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-36  Score=249.83  Aligned_cols=213  Identities=30%  Similarity=0.386  Sum_probs=188.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++++++||||+||||++++++|+++|++|++++|+++.+++..+++.    ++.++.||++++++++++++++.+.++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~   77 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELG----LVVGGPLDVTDPASFAAFLDAVEADLG   77 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----cceEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999999999999999999999999999999999988877666553    477889999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||... ..++.+.+.+++++++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+++|++
T Consensus        78 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  156 (273)
T PRK07825         78 PIDVLVNNAGVMP-VGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHA  156 (273)
T ss_pred             CCCEEEECCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHH
Confidence            9999999999875 677888999999999999999999999999999853  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +++|+++++.|+.+ ||+++.|.||+++|++......           .......+|+|+|+.+++++....
T Consensus       157 ~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~~~~~~~~~~~va~~~~~~l~~~~  217 (273)
T PRK07825        157 VVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-----------AKGFKNVEPEDVAAAIVGTVAKPR  217 (273)
T ss_pred             HHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-----------ccCCCCCCHHHHHHHHHHHHhCCC
Confidence            99999999999988 9999999999999998653311           112246799999999999887643

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.3e-36  Score=249.97  Aligned_cols=218  Identities=28%  Similarity=0.364  Sum_probs=186.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|+++||||+||||++++++|+++|++|++++|+.+.+++..    ..  .+.++.+|++++++++++++++.+.++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~----~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~i   75 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA----SL--GVHPLSLDVTDEASIKAAVDTIIAEEGRI   75 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5799999999999999999999999999999999987765442    22  36788999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... .+++.+.+.+++++.+++|+.+++.+++.++|.|++  .++||++||..+..+.+....|+++|++++
T Consensus        76 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  154 (273)
T PRK06182         76 DVLVNNAGYGS-YGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALE  154 (273)
T ss_pred             CEEEECCCcCC-CCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHH
Confidence            99999999865 677889999999999999999999999999999863  478999999988888888889999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc--------CC--HH----HHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL--------GN--DA----VRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~--------~~--~~----~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      +|+++++.|+.+ +|++++|.||+++|++.....        ..  .+    ..+......+.+++.+|+++|+.+++++
T Consensus       155 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~~  234 (273)
T PRK06182        155 GFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGSGRLSDPSVIADAISKAV  234 (273)
T ss_pred             HHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHH
Confidence            999999999998 999999999999999753110        00  01    1123334446678899999999999999


Q ss_pred             CC
Q 025259          234 SD  235 (255)
Q Consensus       234 s~  235 (255)
                      +.
T Consensus       235 ~~  236 (273)
T PRK06182        235 TA  236 (273)
T ss_pred             hC
Confidence            75

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-35  Score=248.42  Aligned_cols=223  Identities=24%  Similarity=0.324  Sum_probs=194.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+||||++++++|++.|++|++++|+.+.+++..++++..+.++.++.||++++++++.+++.+.+.++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            47999999999999999999999999999999999999988888887888999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      +|||+|... ..++.+.+.++|++++++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+++|++++++
T Consensus        81 lI~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~  159 (270)
T PRK05650         81 IVNNAGVAS-GGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVAL  159 (270)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHH
Confidence            999999875 667888999999999999999999999999999853  46999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++++.|+.+ +|+++.|.||+++|++........................+++|+|+.++..+...
T Consensus       160 ~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        160 SETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHHHHhCC
Confidence            9999999988 99999999999999987654322211111111112234579999999999988653

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=8.6e-36  Score=274.00  Aligned_cols=228  Identities=27%  Similarity=0.345  Sum_probs=198.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..++++++|||||+||||++++++|++.|++|++++|+.+.+++..++++..+.++.++.||+++++++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            34678999999999999999999999999999999999999999888888877889999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|++|||||... .+++.+.+.+++++++++|+.|++.+++++.|+|++   +++||++||..++.+.++...|++||
T Consensus       391 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK  469 (582)
T PRK05855        391 GVPDIVVNNAGIGM-AGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSK  469 (582)
T ss_pred             CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHH
Confidence            99999999999865 677889999999999999999999999999999863   37999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----H--HHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----D--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++++++++++.|+.+ ||+|++|+||+++|++.......    .  +.........+..+..+||++|+.+++.++..
T Consensus       470 aa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~~~~~~~~~  548 (582)
T PRK05855        470 AAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYGPEKVAKAIVDAVKRN  548 (582)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCCHHHHHHHHHHHHHcC
Confidence            9999999999999998 99999999999999987653211    0  00011111222334568999999999998754

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=5.7e-35  Score=242.05  Aligned_cols=241  Identities=29%  Similarity=0.462  Sum_probs=207.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+++||++++++|+++|++|++++|+.+..+...+++...+.++.++.+|++++++++++++.+.+.++++|
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   80 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD   80 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            47899999999999999999999999999999999888888887776677899999999999999999999999889999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..+..+.+++++++++++|+.+++.+++++.+.++  +.+++|++||..+..+.+.+..|+.+|++++.
T Consensus        81 ~vi~~a~~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~  159 (255)
T TIGR01963        81 ILVNNAGIQH-VAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIG  159 (255)
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHH
Confidence            9999999865 55667788999999999999999999999999885  34689999999888888889999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------H-HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------D-AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ++++++.++.+ +|+++.+.||++.+++.......         . ..........+...+.+++|+|+++++++++...
T Consensus       160 ~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~  239 (255)
T TIGR01963       160 LTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDEVAETALFLASDAAA  239 (255)
T ss_pred             HHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcCHHHHHHHHHHHcCcccc
Confidence            99999999887 99999999999999875432211         0 1111222333556789999999999999987767


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ..+|+++++|||+..
T Consensus       240 ~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       240 GITGQAIVLDGGWTA  254 (255)
T ss_pred             CccceEEEEcCcccc
Confidence            789999999999865

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=1.4e-35  Score=253.39  Aligned_cols=239  Identities=15%  Similarity=0.144  Sum_probs=190.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|+++||||++|||++++++|++.| ++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.++
T Consensus         1 ~~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         1 QQKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            358899999999999999999999999 9999999999888888777765556788899999999999999999988889


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCC-----------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~-----------  153 (255)
                      ++|++|||||+.....+..+.+.++|++++++|+.+++.+++.++|+|++    .++||++||..+..+           
T Consensus        81 ~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~  160 (314)
T TIGR01289        81 PLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKAN  160 (314)
T ss_pred             CCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCccc
Confidence            99999999997542333456789999999999999999999999999963    379999999876421           


Q ss_pred             ----------------------CCCChhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcc-cChhhhhhcCCH-HHH
Q 025259          154 ----------------------PSAMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAQALLGND-AVR  207 (255)
Q Consensus       154 ----------------------~~~~~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v-~t~~~~~~~~~~-~~~  207 (255)
                                            ..++..|++||+++..+++.+++++. + +|+|++|+||+| +|++........ ...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~~  240 (314)
T TIGR01289       161 LGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTLF  240 (314)
T ss_pred             ccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHHH
Confidence                                  13457799999999999999999985 4 899999999999 698865421110 001


Q ss_pred             HHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          208 KALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       208 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      .... ......+.+|++.++.+++++.......+|..+..++
T Consensus       241 ~~~~-~~~~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       241 PPFQ-KYITKGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHH-HHHhccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            1111 1112346789999999999887654446788876544

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-35  Score=247.41  Aligned_cols=233  Identities=24%  Similarity=0.312  Sum_probs=195.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||+|+||++++++|+++|+.|++++|+.+.+++..+.+   +.++.++++|++++++++++++.+.+.++++
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   78 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY---GDRLLPLALDVTDRAAVFAAVETAVEHFGRL   78 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc---cCCeeEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3689999999999999999999999999999999988776654433   4468889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... .+++.+.+.++|++.+++|+.+++.+++++.|.+++  .++||++||..+..+.++...|+++|++++
T Consensus        79 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (275)
T PRK08263         79 DIVVNNAGYGL-FGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALE  157 (275)
T ss_pred             CEEEECCCCcc-ccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHH
Confidence            99999999875 678889999999999999999999999999998853  468999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-------CHHHHHHhhccCCCCCC-CChHHHHHHHHHhcCCCCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-------NDAVRKALEGKTLLNRL-GTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~va~~~~~l~s~~~~~  239 (255)
                      .++++++.|+.+ ||+|+.|.||+++|++......       ............+.+.+ .+|+|+++.+.++++...  
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~~~~l~~~~~--  235 (275)
T PRK08263        158 GMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDPEAAAEALLKLVDAEN--  235 (275)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCHHHHHHHHHHHHcCCC--
Confidence            999999999988 9999999999999998742111       01122333333455667 899999999999997642  


Q ss_pred             ccccEEeeCC
Q 025259          240 ITGETLVVAG  249 (255)
Q Consensus       240 ~~G~~i~~dg  249 (255)
                      .+++.+...+
T Consensus       236 ~~~~~~~~~~  245 (275)
T PRK08263        236 PPLRLFLGSG  245 (275)
T ss_pred             CCeEEEeCch
Confidence            3455555444

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.1e-35  Score=244.39  Aligned_cols=233  Identities=17%  Similarity=0.211  Sum_probs=194.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC-
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI-   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~-   90 (255)
                      |+++||||++|||++++++|+++|++|++++|+. +.+++.   .+..+.+++++++|++++++++++++++.+.++.. 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~   78 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKL---AEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDN   78 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHH---HhccCCceEEEEecCCCHHHHHHHHHHHHHhcCccc
Confidence            6899999999999999999999999999999986 333322   22335678899999999999999999998776532 


Q ss_pred             ---cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           91 ---DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        91 ---d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                         .++|||+|......++.+.+.++|.+.+++|+.+++.+++.++|++++   .++||++||..+..+.++...|+++|
T Consensus        79 ~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  158 (251)
T PRK06924         79 VSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSK  158 (251)
T ss_pred             CCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHH
Confidence               289999998654567889999999999999999999999999999854   35899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcC--CH--HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          165 TALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLG--ND--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       165 aa~~~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      ++++.++++++.|++  + +|+|++|.||+++|++......  ..  ...+......+.+++.+|+|+|+.+++++++. 
T Consensus       159 aa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        159 AGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCCcCCHHHHHHHHHHHHhcc-
Confidence            999999999999975  3 8999999999999998654211  11  11223334456778999999999999999874 


Q ss_pred             CCccccEEeeCC
Q 025259          238 SYITGETLVVAG  249 (255)
Q Consensus       238 ~~~~G~~i~~dg  249 (255)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            789999999886

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=3.3e-35  Score=247.95  Aligned_cols=228  Identities=27%  Similarity=0.389  Sum_probs=191.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++.+.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45678999999999999999999999999999999999888888888887767789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--------CeEEEEcCcCccCCCCCChh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--------SSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--------~~iv~vss~~~~~~~~~~~~  159 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|.+.        ++||++||..+..+.++...
T Consensus        82 g~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~  160 (287)
T PRK06194         82 GAVHLLFNNAGVGA-GGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGI  160 (287)
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcc
Confidence            99999999999875 5678889999999999999999999999999988521        68999999999998889999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCCH-H------------HHHHhhccCCCCCCCChH
Q 025259          160 YGVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGND-A------------VRKALEGKTLLNRLGTTG  223 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~~-~------------~~~~~~~~~~~~~~~~~~  223 (255)
                      |+++|++++.|+++++.|+..   +||++.+.||+++|++.......+ .            ...............+++
T Consensus       161 Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  240 (287)
T PRK06194        161 YNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVGSGKVTAE  240 (287)
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhhccCCCHH
Confidence            999999999999999999863   699999999999998764321100 0            000001111111247999


Q ss_pred             HHHHHHHHhcCCC
Q 025259          224 NMAAAIAFLASDD  236 (255)
Q Consensus       224 ~va~~~~~l~s~~  236 (255)
                      |+|+.+..++...
T Consensus       241 dva~~i~~~~~~~  253 (287)
T PRK06194        241 EVAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHHHHHcC
Confidence            9999999987543

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-35  Score=245.97  Aligned_cols=222  Identities=21%  Similarity=0.271  Sum_probs=187.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||+||||++++++|+++|++|++++|+.+.++.+.+.   .+.++.++.+|+++++++.++++.+.+.++++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~   79 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL---HPDRALARLLDVTDFDAIDAVVADAEATFGPI   79 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh---cCCCeeEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            368999999999999999999999999999999998776554332   24568889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... .++..+.+.++|++++++|+.+++.+.++++|+++  +.++||++||..+..+.+++..|+++|++++
T Consensus        80 d~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~  158 (277)
T PRK06180         80 DVLVNNAGYGH-EGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALE  158 (277)
T ss_pred             CEEEECCCccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHH
Confidence            99999999864 67788999999999999999999999999999885  3468999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-----CHHH------HHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-----NDAV------RKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-----~~~~------~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      .++++++.|+.+ ++++++|.||+++|++......     .+..      ........+..++.+|+|+|+.+.+++...
T Consensus       159 ~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~l~~~  238 (277)
T PRK06180        159 GISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQPGDPAKAAQAILAAVESD  238 (277)
T ss_pred             HHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHcCC
Confidence            999999999988 9999999999999987432211     1111      111112234456789999999999998764

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-35  Score=248.12  Aligned_cols=218  Identities=17%  Similarity=0.272  Sum_probs=187.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..+++++|+++||||+||||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|++++.++++.+.+
T Consensus        34 ~~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  113 (293)
T PRK05866         34 QPVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEK  113 (293)
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999888888877777888999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCC--CHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccC-CCCCChhh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKT--KESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQ-PPSAMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~-~~~~~~~y  160 (255)
                      .++++|++|||||... ..++.+.  +++++++.+++|+.|++.++++++|+|++  .++||++||..+.. +.++...|
T Consensus       114 ~~g~id~li~~AG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y  192 (293)
T PRK05866        114 RIGGVDILINNAGRSI-RRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVY  192 (293)
T ss_pred             HcCCCCEEEECCCCCC-CcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchH
Confidence            9999999999999864 4444432  46889999999999999999999999853  47999999976654 35778899


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +++|+|+++|+++++.|+.+ +|+|++|+||+++|++.......           ......+|+++|+.++..+..
T Consensus       193 ~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~~-----------~~~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        193 NASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKAY-----------DGLPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCccccccccc-----------cCCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999998 99999999999999986432110           011246999999999888764

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=1.3e-34  Score=239.69  Aligned_cols=240  Identities=42%  Similarity=0.625  Sum_probs=200.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHHcC-CeEEEEEecCCC-HHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN--VDKAVEKLKALG-IEVIGIICHVSN-EQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~-~~~~~~~~D~~~-~~~~~~~~~~~~   84 (255)
                      .+++|+++||||++|||+++|+.|++.|+.|+++.++.+.  .+...+.....+ ....+..+|+++ +++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4679999999999999999999999999998888887654  344444333222 368888899998 999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC-ChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~-~~~y~~  162 (255)
                      +.+|++|++|||||... . .++.+.+.++|++++++|+.+++.+++++.|+++++ +||++||..+. +.++ +..|++
T Consensus        82 ~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-~Iv~isS~~~~-~~~~~~~~Y~~  158 (251)
T COG1028          82 EEFGRIDILVNNAGIAG-PDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQ-RIVNISSVAGL-GGPPGQAAYAA  158 (251)
T ss_pred             HHcCCCCEEEECCCCCC-CCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhC-eEEEECCchhc-CCCCCcchHHH
Confidence            99999999999999875 4 588999999999999999999999999888888766 99999999999 7777 499999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH-HHHhhccCCCCCCCChHHHHHHHHHhcCCC-CCC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV-RKALEGKTLLNRLGTTGNMAAAIAFLASDD-ASY  239 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~s~~-~~~  239 (255)
                      ||+|+++|+++++.|+.+ ||++++|+||+++|++.......... ........+..+...|+++++.+.++.+.. ..+
T Consensus       159 sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (251)
T COG1028         159 SKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEALKRLAARIPLGRLGTPEEVAAAVAFLASDEAASY  238 (251)
T ss_pred             HHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCcchhcc
Confidence            999999999999999988 99999999999999988754332200 111111115558889999999999998774 778


Q ss_pred             ccccEEeeCCCc
Q 025259          240 ITGETLVVAGGM  251 (255)
Q Consensus       240 ~~G~~i~~dgG~  251 (255)
                      ++|+.+.+|||+
T Consensus       239 ~~g~~~~~~~~~  250 (251)
T COG1028         239 ITGQTLPVDGGL  250 (251)
T ss_pred             ccCCEEEeCCCC
Confidence            999999999986

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=1.7e-35  Score=253.10  Aligned_cols=234  Identities=20%  Similarity=0.232  Sum_probs=186.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|+++||||++|||++++++|++.|++|++++|+.+.+++..+++.    ++.++.+|++|.++++++++++.+.+
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~----~v~~~~~Dl~d~~~v~~~~~~~~~~~   97 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGID----GVEVVMLDLADLESVRAFAERFLDSG   97 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----hCeEEEccCCCHHHHHHHHHHHHhcC
Confidence            35789999999999999999999999999999999999888777766653    36788999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCcc------------CC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGY------------QP  153 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~------------~~  153 (255)
                      +++|+||||||... .  ..+.+.++|+..+++|+.+++.++++++|.|++.  ++||++||....            .+
T Consensus        98 ~~iD~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~  174 (315)
T PRK06196         98 RRIDILINNAGVMA-C--PETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRG  174 (315)
T ss_pred             CCCCEEEECCCCCC-C--CCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCC
Confidence            99999999999753 2  2355678899999999999999999999998643  699999997543            23


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHH-HHhh-ccCCCC-CCCChHHHHHHH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVR-KALE-GKTLLN-RLGTTGNMAAAI  229 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~~~-~~~~~~-~~~~~~~va~~~  229 (255)
                      .++...|+.||++++.+++.++.++.+ +|+|++|+||+++|++........... .+.. ...++. ++.+|+++|..+
T Consensus       175 ~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  254 (315)
T PRK06196        175 YDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKTPAQGAATQ  254 (315)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCCHhHHHHHH
Confidence            345678999999999999999999988 999999999999999865432211110 1111 111222 578999999999


Q ss_pred             HHhcCCCCCCccccEEeeC
Q 025259          230 AFLASDDASYITGETLVVA  248 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~d  248 (255)
                      +|+++......+|..+..|
T Consensus       255 ~~l~~~~~~~~~~g~~~~~  273 (315)
T PRK06196        255 VWAATSPQLAGMGGLYCED  273 (315)
T ss_pred             HHHhcCCccCCCCCeEeCC
Confidence            9999764443444444444

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=1.6e-34  Score=237.07  Aligned_cols=235  Identities=37%  Similarity=0.614  Sum_probs=205.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||++++||++++++|+++|++|++++|+. +.++...+.+++.+.++.++.+|++++++++++++.+.+.++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999999998875 55566667777777788999999999999999999999999999999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      ||++|... ..++.+.+.+++++.+++|+.+++.+.+.+.+++.  +.++++++||..+..+.+++..|+++|++++.++
T Consensus        81 i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~  159 (239)
T TIGR01830        81 VNNAGITR-DNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFT  159 (239)
T ss_pred             EECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHH
Confidence            99999864 55667888899999999999999999999999874  3569999999999888899999999999999999


Q ss_pred             HHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          172 KALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       172 ~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ++++.++.+ +++++.+.||++++++....  ............+..+..+++|+++.+++++.+...+++|+++++|+|
T Consensus       160 ~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~g  237 (239)
T TIGR01830       160 KSLAKELASRNITVNAVAPGFIDTDMTDKL--SEKVKKKILSQIPLGRFGTPEEVANAVAFLASDEASYITGQVIHVDGG  237 (239)
T ss_pred             HHHHHHHhhcCeEEEEEEECCCCChhhhhc--ChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCcccCCcCCCEEEeCCC
Confidence            999999887 99999999999999876543  233334445566778899999999999999988778899999999999


Q ss_pred             cc
Q 025259          251 MA  252 (255)
Q Consensus       251 ~~  252 (255)
                      +.
T Consensus       238 ~~  239 (239)
T TIGR01830       238 MY  239 (239)
T ss_pred             cC
Confidence            73

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=7.9e-35  Score=239.30  Aligned_cols=221  Identities=26%  Similarity=0.383  Sum_probs=194.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ||+++++++++||||+++||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+
T Consensus         1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (239)
T PRK07666          1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKN   80 (239)
T ss_pred             CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            35667899999999999999999999999999999999999888888888877777899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +++++|++|||+|... .+++.+.++++|++.+++|+.+++.+.+++.+++.  ..+++|++||..+..+.++...|+.+
T Consensus        81 ~~~~id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~s  159 (239)
T PRK07666         81 ELGSIDILINNAGISK-FGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSAS  159 (239)
T ss_pred             HcCCccEEEEcCcccc-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHH
Confidence            9999999999999865 56677889999999999999999999999999885  34689999999999998899999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |++++.++++++.|+.+ +|+++.|.||+++|++.......         ......+.+++|+|+.+..+++..
T Consensus       160 K~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        160 KFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGLT---------DGNPDKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhcccc---------ccCCCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999988 99999999999999975432110         011235789999999999998764

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-35  Score=242.59  Aligned_cols=212  Identities=19%  Similarity=0.246  Sum_probs=183.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++++||||++|||++++++|+++|++|++++|+.+.+++..+++...+ ++.++.||+++++++.++++++.+++|++|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAA-RVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCC-eeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            4789999999999999999999999999999999988877777665444 788999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|.........+.+.+++++++++|+.+++.++++++|.|+  +.++||++||..+..+.+....|++||++++.
T Consensus        81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  160 (257)
T PRK07024         81 VVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIK  160 (257)
T ss_pred             EEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHH
Confidence            9999999764222333478899999999999999999999999885  34799999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++++.|+.+ +|++++|.||+++|++.....            .+.....+|+++++.++..+...
T Consensus       161 ~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~~~~~l~~~  216 (257)
T PRK07024        161 YLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP------------YPMPFLMDADRFAARAARAIARG  216 (257)
T ss_pred             HHHHHHHHhhccCcEEEEEecCCCcCchhhcCC------------CCCCCccCHHHHHHHHHHHHhCC
Confidence            99999999988 999999999999999754211            11123468999999999888654

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.4e-34  Score=239.35  Aligned_cols=229  Identities=20%  Similarity=0.259  Sum_probs=190.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+|+||.+++++|+++|++|++++|+++.+++..+.+   +.++.++.+|++++++++++++++.+.++++|+
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   77 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDV   77 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---ccceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            36999999999999999999999999999999988776655543   446888999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      +|||+|......+..+.+.++|++++++|+.+++.+++++.|+++  +.++||++||..+..+.++...|+++|++++.+
T Consensus        78 vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~  157 (248)
T PRK10538         78 LVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_pred             EEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHH
Confidence            999999754345677889999999999999999999999999985  346899999999888888899999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcccChhh-hhhc-CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVPTHFA-QALL-GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~t~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++.++.++.+ +|++++|.||++.++.. .... ........   ........+|+|+|+.++++++....+.+++...+
T Consensus       158 ~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~  234 (248)
T PRK10538        158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK---TYQNTVALTPEDVSEAVWWVATLPAHVNINTLEMM  234 (248)
T ss_pred             HHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh---hccccCCCCHHHHHHHHHHHhcCCCcccchhhccc
Confidence            9999999998 99999999999984433 2111 11111111   11122457999999999999998777777766443

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-34  Score=241.73  Aligned_cols=218  Identities=25%  Similarity=0.356  Sum_probs=189.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++++++||||+++||++++++|+++|++|++++|+.+.+++..+++ ..+.++.++.+|++|+++++.+++.+.+ ++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~   79 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARL-PYPGRHRWVVADLTSEAGREAVLARARE-MG   79 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH-hcCCceEEEEccCCCHHHHHHHHHHHHh-cC
Confidence            467999999999999999999999999999999999998888887777 4456888999999999999999999876 78


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||... ..++.+.+.+++++.+++|+.|++.+++.+.|++++.  ++||++||..+..+.++...|+++|++
T Consensus        80 ~id~lv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a  158 (263)
T PRK09072         80 GINVLINNAGVNH-FALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFA  158 (263)
T ss_pred             CCCEEEECCCCCC-ccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHH
Confidence            9999999999865 6678889999999999999999999999999998643  789999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++++++++.|+.+ +|+|+.|+||+++|++......      ... .....+..+|+|+|+.+++++...
T Consensus       159 ~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~~------~~~-~~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        159 LRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAVQ------ALN-RALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcccccchhhhcc------ccc-ccccCCCCCHHHHHHHHHHHHhCC
Confidence            99999999999988 9999999999999987643211      000 111235779999999999999764

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=5e-35  Score=250.17  Aligned_cols=210  Identities=22%  Similarity=0.305  Sum_probs=174.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|++++||||++|||++++++|+++|++|++++|+++.+++..+++++.  +.++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            5899999999999999999999999999999999999999998888764  3578889999985  22333444444444


Q ss_pred             C--CcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC-C-CCCChhhH
Q 025259           89 R--IDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ-P-PSAMAMYG  161 (255)
Q Consensus        89 ~--~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~-~-~~~~~~y~  161 (255)
                      .  +|++|||||.... ..++.+.+++++++++++|+.+++.++++++|.|.  +.++||++||..+.. + .|....|+
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~  209 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYA  209 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHH
Confidence            4  6699999998642 24678899999999999999999999999999985  458999999998864 3 57789999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +||+++++|+++++.|+++ ||+|++|+||+++|+|....  .          .. ....+|+++|+.++..+..
T Consensus       210 aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~--~----------~~-~~~~~p~~~A~~~~~~~~~  271 (320)
T PLN02780        210 ATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR--R----------SS-FLVPSSDGYARAALRWVGY  271 (320)
T ss_pred             HHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc--C----------CC-CCCCCHHHHHHHHHHHhCC
Confidence            9999999999999999998 99999999999999986421  0          00 1146899999999988854

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.1e-35  Score=248.52  Aligned_cols=239  Identities=22%  Similarity=0.226  Sum_probs=190.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++.+.  +.++.++.||+++.++++++++++.
T Consensus         9 ~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~   88 (313)
T PRK05854          9 VPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLR   88 (313)
T ss_pred             CcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999999999988888888654  3468899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCC----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQP----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~----------  153 (255)
                      +.++++|+||||||...  .+..+.+.++++.++++|+.+++.+++.++|.|++ .++||++||..+..+          
T Consensus        89 ~~~~~iD~li~nAG~~~--~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~  166 (313)
T PRK05854         89 AEGRPIHLLINNAGVMT--PPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWE  166 (313)
T ss_pred             HhCCCccEEEECCcccc--CCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCccccccc
Confidence            99999999999999864  23446788999999999999999999999999864 479999999876543          


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHh--CC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhcc-CCCC-CCCCh
Q 025259          154 --PSAMAMYGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGK-TLLN-RLGTT  222 (255)
Q Consensus       154 --~~~~~~y~~sKaa~~~l~~~la~e~--~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~-~~~~-~~~~~  222 (255)
                        +++...|+.||+++..|++.++.++  .+ +|+||+++||+++|++......    ...+....... .... .+.++
T Consensus       167 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (313)
T PRK05854        167 RSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFLVGTV  246 (313)
T ss_pred             ccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccccCCH
Confidence              3456789999999999999999865  34 8999999999999998643211    01111111110 0011 24688


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          223 GNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       223 ~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++-+...++++.... ..+|..+..+
T Consensus       247 ~~ga~~~l~~a~~~~-~~~g~~~~~~  271 (313)
T PRK05854        247 ESAILPALYAATSPD-AEGGAFYGPR  271 (313)
T ss_pred             HHHHHHhhheeeCCC-CCCCcEECCC
Confidence            888888888775432 2357777654

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=243.64  Aligned_cols=218  Identities=23%  Similarity=0.261  Sum_probs=182.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-GRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~   90 (255)
                      +|+++||||+||||++++++|+++|++|++++|+.+.++++.    +.  .+.++.+|++|+++++++++++.+.+ +++
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~----~~--~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~i   77 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE----AE--GLEAFQLDYAEPESIAALVAQVLELSGGRL   77 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HC--CceEEEccCCCHHHHHHHHHHHHHHcCCCc
Confidence            689999999999999999999999999999999987765543    22  36778999999999999999998766 689


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... .+++.+.+.+++++++++|+.|++.+++.++|+|++  .++||++||..+..+.++...|++||++++
T Consensus        78 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  156 (277)
T PRK05993         78 DALFNNGAYGQ-PGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIE  156 (277)
T ss_pred             cEEEECCCcCC-CCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHH
Confidence            99999999875 677888999999999999999999999999999863  478999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC------------HHH----HHHhhc-cCCCCCCCChHHHHHHHH
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN------------DAV----RKALEG-KTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~------------~~~----~~~~~~-~~~~~~~~~~~~va~~~~  230 (255)
                      +|+++++.|+.+ ||+|++|.||+++|++.......            .+.    ...... ..+.....+||++|+.++
T Consensus       157 ~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i~  236 (277)
T PRK05993        157 GLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVLL  236 (277)
T ss_pred             HHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHHH
Confidence            999999999998 99999999999999987543210            000    000111 111223568999999999


Q ss_pred             HhcCCC
Q 025259          231 FLASDD  236 (255)
Q Consensus       231 ~l~s~~  236 (255)
                      ..+...
T Consensus       237 ~a~~~~  242 (277)
T PRK05993        237 HALTAP  242 (277)
T ss_pred             HHHcCC
Confidence            888654

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.5e-36  Score=227.03  Aligned_cols=237  Identities=25%  Similarity=0.387  Sum_probs=207.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..+|-+.+||||.||+|++.+++|+++|++|++.+..+++.++..+++   |.++.|.+.|+++++++..+++..+.+||
T Consensus         6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel---g~~~vf~padvtsekdv~aala~ak~kfg   82 (260)
T KOG1199|consen    6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL---GGKVVFTPADVTSEKDVRAALAKAKAKFG   82 (260)
T ss_pred             hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh---CCceEEeccccCcHHHHHHHHHHHHhhcc
Confidence            457889999999999999999999999999999999998887777665   78899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCC-----CcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--------CCCeEEEEcCcCccCCCC
Q 025259           89 RIDVFVLNAAVNPYAA-----DLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--------KGSSVVFISSIAGYQPPS  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~-----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--------~~~~iv~vss~~~~~~~~  155 (255)
                      ++|.+|||||+....+     .-...+.+++++.+++|+.|+|++++....+|-        .+|.||+..|.+++.+.-
T Consensus        83 rld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~  162 (260)
T KOG1199|consen   83 RLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQT  162 (260)
T ss_pred             ceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCcc
Confidence            9999999999754222     345678899999999999999999999988872        346799999999999999


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHHHhc
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~  233 (255)
                      +.++|++||.++-+++--+++++++ |||++.|.||.++||+....+  +.....+...+|. .+++.|.|-+..+-.+.
T Consensus       163 gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslp--ekv~~fla~~ipfpsrlg~p~eyahlvqaii  240 (260)
T KOG1199|consen  163 GQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLP--EKVKSFLAQLIPFPSRLGHPHEYAHLVQAII  240 (260)
T ss_pred             chhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhh--HHHHHHHHHhCCCchhcCChHHHHHHHHHHH
Confidence            9999999999999999999999999 999999999999999986553  2334445555555 47999999999999998


Q ss_pred             CCCCCCccccEEeeCCCcc
Q 025259          234 SDDASYITGETLVVAGGMA  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                        ++.++||++|.+||-.-
T Consensus       241 --enp~lngevir~dgalr  257 (260)
T KOG1199|consen  241 --ENPYLNGEVIRFDGALR  257 (260)
T ss_pred             --hCcccCCeEEEecceec
Confidence              56789999999999653

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.7e-34  Score=235.88  Aligned_cols=235  Identities=25%  Similarity=0.392  Sum_probs=198.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+++||.++++.|+++|++|++++|+.+..++..+++... .++++++||++++++++++++++...++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   80 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY-GNIHYVVGDVSSTESARNVIEKAAKVLN   80 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999999998887766666554 3688899999999999999999988889


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~y~~sKaa~  167 (255)
                      ++|.+|+++|... ..+..  ..+++++++++|+.+++.+.+.+.|.+++++++|++||..+. .+.++...|+++|+++
T Consensus        81 ~id~ii~~ag~~~-~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~  157 (238)
T PRK05786         81 AIDGLVVTVGGYV-EDTVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGL  157 (238)
T ss_pred             CCCEEEEcCCCcC-CCchH--HHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHH
Confidence            9999999999753 23332  348899999999999999999999999888899999998774 4667788899999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.++++++.++.+ +|+++.|.||+++|++...    ... ...  ........+++|+++.+.+++++....++|+.+.
T Consensus       158 ~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~----~~~-~~~--~~~~~~~~~~~~va~~~~~~~~~~~~~~~g~~~~  230 (238)
T PRK05786        158 AKAVEILASELLGRGIRVNGIAPTTISGDFEPE----RNW-KKL--RKLGDDMAPPEDFAKVIIWLLTDEADWVDGVVIP  230 (238)
T ss_pred             HHHHHHHHHHHhhcCeEEEEEecCccCCCCCch----hhh-hhh--ccccCCCCCHHHHHHHHHHHhcccccCccCCEEE
Confidence            9999999999987 9999999999999986421    111 111  0112346799999999999999888899999999


Q ss_pred             eCCCccCC
Q 025259          247 VAGGMASR  254 (255)
Q Consensus       247 ~dgG~~~~  254 (255)
                      +|||..++
T Consensus       231 ~~~~~~~~  238 (238)
T PRK05786        231 VDGGARLK  238 (238)
T ss_pred             ECCccccC
Confidence            99998764

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=243.17  Aligned_cols=237  Identities=22%  Similarity=0.285  Sum_probs=197.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|+.+..++..+++...+  .++.++.+|++|+++++. ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            57899999999999999999999999999999999988888777666543  578899999999999999 999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||+|... .+...+.+.+++++.+++|+.+++.+.++++|+|+  +.++||++||..+..+.++...|+++|++
T Consensus        81 ~id~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~  159 (280)
T PRK06914         81 RIDLLVNNAGYAN-GGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYA  159 (280)
T ss_pred             CeeEEEECCcccc-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHH
Confidence            9999999999765 66778889999999999999999999999999885  34689999999999998999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-----------HHHHHHhhc--cCCCCCCCChHHHHHHHHHh
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-----------DAVRKALEG--KTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-----------~~~~~~~~~--~~~~~~~~~~~~va~~~~~l  232 (255)
                      ++.|+++++.++.+ +|+++.+.||+++|++.......           .........  ..+..++.+|+|+|++++++
T Consensus       160 ~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~  239 (280)
T PRK06914        160 LEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSDTFGNPIDVANLIVEI  239 (280)
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhhccCCHHHHHHHHHHH
Confidence            99999999999988 99999999999999976532110           111111111  12446788999999999999


Q ss_pred             cCCCCCCccccEEeeCCCcc
Q 025259          233 ASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +++...   +..+.+..|..
T Consensus       240 ~~~~~~---~~~~~~~~~~~  256 (280)
T PRK06914        240 AESKRP---KLRYPIGKGVK  256 (280)
T ss_pred             HcCCCC---CcccccCCchH
Confidence            976543   24566665543

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-34  Score=237.86  Aligned_cols=227  Identities=22%  Similarity=0.325  Sum_probs=192.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++..|+++||||+++||++++++|+++|+.|++++|+.+.+++..+++...+.++.++.+|+++++++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            56788999999999999999999999999999999998887777777776677888999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||... ..+..+.+++++++.+++|+.+++.+.+++++.++  ..++||++||..++.+.++...|+++|++
T Consensus        87 ~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  165 (274)
T PRK07775         87 EIEVLVSGAGDTY-FGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAG  165 (274)
T ss_pred             CCCEEEECCCcCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHH
Confidence            9999999999865 56677889999999999999999999999999875  34689999999998888888899999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH--HHHHHhh--ccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND--AVRKALE--GKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++.++++++.++.+ +|++++|.||+++|++........  .......  .......+..++|+|++++++++..
T Consensus       166 ~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        166 LEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHHHHHHHHHHhcCC
Confidence            99999999999987 999999999999998654321110  1111111  1222356889999999999999754

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-34  Score=238.45  Aligned_cols=211  Identities=22%  Similarity=0.241  Sum_probs=179.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhH-HHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKN-VDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+++||||++|||++++++|+++| ++|++++|+.+. +++..++++..+ .+++++.+|++|+++++++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            57899999999999999999999985 899999999886 888888887765 3789999999999999999999886 5


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|++|||+|... .......+.++..+++++|+.+++.+++.+.|+|++  .++||++||..+..+.++...|++||+
T Consensus        86 g~id~li~~ag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKa  164 (253)
T PRK07904         86 GDVDVAIVAFGLLG-DAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKA  164 (253)
T ss_pred             CCCCEEEEeeecCC-chhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHH
Confidence            89999999999854 222222345566788999999999999999999863  479999999988888888889999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++.+|+++++.|+.+ +|+|++|.||+++|++......             .....+|+|+|+.++..+.+.
T Consensus       165 a~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~~-------------~~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        165 GLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAKE-------------APLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCCC-------------CCCCCCHHHHHHHHHHHHHcC
Confidence            999999999999998 9999999999999998653211             122579999999999988654

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3e-34  Score=235.29  Aligned_cols=217  Identities=19%  Similarity=0.204  Sum_probs=178.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++||||++|||++++++|++.|  +.|++..|+...  +      ..+.++.+++||++++++++++.    ++++++
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~--~------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~i   68 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP--D------FQHDNVQWHALDVTDEAEIKQLS----EQFTQL   68 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc--c------cccCceEEEEecCCCHHHHHHHH----HhcCCC
Confidence            479999999999999999999985  556666665432  1      11357888999999999988754    456799


Q ss_pred             cEEEECCCCCCC-----CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCcc---CCCCCChhh
Q 025259           91 DVFVLNAAVNPY-----AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGY---QPPSAMAMY  160 (255)
Q Consensus        91 d~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~---~~~~~~~~y  160 (255)
                      |++|||+|....     ..++.+.+.++|++.+.+|+.+++.+++.+.|.|++  .++|+++||..+.   .+.+++..|
T Consensus        69 d~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         69 DWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             CEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchh
Confidence            999999998642     235678888999999999999999999999999864  3689999886553   234667899


Q ss_pred             HHhHHHHHHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +++|+++++|+++++.|+.+   +|+|++|.||+++|++....          ....+.++..+|+|+|+.+++++++..
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~----------~~~~~~~~~~~~~~~a~~~~~l~~~~~  218 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF----------QQNVPKGKLFTPEYVAQCLLGIIANAT  218 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch----------hhccccCCCCCHHHHHHHHHHHHHcCC
Confidence            99999999999999999874   89999999999999986432          123356678899999999999999988


Q ss_pred             CCccccEEeeCCCc
Q 025259          238 SYITGETLVVAGGM  251 (255)
Q Consensus       238 ~~~~G~~i~~dgG~  251 (255)
                      .+.+|+.+.+|||.
T Consensus       219 ~~~~g~~~~~~g~~  232 (235)
T PRK09009        219 PAQSGSFLAYDGET  232 (235)
T ss_pred             hhhCCcEEeeCCcC
Confidence            89999999999985

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=244.26  Aligned_cols=238  Identities=25%  Similarity=0.219  Sum_probs=187.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++|+++||||++|||++++++|+++|++|++++|+.+..++..+++...  +.++.++.+|+++.++++++++++.
T Consensus        11 ~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~   90 (306)
T PRK06197         11 IPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALR   90 (306)
T ss_pred             cccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999988887777777643  4578899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccC----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQ----------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~----------  152 (255)
                      ++++++|++|||||... .  ..+.+.++++..+++|+.+++.+++.++|.+++  .++||++||..+..          
T Consensus        91 ~~~~~iD~li~nAg~~~-~--~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~  167 (306)
T PRK06197         91 AAYPRIDLLINNAGVMY-T--PKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQ  167 (306)
T ss_pred             hhCCCCCEEEECCcccc-C--CCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccC
Confidence            99999999999999754 2  235677889999999999999999999999863  46999999986532          


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEE--eCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHH
Q 025259          153 ---PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCV--APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMA  226 (255)
Q Consensus       153 ---~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v--~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  226 (255)
                         +.++...|++||++++.|++.++.++++ +++++++  +||+++|++.+....  ..........+. ...+|++-+
T Consensus       168 ~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~--~~~~~~~~~~~~-~~~~~~~g~  244 (306)
T PRK06197        168 WERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPR--ALRPVATVLAPL-LAQSPEMGA  244 (306)
T ss_pred             cccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcH--HHHHHHHHHHhh-hcCCHHHHH
Confidence               2345678999999999999999999977 7766655  799999998764321  111111111111 134666666


Q ss_pred             HHHHHhcCCCCCCccccEEeeCCCc
Q 025259          227 AAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ...++++.. ....+|+.+..||+.
T Consensus       245 ~~~~~~~~~-~~~~~g~~~~~~~~~  268 (306)
T PRK06197        245 LPTLRAATD-PAVRGGQYYGPDGFG  268 (306)
T ss_pred             HHHHHHhcC-CCcCCCeEEccCccc
Confidence            666666643 445689999888764

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-34  Score=228.95  Aligned_cols=196  Identities=20%  Similarity=0.214  Sum_probs=172.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||++|||++++++|+++ ++|++++|+.+                 .++||+++++++++++++    ++++|++
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------------~~~~D~~~~~~~~~~~~~----~~~id~l   59 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------------DVQVDITDPASIRALFEK----VGKVDAV   59 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------------ceEecCCChHHHHHHHHh----cCCCCEE
Confidence            6999999999999999999999 99999999753                 368999999999888775    4789999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~  173 (255)
                      |||+|... ..++.+.++++|++.+++|+.+++.+.+++.|+|++.++|+++||..+..+.+++..|+++|+++++|+++
T Consensus        60 v~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~  138 (199)
T PRK07578         60 VSAAGKVH-FAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPIPGGASAATVNGALEGFVKA  138 (199)
T ss_pred             EECCCCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCCCCchHHHHHHHHHHHHHHH
Confidence            99999764 67788899999999999999999999999999998889999999999999999999999999999999999


Q ss_pred             HHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          174 LAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       174 la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++.|+ + +|+|++|+||+++|++....           ...+.....+|+|+|+.+.++++.   ..+|+++.+
T Consensus       139 la~e~-~~gi~v~~i~Pg~v~t~~~~~~-----------~~~~~~~~~~~~~~a~~~~~~~~~---~~~g~~~~~  198 (199)
T PRK07578        139 AALEL-PRGIRINVVSPTVLTESLEKYG-----------PFFPGFEPVPAARVALAYVRSVEG---AQTGEVYKV  198 (199)
T ss_pred             HHHHc-cCCeEEEEEcCCcccCchhhhh-----------hcCCCCCCCCHHHHHHHHHHHhcc---ceeeEEecc
Confidence            99999 7 99999999999999874211           112334578999999999999863   589998875

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-33  Score=235.50  Aligned_cols=223  Identities=26%  Similarity=0.411  Sum_probs=191.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++++|||||+|+||++++++|+++|++|++++|+++..++..+++...+.++.++.+|++++++++.+++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999998888888888877777899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCC-CHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKT-KESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..++.+. +.+++++.+++|+.+++.+++.+.+++. ..++||++||..+..+.++...|+++|++++.
T Consensus        81 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~  159 (263)
T PRK06181         81 ILVNNAGITM-WSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHG  159 (263)
T ss_pred             EEEECCCccc-ccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHH
Confidence            9999999865 5667777 8999999999999999999999999885 45799999999999898899999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++++.++.+ +++++++.||++.|++........... ..........+.+|+|+|+.+.++++..
T Consensus       160 ~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        160 FFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP-LGKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc-cccccccccCCCCHHHHHHHHHHHhhCC
Confidence            99999999988 999999999999999866433211100 0001111236899999999999999753

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-34  Score=235.67  Aligned_cols=216  Identities=24%  Similarity=0.231  Sum_probs=185.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-cCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK-YGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g~~d   91 (255)
                      |++|||||+++||++++++|+++|++|++++|+.+.++++...+.  +.++.++.+|+++.+++.++++.+.+. ++++|
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id   79 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG--AGNAWTGALDVTDRAAWDAALADFAAATGGRLD   79 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCC
Confidence            789999999999999999999999999999999988877766554  457889999999999999999998876 78999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||||... ..++.+.+.+++++++++|+.+++.+++++.++|+  +.++||++||..+..+.++...|+.||+++++
T Consensus        80 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~  158 (260)
T PRK08267         80 VLFNNAGILR-GGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRG  158 (260)
T ss_pred             EEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHH
Confidence            9999999875 67788899999999999999999999999999885  35799999999999998999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ++++++.++.+ +|++++|.||+++|++..... .........   ......+|+++++.++.++..
T Consensus       159 ~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~-~~~~~~~~~---~~~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        159 LTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS-NEVDAGSTK---RLGVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHhcccCcEEEEEecCCcCCccccccc-chhhhhhHh---hccCCCCHHHHHHHHHHHHhC
Confidence            99999999988 999999999999999865411 111111111   123357899999999999854

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=1.2e-33  Score=242.28  Aligned_cols=238  Identities=15%  Similarity=0.115  Sum_probs=187.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|+++||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|+++.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            55679999999999999999999999999999999999988888888775545678899999999999999999988777


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC----CeEEEEcCcCccC-----------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG----SSVVFISSIAGYQ-----------  152 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~----~~iv~vss~~~~~-----------  152 (255)
                      +++|+||||||+.....+..+.+.+++++++++|+.|++.++++++|+|++.    ++||++||.....           
T Consensus        82 ~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~  161 (322)
T PRK07453         82 KPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPA  161 (322)
T ss_pred             CCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCC
Confidence            8899999999975422334567899999999999999999999999998532    4999999965421           


Q ss_pred             ------------------------CCCCChhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcc-cChhhhhhcCC-H
Q 025259          153 ------------------------PPSAMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFV-PTHFAQALLGN-D  204 (255)
Q Consensus       153 ------------------------~~~~~~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v-~t~~~~~~~~~-~  204 (255)
                                              ++.+...|+.||.+.+.+++.+++++. . +|++++++||+| .|++.+..... .
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~  241 (322)
T PRK07453        162 PADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPLFQ  241 (322)
T ss_pred             ccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHHHH
Confidence                                    123456899999999999999999984 3 899999999999 58876543211 1


Q ss_pred             HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          205 AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      .+...+.. .......++++-++.+++++.+.....+|..+.
T Consensus       242 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        242 KLFPWFQK-NITGGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHH-HHhhceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            11111111 112234677888888888776654456888886

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=2.4e-34  Score=220.94  Aligned_cols=183  Identities=24%  Similarity=0.377  Sum_probs=166.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |++.|.++|||||++|||++++++|.+.|-.|++++|+++.+++.+++.    ..++...||+.|.++++++++.+.+.+
T Consensus         1 mk~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~----p~~~t~v~Dv~d~~~~~~lvewLkk~~   76 (245)
T COG3967           1 MKTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN----PEIHTEVCDVADRDSRRELVEWLKKEY   76 (245)
T ss_pred             CcccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC----cchheeeecccchhhHHHHHHHHHhhC
Confidence            3567999999999999999999999999999999999999998877654    567888999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCc--CCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAADL--LKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~--~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +.++++|||||+.. .-.+  .+.+.++.++.+.+|+.++..+++.++|++.  +.+.||+|||..+..|....+.|+++
T Consensus        77 P~lNvliNNAGIqr-~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaT  155 (245)
T COG3967          77 PNLNVLINNAGIQR-NEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCAT  155 (245)
T ss_pred             Cchheeeecccccc-hhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhh
Confidence            99999999999875 2222  3556777889999999999999999999985  45789999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccCh
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~  195 (255)
                      |||+..|+.+|+.+++. +|+|.-+.|-.|+|+
T Consensus       156 KAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         156 KAAIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            99999999999999998 999999999999996

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-34  Score=238.09  Aligned_cols=217  Identities=26%  Similarity=0.372  Sum_probs=184.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++++||||+|+||++++++|+++|++|++++|+.+..+.        ..++.+++||++|+++++++++.+.+.++++
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~   74 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP--------IPGVELLELDVTDDASVQAAVDEVIARAGRI   74 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc--------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCC
Confidence            46899999999999999999999999999999998755432        2357789999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... .+++.+.+.+++++++++|+.+++.++++++|+|++  .++||++||..+..+.+....|+++|++++
T Consensus        75 d~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  153 (270)
T PRK06179         75 DVLVNNAGVGL-AGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVE  153 (270)
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHH
Confidence            99999999875 677888999999999999999999999999999853  479999999999999888999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH----HH---HHHhh--ccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND----AV---RKALE--GKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~----~~---~~~~~--~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      .++++++.|+++ +|+++.|.||+++|++........    ..   .....  -..+..+..+|+++|+.++++++..
T Consensus       154 ~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        154 GYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCCCHHHHHHHHHHHHcCC
Confidence            999999999988 999999999999999875432111    00   00000  0123456789999999999998764

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.1e-33  Score=229.23  Aligned_cols=211  Identities=19%  Similarity=0.290  Sum_probs=185.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|+++||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++++|+++++++.++++++.+.+++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            789999999999999999999999999999999998888887777654  568899999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCC-ChhhHHhHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSA-MAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~-~~~y~~sKaa  166 (255)
                      +|++|||||+.. ..++.+.+.+.+++.+++|+.+++.+.+.+.|+++  +.++||++||..+..+.+. ...|+.||++
T Consensus        82 id~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a  160 (248)
T PRK08251         82 LDRVIVNAGIGK-GARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAG  160 (248)
T ss_pred             CCEEEECCCcCC-CCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHH
Confidence            999999999865 56677888999999999999999999999999885  3468999999988877764 6889999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++.++++++.++.. +|++++|+||+++|++......             .....++++.++.++..+...
T Consensus       161 ~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~-------------~~~~~~~~~~a~~i~~~~~~~  218 (248)
T PRK08251        161 VASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS-------------TPFMVDTETGVKALVKAIEKE  218 (248)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc-------------CCccCCHHHHHHHHHHHHhcC
Confidence            99999999999987 9999999999999998653211             123578999999998887654

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-33  Score=233.33  Aligned_cols=216  Identities=22%  Similarity=0.325  Sum_probs=180.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++|++|++++|+.+.++...    +.  .+.++.+|++++++++++++.+.+.++++|+
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~   75 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA----AA--GFTAVQLDVNDGAALARLAEELEAEHGGLDV   75 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HC--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            68999999999999999999999999999999987665432    22  3567899999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      +|||||... .+++.+.+.+++++.+++|+.+++.++++++|.+++ .++||++||..+..+.+....|+++|++++.++
T Consensus        76 vi~~ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~  154 (274)
T PRK05693         76 LINNAGYGA-MGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALS  154 (274)
T ss_pred             EEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHH
Confidence            999999864 667888899999999999999999999999998864 479999999999988888999999999999999


Q ss_pred             HHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------H--HHHHHhhc--cCCCCCCCChHHHHHHHHHhcCC
Q 025259          172 KALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------D--AVRKALEG--KTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       172 ~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~--~~~~~~~~--~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ++++.|+.+ ||+|++|.||+++|++.......         +  ...+....  ........+|+++|+.++..+..
T Consensus       155 ~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        155 DALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            999999988 99999999999999986542111         0  01111110  01113356899999999887764

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-32  Score=225.41  Aligned_cols=225  Identities=25%  Similarity=0.380  Sum_probs=193.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +.+.+++++||||+|+||++++++|++.|++|++++|+++.+++..+++... .+++++.+|+++++++..+++++.+.+
T Consensus         2 ~~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (237)
T PRK07326          2 MSLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK-GNVLGLAADVRDEADVQRAVDAIVAAF   80 (237)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc-CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3466899999999999999999999999999999999998888877777654 578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +++|++||++|... .+++.+.+.+++++.+++|+.+++.+++++++.++ ..++||++||..+..+.++...|+.+|++
T Consensus        81 ~~~d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a  159 (237)
T PRK07326         81 GGLDVLIANAGVGH-FAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFG  159 (237)
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHH
Confidence            99999999999765 56778899999999999999999999999999884 45789999999988888888999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      ++++++.++.++.+ ++++++|.||++.|++........           .....+++|+++.++++++.....+.+++-
T Consensus       160 ~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~-----------~~~~~~~~d~a~~~~~~l~~~~~~~~~~~~  228 (237)
T PRK07326        160 LVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPSEK-----------DAWKIQPEDIAQLVLDLLKMPPRTLPSKIE  228 (237)
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeccccCcccccccchh-----------hhccCCHHHHHHHHHHHHhCCccccccceE
Confidence            99999999999987 999999999999998754321110           112368999999999999887665555443

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-33  Score=227.80  Aligned_cols=220  Identities=22%  Similarity=0.267  Sum_probs=181.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH-HHHHc---CC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK-TVEKY---GR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-~~~~~---g~   89 (255)
                      ++|||||+||||++++++|+++|++|++++|+.+..  .   ....+.++.++++|+++++++++++++ +.+.+   ++
T Consensus         3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~--~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS--L---AAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh--h---hhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            699999999999999999999999999999986531  1   223356788999999999999998877 55554   37


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|++|||+|......++.+.+.++|++.+++|+.+++.+.+.+.+.+.+  .++||++||..+..+.+++..|+++|+++
T Consensus        78 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (243)
T PRK07023         78 RVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAAL  157 (243)
T ss_pred             ceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHH
Confidence            9999999998654467778899999999999999999999999998853  47999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----HHHHHHhhccCCCCCCCChHHHHH-HHHHhcCCCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAA-AIAFLASDDASY  239 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~va~-~~~~l~s~~~~~  239 (255)
                      +++++.++.+ .+ +|+++.|+||+++|++.......    ...........+.++..+|+|+|+ .+.+|++++...
T Consensus       158 ~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~l~~~~~~~  234 (243)
T PRK07023        158 DHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTPEDAARRLIAYLLSDDFGS  234 (243)
T ss_pred             HHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCHHHHHHHHHHHHhccccCC
Confidence            9999999999 66 99999999999999986543211    111223344556788999999999 566787765433

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4e-32  Score=227.98  Aligned_cols=232  Identities=25%  Similarity=0.365  Sum_probs=190.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .|++|||||+|+||++++++|+++|++|+++.|+++.+++..+..   +.++.++++|++++++++++++++.+.++++|
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   78 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY---GDRLWVLQLDVTDSAAVRAVVDRAFAALGRID   78 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc---cCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            478999999999999999999999999999999987766654432   34688899999999999999999999899999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||||... ..+..+.+.+++++.+++|+.+++.++++++|+|+  ..++||++||..+..+.++...|++||++++.
T Consensus        79 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (276)
T PRK06482         79 VVVSNAGYGL-FGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEG  157 (276)
T ss_pred             EEEECCCCCC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHH
Confidence            9999999875 66777888999999999999999999999999885  34689999999988888899999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-----------HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      ++++++.++.+ +|+++.+.||++.|++.......           ........ ..+..-..+|+|++++++..+... 
T Consensus       158 ~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~a~~~~~~~~-  235 (276)
T PRK06482        158 FVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALA-DGSFAIPGDPQKMVQAMIASADQT-  235 (276)
T ss_pred             HHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHh-hccCCCCCCHHHHHHHHHHHHcCC-
Confidence            99999999988 99999999999988875432210           01222222 122233578999999999988543 


Q ss_pred             CCccccEEeeCCCc
Q 025259          238 SYITGETLVVAGGM  251 (255)
Q Consensus       238 ~~~~G~~i~~dgG~  251 (255)
                        ..+..+++.+|.
T Consensus       236 --~~~~~~~~g~~~  247 (276)
T PRK06482        236 --PAPRRLTLGSDA  247 (276)
T ss_pred             --CCCeEEecChHH
Confidence              224567776654

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-32  Score=224.82  Aligned_cols=208  Identities=19%  Similarity=0.241  Sum_probs=182.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |+++||||++|||++++++|+++|++|++++|+++..++..+++... +.++.+++||++++++++++++++..   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            68999999999999999999999999999999998888777776554 45889999999999999999998764   479


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||+|... ..+..+.+.+++.+.+++|+.+++.+.+++.|+|.  +.+++|++||..+..+.++...|+++|+++++
T Consensus        79 ~vv~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  157 (243)
T PRK07102         79 IVLIAVGTLG-DQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTA  157 (243)
T ss_pred             EEEECCcCCC-CcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHH
Confidence            9999999765 55677889999999999999999999999999985  35789999999998888889999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++++.|+.+ +|++++|.||+++|++.....            .+...+.+|+++++.++.+++..
T Consensus       158 ~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~~------------~~~~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        158 FLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGLK------------LPGPLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHhhccCcEEEEEecCcccChhhhccC------------CCccccCCHHHHHHHHHHHHhCC
Confidence            99999999988 999999999999999754321            12334789999999999998764

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=6.6e-33  Score=216.26  Aligned_cols=221  Identities=22%  Similarity=0.306  Sum_probs=182.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLE-GASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   87 (255)
                      .|.++||||.+|||..++++|.+. |..++ .+.|+.+...+..+.......+++.++.|++..++++.+++++.+..  
T Consensus         3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~   82 (249)
T KOG1611|consen    3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS   82 (249)
T ss_pred             CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence            456999999999999999999874 77655 45566766533333333346899999999999999999999999874  


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-------------CCeEEEEcCcCccCC-
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-------------GSSVVFISSIAGYQP-  153 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-------------~~~iv~vss~~~~~~-  153 (255)
                      .++|+||||||+........+.+.+.|.+.+++|..|++.+.|+++|++++             +..||++||..+-.+ 
T Consensus        83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            479999999999877778888899999999999999999999999999963             236999998877532 


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          154 --PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       154 --~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                        ..++.+|..||+|+++|+|+++.|+++ +|-|..++||||.|+|...                 ....++||-+..++
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~-----------------~a~ltveeSts~l~  225 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK-----------------KAALTVEESTSKLL  225 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC-----------------CcccchhhhHHHHH
Confidence              346789999999999999999999999 9999999999999999762                 23567888777777


Q ss_pred             HhcCCCCCCccccEEeeCC
Q 025259          231 FLASDDASYITGETLVVAG  249 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dg  249 (255)
                      ..+..-...-||..++-||
T Consensus       226 ~~i~kL~~~hnG~ffn~dl  244 (249)
T KOG1611|consen  226 ASINKLKNEHNGGFFNRDG  244 (249)
T ss_pred             HHHHhcCcccCcceEccCC
Confidence            7776666667788887765

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=1e-33  Score=233.18  Aligned_cols=204  Identities=27%  Similarity=0.325  Sum_probs=169.0

Q ss_pred             HHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcC
Q 025259           28 VAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL  107 (255)
Q Consensus        28 ~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~  107 (255)
                      ++++|+++|++|++++|+++..+.           ..+++||+++.++++++++++.   +++|+||||||... .    
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~~-----------~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~-~----   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMTL-----------DGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPG-T----   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhhh-----------hHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCC-C----
Confidence            478999999999999998765421           2357899999999999988774   68999999999752 1    


Q ss_pred             CCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC---------------------------CCCCChhh
Q 025259          108 KTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ---------------------------PPSAMAMY  160 (255)
Q Consensus       108 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~---------------------------~~~~~~~y  160 (255)
                          +.+++++++|+.+++.+++.++|+|++.++||++||..+..                           +.++...|
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y  137 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGY  137 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHH
Confidence                24789999999999999999999997779999999998862                           55677899


Q ss_pred             HHhHHHHHHHHHHHH-HHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          161 GVTKTALLGLTKALA-AEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       161 ~~sKaa~~~l~~~la-~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ++||+++++++++++ .|+++ |||||+|+||+++|+|.....+............|.+++.+|+|+|+.+.||+++...
T Consensus       138 ~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~~~~  217 (241)
T PRK12428        138 QLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSDAAR  217 (241)
T ss_pred             HHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcChhhc
Confidence            999999999999999 99988 9999999999999998754322111011111235678899999999999999998889


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|+.+.+|||...+
T Consensus       218 ~~~G~~i~vdgg~~~~  233 (241)
T PRK12428        218 WINGVNLPVDGGLAAT  233 (241)
T ss_pred             CccCcEEEecCchHHH
Confidence            9999999999998643

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-32  Score=255.05  Aligned_cols=215  Identities=19%  Similarity=0.248  Sum_probs=187.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.||++++++++++++++.+.+|
T Consensus       368 ~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g  447 (657)
T PRK07201        368 PLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG  447 (657)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999988888877777899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCC--CHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           89 RIDVFVLNAAVNPYAADLLKT--KESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++|++|||||... ..++.+.  ..+++++++++|+.+++.+++.++|+|++  .++||++||..+..+.++.+.|+++|
T Consensus       448 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  526 (657)
T PRK07201        448 HVDYLVNNAGRSI-RRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASK  526 (657)
T ss_pred             CCCEEEECCCCCC-CCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHH
Confidence            9999999999753 3333222  35789999999999999999999999863  47999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +++++|+++++.|+.+ +|+|++|+||+++|++......           .......+|+++|+.++..+..
T Consensus       527 ~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~-----------~~~~~~~~~~~~a~~i~~~~~~  587 (657)
T PRK07201        527 AALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR-----------YNNVPTISPEEAADMVVRAIVE  587 (657)
T ss_pred             HHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc-----------ccCCCCCCHHHHHHHHHHHHHh
Confidence            9999999999999988 9999999999999998643210           0122367899999999987644

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=100.00  E-value=1.4e-32  Score=213.84  Aligned_cols=163  Identities=33%  Similarity=0.568  Sum_probs=155.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK--QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      |+++||||++|||++++++|+++|. .|++++|+  .+..++..++++..+.++.+++||++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            6899999999999999999999966 58899999  78888888999888899999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +|++|||+|... .+++.+.+.++|++++++|+.+++.+.+++.|  ++.++||++||..+..+.++...|+++|+|+++
T Consensus        81 ld~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~  157 (167)
T PF00106_consen   81 LDILINNAGIFS-DGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGVRGSPGMSAYSASKAALRG  157 (167)
T ss_dssp             ESEEEEECSCTT-SBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHH
T ss_pred             cccccccccccc-ccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhccCCCCChhHHHHHHHHHH
Confidence            999999999987 88999999999999999999999999999999  778999999999999999999999999999999


Q ss_pred             HHHHHHHHh
Q 025259          170 LTKALAAEM  178 (255)
Q Consensus       170 l~~~la~e~  178 (255)
                      |+++++.|+
T Consensus       158 ~~~~la~e~  166 (167)
T PF00106_consen  158 LTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHhc
Confidence            999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-32  Score=223.26  Aligned_cols=204  Identities=21%  Similarity=0.289  Sum_probs=173.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||++|||++++++|+++|++|++++|+++.+++..+    ...++.+++||++++++++++++++..   .+|.
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~   74 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHT----QSANIFTLAFDVTDHPGTKAALSQLPF---IPEL   74 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----hcCCCeEEEeeCCCHHHHHHHHHhccc---CCCE
Confidence            789999999999999999999999999999999877655433    234678899999999999999887642   4799


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      +|||||... ..+..+.++++|++++++|+.+++++++++.|+|+++++||++||..+..+.++...|+++|++++++++
T Consensus        75 ~i~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~  153 (240)
T PRK06101         75 WIFNAGDCE-YMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFAR  153 (240)
T ss_pred             EEEcCcccc-cCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHH
Confidence            999999653 3344567889999999999999999999999999877889999999999998999999999999999999


Q ss_pred             HHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          173 ALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       173 ~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++.|+.+ +|+++++.||+++|++......            ......+|+++|+.++..+...
T Consensus       154 ~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~~------------~~~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        154 TLQLDLRPKGIEVVTVFPGFVATPLTDKNTF------------AMPMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHhcCceEEEEeCCcCCCCCcCCCCC------------CCCcccCHHHHHHHHHHHHhcC
Confidence            99999988 9999999999999997543210            1122468999999998777553

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=3e-32  Score=222.91  Aligned_cols=189  Identities=20%  Similarity=0.280  Sum_probs=175.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+.+|.|+|||+.+|+|+.+|++|.++|+.|++...+++..+.+..+.+  .++...++.|++++++++++.+.+.+..
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~--s~rl~t~~LDVT~~esi~~a~~~V~~~l  102 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETK--SPRLRTLQLDVTKPESVKEAAQWVKKHL  102 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhc--CCcceeEeeccCCHHHHHHHHHHHHHhc
Confidence            45789999999999999999999999999999988888888887777665  5678888999999999999999999976


Q ss_pred             C--CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 G--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +  ++-.||||||+....++.+..+.+++.+++++|++|++.++++++|+++ .+||||++||+.+-.+.|...+|++||
T Consensus       103 ~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK  182 (322)
T KOG1610|consen  103 GEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSK  182 (322)
T ss_pred             ccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhH
Confidence            4  5899999999888889999999999999999999999999999999996 569999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhh
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQ  198 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~  198 (255)
                      +|++.|+.+++.|+.+ ||.|..|.||...|++..
T Consensus       183 ~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  183 FAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             HHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999 999999999999998764

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=8.9e-32  Score=226.92  Aligned_cols=231  Identities=26%  Similarity=0.325  Sum_probs=190.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ..++.+++++|||+++|||+++|+.|+.+|++|++..|+.+..++..++|+..  ..++.+++||+++.+++.++.+++.
T Consensus        30 ~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~  109 (314)
T KOG1208|consen   30 GIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFK  109 (314)
T ss_pred             cccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999999999999863  4678899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCccC----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGYQ----------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~~----------  152 (255)
                      +.++++|++|||||+...+   ...+.|.++.+|.+|+.|+|.+++.++|.|+..  +|||++||.....          
T Consensus       110 ~~~~~ldvLInNAGV~~~~---~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~  186 (314)
T KOG1208|consen  110 KKEGPLDVLINNAGVMAPP---FSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGE  186 (314)
T ss_pred             hcCCCccEEEeCcccccCC---cccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccch
Confidence            9999999999999997522   267888999999999999999999999999744  7999999977410          


Q ss_pred             -C--CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccCh-hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHH
Q 025259          153 -P--PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAA  228 (255)
Q Consensus       153 -~--~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~  228 (255)
                       .  +....+|+.||-+...+++.|++++..||.+++++||.+.|+ +.+    ...+...+........+.++++-|+.
T Consensus       187 ~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r----~~~~~~~l~~~l~~~~~ks~~~ga~t  262 (314)
T KOG1208|consen  187 KAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR----VNLLLRLLAKKLSWPLTKSPEQGAAT  262 (314)
T ss_pred             hccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec----chHHHHHHHHHHHHHhccCHHHHhhh
Confidence             0  233445999999999999999999988999999999999998 544    12222223333333334688889998


Q ss_pred             HHHhcCC-CCCCccccE
Q 025259          229 IAFLASD-DASYITGET  244 (255)
Q Consensus       229 ~~~l~s~-~~~~~~G~~  244 (255)
                      +++++.. +-...+|..
T Consensus       263 ~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  263 TCYAALSPELEGVSGKY  279 (314)
T ss_pred             eehhccCccccCccccc
Confidence            8887754 344555655

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.9e-32  Score=209.79  Aligned_cols=183  Identities=20%  Similarity=0.296  Sum_probs=166.4

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-HcC
Q 025259           11 QGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE-KYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~-~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g   88 (255)
                      +.|.+||||++ ||||.++++.|+++|+.|+.+.|..+....+..+   .  .+.+.+.|+++++++.....++.+ .+|
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~---~--gl~~~kLDV~~~~~V~~v~~evr~~~~G   80 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ---F--GLKPYKLDVSKPEEVVTVSGEVRANPDG   80 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh---h--CCeeEEeccCChHHHHHHHHHHhhCCCC
Confidence            47899999965 7999999999999999999999998776554432   2  488899999999999999999999 789


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-cCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      ++|+|+||||..- ..|..|.+.++.++.|++|++|.+.++|++...+ +..|.||+++|..+..|.|..+.|++||||+
T Consensus        81 kld~L~NNAG~~C-~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAi  159 (289)
T KOG1209|consen   81 KLDLLYNNAGQSC-TFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAI  159 (289)
T ss_pred             ceEEEEcCCCCCc-ccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHH
Confidence            9999999999864 6688999999999999999999999999999765 5779999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhh
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQA  199 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~  199 (255)
                      ..+++.|..|++| ||+|..+.||.|.|++...
T Consensus       160 hay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k  192 (289)
T KOG1209|consen  160 HAYARTLRLELKPFGVRVINAITGGVATDIADK  192 (289)
T ss_pred             HHhhhhcEEeeeccccEEEEecccceecccccC
Confidence            9999999999999 9999999999999987654

>PRK08264 short chain dehydrogenase; Validated

Probab=99.98  E-value=2.5e-30  Score=212.38  Aligned_cols=203  Identities=27%  Similarity=0.354  Sum_probs=174.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++++++++||||+|+||++++++|+++|+ .|++++|+.+.+++       .+.++.++.+|+++++++.++++.    
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-------~~~~~~~~~~D~~~~~~~~~~~~~----   70 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-------LGPRVVPLQLDVTDPASVAAAAEA----   70 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-------cCCceEEEEecCCCHHHHHHHHHh----
Confidence            557899999999999999999999999999 89999999866543       355788999999999998887765    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++||++|......++.+.+.+++.+.+++|+.+++.+.+++.|.++  +.+++|++||..+..+.++...|+++|
T Consensus        71 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK  150 (238)
T PRK08264         71 ASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASK  150 (238)
T ss_pred             cCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHH
Confidence            467999999999844466788899999999999999999999999999885  357899999999999889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++.+++.++.++.+ +++++.+.||.++|++.....               ....+++++++.++..+...
T Consensus       151 ~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~---------------~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        151 AAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD---------------APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC---------------cCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999988 999999999999998754321               12567788888887766543

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.98  E-value=4.2e-30  Score=213.28  Aligned_cols=216  Identities=22%  Similarity=0.263  Sum_probs=178.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||+|+||++++++|++.|++|++++|+.+..++..+.....+.++.++.+|+++++++.++++      +++|
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~id   75 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDVD   75 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCCC
Confidence            5789999999999999999999999999999999888777777766667778999999999999877654      3799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++|||||... .++..+.+.+++++.+++|+.+++.+.+.+++.++  +.++||++||..+..+.++...|+++|++++.
T Consensus        76 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~  154 (257)
T PRK09291         76 VLLNNAGIGE-AGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEA  154 (257)
T ss_pred             EEEECCCcCC-CcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHH
Confidence            9999999875 67888999999999999999999999999999875  34789999999888888888999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-------H-HHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-------D-AVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +++.++.++.+ +|++++|.||++.|++.......       . ..........+ ....+++++++.+..++..
T Consensus       155 ~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        155 IAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP-LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc-ccCCCHHHHHHHHHHHhcC
Confidence            99999999987 99999999999999875432110       0 00110111112 2346899999888877654

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.5e-30  Score=210.82  Aligned_cols=200  Identities=20%  Similarity=0.276  Sum_probs=165.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+++||||+++||++++++|+++|++|++++|+++..++..    +. .++.++.+|++|+++++++++.+.+  +++|+
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~----~~-~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~   74 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ----AL-PGVHIEKLDMNDPASLDQLLQRLQG--QRFDL   74 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH----hc-cccceEEcCCCCHHHHHHHHHHhhc--CCCCE
Confidence            68999999999999999999999999999999987654432    22 2567788999999999999998854  47999


Q ss_pred             EEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCcCccCC---CCCChhhHHhHHHH
Q 025259           93 FVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSIAGYQP---PSAMAMYGVTKTAL  167 (255)
Q Consensus        93 lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~~~~~~---~~~~~~y~~sKaa~  167 (255)
                      +|||+|.... ..++.+.+.+++++.+++|+.+++.+.+++.+.+++. +.++++||..+..+   ..++..|+++|+++
T Consensus        75 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~  154 (225)
T PRK08177         75 LFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAAL  154 (225)
T ss_pred             EEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHH
Confidence            9999998642 3456788999999999999999999999999998754 78999998776543   34667899999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +.|+++++.|+++ +|++++|+||+++|++....                 ...++++.+..++.++...
T Consensus       155 ~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~-----------------~~~~~~~~~~~~~~~~~~~  207 (225)
T PRK08177        155 NSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN-----------------APLDVETSVKGLVEQIEAA  207 (225)
T ss_pred             HHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC-----------------CCCCHHHHHHHHHHHHHhC
Confidence            9999999999988 99999999999999985321                 1135666666666666444

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.97  E-value=2.6e-31  Score=217.38  Aligned_cols=186  Identities=29%  Similarity=0.398  Sum_probs=166.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcC--
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYG--   88 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   88 (255)
                      |+|++||||+.|||++.+++||++|.+|++++|++++++.+.++|.+. +.++..+.+|++++++   ..+++.+.+.  
T Consensus        49 g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~---~ye~i~~~l~~~  125 (312)
T KOG1014|consen   49 GSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDE---VYEKLLEKLAGL  125 (312)
T ss_pred             CCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCch---hHHHHHHHhcCC
Confidence            599999999999999999999999999999999999999999999775 6789999999998887   2344444333  


Q ss_pred             CCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           89 RIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      .+-+||||+|... .+..+.+.+.+++++.+++|..+...+++.++|.|.  ++|-||+++|..+..|.|.++.|+++|+
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~  205 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKA  205 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHH
Confidence            4668999999874 466788888889999999999999999999999994  5688999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL  200 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~  200 (255)
                      .++.|+++|..|+.. ||.|.++.|..|.|.|....
T Consensus       206 ~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  206 FVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            999999999999998 99999999999999987543

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=8.7e-30  Score=211.29  Aligned_cols=220  Identities=19%  Similarity=0.235  Sum_probs=179.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-GRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d   91 (255)
                      |+++||||+|+||+++++.|+++|++|++++|+.+.++...    +.  .+..+.||+++.+++.++++.+.+.. +++|
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~   76 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN----SL--GFTGILLDLDDPESVERAADEVIALTDNRLY   76 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH----hC--CCeEEEeecCCHHHHHHHHHHHHHhcCCCCe
Confidence            68999999999999999999999999999999987765432    22  35678999999999999999987754 6899


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      .+|||+|... ..+..+.+.+++++.+++|+.|++.+.+.+.+.++  +.++||++||..+..+.++...|+++|++++.
T Consensus        77 ~ii~~ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~  155 (256)
T PRK08017         77 GLFNNAGFGV-YGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEA  155 (256)
T ss_pred             EEEECCCCCC-ccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHH
Confidence            9999999765 56778889999999999999999999999999885  34689999999998888899999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++++++.++.+ +++++.|.||+++|++......................+..|+|+++.+..+++.....
T Consensus       156 ~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        156 WSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            99999999888 99999999999999876543211100000000000123589999999999999765443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=2.2e-31  Score=207.83  Aligned_cols=237  Identities=24%  Similarity=0.245  Sum_probs=193.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..++.+|+||++.|||..++..+.+++-.+...++++...+ ........++.......|++....+.++++..++++++
T Consensus         4 ~~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~-~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gk   82 (253)
T KOG1204|consen    4 NMRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE-LEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGK   82 (253)
T ss_pred             ccceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc-ccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCc
Confidence            35778999999999999999999888766554454443333 22222234556677778899899999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcC--CCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC---CeEEEEcCcCccCCCCCChhhHHhH
Q 025259           90 IDVFVLNAAVNPYAADLL--KTKESVLDKLWEINVKSSILLMQDAAPHMQKG---SSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~---~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      .|++|||||.....+...  ..+.++|++.|+.|+++.+.+.+.++|.+++.   +.+|++||.++..|++.|++||.+|
T Consensus        83 r~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   83 RDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            999999999876444454  77889999999999999999999999998755   7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       165 aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      ||.++|++.++.|-..++++.++.||.+||+|......    .+.....++.....+++.+|...|+.+..|+.... +.
T Consensus       163 aAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~~~~~ll~~~~~a~~l~~L~e~~~-f~  241 (253)
T KOG1204|consen  163 AARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELKESGQLLDPQVTAKVLAKLLEKGD-FV  241 (253)
T ss_pred             HHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHHhcCCcCChhhHHHHHHHHHHhcC-cc
Confidence            99999999999984348999999999999999865432    24445555666667889999999999999986654 89


Q ss_pred             cccEEeeC
Q 025259          241 TGETLVVA  248 (255)
Q Consensus       241 ~G~~i~~d  248 (255)
                      +|+.+.-.
T Consensus       242 sG~~vdy~  249 (253)
T KOG1204|consen  242 SGQHVDYY  249 (253)
T ss_pred             cccccccc
Confidence            99987643

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9.7e-30  Score=207.80  Aligned_cols=217  Identities=24%  Similarity=0.233  Sum_probs=190.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.++||||++|||+++++.+..+|++|.++.|+.+++.+++++++-.  ..++.+..+|++|-+++...++++++..+.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            68999999999999999999999999999999999999999999754  3448899999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC---CeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG---SSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~---~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      |.+|||||... ++.+.+.++++++..+++|+.++++++++.++.|++.   |+|+.+||..+..+..++++|+++|+|+
T Consensus       114 d~l~~cAG~~v-~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~al  192 (331)
T KOG1210|consen  114 DNLFCCAGVAV-PGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFAL  192 (331)
T ss_pred             ceEEEecCccc-ccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHH
Confidence            99999999886 8999999999999999999999999999999999744   4999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhh-hhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQ-ALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      .+|+..+++|+.+ +|+|....|+.++||... +....++.......   ......+|++|.+++--+
T Consensus       193 rgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t~ii~g---~ss~~~~e~~a~~~~~~~  257 (331)
T KOG1210|consen  193 RGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEETKIIEG---GSSVIKCEEMAKAIVKGM  257 (331)
T ss_pred             HHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchheeeecC---CCCCcCHHHHHHHHHhHH
Confidence            9999999999998 999999999999998543 22233332222222   234578899998887544

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=5.8e-29  Score=202.35  Aligned_cols=212  Identities=18%  Similarity=0.215  Sum_probs=174.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+++||||+++||++++++|++.|++|++++|+.+..+++.    ..+  +.++.+|++++++++++++++..  +++|+
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~----~~~--~~~~~~D~~~~~~v~~~~~~~~~--~~~d~   73 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ----ALG--AEALALDVADPASVAGLAWKLDG--EALDA   73 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH----hcc--ceEEEecCCCHHHHHHHHHHhcC--CCCCE
Confidence            58999999999999999999999999999999987665432    222  45789999999999998877632  47999


Q ss_pred             EEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCC---hhhHHhHHHH
Q 025259           93 FVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAM---AMYGVTKTAL  167 (255)
Q Consensus        93 lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~---~~y~~sKaa~  167 (255)
                      +|||+|... ...+..+.+.++|++.+++|+.+++.+.+++.|+|.+ .+++++++|..+..+..+.   ..|+++|+++
T Consensus        74 vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~  153 (222)
T PRK06953         74 AVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAAL  153 (222)
T ss_pred             EEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHH
Confidence            999999763 1345667799999999999999999999999998853 5789999998776553322   3599999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.+++.++.++. ++++++|.||+++|++...                 .....+++.+..++.+++......+|..+..
T Consensus       154 ~~~~~~~~~~~~-~i~v~~v~Pg~i~t~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (222)
T PRK06953        154 NDALRAASLQAR-HATCIALHPGWVRTDMGGA-----------------QAALDPAQSVAGMRRVIAQATRRDNGRFFQY  215 (222)
T ss_pred             HHHHHHHhhhcc-CcEEEEECCCeeecCCCCC-----------------CCCCCHHHHHHHHHHHHHhcCcccCceEEee
Confidence            999999998864 6999999999999998542                 1234778889989888777777899999988


Q ss_pred             CCC
Q 025259          248 AGG  250 (255)
Q Consensus       248 dgG  250 (255)
                      |++
T Consensus       216 ~~~  218 (222)
T PRK06953        216 DGV  218 (222)
T ss_pred             CCc
Confidence            876

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-29  Score=204.81  Aligned_cols=195  Identities=19%  Similarity=0.166  Sum_probs=149.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      -.++++|+++||||++|||++++++|+++|++|++++|+.....+  . . ..+. ...+.+|+++.+++++       .
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~--~-~-~~~~-~~~~~~D~~~~~~~~~-------~   76 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSE--S-N-DESP-NEWIKWECGKEESLDK-------Q   76 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhh--h-h-ccCC-CeEEEeeCCCHHHHHH-------h
Confidence            346789999999999999999999999999999999998632111  1 1 1122 2567899999987654       3


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCe-EEEEcCcCccCCCCCChhhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSS-VVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~-iv~vss~~~~~~~~~~~~y~  161 (255)
                      ++++|++|||||...    ..+.+.++|++++++|+.+++.++|+++|+|++    +++ +++.+|..+..+ +..+.|+
T Consensus        77 ~~~iDilVnnAG~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~  151 (245)
T PRK12367         77 LASLDVLILNHGINP----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYE  151 (245)
T ss_pred             cCCCCEEEECCccCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhH
Confidence            568999999999743    235688999999999999999999999999853    243 445555555444 4567899


Q ss_pred             HhHHHHHHHH---HHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          162 VTKTALLGLT---KALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       162 ~sKaa~~~l~---~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +||+|+..+.   +.++.|+.+ +++|+.+.||+++|++..                  ....+|+++|+.+++.++..
T Consensus       152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~------------------~~~~~~~~vA~~i~~~~~~~  212 (245)
T PRK12367        152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP------------------IGIMSADFVAKQILDQANLG  212 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc------------------cCCCCHHHHHHHHHHHHhcC
Confidence            9999986554   444445566 999999999999998621                  12578999999999998654

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.6e-28  Score=196.35  Aligned_cols=218  Identities=23%  Similarity=0.327  Sum_probs=177.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .|++|||||+|+||+++++.|+++ ++|++++|+.+..++..+..    ..+.++.+|+++++++.++++.+    +++|
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~----~~id   73 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL----PGATPFPVDLTDPEAIAAAVEQL----GRLD   73 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh----ccceEEecCCCCHHHHHHHHHhc----CCCC
Confidence            478999999999999999999999 99999999987665544332    24678899999999988877653    5799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      ++||++|... ..+..+.+.++|.+.+++|+.+++.+.+.+++.+++ .+++|++||..+..+.++...|+.+|++++.+
T Consensus        74 ~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~  152 (227)
T PRK08219         74 VLVHNAGVAD-LGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRAL  152 (227)
T ss_pred             EEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHH
Confidence            9999999864 566778889999999999999999999999998753 57899999999988888899999999999999


Q ss_pred             HHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          171 TKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       171 ~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++.++.++...+++++|.||++++++.......      .....+..++.+++|+++.++++++...   +|.++.++
T Consensus       153 ~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~------~~~~~~~~~~~~~~dva~~~~~~l~~~~---~~~~~~~~  221 (227)
T PRK08219        153 ADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQ------EGGEYDPERYLRPETVAKAVRFAVDAPP---DAHITEVV  221 (227)
T ss_pred             HHHHHHHhcCCceEEEEecCCccchHhhhhhhh------hccccCCCCCCCHHHHHHHHHHHHcCCC---CCccceEE
Confidence            999998865459999999999998865432111      0112234567899999999999997643   34544443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.95  E-value=1.7e-26  Score=234.84  Aligned_cols=183  Identities=16%  Similarity=0.174  Sum_probs=161.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCCh-------------------------------------------
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQ-------------------------------------------   46 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~-------------------------------------------   46 (255)
                      +++++|||||++|||.+++++|+++ |++|++++|+.                                           
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999988 69999999982                                           


Q ss_pred             ----hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHh
Q 025259           47 ----KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV  122 (255)
Q Consensus        47 ----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~  122 (255)
                          ...+...+.+++.|.++.++.||++|.++++++++++.+. +++|+||||||+.. .+.+.+.+.++|+++|++|+
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~-~~~i~~~t~e~f~~v~~~nv 2153 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLA-DKHIQDKTLEEFNAVYGTKV 2153 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHH
Confidence                1122334445556788999999999999999999999877 68999999999875 67889999999999999999


Q ss_pred             HHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhh
Q 025259          123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQ  198 (255)
Q Consensus       123 ~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~  198 (255)
                      .|++.+.+++.+.+.  ++||++||..+..+.+++..|+++|++++.+++.++.++. ++||++|.||+++|+|..
T Consensus      2154 ~G~~~Ll~al~~~~~--~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~-~irV~sI~wG~wdtgm~~ 2226 (2582)
T TIGR02813      2154 DGLLSLLAALNAENI--KLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP-SAKVMSFNWGPWDGGMVN 2226 (2582)
T ss_pred             HHHHHHHHHHHHhCC--CeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC-CcEEEEEECCeecCCccc
Confidence            999999999988653  3799999999999999999999999999999999999874 489999999999998853

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.95  E-value=3.5e-26  Score=199.56  Aligned_cols=194  Identities=21%  Similarity=0.248  Sum_probs=149.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++|+++||||+||||++++++|+++|++|++++|+.+.+++.   +.....++..+.+|++|++++.+.+       +
T Consensus       175 sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~---~~~~~~~v~~v~~Dvsd~~~v~~~l-------~  244 (406)
T PRK07424        175 SLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLE---INGEDLPVKTLHWQVGQEAALAELL-------E  244 (406)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HhhcCCCeEEEEeeCCCHHHHHHHh-------C
Confidence            46899999999999999999999999999999999987665432   2222335678899999998876543       5


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC------CeEEEEcCcCccCCCCCChhhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG------SSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~------~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|||||...    ..+.+.+++++++++|+.|++.++++++|.|+++      +.+|++|+ + ..+.+..+.|++
T Consensus       245 ~IDiLInnAGi~~----~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a-~~~~~~~~~Y~A  318 (406)
T PRK07424        245 KVDILIINHGINV----HGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-A-EVNPAFSPLYEL  318 (406)
T ss_pred             CCCEEEECCCcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-c-cccCCCchHHHH
Confidence            7999999999753    2367889999999999999999999999998532      23455543 3 333345678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ||+|+..+++ +.++.. ++.+..+.||+++|++..                  ....+||++|+.+++.++....
T Consensus       319 SKaAl~~l~~-l~~~~~-~~~I~~i~~gp~~t~~~~------------------~~~~spe~vA~~il~~i~~~~~  374 (406)
T PRK07424        319 SKRALGDLVT-LRRLDA-PCVVRKLILGPFKSNLNP------------------IGVMSADWVAKQILKLAKRDFR  374 (406)
T ss_pred             HHHHHHHHHH-HHHhCC-CCceEEEEeCCCcCCCCc------------------CCCCCHHHHHHHHHHHHHCCCC
Confidence            9999999985 444433 466777889999887621                  1246999999999999977554

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.94  E-value=9.5e-25  Score=170.34  Aligned_cols=175  Identities=21%  Similarity=0.224  Sum_probs=151.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHH---HHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKA---VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      |+++||||+++||++++++|+++|+ .|++++|+.+..+..   .+++++.+.++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            5799999999999999999999997 588888876544332   345555677888999999999999999999998899


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|.+|||+|... ..+..+.+.+++++.+++|+.+++.+.+++.+.  +.++++++||..+..+.++...|+++|++++
T Consensus        81 ~id~li~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~  157 (180)
T smart00822       81 PLRGVIHAAGVLD-DGLLANLTPERFAAVLAPKVDGAWNLHELTRDL--PLDFFVLFSSVAGVLGNPGQANYAAANAFLD  157 (180)
T ss_pred             CeeEEEEccccCC-ccccccCCHHHHHHhhchHhHHHHHHHHHhccC--CcceEEEEccHHHhcCCCCchhhHHHHHHHH
Confidence            9999999999764 556788899999999999999999999999653  3468999999999889899999999999999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCccc
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVP  193 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~  193 (255)
                      .+++.++.+   ++++..+.||++.
T Consensus       158 ~~~~~~~~~---~~~~~~~~~g~~~  179 (180)
T smart00822      158 ALAAHRRAR---GLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHhc---CCceEEEeecccc
Confidence            999887665   8889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=2.5e-23  Score=178.58  Aligned_cols=215  Identities=19%  Similarity=0.118  Sum_probs=157.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++|++|||||+|+||++++++|+++|  +.|++++|+........+.+.  ..++.++.+|++|++++.++++      
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~--~~~~~~v~~Dl~d~~~l~~~~~------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFP--APCLRFFIGDVRDKERLTRALR------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhC--CCcEEEEEccCCCHHHHHHHHh------
Confidence            468999999999999999999999986  679999988665444333332  2468889999999999887765      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                       .+|++||+||...  .+..+.+   ..+.+++|+.+++++++++.+.  ..++||++||.....|   ...|+++|++.
T Consensus        74 -~iD~Vih~Ag~~~--~~~~~~~---~~~~~~~Nv~g~~~ll~aa~~~--~~~~iV~~SS~~~~~p---~~~Y~~sK~~~  142 (324)
T TIGR03589        74 -GVDYVVHAAALKQ--VPAAEYN---PFECIRTNINGAQNVIDAAIDN--GVKRVVALSTDKAANP---INLYGATKLAS  142 (324)
T ss_pred             -cCCEEEECcccCC--CchhhcC---HHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeCCCCCCC---CCHHHHHHHHH
Confidence             5899999999743  1222223   3468999999999999999975  3358999999765433   46799999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc---CCC------CCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK---TLL------NRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---~~~------~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +.+++.++.+... +++++++.||++.++-.. .  .+.+.......   .+.      +.+..++|++++++..+... 
T Consensus       143 E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-~--i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-  218 (324)
T TIGR03589       143 DKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-V--VPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-  218 (324)
T ss_pred             HHHHHHHHhhccccCcEEEEEeecceeCCCCC-c--HHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC-
Confidence            9999999887776 999999999999875211 1  11222222111   111      23678999999999888542 


Q ss_pred             CCccccEEeeCCC
Q 025259          238 SYITGETLVVAGG  250 (255)
Q Consensus       238 ~~~~G~~i~~dgG  250 (255)
                        ..|+++ +..|
T Consensus       219 --~~~~~~-~~~~  228 (324)
T TIGR03589       219 --LGGEIF-VPKI  228 (324)
T ss_pred             --CCCCEE-ccCC
Confidence              246666 4433

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.92  E-value=2.6e-23  Score=186.05  Aligned_cols=220  Identities=15%  Similarity=0.135  Sum_probs=163.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-----C----CeEEEEEecCCCHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-----G----IEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~----~~~~~~~~D~~~~~~~~~~~   80 (255)
                      .+||++|||||+|+||++++++|++.|++|++++|+.+.++.+.+++.+.     +    .++.++.+|+++.+++.++ 
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~a-  156 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPA-  156 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHH-
Confidence            46899999999999999999999999999999999998888777665431     1    3588999999998887653 


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAM  159 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~  159 (255)
                            ++++|+||||+|...  .     ...++...+.+|+.++.++++++...  ..++||++||..+. .+.+. ..
T Consensus       157 ------LggiDiVVn~AG~~~--~-----~v~d~~~~~~VN~~Gt~nLl~Aa~~a--gVgRIV~VSSiga~~~g~p~-~~  220 (576)
T PLN03209        157 ------LGNASVVICCIGASE--K-----EVFDVTGPYRIDYLATKNLVDAATVA--KVNHFILVTSLGTNKVGFPA-AI  220 (576)
T ss_pred             ------hcCCCEEEEcccccc--c-----cccchhhHHHHHHHHHHHHHHHHHHh--CCCEEEEEccchhcccCccc-cc
Confidence                  357999999999643  1     11246788999999999999998865  34699999998764 23222 22


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |. +|+++..+.+.+..++.. ||+++.|.||++.+++.... ..... .......+.++.+..+|||++++|++++.. 
T Consensus       221 ~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~-~t~~v-~~~~~d~~~gr~isreDVA~vVvfLasd~~-  296 (576)
T PLN03209        221 LN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-ETHNL-TLSEEDTLFGGQVSNLQVAELMACMAKNRR-  296 (576)
T ss_pred             hh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCccccc-cccce-eeccccccCCCccCHHHHHHHHHHHHcCch-
Confidence            44 788888888888888877 99999999999988754311 01111 111122456778999999999999998542 


Q ss_pred             CccccEEeeCCC
Q 025259          239 YITGETLVVAGG  250 (255)
Q Consensus       239 ~~~G~~i~~dgG  250 (255)
                      ...++++.+-.+
T Consensus       297 as~~kvvevi~~  308 (576)
T PLN03209        297 LSYCKVVEVIAE  308 (576)
T ss_pred             hccceEEEEEeC
Confidence            123556655444

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.92  E-value=4.5e-23  Score=177.02  Aligned_cols=222  Identities=18%  Similarity=0.179  Sum_probs=162.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|++|+++.|+.+..+.........  ..++.++.+|++++++++++++       
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-------
Confidence            4799999999999999999999999999999988876554443222211  2468889999999999887775       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC-------------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS-------------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~-------------  155 (255)
                      ++|++|||||...     ...+.+.+.+.+++|+.+++.+++++.+.+. .++||++||..++.+..             
T Consensus        77 ~~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~  150 (325)
T PLN02989         77 GCETVFHTASPVA-----ITVKTDPQVELINPAVNGTINVLRTCTKVSS-VKRVILTSSMAAVLAPETKLGPNDVVDETF  150 (325)
T ss_pred             CCCEEEEeCCCCC-----CCCCCChHHHHHHHHHHHHHHHHHHHHHcCC-ceEEEEecchhheecCCccCCCCCccCcCC
Confidence            5899999999642     1223455788999999999999999998652 46899999986643210             


Q ss_pred             ---------CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCC----CCCC
Q 025259          156 ---------AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLL----NRLG  220 (255)
Q Consensus       156 ---------~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~----~~~~  220 (255)
                               ....|+.||.+.+.+++.++.++  ++++..+.|+.+.++.......  ............+.    ..+.
T Consensus       151 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i  228 (325)
T PLN02989        151 FTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN--EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFV  228 (325)
T ss_pred             CCchhHhcccccchHHHHHHHHHHHHHHHHHc--CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCee
Confidence                     12469999999999999988776  7899999999998876432111  11222222222232    3467


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ..+|+|++++.++....  . +..++++|+
T Consensus       229 ~v~Dva~a~~~~l~~~~--~-~~~~ni~~~  255 (325)
T PLN02989        229 DVRDVALAHVKALETPS--A-NGRYIIDGP  255 (325)
T ss_pred             EHHHHHHHHHHHhcCcc--c-CceEEEecC
Confidence            78999999998876532  1 346788544

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.92  E-value=8.2e-23  Score=174.39  Aligned_cols=192  Identities=18%  Similarity=0.133  Sum_probs=151.4

Q ss_pred             CCCEEEEeCCCCchHHH--HHHHHHHcCCeEEEEeCChhHH------------HHHHHHHHHcCCeEEEEEecCCCHHHH
Q 025259           11 QGKVAVVTASTQGIGLG--VAERLGLEGASVVISSRKQKNV------------DKAVEKLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~--~a~~l~~~G~~Vv~~~r~~~~~------------~~~~~~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      .+|++||||+++|+|.+  ++++| +.|++|+++++..+..            +...+.+++.+..+..+.||+++++++
T Consensus        40 ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v  118 (398)
T PRK13656         40 GPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIK  118 (398)
T ss_pred             CCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHH
Confidence            47999999999999999  89999 9999998888643222            234455556677788899999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCC----------------c-----------------CCCCHHHHHHHHHHHhH
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAVNPYAAD----------------L-----------------LKTKESVLDKLWEINVK  123 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~----------------~-----------------~~~~~~~~~~~~~~n~~  123 (255)
                      +++++.+.+.+|++|+||||+|......|                +                 ...+.++++.++++.--
T Consensus       119 ~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMgg  198 (398)
T PRK13656        119 QKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGG  198 (398)
T ss_pred             HHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhcc
Confidence            99999999999999999999997632111                1                 14566677666655544


Q ss_pred             -HHHHHH--HHHHhcccCCCeEEEEcCcCccCCCCCC--hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhh
Q 025259          124 -SSILLM--QDAAPHMQKGSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       124 -~~~~~~--~~~~~~l~~~~~iv~vss~~~~~~~~~~--~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~  197 (255)
                       .-...+  ....+.|.+++++|..|...+....|.+  ..-+.+|++|+.-++.|+.++++ |||+|++.+|++.|...
T Consensus       199 edw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~As  278 (398)
T PRK13656        199 EDWELWIDALDEAGVLAEGAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQAS  278 (398)
T ss_pred             chHHHHHHHHHhcccccCCcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhh
Confidence             223334  4445678888999999998887766655  47899999999999999999999 99999999999999877


Q ss_pred             hhhcCC
Q 025259          198 QALLGN  203 (255)
Q Consensus       198 ~~~~~~  203 (255)
                      ..++.-
T Consensus       279 s~Ip~~  284 (398)
T PRK13656        279 SAIPVM  284 (398)
T ss_pred             hcCCCc
Confidence            666443

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=3.2e-23  Score=163.39  Aligned_cols=174  Identities=17%  Similarity=0.242  Sum_probs=142.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++|||||.+|||..++++|++.|+ +|++++|+.   +..++..+++++.+.++.++.||++|++++.++++++.+.+++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            789999999999999999999986 599999992   3456788888888999999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ++.+||+||... ..++.+.++++++.++...+.+.+.+.+.+.+.  +-..+|.+||..+..+.++.+.|+++.+.++.
T Consensus        82 i~gVih~ag~~~-~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~--~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda  158 (181)
T PF08659_consen   82 IDGVIHAAGVLA-DAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR--PLDFFILFSSISSLLGGPGQSAYAAANAFLDA  158 (181)
T ss_dssp             EEEEEE--------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT--TTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHH
T ss_pred             cceeeeeeeeec-ccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC--CCCeEEEECChhHhccCcchHhHHHHHHHHHH
Confidence            999999999876 778999999999999999999999999999873  34589999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCcEEEEEeCCccc
Q 025259          170 LTKALAAEMAPDTRVNCVAPGFVP  193 (255)
Q Consensus       170 l~~~la~e~~~~i~v~~v~pg~v~  193 (255)
                      |++.....   +.++.+|..|+.+
T Consensus       159 ~a~~~~~~---g~~~~sI~wg~W~  179 (181)
T PF08659_consen  159 LARQRRSR---GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHT---TSEEEEEEE-EBS
T ss_pred             HHHHHHhC---CCCEEEEEccccC
Confidence            99987765   6778888887654

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=2e-22  Score=174.75  Aligned_cols=229  Identities=16%  Similarity=0.060  Sum_probs=165.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++||++|||||+|+||++++++|+++|++|++++|+.+........+. .+.++.++.+|+++.+++.++++..     +
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~-----~   75 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLN-LAKKIEDHFGDIRDAAKLRKAIAEF-----K   75 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHh-hcCCceEEEccCCCHHHHHHHHhhc-----C
Confidence            468999999999999999999999999999999998765444333332 2335778899999999999888864     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------CCCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------PPSAM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------~~~~~  157 (255)
                      +|++||+|+...     ...+.+++...+++|+.+++.+++++.+. ...+++|++||...+.            +..+.
T Consensus        76 ~d~vih~A~~~~-----~~~~~~~~~~~~~~N~~g~~~ll~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~  149 (349)
T TIGR02622        76 PEIVFHLAAQPL-----VRKSYADPLETFETNVMGTVNLLEAIRAI-GSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGH  149 (349)
T ss_pred             CCEEEECCcccc-----cccchhCHHHHHHHhHHHHHHHHHHHHhc-CCCCEEEEEechhhhCCCCCCCCCccCCCCCCC
Confidence            899999999532     23345667788999999999999998753 2245899999964331            22456


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-----CcEEEEEeCCcccChhhhhh-cCCHHHHHHhhccC--------CCCCCCChH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHFAQAL-LGNDAVRKALEGKT--------LLNRLGTTG  223 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-----~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~--------~~~~~~~~~  223 (255)
                      ..|+.+|.+.+.+++.++.++.+     +++++.+.|+.+.++..... .-.+.+........        ....+...+
T Consensus       150 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~  229 (349)
T TIGR02622       150 DPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVL  229 (349)
T ss_pred             CcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHH
Confidence            78999999999999999988754     79999999999988642110 00122222222211        123456778


Q ss_pred             HHHHHHHHhcCCC--CCCccccEEeeCCC
Q 025259          224 NMAAAIAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       224 ~va~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                      |++++++.++...  .....|+++++.+|
T Consensus       230 D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       230 EPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             HHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            9999988776432  11123679999765

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.90  E-value=3e-22  Score=172.96  Aligned_cols=230  Identities=17%  Similarity=0.093  Sum_probs=158.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .++++|++|||||+|+||++++++|++.|++|++++|..+.     ++....+....+.++.++.+|++|.+++..+++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            36789999999999999999999999999999999887543     2221111111234688999999999999988886


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCC---eEEEEcCcCccC-------
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGS---SVVFISSIAGYQ-------  152 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~---~iv~vss~~~~~-------  152 (255)
                      .     .+|+|||+|+... ..    ...+..+..+++|+.++..+++++.+...+.+   ++|++||...+.       
T Consensus        82 ~-----~~d~Vih~A~~~~-~~----~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~  151 (340)
T PLN02653         82 I-----KPDEVYNLAAQSH-VA----VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQS  151 (340)
T ss_pred             c-----CCCEEEECCcccc-hh----hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCC
Confidence            4     5999999999753 11    22334567789999999999999998875434   788888764332       


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHhCC----CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc----------CC
Q 025259          153 ---PPSAMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK----------TL  215 (255)
Q Consensus       153 ---~~~~~~~y~~sKaa~~~l~~~la~e~~~----~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----------~~  215 (255)
                         +..+...|+.||.+.+.+++.++.+++-    .+.++...|+...+.+....   ..+.......          ..
T Consensus       152 E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~g~~  228 (340)
T PLN02653        152 ETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI---TRAVGRIKVGLQKKLFLGNLDA  228 (340)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHH---HHHHHHHHcCCCCceEeCCCcc
Confidence               1224667999999999999999988742    33455556654332111000   0111111111          11


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          216 LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       216 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ...+...+|+|++++.++....    +..+++.+|...+
T Consensus       229 ~rd~i~v~D~a~a~~~~~~~~~----~~~yni~~g~~~s  263 (340)
T PLN02653        229 SRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEESHT  263 (340)
T ss_pred             eecceeHHHHHHHHHHHHhcCC----CCcEEecCCCcee
Confidence            2356789999999999886431    4678888876543

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.89  E-value=3.7e-22  Score=158.36  Aligned_cols=191  Identities=25%  Similarity=0.342  Sum_probs=164.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CeEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG-----ASVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .|.+||||++||||.++|.+|++..     ..++++.|+-++.++.++.+.+..    .++.++..|++++.++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            5899999999999999999999763     347888999999999999998763    4789999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCC--------------------------cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAAD--------------------------LLKTKESVLDKLWEINVKSSILLMQDAAPHM  136 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~--------------------------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l  136 (255)
                      +..+|.++|.+..|||+...++-                          ....+.|++...|++|++|+|.+++.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999997653331                          1156778899999999999999999999988


Q ss_pred             c--CCCeEEEEcCcCccC---------CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC
Q 025259          137 Q--KGSSVVFISSIAGYQ---------PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG  202 (255)
Q Consensus       137 ~--~~~~iv~vss~~~~~---------~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~  202 (255)
                      .  +...+|++||..+..         ...+..+|+.||.+.+-+--.+-+.+.+ |+--.++.||..-|.+......
T Consensus       163 ~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            4  445899999988753         3467788999999999999999999999 9999999999888877655443

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.89  E-value=6.2e-21  Score=163.59  Aligned_cols=222  Identities=17%  Similarity=0.133  Sum_probs=158.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..||++|||||+|+||++++++|+++|++|+++.|+.+..+.........  ..++.++.+|++++++++++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            46899999999999999999999999999999999876554433322211  2468889999999998888776      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-CC------------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-PP------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-~~------------  154 (255)
                       .+|++||+|+... .. .    .+...+.+++|+.++..+++++.... ...+||++||..+.. +.            
T Consensus        77 -~~d~vih~A~~~~-~~-~----~~~~~~~~~~nv~gt~~ll~~~~~~~-~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~  148 (322)
T PLN02986         77 -GCDAVFHTASPVF-FT-V----KDPQTELIDPALKGTINVLNTCKETP-SVKRVILTSSTAAVLFRQPPIEANDVVDET  148 (322)
T ss_pred             -CCCEEEEeCCCcC-CC-C----CCchhhhhHHHHHHHHHHHHHHHhcC-CccEEEEecchhheecCCccCCCCCCcCcc
Confidence             5899999999642 11 1    12235678999999999999987642 234899999986531 11            


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-CHHHHHHhh-ccC----CCCCC
Q 025259          155 ---------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-NDAVRKALE-GKT----LLNRL  219 (255)
Q Consensus       155 ---------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~-~~~----~~~~~  219 (255)
                               .+...|+.||.+.+.+++.+..+.  ++++..+.|+.+.++....... ......... ...    ....+
T Consensus       149 ~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  226 (322)
T PLN02986        149 FFSDPSLCRETKNWYPLSKILAENAAWEFAKDN--GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRF  226 (322)
T ss_pred             cCCChHHhhccccchHHHHHHHHHHHHHHHHHh--CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcce
Confidence                     013569999999999999988776  7999999999999886432111 112222221 111    11347


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ...+|+|++++.++....  . +..++++|+
T Consensus       227 v~v~Dva~a~~~al~~~~--~-~~~yni~~~  254 (322)
T PLN02986        227 VDVRDVALAHIKALETPS--A-NGRYIIDGP  254 (322)
T ss_pred             eEHHHHHHHHHHHhcCcc--c-CCcEEEecC
Confidence            889999999998886542  2 347788543

>PRK06720 hypothetical protein; Provisional

Probab=99.89  E-value=1.7e-21  Score=151.34  Aligned_cols=146  Identities=21%  Similarity=0.290  Sum_probs=120.4

Q ss_pred             cccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            3 KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         3 ~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.+|.+++++|+++||||++|||+++++.|++.|++|++++|+.+.+++..+++...+.+..++.+|+++.+++++++++
T Consensus         7 ~~~~~~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~   86 (169)
T PRK06720          7 EGVMKMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISI   86 (169)
T ss_pred             cCccccccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            34455678999999999999999999999999999999999998888888788876677788899999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---------CCCeEEEEcCcCcc
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---------KGSSVVFISSIAGY  151 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---------~~~~iv~vss~~~~  151 (255)
                      +.+.+|++|++|||||......++.+.++++ ++  ..|+.+.+.+.+.+.+++.         +.|++..||+..+.
T Consensus        87 ~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (169)
T PRK06720         87 TLNAFSRIDMLFQNAGLYKIDSIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS  161 (169)
T ss_pred             HHHHcCCCCEEEECCCcCCCCCcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence            9999999999999999876455555555555 44  6777777888888888753         35677777776543

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.88  E-value=1.4e-20  Score=163.49  Aligned_cols=224  Identities=13%  Similarity=0.049  Sum_probs=156.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEE-EEeCChhH--HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVV-ISSRKQKN--VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv-~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|||||+|+||++++++|+++|+.++ ++++....  .... ..+ ..+.++.++.+|++|.++++++++..     +
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   74 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSL-APV-AQSERFAFEKVDICDRAELARVFTEH-----Q   74 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhh-hhc-ccCCceEEEECCCcChHHHHHHHhhc-----C
Confidence            5799999999999999999999998854 55554321  1111 111 11335778899999999988887752     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-------CCCeEEEEcCcCccC----------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-------KGSSVVFISSIAGYQ----------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-------~~~~iv~vss~~~~~----------  152 (255)
                      +|+|||+||...     .+.+.+.+++.+++|+.+++.+++++.+.+.       ...++|++||...+.          
T Consensus        75 ~D~Vih~A~~~~-----~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~  149 (355)
T PRK10217         75 PDCVMHLAAESH-----VDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFT  149 (355)
T ss_pred             CCEEEECCcccC-----cchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcC
Confidence            999999999643     1233456788999999999999999987531       124899999864321          


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhh-cc-CC-------CCCCC
Q 025259          153 ---PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALE-GK-TL-------LNRLG  220 (255)
Q Consensus       153 ---~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~-~~-------~~~~~  220 (255)
                         +..+...|+.||.+.+.+++.++.++  ++++..+.|+.+..+........+.+..... .. .+       ...+.
T Consensus       150 E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i  227 (355)
T PRK10217        150 ETTPYAPSSPYSASKASSDHLVRAWLRTY--GLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWL  227 (355)
T ss_pred             CCCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcC
Confidence               22356789999999999999998876  6777778888776654211000011212122 11 11       23478


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+|+++++..++...   ..|+++++.+|...
T Consensus       228 ~v~D~a~a~~~~~~~~---~~~~~yni~~~~~~  257 (355)
T PRK10217        228 YVEDHARALYCVATTG---KVGETYNIGGHNER  257 (355)
T ss_pred             cHHHHHHHHHHHHhcC---CCCCeEEeCCCCcc
Confidence            8899999998887542   35789999888654

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.88  E-value=4.8e-20  Score=160.07  Aligned_cols=216  Identities=17%  Similarity=0.109  Sum_probs=155.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..+++++|||||+|+||++++++|+++|++|++++|+.+..+...+.+.. +.++.++.+|+++++++.++++       
T Consensus         7 ~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKE-GDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhcc-CCeEEEEECCCCCHHHHHHHHc-------
Confidence            46788999999999999999999999999999999987665555444432 4568889999999998877764       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHH--HHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC------------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVL--DKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP------------  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~------------  154 (255)
                      .+|+|||+|+...........+++++  ...++.|+.++..+++++.+.. ..+++|++||...+...            
T Consensus        79 ~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~-~~~~~v~~SS~~vyg~~~~~~~~~~~~~E  157 (353)
T PLN02896         79 GCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK-TVKRVVFTSSISTLTAKDSNGRWRAVVDE  157 (353)
T ss_pred             CCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC-CccEEEEEechhhccccccCCCCCCccCc
Confidence            58999999997542211122233333  4677888999999999998763 23589999997654211            


Q ss_pred             -------------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCC----
Q 025259          155 -------------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTL----  215 (255)
Q Consensus       155 -------------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~----  215 (255)
                                   ++...|+.||.+.+.+++.++.++  ++++..+.|+.+.+|......+.  ..+.....+...    
T Consensus       158 ~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~  235 (353)
T PLN02896        158 TCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN--GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSI  235 (353)
T ss_pred             ccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc--CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccccc
Confidence                         112379999999999999988776  79999999999988754322111  111111111110    


Q ss_pred             ---------CCCCCChHHHHHHHHHhcCC
Q 025259          216 ---------LNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       216 ---------~~~~~~~~~va~~~~~l~s~  235 (255)
                               ...+...+|+|++++.++..
T Consensus       236 ~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        236 LSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             ccccccccCceeEEeHHHHHHHHHHHHhC
Confidence                     11467899999999988854

>PLN02650 dihydroflavonol-4-reductase

Probab=99.87  E-value=2.7e-20  Score=161.50  Aligned_cols=210  Identities=19%  Similarity=0.121  Sum_probs=152.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.|++|||||+|+||++++++|+++|++|++++|+.+..+.........  ..++.++.+|+++.+.++++++       
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-------
Confidence            4789999999999999999999999999999999876655443322211  2357889999999998887765       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC----C---------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP----S---------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~----~---------  155 (255)
                      .+|++||+|+... ..   .  .+..++.+++|+.+++.+++++.+... ..+||++||...+.+.    +         
T Consensus        77 ~~d~ViH~A~~~~-~~---~--~~~~~~~~~~Nv~gt~~ll~aa~~~~~-~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~  149 (351)
T PLN02650         77 GCTGVFHVATPMD-FE---S--KDPENEVIKPTVNGMLSIMKACAKAKT-VRRIVFTSSAGTVNVEEHQKPVYDEDCWSD  149 (351)
T ss_pred             CCCEEEEeCCCCC-CC---C--CCchhhhhhHHHHHHHHHHHHHHhcCC-ceEEEEecchhhcccCCCCCCccCcccCCc
Confidence            5899999998642 11   1  122356789999999999999988641 2489999987543210    0         


Q ss_pred             ---------CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHH--Hhhcc------CCCCC
Q 025259          156 ---------AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRK--ALEGK------TLLNR  218 (255)
Q Consensus       156 ---------~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~------~~~~~  218 (255)
                               +...|+.||.+.+.+++.++.++  ++++..+.|+.+.+|.............  .....      .....
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  227 (351)
T PLN02650        150 LDFCRRKKMTGWMYFVSKTLAEKAAWKYAAEN--GLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQ  227 (351)
T ss_pred             hhhhhccccccchHHHHHHHHHHHHHHHHHHc--CCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcc
Confidence                     12379999999999999998876  8999999999999886433222111111  01111      11246


Q ss_pred             CCChHHHHHHHHHhcCCC
Q 025259          219 LGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~  236 (255)
                      +...+|++++++.++...
T Consensus       228 ~v~V~Dva~a~~~~l~~~  245 (351)
T PLN02650        228 FVHLDDLCNAHIFLFEHP  245 (351)
T ss_pred             eeeHHHHHHHHHHHhcCc
Confidence            789999999999988653

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.87  E-value=4.2e-20  Score=164.53  Aligned_cols=231  Identities=13%  Similarity=0.089  Sum_probs=160.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh---H----H---------HHHHHHHHH-cCCeEEEEEec
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK---N----V---------DKAVEKLKA-LGIEVIGIICH   69 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~---~----~---------~~~~~~~~~-~~~~~~~~~~D   69 (255)
                      ...++++++|||||+|+||++++++|+++|++|+++++...   .    .         .+..+.+.+ .+.++.++.+|
T Consensus        42 ~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~D  121 (442)
T PLN02572         42 SSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGD  121 (442)
T ss_pred             CccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECC
Confidence            34678999999999999999999999999999999875321   0    0         001111111 23468889999


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           70 VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|.+.+.++++..     ++|+|||+|+...  .+....++++++..+++|+.|++++++++...-. ..++|++||..
T Consensus       122 l~d~~~v~~~l~~~-----~~D~ViHlAa~~~--~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv-~~~~V~~SS~~  193 (442)
T PLN02572        122 ICDFEFLSEAFKSF-----EPDAVVHFGEQRS--APYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAP-DCHLVKLGTMG  193 (442)
T ss_pred             CCCHHHHHHHHHhC-----CCCEEEECCCccc--ChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEecce
Confidence            99999999888863     6999999997632  3344555666788899999999999999987532 23799999876


Q ss_pred             ccC------------------------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc----
Q 025259          150 GYQ------------------------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL----  201 (255)
Q Consensus       150 ~~~------------------------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~----  201 (255)
                      .+.                        +..+...|+.||.+.+.+++.++..+  ++++..+.|+.+.++......    
T Consensus       194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~--gl~~v~lR~~~vyGp~~~~~~~~~~  271 (442)
T PLN02572        194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVRTDETMMDEE  271 (442)
T ss_pred             ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc--CCCEEEEecccccCCCCcccccccc
Confidence            442                        11234579999999999999887776  789999999998887532100    


Q ss_pred             -------------CCHHHHHHhh-ccC-C-------CCCCCChHHHHHHHHHhcCCCCCCccc--cEEeeCC
Q 025259          202 -------------GNDAVRKALE-GKT-L-------LNRLGTTGNMAAAIAFLASDDASYITG--ETLVVAG  249 (255)
Q Consensus       202 -------------~~~~~~~~~~-~~~-~-------~~~~~~~~~va~~~~~l~s~~~~~~~G--~~i~~dg  249 (255)
                                   ....+..+.. +.. .       ...+...+|++++++.++....  ..|  .++++.+
T Consensus       272 li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~--~~g~~~i~Nigs  341 (442)
T PLN02572        272 LINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA--KPGEFRVFNQFT  341 (442)
T ss_pred             cccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh--hcCceeEEEeCC
Confidence                         0011112211 211 1       1256788999999998886421  234  4677754

>PLN02214 cinnamoyl-CoA reductase

Probab=99.86  E-value=8.3e-20  Score=157.88  Aligned_cols=217  Identities=18%  Similarity=0.097  Sum_probs=155.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH-HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++++++||||+|+||++++++|+++|++|++++|+.+.... ....+.....++.++.+|+++++++..+++      
T Consensus         7 ~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   80 (342)
T PLN02214          7 SPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID------   80 (342)
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh------
Confidence            3678999999999999999999999999999999998664332 122232223467889999999999887776      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-------------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-------------  154 (255)
                       ++|+|||+|+...          +++.+.+++|+.++..+++++...-  ..+||++||..+..+.             
T Consensus        81 -~~d~Vih~A~~~~----------~~~~~~~~~nv~gt~~ll~aa~~~~--v~r~V~~SS~~avyg~~~~~~~~~~~E~~  147 (342)
T PLN02214         81 -GCDGVFHTASPVT----------DDPEQMVEPAVNGAKFVINAAAEAK--VKRVVITSSIGAVYMDPNRDPEAVVDESC  147 (342)
T ss_pred             -cCCEEEEecCCCC----------CCHHHHHHHHHHHHHHHHHHHHhcC--CCEEEEeccceeeeccCCCCCCcccCccc
Confidence             5999999999631          1356779999999999999998753  3489999997543211             


Q ss_pred             --------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCC-----CCCC
Q 025259          155 --------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTL-----LNRL  219 (255)
Q Consensus       155 --------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~-----~~~~  219 (255)
                              .+...|+.||.+.+.+++.++.++  ++++..+.|+.+..+........  ...........+     ...+
T Consensus       148 ~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  225 (342)
T PLN02214        148 WSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK--GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAY  225 (342)
T ss_pred             CCChhhccccccHHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCe
Confidence                    023469999999999999988776  78999999999988753221111  111111112111     1246


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      ...+|+|++++.++....  . |..+++.+
T Consensus       226 i~V~Dva~a~~~al~~~~--~-~g~yn~~~  252 (342)
T PLN02214        226 VDVRDVALAHVLVYEAPS--A-SGRYLLAE  252 (342)
T ss_pred             eEHHHHHHHHHHHHhCcc--c-CCcEEEec
Confidence            788999999998886432  2 33555654

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.86  E-value=5.6e-20  Score=149.50  Aligned_cols=224  Identities=14%  Similarity=0.031  Sum_probs=164.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe--EEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGAS--VVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~--Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|||||+|.||+++++.+.++...  |+.+|.- .....+..+.+.. ..++.++++|++|.+.+.+++++-     .
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~-~~~~~fv~~DI~D~~~v~~~~~~~-----~   74 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVED-SPRYRFVQGDICDRELVDRLFKEY-----Q   74 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhc-CCCceEEeccccCHHHHHHHHHhc-----C
Confidence            47899999999999999999988653  6666653 1111222233322 358999999999999999988864     7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-------------CCCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-------------QPPSA  156 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-------------~~~~~  156 (255)
                      +|+++|-|+...     .|.+.++-...+++|+.|++.++++++.+-.+ -++++||.-..+             .++.+
T Consensus        75 ~D~VvhfAAESH-----VDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~-frf~HISTDEVYG~l~~~~~~FtE~tp~~P  148 (340)
T COG1088          75 PDAVVHFAAESH-----VDRSIDGPAPFIQTNVVGTYTLLEAARKYWGK-FRFHHISTDEVYGDLGLDDDAFTETTPYNP  148 (340)
T ss_pred             CCeEEEechhcc-----ccccccChhhhhhcchHHHHHHHHHHHHhccc-ceEEEeccccccccccCCCCCcccCCCCCC
Confidence            999999999764     34455556677999999999999999987531 479999865433             35678


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc--CCC-------CCCCChHHHHH
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK--TLL-------NRLGTTGNMAA  227 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~-------~~~~~~~~va~  227 (255)
                      .++|++|||+-+.|++++..-+  |+++....+..-..|...+..-.+-........  .|.       +.+.-.+|=+.
T Consensus       149 sSPYSASKAasD~lVray~~TY--glp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~  226 (340)
T COG1088         149 SSPYSASKAASDLLVRAYVRTY--GLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCR  226 (340)
T ss_pred             CCCcchhhhhHHHHHHHHHHHc--CCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHH
Confidence            8999999999999999999998  889999999888877654322122222222222  222       34566789999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++..++...   -.|+++++.||+..
T Consensus       227 ai~~Vl~kg---~~GE~YNIgg~~E~  249 (340)
T COG1088         227 AIDLVLTKG---KIGETYNIGGGNER  249 (340)
T ss_pred             HHHHHHhcC---cCCceEEeCCCccc
Confidence            888888653   23999999999875

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.86  E-value=1.1e-19  Score=157.12  Aligned_cols=224  Identities=15%  Similarity=0.101  Sum_probs=149.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |++|||||+|+||++++++|++.|++|++++|+.+.     ++...+.+.. .+.++.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999999998642     2211111111 1345889999999999998888864   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-cCCCeEEEEcCcCccC-----------CC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQ-----------PP  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~iv~vss~~~~~-----------~~  154 (255)
                        ++|++||+|+... ..    .+.+.-...+++|+.++..+++++.+.- ++..++|++||...+.           +.
T Consensus        78 --~~d~ViH~Aa~~~-~~----~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~  150 (343)
T TIGR01472        78 --KPTEIYNLAAQSH-VK----VSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPF  150 (343)
T ss_pred             --CCCEEEECCcccc-cc----hhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCC
Confidence              5899999999754 11    1122235677899999999999998753 3334799999875432           22


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCC----CcEEEEEeCCcccChhhhhhcCCHHHHHHhh-c---------cCCCCCCC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAQALLGNDAVRKALE-G---------KTLLNRLG  220 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~----~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~---------~~~~~~~~  220 (255)
                      .+...|+.||.+.+.+++.++.+++-    .+.++...|+.-.. +....  ...+..... +         ......+.
T Consensus       151 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~g~g~~~rd~i  227 (343)
T TIGR01472       151 YPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGEN-FVTRK--ITRAAAKIKLGLQEKLYLGNLDAKRDWG  227 (343)
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCcc-ccchH--HHHHHHHHHcCCCCceeeCCCccccCce
Confidence            35678999999999999999887632    12334444542111 00000  011111111 1         11234577


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+|++++++.++....    +..+++.+|...
T Consensus       228 ~V~D~a~a~~~~~~~~~----~~~yni~~g~~~  256 (343)
T TIGR01472       228 HAKDYVEAMWLMLQQDK----PDDYVIATGETH  256 (343)
T ss_pred             eHHHHHHHHHHHHhcCC----CccEEecCCCce
Confidence            88999999988875431    357888877654

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.86  E-value=1.8e-19  Score=155.52  Aligned_cols=211  Identities=16%  Similarity=0.092  Sum_probs=150.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHH--HHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE--KLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~--~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+++++|||||+|+||++++++|+++|++|+++.|+.+.......  .+.. ..++.++.+|++|++++.++++     
T Consensus         6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~d~~~~~~~~~-----   79 (338)
T PLN00198          6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQE-LGDLKIFGADLTDEESFEAPIA-----   79 (338)
T ss_pred             CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCC-CCceEEEEcCCCChHHHHHHHh-----
Confidence            4568999999999999999999999999999988888654332221  1111 1357889999999998877665     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-------------
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-------------  153 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-------------  153 (255)
                        ++|++||+|+...    ...  .+.+.+.+++|+.++..+++++.+.. ..+++|++||...+..             
T Consensus        80 --~~d~vih~A~~~~----~~~--~~~~~~~~~~nv~g~~~ll~a~~~~~-~~~~~v~~SS~~~~g~~~~~~~~~~~~E~  150 (338)
T PLN00198         80 --GCDLVFHVATPVN----FAS--EDPENDMIKPAIQGVHNVLKACAKAK-SVKRVILTSSAAAVSINKLSGTGLVMNEK  150 (338)
T ss_pred             --cCCEEEEeCCCCc----cCC--CChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeecceeeeccCCCCCCceeccc
Confidence              5899999998532    111  12345678999999999999998753 2358999999765431             


Q ss_pred             -----------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccC------
Q 025259          154 -----------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKT------  214 (255)
Q Consensus       154 -----------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~------  214 (255)
                                 .++...|+.||.+.+.+++.++.++  ++++..+.|+.+.+|......+.  ........+..      
T Consensus       151 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PLN00198        151 NWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGL  228 (338)
T ss_pred             cCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhc--CceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccc
Confidence                       1234569999999999999988875  78999999999988753211111  01111111110      


Q ss_pred             ---C----CCCCCChHHHHHHHHHhcCCC
Q 025259          215 ---L----LNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       215 ---~----~~~~~~~~~va~~~~~l~s~~  236 (255)
                         +    ...+...+|++++++.++...
T Consensus       229 ~~~~~~~~~~~~i~V~D~a~a~~~~~~~~  257 (338)
T PLN00198        229 KGMQMLSGSISITHVEDVCRAHIFLAEKE  257 (338)
T ss_pred             cccccccCCcceeEHHHHHHHHHHHhhCc
Confidence               0    125788999999999888653

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.86  E-value=1.2e-19  Score=151.56  Aligned_cols=223  Identities=19%  Similarity=0.169  Sum_probs=170.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK--AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++|+||||+|.||++++++|+++|+.|.++.|+++..+.  ...+++..+.+...+..|++++++++.+++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            78999999999999999999999999999999999988554  456666566679999999999999999888       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-C-----------C
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-S-----------A  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-~-----------~  156 (255)
                      +.|+|+|.|.......    .+  .-.+.++.++.|+.++++++...- .-.|||++||.++.... +           .
T Consensus        78 gcdgVfH~Asp~~~~~----~~--~e~~li~pav~Gt~nVL~ac~~~~-sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~  150 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFDL----ED--PEKELIDPAVKGTKNVLEACKKTK-SVKRVVYTSSTAAVRYNGPNIGENSVVDEES  150 (327)
T ss_pred             CCCEEEEeCccCCCCC----CC--cHHhhhhHHHHHHHHHHHHHhccC-CcceEEEeccHHHhccCCcCCCCCccccccc
Confidence            7999999999754211    11  223679999999999999999764 33589999999987543 1           1


Q ss_pred             C----------hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccC-----CCCCC
Q 025259          157 M----------AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKT-----LLNRL  219 (255)
Q Consensus       157 ~----------~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~-----~~~~~  219 (255)
                      |          ..|..||.-.+.-++.++.|-  ++....|.|+.|-+|........  ......+.+..     ....+
T Consensus       151 wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~--~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~  228 (327)
T KOG1502|consen  151 WSDLDFCRCKKLWYALSKTLAEKAAWEFAKEN--GLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAF  228 (327)
T ss_pred             CCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhC--CccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceee
Confidence            1          259999999999998888885  68999999999999877662221  11222222211     11236


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ...+|||.+-++++.....  .|+.|-+....
T Consensus       229 VdVrDVA~AHv~a~E~~~a--~GRyic~~~~~  258 (327)
T KOG1502|consen  229 VDVRDVALAHVLALEKPSA--KGRYICVGEVV  258 (327)
T ss_pred             EeHHHHHHHHHHHHcCccc--CceEEEecCcc
Confidence            7889999999999976543  38877766554

>PLN02583 cinnamoyl-CoA reductase

Probab=99.86  E-value=1.1e-19  Score=154.32  Aligned_cols=217  Identities=14%  Similarity=0.042  Sum_probs=151.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN--VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+|+++||||+|+||++++++|+++|++|+++.|+.+.  ..+....+...+.++.++.+|++|.+++.+++.       
T Consensus         5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-------   77 (297)
T PLN02583          5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-------   77 (297)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-------
Confidence            47899999999999999999999999999999986432  222233332224468889999999998876554       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC---C---------C
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP---S---------A  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~---~---------~  156 (255)
                      ..|.++|.++...   .   .+ .++++++++|+.+++.+++++.+.+ ..++||++||..+....   +         .
T Consensus        78 ~~d~v~~~~~~~~---~---~~-~~~~~~~~~nv~gt~~ll~aa~~~~-~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~  149 (297)
T PLN02583         78 GCSGLFCCFDPPS---D---YP-SYDEKMVDVEVRAAHNVLEACAQTD-TIEKVVFTSSLTAVIWRDDNISTQKDVDERS  149 (297)
T ss_pred             CCCEEEEeCccCC---c---cc-ccHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEecchHheecccccCCCCCCCCccc
Confidence            6899998765421   1   11 2467899999999999999999875 23589999998764211   0         0


Q ss_pred             C----------hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC--CCCCCCChHH
Q 025259          157 M----------AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT--LLNRLGTTGN  224 (255)
Q Consensus       157 ~----------~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  224 (255)
                      +          ..|+.||...+.+++.++.+.  ++++++|.|+++.++......  . .........  ....+...+|
T Consensus       150 ~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~--gi~~v~lrp~~v~Gp~~~~~~--~-~~~~~~~~~~~~~~~~v~V~D  224 (297)
T PLN02583        150 WSDQNFCRKFKLWHALAKTLSEKTAWALAMDR--GVNMVSINAGLLMGPSLTQHN--P-YLKGAAQMYENGVLVTVDVNF  224 (297)
T ss_pred             CCCHHHHhhcccHHHHHHHHHHHHHHHHHHHh--CCcEEEEcCCcccCCCCCCch--h-hhcCCcccCcccCcceEEHHH
Confidence            1          159999999999999887664  899999999999887542211  0 000000000  1123678899


Q ss_pred             HHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          225 MAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       225 va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      +|++.+..+....  ..| .+.+-++
T Consensus       225 va~a~~~al~~~~--~~~-r~~~~~~  247 (297)
T PLN02583        225 LVDAHIRAFEDVS--SYG-RYLCFNH  247 (297)
T ss_pred             HHHHHHHHhcCcc--cCC-cEEEecC
Confidence            9999998886432  234 4544444

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.85  E-value=1.7e-19  Score=156.30  Aligned_cols=229  Identities=14%  Similarity=0.023  Sum_probs=159.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH----c-CCeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA----L-GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~----~-~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .++++++|||||+|.||++++++|+++|++|++++|...........+..    . ..++.++.+|+++.+.+..+++  
T Consensus        12 ~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~--   89 (348)
T PRK15181         12 VLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK--   89 (348)
T ss_pred             cccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh--
Confidence            46779999999999999999999999999999999865432222222211    1 1357889999999888777765  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC----------
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP----------  153 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~----------  153 (255)
                           .+|+|||.|+......     +.++....+++|+.++..+++++...  .-.++|++||...+..          
T Consensus        90 -----~~d~ViHlAa~~~~~~-----~~~~~~~~~~~Nv~gt~nll~~~~~~--~~~~~v~~SS~~vyg~~~~~~~~e~~  157 (348)
T PRK15181         90 -----NVDYVLHQAALGSVPR-----SLKDPIATNSANIDGFLNMLTAARDA--HVSSFTYAASSSTYGDHPDLPKIEER  157 (348)
T ss_pred             -----CCCEEEECccccCchh-----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeechHhhCCCCCCCCCCCC
Confidence                 5899999999643111     12234457999999999999998865  2348999998754421          


Q ss_pred             -CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh--c--CCHHHHHHhhccCC---------CCCC
Q 025259          154 -PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL--L--GNDAVRKALEGKTL---------LNRL  219 (255)
Q Consensus       154 -~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~--~--~~~~~~~~~~~~~~---------~~~~  219 (255)
                       ..+...|+.+|.+.+.+++.++.+.  ++++..+.|+.+..|.....  .  ..+.+..+.....+         ...+
T Consensus       158 ~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~  235 (348)
T PRK15181        158 IGRPLSPYAVTKYVNELYADVFARSY--EFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDF  235 (348)
T ss_pred             CCCCCChhhHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEee
Confidence             1244679999999999999887765  78999999998887643211  0  01222222222111         1235


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+|++++++..+........|+++++.+|...
T Consensus       236 i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~~  269 (348)
T PRK15181        236 CYIENVIQANLLSATTNDLASKNKVYNVAVGDRT  269 (348)
T ss_pred             EEHHHHHHHHHHHHhcccccCCCCEEEecCCCcE
Confidence            6679999998876643222346899999887654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.85  E-value=2.2e-19  Score=153.07  Aligned_cols=222  Identities=16%  Similarity=0.058  Sum_probs=154.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +++||||+|+||++++++|++.|  ++|++++|.... -.+..+.+.. ..++.++.+|+++++++.++++..     ++
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   74 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLED-NPRYRFVKGDIGDRELVSRLFTEH-----QP   74 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhcc-CCCcEEEEcCCcCHHHHHHHHhhc-----CC
Confidence            48999999999999999999987  678888764311 1111112211 235778899999999998887753     59


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------CCCCCh
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------PPSAMA  158 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------~~~~~~  158 (255)
                      |+|||+|+... .    +.+.+..+..+++|+.++..+++++...+. ..++|++||...+.            +..+..
T Consensus        75 d~vi~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~  148 (317)
T TIGR01181        75 DAVVHFAAESH-V----DRSISGPAAFIETNVVGTYTLLEAVRKYWH-EFRFHHISTDEVYGDLEKGDAFTETTPLAPSS  148 (317)
T ss_pred             CEEEEcccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEeeccceeCCCCCCCCcCCCCCCCCCC
Confidence            99999999643 1    223345667899999999999999887653 24799999865332            122445


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC---------CCCCChHHHHHHH
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL---------NRLGTTGNMAAAI  229 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va~~~  229 (255)
                      .|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+......-.+.+........+.         ..+...+|+++++
T Consensus       149 ~Y~~sK~~~e~~~~~~~~~~--~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~  226 (317)
T TIGR01181       149 PYSASKAASDHLVRAYHRTY--GLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAI  226 (317)
T ss_pred             chHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHH
Confidence            79999999999999988776  789999999988776432110011222222222111         1356689999999


Q ss_pred             HHhcCCCCCCccccEEeeCCCcc
Q 025259          230 AFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ..++...   ..|+++++.+|..
T Consensus       227 ~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       227 YLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             HHHHcCC---CCCceEEeCCCCc
Confidence            9888643   3578899987754

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.85  E-value=2.8e-19  Score=153.16  Aligned_cols=210  Identities=19%  Similarity=0.136  Sum_probs=149.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH--cCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA--LGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++|++|||||+|+||++++++|+++|+.|++++|+.+...........  ...++.++.+|+++++++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            478999999999999999999999999999999986554332221111  12468899999999998877766       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc--cCCCC-----------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG--YQPPS-----------  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~--~~~~~-----------  155 (255)
                      ++|++||+|+... .. .  .  +..++.+++|+.++..+++++.... ...++|++||..+  +.+.+           
T Consensus        76 ~~d~Vih~A~~~~-~~-~--~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~  148 (322)
T PLN02662         76 GCEGVFHTASPFY-HD-V--T--DPQAELIDPAVKGTLNVLRSCAKVP-SVKRVVVTSSMAAVAYNGKPLTPDVVVDETW  148 (322)
T ss_pred             CCCEEEEeCCccc-CC-C--C--ChHHHHHHHHHHHHHHHHHHHHhCC-CCCEEEEccCHHHhcCCCcCCCCCCcCCccc
Confidence            5899999999643 11 1  1  1125778999999999999988753 2348999999753  21110           


Q ss_pred             ---C------ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-CHH-HHHHhhccC----CCCCCC
Q 025259          156 ---A------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-NDA-VRKALEGKT----LLNRLG  220 (255)
Q Consensus       156 ---~------~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-~~~-~~~~~~~~~----~~~~~~  220 (255)
                         +      ...|+.+|...+.+++.+..+.  ++++..+.|+.+.++....... ... .........    ....+.
T Consensus       149 ~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  226 (322)
T PLN02662        149 FSDPAFCEESKLWYVLSKTLAEEAAWKFAKEN--GIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWV  226 (322)
T ss_pred             CCChhHhhcccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeE
Confidence               1      1469999999999998887765  7899999999999886432111 111 111111111    123478


Q ss_pred             ChHHHHHHHHHhcCCC
Q 025259          221 TTGNMAAAIAFLASDD  236 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~  236 (255)
                      ..+|+|++++.++...
T Consensus       227 ~v~Dva~a~~~~~~~~  242 (322)
T PLN02662        227 DVRDVANAHIQAFEIP  242 (322)
T ss_pred             EHHHHHHHHHHHhcCc
Confidence            8899999999888653

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.85  E-value=3.3e-19  Score=156.80  Aligned_cols=226  Identities=17%  Similarity=0.151  Sum_probs=180.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .-++||++|||||+|.||+++++++++.+.. +++++|++-++-....++++.  ..+..++.+|+.|.+.++.+++.. 
T Consensus       246 ~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~-  324 (588)
T COG1086         246 AMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH-  324 (588)
T ss_pred             hHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC-
Confidence            4578999999999999999999999999876 889999999999998888875  468889999999999999998854 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                          ++|+++|.|+.-.  -|..+..   ..+.+++|+.|+.++++++...-.  .++|.+|+-.+..|   -..||++|
T Consensus       325 ----kvd~VfHAAA~KH--VPl~E~n---P~Eai~tNV~GT~nv~~aa~~~~V--~~~V~iSTDKAV~P---tNvmGaTK  390 (588)
T COG1086         325 ----KVDIVFHAAALKH--VPLVEYN---PEEAIKTNVLGTENVAEAAIKNGV--KKFVLISTDKAVNP---TNVMGATK  390 (588)
T ss_pred             ----CCceEEEhhhhcc--CcchhcC---HHHHHHHhhHhHHHHHHHHHHhCC--CEEEEEecCcccCC---chHhhHHH
Confidence                7999999999732  2343433   456699999999999999998643  48999999877766   46799999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC--------CCCCChHHHHHHHHHhcCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL--------NRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~s~  235 (255)
                      ...+.++++++..... +-++.+|..|.|-..-.   +--+-+.++..+..|.        +.+++..|.++.++.-...
T Consensus       391 r~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG---SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~  467 (588)
T COG1086         391 RLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG---SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAI  467 (588)
T ss_pred             HHHHHHHHHHhhccCCCCcEEEEEEecceecCCC---CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhh
Confidence            9999999999998776 78999999998865432   2234455666555443        4467778888888776544


Q ss_pred             CCCCccccEEeeCCCccCC
Q 025259          236 DASYITGETLVVAGGMASR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                         .-.|+++.+|=|-+.+
T Consensus       468 ---~~gGeifvldMGepvk  483 (588)
T COG1086         468 ---AKGGEIFVLDMGEPVK  483 (588)
T ss_pred             ---cCCCcEEEEcCCCCeE
Confidence               3568999998876654

>PLN02240 UDP-glucose 4-epimerase

Probab=99.85  E-value=4.5e-19  Score=153.79  Aligned_cols=233  Identities=19%  Similarity=0.189  Sum_probs=155.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+++|+++||||+|+||++++++|++.|++|++++|...........+..    .+.++.++.+|+++++++..+++.. 
T Consensus         2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~-   80 (352)
T PLN02240          2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST-   80 (352)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC-
Confidence            45689999999999999999999999999999998764333222222221    2346788999999999998887752 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------C
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------P  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~  153 (255)
                          .+|++||+|+... .    ..+.+.+.+.+++|+.++..+++++...  ...++|++||...+.           +
T Consensus        81 ----~~d~vih~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~vyg~~~~~~~~E~~~  149 (352)
T PLN02240         81 ----RFDAVIHFAGLKA-V----GESVAKPLLYYDNNLVGTINLLEVMAKH--GCKKLVFSSSATVYGQPEEVPCTEEFP  149 (352)
T ss_pred             ----CCCEEEEccccCC-c----cccccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEccHHHhCCCCCCCCCCCCC
Confidence                7999999999643 1    1233456788999999999999987653  234899999964332           1


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhh-----h--hcCC---HHHHHHhhccC---------
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQ-----A--LLGN---DAVRKALEGKT---------  214 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~-----~--~~~~---~~~~~~~~~~~---------  214 (255)
                      ..+...|+.+|.+.+.+++.++.+. .++++..+.|+.+..+...     .  ....   +..........         
T Consensus       150 ~~~~~~Y~~sK~~~e~~~~~~~~~~-~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  228 (352)
T PLN02240        150 LSATNPYGRTKLFIEEICRDIHASD-PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGND  228 (352)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCC
Confidence            2345789999999999999987652 1456666665444332100     0  0000   11111111111         


Q ss_pred             -------CCCCCCChHHHHHHHHHhcCCC--CCCccccEEeeCCCccCC
Q 025259          215 -------LLNRLGTTGNMAAAIAFLASDD--ASYITGETLVVAGGMASR  254 (255)
Q Consensus       215 -------~~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG~~~~  254 (255)
                             ....+...+|++++++.++...  .....|+++++.+|...+
T Consensus       229 ~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s  277 (352)
T PLN02240        229 YPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTS  277 (352)
T ss_pred             CCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEe
Confidence                   1123567899999888776432  122457899998886643

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.83  E-value=8.9e-19  Score=151.99  Aligned_cols=223  Identities=13%  Similarity=0.034  Sum_probs=151.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|||||+|+||++++++|+++|+. |+.+++...  ..+... .+. .+.++.++.+|++|.+++.++++..     .+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA-DVS-DSERYVFEHADICDRAELDRIFAQH-----QP   74 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH-hcc-cCCceEEEEecCCCHHHHHHHHHhc-----CC
Confidence            5999999999999999999999987 555665321  122111 111 1345778899999999998888752     69


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-------CCCeEEEEcCcCccC-----------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-------KGSSVVFISSIAGYQ-----------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-------~~~~iv~vss~~~~~-----------  152 (255)
                      |++||+|+......     +.+..++.+++|+.++..+++++.++++       ...++|++||...+.           
T Consensus        75 d~vih~A~~~~~~~-----~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~  149 (352)
T PRK10084         75 DAVMHLAAESHVDR-----SITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENS  149 (352)
T ss_pred             CEEEECCcccCCcc-----hhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccccccc
Confidence            99999999743111     1223467899999999999999998752       124799999864332           


Q ss_pred             ----------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC--C-----
Q 025259          153 ----------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT--L-----  215 (255)
Q Consensus       153 ----------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--~-----  215 (255)
                                +..+...|+.+|.+.+.+++.++.++  ++++..+.|+.+..+........+.+........  +     
T Consensus       150 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~g  227 (352)
T PRK10084        150 EELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (352)
T ss_pred             ccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeCCC
Confidence                      11345689999999999999998876  5666667777776654211000111212222111  1     


Q ss_pred             --CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          216 --LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       216 --~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                        ...+...+|+++++..++...   ..|+++++.++...
T Consensus       228 ~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~~~  264 (352)
T PRK10084        228 DQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHNEK  264 (352)
T ss_pred             CeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCCcC
Confidence              123678899999998887542   34788999877653

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.83  E-value=8.9e-20  Score=150.95  Aligned_cols=220  Identities=19%  Similarity=0.202  Sum_probs=156.8

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CC--eEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           15 AVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GI--EVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ||||||+|.||++++++|++.+. .++++++++..+-.+..++.+.    +.  .+.++.+|++|.+.+++++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            79999999999999999999986 4999999999999998888532    12  2356789999999999988864    


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                       ++|+++|.|+.-.  -++.+..   ..+.+++|+.|+.++++++..+-  -.++|++|+-.+..|   ...|++||...
T Consensus        77 -~pdiVfHaAA~Kh--Vpl~E~~---p~eav~tNv~GT~nv~~aa~~~~--v~~~v~ISTDKAv~P---tnvmGatKrla  145 (293)
T PF02719_consen   77 -KPDIVFHAAALKH--VPLMEDN---PFEAVKTNVLGTQNVAEAAIEHG--VERFVFISTDKAVNP---TNVMGATKRLA  145 (293)
T ss_dssp             -T-SEEEE--------HHHHCCC---HHHHHHHHCHHHHHHHHHHHHTT---SEEEEEEECGCSS-----SHHHHHHHHH
T ss_pred             -CCCEEEEChhcCC--CChHHhC---HHHHHHHHHHHHHHHHHHHHHcC--CCEEEEccccccCCC---CcHHHHHHHHH
Confidence             7999999999732  2344433   35669999999999999999874  349999999877665   47899999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC--------CCCCChHHHHHHHHHhcCCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL--------NRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +.++++.+...+. +.++.+|..|.|-..-   .+-.+-+.++..+..|+        +.+++++|.++.+..-+...  
T Consensus       146 E~l~~~~~~~~~~~~t~f~~VRFGNVlgS~---GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~~--  220 (293)
T PF02719_consen  146 EKLVQAANQYSGNSDTKFSSVRFGNVLGSR---GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAALA--  220 (293)
T ss_dssp             HHHHHHHCCTSSSS--EEEEEEE-EETTGT---TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH---
T ss_pred             HHHHHHHhhhCCCCCcEEEEEEecceecCC---CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhhC--
Confidence            9999999988765 7899999999886532   12235566666666554        45789999999888765432  


Q ss_pred             CccccEEeeCCCccCCC
Q 025259          239 YITGETLVVAGGMASRL  255 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~~  255 (255)
                       ..|+++.+|=|.+.+|
T Consensus       221 -~~geifvl~mg~~v~I  236 (293)
T PF02719_consen  221 -KGGEIFVLDMGEPVKI  236 (293)
T ss_dssp             --TTEEEEE---TCEEC
T ss_pred             -CCCcEEEecCCCCcCH
Confidence             4589999998776553

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02686 cinnamoyl-CoA reductase

Probab=99.83  E-value=1.4e-18  Score=151.61  Aligned_cols=226  Identities=15%  Similarity=0.134  Sum_probs=153.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ...++|++|||||+|+||++++++|+++|++|+++.|+.+..+.+ .++...      +..+.++.+|++|.+++.++++
T Consensus        49 ~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~  127 (367)
T PLN02686         49 ADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFD  127 (367)
T ss_pred             cCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHH
Confidence            456799999999999999999999999999999888887655544 222221      1357889999999999888776


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc--c-----C--
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG--Y-----Q--  152 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~--~-----~--  152 (255)
                             .+|.++|.++...... ...    ......++|+.++..+++++...- .-.++|++||..+  +     .  
T Consensus       128 -------~~d~V~hlA~~~~~~~-~~~----~~~~~~~~nv~gt~~llea~~~~~-~v~r~V~~SS~~~~vyg~~~~~~~  194 (367)
T PLN02686        128 -------GCAGVFHTSAFVDPAG-LSG----YTKSMAELEAKASENVIEACVRTE-SVRKCVFTSSLLACVWRQNYPHDL  194 (367)
T ss_pred             -------hccEEEecCeeecccc-ccc----ccchhhhhhHHHHHHHHHHHHhcC-CccEEEEeccHHHhcccccCCCCC
Confidence                   4789999998753111 110    112446789999999999987642 1238999999631  1     0  


Q ss_pred             C--------------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC--
Q 025259          153 P--------------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL--  216 (255)
Q Consensus       153 ~--------------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~--  216 (255)
                      +              ..+...|+.||.+.+.+++.++.+.  +++++.+.|+++.+|......+ ...........+.  
T Consensus       195 ~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--gl~~v~lRp~~vyGp~~~~~~~-~~~~~~~~g~~~~~g  271 (367)
T PLN02686        195 PPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGK--GLKLATICPALVTGPGFFRRNS-TATIAYLKGAQEMLA  271 (367)
T ss_pred             CcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhc--CceEEEEcCCceECCCCCCCCC-hhHHHHhcCCCccCC
Confidence            0              0123469999999999999888765  8999999999999985322111 1111222121111  


Q ss_pred             ---CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          217 ---NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       217 ---~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                         ..+...+|++++++.++........|.++ +-+|.
T Consensus       272 ~g~~~~v~V~Dva~A~~~al~~~~~~~~~~~y-i~~g~  308 (367)
T PLN02686        272 DGLLATADVERLAEAHVCVYEAMGNKTAFGRY-ICFDH  308 (367)
T ss_pred             CCCcCeEEHHHHHHHHHHHHhccCCCCCCCcE-EEeCC
Confidence               13677899999998887532112235555 43333

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.82  E-value=3.3e-18  Score=147.55  Aligned_cols=228  Identities=15%  Similarity=0.123  Sum_probs=151.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||+|+||++++++|+++|++|++++|..+........+.+. +.++.++.+|++|++++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            5999999999999999999999999998887543333322333332 34567889999999998887764     36999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------C-CCChhh
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------P-SAMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~-~~~~~y  160 (255)
                      +||+|+... ...    ..+...+.+++|+.++..+++++...  ...++|++||...+..           . .+...|
T Consensus        77 vvh~a~~~~-~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y  149 (338)
T PRK10675         77 VIHFAGLKA-VGE----SVQKPLEYYDNNVNGTLRLISAMRAA--NVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPY  149 (338)
T ss_pred             EEECCcccc-ccc----hhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhhCCCCCCccccccCCCCCCChh
Confidence            999999753 111    12334567899999999999988764  2348999999754321           1 346789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc-------CC---HHHHHHhhccC----------------
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL-------GN---DAVRKALEGKT----------------  214 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~-------~~---~~~~~~~~~~~----------------  214 (255)
                      +.+|.+.+.+++.++.+.. ++++..+.|+.+.++.....+       ..   +..........                
T Consensus       150 ~~sK~~~E~~~~~~~~~~~-~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (338)
T PRK10675        150 GKSKLMVEQILTDLQKAQP-DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCc
Confidence            9999999999999876642 456666665444432110000       00   11111111110                


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          215 LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       215 ~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ....+...+|+|++++.++........|+++++.+|...+
T Consensus       229 ~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s  268 (338)
T PRK10675        229 GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSS  268 (338)
T ss_pred             EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCcee
Confidence            0124678899999888777542222346899998886543

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.80  E-value=2.4e-17  Score=143.10  Aligned_cols=220  Identities=18%  Similarity=0.171  Sum_probs=150.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHH---HHHHHHHHHcC--------CeEEEEEecCCCHH------
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNV---DKAVEKLKALG--------IEVIGIICHVSNEQ------   74 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~---~~~~~~~~~~~--------~~~~~~~~D~~~~~------   74 (255)
                      +++||||+|+||++++++|++.|  ++|+++.|+.+..   ++..+.++...        .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            58999999999999999999999  6799999986532   23333333221        47889999998653      


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP  154 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~  154 (255)
                      ....+.       ..+|++||||+.....        ..+++.+++|+.++..+++.+...-  ..+++++||...+...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~--------~~~~~~~~~nv~g~~~ll~~a~~~~--~~~~v~iSS~~v~~~~  143 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV--------YPYSELRAANVLGTREVLRLAASGR--AKPLHYVSTISVLAAI  143 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC--------CcHHHHhhhhhHHHHHHHHHHhhCC--CceEEEEccccccCCc
Confidence            332222       3699999999975311        2256678899999999999887643  2369999998765331


Q ss_pred             ----------------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHH-HHh-----hc
Q 025259          155 ----------------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVR-KAL-----EG  212 (255)
Q Consensus       155 ----------------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~~-----~~  212 (255)
                                      .....|+.+|.+.+.+++.+...   +++++.+.||.+.++............ ...     ..
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~  220 (367)
T TIGR01746       144 DLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDR---GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALG  220 (367)
T ss_pred             CCCCccccccccccccccCCChHHHHHHHHHHHHHHHhc---CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhC
Confidence                            11346999999999999876654   899999999999875221111111111 110     11


Q ss_pred             cCCC-----CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          213 KTLL-----NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       213 ~~~~-----~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..|.     ..+...+|++++++.++.......+|+++++.++...
T Consensus       221 ~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~  266 (367)
T TIGR01746       221 AYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPV  266 (367)
T ss_pred             CCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCCC
Confidence            1121     2267789999999999866544355899999886543

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PLN02427 UDP-apiose/xylose synthase

Probab=99.80  E-value=3.6e-18  Score=150.06  Aligned_cols=225  Identities=14%  Similarity=0.074  Sum_probs=152.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHH-HcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLK-ALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++++.++||||||+|.||++++++|+++ |+.|++++|+.+..+....... ....++.++.+|++|.+.+.++++    
T Consensus        10 ~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~----   85 (386)
T PLN02427         10 KPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK----   85 (386)
T ss_pred             CcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh----
Confidence            3466778999999999999999999998 5899999987655433221100 112368899999999988877665    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------  154 (255)
                         .+|+|||+|+... .....    .+-.+.+..|+.++..+++++...-   .++|++||...+...           
T Consensus        86 ---~~d~ViHlAa~~~-~~~~~----~~~~~~~~~n~~gt~~ll~aa~~~~---~r~v~~SS~~vYg~~~~~~~~e~~p~  154 (386)
T PLN02427         86 ---MADLTINLAAICT-PADYN----TRPLDTIYSNFIDALPVVKYCSENN---KRLIHFSTCEVYGKTIGSFLPKDHPL  154 (386)
T ss_pred             ---cCCEEEEcccccC-hhhhh----hChHHHHHHHHHHHHHHHHHHHhcC---CEEEEEeeeeeeCCCcCCCCCccccc
Confidence               4899999999643 11111    1122446789999999999887542   489999997543210           


Q ss_pred             ----------------------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc-------C-C-
Q 025259          155 ----------------------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL-------G-N-  203 (255)
Q Consensus       155 ----------------------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~-------~-~-  203 (255)
                                            .+...|+.+|.+.+.+++.++...  ++++..+.|+.+..+......       . . 
T Consensus       155 ~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~  232 (386)
T PLN02427        155 RQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAEN--GLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPR  232 (386)
T ss_pred             ccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhc--CCceEEecccceeCCCCCccccccccccccch
Confidence                                  012369999999999998776554  789999999988877421100       0 0 


Q ss_pred             --HHHHHHhhccCC---------CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          204 --DAVRKALEGKTL---------LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       204 --~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                        ..+........+         ...+...+|+|++++.++... ....|+++++.+|
T Consensus       233 ~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        233 VLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             HHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence              011122222211         124678899999999887542 1245789999876

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.79  E-value=1.3e-17  Score=142.90  Aligned_cols=210  Identities=18%  Similarity=0.125  Sum_probs=149.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++++||||+|+||+++++.|++.|++|++++|+.+.....    .  ...+.++.+|+++++++.++++       .+|+
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~--~~~~~~~~~D~~~~~~l~~~~~-------~~d~   67 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL----E--GLDVEIVEGDLRDPASLRKAVA-------GCRA   67 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc----c--cCCceEEEeeCCCHHHHHHHHh-------CCCE
Confidence            3699999999999999999999999999999987653221    1  1247789999999998877765       6899


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC---------------CC
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS---------------AM  157 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~---------------~~  157 (255)
                      +||+++...   .    ..+++++.+++|+.++..+++++....  .+++|++||...+.+.+               ..
T Consensus        68 vi~~a~~~~---~----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~  138 (328)
T TIGR03466        68 LFHVAADYR---L----WAPDPEEMYAANVEGTRNLLRAALEAG--VERVVYTSSVATLGVRGDGTPADETTPSSLDDMI  138 (328)
T ss_pred             EEEeceecc---c----CCCCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEechhhcCcCCCCCCcCccCCCCccccc
Confidence            999998532   1    112356778999999999999988642  34899999976553210               13


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH-HHHHHhhccCC-----CCCCCChHHHHHHHHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND-AVRKALEGKTL-----LNRLGTTGNMAAAIAF  231 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~~~va~~~~~  231 (255)
                      ..|+.+|.+.+.+++.++.+.  ++++..+.|+.+.++......... ..........+     ...+...+|+|+++..
T Consensus       139 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~  216 (328)
T TIGR03466       139 GHYKRSKFLAEQAALEMAAEK--GLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLL  216 (328)
T ss_pred             ChHHHHHHHHHHHHHHHHHhc--CCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHH
Confidence            479999999999999987764  788999999988765322111111 11121111111     1235678999999888


Q ss_pred             hcCCCCCCccccEEeeCC
Q 025259          232 LASDDASYITGETLVVAG  249 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dg  249 (255)
                      ++...   ..|+.+.+.|
T Consensus       217 ~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       217 ALERG---RIGERYILGG  231 (328)
T ss_pred             HHhCC---CCCceEEecC
Confidence            87553   3578888753

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.79  E-value=1.6e-17  Score=142.18  Aligned_cols=226  Identities=15%  Similarity=0.078  Sum_probs=154.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+++|++|++++|...........+...+ ++..+.+|+++++++.++++.     +++|++
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   74 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERIT-RVTFVEGDLRDRELLDRLFEE-----HKIDAV   74 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhcccc-ceEEEECCCCCHHHHHHHHHh-----CCCcEE
Confidence            47999999999999999999999999988765433222222222212 577889999999999888774     479999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~  162 (255)
                      |||||... ..    .+.++..+.++.|+.++..+++++.+.  ...++|++||...+..           ..+...|+.
T Consensus        75 v~~ag~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~  147 (328)
T TIGR01179        75 IHFAGLIA-VG----ESVQDPLKYYRNNVVNTLNLLEAMQQT--GVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGR  147 (328)
T ss_pred             EECccccC-cc----hhhcCchhhhhhhHHHHHHHHHHHHhc--CCCEEEEecchhhcCCCCCCCccccCCCCCCCchHH
Confidence            99999753 11    123345677899999999999987764  2358999988654321           123467999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc-----CCH----HHHHHhh-ccC---------C------CC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL-----GND----AVRKALE-GKT---------L------LN  217 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~-----~~~----~~~~~~~-~~~---------~------~~  217 (255)
                      +|++.+.+++.++.+. .++++..+.|+.+.++.....+     ...    .+..... ...         +      ..
T Consensus       148 sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  226 (328)
T TIGR01179       148 SKLMSERILRDLSKAD-PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR  226 (328)
T ss_pred             HHHHHHHHHHHHHHhc-cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence            9999999999998762 3788999999877765321110     011    1111111 100         1      02


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+...+|+++++..++........|+++++.+|.+.
T Consensus       227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~  262 (328)
T TIGR01179       227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGF  262 (328)
T ss_pred             eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcc
Confidence            356789999999988854323345788998777554

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.79  E-value=2.9e-17  Score=136.08  Aligned_cols=202  Identities=14%  Similarity=0.096  Sum_probs=134.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~   86 (255)
                      ...++++++||||+|+||++++++|++.|++|+++.|+.+..+....    .+.++.++.+|+++. +.+.   +.+.  
T Consensus        13 ~~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~l~---~~~~--   83 (251)
T PLN00141         13 ENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP----QDPSLQIVRADVTEGSDKLV---EAIG--   83 (251)
T ss_pred             ccccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc----cCCceEEEEeeCCCCHHHHH---HHhh--
Confidence            45678999999999999999999999999999999998766543221    134688899999983 3322   2220  


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC---CCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ---PPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~---~~~~~~~y~~s  163 (255)
                       .++|++|+++|......+.         ..+++|+.+...+++++...  +.++||++||...+.   +.+....|...
T Consensus        84 -~~~d~vi~~~g~~~~~~~~---------~~~~~n~~~~~~ll~a~~~~--~~~~iV~iSS~~v~g~~~~~~~~~~~~~~  151 (251)
T PLN00141         84 -DDSDAVICATGFRRSFDPF---------APWKVDNFGTVNLVEACRKA--GVTRFILVSSILVNGAAMGQILNPAYIFL  151 (251)
T ss_pred             -cCCCEEEECCCCCcCCCCC---------CceeeehHHHHHHHHHHHHc--CCCEEEEEccccccCCCcccccCcchhHH
Confidence             2699999999864311111         12468888999999988643  346899999986432   22234456666


Q ss_pred             HHHHHHHHHHHHHH--hCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e--~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |.....+...+..|  +.. +++++.|.||++.++........      ...........+++|+|+.+..++...
T Consensus       152 ~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~------~~~~~~~~~~i~~~dvA~~~~~~~~~~  221 (251)
T PLN00141        152 NLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM------EPEDTLYEGSISRDQVAEVAVEALLCP  221 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE------CCCCccccCcccHHHHHHHHHHHhcCh
Confidence            65444433333333  334 89999999999987643211100      001111234689999999999998653

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.78  E-value=2e-17  Score=138.84  Aligned_cols=218  Identities=17%  Similarity=0.151  Sum_probs=155.0

Q ss_pred             EEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           16 VVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        16 lVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      |||||+|.+|++++++|++.|  ..|.++++.......  ..+... ....++.+|++|++++.++++       +.|++
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~~~~-~~~~~~~~Di~d~~~l~~a~~-------g~d~V   70 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDLQKS-GVKEYIQGDITDPESLEEALE-------GVDVV   70 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhhhcc-cceeEEEeccccHHHHHHHhc-------CCceE
Confidence            699999999999999999999  678888887654221  122222 123389999999999998887       68999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------------CCC
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------------PSA  156 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------------~~~  156 (255)
                      ||+|+......      ....++++++|+.|+-++++++...  .-.++|++||..+..+                 ...
T Consensus        71 ~H~Aa~~~~~~------~~~~~~~~~vNV~GT~nvl~aa~~~--~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~  142 (280)
T PF01073_consen   71 FHTAAPVPPWG------DYPPEEYYKVNVDGTRNVLEAARKA--GVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSP  142 (280)
T ss_pred             EEeCccccccC------cccHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcCcceeEeccCCCCcccCCcCCcccccc
Confidence            99999754221      3446778999999999999999975  3348999999987543                 013


Q ss_pred             ChhhHHhHHHHHHHHHHHHH-HhCC--CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc---------CCCCCCCChHH
Q 025259          157 MAMYGVTKTALLGLTKALAA-EMAP--DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK---------TLLNRLGTTGN  224 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~-e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~  224 (255)
                      ...|+.||+..|.++..... ++..  .++..+|.|..|..|......+  ...+.....         .-...+...++
T Consensus       143 ~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~--~~~~~~~~g~~~~~~g~~~~~~~~vyV~N  220 (280)
T PF01073_consen  143 LDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVP--RLVKMVRSGLFLFQIGDGNNLFDFVYVEN  220 (280)
T ss_pred             cCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccc--hhhHHHHhcccceeecCCCceECcEeHHH
Confidence            45799999999999988765 2222  5899999999998875333221  111111111         11123667899


Q ss_pred             HHHHHHHhcC---CC--CCCccccEEeeCCCccC
Q 025259          225 MAAAIAFLAS---DD--ASYITGETLVVAGGMAS  253 (255)
Q Consensus       225 va~~~~~l~s---~~--~~~~~G~~i~~dgG~~~  253 (255)
                      +|++.+-.+.   ..  .....||.+.+..|-+.
T Consensus       221 vA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~p~  254 (280)
T PF01073_consen  221 VAHAHVLAAQALLEPGKPERVAGQAYFITDGEPV  254 (280)
T ss_pred             HHHHHHHHHHHhccccccccCCCcEEEEECCCcc
Confidence            9997764322   22  45689999999887654

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.77  E-value=2.1e-17  Score=135.13  Aligned_cols=212  Identities=21%  Similarity=0.227  Sum_probs=158.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      ||||||+|.||.+++++|+++|+.|+.+.|............     ++.++.+|+.+.+.++++++..     .+|.+|
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi   70 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVI   70 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-----TEEEEESETTSHHHHHHHHHHH-----TESEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-----eEEEEEeecccccccccccccc-----CceEEE
Confidence            799999999999999999999999887777765433222211     6889999999999999999875     799999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCChhhHHh
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~~y~~s  163 (255)
                      |+|+...     ...+.+...+.++.|+.++..+++++...-.  .++|++||...+...           .+...|+.+
T Consensus        71 ~~a~~~~-----~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~--~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~  143 (236)
T PF01370_consen   71 HLAAFSS-----NPESFEDPEEIIEANVQGTRNLLEAAREAGV--KRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGAS  143 (236)
T ss_dssp             EEBSSSS-----HHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHH
T ss_pred             Eeecccc-----ccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence            9999642     1112355678899999999999999987532  589999997554322           245669999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChh---hhhhcCCHHHHHHhhccCC---------CCCCCChHHHHHHHHH
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF---AQALLGNDAVRKALEGKTL---------LNRLGTTGNMAAAIAF  231 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~---~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  231 (255)
                      |...+.+++.+..+.  ++++..+.|+.+..+.   .........+........+         ...+...+|+++++++
T Consensus       144 K~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~  221 (236)
T PF01370_consen  144 KRAAEELLRDYAKKY--GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVA  221 (236)
T ss_dssp             HHHHHHHHHHHHHHH--TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHH
T ss_pred             ccccccccccccccc--ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHH
Confidence            999999999999887  8899999999998887   1111111233333332221         1234667999999999


Q ss_pred             hcCCCCCCccccEEee
Q 025259          232 LASDDASYITGETLVV  247 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~  247 (255)
                      ++....  ..|+++++
T Consensus       222 ~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  222 ALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHSC--TTTEEEEE
T ss_pred             HHhCCC--CCCCEEEe
Confidence            997655  67888876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.76  E-value=1.5e-16  Score=137.84  Aligned_cols=216  Identities=11%  Similarity=0.072  Sum_probs=147.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++||||||+|.||++++++|++. |++|++++|+.+.....    .. ...+.++.+|++ +.+.+.++++       ++
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~----~~-~~~~~~~~~Dl~~~~~~~~~~~~-------~~   69 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDL----VN-HPRMHFFEGDITINKEWIEYHVK-------KC   69 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHh----cc-CCCeEEEeCCCCCCHHHHHHHHc-------CC
Confidence            46999999999999999999986 69999999876443221    11 235788899998 6666555443       69


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC----------------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP----------------  154 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~----------------  154 (255)
                      |+|||+|+... ...    ..++.+..+++|+.++..+++++...   +.++|++||...+...                
T Consensus        70 d~ViH~aa~~~-~~~----~~~~p~~~~~~n~~~~~~ll~aa~~~---~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~  141 (347)
T PRK11908         70 DVILPLVAIAT-PAT----YVKQPLRVFELDFEANLPIVRSAVKY---GKHLVFPSTSEVYGMCPDEEFDPEASPLVYGP  141 (347)
T ss_pred             CEEEECcccCC-hHH----hhcCcHHHHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeccCCCcCcCccccccccCc
Confidence            99999999743 111    11233566899999999999988864   2489999997543210                


Q ss_pred             --CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-----C---HHHHHHhhccC---------C
Q 025259          155 --SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-----N---DAVRKALEGKT---------L  215 (255)
Q Consensus       155 --~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-----~---~~~~~~~~~~~---------~  215 (255)
                        ++...|+.+|.+.+.+++.++.+.  ++++..+.|+.+..+.......     .   ..+...+....         .
T Consensus       142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~  219 (347)
T PRK11908        142 INKPRWIYACSKQLMDRVIWAYGMEE--GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQ  219 (347)
T ss_pred             CCCccchHHHHHHHHHHHHHHHHHHc--CCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCce
Confidence              112369999999999999987665  6777778887776654221100     0   12222222111         1


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          216 LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       216 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ...+...+|+++++..++........|+++++.++
T Consensus       220 ~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        220 KRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             eeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence            23478899999999998865433356899999875

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.76  E-value=8.9e-17  Score=150.10  Aligned_cols=219  Identities=12%  Similarity=0.062  Sum_probs=152.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH-HHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH-RKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g   88 (255)
                      ++++||||||+|.||++++++|+++ |++|++++|........    .. ..++.++.+|++|..+ ++++++       
T Consensus       314 ~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~----~~-~~~~~~~~gDl~d~~~~l~~~l~-------  381 (660)
T PRK08125        314 RRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRF----LG-HPRFHFVEGDISIHSEWIEYHIK-------  381 (660)
T ss_pred             cCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhh----cC-CCceEEEeccccCcHHHHHHHhc-------
Confidence            5778999999999999999999986 79999999977543221    11 2357888999998655 343333       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC--------------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP--------------  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~--------------  154 (255)
                      ++|++||+|+... ....    .+..++.+++|+.++..+++++...-   .++|++||...+...              
T Consensus       382 ~~D~ViHlAa~~~-~~~~----~~~~~~~~~~Nv~~t~~ll~a~~~~~---~~~V~~SS~~vyg~~~~~~~~E~~~~~~~  453 (660)
T PRK08125        382 KCDVVLPLVAIAT-PIEY----TRNPLRVFELDFEENLKIIRYCVKYN---KRIIFPSTSEVYGMCTDKYFDEDTSNLIV  453 (660)
T ss_pred             CCCEEEECccccC-chhh----ccCHHHHHHhhHHHHHHHHHHHHhcC---CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence            6999999999754 1111    12234568999999999999998752   489999997543210              


Q ss_pred             ----CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc----C----CHHHHHHhhccCC-------
Q 025259          155 ----SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL----G----NDAVRKALEGKTL-------  215 (255)
Q Consensus       155 ----~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~----~----~~~~~~~~~~~~~-------  215 (255)
                          .+...|+.||.+.+.+++.++.++  ++++..+.|+.+..+......    .    ...+........+       
T Consensus       454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g  531 (660)
T PRK08125        454 GPINKQRWIYSVSKQLLDRVIWAYGEKE--GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGG  531 (660)
T ss_pred             CCCCCCccchHHHHHHHHHHHHHHHHhc--CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCC
Confidence                112369999999999999987776  688999999988876432110    0    1122222221111       


Q ss_pred             --CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          216 --LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 --~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                        ...+...+|+++++..++........|+++++.+|.
T Consensus       532 ~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~  569 (660)
T PRK08125        532 KQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPD  569 (660)
T ss_pred             ceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCC
Confidence              123678899999998888654333568999998874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.76  E-value=1.4e-16  Score=149.28  Aligned_cols=227  Identities=12%  Similarity=0.004  Sum_probs=155.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+++++||||||+|.||++++++|++.  |++|+.++|..  +..+.....  ....++.++.+|++|.+.+..++..  
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~--~~~~~v~~~~~Dl~d~~~~~~~~~~--   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPS--KSSPNFKFVKGDIASADLVNYLLIT--   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhc--ccCCCeEEEECCCCChHHHHHHHhh--
Confidence            467899999999999999999999988  67888888753  222221110  1134688899999998887665432  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                         .++|+|||+|+.....     ....+..+.+++|+.++..+++++...- ...++|++||...+..           
T Consensus        79 ---~~~D~ViHlAa~~~~~-----~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~vkr~I~~SS~~vyg~~~~~~~~~~~E  149 (668)
T PLN02260         79 ---EGIDTIMHFAAQTHVD-----NSFGNSFEFTKNNIYGTHVLLEACKVTG-QIRRFIHVSTDEVYGETDEDADVGNHE  149 (668)
T ss_pred             ---cCCCEEEECCCccCch-----hhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEEcchHHhCCCccccccCccc
Confidence               2799999999975311     1122335678999999999999987642 2358999999754321           


Q ss_pred             ---CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC---------CCCCCC
Q 025259          154 ---PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL---------LNRLGT  221 (255)
Q Consensus       154 ---~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  221 (255)
                         ..+...|+.+|.+.+.+++.+..++  ++++..+.|+.+..+-.....-.+.+........+         ...+..
T Consensus       150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~--~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ih  227 (668)
T PLN02260        150 ASQLLPTNPYSATKAGAEMLVMAYGRSY--GLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLY  227 (668)
T ss_pred             cCCCCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEE
Confidence               1234579999999999999887765  78889999998887642111001112222221111         123567


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+|+++++..++...   ..|+++++.++...
T Consensus       228 V~Dva~a~~~~l~~~---~~~~vyni~~~~~~  256 (668)
T PLN02260        228 CEDVAEAFEVVLHKG---EVGHVYNIGTKKER  256 (668)
T ss_pred             HHHHHHHHHHHHhcC---CCCCEEEECCCCee
Confidence            899999998887542   34789999877554

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.74  E-value=8.5e-17  Score=140.50  Aligned_cols=218  Identities=14%  Similarity=0.060  Sum_probs=149.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++||||||+|.||++++++|.++|+.|++++|.....      +........++.+|+++.+.+..+++       ++
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~------~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   86 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH------MSEDMFCHEFHLVDLRVMENCLKVTK-------GV   86 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc------cccccccceEEECCCCCHHHHHHHHh-------CC
Confidence            578999999999999999999999999999999864321      11111124567899999887666553       58


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------------C
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------------P  153 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------------~  153 (255)
                      |+|||+|+... ......   ......+..|+.++..+++++...  ...++|++||...+.                 +
T Consensus        87 D~Vih~Aa~~~-~~~~~~---~~~~~~~~~N~~~t~nll~aa~~~--~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p  160 (370)
T PLN02695         87 DHVFNLAADMG-GMGFIQ---SNHSVIMYNNTMISFNMLEAARIN--GVKRFFYASSACIYPEFKQLETNVSLKESDAWP  160 (370)
T ss_pred             CEEEEcccccC-Cccccc---cCchhhHHHHHHHHHHHHHHHHHh--CCCEEEEeCchhhcCCccccCcCCCcCcccCCC
Confidence            99999998643 111111   122345778999999999988754  234899999874321                 2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc----CCHHHHHHhhc-cCC---------CCCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL----GNDAVRKALEG-KTL---------LNRL  219 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~-~~~---------~~~~  219 (255)
                      ..+...|+.+|.+.+.+++.++..+  ++++..+.|+.+..+......    ....+...... ..+         ...+
T Consensus       161 ~~p~s~Yg~sK~~~E~~~~~~~~~~--g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~  238 (370)
T PLN02695        161 AEPQDAYGLEKLATEELCKHYTKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSF  238 (370)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeE
Confidence            3345689999999999999887765  789999999988887421100    01122222211 111         1235


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+|+++++.+++...    .++.+++.+|...
T Consensus       239 i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~~  268 (370)
T PLN02695        239 TFIDECVEGVLRLTKSD----FREPVNIGSDEMV  268 (370)
T ss_pred             EeHHHHHHHHHHHHhcc----CCCceEecCCCce
Confidence            77899999999887542    2577888777553

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.73  E-value=2.5e-15  Score=112.13  Aligned_cols=217  Identities=15%  Similarity=0.166  Sum_probs=171.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC--
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG--   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   88 (255)
                      ..++++|-||-+.+|++++..|.+.++.|.-+|..+.+         + -+.-+.+..|-+=.|+-++.++++.+.++  
T Consensus         2 sagrVivYGGkGALGSacv~~FkannywV~siDl~eNe---------~-Ad~sI~V~~~~swtEQe~~v~~~vg~sL~ge   71 (236)
T KOG4022|consen    2 SAGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENE---------Q-ADSSILVDGNKSWTEQEQSVLEQVGSSLQGE   71 (236)
T ss_pred             CCceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccc---------c-ccceEEecCCcchhHHHHHHHHHHHHhhccc
Confidence            35789999999999999999999999999888876532         1 12234566666667777788888887663  


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|.++|-||...........-.+.-+-+++-.++..-.-.+....+++++|-+-..+...+..+.|+.-.|+.+|+|+.
T Consensus        72 kvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVH  151 (236)
T KOG4022|consen   72 KVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVH  151 (236)
T ss_pred             ccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHH
Confidence            69999999987541111111222335667888888888888888889999898888888888999999999999999999


Q ss_pred             HHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          169 GLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       169 ~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      .++++|+.+-.  | |--+..|.|-..||||.+.+.++.+          ...+...+.+++....+..+.++--+|..+
T Consensus       152 qLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~AD----------fssWTPL~fi~e~flkWtt~~~RPssGsLl  221 (236)
T KOG4022|consen  152 QLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPNAD----------FSSWTPLSFISEHFLKWTTETSRPSSGSLL  221 (236)
T ss_pred             HHHHHhcccccCCCCCceeEEEeeeeccCccccccCCCCc----------ccCcccHHHHHHHHHHHhccCCCCCCCceE
Confidence            99999998854  3 7889999999999999999887654          344667789999999888887777888776


Q ss_pred             ee
Q 025259          246 VV  247 (255)
Q Consensus       246 ~~  247 (255)
                      .+
T Consensus       222 qi  223 (236)
T KOG4022|consen  222 QI  223 (236)
T ss_pred             EE
Confidence            65

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.72  E-value=6.4e-16  Score=131.69  Aligned_cols=214  Identities=14%  Similarity=0.145  Sum_probs=141.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH--HcCCCcE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE--KYGRIDV   92 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~~d~   92 (255)
                      ||||||+|.||++++++|+++|+.++++.|+....... .         .+..+|+.|..+.+.+++.+.+  .++++|+
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~   71 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V---------NLVDLDIADYMDKEDFLAQIMAGDDFGDIEA   71 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-H---------hhhhhhhhhhhhHHHHHHHHhcccccCCccE
Confidence            79999999999999999999999766655544322111 1         1134567766665655555542  3457999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~  161 (255)
                      |||+|+... ..   ....   +..+++|+.++..+++++...   +.++|++||...+..           ..+...|+
T Consensus        72 Vih~A~~~~-~~---~~~~---~~~~~~n~~~t~~ll~~~~~~---~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~  141 (308)
T PRK11150         72 IFHEGACSS-TT---EWDG---KYMMDNNYQYSKELLHYCLER---EIPFLYASSAATYGGRTDDFIEEREYEKPLNVYG  141 (308)
T ss_pred             EEECceecC-Cc---CCCh---HHHHHHHHHHHHHHHHHHHHc---CCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHH
Confidence            999999643 21   1112   346899999999999998864   236999999754321           22446799


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-C---HHHHHHhhcc-CC---------CCCCCChHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-N---DAVRKALEGK-TL---------LNRLGTTGNMAA  227 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-~---~~~~~~~~~~-~~---------~~~~~~~~~va~  227 (255)
                      .+|.+.+.+++.+..+.  ++++..+.|+.+..+....... .   ..+....... .+         ...+...+|+++
T Consensus       142 ~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~  219 (308)
T PRK11150        142 YSKFLFDEYVRQILPEA--NSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAA  219 (308)
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHH
Confidence            99999999998887654  6888888888887764321100 0   1121222211 11         123578899999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++..++...    .+.++++.+|...+
T Consensus       220 a~~~~~~~~----~~~~yni~~~~~~s  242 (308)
T PRK11150        220 VNLWFWENG----VSGIFNCGTGRAES  242 (308)
T ss_pred             HHHHHHhcC----CCCeEEcCCCCcee
Confidence            988887542    24589998776543

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.72  E-value=9.2e-16  Score=136.56  Aligned_cols=221  Identities=14%  Similarity=0.033  Sum_probs=147.6

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH-HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .+-.+.++++||||||+|.||++++++|+++|++|++++|......+ ....+  ...++.++..|+.++.     +   
T Consensus       112 ~~~~~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~--~~~~~~~i~~D~~~~~-----l---  181 (442)
T PLN02206        112 PLGLKRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHF--SNPNFELIRHDVVEPI-----L---  181 (442)
T ss_pred             ccccccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhc--cCCceEEEECCccChh-----h---
Confidence            34445678999999999999999999999999999998875332211 11111  1245777888987652     1   


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------  152 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------  152 (255)
                          ..+|+|||+|+... ... ..   .+..+.+++|+.++..+++++...-   .++|++||...+.           
T Consensus       182 ----~~~D~ViHlAa~~~-~~~-~~---~~p~~~~~~Nv~gt~nLleaa~~~g---~r~V~~SS~~VYg~~~~~p~~E~~  249 (442)
T PLN02206        182 ----LEVDQIYHLACPAS-PVH-YK---FNPVKTIKTNVVGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLQHPQVETY  249 (442)
T ss_pred             ----cCCCEEEEeeeecc-hhh-hh---cCHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECChHHhCCCCCCCCCccc
Confidence                15899999999653 111 11   1235678999999999999988652   3899999986542           


Q ss_pred             -----CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCC---------C
Q 025259          153 -----PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTL---------L  216 (255)
Q Consensus       153 -----~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~  216 (255)
                           +..+...|+.+|.+.+.+++.+..+.  ++++..+.|+.+..+.......  ...+........+         .
T Consensus       250 ~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~--g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~  327 (442)
T PLN02206        250 WGNVNPIGVRSCYDEGKRTAETLTMDYHRGA--NVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQT  327 (442)
T ss_pred             cccCCCCCccchHHHHHHHHHHHHHHHHHHh--CCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEE
Confidence                 11224579999999999998876665  6788888887776653210000  1122222222111         1


Q ss_pred             CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+...+|+|+++..++...    .+..+++.+|...
T Consensus       328 rdfi~V~Dva~ai~~a~e~~----~~g~yNIgs~~~~  360 (442)
T PLN02206        328 RSFQFVSDLVEGLMRLMEGE----HVGPFNLGNPGEF  360 (442)
T ss_pred             EeEEeHHHHHHHHHHHHhcC----CCceEEEcCCCce
Confidence            23677899999999887543    2347998877543

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.72  E-value=4.3e-16  Score=127.50  Aligned_cols=156  Identities=20%  Similarity=0.174  Sum_probs=124.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      .+||||||+|-||++++.+|++.|+.|+++|.-.....+....++     ..+++.|+.|.+.+++++++-     ++|.
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-----~~f~~gDi~D~~~L~~vf~~~-----~ida   70 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-----FKFYEGDLLDRALLTAVFEEN-----KIDA   70 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-----CceEEeccccHHHHHHHHHhc-----CCCE
Confidence            479999999999999999999999999999998766555444332     578999999999999888874     8999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----------CCCCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------QPPSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----------~~~~~~~~y~  161 (255)
                      +||.||...     ..+|.+.-.+.++.|+.|++.+++++...-.+  ++||-||.+.+           .+..+..+|+
T Consensus        71 ViHFAa~~~-----VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~--~~vFSStAavYG~p~~~PI~E~~~~~p~NPYG  143 (329)
T COG1087          71 VVHFAASIS-----VGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK--KFIFSSTAAVYGEPTTSPISETSPLAPINPYG  143 (329)
T ss_pred             EEECccccc-----cchhhhCHHHHHhhchHhHHHHHHHHHHhCCC--EEEEecchhhcCCCCCcccCCCCCCCCCCcch
Confidence            999999754     34566777888999999999999999987433  67776665543           2234566899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEE
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCV  187 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v  187 (255)
                      .||-..|.+.+.+++...  .++..+
T Consensus       144 ~sKlm~E~iL~d~~~a~~--~~~v~L  167 (329)
T COG1087         144 RSKLMSEEILRDAAKANP--FKVVIL  167 (329)
T ss_pred             hHHHHHHHHHHHHHHhCC--CcEEEE
Confidence            999999999999998863  444433

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.72  E-value=4.6e-16  Score=136.64  Aligned_cols=209  Identities=16%  Similarity=0.150  Sum_probs=145.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK--AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++++||||+|+||++++++|+++|++|+++.|+.+..+.  ...++.....++.++.+|++|++++.++++..   .
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~---~  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE---G  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh---C
Confidence            457799999999999999999999999999999998765431  11222222346788999999999998888753   1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +++|+||||++...  ..        ..+.+++|+.++..+++++...  ...++|++||.....   +...|..+|...
T Consensus       135 ~~~D~Vi~~aa~~~--~~--------~~~~~~vn~~~~~~ll~aa~~~--gv~r~V~iSS~~v~~---p~~~~~~sK~~~  199 (390)
T PLN02657        135 DPVDVVVSCLASRT--GG--------VKDSWKIDYQATKNSLDAGREV--GAKHFVLLSAICVQK---PLLEFQRAKLKF  199 (390)
T ss_pred             CCCcEEEECCccCC--CC--------CccchhhHHHHHHHHHHHHHHc--CCCEEEEEeeccccC---cchHHHHHHHHH
Confidence            26999999998532  11        1123567888988998888754  235899999986543   345688899988


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC----------CCCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL----------LNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +...+.    ...+++...+.|+.+..++..       ..+......+          ...+...+|+|.++..++....
T Consensus       200 E~~l~~----~~~gl~~tIlRp~~~~~~~~~-------~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~  268 (390)
T PLN02657        200 EAELQA----LDSDFTYSIVRPTAFFKSLGG-------QVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES  268 (390)
T ss_pred             HHHHHh----ccCCCCEEEEccHHHhcccHH-------HHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc
Confidence            887654    123899999999876643321       1111111111          1124677899999888875432


Q ss_pred             CCccccEEeeCC
Q 025259          238 SYITGETLVVAG  249 (255)
Q Consensus       238 ~~~~G~~i~~dg  249 (255)
                        ..|+++++.|
T Consensus       269 --~~~~~~~Igg  278 (390)
T PLN02657        269 --KINKVLPIGG  278 (390)
T ss_pred             --ccCCEEEcCC
Confidence              3578999976

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.71  E-value=8.4e-16  Score=131.08  Aligned_cols=216  Identities=16%  Similarity=0.136  Sum_probs=144.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ||||||+|.||++++++|++.|+ .|++++|..+.. .    +.+..  ...+..|+.+++.++.+.+.   .+.++|++
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~----~~~~~--~~~~~~d~~~~~~~~~~~~~---~~~~~D~v   70 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-K----FLNLA--DLVIADYIDKEDFLDRLEKG---AFGKIEAI   70 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-h----hhhhh--heeeeccCcchhHHHHHHhh---ccCCCCEE
Confidence            68999999999999999999998 688887765321 1    11111  12456788887776665553   34589999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+|+... .      +.++.+..+++|+.++..+++++...   +.++|++||...+..           ..+...|+.
T Consensus        71 vh~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~~~~~~---~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~  140 (314)
T TIGR02197        71 FHQGACSD-T------TETDGEYMMENNYQYSKRLLDWCAEK---GIPFIYASSAATYGDGEAGFREGRELERPLNVYGY  140 (314)
T ss_pred             EECccccC-c------cccchHHHHHHHHHHHHHHHHHHHHh---CCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHH
Confidence            99999642 1      12345678899999999999998764   237999999764421           125668999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--C--HHHHHHhhccCC---------------CCCCCChH
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--N--DAVRKALEGKTL---------------LNRLGTTG  223 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--~--~~~~~~~~~~~~---------------~~~~~~~~  223 (255)
                      +|...+.+++....+...++++..+.|+.+..+.......  .  ..+........+               ...+...+
T Consensus       141 sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (314)
T TIGR02197       141 SKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVK  220 (314)
T ss_pred             HHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHH
Confidence            9999999998754443335678888888777654211000  0  111112111110               12467789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+++++..++..    ..+.++++.++...+
T Consensus       221 D~a~~i~~~~~~----~~~~~yni~~~~~~s  247 (314)
T TIGR02197       221 DVVDVNLWLLEN----GVSGIFNLGTGRARS  247 (314)
T ss_pred             HHHHHHHHHHhc----ccCceEEcCCCCCcc
Confidence            999999998865    246789998876544

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.70  E-value=1.8e-15  Score=128.90  Aligned_cols=211  Identities=19%  Similarity=0.164  Sum_probs=148.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC-cEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI-DVF   93 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~-d~l   93 (255)
                      ||||||+|.||++++++|++.|+.|++++|.........       ..+.++.+|+++.+....+++       .. |.+
T Consensus         3 ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           3 ILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL-------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             EEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc-------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            999999999999999999999999999999876543322       356778899999865555544       23 999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCCh--hh
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMA--MY  160 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~--~y  160 (255)
                      ||+|+......  ...+  ...+.+.+|+.++..+++++..  ....++|+.||.....+.           +..+  .|
T Consensus        69 ih~aa~~~~~~--~~~~--~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Y  142 (314)
T COG0451          69 IHLAAQSSVPD--SNAS--DPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPY  142 (314)
T ss_pred             EEccccCchhh--hhhh--CHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHH
Confidence            99999764211  1111  3456899999999999999998  234588886665533321           1122  49


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHHhhccCC---C-------CCCCChHHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKALEGKTL---L-------NRLGTTGNMAA  227 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~---~-------~~~~~~~~va~  227 (255)
                      +.+|...+.+++.....  .++.+..+.|+.+..+........   ..+..+.....+   .       ..+...+|+++
T Consensus       143 g~sK~~~E~~~~~~~~~--~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  220 (314)
T COG0451         143 GVSKLAAEQLLRAYARL--YGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVAD  220 (314)
T ss_pred             HHHHHHHHHHHHHHHHH--hCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHH
Confidence            99999999999999983  378999999998877664443111   112222222222   1       12566899999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCc
Q 025259          228 AIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ++..++......    .+++.++.
T Consensus       221 ~~~~~~~~~~~~----~~ni~~~~  240 (314)
T COG0451         221 ALLLALENPDGG----VFNIGSGT  240 (314)
T ss_pred             HHHHHHhCCCCc----EEEeCCCC
Confidence            999998765433    78877764

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.70  E-value=2.5e-15  Score=126.64  Aligned_cols=195  Identities=19%  Similarity=0.168  Sum_probs=136.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|.||++++++|++.|++|+++.|.                     .+|+.+++++.++++..     ++|++
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~---------------------~~d~~~~~~~~~~~~~~-----~~d~v   54 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS---------------------QLDLTDPEALERLLRAI-----RPDAV   54 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc---------------------ccCCCCHHHHHHHHHhC-----CCCEE
Confidence            48999999999999999999999999999884                     47999999988887753     68999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+++... ..    ......+..+++|+.++..+.+++...   +.++|++||...+.+           ..+...|+.
T Consensus        55 i~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~~  126 (287)
T TIGR01214        55 VNTAAYTD-VD----GAESDPEKAFAVNALAPQNLARAAARH---GARLVHISTDYVFDGEGKRPYREDDATNPLNVYGQ  126 (287)
T ss_pred             EECCcccc-cc----ccccCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEeeeeeecCCCCCCCCCCCCCCCcchhhH
Confidence            99999643 11    112234567899999999999998764   237999998654321           123567999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC-------CCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~~~l~s~  235 (255)
                      +|.+.+.+++.+      +.++..+.|+.+..+.....+ ...+........+       ...+...+|+++++..++..
T Consensus       127 ~K~~~E~~~~~~------~~~~~ilR~~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~  199 (287)
T TIGR01214       127 SKLAGEQAIRAA------GPNALIVRTSWLYGGGGGRNF-VRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQR  199 (287)
T ss_pred             HHHHHHHHHHHh------CCCeEEEEeeecccCCCCCCH-HHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhh
Confidence            999999988765      357888889888766421100 1112222221111       12356679999999988854


Q ss_pred             CCCCccccEEeeCCCc
Q 025259          236 DASYITGETLVVAGGM  251 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~  251 (255)
                      ..  ..|+++++-++.
T Consensus       200 ~~--~~~~~~ni~~~~  213 (287)
T TIGR01214       200 LA--RARGVYHLANSG  213 (287)
T ss_pred             cc--CCCCeEEEECCC
Confidence            31  225677776554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.69  E-value=3.5e-15  Score=132.64  Aligned_cols=216  Identities=13%  Similarity=0.002  Sum_probs=144.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.++||||||+|.||++++++|++.|++|++++|...........+.. ..++.++..|+.++.     +       .++
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~-~~~~~~~~~Di~~~~-----~-------~~~  185 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG-NPRFELIRHDVVEPI-----L-------LEV  185 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc-CCceEEEECcccccc-----c-------cCC
Confidence            567899999999999999999999999999999864322211111111 235778888887542     1       269


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC----------------CC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ----------------PP  154 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~----------------~~  154 (255)
                      |+|||+|+... .... ..   +-.+.+++|+.++..+++++...-   .++|++||...+.                +.
T Consensus       186 D~ViHlAa~~~-~~~~-~~---~p~~~~~~Nv~gT~nLleaa~~~g---~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~  257 (436)
T PLN02166        186 DQIYHLACPAS-PVHY-KY---NPVKTIKTNVMGTLNMLGLAKRVG---ARFLLTSTSEVYGDPLEHPQKETYWGNVNPI  257 (436)
T ss_pred             CEEEECceecc-chhh-cc---CHHHHHHHHHHHHHHHHHHHHHhC---CEEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence            99999999653 1111 11   235679999999999999998752   3899999876432                11


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCC---------CCCCCChH
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTL---------LNRLGTTG  223 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~  223 (255)
                      .+...|+.+|.+.+.+++.+....  ++++..+.|+.+..+.......  ...+........+         ...+...+
T Consensus       258 ~p~s~Yg~SK~~aE~~~~~y~~~~--~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~  335 (436)
T PLN02166        258 GERSCYDEGKRTAETLAMDYHRGA--GVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVS  335 (436)
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHh--CCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHH
Confidence            234569999999999999887665  6788888888777653211000  0122222222211         12367789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+++++..++...    .+.++++.+|...
T Consensus       336 Dva~ai~~~~~~~----~~giyNIgs~~~~  361 (436)
T PLN02166        336 DLVDGLVALMEGE----HVGPFNLGNPGEF  361 (436)
T ss_pred             HHHHHHHHHHhcC----CCceEEeCCCCcE
Confidence            9999999887532    2348998777643

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.68  E-value=3e-15  Score=127.24  Aligned_cols=203  Identities=14%  Similarity=0.122  Sum_probs=140.0

Q ss_pred             EEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEE
Q 025259           16 VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVL   95 (255)
Q Consensus        16 lVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~   95 (255)
                      |||||+|.||+++++.|++.|+.|+++.+.                    ..+|+++.++++++++..     ++|++||
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~--------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih   55 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH--------------------KELDLTRQADVEAFFAKE-----KPTYVIL   55 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc--------------------ccCCCCCHHHHHHHHhcc-----CCCEEEE
Confidence            699999999999999999999987765432                    148999999988877752     6899999


Q ss_pred             CCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC---------------CCC-Chh
Q 025259           96 NAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP---------------PSA-MAM  159 (255)
Q Consensus        96 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~---------------~~~-~~~  159 (255)
                      +|+........    .+...+.+++|+.++..+++++...-  -.++|++||...+.+               ..+ ...
T Consensus        56 ~A~~~~~~~~~----~~~~~~~~~~n~~~~~~ll~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~  129 (306)
T PLN02725         56 AAAKVGGIHAN----MTYPADFIRENLQIQTNVIDAAYRHG--VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTNEW  129 (306)
T ss_pred             eeeeecccchh----hhCcHHHHHHHhHHHHHHHHHHHHcC--CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCcch
Confidence            99974311101    11234568899999999999998752  348999999754321               111 234


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHH----hhc----------cCCCCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKA----LEG----------KTLLNRLGT  221 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~----~~~----------~~~~~~~~~  221 (255)
                      |+.+|.+.+.+++.+..+.  ++++..+.|+.+..+.......    .+.+...    ...          ......+..
T Consensus       130 Y~~sK~~~e~~~~~~~~~~--~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~  207 (306)
T PLN02725        130 YAIAKIAGIKMCQAYRIQY--GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH  207 (306)
T ss_pred             HHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence            9999999999998887665  7899999999888774210000    1111111    111          111235788


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+|+++++..++....   .+..+++.+|...+
T Consensus       208 v~Dv~~~~~~~~~~~~---~~~~~ni~~~~~~s  237 (306)
T PLN02725        208 VDDLADAVVFLMRRYS---GAEHVNVGSGDEVT  237 (306)
T ss_pred             HHHHHHHHHHHHhccc---cCcceEeCCCCccc
Confidence            8999999999886532   34567888776543

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.66  E-value=6e-15  Score=126.31  Aligned_cols=204  Identities=12%  Similarity=0.014  Sum_probs=137.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||+|.+|++++++|+++|+.|+++.|+.+..+.    +...  .+.++.+|++|++++..+++       ++|++
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~----l~~~--~v~~v~~Dl~d~~~l~~al~-------g~d~V   68 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASF----LKEW--GAELVYGDLSLPETLPPSFK-------GVTAI   68 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhh----Hhhc--CCEEEECCCCCHHHHHHHHC-------CCCEE
Confidence            69999999999999999999999999999998754322    2222  46788999999998877665       68999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~  173 (255)
                      ||+++...  .        +.....++|+.++..+++++...-  -.++|++||..+.. . +...|..+|...+.+.+ 
T Consensus        69 i~~~~~~~--~--------~~~~~~~~~~~~~~~l~~aa~~~g--vkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~-  133 (317)
T CHL00194         69 IDASTSRP--S--------DLYNAKQIDWDGKLALIEAAKAAK--IKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK-  133 (317)
T ss_pred             EECCCCCC--C--------CccchhhhhHHHHHHHHHHHHHcC--CCEEEEeccccccc-c-CCChHHHHHHHHHHHHH-
Confidence            99876321  1        122356788999999999888653  23899999864432 1 23458888988777653 


Q ss_pred             HHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHH---HHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          174 LAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVR---KALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       174 la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                         +  .++++..+.|+.+...+..... .+...   .+.........+...+|+|+++..++....  ..|+++++.|+
T Consensus       134 ---~--~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~--~~~~~~ni~g~  205 (317)
T CHL00194        134 ---K--SGIPYTIFRLAGFFQGLISQYA-IPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPE--TKNKTFPLVGP  205 (317)
T ss_pred             ---H--cCCCeEEEeecHHhhhhhhhhh-hhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCcc--ccCcEEEecCC
Confidence               2  2688888899855433221110 00000   000000111235667999999998886432  35899999887


Q ss_pred             ccC
Q 025259          251 MAS  253 (255)
Q Consensus       251 ~~~  253 (255)
                      ...
T Consensus       206 ~~~  208 (317)
T CHL00194        206 KSW  208 (317)
T ss_pred             Ccc
Confidence            654

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.66  E-value=8.3e-15  Score=124.43  Aligned_cols=145  Identities=19%  Similarity=0.127  Sum_probs=108.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|.||++++++|++.| +|+.++|...                 .+..|++|.+.+.++++..     ++|++
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-----------------~~~~Dl~d~~~~~~~~~~~-----~~D~V   58 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST-----------------DYCGDFSNPEGVAETVRKI-----RPDVI   58 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-----------------cccCCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999 7888887531                 2457999999998887753     69999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~~y~~  162 (255)
                      ||+|+... ..    ...++-+..+++|+.++..+.+++...-   .++|++||...+.           +..+...|+.
T Consensus        59 ih~Aa~~~-~~----~~~~~~~~~~~~N~~~~~~l~~aa~~~g---~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Yg~  130 (299)
T PRK09987         59 VNAAAHTA-VD----KAESEPEFAQLLNATSVEAIAKAANEVG---AWVVHYSTDYVFPGTGDIPWQETDATAPLNVYGE  130 (299)
T ss_pred             EECCccCC-cc----hhhcCHHHHHHHHHHHHHHHHHHHHHcC---CeEEEEccceEECCCCCCCcCCCCCCCCCCHHHH
Confidence            99999754 11    1122235567899999999999988752   3799999865431           1234467999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccCh
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~  195 (255)
                      +|.+.+.+++.+..      +...+.|+++..+
T Consensus       131 sK~~~E~~~~~~~~------~~~ilR~~~vyGp  157 (299)
T PRK09987        131 TKLAGEKALQEHCA------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHhCC------CEEEEecceecCC
Confidence            99999999875432      3366666666654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.63  E-value=2.7e-14  Score=133.72  Aligned_cols=218  Identities=19%  Similarity=0.092  Sum_probs=142.9

Q ss_pred             EEEEeCCCCchHHHHHHHHH--HcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHH--HHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLG--LEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHR--KNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~--~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~--~~~~~~~~~~~g   88 (255)
                      ++|||||+|.||++++++|+  ..|+.|++++|+... ..........+ .++.++.+|+++++..  ...++.+    .
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~   76 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----G   76 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----c
Confidence            69999999999999999999  579999999996532 22222222222 4688999999985310  1112222    3


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-------------C
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-------------S  155 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-------------~  155 (255)
                      ++|++||+|+.....     .+   ..+..++|+.++..+++++...-  ..++|++||...+...             .
T Consensus        77 ~~D~Vih~Aa~~~~~-----~~---~~~~~~~nv~gt~~ll~~a~~~~--~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~  146 (657)
T PRK07201         77 DIDHVVHLAAIYDLT-----AD---EEAQRAANVDGTRNVVELAERLQ--AATFHHVSSIAVAGDYEGVFREDDFDEGQG  146 (657)
T ss_pred             CCCEEEECceeecCC-----CC---HHHHHHHHhHHHHHHHHHHHhcC--CCeEEEEeccccccCccCccccccchhhcC
Confidence            799999999975311     12   34567899999999999887642  3489999987654211             1


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh----cCCHH---HHHHhhcc---CC-------CCC
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL----LGNDA---VRKALEGK---TL-------LNR  218 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~----~~~~~---~~~~~~~~---~~-------~~~  218 (255)
                      ....|+.+|...+.+++.     ..++++..+.|+.+.++-....    .....   ........   .+       ...
T Consensus       147 ~~~~Y~~sK~~~E~~~~~-----~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (657)
T PRK07201        147 LPTPYHRTKFEAEKLVRE-----ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTN  221 (657)
T ss_pred             CCCchHHHHHHHHHHHHH-----cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeee
Confidence            235699999999998863     1378999999998876421110    00000   11111111   01       112


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+|+++++..++..  ...+|+++++.++...
T Consensus       222 ~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~~  254 (657)
T PRK07201        222 IVPVDYVADALDHLMHK--DGRDGQTFHLTDPKPQ  254 (657)
T ss_pred             eeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCCC
Confidence            45678999999988753  3357899999877554

>PLN02996 fatty acyl-CoA reductase

Probab=99.63  E-value=5.4e-14  Score=126.86  Aligned_cols=225  Identities=14%  Similarity=0.107  Sum_probs=148.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChh---HHHHHHHHHH---------H-c--------CC
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQK---NVDKAVEKLK---------A-L--------GI   61 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~~---------~-~--------~~   61 (255)
                      +..-++||+++||||+|.||++++++|++.+.   +|+++.|...   ..++...++.         + .        ..
T Consensus         5 i~~~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~   84 (491)
T PLN02996          5 CVQFLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISE   84 (491)
T ss_pred             HHHHhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhc
Confidence            33448999999999999999999999998653   4788888643   1222221211         0 0        15


Q ss_pred             eEEEEEecCCC-------HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHh
Q 025259           62 EVIGIICHVSN-------EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP  134 (255)
Q Consensus        62 ~~~~~~~D~~~-------~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~  134 (255)
                      ++.++.+|+++       .+.++.+++       .+|+|||+|+....     +   +..+..+++|+.|+..+++++..
T Consensus        85 kv~~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~-----~---~~~~~~~~~Nv~gt~~ll~~a~~  149 (491)
T PLN02996         85 KVTPVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNF-----D---ERYDVALGINTLGALNVLNFAKK  149 (491)
T ss_pred             CEEEEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCC-----c---CCHHHHHHHHHHHHHHHHHHHHh
Confidence            78999999984       333444443       69999999997541     1   23567899999999999998876


Q ss_pred             cccCCCeEEEEcCcCccCCC---------C--------------------------------------------------
Q 025259          135 HMQKGSSVVFISSIAGYQPP---------S--------------------------------------------------  155 (255)
Q Consensus       135 ~l~~~~~iv~vss~~~~~~~---------~--------------------------------------------------  155 (255)
                      .- .-.++|++||...+...         +                                                  
T Consensus       150 ~~-~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (491)
T PLN02996        150 CV-KVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAK  228 (491)
T ss_pred             cC-CCCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHH
Confidence            42 22379999987654210         0                                                  


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC-------HHHHHHhhccC---------CC
Q 025259          156 ---AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKT---------LL  216 (255)
Q Consensus       156 ---~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~---------~~  216 (255)
                         ....|+.||+..+.+++..+    .++++..+.|+.|.++...+....       ..+........         ..
T Consensus       229 ~~~~pn~Y~~TK~~aE~lv~~~~----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~  304 (491)
T PLN02996        229 LHGWPNTYVFTKAMGEMLLGNFK----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSV  304 (491)
T ss_pred             hCCCCCchHhhHHHHHHHHHHhc----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCee
Confidence               12349999999999997543    379999999998877654332110       11111111111         12


Q ss_pred             CCCCChHHHHHHHHHhcCCCC-CCccccEEeeCCC
Q 025259          217 NRLGTTGNMAAAIAFLASDDA-SYITGETLVVAGG  250 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~-~~~~G~~i~~dgG  250 (255)
                      ..+...++++++++..+.... ..-.++++++.+|
T Consensus       305 ~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        305 LDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             cceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            446777999999887765421 1124789999988

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.62  E-value=1.2e-14  Score=120.18  Aligned_cols=156  Identities=21%  Similarity=0.258  Sum_probs=125.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++||||||+|.||.+.+.+|++.|+.|+++|.-.....+..+.+++.   +..+.++..|++|.+.++++|+..     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            689999999999999999999999999999987654444444444432   468999999999999999988875     


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCC-C
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPS-A  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~-~  156 (255)
                      ++|.|+|-|+... .+    .+.+...+.++.|+.|++.+++....+-  -..+|+.||...+-           +.. +
T Consensus        77 ~fd~V~Hfa~~~~-vg----eS~~~p~~Y~~nNi~gtlnlLe~~~~~~--~~~~V~sssatvYG~p~~ip~te~~~t~~p  149 (343)
T KOG1371|consen   77 KFDAVMHFAALAA-VG----ESMENPLSYYHNNIAGTLNLLEVMKAHN--VKALVFSSSATVYGLPTKVPITEEDPTDQP  149 (343)
T ss_pred             CCceEEeehhhhc-cc----hhhhCchhheehhhhhHHHHHHHHHHcC--CceEEEecceeeecCcceeeccCcCCCCCC
Confidence            6999999999764 22    2344457889999999999999999875  34789988876541           223 6


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~  179 (255)
                      ...|+.+|-+++...+.+...+.
T Consensus       150 ~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  150 TNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCcchhhhHHHHHHHHhhhcccc
Confidence            67899999999999999887764

>PRK05865 hypothetical protein; Provisional

Probab=99.55  E-value=2.6e-13  Score=127.87  Aligned_cols=180  Identities=15%  Similarity=0.075  Sum_probs=130.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||+|+||++++++|+++|++|++++|+.+..         ...++.++.+|+++.+++.++++       .+|++
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~---------~~~~v~~v~gDL~D~~~l~~al~-------~vD~V   65 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDS---------WPSSADFIAADIRDATAVESAMT-------GADVV   65 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhh---------cccCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            699999999999999999999999999999975321         11246788999999999887776       58999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~  173 (255)
                      ||+|+...   +           .+++|+.++..+++++...  ..+++|++||..              |.+.+.+++ 
T Consensus        66 VHlAa~~~---~-----------~~~vNv~GT~nLLeAa~~~--gvkr~V~iSS~~--------------K~aaE~ll~-  114 (854)
T PRK05865         66 AHCAWVRG---R-----------NDHINIDGTANVLKAMAET--GTGRIVFTSSGH--------------QPRVEQMLA-  114 (854)
T ss_pred             EECCCccc---c-----------hHHHHHHHHHHHHHHHHHc--CCCeEEEECCcH--------------HHHHHHHHH-
Confidence            99998532   1           3688999999998887754  235899999863              877777663 


Q ss_pred             HHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc--CCC------CCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          174 LAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK--TLL------NRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       174 la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                         ++  ++++..+.|+.+..+-...      +.......  .+.      ..+...+|+++++..++...  ...|.++
T Consensus       115 ---~~--gl~~vILRp~~VYGP~~~~------~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~ggvy  181 (854)
T PRK05865        115 ---DC--GLEWVAVRCALIFGRNVDN------WVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VIDSGPV  181 (854)
T ss_pred             ---Hc--CCCEEEEEeceEeCCChHH------HHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcCCCeE
Confidence               22  7889999999888763111      11111111  111      13677899999998887432  1235688


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      ++.+|...
T Consensus       182 NIgsg~~~  189 (854)
T PRK05865        182 NLAAPGEL  189 (854)
T ss_pred             EEECCCcc
Confidence            88877654

>PLN02778 3,5-epimerase/4-reductase

Probab=99.54  E-value=1.4e-12  Score=110.64  Aligned_cols=193  Identities=13%  Similarity=0.047  Sum_probs=120.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .+++|||||+|.||++++++|+++|++|+...                        .|+.+.+.+...++..     ++|
T Consensus         9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~------------------------~~~~~~~~v~~~l~~~-----~~D   59 (298)
T PLN02778          9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS------------------------GRLENRASLEADIDAV-----KPT   59 (298)
T ss_pred             CCeEEEECCCCHHHHHHHHHHHhCCCEEEEec------------------------CccCCHHHHHHHHHhc-----CCC
Confidence            46899999999999999999999999986431                        2345555555555432     699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc------------------CC
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY------------------QP  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~------------------~~  153 (255)
                      ++||+||......  .+...++-.+.+++|+.++..+++++...-.   +.+++||...+                  .+
T Consensus        60 ~ViH~Aa~~~~~~--~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv---~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p  134 (298)
T PLN02778         60 HVFNAAGVTGRPN--VDWCESHKVETIRANVVGTLTLADVCRERGL---VLTNYATGCIFEYDDAHPLGSGIGFKEEDTP  134 (298)
T ss_pred             EEEECCcccCCCC--chhhhhCHHHHHHHHHHHHHHHHHHHHHhCC---CEEEEecceEeCCCCCCCcccCCCCCcCCCC
Confidence            9999999754111  1112234567899999999999999987522   34555543211                  01


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEE-EeCCcccChhhhhhcCCHHHHHHhhccCC---C-CCCCChHHHHHH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNC-VAPGFVPTHFAQALLGNDAVRKALEGKTL---L-NRLGTTGNMAAA  228 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~-v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~va~~  228 (255)
                      .++...|+.+|.+.+.+++.++..+  ++|+.. ..++...         ...+........+   . ..+...+|++++
T Consensus       135 ~~~~s~Yg~sK~~~E~~~~~y~~~~--~lr~~~~~~~~~~~---------~~~fi~~~~~~~~~~~~~~s~~yv~D~v~a  203 (298)
T PLN02778        135 NFTGSFYSKTKAMVEELLKNYENVC--TLRVRMPISSDLSN---------PRNFITKITRYEKVVNIPNSMTILDELLPI  203 (298)
T ss_pred             CCCCCchHHHHHHHHHHHHHhhccE--EeeecccCCccccc---------HHHHHHHHHcCCCeeEcCCCCEEHHHHHHH
Confidence            1223579999999999998865332  455422 1111100         0111222222111   1 236678899998


Q ss_pred             HHHhcCCCCCCccccEEeeCCCccC
Q 025259          229 IAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.++...   .+ .++++.+|...
T Consensus       204 l~~~l~~~---~~-g~yNigs~~~i  224 (298)
T PLN02778        204 SIEMAKRN---LT-GIYNFTNPGVV  224 (298)
T ss_pred             HHHHHhCC---CC-CeEEeCCCCcc
Confidence            88887532   23 48998766543

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.52  E-value=9.1e-13  Score=103.72  Aligned_cols=173  Identities=18%  Similarity=0.181  Sum_probs=122.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      |+|+||+|.+|+.++++|++.|++|+++.|++++.+.        ..++.++.+|+.|++++.++++       +.|.+|
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi   65 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--------SPGVEIIQGDLFDPDSVKAALK-------GADAVI   65 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--------CTTEEEEESCTTCHHHHHHHHT-------TSSEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--------ccccccceeeehhhhhhhhhhh-------hcchhh
Confidence            7999999999999999999999999999999987665        4578999999999988887766       799999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCC---------hhhHHhHH
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAM---------AMYGVTKT  165 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~---------~~y~~sKa  165 (255)
                      +++|...  .       +         ....-.+++++...  +..++|++|+...+...+..         ..|...|.
T Consensus        66 ~~~~~~~--~-------~---------~~~~~~~~~a~~~~--~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~  125 (183)
T PF13460_consen   66 HAAGPPP--K-------D---------VDAAKNIIEAAKKA--GVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKR  125 (183)
T ss_dssp             ECCHSTT--T-------H---------HHHHHHHHHHHHHT--TSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHH
T ss_pred             hhhhhhc--c-------c---------cccccccccccccc--ccccceeeeccccCCCCCcccccccccchhhhHHHHH
Confidence            9998643  1       1         33444555555543  33489999988876644332         24666666


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ..+.+.+    +  .+++...+.|+++..+..........      .........+.+|+|++++.++.
T Consensus       126 ~~e~~~~----~--~~~~~~ivrp~~~~~~~~~~~~~~~~------~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  126 EAEEALR----E--SGLNWTIVRPGWIYGNPSRSYRLIKE------GGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHH----H--STSEEEEEEESEEEBTTSSSEEEESS------TSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHH----h--cCCCEEEEECcEeEeCCCcceeEEec------cCCCCcCcCCHHHHHHHHHHHhC
Confidence            5554442    2  28999999999887764221100000      11122357788999999988763

...

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.51  E-value=7.7e-13  Score=112.91  Aligned_cols=224  Identities=17%  Similarity=0.143  Sum_probs=151.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +..+++||||+|.+|++++++|.+.+  ..|.++|..+....-..+.......++.++.+|+.+..++...++       
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~-------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ-------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhcc-------
Confidence            47899999999999999999999988  679999987642111111111135688999999999999888777       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------CCCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------PPSA  156 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------~~~~  156 (255)
                      +. .+||+|.... +.    ....+-+..+++|+.|+..+++.+...-.+  ++|++||.....            +.|.
T Consensus        76 ~~-~Vvh~aa~~~-~~----~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~--~lIYtSs~~Vvf~g~~~~n~~E~~p~p~  147 (361)
T KOG1430|consen   76 GA-VVVHCAASPV-PD----FVENDRDLAMRVNVNGTLNVIEACKELGVK--RLIYTSSAYVVFGGEPIINGDESLPYPL  147 (361)
T ss_pred             Cc-eEEEeccccC-cc----ccccchhhheeecchhHHHHHHHHHHhCCC--EEEEecCceEEeCCeecccCCCCCCCcc
Confidence            56 7777776532 22    122256778999999999999999987433  899999887542            2232


Q ss_pred             --ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC---------CCCCChHHH
Q 025259          157 --MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL---------NRLGTTGNM  225 (255)
Q Consensus       157 --~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~v  225 (255)
                        ...|+.||+-.|.+++....  .......++.|..+.+|-.....  +...+........         ..+...+-|
T Consensus       148 ~~~d~Y~~sKa~aE~~Vl~an~--~~~l~T~aLR~~~IYGpgd~~~~--~~i~~~~~~g~~~f~~g~~~~~~~~~~~~Nv  223 (361)
T KOG1430|consen  148 KHIDPYGESKALAEKLVLEANG--SDDLYTCALRPPGIYGPGDKRLL--PKIVEALKNGGFLFKIGDGENLNDFTYGENV  223 (361)
T ss_pred             ccccccchHHHHHHHHHHHhcC--CCCeeEEEEccccccCCCCcccc--HHHHHHHHccCceEEeeccccccceEEechh
Confidence              35899999999999987664  22688999999888877533221  1122222221111         122233333


Q ss_pred             HH--HHH--HhcCCCCCCccccEEeeCCCccCC
Q 025259          226 AA--AIA--FLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       226 a~--~~~--~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.  .+.  .|. ......+||.+.+..|.+.+
T Consensus       224 a~ahilA~~aL~-~~~~~~~Gq~yfI~d~~p~~  255 (361)
T KOG1430|consen  224 AWAHILAARALL-DKSPSVNGQFYFITDDTPVR  255 (361)
T ss_pred             HHHHHHHHHHHH-hcCCccCceEEEEeCCCcch
Confidence            32  222  232 26777999999999887643

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.50  E-value=1.6e-12  Score=107.28  Aligned_cols=180  Identities=20%  Similarity=0.264  Sum_probs=130.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      +||||++|-+|.++++.|. .++.|+.++|.+                     +|++|++.+.+++++.     ++|+||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~---------------------~Ditd~~~v~~~i~~~-----~PDvVI   55 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE---------------------LDITDPDAVLEVIRET-----RPDVVI   55 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc---------------------ccccChHHHHHHHHhh-----CCCEEE
Confidence            8999999999999999998 778899988855                     8999999999999986     799999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHHh
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~s  163 (255)
                      |+|++..     .+..+.+-+..+.+|..++.++.+++...   +..+|++|+-..+.+           ..+...|+.|
T Consensus        56 n~AAyt~-----vD~aE~~~e~A~~vNa~~~~~lA~aa~~~---ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~s  127 (281)
T COG1091          56 NAAAYTA-----VDKAESEPELAFAVNATGAENLARAAAEV---GARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRS  127 (281)
T ss_pred             ECccccc-----cccccCCHHHHHHhHHHHHHHHHHHHHHh---CCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHH
Confidence            9999865     22333446778999999999999999976   447999997765433           2456789999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc-------CCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK-------TLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |.+.|..++...    +  +...|..+|+......++.  ....+.....       .-.+.....+|+|+++..++...
T Consensus       128 Kl~GE~~v~~~~----~--~~~I~Rtswv~g~~g~nFv--~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~  199 (281)
T COG1091         128 KLAGEEAVRAAG----P--RHLILRTSWVYGEYGNNFV--KTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKE  199 (281)
T ss_pred             HHHHHHHHHHhC----C--CEEEEEeeeeecCCCCCHH--HHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhcc
Confidence            999999887554    3  3334444445443321110  0111111111       12244677799999999988665


Q ss_pred             C
Q 025259          237 A  237 (255)
Q Consensus       237 ~  237 (255)
                      .
T Consensus       200 ~  200 (281)
T COG1091         200 K  200 (281)
T ss_pred             c
Confidence            3

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.50  E-value=5.4e-13  Score=110.38  Aligned_cols=159  Identities=20%  Similarity=0.192  Sum_probs=101.6

Q ss_pred             EeCCCCchHHHHHHHHHHcCC--eEEEEeCChhH---HHHHHHHHHH----------cCCeEEEEEecCCCHH------H
Q 025259           17 VTASTQGIGLGVAERLGLEGA--SVVISSRKQKN---VDKAVEKLKA----------LGIEVIGIICHVSNEQ------H   75 (255)
Q Consensus        17 VtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~---~~~~~~~~~~----------~~~~~~~~~~D~~~~~------~   75 (255)
                      ||||+|.+|.++.++|++.+.  +|+++.|....   .+++.+.+.+          ...+++++.+|++++.      .
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999986  89999997633   3333333221          2568999999999854      3


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC--C
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--P  153 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~--~  153 (255)
                      .+.+.+       .+|++||||+...+..        .+++..++|+.|+..+++.+...-.+  +++++||.....  .
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~--------~~~~~~~~NV~gt~~ll~la~~~~~~--~~~~iSTa~v~~~~~  143 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA--------PYSELRAVNVDGTRNLLRLAAQGKRK--RFHYISTAYVAGSRP  143 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS---------S--EEHHHHHHHHHHHHHHHTSSS-----EEEEEEGGGTTS-T
T ss_pred             hhcccc-------ccceeeecchhhhhcc--------cchhhhhhHHHHHHHHHHHHHhccCc--ceEEeccccccCCCC
Confidence            333333       5999999999765332        34456889999999999999854323  899999932211  1


Q ss_pred             ------------------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccC
Q 025259          154 ------------------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (255)
Q Consensus       154 ------------------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t  194 (255)
                                        ......|..||...|.+++..+.+.  ++++..+.||.+-+
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~--g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  144 GTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRH--GLPVTIYRPGIIVG  200 (249)
T ss_dssp             TT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH-----EEEEEE-EEE-
T ss_pred             CcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcC--CceEEEEecCcccc
Confidence                              1223579999999999999998875  78899999997765

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.48  E-value=4.5e-13  Score=113.06  Aligned_cols=196  Identities=16%  Similarity=0.175  Sum_probs=125.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++||||++|-||.++.+.|.+.|+.|+.++|.                     .+|++|.+++.+++++.     ++|++
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~---------------------~~dl~d~~~~~~~~~~~-----~pd~V   55 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS---------------------DLDLTDPEAVAKLLEAF-----KPDVV   55 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT---------------------CS-TTSHHHHHHHHHHH-------SEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch---------------------hcCCCCHHHHHHHHHHh-----CCCeE
Confidence            68999999999999999999999999999886                     58999999999998876     69999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~~y~~  162 (255)
                      ||+|+... .    +.-+++-+..+.+|+.++..+.+.+...   +.++|++||...+.+.           .+...|+-
T Consensus        56 in~aa~~~-~----~~ce~~p~~a~~iN~~~~~~la~~~~~~---~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~  127 (286)
T PF04321_consen   56 INCAAYTN-V----DACEKNPEEAYAINVDATKNLAEACKER---GARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGR  127 (286)
T ss_dssp             EE-------H----HHHHHSHHHHHHHHTHHHHHHHHHHHHC---T-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHH
T ss_pred             eccceeec-H----HhhhhChhhhHHHhhHHHHHHHHHHHHc---CCcEEEeeccEEEcCCcccccccCCCCCCCCHHHH
Confidence            99999753 1    1123345678999999999999999864   4589999998655332           34578999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC-------CCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~~~l~s~  235 (255)
                      +|...|..++.    ..+  +...+.++++..+-...+  ...+........+       .......+|+|+.+..++..
T Consensus       128 ~K~~~E~~v~~----~~~--~~~IlR~~~~~g~~~~~~--~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~  199 (286)
T PF04321_consen  128 SKLEGEQAVRA----ACP--NALILRTSWVYGPSGRNF--LRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEK  199 (286)
T ss_dssp             HHHHHHHHHHH----H-S--SEEEEEE-SEESSSSSSH--HHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHH----hcC--CEEEEecceecccCCCch--hhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHh
Confidence            99999988876    222  556666666655511111  1222233322221       12345678999999998865


Q ss_pred             CC-CCccccEEeeCCCc
Q 025259          236 DA-SYITGETLVVAGGM  251 (255)
Q Consensus       236 ~~-~~~~G~~i~~dgG~  251 (255)
                      .. ..-...++++.|.-
T Consensus       200 ~~~~~~~~Giyh~~~~~  216 (286)
T PF04321_consen  200 NLSGASPWGIYHLSGPE  216 (286)
T ss_dssp             HHH-GGG-EEEE---BS
T ss_pred             cccccccceeEEEecCc
Confidence            32 11234566666543

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.46  E-value=3.4e-11  Score=100.36  Aligned_cols=181  Identities=13%  Similarity=0.161  Sum_probs=146.9

Q ss_pred             CCEEEEeCC-CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC--
Q 025259           12 GKVAVVTAS-TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG--   88 (255)
Q Consensus        12 ~k~vlVtG~-~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   88 (255)
                      .+.|+|.|. +.-+++.+|..|-++|+-|+++..+.++.+....+-   ..++.....|..++.++...+.++.+.+.  
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~~~ve~e~---~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p   79 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDEKYVESED---RPDIRPLWLDDSDPSSIHASLSRFASLLSRP   79 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHHHHHHhcc---CCCCCCcccCCCCCcchHHHHHHHHHHhcCC
Confidence            467899994 799999999999999999999999887654443322   34577778888888888888887777654  


Q ss_pred             ------------CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEc-CcCcc
Q 025259           89 ------------RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFIS-SIAGY  151 (255)
Q Consensus        89 ------------~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vs-s~~~~  151 (255)
                                  .+..+|.........+|++..+.+.|.+.++.|+..++.++|.++|+++.    ..+||.+. |..+-
T Consensus        80 ~~p~~~~~~h~l~L~svi~~Psl~yp~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ss  159 (299)
T PF08643_consen   80 HVPFPGAPPHHLQLKSVIFIPSLSYPTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSS  159 (299)
T ss_pred             CCCCCCCCCceeEEEEEEEecCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhc
Confidence                        34556666655545789999999999999999999999999999999964    45666665 55566


Q ss_pred             CCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccCh
Q 025259          152 QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       152 ~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~  195 (255)
                      ...|..+.-....+++.+|.++|++|+.+ +|.|..+..|.++-.
T Consensus       160 l~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  160 LNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             cCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            67778888999999999999999999998 999999998877644

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.46  E-value=2.7e-11  Score=122.30  Aligned_cols=220  Identities=17%  Similarity=0.163  Sum_probs=144.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC----CeEEEEeCChhHH---HHHHHHHHHc-------CCeEEEEEecCCCH----
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG----ASVVISSRKQKNV---DKAVEKLKAL-------GIEVIGIICHVSNE----   73 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G----~~Vv~~~r~~~~~---~~~~~~~~~~-------~~~~~~~~~D~~~~----   73 (255)
                      .++|+|||++|.+|.+++++|++.+    ..|+...|+....   ++..+.....       ..++.++.+|++++    
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5799999999999999999999887    6788888875432   2222222221       13688999999854    


Q ss_pred             --HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc
Q 025259           74 --QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY  151 (255)
Q Consensus        74 --~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~  151 (255)
                        +....+.       ..+|++||||+....     ..+   +......|+.|+..+++.+...  +..+++++||...+
T Consensus      1051 ~~~~~~~l~-------~~~d~iiH~Aa~~~~-----~~~---~~~~~~~nv~gt~~ll~~a~~~--~~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1051 SDEKWSDLT-------NEVDVIIHNGALVHW-----VYP---YSKLRDANVIGTINVLNLCAEG--KAKQFSFVSSTSAL 1113 (1389)
T ss_pred             CHHHHHHHH-------hcCCEEEECCcEecC-----ccC---HHHHHHhHHHHHHHHHHHHHhC--CCceEEEEeCeeec
Confidence              3333222       269999999997531     112   3344568999999999988754  23489999997543


Q ss_pred             CC----------------------------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC
Q 025259          152 QP----------------------------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN  203 (255)
Q Consensus       152 ~~----------------------------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~  203 (255)
                      ..                            ......|+.||.+.+.+++.....   ++++..+.||.+..+........
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~---g~~~~i~Rpg~v~G~~~~g~~~~ 1190 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKR---GLRGCIVRPGYVTGDSKTGATNT 1190 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhC---CCCEEEECCCccccCCCcCCCCc
Confidence            11                            011245999999999999876542   89999999999976532221111


Q ss_pred             HHH-HHHhh-----ccCC----CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          204 DAV-RKALE-----GKTL----LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       204 ~~~-~~~~~-----~~~~----~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      .++ .....     ...|    ...+...++++++++.++........+.++++.++.
T Consensus      1191 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~ 1248 (1389)
T TIGR03443      1191 DDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHP 1248 (1389)
T ss_pred             hhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCC
Confidence            111 11111     1112    134667899999999887544322345677776654

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.44  E-value=7.4e-12  Score=105.53  Aligned_cols=210  Identities=15%  Similarity=0.084  Sum_probs=122.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      +|||||+|.||.+++++|++.|++|++++|+.+..+....        ..  ..|+.. ..       ..+.+.++|+||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~--~~~~~~-~~-------~~~~~~~~D~Vv   62 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKW--------EG--YKPWAP-LA-------ESEALEGADAVI   62 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccc--------ee--eecccc-cc-------hhhhcCCCCEEE
Confidence            6899999999999999999999999999998765322110        00  112222 11       122335799999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHHh
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGVT  163 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~s  163 (255)
                      |+|+.....   .+...+..+..+++|+.++..+.+++...-.+...+|+.|+...+..           ..+...|+..
T Consensus        63 h~a~~~~~~---~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~  139 (292)
T TIGR01777        63 NLAGEPIAD---KRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAEL  139 (292)
T ss_pred             ECCCCCccc---ccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHH
Confidence            999964311   22344556778899999999999999865322224444544322210           1111223333


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HHHHHH-----hhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DAVRKA-----LEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +...+...+.    ... ++++..+.|+.+..+-. ..... ......     .........+...+|+++++..++...
T Consensus       140 ~~~~e~~~~~----~~~~~~~~~ilR~~~v~G~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~  214 (292)
T TIGR01777       140 CRDWEEAAQA----AEDLGTRVVLLRTGIVLGPKG-GALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENA  214 (292)
T ss_pred             HHHHHHHhhh----chhcCCceEEEeeeeEECCCc-chhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCc
Confidence            3333333332    223 78999999999877621 11000 000000     001112235678899999999998653


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      .  .. .++++-++...
T Consensus       215 ~--~~-g~~~~~~~~~~  228 (292)
T TIGR01777       215 S--IS-GPVNATAPEPV  228 (292)
T ss_pred             c--cC-CceEecCCCcc
Confidence            2  23 36777665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.39  E-value=8.9e-12  Score=111.75  Aligned_cols=161  Identities=17%  Similarity=0.210  Sum_probs=121.1

Q ss_pred             CCEEE----EeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAV----VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vl----VtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +..+|    |+||++|+|.++++.|...|+.|+.+.+.....                                 .....
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~---------------------------------~~~~~   80 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW---------------------------------AAGWG   80 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc---------------------------------ccCcC
Confidence            45566    888899999999999999999999876654310                                 00001


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      .+++.+++.+....        +.+++        .+.+.+.+..++.|.+.++||+++|..+..   +...|+++|+++
T Consensus        81 ~~~~~~~~d~~~~~--------~~~~l--------~~~~~~~~~~l~~l~~~griv~i~s~~~~~---~~~~~~~akaal  141 (450)
T PRK08261         81 DRFGALVFDATGIT--------DPADL--------KALYEFFHPVLRSLAPCGRVVVLGRPPEAA---ADPAAAAAQRAL  141 (450)
T ss_pred             CcccEEEEECCCCC--------CHHHH--------HHHHHHHHHHHHhccCCCEEEEEccccccC---CchHHHHHHHHH
Confidence            24555554443221        12322        244577888888888889999999987653   345699999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .++++++++|+..+++++.|.|++                            ..++++++.+.|+++....+++|+++.+
T Consensus       142 ~gl~rsla~E~~~gi~v~~i~~~~----------------------------~~~~~~~~~~~~l~s~~~a~~~g~~i~~  193 (450)
T PRK08261        142 EGFTRSLGKELRRGATAQLVYVAP----------------------------GAEAGLESTLRFFLSPRSAYVSGQVVRV  193 (450)
T ss_pred             HHHHHHHHHHhhcCCEEEEEecCC----------------------------CCHHHHHHHHHHhcCCccCCccCcEEEe
Confidence            999999999994399999998875                            3567889999999999999999999999


Q ss_pred             CCCcc
Q 025259          248 AGGMA  252 (255)
Q Consensus       248 dgG~~  252 (255)
                      +++..
T Consensus       194 ~~~~~  198 (450)
T PRK08261        194 GAADA  198 (450)
T ss_pred             cCCcc
Confidence            98753

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.38  E-value=1.1e-11  Score=100.62  Aligned_cols=227  Identities=13%  Similarity=0.003  Sum_probs=154.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCC-h-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRK-Q-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~-~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ..+.+.++||||.|.||...+..++..  -++.+.++.- - ..++ ..+++ ....+..++..|+.++..+..++..  
T Consensus         3 ~~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~-~l~~~-~n~p~ykfv~~di~~~~~~~~~~~~--   78 (331)
T KOG0747|consen    3 TYKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLK-NLEPV-RNSPNYKFVEGDIADADLVLYLFET--   78 (331)
T ss_pred             CCccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccc-hhhhh-ccCCCceEeeccccchHHHHhhhcc--
Confidence            345699999999999999999999987  3444433321 1 1111 11111 2246889999999998887777664  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------  152 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------  152 (255)
                         .++|.|+|-|......     .+.-+--+....|+.++..++++.+... +..++|++|+...+.            
T Consensus        79 ---~~id~vihfaa~t~vd-----~s~~~~~~~~~nnil~t~~Lle~~~~sg-~i~~fvhvSTdeVYGds~~~~~~~E~s  149 (331)
T KOG0747|consen   79 ---EEIDTVIHFAAQTHVD-----RSFGDSFEFTKNNILSTHVLLEAVRVSG-NIRRFVHVSTDEVYGDSDEDAVVGEAS  149 (331)
T ss_pred             ---CchhhhhhhHhhhhhh-----hhcCchHHHhcCCchhhhhHHHHHHhcc-CeeEEEEecccceecCccccccccccc
Confidence               4899999999875422     2222234457899999999999999765 234899999876542            


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhh--ccCCC-------CCCCChH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALE--GKTLL-------NRLGTTG  223 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~  223 (255)
                      ...+...|+++|+|.+++++++...+  ++.+..+.-+.|.+|-..+....+-+.....  ...+.       ....-.+
T Consensus       150 ~~nPtnpyAasKaAaE~~v~Sy~~sy--~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~ve  227 (331)
T KOG0747|consen  150 LLNPTNPYAASKAAAEMLVRSYGRSY--GLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVE  227 (331)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHhhcc--CCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHH
Confidence            12345679999999999999999998  7888888888888775433322222222111  11222       2355679


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+++++-..+..   .-.|+++++.--+++
T Consensus       228 D~~ea~~~v~~K---g~~geIYNIgtd~e~  254 (331)
T KOG0747|consen  228 DVSEAFKAVLEK---GELGEIYNIGTDDEM  254 (331)
T ss_pred             HHHHHHHHHHhc---CCccceeeccCcchh
Confidence            999988887755   236899998655443

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.35  E-value=1.1e-10  Score=109.54  Aligned_cols=142  Identities=13%  Similarity=-0.011  Sum_probs=101.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ..++|||||+|.||+++++.|.+.|+.|..                        ...|++|.+++...+++.     ++|
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~------------------------~~~~l~d~~~v~~~i~~~-----~pd  430 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY------------------------GKGRLEDRSSLLADIRNV-----KPT  430 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe------------------------eccccccHHHHHHHHHhh-----CCC
Confidence            447999999999999999999999988731                        124678888887777654     799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------C-------
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------P-------  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~-------  153 (255)
                      +|||+|+....  +..+...++-.+.+++|+.++..+++++...-   .+++++||...+.           +       
T Consensus       431 ~Vih~Aa~~~~--~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g---~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~  505 (668)
T PLN02260        431 HVFNAAGVTGR--PNVDWCESHKVETIRANVVGTLTLADVCRENG---LLMMNFATGCIFEYDAKHPEGSGIGFKEEDKP  505 (668)
T ss_pred             EEEECCcccCC--CCCChHHhCHHHHHHHHhHHHHHHHHHHHHcC---CeEEEEcccceecCCcccccccCCCCCcCCCC
Confidence            99999997531  11223344557889999999999999998752   2456665543211           1       


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP  189 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~p  189 (255)
                      .+....|+.+|.+.+.+++.+...+  .+|+..+..
T Consensus       506 ~~~~~~Yg~sK~~~E~~~~~~~~~~--~~r~~~~~~  539 (668)
T PLN02260        506 NFTGSFYSKTKAMVEELLREYDNVC--TLRVRMPIS  539 (668)
T ss_pred             CCCCChhhHHHHHHHHHHHhhhhhe--EEEEEEecc
Confidence            1223679999999999998764221  566666653

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.35  E-value=1.3e-11  Score=100.31  Aligned_cols=216  Identities=15%  Similarity=0.065  Sum_probs=153.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+|++||||-+|--|.=+++.|+++|+.|..+.|..+......-.+.+    .+.+++++.+|++|...+.++++.+   
T Consensus         1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v---   77 (345)
T COG1089           1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV---   77 (345)
T ss_pred             CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc---
Confidence            368999999999999999999999999999998874433221112322    3457999999999999999999987   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----------CCCC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------QPPS  155 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----------~~~~  155 (255)
                        .+|-+.|.++.+.     ...+.+.-+...+++..|+..++.+.+-+-.+..++.-.||+.-+           .|+.
T Consensus        78 --~PdEIYNLaAQS~-----V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFy  150 (345)
T COG1089          78 --QPDEIYNLAAQSH-----VGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFY  150 (345)
T ss_pred             --Cchhheecccccc-----ccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCC
Confidence              7999999988643     344556666778999999999999998765445677766665422           3567


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhC---C-CcEEEEEeCCcccChhhhhhcCC-------HHHHHHhhccCCCCCCCChHH
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKTLLNRLGTTGN  224 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~---~-~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      +.++|+++|-....++..++..++   . ||-+|.=+|.==.+=.++.+...       .+-.-.+.+....+.++...|
T Consensus       151 PrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~D  230 (345)
T COG1089         151 PRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKD  230 (345)
T ss_pred             CCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHH
Confidence            889999999999999998888874   3 77788777752222112211000       000001112234456788889


Q ss_pred             HHHHHHHhcCCC
Q 025259          225 MAAAIAFLASDD  236 (255)
Q Consensus       225 va~~~~~l~s~~  236 (255)
                      .+++++.++..+
T Consensus       231 YVe~mwlmLQq~  242 (345)
T COG1089         231 YVEAMWLMLQQE  242 (345)
T ss_pred             HHHHHHHHHccC
Confidence            999888888654

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.33  E-value=1.2e-10  Score=98.85  Aligned_cols=164  Identities=19%  Similarity=0.195  Sum_probs=123.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChh---HHHHHHHHHH-------HcCCeEEEEEecCCC------HHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQK---NVDKAVEKLK-------ALGIEVIGIICHVSN------EQH   75 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~---~~~~~~~~~~-------~~~~~~~~~~~D~~~------~~~   75 (255)
                      +++++|||+|.+|..+.+.|+.. .++|++.-|.++   ..+++.+.+.       ....++.++.+|++.      +..
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999999876 468998888654   3445555554       235789999999983      445


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC--
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP--  153 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~--  153 (255)
                      ...+.+       .+|.+|||++...+..        .+.+....|+.|+..+++.+.-.  +...+.+|||++....  
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~--------pYs~L~~~NVlGT~evlrLa~~g--k~Kp~~yVSsisv~~~~~  143 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF--------PYSELRGANVLGTAEVLRLAATG--KPKPLHYVSSISVGETEY  143 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC--------cHHHhcCcchHhHHHHHHHHhcC--CCceeEEEeeeeeccccc
Confidence            555544       5999999999764222        25667889999999999887743  2335999998875421  


Q ss_pred             ------------------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          154 ------------------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       154 ------------------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                                        ......|+-||.+.|.+++.....   |+++..+.||.+-.+-
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r---GLpv~I~Rpg~I~gds  201 (382)
T COG3320         144 YSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR---GLPVTIFRPGYITGDS  201 (382)
T ss_pred             cCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc---CCCeEEEecCeeeccC
Confidence                              123467999999999999877766   8999999999886543

>PRK12320 hypothetical protein; Provisional

Probab=99.32  E-value=1.6e-10  Score=107.15  Aligned_cols=188  Identities=15%  Similarity=0.127  Sum_probs=121.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|.||++++++|++.|+.|++++|.....         ....+.++.+|++++. +.++++       ++|++
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~---------~~~~ve~v~~Dl~d~~-l~~al~-------~~D~V   64 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA---------LDPRVDYVCASLRNPV-LQELAG-------EADAV   64 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc---------ccCCceEEEccCCCHH-HHHHhc-------CCCEE
Confidence            599999999999999999999999999999865321         1235778999999873 333332       68999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKA  173 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~  173 (255)
                      ||+|+... ..            ...+|+.++.++++++...-   .++|++||..+.   +  ..|.    ..+.+++ 
T Consensus        65 IHLAa~~~-~~------------~~~vNv~Gt~nLleAA~~~G---vRiV~~SS~~G~---~--~~~~----~aE~ll~-  118 (699)
T PRK12320         65 IHLAPVDT-SA------------PGGVGITGLAHVANAAARAG---ARLLFVSQAAGR---P--ELYR----QAETLVS-  118 (699)
T ss_pred             EEcCccCc-cc------------hhhHHHHHHHHHHHHHHHcC---CeEEEEECCCCC---C--cccc----HHHHHHH-
Confidence            99998632 10            12479999999999887642   379999876421   1  1232    1233322 


Q ss_pred             HHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          174 LAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       174 la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                         +.  ++++..+.|+.+..+........  ..+........+. ..+..+|++++++.+++..   .+| ++++.||.
T Consensus       119 ---~~--~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI-~vIyVdDvv~alv~al~~~---~~G-iyNIG~~~  188 (699)
T PRK12320        119 ---TG--WAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI-RVLHLDDLVRFLVLALNTD---RNG-VVDLATPD  188 (699)
T ss_pred             ---hc--CCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce-EEEEHHHHHHHHHHHHhCC---CCC-EEEEeCCC
Confidence               22  46778888888777632111000  1111111111111 2358899999998888542   235 99999887


Q ss_pred             cCC
Q 025259          252 ASR  254 (255)
Q Consensus       252 ~~~  254 (255)
                      ..+
T Consensus       189 ~~S  191 (699)
T PRK12320        189 TTN  191 (699)
T ss_pred             eeE
Confidence            653

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.32  E-value=1.7e-10  Score=105.69  Aligned_cols=222  Identities=14%  Similarity=0.132  Sum_probs=139.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChh---HHHHHHHHH---------HH-c--------CCeEE
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQK---NVDKAVEKL---------KA-L--------GIEVI   64 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~---~~~~~~~~~---------~~-~--------~~~~~   64 (255)
                      -+++|+|+||||+|.||..++++|++.+.   +|+++.|...   ..++..+++         ++ .        ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            37899999999999999999999998764   4788888543   222332222         11 1        24689


Q ss_pred             EEEecCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC
Q 025259           65 GIICHVSNEQ------HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK  138 (255)
Q Consensus        65 ~~~~D~~~~~------~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~  138 (255)
                      ++.+|++++.      ..+.+.+       .+|++||+|+....     +   +.++..+++|+.++..+++.+...- .
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f-----~---~~~~~a~~vNV~GT~nLLelA~~~~-~  259 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTF-----D---ERYDVAIDINTRGPCHLMSFAKKCK-K  259 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECcccccc-----c---cCHHHHHHHHHHHHHHHHHHHHHcC-C
Confidence            9999999872      3333322       59999999997541     1   3467789999999999999887642 1


Q ss_pred             CCeEEEEcCcCccC---------CCC------------------------------------------------------
Q 025259          139 GSSVVFISSIAGYQ---------PPS------------------------------------------------------  155 (255)
Q Consensus       139 ~~~iv~vss~~~~~---------~~~------------------------------------------------------  155 (255)
                      -.++|++||...+.         .++                                                      
T Consensus       260 lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~  339 (605)
T PLN02503        260 LKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLE  339 (605)
T ss_pred             CCeEEEccCceeecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccc
Confidence            23688888765431         111                                                      


Q ss_pred             ------CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH-------HHHHHh-hcc--------
Q 025259          156 ------AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND-------AVRKAL-EGK--------  213 (255)
Q Consensus       156 ------~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~-~~~--------  213 (255)
                            ....|.-+|+-.|.+++...    .++++..+.|+.|.+.+..+.+..-       ...... .+.        
T Consensus       340 ~~~~~~~pNtYt~TK~lAE~lV~~~~----~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~  415 (605)
T PLN02503        340 RAKLYGWQDTYVFTKAMGEMVINSMR----GDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADP  415 (605)
T ss_pred             hhhhCCCCChHHHHHHHHHHHHHHhc----CCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCC
Confidence                  01357778888777776322    3789999999888554433222110       000000 010        


Q ss_pred             CCCCCCCChHHHHHHHHHhcCC-C-CCCccccEEeeCCC
Q 025259          214 TLLNRLGTTGNMAAAIAFLASD-D-ASYITGETLVVAGG  250 (255)
Q Consensus       214 ~~~~~~~~~~~va~~~~~l~s~-~-~~~~~G~~i~~dgG  250 (255)
                      .........+.|+++++..+.. . .....++++++..+
T Consensus       416 ~~~~DiVPVD~vvna~i~a~a~~~~~~~~~~~vYn~ts~  454 (605)
T PLN02503        416 NGVLDVVPADMVVNATLAAMAKHGGAAKPEINVYQIASS  454 (605)
T ss_pred             CeeEeEEeecHHHHHHHHHHHhhhcccCCCCCEEEeCCC
Confidence            1112245567888887776321 1 11236899999877

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.31  E-value=6.4e-11  Score=99.83  Aligned_cols=194  Identities=14%  Similarity=0.111  Sum_probs=118.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC-CcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR-IDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~-~d~   92 (255)
                      +++||||+|.+|++++++|++.|+.|.++.|+++...       .  ..+..+.+|+.|++++..+++.. +.... +|.
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~   70 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA-------G--PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISA   70 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc-------C--CCCccccccCCCHHHHHHHHhcc-cCcCCceeE
Confidence            4899999999999999999999999999999986432       1  23456789999999999888643 22235 899


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      ++++++...  .        ..+        ....+++++...  .-.+||++||.....+.+       .+...+.+.+
T Consensus        71 v~~~~~~~~--~--------~~~--------~~~~~i~aa~~~--gv~~~V~~Ss~~~~~~~~-------~~~~~~~~l~  123 (285)
T TIGR03649        71 VYLVAPPIP--D--------LAP--------PMIKFIDFARSK--GVRRFVLLSASIIEKGGP-------AMGQVHAHLD  123 (285)
T ss_pred             EEEeCCCCC--C--------hhH--------HHHHHHHHHHHc--CCCEEEEeeccccCCCCc-------hHHHHHHHHH
Confidence            999887421  0        011        112334444433  224899999865433211       2322333322


Q ss_pred             HHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHH---h-hccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          173 ALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKA---L-EGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       173 ~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ..     .++....+.|+++...+...... ......   . ........+..++|+|+++..++....  ..|+.+.+-
T Consensus       124 ~~-----~gi~~tilRp~~f~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~--~~~~~~~l~  195 (285)
T TIGR03649       124 SL-----GGVEYTVLRPTWFMENFSEEFHV-EAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV--APNTDYVVL  195 (285)
T ss_pred             hc-----cCCCEEEEeccHHhhhhcccccc-cccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC--cCCCeEEee
Confidence            11     37889999999776554221100 000000   0 001112347889999999999886542  225666666


Q ss_pred             CCcc
Q 025259          249 GGMA  252 (255)
Q Consensus       249 gG~~  252 (255)
                      |+..
T Consensus       196 g~~~  199 (285)
T TIGR03649       196 GPEL  199 (285)
T ss_pred             CCcc
Confidence            6543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=99.30  E-value=1e-10  Score=102.61  Aligned_cols=201  Identities=14%  Similarity=0.140  Sum_probs=125.5

Q ss_pred             CCCCEEEEe----CCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHH-------HHHHHcCCeEEEEEecCCCHHHHHH
Q 025259           10 FQGKVAVVT----ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV-------EKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        10 l~~k~vlVt----G~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      ...++||||    ||+|.||++++++|+++|+.|++++|+.+......       .++...  .+.++.+|+.+   +..
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d---~~~  124 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSA--GVKTVWGDPAD---VKS  124 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhc--CceEEEecHHH---HHh
Confidence            345789999    99999999999999999999999999876432221       122222  36778888876   333


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC--
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA--  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~--  156 (255)
                      +++     ...+|++||+++..                     ..++..+++++...  .-.++|++||...+.....  
T Consensus       125 ~~~-----~~~~d~Vi~~~~~~---------------------~~~~~~ll~aa~~~--gvkr~V~~SS~~vyg~~~~~p  176 (378)
T PLN00016        125 KVA-----GAGFDVVYDNNGKD---------------------LDEVEPVADWAKSP--GLKQFLFCSSAGVYKKSDEPP  176 (378)
T ss_pred             hhc-----cCCccEEEeCCCCC---------------------HHHHHHHHHHHHHc--CCCEEEEEccHhhcCCCCCCC
Confidence            332     13699999997631                     11233445555432  2248999999865432111  


Q ss_pred             ------ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC---------CCCCCC
Q 025259          157 ------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL---------LNRLGT  221 (255)
Q Consensus       157 ------~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  221 (255)
                            ...+. +|...+.+.+    +.  ++++..+.|+.+..+..... ....+........+         ...+..
T Consensus       177 ~~E~~~~~p~~-sK~~~E~~l~----~~--~l~~~ilRp~~vyG~~~~~~-~~~~~~~~~~~~~~i~~~g~g~~~~~~i~  248 (378)
T PLN00016        177 HVEGDAVKPKA-GHLEVEAYLQ----KL--GVNWTSFRPQYIYGPGNNKD-CEEWFFDRLVRGRPVPIPGSGIQLTQLGH  248 (378)
T ss_pred             CCCCCcCCCcc-hHHHHHHHHH----Hc--CCCeEEEeceeEECCCCCCc-hHHHHHHHHHcCCceeecCCCCeeeceec
Confidence                  11122 7888877653    22  78999999998887642211 01112222222111         123567


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+|+++++..++...  ...|+++++.|+...
T Consensus       249 v~Dva~ai~~~l~~~--~~~~~~yni~~~~~~  278 (378)
T PLN00016        249 VKDLASMFALVVGNP--KAAGQIFNIVSDRAV  278 (378)
T ss_pred             HHHHHHHHHHHhcCc--cccCCEEEecCCCcc
Confidence            899999999888653  235799999887654

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.28  E-value=1.1e-11  Score=100.81  Aligned_cols=101  Identities=18%  Similarity=0.149  Sum_probs=78.8

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTAS-TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~-~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +=.||.. +||||+++|++|+++|++|+++++... +       ....    ...+|+++.++++++++.+.+.++++|+
T Consensus        16 VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l-------~~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        16 VRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-L-------KPEP----HPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             ceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-c-------cccc----CCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            3345554 678999999999999999999876311 1       1100    2458999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ  130 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                      +|||||+.. ..++.+.+.++|+++   +..+.+.+.+
T Consensus        84 LVnnAgv~d-~~~~~~~s~e~~~~~---~~~~~~~~~~  117 (227)
T TIGR02114        84 LIHSMAVSD-YTPVYMTDLEQVQAS---DNLNEFLSKQ  117 (227)
T ss_pred             EEECCEecc-ccchhhCCHHHHhhh---cchhhhhccc
Confidence            999999865 678889999999877   4446666665

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.27  E-value=1.6e-10  Score=94.09  Aligned_cols=205  Identities=15%  Similarity=0.052  Sum_probs=137.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++.+|+||||+|.||+++|.+|..+|+.|+++|.-...-++....+-.. .++..+.-|+..+     ++.       
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~-~~fel~~hdv~~p-----l~~-------   90 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGH-PNFELIRHDVVEP-----LLK-------   90 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccC-cceeEEEeechhH-----HHH-------
Confidence            457889999999999999999999999999999998776555444443222 3455666666654     333       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc----------------C
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY----------------Q  152 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~----------------~  152 (255)
                      .+|-++|.|+..+ +......+    .+.+.+|+.++...+..+..-.   .++++.|+...+                .
T Consensus        91 evD~IyhLAapas-p~~y~~np----vktIktN~igtln~lglakrv~---aR~l~aSTseVYgdp~~hpq~e~ywg~vn  162 (350)
T KOG1429|consen   91 EVDQIYHLAAPAS-PPHYKYNP----VKTIKTNVIGTLNMLGLAKRVG---ARFLLASTSEVYGDPLVHPQVETYWGNVN  162 (350)
T ss_pred             HhhhhhhhccCCC-CcccccCc----cceeeecchhhHHHHHHHHHhC---ceEEEeecccccCCcccCCCccccccccC
Confidence            4788999998765 22222222    3568999999999988877643   478888877654                1


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCC---------CCCCC
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLL---------NRLGT  221 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~---------~~~~~  221 (255)
                      +..+.+.|.-.|...+.|+....++.  ||.+....+-.+..|...-...  -.-+..+.....|+         +.+..
T Consensus       163 pigpr~cydegKr~aE~L~~~y~k~~--giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~y  240 (350)
T KOG1429|consen  163 PIGPRSCYDEGKRVAETLCYAYHKQE--GIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQY  240 (350)
T ss_pred             cCCchhhhhHHHHHHHHHHHHhhccc--CcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEe
Confidence            23456789999999999999888887  5555555555444443211111  12233333333333         34667


Q ss_pred             hHHHHHHHHHhcCCC
Q 025259          222 TGNMAAAIAFLASDD  236 (255)
Q Consensus       222 ~~~va~~~~~l~s~~  236 (255)
                      ..|+++.++.|...+
T Consensus       241 vsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  241 VSDLVEGLLRLMESD  255 (350)
T ss_pred             HHHHHHHHHHHhcCC
Confidence            788888888887654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.19  E-value=3.1e-10  Score=88.79  Aligned_cols=168  Identities=17%  Similarity=0.158  Sum_probs=115.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++||||+ |+|.++++.|++.|++|++++|+.+..+.+...+.. ..++.++.+|++|++++.++++.+.+.++++|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~-~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTT-PESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhc-CCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            68999998 677789999999999999999998877776655543 4578889999999999999999999999999999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      |+.+-..                       ++-.+.+++...-.  +.-+++++-.+.+..+                  
T Consensus        80 v~~vh~~-----------------------~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~------------------  118 (177)
T PRK08309         80 VAWIHSS-----------------------AKDALSVVCRELDGSSETYRLFHVLGSAASDP------------------  118 (177)
T ss_pred             EEecccc-----------------------chhhHHHHHHHHccCCCCceEEEEeCCcCCch------------------
Confidence            9877643                       22334444444321  2236887764443221                  


Q ss_pred             HHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC-CCCCcccc
Q 025259          172 KALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYITGE  243 (255)
Q Consensus       172 ~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~-~~~~~~G~  243 (255)
                      +..+..+.. .....-|..|++..+-.                   .|+.+-+|+++.++.-+.. ....+.|+
T Consensus       119 ~~~~~~~~~~~~~~~~i~lgf~~~~~~-------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 RIPSEKIGPARCSYRRVILGFVLEDTY-------------------SRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             hhhhhhhhhcCCceEEEEEeEEEeCCc-------------------cccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence            111112222 45677788888866532                   3466777888877765543 44445554

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.07  E-value=1.5e-09  Score=88.79  Aligned_cols=198  Identities=18%  Similarity=0.134  Sum_probs=120.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      |+|+||+|.+|+.+++.|++.++.|.++.|+...  ...++++..|.  .++.+|+.|++++.++++       +.|.++
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~--~~~~~l~~~g~--~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSS--DRAQQLQALGA--EVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHH--HHHHHHHHTTT--EEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccch--hhhhhhhcccc--eEeecccCCHHHHHHHHc-------CCceEE
Confidence            7999999999999999999999999999999832  33455566665  456999999999888887       899999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-C---CCChhhHHhHHHHHHH
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-P---SAMAMYGVTKTALLGL  170 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-~---~~~~~y~~sKaa~~~l  170 (255)
                      ++.+... .      ..  .        .....+++++...-  -.++|+ ||...... .   .+...+-..|..++.+
T Consensus        70 ~~~~~~~-~------~~--~--------~~~~~li~Aa~~ag--Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~  129 (233)
T PF05368_consen   70 SVTPPSH-P------SE--L--------EQQKNLIDAAKAAG--VKHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEY  129 (233)
T ss_dssp             EESSCSC-C------CH--H--------HHHHHHHHHHHHHT---SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHH
T ss_pred             eecCcch-h------hh--h--------hhhhhHHHhhhccc--cceEEE-EEecccccccccccccchhhhhhhhhhhh
Confidence            9888642 0      11  1        12334556665542  236775 44433321 1   1122333467666655


Q ss_pred             HHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHH---hhccCCC---CCC-CChHHHHHHHHHhcCCCCCCcccc
Q 025259          171 TKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKA---LEGKTLL---NRL-GTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       171 ~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      .+..      +++...|.||+....+.............   ..-..+.   ..+ .+.+|+++++..++.....+-+|.
T Consensus       130 l~~~------~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~  203 (233)
T PF05368_consen  130 LRES------GIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGK  203 (233)
T ss_dssp             HHHC------TSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEE
T ss_pred             hhhc------cccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCE
Confidence            5433      78999999997654443211110000000   0000111   123 378999999999998755544788


Q ss_pred             EEeeCC
Q 025259          244 TLVVAG  249 (255)
Q Consensus       244 ~i~~dg  249 (255)
                      .+.+.|
T Consensus       204 ~~~~~~  209 (233)
T PF05368_consen  204 TIFLAG  209 (233)
T ss_dssp             EEEEGG
T ss_pred             EEEeCC
Confidence            887755

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=98.97  E-value=1.3e-08  Score=83.04  Aligned_cols=197  Identities=19%  Similarity=0.177  Sum_probs=113.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      |+||||+|-||++++..|.+.|+.|+++.|+.+..+..          ...   .+...+.+....+      ..+|++|
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~----------~~~---~v~~~~~~~~~~~------~~~DavI   61 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN----------LHP---NVTLWEGLADALT------LGIDAVI   61 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh----------cCc---cccccchhhhccc------CCCCEEE
Confidence            58999999999999999999999999999998764331          110   0111122222111      1699999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH----hHHHHHHH
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV----TKTALLGL  170 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~----sKaa~~~l  170 (255)
                      |.||..-..+.   -+.+.=++.++.-+..+-.+.+.+... .+..++..-+|..++.+......|.-    ..-.+..+
T Consensus        62 NLAG~~I~~rr---Wt~~~K~~i~~SRi~~T~~L~e~I~~~-~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~l  137 (297)
T COG1090          62 NLAGEPIAERR---WTEKQKEEIRQSRINTTEKLVELIAAS-ETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQL  137 (297)
T ss_pred             ECCCCcccccc---CCHHHHHHHHHHHhHHHHHHHHHHHhc-cCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHH
Confidence            99997532221   244444555666666666666555543 23344544555556655443333322    23345566


Q ss_pred             HHHHHHHhC---C-CcEEEEEeCCcccCh---hhhhhcCCHHHHHHhhccC----CCCCCCChHHHHHHHHHhcCCC
Q 025259          171 TKALAAEMA---P-DTRVNCVAPGFVPTH---FAQALLGNDAVRKALEGKT----LLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       171 ~~~la~e~~---~-~i~v~~v~pg~v~t~---~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |+.|=.+..   . ++||..+..|.|-.+   +.....+.  +.-......    -.-.++-.||+++++.|++.++
T Consensus       138 c~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~--fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~  212 (297)
T COG1090         138 CQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPL--FKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENE  212 (297)
T ss_pred             HHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcch--hhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCc
Confidence            666655532   3 889999999988653   22211110  000000000    0112456799999999999663

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.97  E-value=1.4e-08  Score=80.31  Aligned_cols=201  Identities=16%  Similarity=0.127  Sum_probs=121.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++|+|||++|-+|+||.+.+.+.|.   +.++.+..+                     +|+++..+.+.+|++.     +
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~skd---------------------~DLt~~a~t~~lF~~e-----k   55 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSKD---------------------ADLTNLADTRALFESE-----K   55 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecccc---------------------ccccchHHHHHHHhcc-----C
Confidence            6899999999999999999999876   355555432                     8999999999999975     7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc----------------CC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY----------------QP  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~----------------~~  153 (255)
                      +-.+||.|+....--.....+.+-|...+++    .-++++.+..+-.+  +++...|..=+                .+
T Consensus        56 PthVIhlAAmVGGlf~N~~ynldF~r~Nl~i----ndNVlhsa~e~gv~--K~vsclStCIfPdkt~yPIdEtmvh~gpp  129 (315)
T KOG1431|consen   56 PTHVIHLAAMVGGLFHNNTYNLDFIRKNLQI----NDNVLHSAHEHGVK--KVVSCLSTCIFPDKTSYPIDETMVHNGPP  129 (315)
T ss_pred             CceeeehHhhhcchhhcCCCchHHHhhccee----chhHHHHHHHhchh--hhhhhcceeecCCCCCCCCCHHHhccCCC
Confidence            8889998864321111122233434333333    33344444443221  23333332211                12


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC----HHHHHHh--------------hccCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN----DAVRKAL--------------EGKTL  215 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~--------------~~~~~  215 (255)
                      .|....|+.+|..+.-..+.++.+++.  ...++.|-.+..|--.-.++.    +.++.++              ....|
T Consensus       130 hpsN~gYsyAKr~idv~n~aY~~qhg~--~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~P  207 (315)
T KOG1431|consen  130 HPSNFGYSYAKRMIDVQNQAYRQQHGR--DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSP  207 (315)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCC--ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCCh
Confidence            355678999999998888999999854  445555544443321100000    1111111              12346


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          216 LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       216 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ++.+...+|.|++++|++.+....   +.|.+..|
T Consensus       208 lRqFiys~DLA~l~i~vlr~Y~~v---Epiils~g  239 (315)
T KOG1431|consen  208 LRQFIYSDDLADLFIWVLREYEGV---EPIILSVG  239 (315)
T ss_pred             HHHHhhHhHHHHHHHHHHHhhcCc---cceEeccC
Confidence            677888899999999999765432   44444444

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.88  E-value=1.3e-08  Score=85.96  Aligned_cols=84  Identities=23%  Similarity=0.303  Sum_probs=67.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+. |++++|+.   ++.+++.+++...+..+....+|+++.++++..++   
T Consensus       123 ~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~---  198 (289)
T PRK12548        123 DVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA---  198 (289)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc---
Confidence            578999999999 69999999999999997 99999997   66777777776555555666789888777665444   


Q ss_pred             HHcCCCcEEEECCCCC
Q 025259           85 EKYGRIDVFVLNAAVN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                          ..|+||||-...
T Consensus       199 ----~~DilINaTp~G  210 (289)
T PRK12548        199 ----SSDILVNATLVG  210 (289)
T ss_pred             ----cCCEEEEeCCCC
Confidence                569999988654

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.88  E-value=2.9e-07  Score=82.47  Aligned_cols=220  Identities=19%  Similarity=0.138  Sum_probs=148.4

Q ss_pred             ccCCCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         8 ~~l~~k~vlVtG~~-~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      .++.++.+|||||+ +.||.+++..|+..|+.||++..+- +.-.+.++.+-.    .+..+.+++++..+...++.+++
T Consensus       392 ~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIe  471 (866)
T COG4982         392 GTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIE  471 (866)
T ss_pred             CCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHH
Confidence            46789999999987 6799999999999999999887663 333455555543    36789999999999999999999


Q ss_pred             HHHHHcC--------------CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-----CeE
Q 025259           82 KTVEKYG--------------RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-----SSV  142 (255)
Q Consensus        82 ~~~~~~g--------------~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-----~~i  142 (255)
                      .|-++.-              .++.++--|.... .+.+.+..++ -+-.+++-+++...++-.+.++-..+     -++
T Consensus       472 wIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v-~G~l~~agsr-aE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hV  549 (866)
T COG4982         472 WIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRV-SGELADAGSR-AEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHV  549 (866)
T ss_pred             HhccccccccCCcceecccccCcceeeecccCCc-cCccccCCch-HHHHHHHHHHHHHHHHHHhhhhccccCcccceEE
Confidence            9986432              2567777777654 4455554444 34556788888888888887765322     245


Q ss_pred             EEEcCc-CccCCCCCChhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccC-hhhhhhcCCHHHHHHhhccCCCCC
Q 025259          143 VFISSI-AGYQPPSAMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPT-HFAQALLGNDAVRKALEGKTLLNR  218 (255)
Q Consensus       143 v~vss~-~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t-~~~~~~~~~~~~~~~~~~~~~~~~  218 (255)
                      |.=.|. .+..  .+..+|+-+|++++.++.-|-.|-+ . .+.+..-.=||++. .+...........+.+.     -+
T Consensus       550 VLPgSPNrG~F--GgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLMg~Ndiiv~aiEk~G-----V~  622 (866)
T COG4982         550 VLPGSPNRGMF--GGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLMGHNDIIVAAIEKAG-----VR  622 (866)
T ss_pred             EecCCCCCCcc--CCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccccCCcchhHHHHHHhC-----ce
Confidence            543333 2222  3567899999999999988887752 2 45555555678864 33322211111222111     13


Q ss_pred             CCChHHHHHHHHHhcCCC
Q 025259          219 LGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~  236 (255)
                      .-+++|+|..++-|++.+
T Consensus       623 tyS~~EmA~~LLgL~sae  640 (866)
T COG4982         623 TYSTDEMAFNLLGLASAE  640 (866)
T ss_pred             ecCHHHHHHHHHhhccHH
Confidence            557888998888888764

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.88  E-value=1.6e-08  Score=95.76  Aligned_cols=168  Identities=18%  Similarity=0.209  Sum_probs=144.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhH--HH-HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKN--VD-KAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~--~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .|.++|+||-||.|.+++.+|...|++ ++++.|+--+  -+ .....++..|.++.+-.-|++..+....+++... ++
T Consensus      1768 eksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-kl 1846 (2376)
T KOG1202|consen 1768 EKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-KL 1846 (2376)
T ss_pred             cceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-hc
Confidence            689999999999999999999999998 8899887432  22 3566677788899988899999999888888764 56


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +.+-.++|.|.+.. ...+++-+++.|++.-+-.+.++.++-+..++....-.-+|..||...-.+..+...|+-+.+++
T Consensus      1847 ~~vGGiFnLA~VLR-D~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~M 1925 (2376)
T KOG1202|consen 1847 GPVGGIFNLAAVLR-DGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAM 1925 (2376)
T ss_pred             ccccchhhHHHHHH-hhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHH
Confidence            78999999999886 88899999999999999999999999998887654445799999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCC
Q 025259          168 LGLTKALAAEMAPD  181 (255)
Q Consensus       168 ~~l~~~la~e~~~~  181 (255)
                      +.++..-..+--||
T Consensus      1926 ERiceqRr~~GfPG 1939 (2376)
T KOG1202|consen 1926 ERICEQRRHEGFPG 1939 (2376)
T ss_pred             HHHHHHhhhcCCCc
Confidence            99998777664443

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.88  E-value=1.3e-08  Score=89.25  Aligned_cols=80  Identities=23%  Similarity=0.268  Sum_probs=62.9

Q ss_pred             ccCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC
Q 025259            8 KRFQGKVAVVTAS----------------TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS   71 (255)
Q Consensus         8 ~~l~~k~vlVtG~----------------~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~   71 (255)
                      .+++||++|||||                +|++|.++|++|++.|++|++++++.+ ++.        ..  ....+|++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~--------~~--~~~~~dv~  252 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT--------PA--GVKRIDVE  252 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC--------CC--CcEEEccC
Confidence            4589999999999                445999999999999999999988753 110        11  13468999


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           72 NEQHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +.+++.+.+.   +.++++|++|||||+..
T Consensus       253 ~~~~~~~~v~---~~~~~~DilI~~Aav~d  279 (399)
T PRK05579        253 SAQEMLDAVL---AALPQADIFIMAAAVAD  279 (399)
T ss_pred             CHHHHHHHHH---HhcCCCCEEEEcccccc
Confidence            9888776665   45788999999999864

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.85  E-value=8.9e-07  Score=73.81  Aligned_cols=194  Identities=15%  Similarity=0.096  Sum_probs=124.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      .++|||||+|.+|++++++|.+.|+.|++..|+.+......       ..+.+...|+.++..+...++       +.|.
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~-------~~v~~~~~d~~~~~~l~~a~~-------G~~~   66 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA-------GGVEVVLGDLRDPKSLVAGAK-------GVDG   66 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc-------CCcEEEEeccCCHhHHHHHhc-------cccE
Confidence            36999999999999999999999999999999998876654       467888999999999988877       7898


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      +++..+... ...          ..............+...   ....+++.+|...+..  .....|..+|...+...+
T Consensus        67 ~~~i~~~~~-~~~----------~~~~~~~~~~~~~a~~a~---~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~  130 (275)
T COG0702          67 VLLISGLLD-GSD----------AFRAVQVTAVVRAAEAAG---AGVKHGVSLSVLGADA--ASPSALARAKAAVEAALR  130 (275)
T ss_pred             EEEEecccc-ccc----------chhHHHHHHHHHHHHHhc---CCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHH
Confidence            888888642 211          012223334444444444   2233677777665544  345678999988887775


Q ss_pred             HHHHHhCCCcEEEEEe-CCcccChhhhhhcCCHHHHHHhhcc---CC----CCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          173 ALAAEMAPDTRVNCVA-PGFVPTHFAQALLGNDAVRKALEGK---TL----LNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       173 ~la~e~~~~i~v~~v~-pg~v~t~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +.      ++.-..+. ++++...... .     ........   .+    .-.....+|++......+..+.  ..|+.
T Consensus       131 ~s------g~~~t~lr~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~~~~  196 (275)
T COG0702         131 SS------GIPYTTLRRAAFYLGAGAA-F-----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TAGRT  196 (275)
T ss_pred             hc------CCCeEEEecCeeeeccchh-H-----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--ccCcE
Confidence            33      45534444 3333322110 0     00111111   11    1235667899988887775544  55666


Q ss_pred             EeeCCC
Q 025259          245 LVVAGG  250 (255)
Q Consensus       245 i~~dgG  250 (255)
                      +.+-|=
T Consensus       197 ~~l~g~  202 (275)
T COG0702         197 YELAGP  202 (275)
T ss_pred             EEccCC
Confidence            666553

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.79  E-value=6.3e-08  Score=85.34  Aligned_cols=181  Identities=18%  Similarity=0.192  Sum_probs=118.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChh---HHHHHHHH--------HHHc----CCeEEEEE
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQK---NVDKAVEK--------LKAL----GIEVIGII   67 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~---~~~~~~~~--------~~~~----~~~~~~~~   67 (255)
                      ..+-+++|+++||||+|++|+-+++.|++.-.   ++++.-|...   .-++...+        +.+.    -.++..+.
T Consensus         6 i~~f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~   85 (467)
T KOG1221|consen    6 IVQFYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIA   85 (467)
T ss_pred             HHHHhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceecc
Confidence            34458999999999999999999999998632   4777777532   12222222        2222    24788999


Q ss_pred             ecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           68 CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        68 ~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +|+++++---+.-+.- .....+|++||+|+...+        .+-++..+.+|++|+..+++-+.... +-...+++|+
T Consensus        86 GDi~~~~LGis~~D~~-~l~~eV~ivih~AAtvrF--------de~l~~al~iNt~Gt~~~l~lak~~~-~l~~~vhVST  155 (467)
T KOG1221|consen   86 GDISEPDLGISESDLR-TLADEVNIVIHSAATVRF--------DEPLDVALGINTRGTRNVLQLAKEMV-KLKALVHVST  155 (467)
T ss_pred             ccccCcccCCChHHHH-HHHhcCCEEEEeeeeecc--------chhhhhhhhhhhHhHHHHHHHHHHhh-hhheEEEeeh
Confidence            9998754322211111 111379999999997652        25578889999999999999888754 3347888887


Q ss_pred             cCccC--------CC--------------------------------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEE
Q 025259          148 IAGYQ--------PP--------------------------------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV  187 (255)
Q Consensus       148 ~~~~~--------~~--------------------------------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v  187 (255)
                      ..+..        ++                                ...-.|.-+||-.+++.+.-+.    ++.+..+
T Consensus       156 Ay~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~----~lPivIi  231 (467)
T KOG1221|consen  156 AYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAE----NLPLVII  231 (467)
T ss_pred             hheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhcc----CCCeEEE
Confidence            65531        00                                1233477777777777653333    5788888


Q ss_pred             eCCcccChhhhhh
Q 025259          188 APGFVPTHFAQAL  200 (255)
Q Consensus       188 ~pg~v~t~~~~~~  200 (255)
                      .|+.|-+.+..+.
T Consensus       232 RPsiI~st~~EP~  244 (467)
T KOG1221|consen  232 RPSIITSTYKEPF  244 (467)
T ss_pred             cCCceeccccCCC
Confidence            8887766554433

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.74  E-value=1.4e-07  Score=75.07  Aligned_cols=84  Identities=31%  Similarity=0.305  Sum_probs=67.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++++++|+||+|++|+++++.|++.|++|++++|+.+.+++..+++.+.. ......+|..+.+++.+.++      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARF-GEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhc-CCcEEEeeCCCHHHHHHHHh------
Confidence            47889999999999999999999999999999999999988888877775321 22345678888887766664      


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++|++...
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             58988886653

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.67  E-value=1.2e-07  Score=77.27  Aligned_cols=99  Identities=18%  Similarity=0.124  Sum_probs=66.9

Q ss_pred             EEEEeCCCCc-hHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQG-IGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +=.||+.++| +|+++|++|+++|+.|++++|......       .....+.++.++  +   .+++.+.+.+.++.+|+
T Consensus        17 VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~-------~~~~~v~~i~v~--s---~~~m~~~l~~~~~~~Di   84 (229)
T PRK06732         17 VRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP-------EPHPNLSIIEIE--N---VDDLLETLEPLVKDHDV   84 (229)
T ss_pred             ceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC-------CCCCCeEEEEEe--c---HHHHHHHHHHHhcCCCE
Confidence            5567776655 999999999999999999987642100       011234444432  2   22233334444467999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSS  125 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~  125 (255)
                      +|||||+.. ..+....+.++|.+++++|.+-.
T Consensus        85 vIh~AAvsd-~~~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         85 LIHSMAVSD-YTPVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEeCCccCC-ceehhhhhhhhhhhhhhhhhhhc
Confidence            999999875 56677778888999988876654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.65  E-value=1.5e-07  Score=82.41  Aligned_cols=113  Identities=17%  Similarity=0.164  Sum_probs=77.1

Q ss_pred             ccCCCCEEEEeCC---------------CCc-hHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC
Q 025259            8 KRFQGKVAVVTAS---------------TQG-IGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS   71 (255)
Q Consensus         8 ~~l~~k~vlVtG~---------------~~g-iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~   71 (255)
                      .+++||++|||||               ||| +|.++++.|+..|++|+++.+..+..         ...  ....+|++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~---------~~~--~~~~~~v~  249 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL---------TPP--GVKSIKVS  249 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC---------CCC--CcEEEEec
Confidence            3589999999999               667 99999999999999999888765321         111  22568999


Q ss_pred             CHHHH-HHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCC--HHHHHHHHHHHhHHHHHHHHHHHhc
Q 025259           72 NEQHR-KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK--ESVLDKLWEINVKSSILLMQDAAPH  135 (255)
Q Consensus        72 ~~~~~-~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~~~~~~~~~  135 (255)
                      +.+++ +.++++.   ++.+|++|+|||+.. +.+....+  .+...+.+..|+.-.--+++.+...
T Consensus       250 ~~~~~~~~~~~~~---~~~~D~~i~~Aavsd-~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~  312 (390)
T TIGR00521       250 TAEEMLEAALNEL---AKDFDIFISAAAVAD-FKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKI  312 (390)
T ss_pred             cHHHHHHHHHHhh---cccCCEEEEcccccc-ccccccccccccccCCceeEEEEeCcHHHHHHHhh
Confidence            98888 5555443   467999999999875 43332111  1111223556666666666666654

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.54  E-value=1.3e-06  Score=71.78  Aligned_cols=210  Identities=17%  Similarity=0.103  Sum_probs=133.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.+|-++-|.||+|.+|+-++.+|++.|-.|++--|..+.--...+-.-+ -+++.+.+.|+.|+++++++++       
T Consensus        58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGd-LGQvl~~~fd~~DedSIr~vvk-------  129 (391)
T KOG2865|consen   58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGD-LGQVLFMKFDLRDEDSIRAVVK-------  129 (391)
T ss_pred             cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeeccc-ccceeeeccCCCCHHHHHHHHH-------
Confidence            45677899999999999999999999999999988876532222111111 2589999999999999999988       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      .-+++||..|--- +.  ...+.      -++|+.++-.+.+.+.+.-.+  ++|++|+..+-  ....+-|=-+|++.+
T Consensus       130 ~sNVVINLIGrd~-eT--knf~f------~Dvn~~~aerlAricke~GVe--rfIhvS~Lgan--v~s~Sr~LrsK~~gE  196 (391)
T KOG2865|consen  130 HSNVVINLIGRDY-ET--KNFSF------EDVNVHIAERLARICKEAGVE--RFIHVSCLGAN--VKSPSRMLRSKAAGE  196 (391)
T ss_pred             hCcEEEEeecccc-cc--CCccc------ccccchHHHHHHHHHHhhChh--heeehhhcccc--ccChHHHHHhhhhhH
Confidence            5899999999643 22  22222      357777888888777765433  89999987743  333445666777776


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHh-hccCCC--------CCCCChHHHHHHHHHhcCCCCCC
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKAL-EGKTLL--------NRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      --++   .++ |  -...|.|.-+...--+-.  .....-+. ....|+        +.....-|||.+++--+.+..  
T Consensus       197 ~aVr---daf-P--eAtIirPa~iyG~eDrfl--n~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~--  266 (391)
T KOG2865|consen  197 EAVR---DAF-P--EATIIRPADIYGTEDRFL--NYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD--  266 (391)
T ss_pred             HHHH---hhC-C--cceeechhhhcccchhHH--HHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc--
Confidence            6554   233 2  234566765544311100  01111111 122222        223445688888888776553  


Q ss_pred             ccccEEeeCC
Q 025259          240 ITGETLVVAG  249 (255)
Q Consensus       240 ~~G~~i~~dg  249 (255)
                      -.|.++..-|
T Consensus       267 s~Gktye~vG  276 (391)
T KOG2865|consen  267 SMGKTYEFVG  276 (391)
T ss_pred             ccCceeeecC
Confidence            4577776654

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.53  E-value=1.9e-06  Score=75.00  Aligned_cols=169  Identities=15%  Similarity=0.149  Sum_probs=104.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH-HHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH-RKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   87 (255)
                      ..+..+|+|+||+|++|+-+++.|.+.|+.|.++-|+.+..+.... +.........+..|...+.+ ...+++.    .
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~-~~~~d~~~~~v~~~~~~~~d~~~~~~~~----~  150 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLG-VFFVDLGLQNVEADVVTAIDILKKLVEA----V  150 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhc-ccccccccceeeeccccccchhhhhhhh----c
Confidence            3567799999999999999999999999999999999888776654 11112234444555444333 2333322    2


Q ss_pred             C-CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 G-RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      + ...+++-++|...  .. +     +..--..+...|+.++++++.....+  ++++++|+.+....+....+..   .
T Consensus       151 ~~~~~~v~~~~ggrp--~~-e-----d~~~p~~VD~~g~knlvdA~~~aGvk--~~vlv~si~~~~~~~~~~~~~~---~  217 (411)
T KOG1203|consen  151 PKGVVIVIKGAGGRP--EE-E-----DIVTPEKVDYEGTKNLVDACKKAGVK--RVVLVGSIGGTKFNQPPNILLL---N  217 (411)
T ss_pred             cccceeEEecccCCC--Cc-c-----cCCCcceecHHHHHHHHHHHHHhCCc--eEEEEEeecCcccCCCchhhhh---h
Confidence            2 2456666666533  11 1     22223456667888899998655433  8999999888766555444442   2


Q ss_pred             HHHHHHHH--HHHhCC-CcEEEEEeCCcccCh
Q 025259          167 LLGLTKAL--AAEMAP-DTRVNCVAPGFVPTH  195 (255)
Q Consensus       167 ~~~l~~~l--a~e~~~-~i~v~~v~pg~v~t~  195 (255)
                      ...+.+.+  ...+.. ++....|.||....+
T Consensus       218 ~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  218 GLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            22222211  122233 888999999876554

>PLN00106 malate dehydrogenase

Probab=98.48  E-value=1.3e-06  Score=74.61  Aligned_cols=149  Identities=15%  Similarity=0.176  Sum_probs=101.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++|+|||++|.+|.+++..|+..+.  .++++|+++  .+....++.+.....  ...++++.+++...++       .
T Consensus        18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~--~~g~a~Dl~~~~~~~--~i~~~~~~~d~~~~l~-------~   86 (323)
T PLN00106         18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN--TPGVAADVSHINTPA--QVRGFLGDDQLGDALK-------G   86 (323)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC--CCeeEchhhhCCcCc--eEEEEeCCCCHHHHcC-------C
Confidence            56899999999999999999997664  599999987  222223444333222  2234333333333333       7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc----c--------CCCCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG----Y--------QPPSAM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~----~--------~~~~~~  157 (255)
                      .|++|+.||....+    .   ..+++.+..|+.....+.+.+.++- +++.++.+|....    .        .++++.
T Consensus        87 aDiVVitAG~~~~~----g---~~R~dll~~N~~i~~~i~~~i~~~~-p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~  158 (323)
T PLN00106         87 ADLVIIPAGVPRKP----G---MTRDDLFNINAGIVKTLCEAVAKHC-PNALVNIISNPVNSTVPIAAEVLKKAGVYDPK  158 (323)
T ss_pred             CCEEEEeCCCCCCC----C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCCccccHHHHHHHHHHcCCCCcc
Confidence            99999999975321    1   3367779999999998888888775 3445555665553    1        345667


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC
Q 025259          158 AMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~  179 (255)
                      -.|+.++---+.|-..++.++.
T Consensus       159 ~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        159 KLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             eEEEEecchHHHHHHHHHHHhC
Confidence            7899988666778888888875

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.40  E-value=4.6e-07  Score=72.77  Aligned_cols=218  Identities=16%  Similarity=0.092  Sum_probs=139.5

Q ss_pred             cCCCC-EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH-HHHHHHH-----cCCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGK-VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKA-----LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k-~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+.| ++||||-+|-=|+-+++-|+.+|+.|..+-|..+.... -++++-.     .+......-+|++|...+.+++.
T Consensus        24 ~~r~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~  103 (376)
T KOG1372|consen   24 AFRPRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIS  103 (376)
T ss_pred             CcccceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHh
Confidence            34444 88999999999999999999999999988776655443 2344422     25667778899999999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCc----------
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAG----------  150 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~----------  150 (255)
                      .+     +++=+.|.|+... .+    .+.+--+-.-++...|++.++.+....-. +.-++.-.|+..-          
T Consensus       104 ~i-----kPtEiYnLaAQSH-Vk----vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  104 TI-----KPTEVYNLAAQSH-VK----VSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             cc-----Cchhhhhhhhhcc-eE----EEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcc
Confidence            87     6887888887653 22    22222334456778899999999887543 3223333333221          


Q ss_pred             -cCCCCCChhhHHhHHHHHHHHHHHHHHh---CC-CcEEEEEeCCcccChhhhhhc-------CCHHHHHHhhccCCCCC
Q 025259          151 -YQPPSAMAMYGVTKTALLGLTKALAAEM---AP-DTRVNCVAPGFVPTHFAQALL-------GNDAVRKALEGKTLLNR  218 (255)
Q Consensus       151 -~~~~~~~~~y~~sKaa~~~l~~~la~e~---~~-~i~v~~v~pg~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~  218 (255)
                       ..|+.+.++|+++|-+...++-.++..+   +- ||-+|.=+|.-=.+-.++.+.       -..+-.-.+.+....+.
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence             1355678899999987666555555444   33 788888888522222222111       00000011112233455


Q ss_pred             CCChHHHHHHHHHhcCCC
Q 025259          219 LGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~  236 (255)
                      ++-..|-+++++.++.++
T Consensus       254 WGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             cchhHHHHHHHHHHHhcC
Confidence            677788888888877654

>PRK09620 hypothetical protein; Provisional

Probab=98.40  E-value=5e-07  Score=73.54  Aligned_cols=83  Identities=18%  Similarity=0.222  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259           10 FQGKVAVVTAST----------------QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus        10 l~~k~vlVtG~~----------------~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      |+||+||||+|.                |.+|.++|++|++.|+.|+++++.......   .+ ..+..+..+..|....
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~---~~-~~~~~~~~V~s~~d~~   76 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN---DI-NNQLELHPFEGIIDLQ   76 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc---cc-CCceeEEEEecHHHHH
Confidence            579999999987                999999999999999999988764321110   00 0122333444322222


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +.+    .++.+. .++|++||+|++..
T Consensus        77 ~~l----~~~~~~-~~~D~VIH~AAvsD   99 (229)
T PRK09620         77 DKM----KSIITH-EKVDAVIMAAAGSD   99 (229)
T ss_pred             HHH----HHHhcc-cCCCEEEECccccc
Confidence            233    332221 26899999999865

>PTZ00325 malate dehydrogenase; Provisional

Probab=98.30  E-value=5.6e-06  Score=70.71  Aligned_cols=147  Identities=16%  Similarity=0.129  Sum_probs=94.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.++++|||++|.+|..++..|+..+  ..++++|++.  .+....++.+....  ....+.+++.++.+.++      
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~--~~g~a~Dl~~~~~~--~~v~~~td~~~~~~~l~------   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVG--APGVAADLSHIDTP--AKVTGYADGELWEKALR------   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCC--CcccccchhhcCcC--ceEEEecCCCchHHHhC------
Confidence            567899999999999999999998655  4699999932  23223344443322  23345655444333333      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-------------CCC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-------------QPP  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-------------~~~  154 (255)
                       ..|++|+++|...  .+     .+.+.+.+..|+...-.+.+.+.++-.  .++|+++|....             .++
T Consensus        76 -gaDvVVitaG~~~--~~-----~~tR~dll~~N~~i~~~i~~~i~~~~~--~~iviv~SNPvdv~~~~~~~~~~~~sg~  145 (321)
T PTZ00325         76 -GADLVLICAGVPR--KP-----GMTRDDLFNTNAPIVRDLVAAVASSAP--KAIVGIVSNPVNSTVPIAAETLKKAGVY  145 (321)
T ss_pred             -CCCEEEECCCCCC--CC-----CCCHHHHHHHHHHHHHHHHHHHHHHCC--CeEEEEecCcHHHHHHHHHhhhhhccCC
Confidence             7999999999743  11     123667799999999999998888732  256666654421             234


Q ss_pred             CCChhhHHhHHHHHH--HHHHHHHHh
Q 025259          155 SAMAMYGVTKTALLG--LTKALAAEM  178 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~--l~~~la~e~  178 (255)
                      |+.-.|+.+ . ++.  |-..++..+
T Consensus       146 p~~~viG~g-~-LDs~R~r~~la~~l  169 (321)
T PTZ00325        146 DPRKLFGVT-T-LDVVRARKFVAEAL  169 (321)
T ss_pred             Chhheeech-h-HHHHHHHHHHHHHh
Confidence            556667776 2 443  445555555

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.30  E-value=4.3e-06  Score=75.11  Aligned_cols=77  Identities=27%  Similarity=0.424  Sum_probs=60.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+++ +|.++++.|++.|+.|++++++. +.+++..+++...+.  .++.+|..+            +..
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~--~~~~~~~~~------------~~~   66 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGI--ELVLGEYPE------------EFL   66 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCC--EEEeCCcch------------hHh
Confidence            57899999999888 99999999999999999999985 455555566655553  456677765            112


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      +.+|++|+++|..
T Consensus        67 ~~~d~vv~~~g~~   79 (450)
T PRK14106         67 EGVDLVVVSPGVP   79 (450)
T ss_pred             hcCCEEEECCCCC
Confidence            4799999999974

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=98.28  E-value=4.3e-06  Score=72.61  Aligned_cols=77  Identities=22%  Similarity=0.314  Sum_probs=66.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++||.|+ |++|+.++..|++.| .+|.+.+|+.+.+++..+..   +.++....+|+.+.+++.++++       ..|
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~---~~~v~~~~vD~~d~~al~~li~-------~~d   70 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI---GGKVEALQVDAADVDALVALIK-------DFD   70 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc---cccceeEEecccChHHHHHHHh-------cCC
Confidence            57899999 999999999999999 78999999998887765543   3478999999999999988888       459


Q ss_pred             EEEECCCCC
Q 025259           92 VFVLNAAVN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      ++||++...
T Consensus        71 ~VIn~~p~~   79 (389)
T COG1748          71 LVINAAPPF   79 (389)
T ss_pred             EEEEeCCch
Confidence            999999864

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.28  E-value=8.6e-06  Score=60.88  Aligned_cols=78  Identities=19%  Similarity=0.351  Sum_probs=59.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++++++|.|+ ||.|++++..|++.|+. |.++.|+.++++++.+++.  +..+.++.  +.+..   ....     
T Consensus         8 ~~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~--~~~~~~~~--~~~~~---~~~~-----   74 (135)
T PF01488_consen    8 GDLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG--GVNIEAIP--LEDLE---EALQ-----   74 (135)
T ss_dssp             STGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT--GCSEEEEE--GGGHC---HHHH-----
T ss_pred             CCcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC--ccccceee--HHHHH---HHHh-----
Confidence            4789999999997 89999999999999998 9999999999998888872  22344433  33322   2222     


Q ss_pred             cCCCcEEEECCCCC
Q 025259           87 YGRIDVFVLNAAVN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                        ..|++|++.+..
T Consensus        75 --~~DivI~aT~~~   86 (135)
T PF01488_consen   75 --EADIVINATPSG   86 (135)
T ss_dssp             --TESEEEE-SSTT
T ss_pred             --hCCeEEEecCCC
Confidence              699999998864

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=98.28  E-value=4.3e-06  Score=73.68  Aligned_cols=76  Identities=24%  Similarity=0.351  Sum_probs=60.6

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+|.|+ |.+|+.+++.|++.+-  +|++.+|+.+.+++..+++  .+.++....+|+.|.+++.++++       ..|+
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~l~~~~~-------~~dv   70 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL--LGDRVEAVQVDVNDPESLAELLR-------GCDV   70 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT----TTTTEEEEE--TTTHHHHHHHHT-------TSSE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc--cccceeEEEEecCCHHHHHHHHh-------cCCE
Confidence            689999 9999999999999864  7999999999988877665  45689999999999999888877       5799


Q ss_pred             EEECCCCC
Q 025259           93 FVLNAAVN  100 (255)
Q Consensus        93 lv~~ag~~  100 (255)
                      +||++|..
T Consensus        71 Vin~~gp~   78 (386)
T PF03435_consen   71 VINCAGPF   78 (386)
T ss_dssp             EEE-SSGG
T ss_pred             EEECCccc
Confidence            99999964

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=98.18  E-value=7.1e-06  Score=70.43  Aligned_cols=120  Identities=14%  Similarity=0.141  Sum_probs=73.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC-------CeEEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG-------ASVVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G-------~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      -+++||||+|.+|.+++..|+..+       ..|+++++++.  .++....++.+..   .+...|+....++..     
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~---~~~~~~~~~~~~~~~-----   74 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCA---FPLLKSVVATTDPEE-----   74 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcc---ccccCCceecCCHHH-----
Confidence            469999999999999999998844       57999999653  2222111211110   011123332222222     


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        .+...|++||+||....  +  ..+.   .+.++.|+.=.-.+.+.+.++-.+.+.++.+|...
T Consensus        75 --~l~~aDiVI~tAG~~~~--~--~~~R---~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv  131 (325)
T cd01336          75 --AFKDVDVAILVGAMPRK--E--GMER---KDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPA  131 (325)
T ss_pred             --HhCCCCEEEEeCCcCCC--C--CCCH---HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcH
Confidence              22379999999997532  1  2233   55677888766666666666644566777777644

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.17  E-value=8.4e-05  Score=57.42  Aligned_cols=186  Identities=9%  Similarity=-0.031  Sum_probs=111.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++.|.||+|..|..+++...+.|+.|+.+.|+++++...        ..+..++.|+.|++++...+.       +.|.+
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~--------~~~~i~q~Difd~~~~a~~l~-------g~DaV   66 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR--------QGVTILQKDIFDLTSLASDLA-------GHDAV   66 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc--------ccceeecccccChhhhHhhhc-------CCceE
Confidence            688999999999999999999999999999999775442        246678999999988765554       79999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccC----------CCCCChhhH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQ----------PPSAMAMYG  161 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~----------~~~~~~~y~  161 (255)
                      |...|... +.      .+.  .+..    .    .+++...++.  ..|++.|+...+..          |..+...|.
T Consensus        67 IsA~~~~~-~~------~~~--~~~k----~----~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~  129 (211)
T COG2910          67 ISAFGAGA-SD------NDE--LHSK----S----IEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKP  129 (211)
T ss_pred             EEeccCCC-CC------hhH--HHHH----H----HHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHH
Confidence            99888642 11      111  1111    1    4444444432  24778777665542          222334455


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      .+++..+. ...|..+-  .+.-.-|+|.....|-.+.. ...--.+.+.....-...++.+|-|-+++--+..
T Consensus       130 ~A~~~ae~-L~~Lr~~~--~l~WTfvSPaa~f~PGerTg-~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~  199 (211)
T COG2910         130 EALAQAEF-LDSLRAEK--SLDWTFVSPAAFFEPGERTG-NYRLGGDQLLVNAKGESRISYADYAIAVLDELEK  199 (211)
T ss_pred             HHHHHHHH-HHHHhhcc--CcceEEeCcHHhcCCccccC-ceEeccceEEEcCCCceeeeHHHHHHHHHHHHhc
Confidence            55555443 34555553  46677777865444311110 0000001111111112466778888877766644

>PRK14982 acyl-ACP reductase; Provisional

Probab=98.12  E-value=1.6e-05  Score=68.27  Aligned_cols=74  Identities=20%  Similarity=0.294  Sum_probs=55.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHc-C-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLE-G-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~-G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|+++||||+|.||+.++++|++. | ..+++++|+.+.+.....++..         .|+.   .++       +
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~---------~~i~---~l~-------~  211 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGG---------GKIL---SLE-------E  211 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhcc---------ccHH---hHH-------H
Confidence            3689999999999999999999999864 6 4799999998887776655421         2222   122       2


Q ss_pred             HcCCCcEEEECCCCC
Q 025259           86 KYGRIDVFVLNAAVN  100 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~  100 (255)
                      .+...|++|++++..
T Consensus       212 ~l~~aDiVv~~ts~~  226 (340)
T PRK14982        212 ALPEADIVVWVASMP  226 (340)
T ss_pred             HHccCCEEEECCcCC
Confidence            234799999999964

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=98.08  E-value=1.9e-05  Score=66.79  Aligned_cols=82  Identities=18%  Similarity=0.228  Sum_probs=70.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHH----cCCeEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGL----EGASVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~----~G~~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      -++|-||+|..|.-+++.+.+    .|....+.+|+++++++....+.+..    ....++.||.+|++++.++++    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            479999999999999999998    78889999999999999988887653    233388999999999998887    


Q ss_pred             HcCCCcEEEECCCCCCC
Q 025259           86 KYGRIDVFVLNAAVNPY  102 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~  102 (255)
                         ...+++||+|....
T Consensus        83 ---~~~vivN~vGPyR~   96 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYRF   96 (423)
T ss_pred             ---hhEEEEecccccee
Confidence               47899999997653

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=98.07  E-value=2.5e-05  Score=62.52  Aligned_cols=212  Identities=21%  Similarity=0.278  Sum_probs=127.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc-CCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE-GAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +-+..++||||+-|-+|..+|..|... |-. |++.+.-.+...-     -+.|   -++-.|+.|...+++++-.    
T Consensus        41 ~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V-----~~~G---PyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   41 TQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV-----TDVG---PYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             cCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh-----cccC---CchhhhhhccccHHHhhcc----
Confidence            445779999999999999999999764 765 7777765544211     1112   2345788887776665442    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC------C------
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP------P------  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~------~------  154 (255)
                       .++|-+||-.+..+..+      +...--..++|+.|.-++++.+..+-.   ++..=|.+.+..|      .      
T Consensus       109 -~RIdWL~HfSALLSAvG------E~NVpLA~~VNI~GvHNil~vAa~~kL---~iFVPSTIGAFGPtSPRNPTPdltIQ  178 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAVG------ETNVPLALQVNIRGVHNILQVAAKHKL---KVFVPSTIGAFGPTSPRNPTPDLTIQ  178 (366)
T ss_pred             -cccceeeeHHHHHHHhc------ccCCceeeeecchhhhHHHHHHHHcCe---eEeecccccccCCCCCCCCCCCeeee
Confidence             37999999766432111      111223378999999999998887632   2333333333322      2      


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEE-eCCccc--------ChhhhhhcCCHHHHHHhhcc---CCC-----C
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV-APGFVP--------THFAQALLGNDAVRKALEGK---TLL-----N  217 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v-~pg~v~--------t~~~~~~~~~~~~~~~~~~~---~~~-----~  217 (255)
                      .+...|+.||.-.+-+...+...++  +.+-+. .||.+.        |+..-     ..+.+...+.   .++     .
T Consensus       179 RPRTIYGVSKVHAEL~GEy~~hrFg--~dfr~~rfPg~is~~~pgggttdya~-----A~f~~Al~~gk~tCylrpdtrl  251 (366)
T KOG2774|consen  179 RPRTIYGVSKVHAELLGEYFNHRFG--VDFRSMRFPGIISATKPGGGTTDYAI-----AIFYDALQKGKHTCYLRPDTRL  251 (366)
T ss_pred             cCceeechhHHHHHHHHHHHHhhcC--ccceecccCcccccCCCCCCcchhHH-----HHHHHHHHcCCcccccCCCccC
Confidence            3567899999999999988887774  322222 244332        22211     1122222211   111     2


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      .++.-+|+-..++.++...+..+--.++++.|
T Consensus       252 pmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  252 PMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             ceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            34556777777777666666666666666654

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.93  E-value=0.00014  Score=62.28  Aligned_cols=152  Identities=11%  Similarity=0.038  Sum_probs=101.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCChhH--HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQKN--VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .++|.|+|++|.+|.+++..|+..|.       .++++|.++..  ++....++.+....... ...++. ..    .+ 
T Consensus         2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~----~~-   74 (322)
T cd01338           2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLA-EIVITD-DP----NV-   74 (322)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccC-ceEEec-Cc----HH-
Confidence            56899999999999999999998775       69999996543  55555555443200000 001111 00    11 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc--------C-C
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY--------Q-P  153 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~--------~-~  153 (255)
                         .+...|++|.+||...  ++  ..+   -.+.+..|+.=.-.+.+.+.++-.+.+.++.+|.....        . +
T Consensus        75 ---~~~daDivvitaG~~~--k~--g~t---R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~  144 (322)
T cd01338          75 ---AFKDADWALLVGAKPR--GP--GME---RADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPD  144 (322)
T ss_pred             ---HhCCCCEEEEeCCCCC--CC--CCc---HHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCC
Confidence               2237999999999743  22  223   34458888877777777776664346778888765432        3 2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP  180 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~  180 (255)
                      .|....|+.++.--..|...++..++.
T Consensus       145 ~p~~~ViG~t~LDs~Rl~~~la~~lgv  171 (322)
T cd01338         145 IPPDNFTAMTRLDHNRAKSQLAKKAGV  171 (322)
T ss_pred             CChHheEEehHHHHHHHHHHHHHHhCc
Confidence            667778999999999999999999863

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.92  E-value=2.7e-05  Score=69.90  Aligned_cols=79  Identities=24%  Similarity=0.305  Sum_probs=55.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++|||+++ +|.++++.|++.|+.|++.+++........+++...+.++.  ...  ++..+   .+      .
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~g~~~~--~~~--~~~~~---~~------~   67 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEEGIKVI--CGS--HPLEL---LD------E   67 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhcCCEEE--eCC--CCHHH---hc------C
Confidence            47899999999987 99999999999999999999876544444455665554432  111  11111   11      1


Q ss_pred             CCcEEEECCCCCC
Q 025259           89 RIDVFVLNAAVNP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      .+|.+|+++|+..
T Consensus        68 ~~d~vV~s~gi~~   80 (447)
T PRK02472         68 DFDLMVKNPGIPY   80 (447)
T ss_pred             cCCEEEECCCCCC
Confidence            4899999999753

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.92  E-value=4.3e-05  Score=58.59  Aligned_cols=157  Identities=17%  Similarity=0.103  Sum_probs=98.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++++.++|.||+|-.|..+.+++++.+-  .|+++.|.+....++       +..+.....|+...++   .+...   
T Consensus        15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at-------~k~v~q~~vDf~Kl~~---~a~~~---   81 (238)
T KOG4039|consen   15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT-------DKVVAQVEVDFSKLSQ---LATNE---   81 (238)
T ss_pred             hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc-------cceeeeEEechHHHHH---HHhhh---
Confidence            46789999999999999999999999873  499999985332222       2345555666655433   33322   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                       -.+|+++++-|.......        .+-.+++.-.=.+.+.|.+..--.  ..++.+||..+....  ...|--.|.-
T Consensus        82 -qg~dV~FcaLgTTRgkaG--------adgfykvDhDyvl~~A~~AKe~Gc--k~fvLvSS~GAd~sS--rFlY~k~KGE  148 (238)
T KOG4039|consen   82 -QGPDVLFCALGTTRGKAG--------ADGFYKVDHDYVLQLAQAAKEKGC--KTFVLVSSAGADPSS--RFLYMKMKGE  148 (238)
T ss_pred             -cCCceEEEeecccccccc--------cCceEeechHHHHHHHHHHHhCCC--eEEEEEeccCCCccc--ceeeeeccch
Confidence             389999999987541111        111122222223334444443221  268889887665443  5568888877


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                      ++.=+-.|-.+     ++....||++..+.
T Consensus       149 vE~~v~eL~F~-----~~~i~RPG~ll~~R  173 (238)
T KOG4039|consen  149 VERDVIELDFK-----HIIILRPGPLLGER  173 (238)
T ss_pred             hhhhhhhcccc-----EEEEecCcceeccc
Confidence            76655444333     78889999886543

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.91  E-value=0.00015  Score=61.38  Aligned_cols=80  Identities=15%  Similarity=0.269  Sum_probs=56.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++++|+|+++++|.++++.+...|++|+.++++++..+..    ...+.+.   .+|..+++..+.+.+...  ..++
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  214 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV----RQAGADA---VFNYRAEDLADRILAATA--GQGV  214 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EEeCCCcCHHHHHHHHcC--CCce
Confidence            589999999999999999999999999999999987665444    2234322   234455444444332221  1369


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |.+++++|.
T Consensus       215 d~vi~~~~~  223 (325)
T cd08253         215 DVIIEVLAN  223 (325)
T ss_pred             EEEEECCch
Confidence            999999873

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.87  E-value=0.00011  Score=55.95  Aligned_cols=77  Identities=22%  Similarity=0.312  Sum_probs=56.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++++++|+|+ |++|.++++.|++.| ..|++++|+.+..++..+++....     +..+..+.++.          .
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~~----------~   79 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-----IAIAYLDLEEL----------L   79 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-----cceeecchhhc----------c
Confidence            467899999998 899999999999986 679999999888877766654321     12333333322          2


Q ss_pred             CCCcEEEECCCCCC
Q 025259           88 GRIDVFVLNAAVNP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|++|++.+...
T Consensus        80 ~~~Dvvi~~~~~~~   93 (155)
T cd01065          80 AEADLIINTTPVGM   93 (155)
T ss_pred             ccCCEEEeCcCCCC
Confidence            47999999998653

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.84  E-value=0.00012  Score=61.67  Aligned_cols=76  Identities=18%  Similarity=0.274  Sum_probs=56.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|+..| .+|++++|+.++.+++.+++.... .+   ..++    ...       +..
T Consensus       120 ~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~-~~---~~~~----~~~-------~~~  183 (278)
T PRK00258        120 DLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALG-KA---ELDL----ELQ-------EEL  183 (278)
T ss_pred             CCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcc-ce---eecc----cch-------hcc
Confidence            578999999997 899999999999999 679999999998888877764321 11   1111    111       112


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       184 ~~~DivInaTp~g  196 (278)
T PRK00258        184 ADFDLIINATSAG  196 (278)
T ss_pred             ccCCEEEECCcCC
Confidence            3689999998764

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.82  E-value=0.00047  Score=58.99  Aligned_cols=105  Identities=20%  Similarity=0.360  Sum_probs=72.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..+++++|+|+++++|.++++.+...|++|++++++++..+.+    ...+..   ...|..+.+..+.+.+....  .+
T Consensus       165 ~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~  235 (342)
T cd08266         165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA----KELGAD---YVIDYRKEDFVREVRELTGK--RG  235 (342)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCC---eEEecCChHHHHHHHHHhCC--CC
Confidence            3588999999999999999999999999999999988765543    222322   12456665555555443321  36


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +|++++++|..            .++.               ..+.+++.|+++.+++...
T Consensus       236 ~d~~i~~~g~~------------~~~~---------------~~~~l~~~G~~v~~~~~~~  269 (342)
T cd08266         236 VDVVVEHVGAA------------TWEK---------------SLKSLARGGRLVTCGATTG  269 (342)
T ss_pred             CcEEEECCcHH------------HHHH---------------HHHHhhcCCEEEEEecCCC
Confidence            99999998831            1222               2234567799999987654

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.78  E-value=0.00068  Score=57.23  Aligned_cols=42  Identities=19%  Similarity=0.364  Sum_probs=37.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK   51 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~   51 (255)
                      ++++++++|.|. |++|+++++.|...|++|++++|+++..+.
T Consensus       148 ~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~  189 (287)
T TIGR02853       148 TIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLAR  189 (287)
T ss_pred             CCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence            688999999999 569999999999999999999999865443

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=97.76  E-value=0.0011  Score=49.94  Aligned_cols=114  Identities=15%  Similarity=0.154  Sum_probs=78.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++.|+|++|.+|.+++..|...+.  +++++|++++.++....++++.   ...-..+..  .+.+.           +.
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~-----------~~   68 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA-----------LK   68 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG-----------GT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc-----------cc
Confidence            688999999999999999998864  5999999998888888887664   222222222  22222           12


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..|++|..+|...  .+  ..+   -.+.++.|..-.-.+.+.+.++- +.+.++.++..
T Consensus        69 ~aDivvitag~~~--~~--g~s---R~~ll~~N~~i~~~~~~~i~~~~-p~~~vivvtNP  120 (141)
T PF00056_consen   69 DADIVVITAGVPR--KP--GMS---RLDLLEANAKIVKEIAKKIAKYA-PDAIVIVVTNP  120 (141)
T ss_dssp             TESEEEETTSTSS--ST--TSS---HHHHHHHHHHHHHHHHHHHHHHS-TTSEEEE-SSS
T ss_pred             cccEEEEeccccc--cc--ccc---HHHHHHHhHhHHHHHHHHHHHhC-CccEEEEeCCc
Confidence            6999999999743  21  123   44557888877777777777664 56677777654

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.76  E-value=0.00023  Score=59.60  Aligned_cols=75  Identities=16%  Similarity=0.268  Sum_probs=56.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++|+++|+|+ ||+|++++..|++.|+.|.+++|+.++.+++.+++...+. ......|     .   .      ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~-~~~~~~~-----~---~------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGE-IQAFSMD-----E---L------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCc-eEEechh-----h---h------cccC
Confidence            46899999998 6999999999999999999999999888888877755432 2221111     1   0      1236


Q ss_pred             CcEEEECCCCC
Q 025259           90 IDVFVLNAAVN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|++||+.+..
T Consensus       179 ~DivInatp~g  189 (270)
T TIGR00507       179 VDLIINATSAG  189 (270)
T ss_pred             ccEEEECCCCC
Confidence            89999999864

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>cd00704 MDH Malate dehydrogenase

Probab=97.73  E-value=0.0004  Score=59.58  Aligned_cols=115  Identities=13%  Similarity=0.105  Sum_probs=73.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHH--HH--HHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQH--RK--NLI   80 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~--~~--~~~   80 (255)
                      ++.||||+|.+|..++..|+..|.       .++++|+++  +.++.              ...|+.+...  ..  ...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g--------------~~~Dl~d~~~~~~~~~~i~   67 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEG--------------VVMELQDCAFPLLKGVVIT   67 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccce--------------eeeehhhhcccccCCcEEe
Confidence            689999999999999999997652       499999987  43333              2333333210  00  000


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ....+.+...|++|+.||...  .+  ..+   -.+.+..|+.-.-.+.+.+.++-.+.+.++.+|...
T Consensus        68 ~~~~~~~~~aDiVVitAG~~~--~~--g~t---R~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPv  129 (323)
T cd00704          68 TDPEEAFKDVDVAILVGAFPR--KP--GME---RADLLRKNAKIFKEQGEALNKVAKPTVKVLVVGNPA  129 (323)
T ss_pred             cChHHHhCCCCEEEEeCCCCC--Cc--CCc---HHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeCCcH
Confidence            111223347999999999743  22  123   455688888777777777776643566777777544

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.72  E-value=0.00048  Score=60.32  Aligned_cols=76  Identities=16%  Similarity=0.162  Sum_probs=55.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +.+++++|.|+ |.+|+..++.+...|++|++++|+.+.++.....+   +..   +..+..+++.+.+.+       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~---g~~---v~~~~~~~~~l~~~l-------~~  230 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF---GGR---IHTRYSNAYEIEDAV-------KR  230 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc---Cce---eEeccCCHHHHHHHH-------cc
Confidence            67788999987 78999999999999999999999987765543322   221   223445555544433       36


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      .|++|++++.
T Consensus       231 aDvVI~a~~~  240 (370)
T TIGR00518       231 ADLLIGAVLI  240 (370)
T ss_pred             CCEEEEcccc
Confidence            8999999865

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.71  E-value=0.00037  Score=59.80  Aligned_cols=117  Identities=15%  Similarity=0.103  Sum_probs=74.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH-HH-HH--HHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH-RK-NL--IDK   82 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~-~~--~~~   82 (255)
                      ++.|+|++|.+|.+++..|+..|.       .++++|++++..            .......|+.|... .. ..  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~------------~a~g~~~Dl~d~~~~~~~~~~~~~~   68 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK------------VLEGVVMELMDCAFPLLDGVVPTHD   68 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc------------ccceeEeehhcccchhcCceeccCC
Confidence            478999999999999999998554       499999975430            11223344444331 10 00  001


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..+.+...|++|++||...  .+     .+++.+.+..|+.=.-.+.+.+.++-.+.+.++.+|...
T Consensus        69 ~~~~~~~aDiVVitAG~~~--~~-----~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvsNPv  128 (324)
T TIGR01758        69 PAVAFTDVDVAILVGAFPR--KE-----GMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVGNPA  128 (324)
T ss_pred             hHHHhCCCCEEEEcCCCCC--CC-----CCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence            1233447999999999743  11     123567788888877777777777643566777777544

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=97.68  E-value=0.0012  Score=56.53  Aligned_cols=118  Identities=14%  Similarity=0.078  Sum_probs=81.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +-+++++.|+|+ |.+|.+++..|+..|.  .++++|++++.++....++++..   .++.. ..  .+.       +. 
T Consensus         3 ~~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~-------~~-   70 (315)
T PRK00066          3 KKQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDY-------SD-   70 (315)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCH-------HH-
Confidence            345789999998 9999999999999886  59999999998888888887642   12222 11  121       11 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                         +...|++|..||...  ++  ..+.   .+.+..|..-...+.+.+.++- +.+.+++++...
T Consensus        71 ---~~~adivIitag~~~--k~--g~~R---~dll~~N~~i~~~i~~~i~~~~-~~~~vivvsNP~  125 (315)
T PRK00066         71 ---CKDADLVVITAGAPQ--KP--GETR---LDLVEKNLKIFKSIVGEVMASG-FDGIFLVASNPV  125 (315)
T ss_pred             ---hCCCCEEEEecCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCcH
Confidence               237999999999743  22  2233   3457777776666666666543 356777777544

>PRK14968 putative methyltransferase; Provisional

Probab=97.67  E-value=0.00082  Score=52.74  Aligned_cols=122  Identities=17%  Similarity=0.153  Sum_probs=77.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCe---EEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|-.|++.|.   ++..+++.+.+|+.++++++.++...+.+...+.+   +.++.+|+.+.         +.+ 
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~-   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAVECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG-   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHHHHHHHHHHHcCCCCcceEEEecccccc---------ccc-
Confidence            468899999977776   55666666889999999998888877777655432   77888887542         111 


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHH---HHHHHHHHHhcccCCCeEEEEcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS---SILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~---~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                       ..+|.++.|..... ..+.... .+.+...+.....+   .-.+++.+.+.|+++|.++++.+
T Consensus        89 -~~~d~vi~n~p~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~gG~~~~~~~  149 (188)
T PRK14968         89 -DKFDVILFNPPYLP-TEEEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKPGGRILLLQS  149 (188)
T ss_pred             -cCceEEEECCCcCC-CCchhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCCCeEEEEEEc
Confidence             26999999887643 2222111 11222222222222   23456777788888888776643

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=97.60  E-value=9.9e-05  Score=58.95  Aligned_cols=48  Identities=27%  Similarity=0.425  Sum_probs=42.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK   55 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~   55 (255)
                      ..+++||+++|+|.+ .+|+.+++.|.+.|++|++++++++.+++..+.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~   70 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINEEAVARAAEL   70 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH
Confidence            457899999999996 899999999999999999999998777666554

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=97.60  E-value=0.0019  Score=55.14  Aligned_cols=115  Identities=14%  Similarity=0.101  Sum_probs=78.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++.|.|+ |++|++++..|+..|  ..|++++++++..+....++++.    +...... .  .+.+.           
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-----------   65 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-A--GDYSD-----------   65 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-c--CCHHH-----------
Confidence            46889996 899999999999999  47999999999888888877653    1122221 1  22211           


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +...|++|+++|...  ++  ..+.   .+.++.|..=...+.+.+.++- +.+.++++|....
T Consensus        66 l~~aDIVIitag~~~--~~--g~~R---~dll~~N~~i~~~~~~~i~~~~-~~~~vivvsNP~d  121 (306)
T cd05291          66 CKDADIVVITAGAPQ--KP--GETR---LDLLEKNAKIMKSIVPKIKASG-FDGIFLVASNPVD  121 (306)
T ss_pred             hCCCCEEEEccCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecChHH
Confidence            137999999999743  22  2233   4557777777666777666643 4667888876543

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=97.59  E-value=0.0011  Score=55.81  Aligned_cols=77  Identities=16%  Similarity=0.044  Sum_probs=55.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|++++|+.++.+.+.+++........+..  .   +++..       ..
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~--~---~~~~~-------~~  190 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATA--G---SDLAA-------AL  190 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEe--c---cchHh-------hh
Confidence            467899999997 6799999999999998 599999999999988888865432222221  1   11111       12


Q ss_pred             CCCcEEEECCC
Q 025259           88 GRIDVFVLNAA   98 (255)
Q Consensus        88 g~~d~lv~~ag   98 (255)
                      ...|++||+..
T Consensus       191 ~~aDiVInaTp  201 (284)
T PRK12549        191 AAADGLVHATP  201 (284)
T ss_pred             CCCCEEEECCc
Confidence            36899999953

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.56  E-value=0.0014  Score=69.74  Aligned_cols=177  Identities=21%  Similarity=0.161  Sum_probs=112.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.++.++|++.+++++.+++.+|.++|+.|+.+...+.. .   ......+..+-.+...-.++.++..+++.+....+
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1827 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSPWVV-S---HSASPLASAIASVTLGTIDDTSIEAVIKDIEEKTA 1827 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeeccccc-c---ccccccccccccccccccchHHHHHHHHhhhcccc
Confidence            3558889999889999999999999999998876432210 0   00000111122233444567788888888877778


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY------  160 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y------  160 (255)
                      .++.+||..+.......  ..+...+...-..-+...|.+.|.+.+.+.  .+..++.++...+..++.+....      
T Consensus      1828 ~~~g~i~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G~~g~~~~~~~~~~~~~ 1905 (2582)
T TIGR02813      1828 QIDGFIHLQPQHKSVAD--KVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDGGFGYSNGDADSGTQQV 1905 (2582)
T ss_pred             ccceEEEeccccccccc--cccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCCccccCCcccccccccc
Confidence            89999998886431010  000001112222444556777777766543  34578888888776665433222      


Q ss_pred             --HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCc
Q 025259          161 --GVTKTALLGLTKALAAEMAP-DTRVNCVAPGF  191 (255)
Q Consensus       161 --~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~  191 (255)
                        ....+++.+|+|+++.|+.. ..|...+.|..
T Consensus      1906 ~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~~ 1939 (2582)
T TIGR02813      1906 KAELNQAALAGLTKTLNHEWNAVFCRALDLAPKL 1939 (2582)
T ss_pred             ccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCCc
Confidence              34589999999999999976 67788887753

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=97.56  E-value=0.00031  Score=59.17  Aligned_cols=79  Identities=20%  Similarity=0.162  Sum_probs=64.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +...++|-||+|..|.-++++|+++|.+-.+.+|+.+++..+.+.+   |.+...+++.+  +..+++..+       ..
T Consensus         5 ~e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L---G~~~~~~p~~~--p~~~~~~~~-------~~   72 (382)
T COG3268           5 REYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL---GPEAAVFPLGV--PAALEAMAS-------RT   72 (382)
T ss_pred             cceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc---CccccccCCCC--HHHHHHHHh-------cc
Confidence            3567899999999999999999999999999999999999888776   44455555544  666665555       69


Q ss_pred             cEEEECCCCCC
Q 025259           91 DVFVLNAAVNP  101 (255)
Q Consensus        91 d~lv~~ag~~~  101 (255)
                      ++|+||+|...
T Consensus        73 ~VVlncvGPyt   83 (382)
T COG3268          73 QVVLNCVGPYT   83 (382)
T ss_pred             eEEEecccccc
Confidence            99999999764

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=97.53  E-value=0.0011  Score=57.12  Aligned_cols=103  Identities=20%  Similarity=0.278  Sum_probs=66.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++|+|++|++|..++......|++|+.+.+++++.+.+.+.   .|.+..   .|..+.+...+.+.+...  +++
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~---lGa~~v---i~~~~~~~~~~~i~~~~~--~gv  222 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNK---LGFDDA---FNYKEEPDLDAALKRYFP--NGI  222 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHh---cCCcee---EEcCCcccHHHHHHHhCC--CCc
Confidence            588999999999999999987778899999989888765554432   343222   222222222222232211  368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |+++.+.|. .                          ..+.....+++.|+++.++..
T Consensus       223 d~v~d~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~  253 (338)
T cd08295         223 DIYFDNVGG-K--------------------------MLDAVLLNMNLHGRIAACGMI  253 (338)
T ss_pred             EEEEECCCH-H--------------------------HHHHHHHHhccCcEEEEeccc
Confidence            999998873 1                          112334556778899988754

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=97.52  E-value=0.00038  Score=54.74  Aligned_cols=78  Identities=23%  Similarity=0.309  Sum_probs=47.5

Q ss_pred             CCCCEEEEeCCC----------------CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259           10 FQGKVAVVTAST----------------QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus        10 l~~k~vlVtG~~----------------~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      |+||+||||+|.                |..|.++|+.++..|+.|+++..... ++.        ...+..+  ++.+-
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~~--------p~~~~~i--~v~sa   69 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LPP--------PPGVKVI--RVESA   69 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS-------------TTEEEE--E-SSH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-ccc--------cccceEE--Eecch
Confidence            579999999874                57899999999999999998877642 111        1123333  34555


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      +++.+.+.   +.+...|++|++|++..
T Consensus        70 ~em~~~~~---~~~~~~Di~I~aAAVsD   94 (185)
T PF04127_consen   70 EEMLEAVK---ELLPSADIIIMAAAVSD   94 (185)
T ss_dssp             HHHHHHHH---HHGGGGSEEEE-SB--S
T ss_pred             hhhhhhhc---cccCcceeEEEecchhh
Confidence            55444444   44556799999999875

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=97.49  E-value=0.0024  Score=54.49  Aligned_cols=75  Identities=24%  Similarity=0.352  Sum_probs=51.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|+|+++++|.++++.+...|++|+.+.++.+..+..    ...+.+.. +  |..   ...+.+.    ...++
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~~~~~~-~--~~~---~~~~~~~----~~~~~  227 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL----KELGADYV-I--DGS---KFSEDVK----KLGGA  227 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH----HHcCCcEE-E--ecH---HHHHHHH----hccCC
Confidence            478999999999999999999999999999988887654443    33333211 1  221   1222222    22379


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |++++++|.
T Consensus       228 d~v~~~~g~  236 (332)
T cd08259         228 DVVIELVGS  236 (332)
T ss_pred             CEEEECCCh
Confidence            999999874

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=97.49  E-value=0.0012  Score=57.14  Aligned_cols=82  Identities=18%  Similarity=0.370  Sum_probs=59.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh---------------------hHHHHHHHHHHHcC--CeE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ---------------------KNVDKAVEKLKALG--IEV   63 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~--~~~   63 (255)
                      .+|++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                     .+.+.+.+.+++.+  .++
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i   98 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEI   98 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEE
Confidence            4688999999997 6799999999999998 588898863                     24455556666653  456


Q ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           64 IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        64 ~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+..|++ ++.+++++       ...|++|.+..
T Consensus        99 ~~~~~~~~-~~~~~~~~-------~~~DlVid~~D  125 (338)
T PRK12475         99 VPVVTDVT-VEELEELV-------KEVDLIIDATD  125 (338)
T ss_pred             EEEeccCC-HHHHHHHh-------cCCCEEEEcCC
Confidence            66667775 33444443       26898888765

>PRK06849 hypothetical protein; Provisional

Probab=97.48  E-value=0.0014  Score=57.77  Aligned_cols=83  Identities=12%  Similarity=0.139  Sum_probs=56.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.++|||||++..+|.++++.|.+.|++|++++.+..........+    ...+.++..-.+++...+.+.++.++. ++
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~----d~~~~~p~p~~d~~~~~~~L~~i~~~~-~i   77 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAV----DGFYTIPSPRWDPDAYIQALLSIVQRE-NI   77 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhh----hheEEeCCCCCCHHHHHHHHHHHHHHc-CC
Confidence            3689999999999999999999999999999999875543322222    223333323345554444444555543 58


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |++|-...
T Consensus        78 d~vIP~~e   85 (389)
T PRK06849         78 DLLIPTCE   85 (389)
T ss_pred             CEEEECCh
Confidence            99998775

>PRK05086 malate dehydrogenase; Provisional

Probab=97.47  E-value=0.00095  Score=57.07  Aligned_cols=118  Identities=15%  Similarity=0.150  Sum_probs=70.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-c--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGL-E--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~-~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++++|.||+|++|.+++..++. .  +..++++++++. .+...-++.+.+ ....+.+  .+.+++.       +.+..
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~-~~g~alDl~~~~-~~~~i~~--~~~~d~~-------~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPV-TPGVAVDLSHIP-TAVKIKG--FSGEDPT-------PALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCC-CcceehhhhcCC-CCceEEE--eCCCCHH-------HHcCC
Confidence            4789999999999999998865 2  446888898753 222112232211 1112222  1111111       11236


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .|++|.++|....+    ..+   -.+.+..|....-.+.+.+.++- ++..|+.+|...
T Consensus        70 ~DiVIitaG~~~~~----~~~---R~dll~~N~~i~~~ii~~i~~~~-~~~ivivvsNP~  121 (312)
T PRK05086         70 ADVVLISAGVARKP----GMD---RSDLFNVNAGIVKNLVEKVAKTC-PKACIGIITNPV  121 (312)
T ss_pred             CCEEEEcCCCCCCC----CCC---HHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccCch
Confidence            99999999974321    122   44558888888888888887762 344555555544

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=97.44  E-value=0.0031  Score=52.55  Aligned_cols=145  Identities=12%  Similarity=0.155  Sum_probs=83.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh-------------------hHHHHHHHHHHHcCCeEEEE
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ-------------------KNVDKAVEKLKALGIEVIGI   66 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~~~~~~~   66 (255)
                      ..+|++.+|+|.|+ ||+|..+++.|++.|. ++.++|.+.                   .+.+.+.+.+.+.++.+.+.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~INP~~~V~  103 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVT  103 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhHCCCcEEE
Confidence            35688999999975 5999999999999995 588887652                   12234444454444333322


Q ss_pred             Ee-cCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           67 IC-HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        67 ~~-D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .. +.-+++..+.++.      ..+|++|.+.....                      .-..+.+.+..+   +-.+|..
T Consensus       104 ~i~~~i~~e~~~~ll~------~~~D~VIdaiD~~~----------------------~k~~L~~~c~~~---~ip~I~~  152 (268)
T PRK15116        104 VVDDFITPDNVAEYMS------AGFSYVIDAIDSVR----------------------PKAALIAYCRRN---KIPLVTT  152 (268)
T ss_pred             EEecccChhhHHHHhc------CCCCEEEEcCCCHH----------------------HHHHHHHHHHHc---CCCEEEE
Confidence            22 2223344333331      25777777766321                      112233334332   1235555


Q ss_pred             cCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC--CcE
Q 025259          146 SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP--DTR  183 (255)
Q Consensus       146 ss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~--~i~  183 (255)
                      ....+.......-.-..+|.....|++.+++++..  ||+
T Consensus       153 gGag~k~dp~~~~~~di~~t~~~pla~~~R~~lr~~~~~~  192 (268)
T PRK15116        153 GGAGGQIDPTQIQVVDLAKTIQDPLAAKLRERLKSDFGVV  192 (268)
T ss_pred             CCcccCCCCCeEEEEeeecccCChHHHHHHHHHHHhhCCC
Confidence            44444333222334556777788999999999875  554

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=97.41  E-value=0.0058  Score=55.49  Aligned_cols=113  Identities=18%  Similarity=0.253  Sum_probs=74.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-------------HHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-------------EQH   75 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-------------~~~   75 (255)
                      ...+.+++|+|+ |.+|...+......|+.|+++|++++.++..    ++.|.+...+  |..+             .+.
T Consensus       162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a----eslGA~~v~i--~~~e~~~~~~gya~~~s~~~  234 (509)
T PRK09424        162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV----ESMGAEFLEL--DFEEEGGSGDGYAKVMSEEF  234 (509)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCeEEEe--ccccccccccchhhhcchhH
Confidence            346889999986 6899999999999999999999998876543    3346554322  2221             122


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .++..+.+.+..+..|++|.++|......                    +..+.+..+..|++++.||.++..
T Consensus       235 ~~~~~~~~~~~~~gaDVVIetag~pg~~a--------------------P~lit~~~v~~mkpGgvIVdvg~~  287 (509)
T PRK09424        235 IKAEMALFAEQAKEVDIIITTALIPGKPA--------------------PKLITAEMVASMKPGSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHHHhccCCCCEEEECCCCCcccC--------------------cchHHHHHHHhcCCCCEEEEEccC
Confidence            22222222333357999999999743111                    223346677788888899888763

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=97.40  E-value=0.0016  Score=52.16  Aligned_cols=83  Identities=20%  Similarity=0.332  Sum_probs=57.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC-------------------hhHHHHHHHHHHHcCC--eEE
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK-------------------QKNVDKAVEKLKALGI--EVI   64 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~~~   64 (255)
                      ..+|++++|+|.| .||+|.++++.|+..|. ++.++|.+                   ..+.+.+.+.+++.+.  ++.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~   94 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVT   94 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEE
Confidence            4578999999998 67999999999999998 59999887                   2345556666666543  444


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           65 GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        65 ~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+...+. ++.+..++       ...|++|.+..
T Consensus        95 ~~~~~i~-~~~~~~~~-------~~~D~Vi~~~d  120 (202)
T TIGR02356        95 ALKERVT-AENLELLI-------NNVDLVLDCTD  120 (202)
T ss_pred             EehhcCC-HHHHHHHH-------hCCCEEEECCC
Confidence            4444443 33333332       36899888765

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=97.40  E-value=0.011  Score=50.10  Aligned_cols=96  Identities=20%  Similarity=0.357  Sum_probs=64.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++.+++++|.|. |++|+.++..|...|++|.+++|+.+..+.    .+..+.+.  +  +   .+.       +.+...
T Consensus       149 ~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~----~~~~G~~~--~--~---~~~-------l~~~l~  209 (296)
T PRK08306        149 TIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLAR----ITEMGLSP--F--H---LSE-------LAEEVG  209 (296)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHH----HHHcCCee--e--c---HHH-------HHHHhC
Confidence            568999999997 679999999999999999999999765332    23334322  1  1   112       222234


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|++|++....                          .+.+..+..|+++..||.+++..
T Consensus       210 ~aDiVI~t~p~~--------------------------~i~~~~l~~~~~g~vIIDla~~p  244 (296)
T PRK08306        210 KIDIIFNTIPAL--------------------------VLTKEVLSKMPPEALIIDLASKP  244 (296)
T ss_pred             CCCEEEECCChh--------------------------hhhHHHHHcCCCCcEEEEEccCC
Confidence            799999975310                          12334456677777888888764

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=97.39  E-value=0.0034  Score=51.26  Aligned_cols=150  Identities=16%  Similarity=0.206  Sum_probs=88.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcCC--eEE
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALGI--EVI   64 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~   64 (255)
                      ..+|++.+|+|.|. ||+|..+++.|++.|.. ++++|.+.                   .+.+.+.+.+.+.++  ++.
T Consensus         6 ~~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~inP~~~V~   84 (231)
T cd00755           6 LEKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDINPECEVD   84 (231)
T ss_pred             HHHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHHCCCcEEE
Confidence            35788999999976 58999999999999985 88887642                   233444555555543  344


Q ss_pred             EEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           65 GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        65 ~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      .+...++ ++....++.      ..+|++|.+.....                      .-..+.+.+...   +-.+|.
T Consensus        85 ~~~~~i~-~~~~~~l~~------~~~D~VvdaiD~~~----------------------~k~~L~~~c~~~---~ip~I~  132 (231)
T cd00755          85 AVEEFLT-PDNSEDLLG------GDPDFVVDAIDSIR----------------------AKVALIAYCRKR---KIPVIS  132 (231)
T ss_pred             EeeeecC-HhHHHHHhc------CCCCEEEEcCCCHH----------------------HHHHHHHHHHHh---CCCEEE
Confidence            4444443 333333332      25888887765311                      112233444332   123444


Q ss_pred             EcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcE--EEEEeC
Q 025259          145 ISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR--VNCVAP  189 (255)
Q Consensus       145 vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~--v~~v~p  189 (255)
                      ..+............-..+|.-...|++.+++++.. +++  +-+|+-
T Consensus       133 s~g~g~~~dp~~i~i~di~~t~~~pla~~~R~~Lrk~~~~~~~~~v~S  180 (231)
T cd00755         133 SMGAGGKLDPTRIRVADISKTSGDPLARKVRKRLRKRGIFFGVPVVYS  180 (231)
T ss_pred             EeCCcCCCCCCeEEEccEeccccCcHHHHHHHHHHHcCCCCCeEEEeC
Confidence            444333332222344456677778999999999987 774  555543

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=97.39  E-value=0.0047  Score=50.85  Aligned_cols=104  Identities=21%  Similarity=0.326  Sum_probs=69.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++++|+|+++ +|.++++.+...|.+|++++++++..+..    +..+....   .|..+.+....+.   ....+.
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~---~~~~~~  201 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELA----KELGADHV---IDYKEEDLEEELR---LTGGGG  201 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCCcee---ccCCcCCHHHHHH---HhcCCC
Confidence            4688999999999 99999998888999999999987664443    22332221   2333333333332   122347


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +|+++++++..                          ...+.....+++.|+++.++....
T Consensus       202 ~d~vi~~~~~~--------------------------~~~~~~~~~l~~~G~~v~~~~~~~  236 (271)
T cd05188         202 ADVVIDAVGGP--------------------------ETLAQALRLLRPGGRIVVVGGTSG  236 (271)
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHhcccCCEEEEEccCCC
Confidence            99999998741                          134445566677899998887643

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=97.37  E-value=0.0039  Score=52.51  Aligned_cols=80  Identities=15%  Similarity=0.198  Sum_probs=56.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++|+++|.|+ ||-+++++..|++.|+. |.+++|+.++.+++.+.+... +.... ...+   ...+....      
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~---~~~~~~~~------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVD---ARGIEDVI------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecC---HhHHHHHH------
Confidence            467899999998 89999999999999974 899999999988888777543 22211 1122   11111111      


Q ss_pred             cCCCcEEEECCCCC
Q 025259           87 YGRIDVFVLNAAVN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                       ...|++||+....
T Consensus       193 -~~~divINaTp~G  205 (283)
T PRK14027        193 -AAADGVVNATPMG  205 (283)
T ss_pred             -hhcCEEEEcCCCC
Confidence             2589999987654

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.36  E-value=0.0013  Score=55.40  Aligned_cols=79  Identities=13%  Similarity=0.207  Sum_probs=55.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|.|+ ||.+++++.+|++.|+. |.++.|+.++.+++.+++.... .+..    +...+++       .+..
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~-~~~~----~~~~~~~-------~~~~  188 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVG-VITR----LEGDSGG-------LAIE  188 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcC-ccee----ccchhhh-------hhcc
Confidence            467899999976 89999999999999974 9999999998888877764331 1111    1111111       1122


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       189 ~~~DiVInaTp~g  201 (282)
T TIGR01809       189 KAAEVLVSTVPAD  201 (282)
T ss_pred             cCCCEEEECCCCC
Confidence            4689999998764

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.36  E-value=0.0012  Score=56.82  Aligned_cols=101  Identities=21%  Similarity=0.370  Sum_probs=68.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C-C
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G-R   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-~   89 (255)
                      |+++||+||+||+|...+......|+.++++..+.++.+    .+++.+.+..+   |..+++    +.+++.+.. | .
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~----~~~~lGAd~vi---~y~~~~----~~~~v~~~t~g~g  211 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE----LLKELGADHVI---NYREED----FVEQVRELTGGKG  211 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH----HHHhcCCCEEE---cCCccc----HHHHHHHHcCCCC
Confidence            899999999999999999888889988777776665544    33444543332   344433    445554433 3 5


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +|+++...|...            +               ...+..++++|+++.+....+
T Consensus       212 vDvv~D~vG~~~------------~---------------~~~l~~l~~~G~lv~ig~~~g  245 (326)
T COG0604         212 VDVVLDTVGGDT------------F---------------AASLAALAPGGRLVSIGALSG  245 (326)
T ss_pred             ceEEEECCCHHH------------H---------------HHHHHHhccCCEEEEEecCCC
Confidence            999999999521            1               123445667799999988765

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.33  E-value=0.0005  Score=62.99  Aligned_cols=47  Identities=28%  Similarity=0.394  Sum_probs=41.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++
T Consensus       376 ~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l  422 (529)
T PLN02520        376 PLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELADAV  422 (529)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh
Confidence            578999999999 69999999999999999999999988887776654

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=97.29  E-value=0.0045  Score=53.08  Aligned_cols=97  Identities=16%  Similarity=0.285  Sum_probs=68.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++|+|.+ |+|...++.....|++|+.++|++++++...    +.|.+..+   +.++++..+.+.+       .+
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~a~----~lGAd~~i---~~~~~~~~~~~~~-------~~  230 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLELAK----KLGADHVI---NSSDSDALEAVKE-------IA  230 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHHHH----HhCCcEEE---EcCCchhhHHhHh-------hC
Confidence            48999999999 9998877777779999999999998865543    33544433   3335555444333       29


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.+++ ..                          ....+++.++++|+++.++-..
T Consensus       231 d~ii~tv~-~~--------------------------~~~~~l~~l~~~G~~v~vG~~~  262 (339)
T COG1064         231 DAIIDTVG-PA--------------------------TLEPSLKALRRGGTLVLVGLPG  262 (339)
T ss_pred             cEEEECCC-hh--------------------------hHHHHHHHHhcCCEEEEECCCC
Confidence            99999998 32                          1233456677899999998663

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=97.28  E-value=0.0023  Score=53.41  Aligned_cols=118  Identities=13%  Similarity=0.119  Sum_probs=75.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC----CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           15 AVVTASTQGIGLGVAERLGLEG----ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.|+|++|.+|..++..|+..|    ..|+++|++++.++....++++.-........-.++  +....       +...
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~i~~~~--d~~~~-------~~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIKVSITD--DPYEA-------FKDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcEEEECC--chHHH-------hCCC
Confidence            4689998899999999999998    679999999988888877776542111001111121  11111       2379


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|..+|....++    .+   -...+..|+.-...+.+.+.++- +.+.++++|...
T Consensus        72 DiVv~t~~~~~~~g----~~---r~~~~~~n~~i~~~i~~~i~~~~-p~a~~i~~tNP~  122 (263)
T cd00650          72 DVVIITAGVGRKPG----MG---RLDLLKRNVPIVKEIGDNIEKYS-PDAWIIVVSNPV  122 (263)
T ss_pred             CEEEECCCCCCCcC----CC---HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence            99999999754321    12   23345556665556666665543 566777776544

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=97.22  E-value=0.0075  Score=54.68  Aligned_cols=114  Identities=15%  Similarity=0.201  Sum_probs=74.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-------------CHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-------------NEQH   75 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-------------~~~~   75 (255)
                      ...+.+++|.|+ |.+|...+..+...|+.|++++++.+.++..    ++.+.+.  +..|..             +++.
T Consensus       161 ~vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a----~~lGa~~--v~v~~~e~g~~~~gYa~~~s~~~  233 (511)
T TIGR00561       161 KVPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV----QSMGAEF--LELDFKEEGGSGDGYAKVMSEEF  233 (511)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCeE--EeccccccccccccceeecCHHH
Confidence            345679999995 8999999999999999999999998765433    3334433  233331             2344


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .+...+.+.+.....|++|+++-+...+.                    +..+.+..+..|++++.||.+++..
T Consensus       234 ~~~~~~~~~e~~~~~DIVI~TalipG~~a--------------------P~Lit~emv~~MKpGsvIVDlA~d~  287 (511)
T TIGR00561       234 IAAEMELFAAQAKEVDIIITTALIPGKPA--------------------PKLITEEMVDSMKAGSVIVDLAAEQ  287 (511)
T ss_pred             HHHHHHHHHHHhCCCCEEEECcccCCCCC--------------------CeeehHHHHhhCCCCCEEEEeeeCC
Confidence            44445555555668999999994422111                    1223444566677777788777544

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=97.21  E-value=0.0039  Score=53.29  Aligned_cols=103  Identities=23%  Similarity=0.337  Sum_probs=67.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|.|+++++|.+++..+.+.|++|+.+.++.+..+.+.+.   .+.+..   .|..+++..+++ .+...  +++
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~---~g~~~~---~~~~~~~~~~~v-~~~~~--~~~  215 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE---LGFDAA---INYKTPDLAEAL-KEAAP--DGI  215 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh---cCCceE---EecCChhHHHHH-HHhcc--CCc
Confidence            578999999999999999999999999999998888765544322   232211   122333322222 22221  469


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.+.|..                           ..+...+.+++.|+++.++...
T Consensus       216 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~  247 (329)
T cd05288         216 DVYFDNVGGE---------------------------ILDAALTLLNKGGRIALCGAIS  247 (329)
T ss_pred             eEEEEcchHH---------------------------HHHHHHHhcCCCceEEEEeecc
Confidence            9999987731                           2334455567788999887543

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=97.20  E-value=0.084  Score=44.03  Aligned_cols=239  Identities=16%  Similarity=0.155  Sum_probs=134.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEe--CChh----------HHHHHHHHHHHcCCeEEEEEecCCCHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGL-EGASVVISS--RKQK----------NVDKAVEKLKALGIEVIGIICHVSNEQHRK   77 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~--r~~~----------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~   77 (255)
                      -.|+|||.|+++|.|.+.--..+= .|+..+.+.  |...          ......+..++.|--..-+..|.-+.+--+
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k~  119 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFGPGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMKQ  119 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhCCCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHHH
Confidence            368999999999999875444332 466655442  2111          112333444455655666788988888889


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCC---------------------------------CcCCCCHHHHHHHHHHHhHH
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAA---------------------------------DLLKTKESVLDKLWEINVKS  124 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~---------------------------------~~~~~~~~~~~~~~~~n~~~  124 (255)
                      +.++.+...+|++|.+|+.-+......                                 .++..+.+++.+...+.=--
T Consensus       120 kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~VMGGe  199 (398)
T COG3007         120 KVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAVMGGE  199 (398)
T ss_pred             HHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHhhCcc
Confidence            999999999999999998765311000                                 12355566666654443222


Q ss_pred             HH-HHHHHHHh--cccCCCeEEEEcCcCcc--CCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhh
Q 025259          125 SI-LLMQDAAP--HMQKGSSVVFISSIAGY--QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQ  198 (255)
Q Consensus       125 ~~-~~~~~~~~--~l~~~~~iv~vss~~~~--~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~  198 (255)
                      -| ..+++++.  .+.++.+-|..|-+...  ++.......+.+|.=++.-++.+...++. +=+.+....--+-|....
T Consensus       200 DWq~WidaLl~advlaeg~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVTqASs  279 (398)
T COG3007         200 DWQMWIDALLEADVLAEGAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVTQASS  279 (398)
T ss_pred             hHHHHHHHHHhccccccCceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHhhhhh
Confidence            22 33566654  34455555555543332  34446677899999999999999999876 223333333333333222


Q ss_pred             hhcCCHH-HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          199 ALLGNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       199 ~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .++.-+. +.-.++   .++.-+.-|-+.+.+-.|+++.-  -.|+.+.+|.-.-+|
T Consensus       280 aIP~~plYla~lfk---vMKekg~HEgcIeQi~rlfse~l--y~g~~~~~D~e~rlR  331 (398)
T COG3007         280 AIPMMPLYLAILFK---VMKEKGTHEGCIEQIDRLFSEKL--YSGSKIQLDDEGRLR  331 (398)
T ss_pred             ccccccHHHHHHHH---HHHHcCcchhHHHHHHHHHHHHh--hCCCCCCcCcccccc
Confidence            2211111 111111   01223455566666666665532  226666766554444

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=97.20  E-value=0.0039  Score=53.92  Aligned_cols=82  Identities=20%  Similarity=0.336  Sum_probs=56.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh---------------------hHHHHHHHHHHHcC--CeE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ---------------------KNVDKAVEKLKALG--IEV   63 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~---------------------~~~~~~~~~~~~~~--~~~   63 (255)
                      .+|+.++|+|.|+ ||+|..++..|++.|. ++.++|.+.                     .+.+...+.+++.+  .++
T Consensus        20 ~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v   98 (339)
T PRK07688         20 QKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRV   98 (339)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEE
Confidence            4688999999998 8999999999999998 599999863                     23344445555443  345


Q ss_pred             EEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           64 IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        64 ~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+..+++. +.+..+++       ..|++|.+..
T Consensus        99 ~~~~~~~~~-~~~~~~~~-------~~DlVid~~D  125 (339)
T PRK07688         99 EAIVQDVTA-EELEELVT-------GVDLIIDATD  125 (339)
T ss_pred             EEEeccCCH-HHHHHHHc-------CCCEEEEcCC
Confidence            566666653 33333322       5788887744

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.19  E-value=0.0017  Score=57.69  Aligned_cols=75  Identities=8%  Similarity=0.139  Sum_probs=55.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++++++|.|+ |+.|+.++++|+..|+ .++++.|+.++.+.+.+++..  ..  .+     ..++       +.+.
T Consensus       177 ~~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~--~~--~~-----~~~~-------l~~~  239 (414)
T PRK13940        177 DNISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRN--AS--AH-----YLSE-------LPQL  239 (414)
T ss_pred             cCccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcC--Ce--Ee-----cHHH-------HHHH
Confidence            3578999999998 9999999999999996 599999998887777665421  11  11     1122       2223


Q ss_pred             cCCCcEEEECCCC
Q 025259           87 YGRIDVFVLNAAV   99 (255)
Q Consensus        87 ~g~~d~lv~~ag~   99 (255)
                      +...|++|++.+.
T Consensus       240 l~~aDiVI~aT~a  252 (414)
T PRK13940        240 IKKADIIIAAVNV  252 (414)
T ss_pred             hccCCEEEECcCC
Confidence            3469999999985

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=97.19  E-value=0.0056  Score=52.97  Aligned_cols=99  Identities=17%  Similarity=0.209  Sum_probs=64.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..+++++|+|+ |++|...+..+...|+ .|+++++++++++..    ++.|.+..+   |..++ ++.+    +.+..+
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a----~~lGa~~vi---~~~~~-~~~~----~~~~~g  234 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA----REMGADKLV---NPQND-DLDH----YKAEKG  234 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH----HHcCCcEEe---cCCcc-cHHH----HhccCC
Confidence            36899999986 8999999988878898 488899988776533    334544322   33332 2222    222235


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .+|+++.++|..           +.               .+.....++++|+++.++.
T Consensus       235 ~~D~vid~~G~~-----------~~---------------~~~~~~~l~~~G~iv~~G~  267 (343)
T PRK09880        235 YFDVSFEVSGHP-----------SS---------------INTCLEVTRAKGVMVQVGM  267 (343)
T ss_pred             CCCEEEECCCCH-----------HH---------------HHHHHHHhhcCCEEEEEcc
Confidence            699999999841           11               1223444678899999874

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=97.14  E-value=0.0091  Score=51.26  Aligned_cols=120  Identities=13%  Similarity=0.078  Sum_probs=77.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      -++.|+|++|.+|.+++..|+..|.       .++++|.++  +.++....++.+....... ...++. ..    .+  
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~i~~-~~----~~--   75 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA-GVVATT-DP----EE--   75 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC-CcEEec-Ch----HH--
Confidence            4789999999999999999998874       699999965  4466666666554210000 000110 00    11  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        .+...|++|.+||...  ++  .   ++-.+.++.|..-.-.+.+.+.++-.+.+.++.+|...
T Consensus        76 --~~~daDvVVitAG~~~--k~--g---~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv  132 (323)
T TIGR01759        76 --AFKDVDAALLVGAFPR--KP--G---MERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVGNPA  132 (323)
T ss_pred             --HhCCCCEEEEeCCCCC--CC--C---CcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeCCcH
Confidence              2236899999999743  22  2   23455688888877777777777654467777777543

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=97.13  E-value=0.0057  Score=50.47  Aligned_cols=82  Identities=16%  Similarity=0.270  Sum_probs=55.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.|+ ||+|..+++.|+..|.. +.++|.+.                   .+.+.+.+.+++.+  .++..
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~lnp~v~i~~  106 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARINPHIAIET  106 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHHCCCCEEEE
Confidence            4688999999998 99999999999999975 77876642                   23444455565554  34455


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +...++ ++.+..++       ...|++|.+..
T Consensus       107 ~~~~i~-~~~~~~~~-------~~~DiVi~~~D  131 (245)
T PRK05690        107 INARLD-DDELAALI-------AGHDLVLDCTD  131 (245)
T ss_pred             EeccCC-HHHHHHHH-------hcCCEEEecCC
Confidence            554444 33333332       26888888765

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=97.12  E-value=0.0037  Score=54.93  Aligned_cols=83  Identities=25%  Similarity=0.339  Sum_probs=57.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHHcCC--eEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK-------------------QKNVDKAVEKLKALGI--EVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~   65 (255)
                      .+|++++|+|.|+ ||+|.+++..|++.|.. +.++|++                   ..+.+.+.+.+.+.+.  ++..
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  209 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEA  209 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEE
Confidence            4688999999965 79999999999999985 8999987                   3456666667766543  3444


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      +...+. .+.+..+++       ..|++|++..-
T Consensus       210 ~~~~~~-~~~~~~~~~-------~~D~Vv~~~d~  235 (376)
T PRK08762        210 VQERVT-SDNVEALLQ-------DVDVVVDGADN  235 (376)
T ss_pred             EeccCC-hHHHHHHHh-------CCCEEEECCCC
Confidence            444443 233333332       68888888763

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=97.12  E-value=0.0038  Score=54.12  Aligned_cols=80  Identities=18%  Similarity=0.239  Sum_probs=54.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-cC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK-YG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   88 (255)
                      -+|+.+||.||+||+|.+.++.....|+..+++.++++..+    .++..|.+.   ..|..+++-++    ++.+. .+
T Consensus       156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~----l~k~lGAd~---vvdy~~~~~~e----~~kk~~~~  224 (347)
T KOG1198|consen  156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLE----LVKKLGADE---VVDYKDENVVE----LIKKYTGK  224 (347)
T ss_pred             CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHH----HHHHcCCcE---eecCCCHHHHH----HHHhhcCC
Confidence            35889999999999999999888888966566666665532    233445333   24666644433    33332 45


Q ss_pred             CCcEEEECCCCC
Q 025259           89 RIDVFVLNAAVN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      ++|+++.|+|..
T Consensus       225 ~~DvVlD~vg~~  236 (347)
T KOG1198|consen  225 GVDVVLDCVGGS  236 (347)
T ss_pred             CccEEEECCCCC
Confidence            899999999963

>cd08293 PTGR2 Prostaglandin reductase

Probab=97.12  E-value=0.0025  Score=54.98  Aligned_cols=100  Identities=15%  Similarity=0.183  Sum_probs=64.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++||+|++|++|..++......|+ +|+.+.+++++.+.+.++   .|.+..+   |..++ .+.+.+.++..  +++|
T Consensus       156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~---lGa~~vi---~~~~~-~~~~~i~~~~~--~gvd  226 (345)
T cd08293         156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSE---LGFDAAI---NYKTD-NVAERLRELCP--EGVD  226 (345)
T ss_pred             CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh---cCCcEEE---ECCCC-CHHHHHHHHCC--CCce
Confidence            8999999999999999887777898 799998888765554433   3433322   22222 22222233221  3699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +++.+.|...            +               +.....+++.|++|.++..
T Consensus       227 ~vid~~g~~~------------~---------------~~~~~~l~~~G~iv~~G~~  256 (345)
T cd08293         227 VYFDNVGGEI------------S---------------DTVISQMNENSHIILCGQI  256 (345)
T ss_pred             EEEECCCcHH------------H---------------HHHHHHhccCCEEEEEeee
Confidence            9999887311            1               2233456788999988743

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=97.11  E-value=0.0023  Score=55.57  Aligned_cols=103  Identities=20%  Similarity=0.266  Sum_probs=66.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|++|++|..++......|++|+.+++++++.+.+.++   .|.+..+   |..+.+.+.+.+.+..  .+++
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~---lGa~~vi---~~~~~~~~~~~i~~~~--~~gv  229 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNK---LGFDEAF---NYKEEPDLDAALKRYF--PEGI  229 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHh---cCCCEEE---ECCCcccHHHHHHHHC--CCCc
Confidence            588999999999999999888888899999888887765444322   3443222   2222222222222221  1368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |+++.+.|..            .               .+..+..++++|+++.++..
T Consensus       230 D~v~d~vG~~------------~---------------~~~~~~~l~~~G~iv~~G~~  260 (348)
T PLN03154        230 DIYFDNVGGD------------M---------------LDAALLNMKIHGRIAVCGMV  260 (348)
T ss_pred             EEEEECCCHH------------H---------------HHHHHHHhccCCEEEEECcc
Confidence            9999988831            1               12334556778999988754

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=97.09  E-value=0.0056  Score=51.19  Aligned_cols=108  Identities=22%  Similarity=0.283  Sum_probs=74.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   88 (255)
                      -.|.+++|++|+|++|.-+..--.-+|++|+.+.-.+++.+-+.+++   |.+.   -.|...+ ++   .+.+.+..+ 
T Consensus       149 k~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~l---GfD~---~idyk~~-d~---~~~L~~a~P~  218 (340)
T COG2130         149 KAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEEL---GFDA---GIDYKAE-DF---AQALKEACPK  218 (340)
T ss_pred             CCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhc---CCce---eeecCcc-cH---HHHHHHHCCC
Confidence            35999999999999998665544457999999999888866555544   3221   2344444 22   333333343 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~  154 (255)
                      .+|+.+-|.|.-                           +..+++++|...+||+..+-++.+...
T Consensus       219 GIDvyfeNVGg~---------------------------v~DAv~~~ln~~aRi~~CG~IS~YN~~  257 (340)
T COG2130         219 GIDVYFENVGGE---------------------------VLDAVLPLLNLFARIPVCGAISQYNAP  257 (340)
T ss_pred             CeEEEEEcCCch---------------------------HHHHHHHhhccccceeeeeehhhcCCC
Confidence            699999999952                           235667888888899988877776544

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=97.08  E-value=0.0031  Score=53.23  Aligned_cols=81  Identities=17%  Similarity=0.286  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++++|+|+++++|.++++.+...|+.|++++++++..+.. +   ..+.+.   ..+..+.+..+++.+.. . .++
T Consensus       138 ~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~~---~~~~~~~~~~~~~~~~~-~-~~~  208 (323)
T cd05276         138 KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-R---ALGADV---AINYRTEDFAEEVKEAT-G-GRG  208 (323)
T ss_pred             CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HcCCCE---EEeCCchhHHHHHHHHh-C-CCC
Confidence            3688999999999999999999999999999999987665543 2   233321   23444444333333221 1 136


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|.+++++|.
T Consensus       209 ~d~vi~~~g~  218 (323)
T cd05276         209 VDVILDMVGG  218 (323)
T ss_pred             eEEEEECCch
Confidence            9999999883

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=97.08  E-value=0.0031  Score=53.84  Aligned_cols=116  Identities=14%  Similarity=0.153  Sum_probs=74.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe--EEEEeCCh--hHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGAS--VVISSRKQ--KNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~--Vv~~~r~~--~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++.|+|++|.+|..++..|+..|..  |+++++++  +.++....++.+.    +...   ....+..  .+    .  
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~---~i~~~~d--~~----~--   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDA---EIKISSD--LS----D--   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCc---EEEECCC--HH----H--
Confidence            36899999999999999999999865  99999965  5555444444331    1111   1111111  11    1  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        +...|++|.++|...  .  ...+.   .+.++.|+.-...+.+.+.+.. +.+.+|++++..
T Consensus        70 --l~~aDiViitag~p~--~--~~~~r---~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~npv  124 (309)
T cd05294          70 --VAGSDIVIITAGVPR--K--EGMSR---LDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTNPV  124 (309)
T ss_pred             --hCCCCEEEEecCCCC--C--CCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCch
Confidence              237999999999632  2  22232   3446777777777777766654 466788888754

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=97.06  E-value=0.0043  Score=52.40  Aligned_cols=82  Identities=15%  Similarity=0.241  Sum_probs=52.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChh---HHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQK---NVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++++|+++|.|+ ||-+++++..|+..|+ +|.++.|+++   +.+++.+++.... ..+.+  .++.+.+.+.      
T Consensus       121 ~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~--~~~~~~~~l~------  191 (288)
T PRK12749        121 DIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTV--TDLADQQAFA------  191 (288)
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEE--echhhhhhhh------
Confidence            578999999997 5559999999999997 5999999954   6666666554321 11111  1221111111      


Q ss_pred             HHHcCCCcEEEECCCCC
Q 025259           84 VEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                       +...+.|+|||+-...
T Consensus       192 -~~~~~aDivINaTp~G  207 (288)
T PRK12749        192 -EALASADILTNGTKVG  207 (288)
T ss_pred             -hhcccCCEEEECCCCC
Confidence             1223689999977543

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.06  E-value=0.0031  Score=49.38  Aligned_cols=99  Identities=22%  Similarity=0.300  Sum_probs=63.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+++|+++.|.|- |.||+++++.+...|++|+.++|.......    ....+  +   ..  .   +++.++.     
T Consensus        31 ~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~----~~~~~--~---~~--~---~l~ell~-----   90 (178)
T PF02826_consen   31 GRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEG----ADEFG--V---EY--V---SLDELLA-----   90 (178)
T ss_dssp             BS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHH----HHHTT--E---EE--S---SHHHHHH-----
T ss_pred             ccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhh----ccccc--c---ee--e---ehhhhcc-----
Confidence            45789999999976 899999999999999999999999875441    11111  1   11  1   3333444     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                        ..|+|+++........  .                   .+.+..+..|+++..+|+++-.
T Consensus        91 --~aDiv~~~~plt~~T~--~-------------------li~~~~l~~mk~ga~lvN~aRG  129 (178)
T PF02826_consen   91 --QADIVSLHLPLTPETR--G-------------------LINAEFLAKMKPGAVLVNVARG  129 (178)
T ss_dssp             --H-SEEEE-SSSSTTTT--T-------------------SBSHHHHHTSTTTEEEEESSSG
T ss_pred             --hhhhhhhhhccccccc--e-------------------eeeeeeeeccccceEEEeccch
Confidence              4899998888643111  1                   2234456677777778887643

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=97.05  E-value=0.013  Score=52.27  Aligned_cols=116  Identities=13%  Similarity=0.038  Sum_probs=82.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-------CC--eEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE-------GA--SVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~-------G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~   79 (255)
                      -+|.|+|++|.+|.+++..|+..       |.  ++++++++++.++...-++++.-    .++. +..  .+.+     
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~-i~~--~~ye-----  172 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVS-IGI--DPYE-----  172 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceE-Eec--CCHH-----
Confidence            37999999999999999999988       65  58999999999988888887642    1111 111  1211     


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                            .+...|++|..||...  ++  ..+   -.+.++.|..=.-.+.+.+.++-.+.+.||.+|...
T Consensus       173 ------~~kdaDiVVitAG~pr--kp--G~t---R~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        173 ------VFQDAEWALLIGAKPR--GP--GME---RADLLDINGQIFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             ------HhCcCCEEEECCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                  1237999999999743  22  223   455688888877777777777544667788888654

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=97.03  E-value=0.0037  Score=53.57  Aligned_cols=103  Identities=19%  Similarity=0.230  Sum_probs=67.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.++||+|++|++|..+++.....|++|+.+.+++++.+.+    .+.|.+..+   |..+.+...+.++...  -+++
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~----~~lGa~~vi---~~~~~~~~~~~~~~~~--~~gv  208 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL----KKLGFDVAF---NYKTVKSLEETLKKAS--PDGY  208 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEEE---eccccccHHHHHHHhC--CCCe
Confidence            588999999999999999888778899999999887765443    334543322   2222223333333322  1368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.+.|...                           .+.....++++|+++.++...
T Consensus       209 dvv~d~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  240 (325)
T TIGR02825       209 DCYFDNVGGEF---------------------------SNTVIGQMKKFGRIAICGAIS  240 (325)
T ss_pred             EEEEECCCHHH---------------------------HHHHHHHhCcCcEEEEecchh
Confidence            99999887310                           123344567889999887643

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=97.02  E-value=0.0018  Score=53.59  Aligned_cols=74  Identities=11%  Similarity=0.168  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++|+|||+- |+.+++.|.+.|+.|+.+.++....+...    ..+  ...+..+..+.+++..++.+     .++|.+
T Consensus         2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~----~~g--~~~v~~g~l~~~~l~~~l~~-----~~i~~V   69 (256)
T TIGR00715         2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP----IHQ--ALTVHTGALDPQELREFLKR-----HSIDIL   69 (256)
T ss_pred             eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc----ccC--CceEEECCCCHHHHHHHHHh-----cCCCEE
Confidence            6999999998 99999999999999999988876533322    111  23455677777777666654     279999


Q ss_pred             EECCCC
Q 025259           94 VLNAAV   99 (255)
Q Consensus        94 v~~ag~   99 (255)
                      |+.+..
T Consensus        70 IDAtHP   75 (256)
T TIGR00715        70 VDATHP   75 (256)
T ss_pred             EEcCCH
Confidence            998874

This enzyme was found to be a monomer by gel filtration.

>PTZ00117 malate dehydrogenase; Provisional

Probab=97.01  E-value=0.0074  Score=51.80  Aligned_cols=119  Identities=18%  Similarity=0.149  Sum_probs=71.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+.+++.|+|+ |.+|..++..++..| ..++++|++++.++...-++....    ... .+.+ .++.   + .+    
T Consensus         3 ~~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~-~i~~-~~d~---~-~l----   71 (319)
T PTZ00117          3 VKRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNI-NILG-TNNY---E-DI----   71 (319)
T ss_pred             CCCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCe-EEEe-CCCH---H-Hh----
Confidence            35678999997 889999999999988 679999999876654333333321    111 1111 1221   1 12    


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                         ...|++|.++|....  +  ..+   ..+.+..|..-...+.+.+.++ .+.+.++++|....
T Consensus        72 ---~~ADiVVitag~~~~--~--g~~---r~dll~~n~~i~~~i~~~i~~~-~p~a~vivvsNP~d  126 (319)
T PTZ00117         72 ---KDSDVVVITAGVQRK--E--EMT---REDLLTINGKIMKSVAESVKKY-CPNAFVICVTNPLD  126 (319)
T ss_pred             ---CCCCEEEECCCCCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHH
Confidence               268999999997432  1  122   3445667774333344444433 25566788776553

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=97.00  E-value=0.0085  Score=48.87  Aligned_cols=82  Identities=20%  Similarity=0.314  Sum_probs=56.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHHcCC--eEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK-------------------QKNVDKAVEKLKALGI--EVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~--~~~~   65 (255)
                      .+|++++|+|.| .||+|.++++.|++.|.. +.++|.+                   ..+.+.+.+.+++.++  ++..
T Consensus        17 ~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~   95 (228)
T cd00757          17 EKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEA   95 (228)
T ss_pred             HHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEE
Confidence            468899999998 679999999999999985 7777543                   2345556666666543  4555


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +..+++ .+.+..+++       ..|++|.+..
T Consensus        96 ~~~~i~-~~~~~~~~~-------~~DvVi~~~d  120 (228)
T cd00757          96 YNERLD-AENAEELIA-------GYDLVLDCTD  120 (228)
T ss_pred             ecceeC-HHHHHHHHh-------CCCEEEEcCC
Confidence            555553 333333332       6899888866

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.98  E-value=0.00088  Score=43.92  Aligned_cols=36  Identities=28%  Similarity=0.426  Sum_probs=23.8

Q ss_pred             CCC-CEEEEeCCCCchHHH--HHHHHHHcCCeEEEEeCCh
Q 025259           10 FQG-KVAVVTASTQGIGLG--VAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        10 l~~-k~vlVtG~~~giG~~--~a~~l~~~G~~Vv~~~r~~   46 (255)
                      ++| |+|||+|+|+|.|++  |+..| ..|++.+.+....
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~fEk   74 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSFEK   74 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE---
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEeecc
Confidence            345 899999999999999  66666 7788887776543

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=96.97  E-value=0.0048  Score=55.43  Aligned_cols=79  Identities=22%  Similarity=0.240  Sum_probs=53.6

Q ss_pred             ccCCCCEEEEeCCC----------------CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC
Q 025259            8 KRFQGKVAVVTAST----------------QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS   71 (255)
Q Consensus         8 ~~l~~k~vlVtG~~----------------~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~   71 (255)
                      .+|+||++|||+|.                |-.|.++|+.+...|++|.++.-... +.        ....+.++.  +.
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~-~~--------~p~~v~~i~--V~  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVD-LA--------DPQGVKVIH--VE  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcC-CC--------CCCCceEEE--ec
Confidence            46999999999884                56799999999999999998764321 10        112233333  33


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           72 NEQHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      .-+++   .+.+.+.+. .|++|++|++..
T Consensus       321 ta~eM---~~av~~~~~-~Di~I~aAAVaD  346 (475)
T PRK13982        321 SARQM---LAAVEAALP-ADIAIFAAAVAD  346 (475)
T ss_pred             CHHHH---HHHHHhhCC-CCEEEEeccccc
Confidence            44444   444444443 799999999875

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.96  E-value=0.0092  Score=50.33  Aligned_cols=101  Identities=15%  Similarity=0.192  Sum_probs=66.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~g   88 (255)
                      -|+++-|+|++| +|. ++-++++ .|++|+.+++...+-++..+   ..|.+.++   |.+ |++.++++.+.      
T Consensus       181 pG~~vgI~GlGG-LGh-~aVq~AKAMG~rV~vis~~~~kkeea~~---~LGAd~fv---~~~~d~d~~~~~~~~------  246 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGH-MAVQYAKAMGMRVTVISTSSKKKEEAIK---SLGADVFV---DSTEDPDIMKAIMKT------  246 (360)
T ss_pred             CCcEEEEecCcc-cch-HHHHHHHHhCcEEEEEeCCchhHHHHHH---hcCcceeE---EecCCHHHHHHHHHh------
Confidence            599999999998 885 5555655 59999999999866555544   44666554   456 77777766653      


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       .|.+++++--.. ..+                       +..++.+++.+|++|+++-...
T Consensus       247 -~dg~~~~v~~~a-~~~-----------------------~~~~~~~lk~~Gt~V~vg~p~~  283 (360)
T KOG0023|consen  247 -TDGGIDTVSNLA-EHA-----------------------LEPLLGLLKVNGTLVLVGLPEK  283 (360)
T ss_pred             -hcCcceeeeecc-ccc-----------------------hHHHHHHhhcCCEEEEEeCcCC
Confidence             555555544211 111                       1234566788999999986654

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=96.96  E-value=0.013  Score=49.95  Aligned_cols=117  Identities=18%  Similarity=0.124  Sum_probs=76.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++.|+|++|.+|.+++..|+..|.  .++++|.+  .++...-++++.........+. .+ +++       .+.+...|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~~-------y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EEL-------KKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cch-------HHhcCCCC
Confidence            689999999999999999998884  59999998  4444444454432111111110 11 111       11223799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|.+||...  ++  ..+   -.+.++.|..-...+.+.+.++ .+.+.++++|...
T Consensus        71 ivvitaG~~~--k~--g~t---R~dll~~N~~i~~~i~~~i~~~-~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPR--KP--GMT---RDDLFNINAGIVRDLATAVAKA-CPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEccCch
Confidence            9999999743  22  223   4556888888888888888776 4567888888776

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR00537 hemK_rel_arch HemK-related putative methylase

Probab=96.95  E-value=0.035  Score=43.29  Aligned_cols=121  Identities=17%  Similarity=0.211  Sum_probs=77.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..+++++|=.|++.|.   ++..+++.|..|++++.+++.++...+.++..+.++.++.+|..+..            .+
T Consensus        17 ~~~~~~vLdlG~G~G~---~~~~l~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------------~~   81 (179)
T TIGR00537        17 ELKPDDVLEIGAGTGL---VAIRLKGKGKCILTTDINPFAVKELRENAKLNNVGLDVVMTDLFKGV------------RG   81 (179)
T ss_pred             hcCCCeEEEeCCChhH---HHHHHHhcCCEEEEEECCHHHHHHHHHHHHHcCCceEEEEccccccc------------CC
Confidence            4567888989977774   45556667778999999999988888888777667888888875421            13


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHH-HHH---HHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDK-LWE---INVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~-~~~---~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ++|.++.|............   .++.. .+.   .+..-.-.+++.+..+|+++|+++++.+
T Consensus        82 ~fD~Vi~n~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~~~~~~~  141 (179)
T TIGR00537        82 KFDVILFNPPYLPLEDDLRR---GDWLDVAIDGGKDGRKVIDRFLDELPEILKEGGRVQLIQS  141 (179)
T ss_pred             cccEEEECCCCCCCcchhcc---cchhhhhhhcCCchHHHHHHHHHhHHHhhCCCCEEEEEEe
Confidence            79999999876532211111   11111 010   0111133456666677888998877653

The gene hemK from E. coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase (Medline 95189105). Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity (Medline 99237242). Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. This model represents an archaeal and eukaryotic protein family that lacks an N-terminal domain found in HemK and its eubacterial homologs. It is found in a single copy in the first six completed archaeal and eukaryotic genomes.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=96.94  E-value=0.0048  Score=52.71  Aligned_cols=78  Identities=18%  Similarity=0.295  Sum_probs=52.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.++||+||+|++|..+++.....|+.|+.+.+++++.+.+    ++.|.+..   .|..+++..++ +.+..  -+++
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l----~~~Ga~~v---i~~~~~~~~~~-v~~~~--~~gv  212 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL----KELGFDAV---FNYKTVSLEEA-LKEAA--PDGI  212 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCCccHHHH-HHHHC--CCCc
Confidence            588999999999999998888888899999999888765444    33454322   23333322222 22221  1368


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |+++.+.|
T Consensus       213 d~vld~~g  220 (329)
T cd08294         213 DCYFDNVG  220 (329)
T ss_pred             EEEEECCC
Confidence            99998877

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.92  E-value=0.0046  Score=51.89  Aligned_cols=78  Identities=18%  Similarity=0.302  Sum_probs=57.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +.++++++|.|+ ||-+++++.+|++.|+ +++++.|+.++.+++.+.+.+.+..+.  ..+..+.+..+          
T Consensus       123 ~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~--~~~~~~~~~~~----------  189 (283)
T COG0169         123 DVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVE--AAALADLEGLE----------  189 (283)
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhcccccc--ccccccccccc----------
Confidence            446899999986 6789999999999996 599999999999999988877654221  12222222111          


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                       ..|++||+-...
T Consensus       190 -~~dliINaTp~G  201 (283)
T COG0169         190 -EADLLINATPVG  201 (283)
T ss_pred             -ccCEEEECCCCC
Confidence             489999988765

>PRK05442 malate dehydrogenase; Provisional

Probab=96.91  E-value=0.012  Score=50.67  Aligned_cols=117  Identities=15%  Similarity=0.099  Sum_probs=76.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCChh--HHHHHHHHHHHcC----CeEEEEEecCCCHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQK--NVDKAVEKLKALG----IEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~   78 (255)
                      .+++.|+|++|.+|.+++..|+..|.       .++++|+++.  .++....++.+..    .++.     ++.      
T Consensus         4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~-----i~~------   72 (326)
T PRK05442          4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVV-----ITD------   72 (326)
T ss_pred             CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcE-----Eec------
Confidence            45899999999999999999987653       6999999643  3555445554431    1111     110      


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                         ...+.+..-|++|.+||...  ++  .   ++-.+.+..|..=.-.+.+.+.++-.+.+.++.+|...
T Consensus        73 ---~~y~~~~daDiVVitaG~~~--k~--g---~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsNPv  133 (326)
T PRK05442         73 ---DPNVAFKDADVALLVGARPR--GP--G---MERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGNPA  133 (326)
T ss_pred             ---ChHHHhCCCCEEEEeCCCCC--CC--C---CcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence               00122337999999999743  22  2   23455688888877777777777654567788887544

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=96.91  E-value=0.0089  Score=48.18  Aligned_cols=81  Identities=15%  Similarity=0.240  Sum_probs=54.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh------------------hHHHHHHHHHHHcC--CeEEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ------------------KNVDKAVEKLKALG--IEVIGI   66 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~------------------~~~~~~~~~~~~~~--~~~~~~   66 (255)
                      .+|+.++|+|.|+ ||+|..+++.|++.|.. +.++|.+.                  .+.+.+.+.+++.+  .++..+
T Consensus        24 ~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~lnp~v~v~~~  102 (212)
T PRK08644         24 EKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEINPFVEIEAH  102 (212)
T ss_pred             HHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHHCCCCEEEEE
Confidence            4688999999995 89999999999999987 88988872                  23344455554433  345555


Q ss_pred             EecCCCHHHHHHHHHHHHHHcCCCcEEEECC
Q 025259           67 ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA   97 (255)
Q Consensus        67 ~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~a   97 (255)
                      ...+++ +.+.+++       ...|++|.+.
T Consensus       103 ~~~i~~-~~~~~~~-------~~~DvVI~a~  125 (212)
T PRK08644        103 NEKIDE-DNIEELF-------KDCDIVVEAF  125 (212)
T ss_pred             eeecCH-HHHHHHH-------cCCCEEEECC
Confidence            555543 2222222       2578877774

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=96.90  E-value=0.02  Score=49.66  Aligned_cols=103  Identities=17%  Similarity=0.268  Sum_probs=64.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC--HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN--EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~~~~~~~~~~~~~g   88 (255)
                      .+++++|.|+ |++|...+......|++|+++++++++++.+    ++.+.+..+   |..+  .+.+.+.+.++.+. .
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~~i---~~~~~~~~~~~~~~~~~t~~-~  236 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM----KGFGADLTL---NPKDKSAREVKKLIKAFAKA-R  236 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH----HHhCCceEe---cCccccHHHHHHHHHhhccc-C
Confidence            4889999999 9999999988888999999999988776544    233443322   2222  22333333333221 1


Q ss_pred             CCc----EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RID----VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d----~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|    .++.+.|...                          ..+..++.++++|+++.++..
T Consensus       237 g~d~~~d~v~d~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  274 (349)
T TIGR03201       237 GLRSTGWKIFECSGSKP--------------------------GQESALSLLSHGGTLVVVGYT  274 (349)
T ss_pred             CCCCCcCEEEECCCChH--------------------------HHHHHHHHHhcCCeEEEECcC
Confidence            344    7777777411                          122334556788999998754

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>PRK04148 hypothetical protein; Provisional

Probab=96.89  E-value=0.0031  Score=46.71  Aligned_cols=55  Identities=22%  Similarity=0.219  Sum_probs=44.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      +++++++.|.+  .|.+++..|++.|++|+++|.++...+...+.      .+.++.+|+.++
T Consensus        16 ~~~kileIG~G--fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~------~~~~v~dDlf~p   70 (134)
T PRK04148         16 KNKKIVELGIG--FYFKVAKKLKESGFDVIVIDINEKAVEKAKKL------GLNAFVDDLFNP   70 (134)
T ss_pred             cCCEEEEEEec--CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHh------CCeEEECcCCCC
Confidence            56889999988  88889999999999999999999876554332      246678888863

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=96.89  E-value=0.011  Score=51.62  Aligned_cols=63  Identities=17%  Similarity=0.200  Sum_probs=46.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcCC--eEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALGI--EVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~   65 (255)
                      .+|++++|+|.|+ ||+|.++++.|+..|.. +.++|.+.                   .+.+.+.+.+++.+.  ++..
T Consensus        24 ~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~np~v~v~~  102 (355)
T PRK05597         24 QSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLALNPDVKVTV  102 (355)
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHHCCCcEEEE
Confidence            4688999999988 89999999999999986 88887753                   345556666666543  4444


Q ss_pred             EEecCC
Q 025259           66 IICHVS   71 (255)
Q Consensus        66 ~~~D~~   71 (255)
                      +...++
T Consensus       103 ~~~~i~  108 (355)
T PRK05597        103 SVRRLT  108 (355)
T ss_pred             EEeecC
Confidence            444444

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.88  E-value=0.0031  Score=48.83  Aligned_cols=39  Identities=26%  Similarity=0.267  Sum_probs=35.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .++++|+++|.|++.-+|..+++.|.+.|++|.++.|+.
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~   78 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT   78 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence            468999999999977789999999999999999999874

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.87  E-value=0.012  Score=50.34  Aligned_cols=118  Identities=16%  Similarity=0.119  Sum_probs=72.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++.|+|++|.+|.+++..|+..+.  .++++|+++  .+....++.+......+..+.  +.++       ..+.+...|
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~--a~g~a~DL~~~~~~~~i~~~~--~~~~-------~~~~~~daD   69 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG--AAGVAADLSHIPTAASVKGFS--GEEG-------LENALKGAD   69 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC--CcEEEchhhcCCcCceEEEec--CCCc-------hHHHcCCCC
Confidence            478999999999999999998875  599999987  222223333321111111000  0001       112234799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ++|.+||...  .+  .   .+-.+.+..|+.=.-.+.+.+.++ .+.+.++++|....
T Consensus        70 ivvitaG~~~--~~--g---~~R~dll~~N~~I~~~i~~~i~~~-~p~~iiivvsNPvD  120 (312)
T TIGR01772        70 VVVIPAGVPR--KP--G---MTRDDLFNVNAGIVKDLVAAVAES-CPKAMILVITNPVN  120 (312)
T ss_pred             EEEEeCCCCC--CC--C---ccHHHHHHHhHHHHHHHHHHHHHh-CCCeEEEEecCchh
Confidence            9999999743  22  1   224556888888666666666655 36677888887764

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=96.84  E-value=0.027  Score=48.19  Aligned_cols=117  Identities=10%  Similarity=0.055  Sum_probs=78.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+|.|+|+ |.+|.+++..|+..|.  .++++|.+++.++....+++...   ....+..+  .+.+       .    
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~-------~----   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYS-------V----   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHH-------H----
Confidence            357899996 9999999999998874  49999999988887777776542   11111111  1211       1    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +...|++|.+||...  .+  ..+.   .+.+..|..=...+.+.+.++ .+.+.++++|....
T Consensus        69 ~~~adivvitaG~~~--k~--g~~R---~dll~~N~~i~~~~~~~i~~~-~p~~~vivvsNP~d  124 (312)
T cd05293          69 TANSKVVIVTAGARQ--NE--GESR---LDLVQRNVDIFKGIIPKLVKY-SPNAILLVVSNPVD  124 (312)
T ss_pred             hCCCCEEEECCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEccChHH
Confidence            237999999999753  22  2333   445777777666666766666 46678888886553

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=96.81  E-value=0.013  Score=46.78  Aligned_cols=39  Identities=15%  Similarity=0.341  Sum_probs=34.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK   45 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~   45 (255)
                      ...+|+.++|+|.|+ ||+|..++..|++.|. +++++|.+
T Consensus        15 ~q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        15 IVQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            345788999999998 7899999999999999 49999987

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=96.79  E-value=0.0093  Score=47.50  Aligned_cols=37  Identities=24%  Similarity=0.453  Sum_probs=31.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK   45 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~   45 (255)
                      ++|++++|+|.|+ +|+|.++++.|+..|.. +.++|.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d   54 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDR   54 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECC
Confidence            5688999999975 55999999999999986 8888764

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=96.79  E-value=0.024  Score=42.13  Aligned_cols=78  Identities=21%  Similarity=0.399  Sum_probs=56.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHHc--CCeEEEEEec
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK-------------------QKNVDKAVEKLKAL--GIEVIGIICH   69 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~--~~~~~~~~~D   69 (255)
                      .++++|.|+ |++|..+++.|++.|.. +.++|.+                   ..+.+.+.+.+++.  ..++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            567888875 68999999999999985 8888763                   23456666677665  3577777777


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           70 VSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      + +++....+++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            7 4455555553       6899998765

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.78  E-value=0.0057  Score=51.46  Aligned_cols=38  Identities=29%  Similarity=0.273  Sum_probs=34.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      -+++||+++|.|.++-.|+.++..|+++|++|.++.|.
T Consensus       155 i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~  192 (283)
T PRK14192        155 IELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR  192 (283)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence            36899999999999999999999999999999988874

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.77  E-value=0.049  Score=44.65  Aligned_cols=105  Identities=18%  Similarity=0.251  Sum_probs=70.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   88 (255)
                      .|-++||--|+||+|..+++.+...|+.++.+..+.++.+-.+    ++|.+   ...|-+.++-    ++++.+.. | 
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak----enG~~---h~I~y~~eD~----v~~V~kiTngK  214 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK----ENGAE---HPIDYSTEDY----VDEVKKITNGK  214 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH----hcCCc---ceeeccchhH----HHHHHhccCCC
Confidence            4789999999999999999999999999999988887754433    33321   2345555444    44444422 4 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP  153 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~  153 (255)
                      ++|++.-..|...            +.               .-+..+++.|.+|-.+...+..+
T Consensus       215 GVd~vyDsvG~dt------------~~---------------~sl~~Lk~~G~mVSfG~asgl~~  252 (336)
T KOG1197|consen  215 GVDAVYDSVGKDT------------FA---------------KSLAALKPMGKMVSFGNASGLID  252 (336)
T ss_pred             Cceeeeccccchh------------hH---------------HHHHHhccCceEEEeccccCCCC
Confidence            5899988888532            11               12334567788888776665543

>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent

Probab=96.77  E-value=0.034  Score=48.87  Aligned_cols=117  Identities=15%  Similarity=0.057  Sum_probs=79.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-e----EEE----EeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-S----VVI----SSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-~----Vv~----~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~   78 (255)
                      .-+|.|+|++|.+|.+++..++..|. .    |++    ++++++.++...-++.+.-    .++. +..  .+.     
T Consensus        44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i~~--~~y-----  115 (387)
T TIGR01757        44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-IGI--DPY-----  115 (387)
T ss_pred             CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-Eec--CCH-----
Confidence            34899999999999999999998763 2    344    4889988888877776542    1111 111  111     


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        +    .+...|++|..||...  ++  ..+   -.+.+..|+.=.-.+.+.+.++-.+.+.|+.+|...
T Consensus       116 --~----~~kdaDIVVitAG~pr--kp--g~t---R~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsNPv  173 (387)
T TIGR01757       116 --E----VFEDADWALLIGAKPR--GP--GME---RADLLDINGQIFADQGKALNAVASKNCKVLVVGNPC  173 (387)
T ss_pred             --H----HhCCCCEEEECCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCcH
Confidence              1    1237999999999743  22  223   455688888877777777777655667788888654

This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=96.75  E-value=0.015  Score=50.12  Aligned_cols=102  Identities=16%  Similarity=0.169  Sum_probs=65.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..|++++|+|+ |++|..++..+...|++ |+++++++++.+..    ++.+.+..   .|..+++ .+++.+ +.. ..
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~----~~~ga~~~---i~~~~~~-~~~~~~-~~~-~~  230 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELA----KALGADFV---INSGQDD-VQEIRE-LTS-GA  230 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCEE---EcCCcch-HHHHHH-HhC-CC
Confidence            34899999975 89999999988889999 99999888765443    23343222   2333333 333222 111 12


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|+++.+.|...                          ..+..+..++++|+++.++..
T Consensus       231 ~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~  264 (339)
T cd08239         231 GADVAIECSGNTA--------------------------ARRLALEAVRPWGRLVLVGEG  264 (339)
T ss_pred             CCCEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEcCC
Confidence            6999999988421                          112334455678899988753

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=96.75  E-value=0.028  Score=49.81  Aligned_cols=92  Identities=26%  Similarity=0.350  Sum_probs=63.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.|++++|.|++ .||+.+++.+...|++|+++++++.+++...    ..|.+..       +.   ++.+       .
T Consensus       199 ~l~GktVvViG~G-~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~----~~G~~~~-------~~---~e~v-------~  256 (413)
T cd00401         199 MIAGKVAVVAGYG-DVGKGCAQSLRGQGARVIVTEVDPICALQAA----MEGYEVM-------TM---EEAV-------K  256 (413)
T ss_pred             CCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEECChhhHHHHH----hcCCEEc-------cH---HHHH-------c
Confidence            3689999999986 7999999999999999999999887654432    2343221       11   1111       2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ..|++|.+.|..                         -.+.+..+..+++++.+++++.
T Consensus       257 ~aDVVI~atG~~-------------------------~~i~~~~l~~mk~GgilvnvG~  290 (413)
T cd00401         257 EGDIFVTTTGNK-------------------------DIITGEHFEQMKDGAIVCNIGH  290 (413)
T ss_pred             CCCEEEECCCCH-------------------------HHHHHHHHhcCCCCcEEEEeCC
Confidence            579999887631                         1123445677888888888884

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK14967 putative methyltransferase; Provisional

Probab=96.74  E-value=0.049  Score=44.16  Aligned_cols=123  Identities=19%  Similarity=0.198  Sum_probs=73.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+.++|-.|+++|.   ++..+++.|+ +|++++.+++.++...+.++..+.++.++..|+.+.      +.     -+.
T Consensus        36 ~~~~vLDlGcG~G~---~~~~la~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~------~~-----~~~  101 (223)
T PRK14967         36 PGRRVLDLCTGSGA---LAVAAAAAGAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA------VE-----FRP  101 (223)
T ss_pred             CCCeEEEecCCHHH---HHHHHHHcCCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh------cc-----CCC
Confidence            36789999987654   3444555566 799999999888877777766666677777776431      11     147


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHH---hHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEIN---VKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n---~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +|.++.|..+.. .... ..........+..-   ....-.+++.+..+++++|+++++.+..
T Consensus       102 fD~Vi~npPy~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~  162 (223)
T PRK14967        102 FDVVVSNPPYVP-APPD-APPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL  162 (223)
T ss_pred             eeEEEECCCCCC-CCcc-cccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc
Confidence            999999987643 1111 00000011111110   1112345666777888999988776543

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=96.74  E-value=0.018  Score=51.22  Aligned_cols=98  Identities=22%  Similarity=0.265  Sum_probs=64.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.|++++|.|. |.||+.++..+...|++|+++++++.......    ..+.++       .+   ++.++       .
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~----~~G~~v-------~~---l~eal-------~  266 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA----MDGFRV-------MT---MEEAA-------E  266 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH----hcCCEe-------cC---HHHHH-------h
Confidence            468999999997 68999999999999999999999876543221    123221       12   12222       2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP  153 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~  153 (255)
                      ..|++|.+.|...                         .+....+..|++++.+++++.......
T Consensus       267 ~aDVVI~aTG~~~-------------------------vI~~~~~~~mK~GailiNvG~~d~Eid  306 (425)
T PRK05476        267 LGDIFVTATGNKD-------------------------VITAEHMEAMKDGAILANIGHFDNEID  306 (425)
T ss_pred             CCCEEEECCCCHH-------------------------HHHHHHHhcCCCCCEEEEcCCCCCccC
Confidence            6899988765210                         122345566777778888876654433

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.74  E-value=0.0081  Score=48.03  Aligned_cols=39  Identities=21%  Similarity=0.123  Sum_probs=34.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +.+++||++||.|| |.+|...++.|.+.|++|+++.+..
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~   43 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPEL   43 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCC
Confidence            45799999999998 8899999999999999999887753

>cd00300 LDH_like L-lactate dehydrogenase-like enzymes

Probab=96.70  E-value=0.025  Score=48.16  Aligned_cols=114  Identities=11%  Similarity=0.076  Sum_probs=76.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCe---EEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           15 AVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIE---VIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +.|.|+ |++|.+++..++..|  ..++++|++++.++....++.+.-..   ..+..+  .+.       +    .+..
T Consensus         1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~--~~~-------~----~l~~   66 (300)
T cd00300           1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRG--GDY-------A----DAAD   66 (300)
T ss_pred             CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEEC--CCH-------H----HhCC
Confidence            357786 679999999999988  56999999999888888888765221   111111  111       1    1237


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      .|++|.++|...  .+  ..+.   .+.+..|+.-...+.+.+.++- +.+.++++|....
T Consensus        67 aDiVIitag~p~--~~--~~~R---~~l~~~n~~i~~~~~~~i~~~~-p~~~viv~sNP~d  119 (300)
T cd00300          67 ADIVVITAGAPR--KP--GETR---LDLINRNAPILRSVITNLKKYG-PDAIILVVSNPVD  119 (300)
T ss_pred             CCEEEEcCCCCC--CC--CCCH---HHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccChHH
Confidence            999999999743  22  2233   4556777776666676666654 6678888886543

Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot

>cd08230 glucose_DH Glucose dehydrogenase

Probab=96.70  E-value=0.029  Score=48.76  Aligned_cols=98  Identities=23%  Similarity=0.331  Sum_probs=63.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK---QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++++|+|+ |++|...+..+...|++|++++|+   +++.+    .+++.|.+.    .|..++ .+.+    . ...
T Consensus       172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~----~~~~~Ga~~----v~~~~~-~~~~----~-~~~  236 (355)
T cd08230         172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD----IVEELGATY----VNSSKT-PVAE----V-KLV  236 (355)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH----HHHHcCCEE----ecCCcc-chhh----h-hhc
Confidence            6889999985 999999998777789999999984   33322    234456543    233322 2221    1 122


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +.+|++|.+.|...                          ..+.....++++|+++.++...
T Consensus       237 ~~~d~vid~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  272 (355)
T cd08230         237 GEFDLIIEATGVPP--------------------------LAFEALPALAPNGVVILFGVPG  272 (355)
T ss_pred             CCCCEEEECcCCHH--------------------------HHHHHHHHccCCcEEEEEecCC
Confidence            47999999998310                          1334455567889999887654

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.69  E-value=0.0092  Score=53.65  Aligned_cols=59  Identities=14%  Similarity=0.285  Sum_probs=44.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      +++|.|+ |.+|+++++.|.+.|+.|++++++++..++..+.     ..+.++.+|.+++..+++
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~-----~~~~~~~gd~~~~~~l~~   60 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR-----LDVRTVVGNGSSPDVLRE   60 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh-----cCEEEEEeCCCCHHHHHH
Confidence            5888887 9999999999999999999999998876655431     124455667766555444

>PLN02928 oxidoreductase family protein

Probab=96.67  E-value=0.0091  Score=51.87  Aligned_cols=110  Identities=16%  Similarity=0.196  Sum_probs=66.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..|.||++.|.|- |.||+++++.+...|++|+.++|+..........+....  +..+........+++.++.      
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~ell~------  225 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGD--VDDLVDEKGGHEDIYEFAG------  225 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCCCChhhhhhhcccccc--ccccccccCcccCHHHHHh------
Confidence            4689999999997 899999999999999999999987432111000000000  0000001112334444444      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       .-|+|+.+......                     ..-.+.+..+..|+++..+|+++-.
T Consensus       226 -~aDiVvl~lPlt~~---------------------T~~li~~~~l~~Mk~ga~lINvaRG  264 (347)
T PLN02928        226 -EADIVVLCCTLTKE---------------------TAGIVNDEFLSSMKKGALLVNIARG  264 (347)
T ss_pred             -hCCEEEECCCCChH---------------------hhcccCHHHHhcCCCCeEEEECCCc
Confidence             58999998876431                     1112235666778877788888743

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=96.66  E-value=0.045  Score=44.26  Aligned_cols=42  Identities=31%  Similarity=0.433  Sum_probs=36.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK   55 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~   55 (255)
                      ++.|.||+|.+|.++++.|++.|++|++.+|+++..+.....
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~   43 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK   43 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence            589999999999999999999999999999998887665543

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.64  E-value=0.011  Score=52.88  Aligned_cols=47  Identities=21%  Similarity=0.401  Sum_probs=40.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~   56 (255)
                      ++.+++++|.|+ |.+|+.+++.|...|+ .|++++|+.+..+.+.+++
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~  226 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF  226 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc
Confidence            478999999987 9999999999999998 6999999988776665543

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=96.64  E-value=0.024  Score=49.58  Aligned_cols=101  Identities=18%  Similarity=0.218  Sum_probs=63.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++|+|+ +++|...+......|+ .|+.+++++++++-.    ++.+.+..   .|..+++..++ +.++.  .++
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~~---i~~~~~~~~~~-i~~~~--~~g  259 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALA----RELGATAT---VNAGDPNAVEQ-VRELT--GGG  259 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH----HHcCCceE---eCCCchhHHHH-HHHHh--CCC
Confidence            4789999985 8999998888888899 588899888775533    23354322   23333322222 22221  136


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|++|.+.|..           +.               .+..+..++++|+++.++..
T Consensus       260 ~d~vid~~G~~-----------~~---------------~~~~~~~l~~~G~iv~~G~~  292 (371)
T cd08281         260 VDYAFEMAGSV-----------PA---------------LETAYEITRRGGTTVTAGLP  292 (371)
T ss_pred             CCEEEECCCCh-----------HH---------------HHHHHHHHhcCCEEEEEccC
Confidence            99999998842           11               22233445678899988753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=96.62  E-value=0.027  Score=49.02  Aligned_cols=77  Identities=17%  Similarity=0.209  Sum_probs=50.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   87 (255)
                      .++++||.|+ |++|...+......|+. |+.+++++++.+.+    ++.+.+..   .|..+++..+.    +.+..  
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~----~~~Ga~~~---i~~~~~~~~~~----i~~~~~~  243 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWA----REFGATHT---VNSSGTDPVEA----IRALTGG  243 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCceE---EcCCCcCHHHH----HHHHhCC
Confidence            4889999975 99999998888888996 88888888765444    23444322   23333332222    22222  


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      .++|+++.+.|.
T Consensus       244 ~g~d~vid~~g~  255 (358)
T TIGR03451       244 FGADVVIDAVGR  255 (358)
T ss_pred             CCCCEEEECCCC
Confidence            258999999884

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=96.61  E-value=0.0054  Score=55.61  Aligned_cols=73  Identities=14%  Similarity=0.238  Sum_probs=52.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++++++|+|+ ||+|++++..|++.|++|++++|+.++.++..+++.   ...    .+..   .+.        ...
T Consensus       329 ~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~---~~~----~~~~---~~~--------~l~  389 (477)
T PRK09310        329 PLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQ---GKA----FPLE---SLP--------ELH  389 (477)
T ss_pred             CcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---cce----echh---Hhc--------ccC
Confidence            567899999996 799999999999999999999999887766655431   111    1111   111        124


Q ss_pred             CCcEEEECCCCC
Q 025259           89 RIDVFVLNAAVN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      ..|++|++....
T Consensus       390 ~~DiVInatP~g  401 (477)
T PRK09310        390 RIDIIINCLPPS  401 (477)
T ss_pred             CCCEEEEcCCCC
Confidence            789999998753

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.61  E-value=0.012  Score=52.48  Aligned_cols=73  Identities=19%  Similarity=0.341  Sum_probs=52.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.+++++|.|+ |.+|..+++.|...| .+|++++|+.+..++..+++   +..  .+.     .+++...+.      
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~---g~~--~i~-----~~~l~~~l~------  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL---GGE--AVK-----FEDLEEYLA------  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCe--Eee-----HHHHHHHHh------
Confidence            578999999997 999999999999999 67999999987766655443   221  111     122222222      


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                       ..|++|.+.+.
T Consensus       240 -~aDvVi~aT~s  250 (417)
T TIGR01035       240 -EADIVISSTGA  250 (417)
T ss_pred             -hCCEEEECCCC
Confidence             58999998764

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=96.59  E-value=0.034  Score=47.29  Aligned_cols=117  Identities=16%  Similarity=0.159  Sum_probs=77.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |++|.+++..|+.++.  .++++|++++.++....++.+...   .-..+..| .+.       +.    +
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y-------~~----~   67 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGD-GDY-------ED----L   67 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecC-CCh-------hh----h
Confidence            46899999 9999999999988764  599999998777776666655321   11122222 111       11    1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ..-|++|..||....++    .+.   .+.++.|..=.-.+.+.+.+.- +++.++.++....
T Consensus        68 ~~aDiVvitAG~prKpG----mtR---~DLl~~Na~I~~~i~~~i~~~~-~d~ivlVvtNPvD  122 (313)
T COG0039          68 KGADIVVITAGVPRKPG----MTR---LDLLEKNAKIVKDIAKAIAKYA-PDAIVLVVTNPVD  122 (313)
T ss_pred             cCCCEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhhC-CCeEEEEecCcHH
Confidence            27999999999865333    334   4457888776666666666654 3566777765543

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=96.59  E-value=0.024  Score=50.87  Aligned_cols=41  Identities=29%  Similarity=0.311  Sum_probs=35.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNV   49 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~   49 (255)
                      ..+.||+++|.|.+ .||+.+++.+...|++|+++++++...
T Consensus       250 ~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~a  290 (476)
T PTZ00075        250 VMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPICA  290 (476)
T ss_pred             CCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence            36899999999977 599999999999999999998886543

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.59  E-value=0.02  Score=42.01  Aligned_cols=76  Identities=12%  Similarity=0.259  Sum_probs=56.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHH-cCCeEE-EEeCCh----------------------hHHHHHHHHHHHcCCeEEEEEec
Q 025259           14 VAVVTASTQGIGLGVAERLGL-EGASVV-ISSRKQ----------------------KNVDKAVEKLKALGIEVIGIICH   69 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~-~G~~Vv-~~~r~~----------------------~~~~~~~~~~~~~~~~~~~~~~D   69 (255)
                      +|+|.|++|-.|+.+++.+.+ .+..++ .++|+.                      ..+++..++     .+   +..|
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~-----~D---VvID   73 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE-----AD---VVID   73 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH------S---EEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc-----CC---EEEE
Confidence            589999999999999999998 688854 567776                      233333322     12   5679


Q ss_pred             CCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           70 VSNEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      +|.++.+...++...+.  ++.+++-+.|.
T Consensus        74 fT~p~~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   74 FTNPDAVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             ES-HHHHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             cCChHHhHHHHHHHHhC--CCCEEEECCCC
Confidence            99999999999998887  78899988886

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.57  E-value=0.044  Score=44.17  Aligned_cols=106  Identities=12%  Similarity=0.060  Sum_probs=70.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-------------cCCeEEEEEecCCCHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-------------LGIEVIGIICHVSNEQHRK   77 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~   77 (255)
                      .+.+||+.|++.|   .=+..||++|++|+.++.++..++...++-..             .+.++.++.+|+.+.+.  
T Consensus        34 ~~~rvLd~GCG~G---~da~~LA~~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~--  108 (213)
T TIGR03840        34 AGARVFVPLCGKS---LDLAWLAEQGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTA--  108 (213)
T ss_pred             CCCeEEEeCCCch---hHHHHHHhCCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCc--
Confidence            5679999999877   45677889999999999999988865332110             13467888899877432  


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                             +..+++|.++-.+....       .+++...+           .++.+..+++++|.+++++
T Consensus       109 -------~~~~~fD~i~D~~~~~~-------l~~~~R~~-----------~~~~l~~lLkpgG~~ll~~  152 (213)
T TIGR03840       109 -------ADLGPVDAVYDRAALIA-------LPEEMRQR-----------YAAHLLALLPPGARQLLIT  152 (213)
T ss_pred             -------ccCCCcCEEEechhhcc-------CCHHHHHH-----------HHHHHHHHcCCCCeEEEEE
Confidence                   11245788777655432       22333322           4566777788888755553

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.56  E-value=0.012  Score=47.93  Aligned_cols=74  Identities=19%  Similarity=0.276  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      .++|.| .|-+|..+|+.|.+.|++|++++++++..++..+.    ....+.+.+|-++++.++++=-      ...|++
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~----~~~~~~v~gd~t~~~~L~~agi------~~aD~v   70 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD----ELDTHVVIGDATDEDVLEEAGI------DDADAV   70 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh----hcceEEEEecCCCHHHHHhcCC------CcCCEE
Confidence            445555 56799999999999999999999999887764331    1257788899999887766511      257777


Q ss_pred             EECCC
Q 025259           94 VLNAA   98 (255)
Q Consensus        94 v~~ag   98 (255)
                      |-.-|
T Consensus        71 va~t~   75 (225)
T COG0569          71 VAATG   75 (225)
T ss_pred             EEeeC
Confidence            77666

>PLN00203 glutamyl-tRNA reductase

Probab=96.56  E-value=0.014  Score=53.37  Aligned_cols=76  Identities=16%  Similarity=0.206  Sum_probs=54.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.+++++|.|+ |.+|..++++|...|+ +|+++.|+.+..+.+.+++.  +..+.+     ...++....+       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~--g~~i~~-----~~~~dl~~al-------  327 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP--DVEIIY-----KPLDEMLACA-------  327 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC--CCceEe-----ecHhhHHHHH-------
Confidence            378999999999 9999999999999997 59999999988877766542  211211     1112222222       


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|+||.+.+.
T Consensus       328 ~~aDVVIsAT~s  339 (519)
T PLN00203        328 AEADVVFTSTSS  339 (519)
T ss_pred             hcCCEEEEccCC
Confidence            268999987764

>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1

Probab=96.55  E-value=0.0087  Score=46.94  Aligned_cols=44  Identities=18%  Similarity=0.363  Sum_probs=37.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA   58 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~   58 (255)
                      +|.|.|+ |.+|+.++..|+..|++|.+++++++.+++..+.++.
T Consensus         1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~   44 (180)
T PF02737_consen    1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIER   44 (180)
T ss_dssp             EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHH
T ss_pred             CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHH
Confidence            4778888 9999999999999999999999999998887777755

1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=96.54  E-value=0.013  Score=49.61  Aligned_cols=79  Identities=18%  Similarity=0.254  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|+|+++++|.++++.+...|++|+.+.++++..+..    ...+.+..   .+....+....+.+.. . ..++
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~-~-~~~~  209 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC----EALGADIA---INYREEDFVEVVKAET-G-GKGV  209 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCcEE---EecCchhHHHHHHHHc-C-CCCe
Confidence            588999999999999999999999999999998887665432    22333221   2333333333322221 1 1259


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.+++++|
T Consensus       210 d~~i~~~~  217 (325)
T TIGR02824       210 DVILDIVG  217 (325)
T ss_pred             EEEEECCc
Confidence            99999887

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.54  E-value=0.0008  Score=47.71  Aligned_cols=39  Identities=23%  Similarity=0.187  Sum_probs=33.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +.++++|++||.|| |.+|..-++.|++.|++|.+++...
T Consensus         2 ~l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    2 FLDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             EE--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            45789999999999 8999999999999999999998885

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.53  E-value=0.013  Score=50.14  Aligned_cols=73  Identities=19%  Similarity=0.337  Sum_probs=52.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.+++++|.|+ |.+|+.+++.|...|. .|++++|+.++.+++.+++   +..  ..     +.+++.+.+       .
T Consensus       176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~---g~~--~~-----~~~~~~~~l-------~  237 (311)
T cd05213         176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL---GGN--AV-----PLDELLELL-------N  237 (311)
T ss_pred             ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc---CCe--EE-----eHHHHHHHH-------h
Confidence            68999999987 9999999999998764 5889999988777766554   321  11     222233222       2


Q ss_pred             CCcEEEECCCCC
Q 025259           89 RIDVFVLNAAVN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      ..|++|.+.+..
T Consensus       238 ~aDvVi~at~~~  249 (311)
T cd05213         238 EADVVISATGAP  249 (311)
T ss_pred             cCCEEEECCCCC
Confidence            589999998853

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PLN02602 lactate dehydrogenase

Probab=96.52  E-value=0.072  Score=46.28  Aligned_cols=116  Identities=10%  Similarity=0.143  Sum_probs=77.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|.+++..++..|.  .++++|.+++.++....+++..-   ... -+..+ .+       .+.    +
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~d-------y~~----~  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TD-------YAV----T  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CC-------HHH----h
Confidence            69999996 9999999999998875  49999999988887777776642   111 12211 12       111    2


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ..-|++|.+||...  ++  ..+.   .+.+..|+.=.-.+.+.+.++ .+.+.+++++....
T Consensus       104 ~daDiVVitAG~~~--k~--g~tR---~dll~~N~~I~~~i~~~I~~~-~p~~ivivvtNPvd  158 (350)
T PLN02602        104 AGSDLCIVTAGARQ--IP--GESR---LNLLQRNVALFRKIIPELAKY-SPDTILLIVSNPVD  158 (350)
T ss_pred             CCCCEEEECCCCCC--Cc--CCCH---HHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecCchH
Confidence            37999999999743  22  2233   344677776666666666654 35667888876543

>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like

Probab=96.52  E-value=0.027  Score=44.86  Aligned_cols=38  Identities=16%  Similarity=0.397  Sum_probs=32.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK   45 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~   45 (255)
                      ..+|++.+|+|.|+++ +|.++++.|+..|.. +.++|.+
T Consensus        14 q~~L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d   52 (198)
T cd01485          14 QNKLRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHR   52 (198)
T ss_pred             HHHHhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECC
Confidence            3468889999998765 999999999999987 8888765

E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol

>cd05295 MDH_like Malate dehydrogenase-like

Probab=96.52  E-value=0.012  Score=52.52  Aligned_cols=115  Identities=11%  Similarity=0.069  Sum_probs=76.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc---CC----eEEEEeC--ChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLE---GA----SVVISSR--KQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~---G~----~Vv~~~r--~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~   78 (255)
                      .-+|+||||+|-||.++.-.+++-   |.    .++++|.  +.+.++...-++++.-    ..+.+ ..  .+.    .
T Consensus       123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~i-~~--~~~----e  195 (452)
T cd05295         123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGISV-TT--DLD----V  195 (452)
T ss_pred             ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcEE-EE--CCH----H
Confidence            347999999999999999999973   53    2667888  5777777777776542    11211 11  111    1


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                             .+...|++|..+|...  ++  ..   +-.+.++.|..=.-...+.+.++-.+..+|+.+.|
T Consensus       196 -------a~~daDvvIitag~pr--k~--G~---~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t  250 (452)
T cd05295         196 -------AFKDAHVIVLLDDFLI--KE--GE---DLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR  250 (452)
T ss_pred             -------HhCCCCEEEECCCCCC--Cc--CC---CHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence                   1237999999999743  22  22   34556888888777777777776554456666554

These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=96.51  E-value=0.032  Score=45.87  Aligned_cols=38  Identities=11%  Similarity=0.281  Sum_probs=32.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~   46 (255)
                      .+|++.+|+|.|+ ||+|..++..|++.|.. ++++|.+.
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD~D~   58 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLDFDT   58 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEeCCc
Confidence            4688999999976 59999999999999975 88887753

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.50  E-value=0.012  Score=42.27  Aligned_cols=71  Identities=23%  Similarity=0.240  Sum_probs=52.3

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEE
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv   94 (255)
                      ++|.|. +.+|+.+++.|.+.+..|++++++++..++..    +.+  +.++.+|.++++.++++--      .+.+.+|
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~----~~~--~~~i~gd~~~~~~l~~a~i------~~a~~vv   67 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELR----EEG--VEVIYGDATDPEVLERAGI------EKADAVV   67 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHH----HTT--SEEEES-TTSHHHHHHTTG------GCESEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHH----hcc--cccccccchhhhHHhhcCc------cccCEEE
Confidence            466676 57999999999997778999999998765544    334  5678899999988776522      2677777


Q ss_pred             ECCC
Q 025259           95 LNAA   98 (255)
Q Consensus        95 ~~ag   98 (255)
                      ....
T Consensus        68 ~~~~   71 (116)
T PF02254_consen   68 ILTD   71 (116)
T ss_dssp             EESS
T ss_pred             EccC
Confidence            7665

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=96.50  E-value=0.032  Score=46.80  Aligned_cols=101  Identities=16%  Similarity=0.212  Sum_probs=62.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..+++++|.|+ |++|...+..+...|+. |+++++++++++..    ++.+.+..+   |..+.   .+.+.++.. ..
T Consensus       119 ~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a----~~~Ga~~~i---~~~~~---~~~~~~~~~-~~  186 (280)
T TIGR03366       119 LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELA----LSFGATALA---EPEVL---AERQGGLQN-GR  186 (280)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHcCCcEec---Cchhh---HHHHHHHhC-CC
Confidence            36889999986 89999998888888997 88888777665332    334543222   22111   111222211 12


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .+|+++.+.|...                          ..+.+...++++|+++.++..
T Consensus       187 g~d~vid~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  220 (280)
T TIGR03366       187 GVDVALEFSGATA--------------------------AVRACLESLDVGGTAVLAGSV  220 (280)
T ss_pred             CCCEEEECCCChH--------------------------HHHHHHHHhcCCCEEEEeccC
Confidence            5899999988411                          123334556788999998754

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>PRK08655 prephenate dehydrogenase; Provisional

Probab=96.49  E-value=0.024  Score=50.89  Aligned_cols=39  Identities=23%  Similarity=0.308  Sum_probs=34.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      ++.|.||.|.+|.++++.|.+.|++|++++|+++...+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~   40 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEV   40 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHH
Confidence            689999999999999999999999999999987665443

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.48  E-value=0.0074  Score=44.43  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=52.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHH----------cCCeEEEEEecCCCHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKA----------LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      -++-|.|+ |.+|.++++.|.+.|+.|..+ .|+.+..++..+.+..          ...++.+  .-+.| +.+..+.+
T Consensus        11 l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~--iavpD-daI~~va~   86 (127)
T PF10727_consen   11 LKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVF--IAVPD-DAIAEVAE   86 (127)
T ss_dssp             -EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEE--E-S-C-CHHHHHHH
T ss_pred             cEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEE--EEech-HHHHHHHH
Confidence            36788887 889999999999999998765 6777666666555421          1223433  33444 37888888


Q ss_pred             HHHHH--cCCCcEEEECCCCCC
Q 025259           82 KTVEK--YGRIDVFVLNAAVNP  101 (255)
Q Consensus        82 ~~~~~--~g~~d~lv~~ag~~~  101 (255)
                      ++...  +.+=.+++|+.|-..
T Consensus        87 ~La~~~~~~~g~iVvHtSGa~~  108 (127)
T PF10727_consen   87 QLAQYGAWRPGQIVVHTSGALG  108 (127)
T ss_dssp             HHHCC--S-TT-EEEES-SS--
T ss_pred             HHHHhccCCCCcEEEECCCCCh
Confidence            88754  323369999999653

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=96.48  E-value=0.087  Score=45.00  Aligned_cols=113  Identities=14%  Similarity=0.093  Sum_probs=73.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++.|.|+ |.+|..++..|+..|  ..|++++++++..+....++....   ...... .  .+.       +    .+.
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~-~--~d~-------~----~l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIY-A--GDY-------A----DCK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEe-e--CCH-------H----HhC
Confidence            4788998 899999999999999  469999999887765555555431   111111 1  121       1    123


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|++|.++|...  .+  .   .+..+.+..|+.-.-.+.+.+..+- +.+.++.++...
T Consensus        67 ~aDiViita~~~~--~~--~---~~r~dl~~~n~~i~~~~~~~l~~~~-~~giiiv~tNP~  119 (308)
T cd05292          67 GADVVVITAGANQ--KP--G---ETRLDLLKRNVAIFKEIIPQILKYA-PDAILLVVTNPV  119 (308)
T ss_pred             CCCEEEEccCCCC--CC--C---CCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcH
Confidence            7999999999743  21  1   2234557777776666666666643 557777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=96.47  E-value=0.018  Score=56.61  Aligned_cols=78  Identities=17%  Similarity=0.185  Sum_probs=61.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-Ce-------------EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG-AS-------------VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G-~~-------------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      -+.|+|+|.|+ |.+|+..++.|++.+ +.             |.+++++.+..+++.+..    .++..++.|++|.++
T Consensus       567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~----~~~~~v~lDv~D~e~  641 (1042)
T PLN02819        567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGI----ENAEAVQLDVSDSES  641 (1042)
T ss_pred             ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhc----CCCceEEeecCCHHH
Confidence            45789999997 999999999998753 33             788899988777665543    245678899999988


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCC
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      +.++++       .+|+||++...
T Consensus       642 L~~~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        642 LLKYVS-------QVDVVISLLPA  658 (1042)
T ss_pred             HHHhhc-------CCCEEEECCCc
Confidence            777665       59999998874

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.46  E-value=0.021  Score=51.31  Aligned_cols=77  Identities=19%  Similarity=0.262  Sum_probs=51.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|+++|+|.+ ++|.++++.|++.|+.|++.+......  ...+++.....+.+...... +.    .+       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~--~~~~l~~~~~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPE--RVAQIGKMFDGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCch--hHHHHhhccCCcEEEeCCCC-HH----HH-------hC
Confidence            678999999986 899999999999999999998765431  12334432112333332221 11    11       26


Q ss_pred             CcEEEECCCCCC
Q 025259           90 IDVFVLNAAVNP  101 (255)
Q Consensus        90 ~d~lv~~ag~~~  101 (255)
                      .|.||...|+..
T Consensus        68 ~d~vv~spgi~~   79 (445)
T PRK04308         68 FDILALSPGISE   79 (445)
T ss_pred             CCEEEECCCCCC
Confidence            899999999853

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=96.46  E-value=0.045  Score=47.55  Aligned_cols=82  Identities=18%  Similarity=0.281  Sum_probs=49.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++||+| ++++|.+++......|+ +|++++++++..+.+    ++.+.+..+..-+.... .+...+.+... ...
T Consensus       177 ~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~----~~~g~~~vi~~~~~~~~-~~~~~i~~~~~-~~~  249 (361)
T cd08231         177 AGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELA----REFGADATIDIDELPDP-QRRAIVRDITG-GRG  249 (361)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCCeEEcCcccccH-HHHHHHHHHhC-CCC
Confidence            688999997 59999999988888899 899888877665433    23343222211111111 11111222211 125


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|+++.+.|.
T Consensus       250 ~d~vid~~g~  259 (361)
T cd08231         250 ADVVIEASGH  259 (361)
T ss_pred             CcEEEECCCC
Confidence            8999999874

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=96.45  E-value=0.03  Score=43.63  Aligned_cols=32  Identities=16%  Similarity=0.240  Sum_probs=27.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ   46 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~   46 (255)
                      +|+|.|+ ||+|..+++.|++.|.. +.++|.+.
T Consensus         1 ~VlViG~-GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGA-GGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            3678875 89999999999999986 99998875

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=96.43  E-value=0.14  Score=44.03  Aligned_cols=122  Identities=15%  Similarity=0.096  Sum_probs=70.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +.+++.|.| +|.+|..++..++..|. .|+++|++++..+....++...    +....+ .. .+|.       +.   
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I-~~-~~d~-------~~---   71 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKV-IG-TNNY-------ED---   71 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEE-EE-CCCH-------HH---
Confidence            457999999 58899999999999995 7999999988654322222221    111111 11 1221       11   


Q ss_pred             HcCCCcEEEECCCCCCCCCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       +...|++|.++|....+.. -.+.+.   .+.+..|+.-...+.+.+.++. +.+.++++|....
T Consensus        72 -l~~aDiVI~tag~~~~~~~~~~~~~r---~~~l~~n~~i~~~i~~~i~~~~-p~a~~iv~sNP~d  132 (321)
T PTZ00082         72 -IAGSDVVIVTAGLTKRPGKSDKEWNR---DDLLPLNAKIMDEVAEGIKKYC-PNAFVIVITNPLD  132 (321)
T ss_pred             -hCCCCEEEECCCCCCCCCCCcCCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHH
Confidence             2379999999997542211 001122   4446666554333444433332 4557788776553

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=96.42  E-value=0.013  Score=45.14  Aligned_cols=85  Identities=11%  Similarity=0.098  Sum_probs=56.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------HHcCCeEEEEEecCCCHHHHHHHHHH--HH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-------KALGIEVIGIICHVSNEQHRKNLIDK--TV   84 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~--~~   84 (255)
                      +|-+.|- |-.|..++++|++.|+.|.+.+|+++..+++.++-       .+.-.+..++..-+.+.+++++++..  +.
T Consensus         3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~i~   81 (163)
T PF03446_consen    3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGENIL   81 (163)
T ss_dssp             EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTTHG
T ss_pred             EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhHHh
Confidence            5667776 79999999999999999999999998877765431       11001223445567888998888887  66


Q ss_pred             HHcCCCcEEEECCCC
Q 025259           85 EKYGRIDVFVLNAAV   99 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~   99 (255)
                      ....+=.++|.+...
T Consensus        82 ~~l~~g~iiid~sT~   96 (163)
T PF03446_consen   82 AGLRPGKIIIDMSTI   96 (163)
T ss_dssp             GGS-TTEEEEE-SS-
T ss_pred             hccccceEEEecCCc
Confidence            554445566666554

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=96.41  E-value=0.044  Score=47.35  Aligned_cols=101  Identities=17%  Similarity=0.177  Sum_probs=62.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++|+| ++++|..++......|+. |+.+++++++.+.+    ++.+.+.. +  |..+.. .+.+.+.. . -.+
T Consensus       160 ~g~~vlV~G-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~----~~~Ga~~~-i--~~~~~~-~~~~~~~~-~-~~~  228 (347)
T PRK10309        160 EGKNVIIIG-AGTIGLLAIQCAVALGAKSVTAIDINSEKLALA----KSLGAMQT-F--NSREMS-APQIQSVL-R-ELR  228 (347)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCceE-e--cCcccC-HHHHHHHh-c-CCC
Confidence            588999997 599999999888888997 67888888765543    23343322 2  222211 22222221 1 125


Q ss_pred             Cc-EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 ID-VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d-~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +| +++.++|...                          .+...+..++++|+++.++..
T Consensus       229 ~d~~v~d~~G~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  262 (347)
T PRK10309        229 FDQLILETAGVPQ--------------------------TVELAIEIAGPRAQLALVGTL  262 (347)
T ss_pred             CCeEEEECCCCHH--------------------------HHHHHHHHhhcCCEEEEEccC
Confidence            77 8888888411                          123344556788999988754

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=96.40  E-value=0.026  Score=47.21  Aligned_cols=107  Identities=18%  Similarity=0.297  Sum_probs=72.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      -+|++++|.||+|.+|+ ++=+||+ .|+.|+...-+.++..-+..++   |.+.   ..|--++..+..++.+...+  
T Consensus       152 k~geTv~VSaAsGAvGq-l~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~---G~d~---afNYK~e~~~~~aL~r~~P~--  222 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQ-LVGQFAKLMGCYVVGSAGSKEKVDLLKTKF---GFDD---AFNYKEESDLSAALKRCFPE--  222 (343)
T ss_pred             CCCCEEEEeeccchhHH-HHHHHHHhcCCEEEEecCChhhhhhhHhcc---CCcc---ceeccCccCHHHHHHHhCCC--
Confidence            36899999999999997 5556666 5999998888887655444432   3221   23444555566666654332  


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ  152 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~  152 (255)
                      .+|+.+-|.|..                           +.++.+..|+.++||+.-+-++.+.
T Consensus       223 GIDiYfeNVGG~---------------------------~lDavl~nM~~~gri~~CG~ISqYN  259 (343)
T KOG1196|consen  223 GIDIYFENVGGK---------------------------MLDAVLLNMNLHGRIAVCGMISQYN  259 (343)
T ss_pred             cceEEEeccCcH---------------------------HHHHHHHhhhhccceEeeeeehhcc
Confidence            699999999952                           2445666678889998877555543

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=96.39  E-value=0.022  Score=47.40  Aligned_cols=85  Identities=18%  Similarity=0.250  Sum_probs=67.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|-+++--||+|++|+++...-...|.+-+-+-|+.+..+++.++++..|.+-.+     ++++--.+-+.+...+++++
T Consensus       160 ~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~Vi-----Teeel~~~~~~k~~~~~~~p  234 (354)
T KOG0025|consen  160 KGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVI-----TEEELRDRKMKKFKGDNPRP  234 (354)
T ss_pred             CCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEe-----cHHHhcchhhhhhhccCCCc
Confidence            4789999999999999998877788999999999999999999999999865543     33333333344444466789


Q ss_pred             cEEEECCCCC
Q 025259           91 DVFVLNAAVN  100 (255)
Q Consensus        91 d~lv~~ag~~  100 (255)
                      ..-+||.|.-
T Consensus       235 rLalNcVGGk  244 (354)
T KOG0025|consen  235 RLALNCVGGK  244 (354)
T ss_pred             eEEEeccCch
Confidence            9999999963

>PRK08223 hypothetical protein; Validated

Probab=96.39  E-value=0.024  Score=47.67  Aligned_cols=39  Identities=15%  Similarity=0.153  Sum_probs=33.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ   46 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~   46 (255)
                      ..+|++.+|+|.|+ ||+|..++..|+..|.. +.++|.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~D~   61 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADFDV   61 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence            35688999999976 58999999999999986 88888753

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.39  E-value=0.017  Score=48.86  Aligned_cols=81  Identities=22%  Similarity=0.265  Sum_probs=53.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++++|+|+++++|.+++..+...|++|+.++++++..+.+ .   ..+.+. ++  |....+....+.+.. . ...
T Consensus       143 ~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~---~~g~~~-~~--~~~~~~~~~~~~~~~-~-~~~  213 (328)
T cd08268         143 RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-L---ALGAAH-VI--VTDEEDLVAEVLRIT-G-GKG  213 (328)
T ss_pred             CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-H---HcCCCE-EE--ecCCccHHHHHHHHh-C-CCC
Confidence            3588999999999999999999999999999999887665544 2   223221 12  222222222222221 1 125


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|.++++.|.
T Consensus       214 ~d~vi~~~~~  223 (328)
T cd08268         214 VDVVFDPVGG  223 (328)
T ss_pred             ceEEEECCch
Confidence            9999998873

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=96.37  E-value=0.14  Score=43.75  Aligned_cols=116  Identities=14%  Similarity=0.091  Sum_probs=76.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC-----CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG-----IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +|.|.|+ |.+|.++|..|+..+.  .++++|.+++.++....++....     .++.+..   .+       .+.    
T Consensus         1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~-------y~~----   65 (307)
T cd05290           1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD-------YDD----   65 (307)
T ss_pred             CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC-------HHH----
Confidence            3678898 9999999999998875  49999999988888777776631     1232222   22       122    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +...|++|..||...  ++-  .+. +-.+.+..|..=.-.+.+.+.++- +.+.++.+|....
T Consensus        66 ~~~aDivvitaG~~~--kpg--~tr-~R~dll~~N~~I~~~i~~~i~~~~-p~~i~ivvsNPvD  123 (307)
T cd05290          66 CADADIIVITAGPSI--DPG--NTD-DRLDLAQTNAKIIREIMGNITKVT-KEAVIILITNPLD  123 (307)
T ss_pred             hCCCCEEEECCCCCC--CCC--CCc-hHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEecCcHH
Confidence            237999999999743  221  221 134557777766666666666554 5567777776543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN02494 adenosylhomocysteinase

Probab=96.35  E-value=0.051  Score=48.77  Aligned_cols=92  Identities=24%  Similarity=0.396  Sum_probs=62.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +.||+++|.|.+ .||+.+++.+...|++|+++++++.......    ..+..+  .     +   ++.++.       .
T Consensus       252 LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~----~~G~~v--v-----~---leEal~-------~  309 (477)
T PLN02494        252 IAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPICALQAL----MEGYQV--L-----T---LEDVVS-------E  309 (477)
T ss_pred             cCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchhhHHHH----hcCCee--c-----c---HHHHHh-------h
Confidence            689999999987 8999999999999999999999875432221    123221  1     1   122222       5


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .|++|.+.|...                         .+....+..|++++.+++++..
T Consensus       310 ADVVI~tTGt~~-------------------------vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        310 ADIFVTTTGNKD-------------------------IIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             CCEEEECCCCcc-------------------------chHHHHHhcCCCCCEEEEcCCC
Confidence            799998666321                         1124456678888889988763

>PRK05600 thiamine biosynthesis protein ThiF; Validated

Probab=96.35  E-value=0.043  Score=48.12  Aligned_cols=37  Identities=16%  Similarity=0.376  Sum_probs=32.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK   45 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~   45 (255)
                      .+|++.+|+|.|+ ||+|..++..|+..|. ++.++|.+
T Consensus        37 ~~l~~~~VliiG~-GglG~~v~~~La~~Gvg~i~ivD~D   74 (370)
T PRK05600         37 ERLHNARVLVIGA-GGLGCPAMQSLASAGVGTITLIDDD   74 (370)
T ss_pred             HHhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCC
Confidence            4688999999986 6999999999999997 58888875

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.35  E-value=0.012  Score=44.03  Aligned_cols=40  Identities=25%  Similarity=0.281  Sum_probs=36.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .+++||+++|.|.+.-+|+.++..|.++|+.|..+.++..
T Consensus        24 ~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~   63 (140)
T cd05212          24 VRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTI   63 (140)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCc
Confidence            3789999999999999999999999999999999987553

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.34  E-value=0.029  Score=50.95  Aligned_cols=77  Identities=23%  Similarity=0.186  Sum_probs=54.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++++++|.|+ |++|.++|+.|++.|+.|.++++... ..+...+.+++.|.++..  .+-..             ..
T Consensus        13 ~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~--~~~~~-------------~~   76 (480)
T PRK01438         13 DWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRL--GPGPT-------------LP   76 (480)
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEE--CCCcc-------------cc
Confidence            567899999997 67999999999999999999986643 334445667666654432  22111             01


Q ss_pred             CCCcEEEECCCCCC
Q 025259           88 GRIDVFVLNAAVNP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|.+|...|+..
T Consensus        77 ~~~D~Vv~s~Gi~~   90 (480)
T PRK01438         77 EDTDLVVTSPGWRP   90 (480)
T ss_pred             CCCCEEEECCCcCC
Confidence            25899999999743

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=96.34  E-value=0.06  Score=46.59  Aligned_cols=100  Identities=20%  Similarity=0.251  Sum_probs=65.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   87 (255)
                      .+++++|+|+ +++|..+++.+...|+ .|++++++++..+.+    .+.+.+..   .|..+.+..    +++.+..  
T Consensus       172 ~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~----~~~ga~~~---i~~~~~~~~----~~l~~~~~~  239 (351)
T cd08233         172 PGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELA----EELGATIV---LDPTEVDVV----AEVRKLTGG  239 (351)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCEE---ECCCccCHH----HHHHHHhCC
Confidence            5889999985 8999999988888999 688888887765443    22344322   233333322    2232222  


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +.+|.++.+.|..           +               ..+.....+++.|+++.++..
T Consensus       240 ~~~d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~  274 (351)
T cd08233         240 GGVDVSFDCAGVQ-----------A---------------TLDTAIDALRPRGTAVNVAIW  274 (351)
T ss_pred             CCCCEEEECCCCH-----------H---------------HHHHHHHhccCCCEEEEEccC
Confidence            2499999998841           0               223445556778899988764

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=96.33  E-value=0.054  Score=47.25  Aligned_cols=97  Identities=15%  Similarity=0.180  Sum_probs=61.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++|.|+ |++|..++......|++|++++.+.++.....   ++.|.+..+   |..+.+.+.       +..+.+
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~---~~~Ga~~vi---~~~~~~~~~-------~~~~~~  248 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAI---NRLGADSFL---VSTDPEKMK-------AAIGTM  248 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHH---HhCCCcEEE---cCCCHHHHH-------hhcCCC
Confidence            5889999765 89999998888888999888877765443332   233543222   233332222       222468


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      |++|.+.|..           .               ..+.....++++|+++.++.
T Consensus       249 D~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~vG~  279 (360)
T PLN02586        249 DYIIDTVSAV-----------H---------------ALGPLLGLLKVNGKLITLGL  279 (360)
T ss_pred             CEEEECCCCH-----------H---------------HHHHHHHHhcCCcEEEEeCC
Confidence            9999988831           1               11233445678899998864

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=96.31  E-value=0.046  Score=40.95  Aligned_cols=77  Identities=14%  Similarity=0.239  Sum_probs=49.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEEEEecCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALG--IEVIGIICHVS   71 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~~~D~~   71 (255)
                      +++|.|+ ||+|.++++.|++.|.. +.++|.+.                   .+.+.+.+.+++.+  .++..+..++.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~~p~v~i~~~~~~~~   79 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNELNPGVNVTAVPEGIS   79 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHHCCCcEEEEEeeecC
Confidence            4788886 89999999999999985 88887641                   23444555555544  34555555554


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           72 NEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ....        .+.+.+.|++|.+..-
T Consensus        80 ~~~~--------~~~~~~~diVi~~~d~   99 (143)
T cd01483          80 EDNL--------DDFLDGVDLVIDAIDN   99 (143)
T ss_pred             hhhH--------HHHhcCCCEEEECCCC
Confidence            3222        1222478888887763

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=96.28  E-value=0.06  Score=47.28  Aligned_cols=75  Identities=23%  Similarity=0.263  Sum_probs=49.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|.|+ |++|...+......|+.|++++++.+...+..   ++.|.+..+   |..+++.+.       +..+.+
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a---~~lGa~~~i---~~~~~~~v~-------~~~~~~  243 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI---DRLGADSFL---VTTDSQKMK-------EAVGTM  243 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH---HhCCCcEEE---cCcCHHHHH-------HhhCCC
Confidence            5889999986 89999999888888999988888765432222   334543222   333332222       222468


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |+++.+.|.
T Consensus       244 D~vid~~G~  252 (375)
T PLN02178        244 DFIIDTVSA  252 (375)
T ss_pred             cEEEECCCc
Confidence            999999884

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.25  E-value=0.028  Score=50.49  Aligned_cols=78  Identities=17%  Similarity=0.150  Sum_probs=59.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +..++++|.|+ |.+|+.+++.|.+.|..|++++++++..++..++    +..+.++.+|.++++.++++-      ..+
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~----~~~~~~i~gd~~~~~~L~~~~------~~~  297 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE----LPNTLVLHGDGTDQELLEEEG------IDE  297 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH----CCCCeEEECCCCCHHHHHhcC------Ccc
Confidence            45788999999 9999999999999999999999998876655443    234567889999987765432      126


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      .|.+|.+..
T Consensus       298 a~~vi~~~~  306 (453)
T PRK09496        298 ADAFIALTN  306 (453)
T ss_pred             CCEEEECCC
Confidence            787775544

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=96.20  E-value=0.16  Score=40.41  Aligned_cols=105  Identities=10%  Similarity=0.083  Sum_probs=69.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.++++|-.|++.|.   .+..|++.|++|++++.+++.++...+.+...+. ++.+...|+.+..        .   -+
T Consensus        29 ~~~~~vLDiGcG~G~---~a~~La~~g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~~--------~---~~   94 (197)
T PRK11207         29 VKPGKTLDLGCGNGR---NSLYLAANGFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNLT--------F---DG   94 (197)
T ss_pred             CCCCcEEEECCCCCH---HHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhCC--------c---CC
Confidence            467889999988776   4577888899999999999888887776666543 3566666654321        1   13


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      .+|+++.+.....       .++++.           -.+++.+...++++|.++++.
T Consensus        95 ~fD~I~~~~~~~~-------~~~~~~-----------~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207         95 EYDFILSTVVLMF-------LEAKTI-----------PGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             CcCEEEEecchhh-------CCHHHH-----------HHHHHHHHHHcCCCcEEEEEE
Confidence            6898887755321       122222           235666777788899865543

>PRK06223 malate dehydrogenase; Reviewed

Probab=96.17  E-value=0.051  Score=46.34  Aligned_cols=116  Identities=16%  Similarity=0.158  Sum_probs=71.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++.|.|+ |.+|..++..++..|. .|+++|++++.++....++.+..    .... +.. .++.       +.    +
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~-i~~-~~d~-------~~----~   68 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTK-ITG-TNDY-------ED----I   68 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcE-EEe-CCCH-------HH----H
Confidence            57899998 8899999999999875 89999998887665444443321    1111 111 1121       11    2


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ...|++|.++|...  ++  ..+   -.+.+.-|+.-...+.+.+.+.. +.+.+|+++....
T Consensus        69 ~~aDiVii~~~~p~--~~--~~~---r~~~~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~d  123 (307)
T PRK06223         69 AGSDVVVITAGVPR--KP--GMS---RDDLLGINAKIMKDVAEGIKKYA-PDAIVIVVTNPVD  123 (307)
T ss_pred             CCCCEEEECCCCCC--Cc--CCC---HHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHH
Confidence            36899999999632  22  222   23445566665566666666554 4456777765543

>PRK15128 23S rRNA m(5)C1962 methyltransferase; Provisional

Probab=96.16  E-value=0.86  Score=40.40  Aligned_cols=154  Identities=14%  Similarity=0.074  Sum_probs=90.8

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQG-IGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~g-iG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++++|=.|+.+| ++.+    .+..|+ .|+.++.++..++...+.++..+.   ++.++.+|+.+      .+.+...
T Consensus       220 ~g~rVLDlfsgtG~~~l~----aa~~ga~~V~~VD~s~~al~~a~~N~~~Ngl~~~~v~~i~~D~~~------~l~~~~~  289 (396)
T PRK15128        220 ENKRVLNCFSYTGGFAVS----ALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFK------LLRTYRD  289 (396)
T ss_pred             CCCeEEEeccCCCHHHHH----HHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCcEEEEEccHHH------HHHHHHh
Confidence            5788887775544 3332    233555 699999999999888887776552   57888888742      2222222


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ..+++|++|.+.......       .+.+    .....+.-.+.+.+.++++++|.++..|... +.          +..
T Consensus       290 ~~~~fDlVilDPP~f~~~-------k~~l----~~~~~~y~~l~~~a~~lLk~gG~lv~~scs~-~~----------~~~  347 (396)
T PRK15128        290 RGEKFDVIVMDPPKFVEN-------KSQL----MGACRGYKDINMLAIQLLNPGGILLTFSCSG-LM----------TSD  347 (396)
T ss_pred             cCCCCCEEEECCCCCCCC-------hHHH----HHHHHHHHHHHHHHHHHcCCCeEEEEEeCCC-cC----------CHH
Confidence            234799999998865311       1222    1223345566677788888888888766432 11          123


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                      ....++...+.+.+..+++.....-+-|-|.
T Consensus       348 ~f~~~v~~aa~~~~~~~~~l~~~~~~~DhP~  378 (396)
T PRK15128        348 LFQKIIADAAIDAGRDVQFIEQFRQAADHPV  378 (396)
T ss_pred             HHHHHHHHHHHHcCCeEEEEEEcCCCCCCCC
Confidence            3444444444544445666655443444443

>PLN02827 Alcohol dehydrogenase-like

Probab=96.12  E-value=0.098  Score=45.98  Aligned_cols=79  Identities=22%  Similarity=0.299  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   88 (255)
                      .|+++||.|+ |++|...+......|+. |+++++++++.+..    ++.|.+..   .|..+. +.....+.++..  +
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a----~~lGa~~~---i~~~~~~~~~~~~v~~~~~--~  262 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKA----KTFGVTDF---INPNDLSEPIQQVIKRMTG--G  262 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcEE---EcccccchHHHHHHHHHhC--C
Confidence            5899999985 89999999888888985 77778777665433    33454322   233321 233333333321  3


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       263 g~d~vid~~G~  273 (378)
T PLN02827        263 GADYSFECVGD  273 (378)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=96.11  E-value=0.029  Score=42.96  Aligned_cols=38  Identities=26%  Similarity=0.259  Sum_probs=32.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR   44 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r   44 (255)
                      +..+|+||+++|.|| |.+|...++.|++.|++|.+++.
T Consensus         7 ~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp   44 (157)
T PRK06719          7 LMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP   44 (157)
T ss_pred             eEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence            446899999999986 57999999999999999988853

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=96.08  E-value=0.03  Score=47.56  Aligned_cols=79  Identities=22%  Similarity=0.284  Sum_probs=52.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+.+++|+|+++++|.+++..+...|+.|+.++++.+..+.+    .+.+.+..   .|..+.+..+.+.+..  ...++
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~----~~~g~~~~---~~~~~~~~~~~~~~~~--~~~~~  212 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV----RALGADVA---VDYTRPDWPDQVREAL--GGGGV  212 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCCEE---EecCCccHHHHHHHHc--CCCCc
Confidence            478999999999999999999989999999998887765443    22343221   2333333333322211  11259


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.++++.|
T Consensus       213 d~vl~~~g  220 (324)
T cd08244         213 TVVLDGVG  220 (324)
T ss_pred             eEEEECCC
Confidence            99999877

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>COG2263 Predicted RNA methylase [Translation, ribosomal structure and biogenesis]

Probab=96.08  E-value=0.17  Score=39.65  Aligned_cols=120  Identities=22%  Similarity=0.307  Sum_probs=83.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..+++||+|+=-|++.|+   ++...+..|+. |++++.+++.++-..+...+..+++.++.+|+++       +.   
T Consensus        40 ~~g~l~g~~V~DlG~GTG~---La~ga~~lGa~~V~~vdiD~~a~ei~r~N~~~l~g~v~f~~~dv~~-------~~---  106 (198)
T COG2263          40 LRGDLEGKTVLDLGAGTGI---LAIGAALLGASRVLAVDIDPEALEIARANAEELLGDVEFVVADVSD-------FR---  106 (198)
T ss_pred             HcCCcCCCEEEEcCCCcCH---HHHHHHhcCCcEEEEEecCHHHHHHHHHHHHhhCCceEEEEcchhh-------cC---
Confidence            4567899999999988776   22333445754 9999999999998888888878899999999986       22   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                         +++|.+|-|..... .  ..-.+..-++..+++.                                   ...|+.=|
T Consensus       107 ---~~~dtvimNPPFG~-~--~rhaDr~Fl~~Ale~s-----------------------------------~vVYsiH~  145 (198)
T COG2263         107 ---GKFDTVIMNPPFGS-Q--RRHADRPFLLKALEIS-----------------------------------DVVYSIHK  145 (198)
T ss_pred             ---CccceEEECCCCcc-c--cccCCHHHHHHHHHhh-----------------------------------heEEEeec
Confidence               47899999987654 2  2223344344443333                                   22355556


Q ss_pred             HHHHHHHHHHHHHhC
Q 025259          165 TALLGLTKALAAEMA  179 (255)
Q Consensus       165 aa~~~l~~~la~e~~  179 (255)
                      ++-..|.+..+.+.+
T Consensus       146 a~~~~f~~~~~~~~G  160 (198)
T COG2263         146 AGSRDFVEKFAADLG  160 (198)
T ss_pred             cccHHHHHHHHHhcC
Confidence            667777777777775

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=96.07  E-value=0.034  Score=47.35  Aligned_cols=77  Identities=23%  Similarity=0.167  Sum_probs=50.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|.|+++++|.+++......|++|+.+.+++++.+..    .+.+.+..   .|..+. . ...+.+..  .+.+
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~v---~~~~~~-~-~~~~~~~~--~~~~  214 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL----KKLGAKEV---IPREEL-Q-EESIKPLE--KQRW  214 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH----HHcCCCEE---EcchhH-H-HHHHHhhc--cCCc
Confidence            367999999999999999988888999999999888765444    23343222   122222 1 11222221  1358


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.++.+.|
T Consensus       215 d~vld~~g  222 (326)
T cd08289         215 AGAVDPVG  222 (326)
T ss_pred             CEEEECCc
Confidence            99988876

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=96.07  E-value=0.063  Score=46.95  Aligned_cols=79  Identities=19%  Similarity=0.267  Sum_probs=52.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|.++||+|+ |++|...+......|+ +|+.+++++++++..    .+.+.+..   .|..+ .+.+.+.+.++..  +
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a----~~~Ga~~~---i~~~~~~~~~~~~v~~~~~--~  254 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELA----KKLGATDC---VNPNDYDKPIQEVIVEITD--G  254 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCCeE---EcccccchhHHHHHHHHhC--C
Confidence            4889999975 8999999888888898 699999988776544    23354322   23332 2223332333322  3


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|++|.++|.
T Consensus       255 g~d~vid~~G~  265 (368)
T TIGR02818       255 GVDYSFECIGN  265 (368)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=96.06  E-value=0.053  Score=46.28  Aligned_cols=31  Identities=26%  Similarity=0.352  Sum_probs=26.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGAS-VVISSRK   45 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~   45 (255)
                      +|+|.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD~D   32 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIIDLD   32 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEcCC
Confidence            4788886 89999999999999986 8888764

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=96.06  E-value=0.032  Score=47.47  Aligned_cols=80  Identities=19%  Similarity=0.188  Sum_probs=52.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+.+++|.|+++++|.++++.....|+.|+.+.++.+..+.+.    +.+.+..+   +..+++..+. +.+... ..++
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~----~~g~~~~~---~~~~~~~~~~-i~~~~~-~~~~  209 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELR----ALGIGPVV---STEQPGWQDK-VREAAG-GAPI  209 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH----hcCCCEEE---cCCCchHHHH-HHHHhC-CCCC
Confidence            5889999999999999999988889999998888877654443    23432221   2222222222 222211 1259


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |+++.+.|.
T Consensus       210 d~v~d~~g~  218 (324)
T cd08292         210 SVALDSVGG  218 (324)
T ss_pred             cEEEECCCC
Confidence            999998884

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=96.04  E-value=0.083  Score=45.08  Aligned_cols=121  Identities=15%  Similarity=0.100  Sum_probs=74.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++.|.|+ |.+|..+|..++..|. +|+++|++++..+....++.+... .......++-..+.    +.    ....|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~-~~~~~~~i~~t~d~----~~----~~~aD   71 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP-VGGFDTKVTGTNNY----AD----TANSD   71 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh-ccCCCcEEEecCCH----HH----hCCCC
Confidence            46889997 8899999999999876 799999976644423222322111 00000111100011    11    13689


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY  151 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~  151 (255)
                      ++|.++|...  ++  +.+.   .+.+..|+.-...+.+.+.++. +.+.||++|.....
T Consensus        72 iVIitag~p~--~~--~~sR---~~l~~~N~~iv~~i~~~I~~~~-p~~~iIv~tNP~di  123 (305)
T TIGR01763        72 IVVITAGLPR--KP--GMSR---EDLLSMNAGIVREVTGRIMEHS-PNPIIVVVSNPLDA  123 (305)
T ss_pred             EEEEcCCCCC--Cc--CCCH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCcHHH
Confidence            9999999632  22  2233   3457888888888888888774 56778888876543

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=96.03  E-value=0.041  Score=46.99  Aligned_cols=79  Identities=20%  Similarity=0.259  Sum_probs=51.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..+.+++|.|+++.+|.+++......|+.|+.+.++++..+.+    +..+.+..   .+..++ ...+.+.+...  ..
T Consensus       138 ~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~v---~~~~~~-~~~~~~~~~~~--~~  207 (329)
T cd08250         138 KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL----KSLGCDRP---INYKTE-DLGEVLKKEYP--KG  207 (329)
T ss_pred             CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH----HHcCCceE---EeCCCc-cHHHHHHHhcC--CC
Confidence            3588999999999999999888888899999988887665443    23343222   222222 22222222221  35


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      +|.++++.|
T Consensus       208 vd~v~~~~g  216 (329)
T cd08250         208 VDVVYESVG  216 (329)
T ss_pred             CeEEEECCc
Confidence            899998877

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.02  E-value=0.021  Score=47.97  Aligned_cols=37  Identities=32%  Similarity=0.361  Sum_probs=34.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      +++||+++|+|.+.-+|+.++..|...|++|.++.+.
T Consensus       155 ~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        155 DLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            6899999999999999999999999999999988774

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=96.02  E-value=0.04  Score=47.35  Aligned_cols=86  Identities=17%  Similarity=0.236  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .++++||.|+++++|.++++.....|+.|+.+.++.+..++..+.+...+.+..+...+.+ .......+.....  +.+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~--~~~  222 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELR-SLLATELLKSAPG--GRP  222 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccc-cccHHHHHHHHcC--CCc
Confidence            5899999999999999999999899999888777654323333333344543322211110 0022222222211  258


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |.++.+.|.
T Consensus       223 d~vld~~g~  231 (341)
T cd08290         223 KLALNCVGG  231 (341)
T ss_pred             eEEEECcCc
Confidence            999998873

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=96.02  E-value=0.044  Score=46.19  Aligned_cols=80  Identities=19%  Similarity=0.275  Sum_probs=51.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++++|+|+++++|.+++..+...|+.|+.++++.+..+..    ...+.+..+   +..+.+..+.+ .+... ...+
T Consensus       139 ~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~---~~~~~~~~~~i-~~~~~-~~~~  209 (323)
T cd08241         139 PGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA----RALGADHVI---DYRDPDLRERV-KALTG-GRGV  209 (323)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH----HHcCCceee---ecCCccHHHHH-HHHcC-CCCc
Confidence            588999999999999999999999999999998887665443    223332221   22222222222 22111 1258


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |.++++.|.
T Consensus       210 d~v~~~~g~  218 (323)
T cd08241         210 DVVYDPVGG  218 (323)
T ss_pred             EEEEECccH
Confidence            999998874

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>PLN02740 Alcohol dehydrogenase-like

Probab=96.00  E-value=0.057  Score=47.44  Aligned_cols=79  Identities=19%  Similarity=0.234  Sum_probs=52.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   88 (255)
                      .|++++|.|+ |++|...+......|+ .|+.+++++++++...    +.+.+..+   |..++ +.+.+.+.++..  +
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~----~~Ga~~~i---~~~~~~~~~~~~v~~~~~--~  267 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGK----EMGITDFI---NPKDSDKPVHERIREMTG--G  267 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHH----HcCCcEEE---ecccccchHHHHHHHHhC--C
Confidence            5889999985 9999999998888899 5999999887765542    33543322   33322 123222333321  2


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       268 g~dvvid~~G~  278 (381)
T PLN02740        268 GVDYSFECAGN  278 (381)
T ss_pred             CCCEEEECCCC
Confidence            69999999984

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.98  E-value=0.72  Score=38.44  Aligned_cols=126  Identities=12%  Similarity=0.102  Sum_probs=77.2

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~-~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|.+||=.|++ |+...+++..+...| .|+.++.++..++.+.+.++..+. ++.++..|..+.          ....+
T Consensus        71 ~g~~VLDl~ag~G~kt~~la~~~~~~g-~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~----------~~~~~  139 (264)
T TIGR00446        71 PPERVLDMAAAPGGKTTQISALMKNEG-AIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVF----------GAAVP  139 (264)
T ss_pred             CcCEEEEECCCchHHHHHHHHHcCCCC-EEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHh----------hhhcc
Confidence            35677766655 555666666543344 799999999999999998887763 466666664321          11124


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHH---HHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVL---DKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .+|.++.++.... .+.+...+...|   .+.+..-..-...+++.+.+.++++|.+|+.+.+
T Consensus       140 ~fD~Vl~D~Pcsg-~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstcs  201 (264)
T TIGR00446       140 KFDAILLDAPCSG-EGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTCS  201 (264)
T ss_pred             CCCEEEEcCCCCC-CcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence            6999998876443 222221111111   1222223334456788888888999999977643

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=95.97  E-value=0.034  Score=45.16  Aligned_cols=122  Identities=16%  Similarity=0.194  Sum_probs=78.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +.|+++|=.|+++|   .+++.+|+.|++|..+|-+++.++..+.+..+.+..+.+.      ..    .++++....++
T Consensus        58 l~g~~vLDvGCGgG---~Lse~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~------~~----~~edl~~~~~~  124 (243)
T COG2227          58 LPGLRVLDVGCGGG---ILSEPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYR------QA----TVEDLASAGGQ  124 (243)
T ss_pred             CCCCeEEEecCCcc---HhhHHHHHCCCeeEEecCChHHHHHHHHhhhhccccccch------hh----hHHHHHhcCCC
Confidence            68999999999999   6899999999999999999999988877766665442221      11    23344444468


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +|+|++.==.-..+      ++              -.+++.+..+++++| ++++|.+.     ....+|..+-.+.+.
T Consensus       125 FDvV~cmEVlEHv~------dp--------------~~~~~~c~~lvkP~G-~lf~STin-----rt~ka~~~~i~~ae~  178 (243)
T COG2227         125 FDVVTCMEVLEHVP------DP--------------ESFLRACAKLVKPGG-ILFLSTIN-----RTLKAYLLAIIGAEY  178 (243)
T ss_pred             ccEEEEhhHHHccC------CH--------------HHHHHHHHHHcCCCc-EEEEeccc-----cCHHHHHHHHHHHHH
Confidence            99988864332101      11              225666777776654 55666553     344444444444433


Q ss_pred             H
Q 025259          170 L  170 (255)
Q Consensus       170 l  170 (255)
                      +
T Consensus       179 v  179 (243)
T COG2227         179 V  179 (243)
T ss_pred             H
Confidence            3

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=95.97  E-value=0.14  Score=43.89  Aligned_cols=100  Identities=16%  Similarity=0.218  Sum_probs=63.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++|.| ++.+|.+++..+...|++|+.+++++++.+.. .   +.+.+..   .+...++ ....+.+.    +.+
T Consensus       163 ~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~---~~g~~~~---i~~~~~~-~~~~~~~~----~~~  229 (333)
T cd08296         163 PGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-R---KLGAHHY---IDTSKED-VAEALQEL----GGA  229 (333)
T ss_pred             CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-H---HcCCcEE---ecCCCcc-HHHHHHhc----CCC
Confidence            578999999 89999999988888999999999987765443 2   3343222   1222222 22222222    368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |.++.+.|...                          ..+.....+++.|+++.++...
T Consensus       230 d~vi~~~g~~~--------------------------~~~~~~~~l~~~G~~v~~g~~~  262 (333)
T cd08296         230 KLILATAPNAK--------------------------AISALVGGLAPRGKLLILGAAG  262 (333)
T ss_pred             CEEEECCCchH--------------------------HHHHHHHHcccCCEEEEEecCC
Confidence            99998765211                          1223344556678888887643

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=95.93  E-value=0.13  Score=42.93  Aligned_cols=106  Identities=15%  Similarity=0.148  Sum_probs=66.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++||..|+++|.-...+........+|+.++.+++.++...+.....+ .++.++..|+.+..     +     ..+.
T Consensus        77 ~g~~VLDiG~G~G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~-----~-----~~~~  146 (272)
T PRK11873         77 PGETVLDLGSGGGFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALP-----V-----ADNS  146 (272)
T ss_pred             CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCC-----C-----CCCc
Confidence            58899999988865433333322233469999999998888777766554 35667777663311     0     1136


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      +|.++.+..... ..     +.              ..+++.+...++++|++++..
T Consensus       147 fD~Vi~~~v~~~-~~-----d~--------------~~~l~~~~r~LkpGG~l~i~~  183 (272)
T PRK11873        147 VDVIISNCVINL-SP-----DK--------------ERVFKEAFRVLKPGGRFAISD  183 (272)
T ss_pred             eeEEEEcCcccC-CC-----CH--------------HHHHHHHHHHcCCCcEEEEEE
Confidence            898887755432 11     01              234566777788888887643

>PRK14851 hypothetical protein; Provisional

Probab=95.93  E-value=0.07  Score=50.42  Aligned_cols=82  Identities=13%  Similarity=0.190  Sum_probs=56.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.| .||+|..++..|+..|.. +.++|.+.                   .+.+.+.+.+.+.+  .++..
T Consensus        39 ~kL~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~inP~~~I~~  117 (679)
T PRK14851         39 ERLAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSINPFLEITP  117 (679)
T ss_pred             HHHhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHhCCCCeEEE
Confidence            568899999998 679999999999999986 77776531                   23444555555543  46666


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +...++ ++.+..+++       .+|+||.+.-
T Consensus       118 ~~~~i~-~~n~~~~l~-------~~DvVid~~D  142 (679)
T PRK14851        118 FPAGIN-ADNMDAFLD-------GVDVVLDGLD  142 (679)
T ss_pred             EecCCC-hHHHHHHHh-------CCCEEEECCC
Confidence            666675 444444443       5788776554

>PRK07574 formate dehydrogenase; Provisional

Probab=95.92  E-value=0.066  Score=47.12  Aligned_cols=99  Identities=20%  Similarity=0.295  Sum_probs=64.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|+||++.|.|- |.||+++++.|...|++|+..+|.....+. .   ...+  +.       -..+++++++      
T Consensus       188 ~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~-~---~~~g--~~-------~~~~l~ell~------  247 (385)
T PRK07574        188 YDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEV-E---QELG--LT-------YHVSFDSLVS------  247 (385)
T ss_pred             eecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhh-H---hhcC--ce-------ecCCHHHHhh------
Confidence            4689999999987 669999999999999999999997632111 1   1111  11       1112334443      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ..|+|+.+.....          + =+.          .+.+..+..|+++..+|+++-.
T Consensus       248 -~aDvV~l~lPlt~----------~-T~~----------li~~~~l~~mk~ga~lIN~aRG  286 (385)
T PRK07574        248 -VCDVVTIHCPLHP----------E-TEH----------LFDADVLSRMKRGSYLVNTARG  286 (385)
T ss_pred             -cCCEEEEcCCCCH----------H-HHH----------HhCHHHHhcCCCCcEEEECCCC
Confidence             6899999887542          1 011          1235667778877778877643

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.91  E-value=0.25  Score=39.17  Aligned_cols=105  Identities=9%  Similarity=0.084  Sum_probs=67.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.+.++|-.|++.|.   .+..|++.|+.|+++|.++..++...+.....+.++....+|+....     +.      +
T Consensus        28 ~~~~~~vLDiGcG~G~---~a~~la~~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-----~~------~   93 (195)
T TIGR00477        28 TVAPCKTLDLGCGQGR---NSLYLSLAGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAAA-----LN------E   93 (195)
T ss_pred             cCCCCcEEEeCCCCCH---HHHHHHHCCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhcc-----cc------C
Confidence            3457789999986665   44566678999999999998888777666665555666666654211     11      3


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .+|+++.+.-...       .+.++..           .+.+.+...++++|.++.+
T Consensus        94 ~fD~I~~~~~~~~-------~~~~~~~-----------~~l~~~~~~LkpgG~lli~  132 (195)
T TIGR00477        94 DYDFIFSTVVFMF-------LQAGRVP-----------EIIANMQAHTRPGGYNLIV  132 (195)
T ss_pred             CCCEEEEeccccc-------CCHHHHH-----------HHHHHHHHHhCCCcEEEEE
Confidence            6898887654321       1222222           3456677778888985544

Part of a tellurite-reducing operon tehA and tehB

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=95.91  E-value=0.083  Score=44.64  Aligned_cols=77  Identities=18%  Similarity=0.250  Sum_probs=51.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++++|.|+++++|.++++.....|++|+.+.++++..+..    .+.+.+..+ . +  .. .....+.+.   ..+
T Consensus       141 ~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~-~-~--~~-~~~~~i~~~---~~~  208 (320)
T cd08243         141 QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL----KELGADEVV-I-D--DG-AIAEQLRAA---PGG  208 (320)
T ss_pred             CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCcEEE-e-c--Cc-cHHHHHHHh---CCC
Confidence            3588999999999999999999989999999888887654333    233432222 1 1  11 111112222   236


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      +|.++++.|
T Consensus       209 ~d~vl~~~~  217 (320)
T cd08243         209 FDKVLELVG  217 (320)
T ss_pred             ceEEEECCC
Confidence            999999887

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK13256 thiopurine S-methyltransferase; Reviewed

Probab=95.90  E-value=0.19  Score=40.79  Aligned_cols=143  Identities=10%  Similarity=0.074  Sum_probs=88.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-------------HcCCeEEEEEecCCCHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK-------------ALGIEVIGIICHVSNEQHRK   77 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~~~~   77 (255)
                      ++.+|||-|++.|.   =+..|+++|++|++++.++...+...++..             ..+.++.++.+|+-+...-.
T Consensus        43 ~~~rvLvPgCGkg~---D~~~LA~~G~~V~GvDlS~~Ai~~~~~e~~~~~~~~~~~~~~~~~~~~i~~~~gD~f~l~~~~  119 (226)
T PRK13256         43 DSSVCLIPMCGCSI---DMLFFLSKGVKVIGIELSEKAVLSFFSQNTINYEVIHGNDYKLYKGDDIEIYVADIFNLPKIA  119 (226)
T ss_pred             CCCeEEEeCCCChH---HHHHHHhCCCcEEEEecCHHHHHHHHHHcCCCcceecccccceeccCceEEEEccCcCCCccc
Confidence            46899999998764   356789999999999999998888755321             12457888899988642100


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCC
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~  157 (255)
                             +..+++|.|+-.+....       .+++...+           ..+.+..+++++++++.++=.  +....+.
T Consensus       120 -------~~~~~fD~VyDra~~~A-------lpp~~R~~-----------Y~~~l~~lL~pgg~llll~~~--~~~~~~G  172 (226)
T PRK13256        120 -------NNLPVFDIWYDRGAYIA-------LPNDLRTN-----------YAKMMLEVCSNNTQILLLVME--HDKKSQT  172 (226)
T ss_pred             -------cccCCcCeeeeehhHhc-------CCHHHHHH-----------HHHHHHHHhCCCcEEEEEEEe--cCCCCCC
Confidence                   12256888777666543       12332222           245566667778877666522  1222345


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCC
Q 025259          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG  190 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg  190 (255)
                      +.|+.+..-+..+       +++...+..+...
T Consensus       173 PPf~v~~~e~~~l-------f~~~~~i~~l~~~  198 (226)
T PRK13256        173 PPYSVTQAELIKN-------FSAKIKFELIDSK  198 (226)
T ss_pred             CCCcCCHHHHHHh-------ccCCceEEEeeec
Confidence            5677777444333       3445556666543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=95.88  E-value=0.085  Score=46.07  Aligned_cols=79  Identities=15%  Similarity=0.207  Sum_probs=53.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   88 (255)
                      .+.++||.|+ +++|...+..+...|+ .|+.+++++++++..    ++.+.+..   .|..+. +.+.+.+.++..  +
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~~~~~v~~~~~--~  255 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA----KKFGATDC---VNPKDHDKPIQQVLVEMTD--G  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHcCCCEE---EcccccchHHHHHHHHHhC--C
Confidence            4889999975 8999999998888999 599999998876543    23454322   233332 233333333322  3


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      ++|+++.+.|.
T Consensus       256 g~d~vid~~g~  266 (368)
T cd08300         256 GVDYTFECIGN  266 (368)
T ss_pred             CCcEEEECCCC
Confidence            69999999884

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=95.88  E-value=0.02  Score=46.66  Aligned_cols=37  Identities=24%  Similarity=0.399  Sum_probs=33.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe---EEEEeCC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS---VVISSRK   45 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~---Vv~~~r~   45 (255)
                      .++++++++|.|+ |+.|++++..|++.|..   +.+++|+
T Consensus        21 ~~l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~   60 (226)
T cd05311          21 KKIEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSK   60 (226)
T ss_pred             CCccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCC
Confidence            4689999999998 89999999999999985   9999998

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.87  E-value=0.019  Score=44.07  Aligned_cols=44  Identities=32%  Similarity=0.379  Sum_probs=34.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK   51 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~   51 (255)
                      -+++||+++|.|.+.-+|+.++..|.++|+.|.++....+.+++
T Consensus        32 ~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~   75 (160)
T PF02882_consen   32 IDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQE   75 (160)
T ss_dssp             -STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHH
T ss_pred             CCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccc
Confidence            36899999999999999999999999999999998776644433

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07877 hypothetical protein; Provisional

Probab=95.86  E-value=0.062  Score=51.03  Aligned_cols=81  Identities=19%  Similarity=0.252  Sum_probs=57.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCCh------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQ------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.|. | +|..++..|+..|.  +++++|.+.                  .+.+..++.+.+.+  .++..
T Consensus       103 ~~L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~inp~i~v~~  180 (722)
T PRK07877        103 ERLGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAELDPYLPVEV  180 (722)
T ss_pred             HHHhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHHCCCCEEEE
Confidence            4688999999999 4 99999999999994  588887642                  33444555555543  46666


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +...++ ++.++++++       .+|+||.|.-
T Consensus       181 ~~~~i~-~~n~~~~l~-------~~DlVvD~~D  205 (722)
T PRK07877        181 FTDGLT-EDNVDAFLD-------GLDVVVEECD  205 (722)
T ss_pred             EeccCC-HHHHHHHhc-------CCCEEEECCC
Confidence            666666 555555544       5788877765

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.86  E-value=0.022  Score=48.18  Aligned_cols=39  Identities=26%  Similarity=0.269  Sum_probs=36.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      +++||.+.|.|.++-+|+.++..|+++|+.|.++.+...
T Consensus       156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~  194 (301)
T PRK14194        156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST  194 (301)
T ss_pred             CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC
Confidence            789999999999999999999999999999999977654

>TIGR00936 ahcY adenosylhomocysteinase

Probab=95.84  E-value=0.071  Score=47.17  Aligned_cols=39  Identities=28%  Similarity=0.307  Sum_probs=34.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN   48 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~   48 (255)
                      .+.|++++|.|. |.||+.+++.+...|++|+++++++..
T Consensus       192 ~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r  230 (406)
T TIGR00936       192 LIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIR  230 (406)
T ss_pred             CCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhh
Confidence            378999999994 669999999999999999999988754

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>KOG3191 consensus Predicted N6-DNA-methyltransferase [Translation, ribosomal structure and biogenesis]

Probab=95.81  E-value=0.44  Score=37.16  Aligned_cols=121  Identities=8%  Similarity=0.113  Sum_probs=79.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .+.++=.|++||+-.+........+.....+|.|+..++.+.+..+..+.++.++++|+.+         -+..  +++|
T Consensus        44 ~~i~lEIG~GSGvvstfL~~~i~~~~~~latDiNp~A~~~Tl~TA~~n~~~~~~V~tdl~~---------~l~~--~~VD  112 (209)
T KOG3191|consen   44 PEICLEIGCGSGVVSTFLASVIGPQALYLATDINPEALEATLETARCNRVHIDVVRTDLLS---------GLRN--ESVD  112 (209)
T ss_pred             ceeEEEecCCcchHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhcCCccceeehhHHh---------hhcc--CCcc
Confidence            4567778999998888777776666667789999999999888888888888899988753         2222  5899


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc----cCCCeEEEEc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM----QKGSSVVFIS  146 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l----~~~~~iv~vs  146 (255)
                      +++.|.++..  .+..+...+.+...|.=-..| ..+++.++|.+    .++|.+..+.
T Consensus       113 vLvfNPPYVp--t~~~~i~~~~i~~a~aGG~~G-r~v~d~ll~~v~~iLSp~Gv~Ylv~  168 (209)
T KOG3191|consen  113 VLVFNPPYVP--TSDEEIGDEGIASAWAGGKDG-REVTDRLLPQVPDILSPRGVFYLVA  168 (209)
T ss_pred             EEEECCCcCc--CCcccchhHHHHHHHhcCcch-HHHHHHHHhhhhhhcCcCceEEeee
Confidence            9999999853  334444444444444322222 22344444433    3556544443

>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated

Probab=95.80  E-value=0.034  Score=47.01  Aligned_cols=45  Identities=16%  Similarity=0.267  Sum_probs=38.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA   58 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~   58 (255)
                      ++|.|.|+ |-+|..+|..|+..|+.|++.+++++.++...+.+.+
T Consensus         6 ~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~~   50 (286)
T PRK07819          6 QRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIEK   50 (286)
T ss_pred             cEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHH
Confidence            36888876 7999999999999999999999999998876666543

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=95.80  E-value=0.17  Score=44.06  Aligned_cols=98  Identities=16%  Similarity=0.183  Sum_probs=62.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++|.| +|++|...+......|+.|+.+++++++.+...+   ..|.+..+   +-.+.+.+.       +..+.+
T Consensus       180 ~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~---~~Ga~~~i---~~~~~~~~~-------~~~~~~  245 (357)
T PLN02514        180 SGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALE---HLGADDYL---VSSDAAEMQ-------EAADSL  245 (357)
T ss_pred             CCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH---hcCCcEEe---cCCChHHHH-------HhcCCC
Confidence            588999995 6999999988888889998888887765444332   34543222   222322221       112368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |+++.+.|...           .               .+..+..+++.|+++.++..
T Consensus       246 D~vid~~g~~~-----------~---------------~~~~~~~l~~~G~iv~~G~~  277 (357)
T PLN02514        246 DYIIDTVPVFH-----------P---------------LEPYLSLLKLDGKLILMGVI  277 (357)
T ss_pred             cEEEECCCchH-----------H---------------HHHHHHHhccCCEEEEECCC
Confidence            99999988311           1               12233445678899998764

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.77  E-value=0.073  Score=45.94  Aligned_cols=88  Identities=14%  Similarity=0.150  Sum_probs=54.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHH---HHHH--cCCeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE---KLKA--LGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~---~~~~--~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ..|+|+++.|.|. |.||+++++.|...|++|++.+++++.......   .+.+  ...++.++.+..+.. ....+-+.
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999976 679999999999999999999998754322111   1221  134677777666542 11112233


Q ss_pred             HHHHcCCCcEEEECCC
Q 025259           83 TVEKYGRIDVFVLNAA   98 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag   98 (255)
                      ..... +.+.++-|.+
T Consensus       220 ~l~~m-k~gavlIN~a  234 (330)
T PRK12480        220 MFDHV-KKGAILVNAA  234 (330)
T ss_pred             HHhcC-CCCcEEEEcC
Confidence            33322 4555555555

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.76  E-value=0.16  Score=44.86  Aligned_cols=116  Identities=16%  Similarity=0.217  Sum_probs=66.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEE-EEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++| .|+++||..++..+...|+.++ .+++++++++..    ++.|.+.    .+........+.+.++.. ...
T Consensus       185 ~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a----~~~Ga~~----v~~~~~~~~~~~v~~~~~-~~g  254 (393)
T TIGR02819       185 PGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA----RSFGCET----VDLSKDATLPEQIEQILG-EPE  254 (393)
T ss_pred             CCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH----HHcCCeE----EecCCcccHHHHHHHHcC-CCC
Confidence            5889999 5568999999888888899854 456665554333    3345432    222222222222222211 125


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|++|.+.|... .+...+.    ..       ...-..++..+..++++|+|+.++..
T Consensus       255 ~Dvvid~~G~~~-~~~~~~~----~~-------~~~~~~~~~~~~~~~~~G~i~~~G~~  301 (393)
T TIGR02819       255 VDCAVDCVGFEA-RGHGHDG----KK-------EAPATVLNSLMEVTRVGGAIGIPGLY  301 (393)
T ss_pred             CcEEEECCCCcc-ccccccc----cc-------cchHHHHHHHHHHhhCCCEEEEeeec
Confidence            899999999632 1111111    00       02223445556777889999998864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.75  E-value=0.14  Score=42.34  Aligned_cols=103  Identities=14%  Similarity=0.207  Sum_probs=70.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++.++|=.|++.|   .++..|++.|++|++++.+++.++...+.+.+.+  .++.++.+|+.+...   ..      .+
T Consensus        44 ~~~~vLDiGcG~G---~~a~~la~~g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~---~~------~~  111 (255)
T PRK11036         44 RPLRVLDAGGGEG---QTAIKLAELGHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQ---HL------ET  111 (255)
T ss_pred             CCCEEEEeCCCch---HHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhh---hc------CC
Confidence            4568888888777   3778888899999999999999988888777664  357777777654221   11      13


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .+|+++.+.....    +.  ++              ..+++.+...++++|.++.+
T Consensus       112 ~fD~V~~~~vl~~----~~--~~--------------~~~l~~~~~~LkpgG~l~i~  148 (255)
T PRK11036        112 PVDLILFHAVLEW----VA--DP--------------KSVLQTLWSVLRPGGALSLM  148 (255)
T ss_pred             CCCEEEehhHHHh----hC--CH--------------HHHHHHHHHHcCCCeEEEEE
Confidence            7899987654321    10  11              23456677778888887543

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=95.74  E-value=0.078  Score=45.33  Aligned_cols=80  Identities=21%  Similarity=0.274  Sum_probs=49.0

Q ss_pred             CCCEEEE-eCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVV-TASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlV-tG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+..++| +||++++|...+......|++|+.+++++++.+.+.    +.+.+..+   |..+++..+++ .++.. ..+
T Consensus       142 ~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~----~~g~~~~i---~~~~~~~~~~v-~~~~~-~~~  212 (324)
T cd08291         142 EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK----KIGAEYVL---NSSDPDFLEDL-KELIA-KLN  212 (324)
T ss_pred             CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----HcCCcEEE---ECCCccHHHHH-HHHhC-CCC
Confidence            4444544 599999999998877778999999988887655443    34543322   22232222222 22211 125


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|+++.+.|.
T Consensus       213 ~d~vid~~g~  222 (324)
T cd08291         213 ATIFFDAVGG  222 (324)
T ss_pred             CcEEEECCCc
Confidence            8999998873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=95.74  E-value=0.2  Score=43.21  Aligned_cols=81  Identities=23%  Similarity=0.239  Sum_probs=49.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (255)
                      .++++++|+| ++++|.+++..+...|+. |+.+.++++..+-+ .   +.+.+..   .|..+++. ..+.+++.+.. 
T Consensus       161 ~~g~~vlI~g-~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~---~~g~~~v---i~~~~~~~-~~~~~~~~~~~~  231 (343)
T cd05285         161 RPGDTVLVFG-AGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-K---ELGATHT---VNVRTEDT-PESAEKIAELLG  231 (343)
T ss_pred             CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-H---HcCCcEE---eccccccc-hhHHHHHHHHhC
Confidence            4589999986 589999998888888998 88888877664433 2   2233222   12222221 11122222222 


Q ss_pred             -CCCcEEEECCCC
Q 025259           88 -GRIDVFVLNAAV   99 (255)
Q Consensus        88 -g~~d~lv~~ag~   99 (255)
                       .++|+++.+.|.
T Consensus       232 ~~~~d~vld~~g~  244 (343)
T cd05285         232 GKGPDVVIECTGA  244 (343)
T ss_pred             CCCCCEEEECCCC
Confidence             249999999883

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=95.70  E-value=0.092  Score=45.83  Aligned_cols=79  Identities=18%  Similarity=0.293  Sum_probs=52.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g   88 (255)
                      .|.+++|.|+ +++|...++.....|+ .|+.+++++++.+.+    ++.|....+   |..+. +.+.+.+.++..  +
T Consensus       187 ~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~----~~~Ga~~~i---~~~~~~~~~~~~v~~~~~--~  256 (369)
T cd08301         187 KGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQA----KKFGVTEFV---NPKDHDKPVQEVIAEMTG--G  256 (369)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCceEE---cccccchhHHHHHHHHhC--C
Confidence            5889999985 8999998888888898 699999988765543    334543222   22221 234333443332  3


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      .+|+++.+.|.
T Consensus       257 ~~d~vid~~G~  267 (369)
T cd08301         257 GVDYSFECTGN  267 (369)
T ss_pred             CCCEEEECCCC
Confidence            69999999873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.048  Score=46.11  Aligned_cols=78  Identities=19%  Similarity=0.226  Sum_probs=55.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++||+++|.|-++-+|+.+++.|++.|+.|.++. |+.+ +++..   ++  .+  ++.+-+.+++.++..+       
T Consensus       155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~-l~e~~---~~--AD--IVIsavg~~~~v~~~~-------  219 (296)
T PRK14188        155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD-LPAVC---RR--AD--ILVAAVGRPEMVKGDW-------  219 (296)
T ss_pred             CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC-HHHHH---hc--CC--EEEEecCChhhcchhe-------
Confidence            68999999999999999999999999999999985 6543 32222   11  22  3445566666555433       


Q ss_pred             CCCcEEEECCCCCC
Q 025259           88 GRIDVFVLNAAVNP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      -+...+|-..|+..
T Consensus       220 lk~GavVIDvGin~  233 (296)
T PRK14188        220 IKPGATVIDVGINR  233 (296)
T ss_pred             ecCCCEEEEcCCcc
Confidence            25667777778754

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=95.69  E-value=0.077  Score=47.16  Aligned_cols=86  Identities=12%  Similarity=0.098  Sum_probs=51.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .|.+++|.|++|++|...+..+...|+   .|+.+++++++++...+.....    |.+..+  .|..+.+.+.+.+.++
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~--i~~~~~~~~~~~v~~~  252 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLY--VNPATIDDLHATLMEL  252 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEE--ECCCccccHHHHHHHH
Confidence            368999999999999998877666553   6999999998876654421110    222122  2333222233223322


Q ss_pred             HHHcCCCcEEEECCCC
Q 025259           84 VEKYGRIDVFVLNAAV   99 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~   99 (255)
                      .. ...+|.+|.+.|.
T Consensus       253 t~-g~g~D~vid~~g~  267 (410)
T cd08238         253 TG-GQGFDDVFVFVPV  267 (410)
T ss_pred             hC-CCCCCEEEEcCCC
Confidence            11 1258999998773

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>PRK08328 hypothetical protein; Provisional

Probab=95.68  E-value=0.037  Score=45.21  Aligned_cols=41  Identities=17%  Similarity=0.316  Sum_probs=33.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKN   48 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~   48 (255)
                      ..+|++++|+|.|+ ||+|.++++.|++.|.. +.++|.+.-+
T Consensus        22 q~~L~~~~VlIiG~-GGlGs~ia~~La~~Gvg~i~lvD~D~ve   63 (231)
T PRK08328         22 QEKLKKAKVAVVGV-GGLGSPVAYYLAAAGVGRILLIDEQTPE   63 (231)
T ss_pred             HHHHhCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCccC
Confidence            34688999999986 58999999999999986 8888876533

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.67  E-value=0.058  Score=36.70  Aligned_cols=36  Identities=39%  Similarity=0.609  Sum_probs=31.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSR   44 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r   44 (255)
                      .++++++++|.|. |+.|+.+++.|.+. +..|.+++|
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r   55 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR   55 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4588999999999 99999999999998 566888877

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=95.66  E-value=0.082  Score=46.65  Aligned_cols=73  Identities=15%  Similarity=0.155  Sum_probs=50.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.++++|+|++ .+|+.+++.+.+.|+.|+.++.++........      .  ..+..|..|.+.+.+++++.     ++
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~a------d--~~~~~~~~d~~~l~~~~~~~-----~i   76 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVA------H--RSHVIDMLDGDALRAVIERE-----KP   76 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhh------h--heEECCCCCHHHHHHHHHHh-----CC
Confidence            56799999875 68999999999999999999887643221111      1  13556777877766665532     57


Q ss_pred             cEEEECC
Q 025259           91 DVFVLNA   97 (255)
Q Consensus        91 d~lv~~a   97 (255)
                      |.++...
T Consensus        77 d~vi~~~   83 (395)
T PRK09288         77 DYIVPEI   83 (395)
T ss_pred             CEEEEee
Confidence            8777543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	255
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-49
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		2e-47
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		3e-20
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		1e-19
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		3e-19
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		3e-19
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		4e-19
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-18
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		3e-18
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		4e-18
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		7e-18
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-17
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		9e-17
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-16
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		2e-16
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		2e-16
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		2e-16
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		5e-16
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		6e-16
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		6e-16
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		9e-16
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		1e-15
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-15
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		1e-15
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-15
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-15
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-15
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-15
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		3e-15
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		3e-15
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		3e-15
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-15
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		5e-15
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		6e-15
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		8e-15
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-15
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-14
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		1e-14
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-14
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		2e-14
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		2e-14
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-14
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		2e-14
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		3e-14
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		3e-14
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-14
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-14
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		7e-14
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		9e-14
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		9e-14
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		9e-14
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		9e-14
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		9e-14
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		1e-13
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-13
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		1e-13
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-13
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		1e-13
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		1e-13
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		1e-13
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		2e-13
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		2e-13
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		2e-13
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		2e-13
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		3e-13
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		3e-13
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		3e-13
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		8e-13
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		8e-13
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-12
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		1e-12
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		1e-12
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-12
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-12
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		2e-12
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		3e-12
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-12
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		4e-12
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		7e-12
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		1e-11
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		1e-11
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-11
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		1e-11
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		2e-11
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		2e-11
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-11
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		3e-11
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-11
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		3e-11
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-11
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-11
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		4e-11
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		7e-11
4imr_A	275	Crystal Structure Of 3-oxoacyl (acyl-carrier-protei		7e-11
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		7e-11
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		9e-11
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-10
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		1e-10
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		1e-10
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		2e-10
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		2e-10
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		2e-10
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-10
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-10
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		2e-10
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		2e-10
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-10
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		3e-10
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		4e-10
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		5e-10
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		7e-10
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		7e-10
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		1e-09
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		1e-09
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		1e-09
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-09
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		2e-09
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		2e-09
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		2e-09
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		2e-09
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-09
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		3e-09
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		3e-09
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		4e-09
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		4e-09
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		5e-09
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		5e-09
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		5e-09
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		6e-09
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		8e-09
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-09
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		8e-09
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		1e-08
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-08
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		2e-08
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-08
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		4e-08
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		5e-08
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		7e-08
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-07
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		2e-07
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-07
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		3e-07
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		3e-07
3sc4_A	285	Crystal Structure Of A Short Chain Dehydrogenase (A		3e-07
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		3e-07
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		4e-07
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		4e-07
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		7e-07
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		7e-07
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		1e-06
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-06
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		1e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-06
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		1e-06
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		1e-06
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		1e-06
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		1e-06
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		1e-06
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		1e-06
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		1e-06
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		1e-06
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		1e-06
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		1e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		2e-06
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-06
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		2e-06
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		3e-06
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		3e-06
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-06
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		4e-06
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		5e-06
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		5e-06
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		6e-06
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		7e-06
1zmo_A	244	Apo Structure Of Haloalcohol Dehalogenase Hhea Of A		8e-06
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		9e-06
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		1e-05
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		1e-05
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		1e-05
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		1e-05
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-05
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		2e-05
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		2e-05
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		2e-05
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		2e-05
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		2e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		2e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		2e-05
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		2e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		2e-05
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		2e-05
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		3e-05
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		3e-05
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		3e-05
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		3e-05
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		3e-05
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		5e-05
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		5e-05
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		5e-05
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		6e-05
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		7e-05
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		7e-05
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		1e-04
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-04
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-04
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-04
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-04
2hrb_A	274	Crystal Structure Of Human Carbonyl Reductase 3, Co		1e-04
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		1e-04
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-04
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-04
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		2e-04
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		2e-04
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-04
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		4e-04
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		5e-04
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		7e-04
3o26_A	311	The Structure Of Salutaridine Reductase From Papave		8e-04
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		8e-04
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		8e-04
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-04
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-04

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score =  191 bits (485), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 101/255 (39%), Positives = 147/255 (57%), Gaps = 3/255 (1%)
Query: 4   VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           V   K  + KVA+VTAST GIGL +A RL  +GA VV+SSRKQ+NVD+ V  L+  G+ V
Sbjct: 6   VERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSV 65
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
            G +CHV   + R+ L+   V  +G +D+ V NAAVNP+  +++   E V DK+  +NVK
Sbjct: 66  TGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVK 125
Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP- 180
           +++L+ +   P M+K  G SV+ +SS+  Y P   +  Y V              E+AP 
Sbjct: 126 ATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPR 185
Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
           + RVNC+APG + T+F+Q L  + A ++ ++    + RLG   +              YI
Sbjct: 186 NIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYI 245
Query: 241 TGETLVVAGGMASRL 255
           TGET+VV GG ASRL
Sbjct: 246 TGETVVVGGGTASRL 260

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score =  186 bits (471), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 144/260 (55%), Gaps = 5/260 (1%)
Query: 1   MEKVNMAKR--FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M    M +R     KVA+VTAST GIG  +A RL  +GA VV+SSRKQ+NVD+AV  L+ 
Sbjct: 2   MASSGMTRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQG 61
Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G+ V G +CHV   + R+ L+   V+ +G ID+ V NAAVNP+   ++   E V DK  
Sbjct: 62  EGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAVNPFFGSIMDVTEEVWDKTL 121
Query: 119 EINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXX 176
           +INVK+  L+ +   P M+K  G SVV +SSIA + P    + Y V              
Sbjct: 122 DINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAI 181
Query: 177 EMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX 235
           E+AP + RVNC+APG + T F++ L  +    ++++    + RLG   +           
Sbjct: 182 ELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLRIRRLGEPEDCAGIVSFLCSE 241
Query: 236 XXXYITGETLVVAGGMASRL 255
              YITGET+VV GG  SRL
Sbjct: 242 DASYITGETVVVGGGTPSRL 261

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 95.5 bits (236), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/241 (31%), Positives = 121/241 (50%), Gaps = 8/241 (3%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           VA+VT +  GIG  +A      GASVV++  K +  +     ++  G + IG+ C+V++E
Sbjct: 14  VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDE 73
Query: 74  QHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           QHR+ +I   ++++G+I V V NA    P   D+     S  +  +++N+ S   L Q A
Sbjct: 74  QHREAVIKAALDQFGKITVLVNNAGGGGPKPFDM---PMSDFEWAFKLNLFSLFRLSQLA 130
Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
           APHMQK  G +++ ISS+AG      MA YG               ++ P   RVN +AP
Sbjct: 131 APHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAP 190
Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAG 249
           G + T  A A +    + +A+   T L RLG   ++             +I+G+ L V+G
Sbjct: 191 GAIKTD-ALATVLTPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSG 249
Query: 250 G 250
           G
Sbjct: 250 G 250

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 114/247 (46%), Gaps = 7/247 (2%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
           + +GK A+VT S++G+G  +A +LG  GA++V++ S    ++D   E+ KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V N +  +N++   ++ +GRID+ V NA +      +LK  E   D +   N+KS+ L
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRDTL-MLKMSEKDWDDVLNTNLKSAYL 120
Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             +  +  M  QK   ++ I+SIAG    +  A Y                E A      
Sbjct: 121 CTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYC 180
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
           N VAPG + T     L   D V++       L R GT   +             YITG+ 
Sbjct: 181 NAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQV 238
Query: 245 LVVAGGM 251
           + + GG+
Sbjct: 239 INIDGGL 245

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 110/251 (43%), Gaps = 10/251 (3%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +R   K+AV+T +T GIGL  A+R   EGA V I+ R++  +D A+ +   +G   +GI 
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGGGAVGIQ 81
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
              +N      L +K   + GRIDV  +NA        L +  E   D  ++ NVK  + 
Sbjct: 82  ADSANLAELDRLYEKVKAEAGRIDVLFVNAG-GGSXLPLGEVTEEQYDDTFDRNVKGVLF 140
Query: 128 LMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            +Q A P + +GSSVV   S AG     A ++Y                ++     R+N 
Sbjct: 141 TVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINT 200
Query: 187 VAPGFVPTHFAQALLGNDAVRK-----ALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
           ++PG   T     L G D V++     AL  +    R+G    +             ++T
Sbjct: 201 LSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPXGRVGRAEEVAAAALFLASDDSSFVT 260
Query: 242 GETLVVAGGMA 252
           G  L V GG A
Sbjct: 261 GAELFVDGGSA 271

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 7/243 (2%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           K A+VT +++GIG  +A +L  EG +V ++ +  ++  +  VE++KA G++   I  +V+
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 70
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    K +I + V ++G +DV V NA +      L++ KE   D + + N+K     +Q 
Sbjct: 71  DADEVKAMIKEVVSQFGSLDVLVNNAGITRDNL-LMRMKEQEWDDVIDTNLKGVFNCIQK 129
Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P M  Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 130 ATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 189
Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVA 248
           PGF+ +    AL  +D +++ +  +  L R G   ++             YITG+T+ V 
Sbjct: 190 PGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 247
Query: 249 GGM 251
           GGM
Sbjct: 248 GGM 250

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 7/246 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT +++GIG  +A  L  +GA+VV++ +  ++  ++ V+++K LG + I +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+N +   N++ +TV+ +G++D+ V NA V      L++ KE   D +   N+K   L 
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKDNL-LMRMKEEEWDTVINTNLKGVFLC 120
Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            +  +  M  Q+   +V I+S+ G       A Y                E+A  +  VN
Sbjct: 121 TKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVN 180
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
            +APGF+ T     L  ++ ++  +       + G   ++             YITG+TL
Sbjct: 181 AIAPGFIATDMTDVL--DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL 238
Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 NVDGGM 244

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 117/255 (45%), Gaps = 10/255 (3%)
Query: 6   MAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           MA R+  +G  A+VT  ++GIG G+ E L   GASV   SR QK ++  + + ++ G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60
Query: 64  IGIICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
              +C +S+   R+ L++     + G++++ V NA +  Y      T E     +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINF 119
Query: 123 KSSILLMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
           +++  L   A P ++     +VVFISS++G       A+YG               E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179
Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALE---GKTLLNRLGTTGNMXXXXXXXXXXX 236
           D  RVN V PG + T   +  + +   ++ L     +  L R+G    +           
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239
Query: 237 XXYITGETLVVAGGM 251
             Y+TG+ + V GG+
Sbjct: 240 ASYVTGQIIYVDGGL 254

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 115/262 (43%), Gaps = 17/262 (6%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M+K+F GKV +VT +   IGL  A RL  EG ++ +    ++ ++KA   ++  G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
            +C V++E+     +D  V  +G+ID    NA      A +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
             +++  +  M  Q    +V  +S+AG + P  MA YG               ++AP + 
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180
Query: 183 RVNCVAPGFVPTHFA-------QALLGND-------AVRKALEGKTLLNRLGTTGNMXXX 228
           RVN ++PG++   F        QA +G+         V + + G   + R G    +   
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV 240
Query: 229 XXXXXXXXXXYITGETLVVAGG 250
                     ++TG  L +AGG
Sbjct: 241 VAFLLGDDSSFMTGVNLPIAGG 262

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 8/249 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +G  A+VT  ++GIG G+ E L   GASV   SR QK ++  + + ++ G +V   +C 
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCD 65
Query: 70  VSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +S+   R+ L++     + G++++ V NA +  Y      T E     +  IN +++  L
Sbjct: 66  LSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-YSLIMSINFEAAYHL 124
Query: 129 MQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVN 185
              A P ++     +VVFISS++G       A+YG               E A D  RVN
Sbjct: 125 SVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN 184
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALE---GKTLLNRLGTTGNMXXXXXXXXXXXXXYITG 242
            V PG + T   +  + +   ++ L     +  L R+G    +             Y+TG
Sbjct: 185 GVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTG 244
Query: 243 ETLVVAGGM 251
           + + V GG+
Sbjct: 245 QIIYVDGGL 253

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 15/254 (5%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVI 64
           M  + QGKV++VT ST+GIG  +AE+L   G++V+I+    +      E++    G++  
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----I 120
           G+  ++ +E+      ++       ID+ V NA +     D L  + S+LD  WE    +
Sbjct: 61  GVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGI---TRDKLFLRMSLLD--WEEVLKV 115
Query: 121 NVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM 178
           N+  + L+ Q++   M  Q+   +V ISS+ G+        Y                E+
Sbjct: 116 NLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKEL 175
Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXX 237
           AP +  VN VAPGF+ T     L  ++ +++  + +  L R G+   +            
Sbjct: 176 APRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELA 233
Query: 238 XYITGETLVVAGGM 251
            YITGE + V GGM
Sbjct: 234 SYITGEVIHVNGGM 247

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 37/257 (14%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--------I 61
             GK +++T ++ GIG  +A  L   G+ V+IS   +       EKLK+LG        I
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNE-------EKLKSLGNALKDNYTI 64
Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL--KTKESVLDKLWE 119
           EV    C+++N++   NLI KT      +D+ V NA +    +D L  + K+   DK+ +
Sbjct: 65  EV----CNLANKEECSNLISKT----SNLDILVCNAGI---TSDTLAIRMKDQDFDKVID 113
Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           IN+K++ +L ++A   M  ++   ++ ISSI G       A Y                E
Sbjct: 114 INLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYE 173
Query: 178 MAPDTR---VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXX 234
           +A  TR   VN VAPGF+ +     L  N+  R+A+  K  L   G   ++         
Sbjct: 174 VA--TRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLAS 229
Query: 235 XXXXYITGETLVVAGGM 251
               YITG+TL V GGM
Sbjct: 230 NNASYITGQTLHVNGGM 246

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 83.6 bits (205), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 16/191 (8%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVI 64
           +  G+VA++T    G+G  + +R   EGA V +       +DK+ E+L+ L    G   +
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAV-------LDKSAERLRELEVAHGGNAV 54
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA---ADLLKTK-ESVLDKLWEI 120
           G++  V + Q +K   ++ +  +G+ID  + NA +  Y+   ADL + K ++  D ++ +
Sbjct: 55  GVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHV 114
Query: 121 NVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
           NVK  I  ++   P +     SVVF  S AG+ P     +Y                E+A
Sbjct: 115 NVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA 174
Query: 180 PDTRVNCVAPG 190
           P  RVN VAPG
Sbjct: 175 PHVRVNGVAPG 185

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 117/254 (46%), Gaps = 13/254 (5%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +G  A+VT  ++GIG  + E L   GA V   SR +K +D+ +E  +  G+ V G +C 
Sbjct: 19  LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCD 78
Query: 70  VSNEQHRKNLIDKTVEKY-GRIDVFVLNAAV--NPYAADLLKTKESVLDKLWEINVKSSI 126
           + +   R  L+      + G++++ V NA V  +  A D  +   +++      N +++ 
Sbjct: 79  LLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG---TNFEAAY 135
Query: 127 LLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-R 183
            L Q A P ++  +  +V+F+SSIAG+    ++++Y                E A D  R
Sbjct: 136 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 195
Query: 184 VNCVAPGFVPTHFAQ-ALLGNDAVRKALEG---KTLLNRLGTTGNMXXXXXXXXXXXXXY 239
           VN VAPG + T   + A+  N   ++ ++    KT + R G    +             Y
Sbjct: 196 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 255
Query: 240 ITGETLVVAGGMAS 253
           ITG+ +   GG  +
Sbjct: 256 ITGQIIWADGGFTA 269

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 95/205 (46%), Gaps = 3/205 (1%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             G+VAVVT +++GIG  +A +LG  GA VV+++R  + +     ++ A G E     C 
Sbjct: 27  LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACD 86
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S+           +  +GR DV V NA V  +   L   K +  D L  +N+K+  LL+
Sbjct: 87  LSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLL 146
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +  AP M   K   ++ ISS+AG  P +  A Y                E+     RV+ 
Sbjct: 147 RAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSL 206
Query: 187 VAPGFVPTHFAQALLGNDAVRKALE 211
           VAPG V T F   L    +   A+E
Sbjct: 207 VAPGSVRTEFGVGLSAKKSALGAIE 231

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F+GK+A+VT +++GIG  +AE L   GA  VI +   +N  +A+     LG    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDY--LGANGKGLMLN 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++    +++++K   ++G +D+ V NA +      L++ K+   + + E N+ S   L 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ I S+ G       A Y                E+A     VN 
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 178
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  +D  R  +  +    RLG    +             YITGETL 
Sbjct: 179 VAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 247 VAGGM 251
           V GGM
Sbjct: 237 VNGGM 241

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 114/242 (47%), Gaps = 7/242 (2%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           K A+VT +++GIG  +A +L  EG +V ++ +  ++  +  VE++KA G++   I  +V+
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA 64
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    K  I + V ++G +DV V NA +      L + KE   D + + N+K     +Q 
Sbjct: 65  DADEVKAXIKEVVSQFGSLDVLVNNAGITRDNL-LXRXKEQEWDDVIDTNLKGVFNCIQK 123
Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           A P    Q+  +++ +SS+ G       A Y                E+A     VN VA
Sbjct: 124 ATPQXLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVNAVA 183
Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVA 248
           PGF+ +    AL  +D +++    +  L R G   ++             YITG+T+ V 
Sbjct: 184 PGFIVSDXTDAL--SDELKEQXLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTIHVN 241
Query: 249 GG 250
           GG
Sbjct: 242 GG 243

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F+GK+A+VT +++GIG  +AE L   GA  VI +   +N  +A+     LG    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDY--LGANGKGLMLN 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++    +++++K   ++G +D+ V NA +      L++ K+   + + E N+ S   L 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ I S+ G       A +                E+A     VN 
Sbjct: 119 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITVNV 178
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  +D  R  +  +    RLG    +             YITGETL 
Sbjct: 179 VAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 236
Query: 247 VAGGM 251
           V GGM
Sbjct: 237 VNGGM 241

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 1   MEKVNMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M     ++R+  + K  +VT  T+GIG  + E     GA +   +R +  +++ + K + 
Sbjct: 1   MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60
Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYG-RIDVFVLNAAVNPYAADLLKTKESVLDKL 117
            G +V G +C  S    R+ L+      +G ++D+ + N         L  T E     +
Sbjct: 61  KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHI 120
Query: 118 WEINVKSSILLMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXX 175
              N++S+  L Q A P ++     +++F+SSIAG    S  ++Y               
Sbjct: 121 -STNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179
Query: 176 XEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXX 234
            E A D  R N VAP  + T  A+A+  +D  +K +  +  L R G    +         
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238
Query: 235 XXXXYITGETLVVAGGM 251
               YITG+T+ V GG+
Sbjct: 239 PAASYITGQTICVDGGL 255

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 113/251 (45%), Gaps = 8/251 (3%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEINVKSSIL 127
            +++EQ    L D  + K G++D+ V NA    P   D+         + +E+NV S   
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMAD---FRRAYELNVFSFFH 124
Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
           L Q  AP M+K  G  ++ I+S+A       M  Y                ++   + RV
Sbjct: 125 LSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRV 184
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
           N +APG + T   ++++  +  +K L+  T + RLG   ++             +++G+ 
Sbjct: 185 NGIAPGAILTDALKSVITPEIEQKMLQ-HTPIRRLGQPQDIANAALFLCSPAASWVSGQI 243
Query: 245 LVVAGGMASRL 255
           L V+GG    L
Sbjct: 244 LTVSGGGVQEL 254

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 8/250 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIIC 68
            +G+VA+VT  ++G+G G+A+ L   G SVV++SR  +   +A +KL +  G+E +   C
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 78
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKSSIL 127
            VSN +  K L++   EK+G++D  V  A +N  + A+     E    ++ E+N+  +  
Sbjct: 79  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDE--FRQVIEVNLFGTYY 136
Query: 128 LMQDAAPHMQKGS--SVVFISSIAGYQPP-SAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
           + ++A   +++    S++ I S+   +     ++ Y                E      R
Sbjct: 137 VCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIR 196
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VN +APG+  T   +A+  +      +  +  L R G   ++             Y+TG+
Sbjct: 197 VNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQ 256
Query: 244 TLVVAGGMAS 253
            + V GG  +
Sbjct: 257 IIFVDGGWTA 266

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 16/250 (6%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIIC 68
            QG+  VVT  T+GIG G+A      GA+V ++ R   ++D  V  L  LG  +VIG+  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+      L  + VE++G IDV   NA V P A     T E  L+ ++ +NV  +   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQ-LNGIFAVNVNGTFYA 126
Query: 129 MQDAAPHM-QKGSSVVFISS-----IAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD- 181
           +Q     +   GS  V ++S     I GY      + YG               E+AP  
Sbjct: 127 VQACLDALIASGSGRVVLTSSITGPITGY---PGWSHYGATKAAQLGFMRTAAIELAPHK 183
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-LNRLGTTGNMXXXXXXXXXXXXXYI 240
             VN + PG + T   + LL N     A   +++    LGT  ++             YI
Sbjct: 184 ITVNAIMPGNIMT---EGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYI 240
Query: 241 TGETLVVAGG 250
           TG+ + V GG
Sbjct: 241 TGQAIAVDGG 250

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/245 (28%), Positives = 110/245 (44%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGMALN 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NAA+      L++ KE     + E N+ S   L 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAITRDNL-LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ + S+ G    +  A Y                E+A     VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  ND  R A   +    RLG    +             YITGETL 
Sbjct: 186 VAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 247 VAGGM 251
           V GGM
Sbjct: 244 VNGGM 248

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 6/250 (2%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M K    +VA+VT +++GIG  +A  L   GA V+ ++  +   +      K  G+E  
Sbjct: 21  SMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGR 80
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
           G + +V++      L++ T++++G ++V V NA +       ++ K+   D + + N+K+
Sbjct: 81  GAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQDQL-AMRMKDDEWDAVIDTNLKA 139
Query: 125 SILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-D 181
              L +     M K  G  +V I+S+ G         Y                E+    
Sbjct: 140 VFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRG 199
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
             VNCVAPGF+ T   + L      + AL+ +  L RLG+  ++             YIT
Sbjct: 200 ITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYIT 257
Query: 242 GETLVVAGGM 251
           G TL V GGM
Sbjct: 258 GTTLHVNGGM 267

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R K+   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVK 123
            +   V+ E    NL+   ++++G++DV + NA + NP ++  +   +   +K+ + N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLT 118
Query: 124 SSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + L  ++A  +  +     +V+ +SS+    P      Y                E AP
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
              RVN + PG + T        +   R  +E    +  +G    +             Y
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 240 ITGETLVVAGGM 251
           +TG TL   GGM
Sbjct: 239 VTGITLFADGGM 250

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R K+   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVK 123
            +   V+ E    NL+   ++++G++DV + NA + NP ++  +   +   +K+ + N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLT 118
Query: 124 SSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + L  ++A  +  +     +V+ +SS+    P      Y                E AP
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
              RVN + PG + T        +   R  +E    +  +G    +             Y
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 240 ITGETLVVAGGM 251
           +TG TL   GGM
Sbjct: 239 VTGITLFADGGM 250

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R K+   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVK 123
            +   V+ E    NL+   ++++G++DV + NA + NP ++  +   +   +K+ + N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSD--WNKVIDTNLT 118
Query: 124 SSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + L  ++A  +  +     +V+ +SS+    P      Y                E AP
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAP 178
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
              RVN + PG + T        +   R  +E    +  +G    +             Y
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 240 ITGETLVVAGGM 251
           +TG TL   GGM
Sbjct: 239 VTGITLFADGGM 250

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R K+   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVK 123
            +   V+ E    NL+   ++++G++DV + NA + NP ++  +   +   +K+ + N+ 
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLANPVSSHEMSLSD--WNKVIDTNLT 118
Query: 124 SSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + L  ++A  +  +     +V+ +SS+    P      Y                E AP
Sbjct: 119 GAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAP 178
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
              RVN + PG + T        +   R  +E    +  +G    +             Y
Sbjct: 179 KGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASY 238
Query: 240 ITGETLVVAGGM 251
           +TG TL   GGM
Sbjct: 239 VTGITLFADGGM 250

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VIG 65
           RF  KVA++T S+ GIG   A     EGA V I+ R  + +++  +++ A G+    V  
Sbjct: 3   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 62
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESV--LDKLWEINV 122
           ++  V+ +  +  ++  T+ K+G++D+ V NA A  P +     T +S+   D    +N+
Sbjct: 63  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 122
Query: 123 KSSILLMQDAAPHMQ--KGSSVVFISSIA-GYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
           +S I L + A PH+   KG  +V ISSIA G         Y +              ++ 
Sbjct: 123 RSVIALTKKAVPHLSSTKG-EIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181
Query: 180 PD-TRVNCVAPGFVPTHFAQAL 200
               RVN ++PG V T F  A+
Sbjct: 182 QHGIRVNSISPGLVATGFGSAM 203

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGMALN 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NA +      L++ KE     + E N+ S   L 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL-LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ + S+ G    +  A Y                E+A     VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  ND  R A   +    RLG    +             YITGETL 
Sbjct: 186 VAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 247 VAGGM 251
           V GGM
Sbjct: 244 VNGGM 248

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 78.6 bits (192), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/245 (24%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + KVA+VT + +GIG  +A+ L    + V+  SR QK+ D  V+++K+ G E  G    V
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDV 102
Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           S ++    +I+K + ++  +D+ V NA +       L+ K    + +   N+ S   + Q
Sbjct: 103 SKKEEISEVINKILTEHKNVDILVNNAGITRDNL-FLRMKNDEWEDVLRTNLNSLFYITQ 161
Query: 131 DAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
             +  M   +   ++ ISSI G       A Y                E+A  +  VN +
Sbjct: 162 PISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI 221
Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVV 247
           APGF+ +     +  ++ ++K +       R+GT   +             YI G   V+
Sbjct: 222 APGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGRVFVI 279
Query: 248 AGGMA 252
            GG++
Sbjct: 280 DGGLS 284

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGMALN 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NA +      L++ KE     + E N+ S   L 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADITRDNL-LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ + S+ G    +  A Y                E+A     VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  ND  R A   +    RLG    +             YITGETL 
Sbjct: 186 VAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 247 VAGGM 251
           V GGM
Sbjct: 244 VNGGM 248

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICH 69
            GKVAV+T S+ GIGL +AE    EGA +V+ +R+   + +A   LK   G+ V+ +   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+  +    +++     +G  D+ V NA        +++  +      WE++V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGGADILVNNAGTGSNET-IMEAADEKWQFYWELHVMAAVRLA 124
Query: 130 QDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P M+   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT 194
           + PG + T
Sbjct: 185 INPGLILT 192

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 114/243 (46%), Gaps = 8/243 (3%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           KVA+VT +++GIG  +A RL  +G +VVI+ + K    ++   K++A G + +     VS
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 87
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    + L     E +G +DV V NA + P    + +T ++V D++  +N+K +   +++
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIXPLTT-IAETGDAVFDRVIAVNLKGTFNTLRE 146
Query: 132 AAPHMQKGSSVVFIS-SIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM-APDTRVNCVAP 189
           AA  ++ G  ++  S S  G   PS   +Y                E+   D  VN VAP
Sbjct: 147 AAQRLRVGGRIINXSTSQVGLLHPS-YGIYAAAKAGVEAXTHVLSKELRGRDITVNAVAP 205
Query: 190 GFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVA 248
           G  PT     L G +D VR        L RLGT  ++             ++ G+ L   
Sbjct: 206 G--PTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN 263
Query: 249 GGM 251
           GG+
Sbjct: 264 GGI 266

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 113/259 (43%), Gaps = 22/259 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           + F  KVA+VT  + GIGL V + L   GA VV  S  +K+     +  K          
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK---------- 59
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+NE+  K  ++KT +KYGRID+ V NA +  Y+  L  T   +  ++ ++NV  S L
Sbjct: 60  IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYSP-LHLTPTEIWRRIIDVNVNGSYL 118
Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 185
           + +   P M      S++ I+S+  Y      A Y                + AP  R N
Sbjct: 119 MAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCN 178
Query: 186 CVAPGFVPTHF----AQALLGND--AVRKALEG---KTLLNRLGTTGNMXXXXXXXXXXX 236
            V PG + T      A+  +G D  AV + +E    +  + R+G    +           
Sbjct: 179 AVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASDR 238
Query: 237 XXYITGETLVVAGGMASRL 255
             +ITG  L V GG+ S+L
Sbjct: 239 SSFITGACLTVDGGLLSKL 257

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGMALN 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NA +      L++ KE     + E N+ S   L 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL-LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ + S+ G    +  A +                E+A     VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   +AL  ND  R A   +    RLG    +             YITGETL 
Sbjct: 186 VAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 247 VAGGM 251
           V GGM
Sbjct: 244 VNGGM 248

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 11/247 (4%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
           Q K A+VT S++G+G   A RL   G ++VI+ +R +K   +  E+++ LG++V+ +  +
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKAN 62
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAA---VNPYAADLLKTKESVLDKLWEINVKSSI 126
           V      K +  +  E +GR+DVFV NAA   + P    +++ +E+  D    IN K+ +
Sbjct: 63  VGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP----VMELEETHWDWTMNINAKALL 118
Query: 127 LLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
              Q+AA  M+K  G  +V ISS+   +        GV              E++P    
Sbjct: 119 FCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQII 178
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VN V+ G + T   +     + + +     T   R+    +M              I G+
Sbjct: 179 VNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQ 238
Query: 244 TLVVAGG 250
           T++V GG
Sbjct: 239 TIIVDGG 245

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
           R  GKVA+VT S +GIG  VA  LG  GA VV++ +   K+ +K V ++KALG + I I 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +        L D+ V  +G +D+ V N+ V  +   L    E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSF-GHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 128 LMQDAAPHMQKGSSVVFISS 147
           + ++A  H+ +G  +V  SS
Sbjct: 134 VAREAYRHLTEGGRIVLTSS 153

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
           R  GKVA+VT S +GIG  VA  LG  GA VV++ +   K+ +K V ++KALG + I I 
Sbjct: 15  RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +        L D+ V  +G +D+ V N+ V  +   L    E   D+++ +N +    
Sbjct: 75  ADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSF-GHLKDVTEEEFDRVFSLNTRGQFF 133
Query: 128 LMQDAAPHMQKGSSVVFISS 147
           + ++A  H+ +G  +V  SS
Sbjct: 134 VAREAYRHLTEGGRIVLTSS 153

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GKVA+VT +  GIGL VA RL  EG  V+ +       D A  K   +G         
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATK---IGCGAAACRVD 83
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS+EQ    ++D  V  +G +D  V NA V  + A L+ T     D++  IN++ + L  
Sbjct: 84  VSDEQQIIAMVDACVAAFGGVDKLVANAGV-VHLASLIDTTVEDFDRVIAINLRGAWLCT 142
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM-APDTRVNC 186
           + AAP M  + G ++V +SS+AG         YG+              E+ +   R N 
Sbjct: 143 KHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNT 202
Query: 187 VAPGFVPTHFAQ-ALLGNDAVRKALEGKTLLNRL 219
           + P FV T   Q A+   D    A   ++++ RL
Sbjct: 203 LLPAFVDTPMQQTAMAMFDGALGAGGARSMIARL 236

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 88/188 (46%), Gaps = 5/188 (2%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICH 69
            GKVAV+T S+ GIGL +AE    EGA +V+ +R+   + +A   LK   G+ V+ +   
Sbjct: 6   SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVD 65
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+  +    +++     +G  D+ V NA        +++  +      WE+ V +++ L 
Sbjct: 66  VATPEGVDAVVESVRSSFGGADILVNNAGTGSNET-IMEAADEKWQFYWELLVMAAVRLA 124
Query: 130 QDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +   P M+   G +++  +SI   QP     +Y V              E+  D  RVNC
Sbjct: 125 RGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC 184
Query: 187 VAPGFVPT 194
           + PG + T
Sbjct: 185 INPGLILT 192

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 10/247 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK A++T ++ GIG  VA      GA V +++R    +    +++  +G + + I C 
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCD 89
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+     + ++D+   + G ID+ V NA +    A +L        ++ + NV    L  
Sbjct: 90  VTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSVQA-MLDMPLEEFQRIQDTNVTGVFLTA 148
Query: 130 QDAAPHMQK---GSSVVFISSIAGY--QPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
           Q AA  M     G +++  +S++G+    P  ++ Y                E+AP   R
Sbjct: 149 QAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIR 208
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VN V+PG++ T   + L    A+    E K  L R+G    +             Y+TG 
Sbjct: 209 VNSVSPGYIRTELVEPLADYHAL---WEPKIPLGRMGRPEELTGLYLYLASAASSYMTGS 265
Query: 244 TLVVAGG 250
            +V+ GG
Sbjct: 266 DIVIDGG 272

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 9/201 (4%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIG 65
           RF  K  ++T S+ GIG   A     EGA+V I+ R  + +++  + +   G+   +V  
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKE--SVLDKLWEINV 122
           ++  V+ E  +  +I+ T++++G+IDV V NA A  P A     T +   +  K  ++N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
           ++ I + +   PH+   KG  V   S +AG Q       Y +              ++A 
Sbjct: 123 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 182
Query: 181 -DTRVNCVAPGFVPTHFAQAL 200
              RVN V+PG V T F  A+
Sbjct: 183 FGIRVNSVSPGMVETGFTNAM 203

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 6/245 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            QGKVA+VT +++GIG  +A  LG  GA V+ ++      +K  E LKA G+E  G++  
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLD 84
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS+++     ++   +  G+  + V NA +      L++ K+     +   N+ S   L 
Sbjct: 85  VSSDESVAATLEHIQQHLGQPLIVVNNAGITRDNL-LVRMKDDEWFDVVNTNLNSLYRLS 143
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           +     M K     ++ I S+ G    +    Y                E+      VN 
Sbjct: 144 KAVLRGMTKARWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRAITVNA 203
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPGF+ T   + L   +A R+AL G+  L RLG    +             Y+TG T+ 
Sbjct: 204 VAPGFIDTDMTREL--PEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVP 261
Query: 247 VAGGM 251
           V GGM
Sbjct: 262 VNGGM 266

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 75.1 bits (183), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 112/251 (44%), Gaps = 9/251 (3%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           RF+ KV +VT S  GIG   AE L  EGA+VV++    +  +   +++ A G   I +  
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV 65
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKE-SVLDKLWEINVKSSI 126
            VS+ +  K + D+T+ ++G ID  V NAA+      D L T +     K   +N+  ++
Sbjct: 66  DVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGAL 125
Query: 127 LLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
              +     M K  G ++V  SS A +   +    YG+              E+   + R
Sbjct: 126 WCTRAVYKKMTKRGGGAIVNQSSTAAWLYSN---YYGLAKVGINGLTQQLSRELGGRNIR 182
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           +N +APG + T   +     + V   ++G   L+R+GT  ++             +ITG+
Sbjct: 183 INAIAPGPIDTEANRTTTPKEMVDDIVKGLP-LSRMGTPDDLVGMCLFLLSDEASWITGQ 241
Query: 244 TLVVAGGMASR 254
              V GG   R
Sbjct: 242 IFNVDGGQIIR 252

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 108/245 (44%), Gaps = 9/245 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G+  +
Sbjct: 10  LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGMALN 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NA +      L++ KE     + E N+ S   L 
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL-LMRMKEEEWSDIMETNLTSIFRLS 125
Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
           +     M K     ++ + S+ G    +  A Y                E+A     VN 
Sbjct: 126 KAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNT 185
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPG + T   +AL  ND  R A   +    RLG    +             YITGETL 
Sbjct: 186 VAPGAIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLH 243
Query: 247 VAGGM 251
           V GGM
Sbjct: 244 VNGGM 248

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 5/247 (2%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
           +RF  +  VV  + + IG   A R   EGA+VV++ +   +    AV +++ LG   + I
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              ++N    +  I    +K+G I   V  A        + +  E+   ++ ++N+ S  
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123
Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQ--PPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
           L  + A P M KG ++V  SS AG     P A+A Y                E+ P  RV
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALA-YATSKGAVMTFTRGLAKEVGPKIRV 182
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
           N V PG + T F       + VR+ + G T L R G++ ++             Y+TG  
Sbjct: 183 NAVCPGMISTTFHDTFTKPE-VRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGAC 241
Query: 245 LVVAGGM 251
             + GG+
Sbjct: 242 YDINGGV 248

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 74.3 bits (181), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 113/260 (43%), Gaps = 15/260 (5%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEV 63
           + +K   GKVA+ T + +GIG G+A  LG  GASVV++     K  ++ V +LK LG + 
Sbjct: 14  DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG 73
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           + I   +S       L DK V  +G +D  + N+ +  +  +L  T+E + DK++ +N +
Sbjct: 74  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQE-LFDKVFNLNTR 132
Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQP--PSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
               + Q    H ++G  ++  SSIA      P+     G                 A  
Sbjct: 133 GQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 192
Query: 182 TRVNCVAPGFVPT--------HFAQA---LLGNDAVRKALEGKTLLNRLGTTGNMXXXXX 230
             VNC+APG V T        H+A      +  + + + L     L R+G   ++     
Sbjct: 193 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 252
Query: 231 XXXXXXXXYITGETLVVAGG 250
                   +I G+ + + GG
Sbjct: 253 ALCQEESEWINGQVIKLTGG 272

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 202 VNAVCPGFVETPMAASV 218

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 73.9 bits (180), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVI 64
           + +G+  ++T    G+G  + +R   EGA V +       +DK+ E+L  L    G  V+
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAV-------LDKSAERLAELETDHGDNVL 54
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL----DKLWEI 120
           GI+  V + + +K    + V ++G+ID  + NA +  Y+  L+   E  L    D+++ I
Sbjct: 55  GIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHI 114
Query: 121 NVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
           NVK  I  ++   P +     +V+F  S AG+ P     +Y                E+A
Sbjct: 115 NVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA 174
Query: 180 PDTRVNCVAPG 190
           P  RVN V  G
Sbjct: 175 PYVRVNGVGSG 185

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 202 VNAVCPGFVETPMAASV 218

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 198 VNAVCPGFVETPMAASV 214

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 202 VNAVCPGFVETPMAASV 218

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 121
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 122 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 181
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 182 VNAVCPGFVETPMAASV 198

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 9/200 (4%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIG 65
           RF GK  ++T S+ GIG   A     EGA V I+ R +  +++  +++   G+   ++  
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV--LDKLWEINVK 123
           ++  V+    + ++I+ T+ K+G+ID+ V NA  N  A     T + V    K +++N +
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGAN-LADGTANTDQPVELYQKTFKLNFQ 141
Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           + I + Q    H+   KG  V   S +AG Q  S    Y                ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201
Query: 182 -TRVNCVAPGFVPTHFAQAL 200
             RVN V+PG V T F  A+
Sbjct: 202 GVRVNSVSPGAVATGFMGAM 221

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 202 VNAVCPGFVETPMAASV 218

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIIC 68
             G+ A+VT +T G+G  +A  L  +GA V +  +R++K  + A E    LG  +     
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAE----LGERIFVFPA 60
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           ++S+ +  K L  K  E+ G +D+ V NA +       ++  +   D +  +N+ S   L
Sbjct: 61  NLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL-FVRMSDEDWDAVLTVNLTSVFNL 119
Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            ++    M  ++   ++ I+SI G       A Y                E+A  +  VN
Sbjct: 120 TRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN 179
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
           C+APGF+ +     L  N+  + A+ G   + R+G   ++             Y+TG+TL
Sbjct: 180 CIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTL 237
Query: 246 VVAGGMA 252
            V GGMA
Sbjct: 238 HVNGGMA 244

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 108/255 (42%), Gaps = 18/255 (7%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M +R + K+AV+T    GIG  +AER  +EGA + I+        +A   ++ LG  V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVP--APEAEAAIRNLGRRVLT 58
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINV 122
           + C VS     +    + +  +GR D+ V NA + P    L+   E   +   K +EINV
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP----LIPFDELTFEQWKKTFEINV 114
Query: 123 KSSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            S  L+ +   P M++     ++ ++S   +    A   Y                ++  
Sbjct: 115 DSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGK 174
Query: 181 D-TRVNCVAPGFVPTHFAQALLGN---DAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXX 236
           D   VN +AP  V T   +A   +   D +   L+    + RL    ++           
Sbjct: 175 DGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQA---IPRLQVPLDLTGAAAFLASDD 231
Query: 237 XXYITGETLVVAGGM 251
             +ITG+TL V GGM
Sbjct: 232 ASFITGQTLAVDGGM 246

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 111/247 (44%), Gaps = 11/247 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIIC 68
             G+ A+VT +T G+G  +A  L  +GA V +  +R++K  + A E    LG  +     
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGAIVGLHGTREEKLKELAAE----LGERIFVFPA 63
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           ++S+ +  K L  K  E+ G +D+ V NA +       ++  +   D +  +N+ S   L
Sbjct: 64  NLSDREAVKALGQKAEEEMGGVDILVNNAGITRDGL-FVRMSDEDWDAVLTVNLTSVFNL 122
Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            ++    M  ++   ++ I+SI G       A Y                E+A  +  VN
Sbjct: 123 TRELTHPMMRRRNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN 182
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
           C+APGF+ +     L  N+  + A+ G   + R+G   ++             Y+TG+TL
Sbjct: 183 CIAPGFIESAMTGKL--NEKQKDAIMGNIPMKRMGVGADIAAAVVYLASDEAAYVTGQTL 240
Query: 246 VVAGGMA 252
            V GGMA
Sbjct: 241 HVNGGMA 247

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGA----TAE-LADELWLDVVETNLTGVFRV 137
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 138 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 197
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PGFV T  A ++
Sbjct: 198 VNAVCPGFVETPMAASV 214

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           +QGK A+V   T G GL    RL   GA V+++ R + N+ +  E+    G  V  +   
Sbjct: 6   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSD 62
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEINVKSSI 126
           +++      L     +  G ID+  +NA V+   P+     +  E+  D+ + +N K + 
Sbjct: 63  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFD----QVSEASYDRQFAVNTKGAF 118
Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             +Q   P +++G S+VF SS+A        ++Y                E+ P   RVN
Sbjct: 119 FTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVN 178
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL-----GTTGNMXXXXXXXXXXXXXYI 240
            V+PGF+ T   + + G     +A E KTL + +       T +              + 
Sbjct: 179 SVSPGFIDTP-TKGVAGITEAERA-EFKTLGDNITPXKRNGTADEVARAVLFLAFEATFT 236
Query: 241 TGETLVVAGGMASRL 255
           TG  L V GG+  +L
Sbjct: 237 TGAKLAVDGGLGQKL 251

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 109/255 (42%), Gaps = 18/255 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           +QGK A+V   T G GL    RL   GA V+++ R + N+ +  E+    G  V  +   
Sbjct: 5   YQGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREE---FGPRVHALRSD 61
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEINVKSSI 126
           +++      L     +  G ID+  +NA V+   P+     +  E+  D+ + +N K + 
Sbjct: 62  IADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFD----QVSEASYDRQFAVNTKGAF 117
Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             +Q   P +++G S+VF SS+A        ++Y                E+ P   RVN
Sbjct: 118 FTVQRLTPLIREGGSIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAELLPRGIRVN 177
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL-----GTTGNMXXXXXXXXXXXXXYI 240
            V+PGF+ T   + + G     +A E KTL + +       T +              + 
Sbjct: 178 SVSPGFIDTP-TKGVAGITEAERA-EFKTLGDNITPXKRNGTADEVARAVLFLAFEATFT 235
Query: 241 TGETLVVAGGMASRL 255
           TG  L V GG+  +L
Sbjct: 236 TGAKLAVDGGLGQKL 250

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 99/251 (39%), Gaps = 15/251 (5%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA VT S+ GIG  VAE     GA V I        +KA    K  G+      C+
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCN 91
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKSSILL 128
           +S+ +  +  I +  + +G IDVFV NA V      ++        +K+  +++      
Sbjct: 92  ISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYC 151
Query: 129 MQDAAPHMQKG--SSVVFISSIAG--YQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
             +     +K    S++  SSI+G     P   A Y                E AP  RV
Sbjct: 152 SHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFARV 211
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGK----TLLNRLGTTGNMXXXXXXXXXXXXXYI 240
           N ++PG++ T         D   K ++ K    T L R G T  +             + 
Sbjct: 212 NTISPGYIDTDIT------DFASKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFT 265
Query: 241 TGETLVVAGGM 251
           TG  +V+ GG 
Sbjct: 266 TGSDVVIDGGY 276

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++  +    +A+     LG    G   +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGA-QAISDY--LGDNGKGXALN 63
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N +  + ++    +++G +D+ V NA +      L + KE     + E N+ +SI  +
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGITRDNL-LXRXKEEEWSDIXETNL-TSIFRL 121
Query: 130 QDA---APHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
             A       ++   ++ + S+ G    +  A Y                E+A     VN
Sbjct: 122 SKAVLRGXXKKRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T   +AL  ND  R A   +    RLG    +             YITGETL
Sbjct: 182 TVAPGFIETDXTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETL 239
Query: 246 VVAGG 250
            V GG
Sbjct: 240 HVNGG 244

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 72.4 bits (176), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 113/249 (45%), Gaps = 9/249 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT +++GIG  +A+RL  +GA V I    +++  ++ V ++++ G     I  
Sbjct: 5   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 64
Query: 69  HVSN----EQHRKNLIDKTVEKYG--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           ++ +    E    +L ++   + G  + D+ + NA + P  A + +T E   D+   +N 
Sbjct: 65  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRXVSVNA 123
Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM-APD 181
           K+   ++Q A   ++  S ++ ISS A          Y                ++ A  
Sbjct: 124 KAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSXTKGAINTXTFTLAKQLGARG 183
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
             VN + PGFV T     LL +   ++     +  NRLG   ++             ++T
Sbjct: 184 ITVNAILPGFVKTDXNAELLSDPXXKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT 243
Query: 242 GETLVVAGG 250
           G+ + V+GG
Sbjct: 244 GQLIDVSGG 252

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 94/197 (47%), Gaps = 14/197 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSSILL 128
               + L+   VE+YG +DV V NA      A    T E + D+LW    E N+     +
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRPGGGA----TAE-LADELWLDVVETNLTGVFRV 141
Query: 129 MQD---AAPHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +    A   +++G+  +V I+S  G Q     A Y                E+A     
Sbjct: 142 TKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGIT 201
Query: 184 VNCVAPGFVPTHFAQAL 200
           VN V PG+V T  A ++
Sbjct: 202 VNAVCPGWVETPMAASV 218

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 8/244 (3%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           V VVT +++GIG  +A  LG  G  V+++ +R  K  ++  ++++A G + I     VS 
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSK 62
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           E   + ++   ++ +G IDV V NA +      L++ K+S  D++ ++N+    L  Q A
Sbjct: 63  EADVEAMMKTAIDAWGTIDVVVNNAGITRDTL-LIRMKKSQWDEVIDLNLTGVFLCTQAA 121
Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
              M K     ++ I+S+ G       A Y                E A  +  VN V P
Sbjct: 122 TKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCP 181
Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX-XXXYITGETLVVA 248
           GF+ +    A LG D  +K L G   L R G   N+              YITG+   + 
Sbjct: 182 GFIASDM-TAKLGEDMEKKIL-GTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTID 239
Query: 249 GGMA 252
           GG+A
Sbjct: 240 GGIA 243

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 4/156 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F G+ AVVT    GIGL  A      GA +V+S   Q  +++AV  L+  G +  G++C 
Sbjct: 29  FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCD 88
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V +      L D+     G +DV   NA +   A  L +        + +I++  SI  +
Sbjct: 89  VRHLDEMVRLADEAFRLLGGVDVVFSNAGI-VVAGPLAQMNHDDWRWVIDIDLWGSIHAV 147
Query: 130 QDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGV 162
           +   P + +   G  + F +S AG  P + +  YGV
Sbjct: 148 EAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV 183

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 70.5 bits (171), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 24/257 (9%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-----LGIEVI 64
            QG+VA+VT    GIG  + + L   G++VVI+SRK + +  A ++L+A         VI
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVI 75
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EI 120
            I C++ NE+   NL+  T++ +G+I+  V N          L   E +  K W    E 
Sbjct: 76  PIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNG-----GGQFLSPAEHISSKGWHAVLET 130
Query: 121 NVKSSILLMQDAAPHMQK--GSSVV--FISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXX 176
           N+  +  + +       K  G S+V   + + AG+  P A+                   
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF--PLAVHSGAARAGVYNLTKSLALE 188
Query: 177 EMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEG---KTLLNRLGTTGNMXXXXXXXX 233
                 R+NCVAPG + +  A    G+   +   EG   K    R+G    +        
Sbjct: 189 WACSGIRINCVAPGVIYSQTAVENYGSWG-QSFFEGSFQKIPAKRIGVPEEVSSVVCFLL 247
Query: 234 XXXXXYITGETLVVAGG 250
                +ITG+++ V GG
Sbjct: 248 SPAASFITGQSVDVDGG 264

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 106/248 (42%), Gaps = 17/248 (6%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +V +VT    GIG   AE     GA VV++     N D AV     +G +  G+   VS+
Sbjct: 28  RVCIVTGGGSGIGRATAELFAKNGAYVVVA---DVNEDAAVRVANEIGSKAFGVRVDVSS 84
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +  ++ ++KT  K+GR+DV V NA       +++   E   D++  +NVK   L  +  
Sbjct: 85  AKDAESXVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIXSVNVKGIFLCSKYV 143
Query: 133 APHMQK--GSSVVFISSIAGYQPPSAMA---MYGVXXXXXXXXXXXXXXEMAPD-TRVNC 186
            P  ++  G S++  +S   Y   SA+A    Y                + A +  RVN 
Sbjct: 144 IPVXRRNGGGSIINTTS---YTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVNA 200
Query: 187 VAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITG 242
           VAPG + + +   +         +R     + + +R GT   +             + TG
Sbjct: 201 VAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRFATG 260
Query: 243 ETLVVAGG 250
             L V GG
Sbjct: 261 SILTVDGG 268

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 4/187 (2%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KV ++T ++ GIG G+A  LG+ GA +++ +R+Q  ++    +++  G   +  +  V++
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTD 64
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                      V+ +GRIDV V NA V P +  L   K    +++ ++N+K  +  +   
Sbjct: 65  RHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSP-LAAVKVDEWERMIDVNIKGVLWGIGAV 123
Query: 133 APHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPG 190
            P M  Q+   ++ I SI         A+Y                E + + RV CV PG
Sbjct: 124 LPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQE-STNIRVTCVNPG 182
Query: 191 FVPTHFA 197
            V +  A
Sbjct: 183 VVESELA 189

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE--- 62
           MA    GKVA+VT + QGIG   AE L L+GA V +      N++  V+   AL  +   
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDW---NLEAGVQCKAALHEQFEP 57
Query: 63  --VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
              + I C V+++Q  ++   K V+ +GR+D+ V NA VN          E   +K  +I
Sbjct: 58  QKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVN---------NEKNWEKTLQI 108
Query: 121 NVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXX 175
           N+ S I        +M K     G  ++ +SS+AG  P +   +Y               
Sbjct: 109 NLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAA 168
Query: 176 XE---MAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK 213
                M    R+N + PGFV T   +++   + + + +E K
Sbjct: 169 LAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYK 209

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 107/242 (44%), Gaps = 18/242 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F+GK+A+VT +++GIG  +AE L   GA  VI +   +N  +A+     LG    G++ +
Sbjct: 3   FEGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDY--LGANGKGLMLN 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++    +++++K   ++G +D+ V NA +      L++ K+   + + E N+ S   L 
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGITRDNL-LMRMKDEEWNDIIETNLSSVFRLS 118
Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAP 189
           +     M K      I+   G Q   A A  G+               +     VN VAP
Sbjct: 119 KAVMRAMMKKRHGRIIT--IGGQANYAAAKAGLIGFSKSLAREVASRGIT----VNVVAP 172
Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAG 249
           GF+ T        +D  R  +  +    RLG    +             YITGETL V G
Sbjct: 173 GFIET--------SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNG 224
Query: 250 GM 251
           GM
Sbjct: 225 GM 226

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 111/247 (44%), Gaps = 4/247 (1%)
Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G+ A+VT S++G+G  +AE L + GA ++I+      V + V++ + +G +   +   V+
Sbjct: 26  GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT 85
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E        +  E+   +D+ V NA +  +   +++ + +   ++ + N+ S+ ++ ++
Sbjct: 86  SESEIIEAFARLDEQGIDVDILVNNAGIQ-FRKPMIELETADWQRVIDTNLTSAFMIGRE 144
Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           AA  M  +    +V I S+      + +A Y V              E A    + N + 
Sbjct: 145 AAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIG 204
Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVA 248
           PG++ T   QAL+ N      ++ +T   R G    +             Y+ G+ + V 
Sbjct: 205 PGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQIIYVD 264
Query: 249 GGMASRL 255
           GGM S L
Sbjct: 265 GGMLSVL 271

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIG 65
           + R  GKVA++T  T GIGL +A +   EGA V+I+ R     +KA    K++G  + I 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITDRHSDVGEKAA---KSVGTPDQIQ 57
Query: 66  IICH-VSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLDKLWEINV 122
              H  S+E     L D T + +G +   V NA  AVN     + +T  +   KL  +N+
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN---KSVEETTTAEWRKLLAVNL 114
Query: 123 KSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
                  +     M+    G+S++ +SSI G+    ++  Y                + A
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 180 ---PDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXX 236
               D RVN V PG++ T     L G +    +   KT +  +G   ++           
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQRTKTPMGHIGEPNDIAYICVYLASNE 233
Query: 237 XXYITGETLVVAGGMASR 254
             + TG   VV GG  ++
Sbjct: 234 SKFATGSEFVVDGGYTAQ 251

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 109/258 (42%), Gaps = 17/258 (6%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIG 65
           + R  GKVA++T  T GIGL +A +   EGA V+I+ R     +KA    K++G  + I 
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAA---KSVGTPDQIQ 57
Query: 66  IICH-VSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLDKLWEINV 122
              H  S+E     L D T + +G +   V NA  AVN     + +T  +   KL  +N+
Sbjct: 58  FFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN---KSVEETTTAEWRKLLAVNL 114
Query: 123 KSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
                  +     M+    G+S++ +SSI G+    ++  Y                + A
Sbjct: 115 DGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCA 174
Query: 180 ---PDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXX 236
               D RVN V PG++ T     L G +    +   KT +  +G   ++           
Sbjct: 175 LKDYDVRVNTVHPGYIKTPLVDDLPGAEEAM-SQRTKTPMGHIGEPNDIAYICVYLASNE 233
Query: 237 XXYITGETLVVAGGMASR 254
             + TG   VV GG  ++
Sbjct: 234 SKFATGSEFVVDGGYTAQ 251

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 16/252 (6%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA++T +  G G G+A+R    GA VVI  R +   ++   ++   G   + +   
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAAD 63
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN--PYAADLLKTKESVLDKLWEINVKSSIL 127
           +S E      ++  + K+G++D+ V NA +   P  A+L++ +E   D++  +NV+   L
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEE--FDRIVGVNVRGVYL 121
Query: 128 LMQDAAPHMQ----KGSSVVF--ISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP- 180
           +     PH +    KG   V   ++S    +P   +A Y                E+AP 
Sbjct: 122 MTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPA 181
Query: 181 DTRVNCVAPGFVPTHFAQALLGNDA--VRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
             RV  + P    T      +G D+  +RK       + RL    ++             
Sbjct: 182 KIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQAS 241
Query: 239 YITGETLVVAGG 250
            ITG  L V GG
Sbjct: 242 MITGVALDVDGG 253

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score = 68.2 bits (165), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 110/255 (43%), Gaps = 22/255 (8%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG---I 66
           F GK  +VT   +GIG  +A+    EGA V +   + +  + A         E IG    
Sbjct: 4   FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA---------EAIGGAFF 54
Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVKSS 125
              + +E+ R   +++     GR+DV V NAA+  P +A  ++  E    ++ E+N+ + 
Sbjct: 55  QVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPE--WRRVLEVNLTAP 112
Query: 126 ILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DT 182
           + L   AA  M+K  G ++V ++S+ G       A Y                ++AP   
Sbjct: 113 MHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRI 172
Query: 183 RVNCVAPGFVPTHF---AQALLGN-DAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
           RVN VAPG + T     A AL  + +  R+  E    L RLG    +             
Sbjct: 173 RVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKAS 232
Query: 239 YITGETLVVAGGMAS 253
           +ITG  L V GGM +
Sbjct: 233 FITGAILPVDGGMTA 247

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score = 67.4 bits (163), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 19/256 (7%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  + KV +VT +  GIG  +A++  L  + VV     +  +++ V++L+ +G EV+G+ 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----INVK 123
             VS ++  +  + +T E Y RIDV   NA +     D +     V D+LWE    +N+ 
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGI----MDGVTPVAEVSDELWERVLAVNLY 118
Query: 124 SSILLMQDAAPHMQKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           S+    +   P M K    V +  +SIAG +   A A Y V                   
Sbjct: 119 SAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQ 178
Query: 182 -TRVNCVAPGFVPTHFAQALLGND-----AVRKALEGKTLLNRLGTTGNMXXXXXXXXXX 235
             R   V PG V T+     LG+       +R   +  +L +RL    ++          
Sbjct: 179 GIRAVAVLPGTVKTNIG---LGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASD 235
Query: 236 XXXYITGETLVVAGGM 251
              ++ G+ +VV GG+
Sbjct: 236 EASFVNGDAVVVDGGL 251

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 11/249 (4%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVI 64
           R + + A+VT    GIG   A     EGA V I+    +  D   +++KAL    G + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEED--AQQVKALIEECGRKAV 103
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   +S+E   ++L+ K  E  G +D+  L A       ++         + + +NV +
Sbjct: 104 LLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163
Query: 125 SILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
              + Q+A P + KG+S++  SSI  YQP   +  Y                ++A    R
Sbjct: 164 LFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALE--GKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
           VN VAPG  P   A  + G     K  +   +T + R G    +             Y+T
Sbjct: 224 VNIVAPG--PIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVT 281
Query: 242 GETLVVAGG 250
            E   V GG
Sbjct: 282 AEVHGVCGG 290

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 67.0 bits (162), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 9/156 (5%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI--GI 66
           + +GK A+VT ST GIG  +A  L  EGA+V+I+ R+++NV++ +++++A   + I   +
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
           +  +  EQ  +++I    EKY ++D+ + N  +     +     +    KL+E+N+ S +
Sbjct: 67  VADLGTEQGCQDVI----EKYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIXSGV 121
Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMY 160
            L +        +K   V+FI+S A   P    A Y
Sbjct: 122 RLTRSYLKKXIERKEGRVIFIASEAAIXPSQEXAHY 157

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 15/242 (6%)
Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           A+VT  ++GIG  +AE L   G  V I+SR   N ++A + L A+ +           + 
Sbjct: 5   ALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEAAQSLGAVPLPTD------LEKD 55
Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
             K L+ + +E  G + V V  AAVN     L  + E     L+ +++  + LL Q AAP
Sbjct: 56  DPKGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLY-LHLDVAFLLAQAAAP 114
Query: 135 HMQKG--SSVVFISSIAGYQP--PSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
           HM +     V+FI S+  +    P  +  Y                E A    RVN + P
Sbjct: 115 HMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCP 174
Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAG 249
           G+V T F   L  N  + + +  +  + R      +             Y+TG+ + V G
Sbjct: 175 GYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAVDG 234
Query: 250 GM 251
           G 
Sbjct: 235 GF 236

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 108/247 (43%), Gaps = 3/247 (1%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIG 65
           +++ +GK  ++T    GIG  V+     EGA++ I+   ++ + ++  + ++  G++ + 
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   +S+EQH K+++ +TV + G +++ V N A       L       L+K + IN+ S 
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             + + A  H+++G  ++  +SI  Y+    +  Y                 +     RV
Sbjct: 162 FHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRV 221
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
           N VAPG + T    +      V +       + R G    +             Y+TG+ 
Sbjct: 222 NGVAPGPIWTPLIPSSFDEKKVSQ-FGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQM 280
Query: 245 LVVAGGM 251
           + V GG+
Sbjct: 281 IHVNGGV 287

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 109/256 (42%), Gaps = 10/256 (3%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M    + KVA++T +  GIGL  +  L   GA VV++   + ++  A     ++G   +
Sbjct: 4   SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAA---ASVGRGAV 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES--VLDKLWEINV 122
             +  ++NE   + LID T++ +GR+D+ V N A +   AD+L T+ +  V D  + +N 
Sbjct: 61  HHVVDLTNEVSVRALIDFTIDTFGRLDI-VDNNAAHSDPADMLVTQMTVDVWDDTFTVNA 119
Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
           + ++L+ + A P +    G ++V ISS   +        Y                +   
Sbjct: 120 RGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGR 179
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
              R N +APG V T   +  L    V        L  R+G    +             +
Sbjct: 180 HGVRCNAIAPGLVRTPRLEVGLPQPIV-DIFATHHLAGRIGEPHEIAELVCFLASDRAAF 238
Query: 240 ITGETLVVAGGMASRL 255
           ITG+ +    G+ + L
Sbjct: 239 ITGQVIAADSGLLAHL 254

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 96/230 (41%), Gaps = 19/230 (8%)
Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           MEK+    R   +VA+VT   Q IGL     L   GA V+I+   +    KAVE L+  G
Sbjct: 6   MEKL----RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEG 61
Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK-ESVLDKLW- 118
            +V  ++  V+N +  +N +    E+ GR+D+ V  A +      + + K E + D  W 
Sbjct: 62  HDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGIC-----ISEVKAEDMTDGQWL 116
Query: 119 ---EINVKSSILLMQDAAPHM--QKGSSVVFISSIAGY--QPPSAMAMYGVXXXXXXXXX 171
              +IN+       Q     M  QK   +V I S++G     P   A Y           
Sbjct: 117 KQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYI 176
Query: 172 XXXXXEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG 220
                E AP   R N VAP ++ T   +  +    +  A    T + R+G
Sbjct: 177 RSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVG 226

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 93/206 (45%), Gaps = 16/206 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVV-ISSRKQ-----------KNVDKA 52
           +MA + +GKVA +T + +G G   A  L  EGA ++ I   KQ            ++ + 
Sbjct: 21  SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAET 80
Query: 53  VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES 112
           V +++ALG  +I     V +    +  +D  V + GR+D+ + NAA+      L +    
Sbjct: 81  VRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140
Query: 113 VLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXX 169
               + ++N+  + +  + A PH+   ++G S+VF SSI G +    +  Y         
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHG 200
Query: 170 XXXXXXXEMAP-DTRVNCVAPGFVPT 194
                  E+ P + RVN V P  V T
Sbjct: 201 LMRTMALELGPRNIRVNIVCPSSVAT 226

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 116/249 (46%), Gaps = 28/249 (11%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + K  +V A+++GIG  VA+ L  EGA V I +R ++ + ++  +          ++C +
Sbjct: 18  RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY---------VVCDL 68
Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA--DLLKTKE--SVLDKLWEINVKSSI 126
                RK+L D   EK   +D+ VLNA   P A   D L  ++    +D L+ +N+   I
Sbjct: 69  -----RKDL-DLLFEKVKEVDILVLNAG-GPKAGFFDELTNEDFKEAIDSLF-LNM---I 117
Query: 127 LLMQDAAPHM-QKG-SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
            ++++  P M +KG   +V I+S +   P   +                   E+AP    
Sbjct: 118 KIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGIT 177
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VNCVAPG+  T   + LL  +  +K +E +  + R+     +             Y+TG+
Sbjct: 178 VNCVAPGWTETERVKELLSEEK-KKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQ 236
Query: 244 TLVVAGGMA 252
           T+VV GG++
Sbjct: 237 TIVVDGGLS 245

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 8/188 (4%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T S +GIG   AE    EGA V I+     N++ A      +G     I  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIA---DINLEAARATAAEIGPAACAIAL 58
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+++      + + ++++G ID+ V NAA+   A  +  T+ES  D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRES-YDRLFAINVSGTLFM 117
Query: 129 MQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
           MQ  A  M    +G  ++ ++S AG +  + + +Y                 +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177
Query: 185 NCVAPGFV 192
           N +APG V
Sbjct: 178 NAIAPGVV 185

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 107/247 (43%), Gaps = 3/247 (1%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIG 65
           +++ +GK  ++T    GIG  V+     EGA++ I+   ++ + ++  + ++  G++ + 
Sbjct: 42  SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVL 101
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   +S+EQH K+++ +TV + G +++ V N A       L       L+K + IN+ S 
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSY 161
Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
             + + A  H+++G  ++  +SI  Y+    +  Y                 +     RV
Sbjct: 162 FHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRV 221
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
           N VAPG + T    +      V +         R G    +             Y+TG+ 
Sbjct: 222 NGVAPGPIWTPLIPSSFDEKKVSQ-FGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQX 280
Query: 245 LVVAGGM 251
           + V GG+
Sbjct: 281 IHVNGGV 287

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 104/251 (41%), Gaps = 16/251 (6%)
Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G++A+VT  ++GIG  +A+ L   GA V I +R  +       +L A G +   I   +S
Sbjct: 29  GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLS 87
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E   + L     E   R+D+ V NA  + + A L     S  +K+ ++NV S    +Q 
Sbjct: 88  SEAGARRLAQALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVMQLNVTSVFSCIQQ 146
Query: 132 AAPHMQKGSS------VVFISSIAGYQPPSAMA----MYGVXXXXXXXXXXXXXXEMAPD 181
             P +++ +S      V+ I S+AG    SAM      YG               E+  +
Sbjct: 147 LLPLLRRSASAENPARVINIGSVAGI---SAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203
Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
              VN +APG  P+   + +  +    +A      + R G    M             Y+
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAISLAGTAGAYM 263
Query: 241 TGETLVVAGGM 251
           TG  + + GG 
Sbjct: 264 TGNVIPIDGGF 274

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 106/245 (43%), Gaps = 8/245 (3%)
Query: 10  FQGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGII 67
            +GKV +VTA+   GIG   A R  LEGA VVIS   ++ + +  ++L  LG+  V  ++
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVV 79
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C V++ +    LI +TVEK GR+DV V NA +      +  T E   D++  + + S + 
Sbjct: 80  CDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEE-WDRVLNVTLTSVMR 138
Query: 128 LMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
             + A  + +    G  +V  +S+ G++   + + Y                E      R
Sbjct: 139 ATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVR 198
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           +N V+P      F +    ++ + + L       R      +             Y+TGE
Sbjct: 199 INAVSPSIARHKFLEKTSSSELLDR-LASDEAFGRAAEPWEVAATIAFLASDYSSYMTGE 257
Query: 244 TLVVA 248
            + V+
Sbjct: 258 VVSVS 262

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 104/243 (42%), Gaps = 14/243 (5%)
Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQ 74
           +VT  T+GIG G+A      GA+V +++R  + +     +L  LG   VIG+   VS+  
Sbjct: 45  LVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPG 104
Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA-A 133
              +     V+ +G +DV   NA + P A     T E  L ++ ++NVK ++  +Q   A
Sbjct: 105 SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQ-LSEVLDVNVKGTVYTVQACLA 163
Query: 134 PHMQKGSSVVFISS-----IAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
           P    G   V ++S     + GY      + YG               E+AP    VN +
Sbjct: 164 PLTASGRGRVILTSSITGPVTGYP---GWSHYGASKAAQLGFMRTAAIELAPRGVTVNAI 220
Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVV 247
            PG + T      +G + +   +     +  LG+  ++             YITG+ +VV
Sbjct: 221 LPGNILTE-GLVDMGEEYI-SGMARSIPMGMLGSPVDIGHLAAFLATDEAGYITGQAIVV 278
Query: 248 AGG 250
            GG
Sbjct: 279 DGG 281

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 13/256 (5%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVI 64
           M    +GK  ++T S+QGIGL  A      GA V +  RK   N+D+ +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
                ++  +  + L+D+ V K+G IDV + NA        L +  ++  D + + N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120
Query: 125 SILLMQDAAPHMQ-------KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
            ++  + A PH+        + S+V+   SIAG+      A                  +
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180
Query: 178 M--APDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMX-XXXXXXXX 234
                  R N V+PG V T F  A    D VR  +     + R GT   M          
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAF-HADKTQD-VRDRISNGIPMGRFGTAEEMAPAFLFFASH 238
Query: 235 XXXXYITGETLVVAGG 250
               YITG+ L + GG
Sbjct: 239 LASGYITGQVLDINGG 254

>pdb|4IMR|A Chain A, Crystal Structure Of 3-oxoacyl (acyl-carrier-protein) Reductase (target Efi-506442) From Agrobacterium Tumefaciens C58 With Nadp Bound Length = 275

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 13/249 (5%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +G+ A+VT S++GIG  +AE L   GA V++   K  +     +++ A G     +   
Sbjct: 31  LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGD 90
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S      +LI++  E    +D+ V+NA+    A     T   +  +L  +N+ S++ ++
Sbjct: 91  LSEAGAGTDLIER-AEAIAPVDILVINASAQINATLSALTPNDLAFQL-AVNLGSTVDML 148
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           Q A P M  +K   VV I SI   +P S +  Y                + A D   +N 
Sbjct: 149 QSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNT 208
Query: 187 VAPGFVPT-----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
           +APG V T       AQ   G D   + L     + R G    M             ++T
Sbjct: 209 LAPGLVDTDRNADRRAQDPEGWDEYVRTLN---WMGRAGRPEEMVGAALFLASEACSFMT 265
Query: 242 GETLVVAGG 250
           GET+ + GG
Sbjct: 266 GETIFLTGG 274

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 5/189 (2%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           VA++T +  GIG   A  L  +G +V    R +  V++  +++   G + I +   VS+E
Sbjct: 30  VALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDE 89
Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAA 133
              +N +   V K+G +D+ V NA +N   A +   K    D+   +N++ + L +    
Sbjct: 90  LQXRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTV 149
Query: 134 PHMQK--GSSVVFISSIAG---YQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVA 188
           P++++  G ++V +SSI G   +  P A A                        RVN V 
Sbjct: 150 PYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209
Query: 189 PGFVPTHFA 197
           PG + T+ +
Sbjct: 210 PGAIETNIS 218

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score = 63.9 bits (154), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 102/255 (40%), Gaps = 20/255 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT + QGIG  +A RL  +G +V I+            ++   G   + +   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                  +++  +  G  DV V NA V P +  +      ++DK++ INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAA 121
Query: 133 APHMQK---GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
               +K   G  ++   S AG+     +A+Y                ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181
Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTL------------LNRLGTTGNMXXXXXXXXXXX 236
           PG V T     +   D       GK L            L RL    ++           
Sbjct: 182 PGIVKTPMWAEI---DRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPD 238
Query: 237 XXYITGETLVVAGGM 251
             Y+TG++L++ GGM
Sbjct: 239 SDYMTGQSLLIDGGM 253

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 17/245 (6%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F  +  +VT   +GIGL +A+RL  +G  V ++ R            K L     G+ C 
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG-------APKGL----FGVECD 61
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++            E  G ++V V NA ++  A  L++  E   +K+   N+  +  + 
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVA 120
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  MQ+     ++FI S++G       A Y                E++  +   N 
Sbjct: 121 QRASRSMQRNKFGRMIFIGSVSGSWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 180
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T   +AL  ++ +++         R+GT   +             YI+G  + 
Sbjct: 181 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 247 VAGGM 251
           V GGM
Sbjct: 239 VDGGM 243

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHV 70
           GK A VT  ++GIG  +A+RL LEGA+V ++     +     V +++  G   + I    
Sbjct: 31  GKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADN 90
Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
            + +  +  I +TVE  G +D+ V +A +  ++A L +T  +  D++  +N ++  + ++
Sbjct: 91  RDAEAIEQAIRETVEALGGLDILVNSAGIW-HSAPLEETTVADFDEVXAVNFRAPFVAIR 149
Query: 131 DAAPHMQKGSSVVFI-SSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
            A+ H+  G  ++ I S++A   P   +++Y                ++ P    VN V 
Sbjct: 150 SASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVH 209
Query: 189 PGFVPT 194
           PG   T
Sbjct: 210 PGSTDT 215

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 63.2 bits (152), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 112/264 (42%), Gaps = 24/264 (9%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA-VEKLKA-----LGIEV 63
            +GKVAVVT ST GIGLG+A  L  +GA +V++       D A +EK++A      G++V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG----DAAEIEKVRAGLAAQHGVKV 57
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           +     +S  +  + L+D  V + GRID+ V NA +  + A +        D +  +N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS 116
Query: 124 SSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PHM+K     ++ I+S  G    +  + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAQ----ALLGNDAVRKALEGKTLLN------RLGTTGNMXXXXX 230
               N + PG+V T   +    AL   + V +    + LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMASR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 9/247 (3%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           +  G+ A+VT +T GIG  +A     +GA V +   ++   DK  E    LG +V     
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTRE---DKLKEIAADLGKDVFVFSA 80
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           ++S+ +  K L +    +   ID+ V NA +       ++ ++   D +  +N+ ++  L
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGITRDGL-FVRMQDQDWDDVLAVNLTAASTL 139
Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
            ++    M  ++   ++ I+SI G         Y                E+A  +  VN
Sbjct: 140 TRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVN 199
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
           C+APGF+ +     L  N+  ++A+     + R+G    +             Y+TG+TL
Sbjct: 200 CIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYLTGQTL 257
Query: 246 VVAGGMA 252
            + GGMA
Sbjct: 258 HINGGMA 264

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 96/243 (39%), Gaps = 6/243 (2%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVS 71
           +VA+VT ++ G GL +A R    G  V       + +++ A     A   +V+ +   V+
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA 62
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAV--NPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +E      I  T+E++G IDV V NA +  N  A  L  T     DK+  +NV+   L  
Sbjct: 63  DEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGC 122
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           +   PHM  Q    +V I+S+A        + Y                + A    R N 
Sbjct: 123 RAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNA 182
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           V PG + T   Q  L    +R  +  +     +GT   +             Y+ G  LV
Sbjct: 183 VCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAALV 242
Query: 247 VAG 249
           + G
Sbjct: 243 MDG 245

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 107/251 (42%), Gaps = 10/251 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GK+A+VT ++ GIG  +A      GA++V +   Q+ VD+ +   KA GI   G +C 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCD 91
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++E   + ++ +   + G ID+ V NA +      +++   +   ++ +I++ +  ++ 
Sbjct: 92  VTDEDGIQAMVAQIESEVGIIDILVNNAGI-IRRVPMIEMTAAQFRQVIDIDLNAPFIVS 150
Query: 130 QDAAPHM-QKG-SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           +   P M +KG   ++ I S+        ++ Y                E    + + N 
Sbjct: 151 KAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNG 210
Query: 187 VAPGFVPTHFAQAL--LGNDAVRKALE----GKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
           + PG++ T     L  L  D  R   +     KT   R G   ++             ++
Sbjct: 211 IGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFV 270
Query: 241 TGETLVVAGGM 251
            G  L V GG+
Sbjct: 271 NGHILYVDGGI 281

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 10/253 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEV 63
           M    + KV V+T  + G+G  +A R G E A VVI+  + +++ +D A ++++  G + 
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALD-AKKEVEEAGGQA 67
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINV 122
           I +   V+ E+   NL+   ++++G +DV + NA V NP  +  L       +K+ + N+
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTNL 125
Query: 123 KSSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
             + L  ++A  +  +     +V+ +SS+    P      Y                E A
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 180 PD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
           P   RVN + PG + T        +   R  +E    +  +G    +             
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 239 YITGETLVVAGGM 251
           Y+TG TL   GGM
Sbjct: 246 YVTGITLFADGGM 258

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 10/253 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEV 63
           M    + KV V+T  + G+G  +A R G E A VVI+  + +++ +D A ++++  G + 
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALD-AKKEVEEAGGQA 67
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINV 122
           I +   V+ E+   NL+   ++++G +DV + NA V NP  +  L       +K+ + N+
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTNL 125
Query: 123 KSSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
             + L  ++A  +  +     +V+ +SS+    P      Y                E A
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 180 PD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
           P   RVN + PG + T        +   R  +E    +  +G    +             
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 239 YITGETLVVAGGM 251
           Y+TG TL   GGM
Sbjct: 246 YVTGITLFADGGM 258

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 109/253 (43%), Gaps = 10/253 (3%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEV 63
           M    + KV V+T  + G+G  +A R G E A VVI+  + +++ +D A ++++  G + 
Sbjct: 9   MYTDLKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALD-AKKEVEEAGGQA 67
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINV 122
           I +   V+ E+   NL+   ++++G +DV + NA V NP  +  L       +K+ + N+
Sbjct: 68  IIVQGDVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLDN--WNKVIDTNL 125
Query: 123 KSSILLMQDAAPHMQKGS---SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
             + L  ++A  +  +     +V+ +SS+    P      Y                E A
Sbjct: 126 TGAFLGSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYA 185
Query: 180 PD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
           P   RVN + PG + T        +   R  +E    +  +G    +             
Sbjct: 186 PKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS 245
Query: 239 YITGETLVVAGGM 251
           Y+TG TL   GGM
Sbjct: 246 YVTGITLFADGGM 258

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 17/256 (6%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           KR +GK A++T S +GIG   AE    EGA+V I+     ++++A +    +G     + 
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGATVAIA---DIDIERARQAAAEIGPAAYAVQ 60
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+ +      I  TVE  G +D+ V NAA+   A  +  T+ES  +KL+ INV  ++ 
Sbjct: 61  XDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRES-YEKLFAINVAGTLF 119
Query: 128 LMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
            +Q AA       +G  ++  +S AG +  + +A+Y                ++      
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 184 VNCVAPGFVP-THF--AQALLGNDAVRKALEGKTL------LNRLGTTGNMXXXXXXXXX 234
           VN +APG V   H+    AL      R   E K L        R GT  ++         
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRXGTAEDLTGXAIFLAS 239
Query: 235 XXXXYITGETLVVAGG 250
               YI  +T  V GG
Sbjct: 240 AESDYIVSQTYNVDGG 255

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 5/244 (2%)
Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GK A+VT S +G+G   AE L   GA V+++  +   + ++V+ L   G +  G+   V+
Sbjct: 9   GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT 68
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +E   +    K   +   +D+ + NA +  Y   +++ +     K+ + N+ S+ L+ + 
Sbjct: 69  DELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLTSAFLVSRS 127
Query: 132 AAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
           AA  M     G  ++ I S+        +A Y                E A  + + N +
Sbjct: 128 AAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAI 187
Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVV 247
            PG++ T    AL+ +      ++  T   R G    +             YI G+ + V
Sbjct: 188 GPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYINGQIIYV 247
Query: 248 AGGM 251
            GG 
Sbjct: 248 DGGW 251

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 110/259 (42%), Gaps = 26/259 (10%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK---ALGIEVIGIICH 69
           KVA+VT   QGIG G++E+L  +G  + ++   Q+  ++A E +K   A   + + +   
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQE-EQAAETIKLIEAADQKAVFVGLD 61
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+++ +  + ID+  EK G  DV V NA +      LL+  E  L +++ +NV S    +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQIKP-LLEVTEEDLKQIYSVNVFSVFFGI 120
Query: 130 QDAAPHMQ----KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTR-V 184
           Q A+        KG  +   S  A    P  ++ Y                E+AP    V
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFP-ILSAYSTTKFAVRGLTQAAAQELAPKGHTV 179
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTL------------LNRLGTTGNMXXXXXXX 232
           N  APG V T   + +   DA    + GK +            L R     ++       
Sbjct: 180 NAYAPGIVGTGMWEQI---DAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFL 236
Query: 233 XXXXXXYITGETLVVAGGM 251
                 Y+TG+ ++V GGM
Sbjct: 237 ASENSNYVTGQVMLVDGGM 255

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 24/264 (9%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA-VEKLKA-----LGIEV 63
            +GKVAVVT ST GIGLG+A  L  +GA +V++       D A +EK++A      G++V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG----DAAEIEKVRAGLAAQHGVKV 57
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           +     +S  +  + L+D  V + GRID+ V NA +  + A +        D +  +N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS 116
Query: 124 SSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PHM+K     ++ I+S  G    +  + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAQ----ALLGNDAVRKALEGKTLLN------RLGTTGNMXXXXX 230
               N + PG+V +   +    AL   + V +    + LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMASR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 20/215 (9%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVV------------ISSRKQKNVDKAV 53
           M  R  GKVA ++ + +G G   A RL  EGA ++                  +++ +  
Sbjct: 9   MTGRVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETA 68
Query: 54  EKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV 113
           + +K L   ++     V + +  K+ +D  VE+ GR+D+ V NA V      L K +++V
Sbjct: 69  DLVKDLDRRIVTAQVDVRDFEALKSAVDSGVEQLGRLDIIVANAGVGTDGRKLHKIRDNV 128
Query: 114 LDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXX 170
              + +IN+      ++   PH+    +G S+V  SS+ G +       Y          
Sbjct: 129 WQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAAKHGVIGL 188
Query: 171 XXXXXXEMAPD-TRVNCVAPGFVPTHFAQALLGND 204
                 E+ P   RVN V    +PT  +  ++ ND
Sbjct: 189 MRAFAVELGPHMIRVNAV----LPTQVSTTMVMND 219

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 111/264 (42%), Gaps = 24/264 (9%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA-VEKLKA-----LGIEV 63
            +GKVAVVT ST GIGLG+A  L  +GA +V++       D A +EK++A      G++V
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFG----DAAEIEKVRAGLAAQHGVKV 57
Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           +     +S  +  + L+D  V + GRID+ V NA +  + A +        D +  +N+ 
Sbjct: 58  LYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLS 116
Query: 124 SSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           +       A PHM+K     ++ I+S  G    +  + Y                E A  
Sbjct: 117 AVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQ 176
Query: 182 -TRVNCVAPGFVPTHFAQ----ALLGNDAVRKALEGKTLLN------RLGTTGNMXXXXX 230
               N + PG+V     +    AL   + V +    + LL+      +  T   +     
Sbjct: 177 GITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAV 236
Query: 231 XXXXXXXXYITGETLVVAGGMASR 254
                    ITG T+ V GG  +R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 60.8 bits (146), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 90/224 (40%), Gaps = 24/224 (10%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVV----------------ISSRKQKN 48
           +M  R +GKVA VT + +G G   A RL  EGA ++                I +   ++
Sbjct: 4   SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPED 63
Query: 49  VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK 108
           + +  + +K     ++     V +    K  +D  VE+ GR+D+ V NA +      L K
Sbjct: 64  LAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123
Query: 109 TKESVLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXX 165
           T E    ++ +IN+      ++   PHM    +G S++  SS+ G +       Y     
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKH 183
Query: 166 XXXXXXXXXXXEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRK 208
                      E+     RVN V     PTH    +L N+   K
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVH----PTHVKTPMLHNEGTFK 223

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 80/153 (52%), Gaps = 12/153 (7%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-------AVEKLKALGI 61
           R  G    +T +++GIG  +A +   +GA++VI+++  +   K       A E+++A+G 
Sbjct: 42  RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGG 101
Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
           + +  I  V +EQ     ++K ++K+G ID+ V NA+      + L T    LD +  +N
Sbjct: 102 KALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISL-TNTLDTPTKRLDLMMNVN 160
Query: 122 VKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP 154
            + + L  +   P+++K S V  I +I+   PP
Sbjct: 161 TRGTYLASKACIPYLKK-SKVAHILNIS---PP 189

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 17/245 (6%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F  +  +VT   +GIGL +A+RL  +G  V ++ R       A + L   G+EV      
Sbjct: 33  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS----GAPKGL--FGVEV-----D 81
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++            E  G ++V V NA ++  A  L++  E   +K+   N+  +  + 
Sbjct: 82  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVA 140
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  MQ+     ++FI+S++G       A Y                E++  +   N 
Sbjct: 141 QRASRSMQRNKFGRMIFIASVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 200
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T   +AL  ++ +++         R+GT   +             YI+G  + 
Sbjct: 201 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 258
Query: 247 VAGGM 251
           V GGM
Sbjct: 259 VDGGM 263

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 14/245 (5%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT +++GIG  VA  L  +GA+VV ++  Q + +K     K  G +  G++ ++S+
Sbjct: 6   KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLNISD 65
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +  +N   +   +   ID+ V NA +     D L  + S  +  W+  + +++  +   
Sbjct: 66  IESIQNFFAEIKAENLAIDILVNNAGITR---DNLXXRXS--EDEWQSVINTNLSSIFRX 120
Query: 133 APHMQKGSS------VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVN 185
           +    +G        ++ I S+ G         Y                E+A  +  VN
Sbjct: 121 SKECVRGXXKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVN 180
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
            VAPGF+ T     L   D  +  +  K    ++G   ++             YITG+TL
Sbjct: 181 VVAPGFIATDXTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTL 238
Query: 246 VVAGG 250
            V GG
Sbjct: 239 HVNGG 243

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 11/251 (4%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE-KLKALGIEVIG 65
           A +F GK  ++T +++GIG  +A+ L   G  V I+ R    V  A++ +L+  G +   
Sbjct: 24  AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAV 83
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL--KTKESVLDKLWEINVK 123
           I    ++E      I   V+  G +   V NA V     D L  K K      + + N+ 
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGV---VRDKLAIKMKTEDFHHVIDNNLT 140
Query: 124 SSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-P 180
           S+ +  ++A   M K    SVV ++SI G +       Y                E A  
Sbjct: 141 SAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALR 200
Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
           + R N V PGF+ T     L   D ++        LNRLG+   +             YI
Sbjct: 201 NIRFNSVTPGFIETDMNANL--KDELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYI 258
Query: 241 TGETLVVAGGM 251
           TGETL V GG+
Sbjct: 259 TGETLKVNGGL 269

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 79/163 (48%), Gaps = 11/163 (6%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA--LGIEVIG 65
           K F G+ A VT    G+G+G+  +L  +G  V I+  +Q ++DKA+  L+A   G EV+G
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V++ +  K   D+   ++G + +   NA VN +   + ++     D L  +N+   
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQP-IEESSYDDWDWLLGVNLHGV 122
Query: 126 ILLMQDAAPHM--------QKGSSVVFISSIAGYQPPSAMAMY 160
           +  +    P M        QKG  VV  +S+A +    +  +Y
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIY 165

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/253 (22%), Positives = 106/253 (41%), Gaps = 11/253 (4%)
Query: 10  FQGKVAVVTAST--QGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIG 65
            +GKV VVT ++  +G+G+  A      GA+V I+  SR Q   +   E  K  GI+   
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKA 77
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
             C V + +  + L+   V  +G+ID F+ NA     +  L  + E+  + + ++++  +
Sbjct: 78  YKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEA-WNHVVQVDLNGT 136
Query: 126 ILLMQDAAPHM-QKGS-SVVFISSIAGY--QPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
               +    H  ++G+ S+V  +S++G+    P     Y V              E    
Sbjct: 137 FHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF 196
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
            RVN ++PG++ T  +  +      ++       + R G    +             Y T
Sbjct: 197 ARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYTT 254
Query: 242 GETLVVAGGMASR 254
           G  L++ GG  +R
Sbjct: 255 GADLLIDGGYTTR 267

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 103/245 (42%), Gaps = 17/245 (6%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F  +  +VT   +GIGL +A+RL  +G  V ++ R       A + L   G+EV      
Sbjct: 13  FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS----GAPKGL--FGVEV-----D 61
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++            E  G ++V V NA ++  A  L++  E   +K+   N+  +  + 
Sbjct: 62  VTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSADAF-LMRMTEEKFEKVINANLTGAFRVA 120
Query: 130 QDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           Q A+  MQ+     ++FI S++G       A Y                E++  +   N 
Sbjct: 121 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 180
Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           VAPG++ T   +AL  ++ +++         R+GT   +             YI+G  + 
Sbjct: 181 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 238
Query: 247 VAGGM 251
           V GGM
Sbjct: 239 VDGGM 243

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 95/224 (42%), Gaps = 17/224 (7%)
Query: 36  GASVVISSRKQKNVDKAVEKLKALGIEVIG---IICHVSNEQHRKNLIDKTVEKYGRIDV 92
           GA VVI        DK     +AL  E+ G   I+C V+ E   K L+ +T+ ++GR+D 
Sbjct: 33  GARVVI-------CDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDC 85
Query: 93  FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGS-SVVFISSIAGY 151
            V NA  +P      +T      +L E+N+  +  L + A P+++K   +V+ ISS+ G 
Sbjct: 86  VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA 145
Query: 152 QPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQAL--LGNDAVRK 208
              +    Y                + +P   RVNC++PG + T   + L  L  D  R 
Sbjct: 146 IGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDP-RA 204
Query: 209 ALEGKTLLNRLGTTGNMXX--XXXXXXXXXXXYITGETLVVAGG 250
           ++    L   LG  G                 + TG  L+V GG
Sbjct: 205 SIREGMLAQPLGRMGQPAEVGAAAVFLASEANFCTGIELLVTGG 248

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 6/249 (2%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R +GK+A+VT ++ GIG   A     EGA VV+++R    + +  +++   G E   + 
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALA 63
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V +E   + L++  V ++G +D    NA       ++         +  + N+ S+ L
Sbjct: 64  GDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFL 123
Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSA-MAMYGVXXXXXXXXXXXXXXEM-APDTR 183
             +   P +    G S+ F SS  G+    A +A Y                E+ A   R
Sbjct: 124 AAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIR 183
Query: 184 VNCVAPGF--VPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
           VN + PG    P +FA         R  +EG   L R+     +             ++T
Sbjct: 184 VNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASFVT 243
Query: 242 GETLVVAGG 250
           G  L+  GG
Sbjct: 244 GAALLADGG 252

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 102/262 (38%), Gaps = 27/262 (10%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M    + KV +VT ++ GIG  +AER   EG+ V+  S           + K   IE   
Sbjct: 9   MFSDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIE--- 59
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
             C V+N    K  ID   ++YG I V V NA +  Y   +         ++ ++N+   
Sbjct: 60  --CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGK-IESMSMGEWRRIIDVNLFGY 116
Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTR 183
               + A P+M   +  S+V ISS+         + Y                + AP  R
Sbjct: 117 YYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLR 176
Query: 184 VNCVAPGFVPTHF----AQALLGNDAVRKALEGKTL-------LNRLGTTGNMXXXXXXX 232
            N V P  + T      A+  +G+D +R  +E K         + R+G    +       
Sbjct: 177 CNAVCPATIDTPLVRKAAELEVGSDPMR--IEKKISEWGHEHPMQRIGKPQEVASAVAFL 234
Query: 233 XXXXXXYITGETLVVAGGMASR 254
                 +ITG  L V GG++ R
Sbjct: 235 ASREASFITGTCLYVDGGLSIR 256

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 15/253 (5%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII- 67
           R Q KVA++T    GIG   A+     GA VVI+     +  K    + +   +VI  + 
Sbjct: 13  RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP--DVISFVH 70
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEINVKS 124
           C V+ ++  +NL+D T+ K+G++D+   N  V    PY+  +L+       ++ +INV  
Sbjct: 71  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYS--ILEAGNEDFKRVMDINVYG 128
Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMA-MYGVXXXXXXXXXXXXXXEMAP- 180
           + L+ + AA  M   K  S+VF +SI+ +     ++ +Y                E+   
Sbjct: 129 AFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEY 188
Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVR---KALEGKTLLNRLGTTGNMXXXXXXXXXXXX 237
             RVNCV+P  V +     + G D+ R    A +   L   L    ++            
Sbjct: 189 GIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDES 248
Query: 238 XYITGETLVVAGG 250
            Y++G  LV+ GG
Sbjct: 249 KYVSGLNLVIDGG 261

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 20/257 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI-IC 68
            QGK+AVVTA + G+G   A  L   GA +++ SR ++ ++ A  ++ +L   V G  + 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL---VSGAQVD 61
Query: 69  HVSNEQHRKNLIDKTVEK---YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
            V+ +      ID+  EK    G  D+ V +    P     ++      D+ + +  +S+
Sbjct: 62  IVAGDIREPGDIDRLFEKARDLGGADILVYSTG-GPRPGRFMELGVEDWDESYRLLARSA 120
Query: 126 ILLMQDAAPHM-QKG-SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
           + + + AA  M +KG   +V+I S+   +P   +A+  +              E+AP   
Sbjct: 121 VWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGV 180
Query: 183 RVNCVAPGFVPTHFAQALLGNDAVR---------KALEGKTLLNRLGTTGNMXXXXXXXX 233
            VN V P  + T   ++L    A R         K++  +  + R+G    +        
Sbjct: 181 TVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA 240
Query: 234 XXXXXYITGETLVVAGG 250
                +ITG  + V GG
Sbjct: 241 SEKASFITGAVIPVDGG 257

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 110/257 (42%), Gaps = 27/257 (10%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +R  GK A+VT + QGIG  +A RL  +GA+V++S     N + A     ++G +   I 
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVS---DINAEGAKAAAASIGKKARAIA 58
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA----DLLKTKESVLDKLWEINVK 123
             +S+    K L  +     G ID+ V NA++ P+ A    DL   +     K+ ++N+ 
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWR-----KIIDVNLT 113
Query: 124 SSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + ++ +     M+   K   V+ I+S   +     MA Y                E+  
Sbjct: 114 GTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGK 173
Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDA-----VRKALEGKTLLNRLGTTGNMXXXXXXXXX 234
            +   N V PG + +   +A   N+A     + +A++GK      G   ++         
Sbjct: 174 YNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGK------GQPEHIADVVSFLAS 227
Query: 235 XXXXYITGETLVVAGGM 251
               +ITG+TL V  GM
Sbjct: 228 DDARWITGQTLNVDAGM 244

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 97/219 (44%), Gaps = 24/219 (10%)
Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G+V VVT +++GIG G+A +L   GA+V I+ R    +    ++ ++LG + + ++C  S
Sbjct: 5   GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSS 64
Query: 72  NEQHRKNLIDKT-VEKYGRIDVFVLNAA------VNPYAADLLKTKESVLDKLWEINVKS 124
            E   ++L ++   E+ GR+DV V NA       +N       +T  S+ D +  + ++ 
Sbjct: 65  QESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRG 124
Query: 125 SILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT 182
                   A  M       +V ISS     P S   M+ V              + A + 
Sbjct: 125 HYFCSVYGARLMVPAGQGLIVVISS-----PGSLQYMFNVPYGVGKAACDKLAADCAHEL 179
Query: 183 R---VNCVA--PGFVPT-----HFAQALLGNDAVRKALE 211
           R   V+CV+  PG V T     H A+  +  D V K  +
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFK 218

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 101/258 (39%), Gaps = 27/258 (10%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            + KV +VT ++ GIG  +AER   EG+ V+  S           + K   IE     C 
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIE-----CD 54
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+N    K  ID   ++YG I V V NA +  Y   +         ++ ++N+       
Sbjct: 55  VTNPDQVKASIDHIFKEYGSISVLVNNAGIESYGK-IESMSMGEWRRIIDVNLFGYYYAS 113
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCV 187
           + A P+M   +  S+V ISS+         + Y                + AP  R N V
Sbjct: 114 KFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAV 173
Query: 188 APGFVPTHF----AQALLGNDAVRKALEGKT-------LLNRLGTTGNMXXXXXXXXXXX 236
            P  + T      A+  +G+D +R  +E K         + R+G    +           
Sbjct: 174 CPATIDTPLVRKAAELEVGSDPMR--IEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231
Query: 237 XXYITGETLVVAGGMASR 254
             +ITG  L V GG++ R
Sbjct: 232 ASFITGTCLYVDGGLSIR 249

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 100/235 (42%), Gaps = 21/235 (8%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVV-------------ISSRKQKNVDK 51
           +MA + +G+VA +T + +G G   A R+  EGA ++                    ++ +
Sbjct: 4   SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSE 63
Query: 52  AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTK 110
            V  ++A    ++  +    +    + ++D  V   GR+D+ V NA V  P A D + T 
Sbjct: 64  TVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDI-TP 122
Query: 111 ESVLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXX 167
           E   D + +INV  +   +   AP +    +G S++ ISS AG +    M  Y       
Sbjct: 123 EDFRDVM-DINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAV 181
Query: 168 XXXXXXXXXEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGT 221
                    E+   + RVN V PG V T      +   AV +A+E    L+ + T
Sbjct: 182 TGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVT-AVGQAMETNPQLSHVLT 235

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 57.8 bits (138), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 9/218 (4%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K   G++ ++T +  GIG   A       + +V+    +  +++   K K LG +V   +
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
              SN +   +   K   + G + + V NA V  Y +DL  T++  ++K +E+NV +   
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHFW 145
Query: 128 LMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA----PD 181
             +   P M K +   +V ++S AG+     +  Y                E+A      
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL 219
            +  C+ P FV T F +    + ++   LE + ++NRL
Sbjct: 206 VKTTCLCPNFVNTGFIKN--PSTSLGPTLEPEEVVNRL 241

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT + +GIG  +A  LG  G  V+++ +   ++ ++ V  +K  G +   +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +V   +    + ++ V+ +G++D+   N+ V  +      T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 MQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            ++A  H++ G  ++ + SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHFAQALL 201
           VAPG + T    A+ 
Sbjct: 206 VAPGGIKTDMYHAVC 220

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE--VIG 65
           +R++ ++A+VT ++ GIG  VA  L  +G  VV  +R   N+++   + K+ G    +I 
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 87
Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
             C +SNE+   ++      ++  +D+ + NA +      LL    S    ++ +NV + 
Sbjct: 88  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL-ARPDTLLSGSTSGWKDMFNVNVLAL 146
Query: 126 ILLMQDAAPHMQK----GSSVVFISSIAGYQ--PPSAMAMYGVXXXXXXXXXXXXXXEM- 178
            +  ++A   M++       ++ I+S++G++  P S    Y                E+ 
Sbjct: 147 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 206
Query: 179 --APDTRVNCVAPGFVPTHFAQALLGNDAVRKA 209
                 R  C++PG V T FA  L   D  + A
Sbjct: 207 EAQTHIRATCISPGVVETQFAFKLHDKDPEKAA 239

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT + +GIG  +A  LG  G  V+++ +   ++ ++ V  +K  G +   +  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +V   +    + ++ V+ +G++D+   N+ V  +      T E   D+++ IN +    +
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEE-FDRVFTINTRGQFFV 145
Query: 129 MQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNC 186
            ++A  H++ G  ++ + SI G  +     A+Y                +MA     VN 
Sbjct: 146 AREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV 205
Query: 187 VAPGFVPTHFAQALL 201
           VAPG + T    A+ 
Sbjct: 206 VAPGGIKTDMYHAVC 220

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M      KV V++     +G  +A R   +GA +V+++R  + ++   +++   G   +
Sbjct: 4   SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRAL 63
Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   ++++    +L+D+T++ YGR+DV + NA   P       T    +    E+ V  
Sbjct: 64  SVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123
Query: 125 SILLMQDAAPHMQKG-SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
           ++ L+Q   P +++   +VV ++S+      +    Y +              E+     
Sbjct: 124 ALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183
Query: 183 RVNCVAPGFV 192
           RVN V PG++
Sbjct: 184 RVNSVLPGYI 193

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/259 (24%), Positives = 101/259 (38%), Gaps = 25/259 (9%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             G+ A+VT  ++GIG  +A  L   GA+V I+          V  L+  G  V      
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAV---EVD 66
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW----EINVKSS 125
           V+        + K ++  G  D+   NA V+      ++    + D+ W    ++N +  
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGVST-----MRPAVDITDEEWDFNFDVNARGV 121
Query: 126 ILLMQDAAPHMQKGSS---VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-D 181
            L  Q A  H    ++   +V  +S+A       +A Y                EMAP +
Sbjct: 122 FLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKN 181
Query: 182 TRVNCVAPGFVPTHFAQ-------ALLG--NDAVRKALEGKTLLNRLGTTGNMXXXXXXX 232
            RVNCV PGFV T   +        L G   +AVR      T L R+    ++       
Sbjct: 182 IRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFL 241
Query: 233 XXXXXXYITGETLVVAGGM 251
                 ++TG+ + V GG+
Sbjct: 242 ASDAARFMTGQGINVTGGV 260

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS--RKQKNVDKA---VEKLKAL--- 59
            R QGKVA +T + +G G   A RL  +GA +V     R+Q N+D A    E+LK     
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRL 101
Query: 60  ----GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
               G  +I     V +    + ++D+ + ++G ID+ V N  ++     +     S+ D
Sbjct: 102 VEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVV-----SLTD 156
Query: 116 KLWEINVKSSILLMQDAA----PHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXX 168
           + W   ++++++    A     P M    +G SV+F+SS  G +     + Y        
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216
Query: 169 XXXXXXXXEMA-PDTRVNCVAPGFVPTHFA 197
                   E+   + RVN V PG V T  A
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMA 246

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 97/244 (39%), Gaps = 11/244 (4%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII-CHVS 71
           ++A+VT +++GIG  +A  L   GA V ++          V    A        +   VS
Sbjct: 29  RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS 88
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            E   + L    +E++GR+DV V NA +      LL+ K      + ++N+    L  + 
Sbjct: 89  QESEVEALFAAVIERWGRLDVLVNNAGITRDTL-LLRMKRDDWQSVLDLNLGGVFLCSRA 147
Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVA 188
           AA  M  Q+   ++ I+S+ G       A Y                E+A     VN VA
Sbjct: 148 AAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVA 207
Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXX-XXXYITGETLVV 247
           PGF+ T     L    A  K LE    L R G    +              YITG+ + +
Sbjct: 208 PGFIATDMTSEL----AAEKLLE-VIPLGRYGEAAEVAGVVRFLAADPAAAYITGQVINI 262
Query: 248 AGGM 251
            GG+
Sbjct: 263 DGGL 266

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 83/195 (42%), Gaps = 13/195 (6%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGI 66
           RF  +V ++T    G+G   A RL  EGA  S+V  S +     KA     A   EV+  
Sbjct: 10  RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 69
Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
           +  VS+E   +  +  T E++GRID F  NA +            +  DK+  IN++   
Sbjct: 70  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 129
Query: 127 LLMQDAAPHMQKGSS--VVFISSIAGY-----QPPSAMAMYGVXXXXXXXXXXXXXXEMA 179
           L ++     M++  S  VV  +S+ G      Q   A A +GV               + 
Sbjct: 130 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGI- 188
Query: 180 PDTRVNCVAPGFVPT 194
              R+N +APG + T
Sbjct: 189 ---RINAIAPGAIWT 200

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 84/197 (42%), Gaps = 18/197 (9%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A VT  + GIGL VA  L   G +V   +R  KNV  AV+ L+A G +V G  C V++
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTS 84
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVN--PYAADLLKTKESVLDKLW----EINVKSSI 126
                  +   VE++G I + V +A  N     ADL        D LW    + N+    
Sbjct: 85  TDEVHAAVAAAVERFGPIGILVNSAGRNGGGETADL-------DDALWADVLDTNLTGVF 137
Query: 127 LLMQDA--APHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PD 181
            + ++   A  M++     +V I+S  G Q     A Y                E+A   
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197
Query: 182 TRVNCVAPGFVPTHFAQ 198
             VN V PG+V T  A+
Sbjct: 198 ITVNAVCPGYVETPMAE 214

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 54.7 bits (130), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 103/251 (41%), Gaps = 31/251 (12%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           + G+  +VT  + GIG  +A +    GA VV                 ALG++  G+   
Sbjct: 9   YAGQQVLVTGGSSGIGAAIAMQFAELGAEVV-----------------ALGLDADGVHAP 51
Query: 70  VSNEQHRKNL-------IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
                 R+ L       + +  E   R+DV V NA ++    D  +   +  +++  +N+
Sbjct: 52  RHPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNL 108
Query: 123 KSSILLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
            +++L  Q A P + Q+G S++ I+S+      +    Y                E A +
Sbjct: 109 SAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAE 168
Query: 182 -TRVNCVAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
             RVN +APG++ T     L  + +A R+ ++ +T L R G    +             +
Sbjct: 169 RIRVNAIAPGWIDTPLGAGLKADVEATRRIMQ-RTPLARWGEAPEVASAAAFLCGPGASF 227
Query: 240 ITGETLVVAGG 250
           +TG  L V GG
Sbjct: 228 VTGAVLAVDGG 238

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 54.3 bits (129), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 107/253 (42%), Gaps = 20/253 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +G+ A+VT +  G+G  +A  L   GA VV ++R+    D+ ++ +   G     ++  
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLID 64
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            ++    K+            D+ V NA +    AD ++  E   D++ ++N+K+     
Sbjct: 65  FADPLAAKDSFTDA-----GFDILVNNAGI-IRRADSVEFSELDWDEVMDVNLKALFFTT 118
Query: 130 QDAAPHM-QKGSS--VVFISSIAGYQ-----PPSAMAMYGVXXXXXXXXXXXXXXEMAPD 181
           Q  A  +  KG S  VV I+S+  +Q     P    A +GV                A  
Sbjct: 119 QAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWA----AKG 174
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
             VN +APG++ T+  +AL  + A  KA+  +    R G + ++             Y+ 
Sbjct: 175 INVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVH 234
Query: 242 GETLVVAGGMASR 254
           G  L V GG  +R
Sbjct: 235 GAILNVDGGWLAR 247

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 104/256 (40%), Gaps = 6/256 (2%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M   FQ +  +VT    GIG GVA  L   GASV+I  R    +  AV++L+ALG    
Sbjct: 4   SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG 63
Query: 65  GI---ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
            I      ++NE      +D     +GR+   V  A  +     + +       +  ++N
Sbjct: 64  AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLN 123
Query: 122 VKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM- 178
           V  ++ +++ AA  M +  G S V ISSIA          YGV              E+ 
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183
Query: 179 APDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXX 238
           A   RVN + PG + T    A+  +  +       T L R G   ++             
Sbjct: 184 ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS 243
Query: 239 YITGETLVVAGGMASR 254
           ++TG+ + V GG   R
Sbjct: 244 FVTGQVINVDGGQMLR 259

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 90/239 (37%), Gaps = 17/239 (7%)
Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
           +VT   +GIGL +A      G  V I+ R  +  +             + + C +++ + 
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-----------FLAVKCDITDTEQ 73
Query: 76  RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPH 135
            +    +  E +G ++V + NA V      L++  E     + E N+  +  +++ A   
Sbjct: 74  VEQAYKEIEETHGPVEVLIANAGVTKDQL-LMRMSEEDFTSVVETNLTGTFRVVKRANRA 132
Query: 136 M--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFV 192
           M   K   VV ISS+ G    +  A Y                E+   +   N VAPGFV
Sbjct: 133 MLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFV 192
Query: 193 PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAGGM 251
            T   + L   D  R  +  +  L R      +             YITG  + V GG+
Sbjct: 193 DTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYITGAVIPVDGGL 249

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-------QKNVDKAVEKLKALGIE 62
             GK   +T +++GIGL +A R   +GA+V I+++           +  A   + A G +
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQ 63
Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
            + + C +  E   +  +  TV+ +G ID+ V NA+   +    L T     D   ++N 
Sbjct: 64  GLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI-WLRGTLDTPXKRFDLXQQVNA 122
Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAM--AMYG 161
           + S +  Q   PH+ +  +      I    PP ++  A +G
Sbjct: 123 RGSFVCAQACLPHLLQAPN----PHILTLAPPPSLNPAWWG 159

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 8/243 (3%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + +AV  L+A   E I ++ 
Sbjct: 3   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA---EAIAVVA 59
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+ +  + +  + +E++GR+      A V  ++A          +K+  +N+  S L+
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVA-HSALSWNLPLEAWEKVLRVNLTGSFLV 118
Query: 129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNCV 187
            + A   +++G S+V   S+AG      +A Y                E+A    RVN +
Sbjct: 119 ARKAGEVLEEGGSLVLTGSVAGLG-AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVL 177
Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVV 247
            PG + T     L       +   G + L R G    +             YITG+ L V
Sbjct: 178 LPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 235
Query: 248 AGG 250
            GG
Sbjct: 236 DGG 238

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 89/207 (42%), Gaps = 28/207 (13%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG-- 65
           K   GKVAVVT + +GIG  +AE    +GA+VV       +VD A E LK +  +V G  
Sbjct: 209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVV-----AIDVDGAAEDLKRVADKVGGTA 263
Query: 66  IICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVL----DKLWEI 120
           +   V+ +     +     E + G++D+ V NA +         T++ +L    +K W+ 
Sbjct: 264 LTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI---------TRDKLLANMDEKRWDA 314
Query: 121 NVKSSILLMQDAAPHM------QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
            +  ++L  Q     +       +G  V+ +SS+AG         Y              
Sbjct: 315 VIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEAL 374
Query: 175 XXEMAPD-TRVNCVAPGFVPTHFAQAL 200
              +A     +N VAPGF+ T   +A+
Sbjct: 375 APVLADKGITINAVAPGFIETKMTEAI 401

>pdb|3SC4|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase (A0qtm2 Homolog) Mycobacterium Thermoresistibile Length = 285

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-------AVEKLKALGIE 62
            +GK   ++  ++GIGL +A+R+  +GA+V + ++  +   K       A ++++  G +
Sbjct: 7   LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQ 66
Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA-AVNPYAADLLKTKESVLDKLWEIN 121
            + I+  + +       + KTVE++G ID+ V NA A+N  + + +  K    D +  I 
Sbjct: 67  ALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKR--FDLMNGIQ 124
Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQP------PSAMAMYGV 162
           V+ +  + Q   PHM  +    ++ +S     +P      P  MA YG+
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGM 173

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 17/162 (10%)
Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGA-------------SVVISSRKQKNVDKAV 53
           A   QG+VA +T + +G G   A RL  EGA             SV  +    +++D+  
Sbjct: 10  AGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETA 69
Query: 54  EKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV 113
             ++  G + +  +  V ++   + L+   +E++GR+DV V NA V  +      T E  
Sbjct: 70  RLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQ- 128
Query: 114 LDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQ 152
            D +  +N+  +   ++   P M     G S+V +SS AG +
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK 170

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 93/244 (38%), Gaps = 8/244 (3%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK-ALGIEVIGIICHVS 71
           KVA +T    GIG  +AE     G   VI+SR    V  A  KL  A G   + +   V 
Sbjct: 28  KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR 87
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEINVKSSILL 128
                   +D+ ++++GRID+ +  AA N   P  A      ++V+D         S +L
Sbjct: 88  APPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVL 147
Query: 129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCV 187
            +        G  +V I++  G +  +     G               E  P + RVN +
Sbjct: 148 YEKF--FRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSL 205
Query: 188 APGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLV 246
           APG +  T   + L G  A        + L RLG    +             Y+TG  LV
Sbjct: 206 APGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAVLV 265
Query: 247 VAGG 250
             GG
Sbjct: 266 ADGG 269

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKA-LGIEVIGII 67
            +GK AVVT ST GIGL +A  L   GA VVI+   Q +++++    L++  G++   + 
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGVKAYYLN 61
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----INVK 123
             +S+ Q  ++ I K  E  G +D+ V NA +   A      +E  +DK W     +N+ 
Sbjct: 62  ADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTA----PIEEFPVDK-WNAIIALNLS 116
Query: 124 SSILLMQDAAPHMQK 138
           +       A P MQK
Sbjct: 117 AVFHGTAAALPIMQK 131

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 45/192 (23%), Positives = 84/192 (43%), Gaps = 9/192 (4%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA---VEKLKALGIEVIGII 67
           + KV V+    + +G   A+   LE  ++V+   + K+ D A    ++L+  G +V    
Sbjct: 10  KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQ 69
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +SNE+    L D   +++G++D+  +N         +++T E+  D +  IN K +  
Sbjct: 70  SDLSNEEEVAKLFDFAEKEFGKVDI-AINTVGKVLKKPIVETSEAEFDAMDTINNKVAYF 128
Query: 128 LMQDAAPHMQKGSSVVFISS--IAGYQPPSAMAMYGVXXXXXXXXXXXXXXE-MAPDTRV 184
            ++ AA HM     ++ I++  +A Y      + Y                E M     V
Sbjct: 129 FIKQAAKHMNPNGHIITIATSLLAAY--TGFYSTYAGNKAPVEHYTRAASKELMKQQISV 186
Query: 185 NCVAPGFVPTHF 196
           N +APG + T F
Sbjct: 187 NAIAPGPMDTSF 198

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 7/186 (3%)
Query: 12  GKVAVVTASTQGIGLGVAERL-GLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
           GKV +VT  ++GIG  + + L  L+  +VV   +R +  + K  EK    G     ++  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           ++ +   K L++  V+ +G+ID  V NA V     ++ +   +   KL++IN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118
Query: 130 QDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVA 188
             A P ++K   +VVF+SS A     S+   YG               E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177
Query: 189 PGFVPT 194
           PG V T
Sbjct: 178 PGIVDT 183

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +  +  G +D+ +LN   N  + +L       + K  E+N  S ++L
Sbjct: 89  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVL 147
Query: 129 MQDAAPHM-QKGSSVVFISSIAG 150
              A P + Q   S+V +SS+AG
Sbjct: 148 TVAALPMLKQSNGSIVVVSSLAG 170

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 146
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 147 YVVLTVAALPMLKQSNGSIVVVSSLAG 173

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 146
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 147 YVVLTVAALPMLKQSNGSIVVVSSLAG 173

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 82  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 136
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 137 YVVLTVAALPMLKQSNGSIVVVSSLAG 163

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 97/257 (37%), Gaps = 13/257 (5%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV-- 63
           M  R +  +A+VT +  GIG  V+ RL  EGA+V      +    + V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 64  -----IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
                      VS  +  + L+++    + R    V++ A       LL   E   DK+ 
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVI 120
Query: 119 EINVKSSILLMQDAAPHMQKG---SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXX 175
            +N+K + L+ Q AA  +       S++ ISSI G         Y               
Sbjct: 121 AVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAA 180
Query: 176 XEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXX 234
            E+     R N V PGF+ T   Q +     V K  E    +  LG   ++         
Sbjct: 181 RELGRHGIRCNSVLPGFIATPMTQKVP-QKVVDKITE-MIPMGHLGDPEDVADVVAFLAS 238
Query: 235 XXXXYITGETLVVAGGM 251
               YITG ++ V GG+
Sbjct: 239 EDSGYITGTSVEVTGGL 255

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +  +  G +D+ +LN   N  + +L       + K  E+N  S ++L
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVL 144
Query: 129 MQDAAPHM-QKGSSVVFISSIAG 150
              A P + Q   S+V +SS+AG
Sbjct: 145 TVAALPMLKQSNGSIVVVSSLAG 167

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 67  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 121
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 122 YVVLTVAALPMLKQSNGSIVVVSSLAG 148

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 140
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 141 YVVLTVAALPMLKQSNGSIVVVSSLAG 167

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 126
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 127 YVVLTVAALPMLKQSNGSIVVVSSLAG 153

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 3/153 (1%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  I K  +  G +D+ +LN  +   +  L       + ++ E+N  S +++
Sbjct: 76  TMEDMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHDDIHSVRRVMEVNFLSYVVM 134
Query: 129 MQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMY 160
              A P + Q   S+  ISS+AG      +A Y
Sbjct: 135 STAALPMLKQSNGSIAVISSLAGKMTQPMIAPY 167

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 126
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 127 YVVLTVAALPMLKQSNGSIVVVSSLAG 153

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 75  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 129
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 130 YVVLTVAALPMLKQSNGSIVVVSSLAG 156

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 75/153 (49%), Gaps = 15/153 (9%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS---------RKQKNVDKAVEKLKAL 59
           R+ G+VAVVT +  G+G   A      GA VV++            Q+  D  V++++  
Sbjct: 16  RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA 75
Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G E +     V +      +I+  ++ +GR+D+ V NA +      L+KT E   + + +
Sbjct: 76  GGEAVADYNSVIDGAK---VIETAIKAFGRVDILVNNAGI-LRDRSLVKTSEQDWNLVND 131
Query: 120 INVKSSILLMQDAAPHMQKGS--SVVFISSIAG 150
           +++K S    Q A P+M+K +   ++  SS +G
Sbjct: 132 VHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG 164

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 11/147 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG      I  
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVL----NAAVNPYAADLLKTKESVLDKLWEINVKS 124
            + +    +  + +  +  G +D+ +L    N ++N +  D+   ++S+     E+N  S
Sbjct: 73  TMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSM-----EVNFLS 127
Query: 125 SILLMQDAAPHM-QKGSSVVFISSIAG 150
            ++L   A P + Q   S+V +SS+AG
Sbjct: 128 YVVLTVAALPMLKQSNGSIVVVSSLAG 154

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  I K  +  G +D+ +LN  +   +  L       + ++ E+N  S +++
Sbjct: 67  TMEDMTFAEQFIVKAGKLMGGLDMLILN-HITQTSLSLFHDDIHSVRRVMEVNFLSYVVM 125
Query: 129 MQDAAPHM-QKGSSVVFISSIAG 150
              A P + Q   S+  ISS+AG
Sbjct: 126 STAALPMLKQSNGSIAVISSLAG 148

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 105/256 (41%), Gaps = 27/256 (10%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +R  GK A+VT + QGIG  +A RL  +GA+V++S     N + A     ++G +   I 
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVS---DINAEGAKAAAASIGKKARAIA 58
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA----DLLKTKESVLDKLWEINVK 123
             +S+    K L  +     G ID+ V NA++ P+ A    DL   +     K+ ++N+ 
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWR-----KIIDVNLT 113
Query: 124 SSILLMQ---DAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
            + ++ +   D      K   V+ I+S   +      A Y                E+  
Sbjct: 114 GTFIVTRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGK 173
Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVR-----KALEGKTLLNRLGTTGNMXXXXXXXXX 234
            +   N V PG + +   +A   N+A       +A +GK      G   ++         
Sbjct: 174 YNITANAVTPGLIESDGVKASPHNEAFGFVEXLQAXKGK------GQPEHIADVVSFLAS 227
Query: 235 XXXXYITGETLVVAGG 250
               +ITG+TL V  G
Sbjct: 228 DDARWITGQTLNVDAG 243

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 12/218 (5%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV-EKLKA-LGIEVIGI 66
           R QGKVA+VT    G+GL V + L  EGA V  S     ++++A  ++L A LG   + +
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFS-----DINEAAGQQLAAELGERSMFV 57
Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              VS+E     ++     + G ++V V NA +     D+   +     +L +IN +S  
Sbjct: 58  RHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGI-LLPGDMETGRLEDFSRLLKINTESVF 116
Query: 127 LLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD---T 182
           +  Q     M++ G S++ ++S++ + P    A Y                         
Sbjct: 117 IGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAI 176
Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG 220
           RVN + P  + T   QA L     ++ +     LNR G
Sbjct: 177 RVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAG 214

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 14/151 (9%)
Query: 23  GIGLGVAERLGLEGAS-----------VVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           G G G+   + LE A            +V+SSR   +++K   + +A G     I   +S
Sbjct: 9   GAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADIS 68
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    + L    VE+YG ID  V NA V  + A L    E   D     N+K +  L Q 
Sbjct: 69  DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA-LSDLTEEDFDYTMNTNLKGTFFLTQA 127
Query: 132 AAPHMQKGSS--VVFISSIAGYQPPSAMAMY 160
               M++  S  + FI+S+A  +     ++Y
Sbjct: 128 LFALMERQHSGHIFFITSVAATKAFRHSSIY 158

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 101/252 (40%), Gaps = 19/252 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK  ++T   +G+G   A +    GA VV++       ++     + LG         
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQHLD 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV--LDKLWEINVKSSIL 127
           V+ E+  + ++    E++G +D  V NA +   +  +    ESV    K+ EIN+    +
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVEINLTGVFI 116
Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
            M+   P M+   G S+V ISS AG    +  + YG               E+  D  RV
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEG---KTLLNRLGTTGNMXXXXXXXXXXXXXYIT 241
           N V PG   T     +     +R+  EG    T + R+G  G +             Y+T
Sbjct: 177 NSVHPGMTYT----PMTAETGIRQG-EGNYPNTPMGRVGEPGEIAGAVVKLLSDTSSYVT 231
Query: 242 GETLVVAGGMAS 253
           G  L V GG  +
Sbjct: 232 GAELAVDGGWTT 243

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/251 (21%), Positives = 98/251 (39%), Gaps = 22/251 (8%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           +VA VT    G+G  ++ RL   G +V +S S +  +V   +   +  G +       V+
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVA 85
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + +  +   +K +  +G++DV + NA +   A  +  TK       W+  +++ +  M +
Sbjct: 86  DFESCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGD-----WDAVMRTDLDAMFN 140
Query: 132 AAPHMQKG------SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
                  G        +V I S+ G +     A Y                E A     V
Sbjct: 141 VTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTL----LNRLGTTGNMXXXXXXXXXXXXXYI 240
           N V+PG++ T   +A+      +  LE K L    + RLG    +             ++
Sbjct: 201 NTVSPGYLATAMVEAV-----PQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFV 255
Query: 241 TGETLVVAGGM 251
           TG  L + GGM
Sbjct: 256 TGADLAINGGM 266

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 48.1 bits (113), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 6/192 (3%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GK A+VT ST GIGLG+A+ L   GA++V++         A+ ++   G++ +     
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPAD 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S+    + L      ++G +D+ V NA +  + A + +      DK+  +N+ +     
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGT 118
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTRVNC 186
           + A P M  +    ++ I+S+ G    +  A Y                E A  +   N 
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA 178
Query: 187 VAPGFVPTHFAQ 198
           + PG+V T   Q
Sbjct: 179 ICPGWVLTPLVQ 190

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVS 71
           KVAV+T +++GIG  +A  L  +G ++ + +R    ++K A E ++  G+EV      VS
Sbjct: 25  KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 84
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
             +  +    K +E++G +DV V NA +  Y   L +  E    ++ E+N+      ++ 
Sbjct: 85  KAESVEEFSKKVLERFGDVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKA 143
Query: 132 AAPHMQK--GSSVVFISSIAGYQPPSAMAMYG---VXXXXXXXXXXXXXXEMAPDTRVNC 186
               +++  G ++V  S ++    P     YG   V                 PD R   
Sbjct: 144 FLDSLKRTGGLALVTTSDVSARLIP-----YGGGYVSTKWAARALVRTFQIENPDVRFFE 198
Query: 187 VAPGFVPTHF 196
           + PG V T+F
Sbjct: 199 LRPGAVDTYF 208

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-AVEKLKALGIEVIGIICHVS 71
           KVAV+T +++GIG  +A  L  +G ++ + +R    ++K A E ++  G+EV      VS
Sbjct: 3   KVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS 62
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
             +  +    K +E++G +DV V NA +  Y   L +  E    ++ E+N+      ++ 
Sbjct: 63  KAESVEEFSKKVLERFGDVDVVVANAGLG-YFKRLEELSEEEFHEMIEVNLLGVWRTLKA 121
Query: 132 AAPHMQK--GSSVVFISSIAGYQPPSAMAMYG---VXXXXXXXXXXXXXXEMAPDTRVNC 186
               +++  G ++V  S ++    P     YG   V                 PD R   
Sbjct: 122 FLDSLKRTGGLALVTTSDVSARLIP-----YGGGYVSTKWAARALVRTFQIENPDVRFFE 176
Query: 187 VAPGFVPTHF 196
           + PG V T+F
Sbjct: 177 LRPGAVDTYF 186

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 105/251 (41%), Gaps = 15/251 (5%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIIC 68
           FQGKVA +T    G+G G+   L   GA  VI+SRK   +    E++ +  G +V  I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +    +N + + ++  G  ++ + NAA N + +   +   +    + +I +  +  +
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142
Query: 129 MQDAAPHM---QKGSSVVFISSI-----AGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
             +    +   QKG++ + I++I     +G+  PSA A  GV               M  
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGM-- 200
Query: 181 DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
             R N + PG + T  A + L       K + G+    RLGT   +             +
Sbjct: 201 --RFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASW 258
Query: 240 ITGETLVVAGG 250
           I G  +   GG
Sbjct: 259 INGAVIKFDGG 269

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 25/252 (9%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVV--ISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           ++A VT    GIG  + +RL  +G  VV        + V K +E  KALG +      +V
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRV-KWLEDQKALGFDFYASEGNV 72
Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL----WEINVKSSI 126
            +    K   DK   + G IDV V NA +         T++ V  K+    W+  + +++
Sbjct: 73  GDWDSTKQAFDKVKAEVGEIDVLVNNAGI---------TRDVVFRKMTREDWQAVIDTNL 123
Query: 127 LLMQDAAPHMQKG------SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
             + +    +  G        ++ ISS+ G +       Y                E+A 
Sbjct: 124 TSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVAT 183
Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
               VN V+PG++ T   +A+  +  V + +     + RLG+   +             +
Sbjct: 184 KGVTVNTVSPGYIGTDMVKAIRPD--VLEKIVATIPVRRLGSPDEIGSIVAWLASEESGF 241
Query: 240 ITGETLVVAGGM 251
            TG    + GG+
Sbjct: 242 STGADFSLNGGL 253

>pdb|1ZMO|A Chain A, Apo Structure Of Haloalcohol Dehalogenase Hhea Of Arthrobacter Sp. Ad2 Length = 244

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 60/246 (24%), Positives = 100/246 (40%), Gaps = 16/246 (6%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE 73
           +A+VT +    G    E L  +G +VV       +   A E+ +    E  G I     E
Sbjct: 3   IALVTHARHFAGPAAVEALTQDGYTVVC---HDASFADAAERQR-FESENPGTIALA--E 56
Query: 74  QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK---TKESVLDKLWEINVKSSILLMQ 130
           Q  + L+D T++    ID  V N  + P   + L    T E+ + +++E      ILL+Q
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYI-PRPMNRLPLEGTSEADIRQMFEALSIFPILLLQ 115
Query: 131 DAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRVNCV 187
            A   ++   G+SV+FI+S  G +P +   +YG                ++ D   +  +
Sbjct: 116 SAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175
Query: 188 APGFV--PTHFAQALLGNDA-VRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGET 244
            P F   PT+F  +   N+  +R+ ++    L RLG    M              I G+ 
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQF 235
Query: 245 LVVAGG 250
               GG
Sbjct: 236 FAFTGG 241

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 8/242 (3%)
Query: 15  AVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII-CHVSN 72
           A++T +++GIG  +A RL  +G ++ I   + ++  ++  E+ +  G  ++ ++  ++  
Sbjct: 4   ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLE 63
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +    L+ +  E  G +D  V NA +      L++ K+   + + E N+ +     ++A
Sbjct: 64  AEAATALVHQAAEVLGGLDTLVNNAGITRDTL-LVRMKDEDWEAVLEANLSAVFRTTREA 122
Query: 133 APHMQKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRVNCVAP 189
              M K     +V I+S+ G       A Y                E A     VN VAP
Sbjct: 123 VKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAP 182
Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAG 249
           GF+ T   + L     V++A   +    R G    +             YITG+TL V G
Sbjct: 183 GFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240
Query: 250 GM 251
           G+
Sbjct: 241 GL 242

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 30/252 (11%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R Q KV V+T ++QGIG G+          VV +SR  K          +   ++  +  
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------PSADPDIHTVAG 75
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +S  +    ++ + +E++GRID  V NA V   A   ++  +   D    +NV     +
Sbjct: 76  DISKPETADRIVREGIERFGRIDSLVNNAGVF-LAKPFVEXTQEDYDHNLGVNVAGFFHI 134
Query: 129 MQDAAPH-MQKGSS-VVFISSIAGYQP----PSAMAMYGVXXXXXXXXXXXXXXEMA-PD 181
            Q AA   +++GS  +V I++    QP    PSA+A   +              E +   
Sbjct: 135 TQRAAAEXLKQGSGHIVSITTSLVDQPXVGXPSALAS--LTKGGLNAVTRSLAXEFSRSG 192
Query: 182 TRVNCVAPGFV--PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
            RVN V+PG +  P H A+           L G   + R G   ++             +
Sbjct: 193 VRVNAVSPGVIKTPXHPAE-------THSTLAGLHPVGRXGEIRDV--VDAVLYLEHAGF 243
Query: 240 ITGETLVVAGGM 251
           ITGE L V GG 
Sbjct: 244 ITGEILHVDGGQ 255

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII---- 67
           ++ +VT ++ GIG   A      GA+V++  R ++ + +    + +  G +    I    
Sbjct: 11  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 70
Query: 68  -CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
            C   N Q    L  + V  Y R+D  + NA +      + +    V   + +INV ++ 
Sbjct: 71  TCTSENCQQ---LAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQINVNATF 127
Query: 127 LLMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
           +L Q   P + K    S+VF SS  G Q  +    Y                E     RV
Sbjct: 128 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRV 187
Query: 185 NCVAPG 190
           NC+ PG
Sbjct: 188 NCINPG 193

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 88/194 (45%), Gaps = 8/194 (4%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV---IGII 67
           Q  +A++T ++QGIG  +A  L  +G  VV+ +R ++N++K  +++      V   I + 
Sbjct: 6   QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXRSNKHVQEPIVLP 65
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV--KSS 125
             +++       I    +KYG +D+ V NAA       L +  ++   K+ EINV  +  
Sbjct: 66  LDITDCTKADTEIKDIHQKYGAVDILV-NAAAXFXDGSLSEPVDN-FRKIXEINVIAQYG 123
Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
           IL        +QK   +  ++S A     +   +YG               E+AP   RV
Sbjct: 124 ILKTVTEIXKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRV 183
Query: 185 NCVAPGFVPTHFAQ 198
             + PG+V T  A+
Sbjct: 184 TTLCPGWVNTDXAK 197

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 46.6 bits (109), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 97/248 (39%), Gaps = 12/248 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             G+ AVVT +  GIG  +A      GA V+   R    V +  +++   G     ++  
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVAD 87
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI---NVKSSI 126
           +++ +   N+ ++      R+DV V NA +   A      +E  L +  E+   N+ ++ 
Sbjct: 88  LADLEGAANVAEELAATR-RVDVLVNNAGIIARA----PAEEVSLGRWREVLTVNLDAAW 142
Query: 127 LLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTR 183
           +L +     M    S  +V I+S+  +Q    +A Y                E A     
Sbjct: 143 VLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VN +APG+V T    AL  +D     +  +    R  T  +M             Y+ G+
Sbjct: 203 VNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYVHGQ 262
Query: 244 TLVVAGGM 251
            L V GG 
Sbjct: 263 VLAVDGGW 270

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 18/223 (8%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG-----II 67
           K AV+T ST GIGL +A  L   GA++V+      N   A ++++ +  EV G     ++
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVL------NGFGAPDEIRTVTDEVAGLSSGTVL 79
Query: 68  CHVSNEQHRKNLIDKT---VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            H ++      + D      +++G  D+ V NA V  +   +        D++  +N+ S
Sbjct: 80  HHPADXTKPSEIADXXAXVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLSS 138
Query: 125 SILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD- 181
           S   ++ A P  +K     ++ I+S  G       + Y                E+A   
Sbjct: 139 SFHTIRGAIPPXKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAESG 198
Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN 224
             VN + PG+V T   +  + + A  + +  + ++N +   G 
Sbjct: 199 VTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQ 241

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 51/88 (57%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KV ++T  + G G G A R   EGA VVI+ R ++ +++A  +++    +++ +   V N
Sbjct: 7   KVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQXDVRN 66
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVN 100
               +  I++  EK+GRID+ + NAA N
Sbjct: 67  TDDIQKXIEQIDEKFGRIDILINNAAGN 94

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +     G +D+ +LN  +           ++V  K  E+N  S ++L
Sbjct: 90  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 148
Query: 129 MQDAAPH-MQKGSSVVFISSIAG 150
              A P  MQ   S+  +SS+AG
Sbjct: 149 SVAAMPMLMQSQGSIAVVSSVAG 171

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +  K   GKVA+VT + +GIG  +AE    +GA VV       +V+ A E L     +V 
Sbjct: 190 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENLAETASKVG 244
Query: 65  GIICHVSNEQHRKNLIDKTVEKY-----GRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G    +  +    + +DK  E       G+ D+ V NA +      L    ++  D +  
Sbjct: 245 GTALWL--DVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLA 301
Query: 120 INVKSSILLMQDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           +N+ + + L +    +  + +G  V+ +SSIAG         Y                 
Sbjct: 302 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 361
Query: 178 MAPD-TRVNCVAPGFVPTHFAQAL 200
           +A     +N VAPGF+ T    A+
Sbjct: 362 LAAKGITINAVAPGFIETQMTAAI 385

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +  K   GKVA+VT + +GIG  +AE    +GA VV       +V+ A E L     +V 
Sbjct: 214 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENLAETASKVG 268
Query: 65  GIICHVSNEQHRKNLIDKTVEKY-----GRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G    +  +    + +DK  E       G+ D+ V NA +      L    ++  D +  
Sbjct: 269 GTALWL--DVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLA 325
Query: 120 INVKSSILLMQDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           +N+ + + L +    +  + +G  V+ +SSIAG         Y                 
Sbjct: 326 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 385
Query: 178 MAPD-TRVNCVAPGFVPTHFAQAL 200
           +A     +N VAPGF+ T    A+
Sbjct: 386 LAAKGITINAVAPGFIETQMTAAI 409

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +  K   GKVA+VT + +GIG  +AE    +GA VV       +V+ A E L     +V 
Sbjct: 198 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENLAETASKVG 252
Query: 65  GIICHVSNEQHRKNLIDKTVEKY-----GRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G    +  +    + +DK  E       G+ D+ V NA +      L    ++  D +  
Sbjct: 253 GTALWL--DVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLA 309
Query: 120 INVKSSILLMQDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           +N+ + + L +    +  + +G  V+ +SSIAG         Y                 
Sbjct: 310 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 369
Query: 178 MAPD-TRVNCVAPGFVPTHFAQAL 200
           +A     +N VAPGF+ T    A+
Sbjct: 370 LAAKGITINAVAPGFIETQMTAAI 393

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +     G +D+ +LN  +           ++V  K  E+N  S ++L
Sbjct: 67  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNV-RKSMEVNFHSFVVL 125
Query: 129 MQDAAPH-MQKGSSVVFISSIAG 150
              A P  MQ   S+  +SS+AG
Sbjct: 126 SVAAMPMLMQSQGSIAVVSSVAG 148

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +     G +D+ +LN  +           ++V   + E+N  S ++L
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVL 127
Query: 129 MQDAAPH-MQKGSSVVFISSIAG 150
              A P  MQ   S+  +SS+AG
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +  K   GKVA+VT + +GIG  +AE    +GA VV       +V+ A E L     +V 
Sbjct: 227 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENLAETASKVG 281
Query: 65  GIICHVSNEQHRKNLIDKTVEKY-----GRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G    +  +    + +DK  E       G+ D+ V NA +      L    ++  D +  
Sbjct: 282 GTALWL--DVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLA 338
Query: 120 INVKSSILLMQDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           +N+ + + L +    +  + +G  V+ +SSIAG         Y                 
Sbjct: 339 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 398
Query: 178 MAPD-TRVNCVAPGFVPTHFAQAL 200
           +A     +N VAPGF+ T    A+
Sbjct: 399 LAAKGITINAVAPGFIETQMTAAI 422

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 3/143 (2%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC- 68
            QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V +   LG      I  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +    +  + +     G +D+ +LN  +           ++V   + E+N  S ++L
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNRLTFFHGEIDNVRKSM-EVNFHSFVVL 127
Query: 129 MQDAAPH-MQKGSSVVFISSIAG 150
              A P  MQ   S+  +SS+AG
Sbjct: 128 SVAAMPMLMQSQGSIAVVSSVAG 150

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 84/204 (41%), Gaps = 16/204 (7%)
Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +  K   GKVA+VT + +GIG  +AE    +GA VV       +V+ A E L     +V 
Sbjct: 206 DWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVV-----AIDVESAAENLAETASKVG 260
Query: 65  GIICHVSNEQHRKNLIDKTVEKY-----GRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G    +  +    + +DK  E       G+ D+ V NA +      L    ++  D +  
Sbjct: 261 GTALWL--DVTADDAVDKISEHLRDHHGGKADILVNNAGIT-RDKLLANMDDARWDAVLA 317
Query: 120 INVKSSILLMQDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXE 177
           +N+ + + L +    +  + +G  V+ +SSIAG         Y                 
Sbjct: 318 VNLLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGITQALAPG 377
Query: 178 MAPD-TRVNCVAPGFVPTHFAQAL 200
           +A     +N VAPGF+ T    A+
Sbjct: 378 LAAKGITINAVAPGFIETQMTAAI 401

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV----EKLKALGIEVIGIIC 68
           KV +VT ++ G G  +AE     G +V+ ++R+ + +D  V    ++ +A+ ++V     
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDV----- 60
Query: 69  HVSNEQHRKNLIDKTV-EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
               +  R +++   V  +YGR+DV V NA      A   +T E  L  L+E++V     
Sbjct: 61  ---TDGERIDVVAADVLARYGRVDVLVNNAGRTQVGA-FEETTERELRDLFELHVFGPAR 116
Query: 128 LMQDAAPHM-QKGS-SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP-DTRV 184
           L +   P   ++GS SVV ISS  G    +  + Y                E+AP   +V
Sbjct: 117 LTRALLPQXRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKV 176
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTT 222
             V PG     F   L G  A   + E      ++G T
Sbjct: 177 LIVEPG----AFRTNLFGKGAAYFSEENPAYAEKVGPT 210

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 79/201 (39%), Gaps = 34/201 (16%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            Q ++ +VT ++ GIG   A      GA+V++  R +       EKL+        +  H
Sbjct: 12  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNE-------EKLRR-------VAQH 57
Query: 70  VSNEQH-----------------RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES 112
           +++EQH                  + + D+    Y R+D  + NA +      + +    
Sbjct: 58  IADEQHVQPQWFTLDLLTCTAEECRQVADRIAAHYPRLDGVLHNAGLLGEIGPMSEQDPQ 117
Query: 113 VLDKLWEINVKSSILLMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXX 170
           +   + ++NV ++ +L Q   P + K    S+VF SS  G Q  +    Y          
Sbjct: 118 IWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGM 177
Query: 171 XXXXXXEMAPDT-RVNCVAPG 190
                 E    + RVNC+ PG
Sbjct: 178 MQVLADEYQNRSLRVNCINPG 198

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  AERL  +GAS V+        +   +K   LG   +   
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAP 62
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLD---KLWEINV 122
             V++E+  +  +     K+GR+DV V  A  AV     +L K +   L+   ++ ++N+
Sbjct: 63  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 122
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 123 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 182
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQAL 200
             ++AP   RV  +APG   T    +L
Sbjct: 183 ARDLAPIGIRVMTIAPGLFGTPLLTSL 209

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  AERL  +GAS V+        +   +K   LG   +   
Sbjct: 6   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAP 62
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLD---KLWEINV 122
             V++E+  +  +     K+GR+DV V  A  AV     +L K +   L+   ++ ++N+
Sbjct: 63  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 122
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 123 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 182
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQAL 200
             ++AP   RV  +APG   T    +L
Sbjct: 183 ARDLAPIGIRVMTIAPGLFGTPLLTSL 209

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  AERL  +GAS V+        +   +K   LG   +   
Sbjct: 8   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKK---LGNNCVFAP 64
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNA--AVNPYAADLLKTKESVLD---KLWEINV 122
             V++E+  +  +     K+GR+DV V  A  AV     +L K +   L+   ++ ++N+
Sbjct: 65  ADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNL 124
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 125 MGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 184
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQAL 200
             ++AP   RV  +APG   T    +L
Sbjct: 185 ARDLAPIGIRVMTIAPGLFGTPLLTSL 211

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 20/244 (8%)
Query: 16  VVTASTQGIGLGVAERLGLEGASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           +VT    GIG  +       G  V  I   ++++ D A E+              V++  
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHG-----DVADPL 60
Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYA--ADLLKTKESVLDKLWEINVKSSILLMQDA 132
             K  ++  +EK  RIDV V NA        + LL  +    D +  + +K+   L +  
Sbjct: 61  TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEE---FDYILSVGLKAPYELSRLC 117
Query: 133 APHMQKGSS-VVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCVAPGF 191
              + K    ++ I+S   +Q       Y                 + PD  VNC+APG+
Sbjct: 118 RDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGW 177
Query: 192 VPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETLVVAGGM 251
           +     Q     D             ++GT  ++             +ITGET++V GGM
Sbjct: 178 INVTEQQEFTQEDC------AAIPAGKVGTPKDISNMVLFLCQQD--FITGETIIVDGGM 229
Query: 252 ASRL 255
           + R+
Sbjct: 230 SKRM 233

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 101/253 (39%), Gaps = 20/253 (7%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK  ++T   +G+G   A +    GA VV++       ++     + LG         
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLD---EEGAATARELGDAARYQHLD 59
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV--LDKLWEINVKSSIL 127
           V+ E+  + ++    E++G +D  V NA +   +  +    ESV    K+ EIN+    +
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLVNNAGI---STGMFLETESVERFRKVVEINLTGVFI 116
Query: 128 LMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
            M+   P M+   G S+V ISS AG    +  + YG               E+  D  RV
Sbjct: 117 GMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRV 176
Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEG---KTLLNRLGTT-GNMXXXXXXXXXXXXXYI 240
           N V PG   T     +     +R+  EG    T + R+G   G +             Y+
Sbjct: 177 NSVHPGMTYT----PMTAETGIRQG-EGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231
Query: 241 TGETLVVAGGMAS 253
           TG  L V GG  +
Sbjct: 232 TGAELAVDGGWTT 244

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 10  FQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            +GK A++T  A+ + I  G+A+    EGA +  +    K   +  E  K  G +++ + 
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLV-VK 77
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVKS 124
           C VS ++  KNL     E +G +D+ V + A  P   +   ++ T         +I+V S
Sbjct: 78  CDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYS 137
Query: 125 SILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-T 182
            I L ++  P M+ +  ++V +S     +      + G+              ++A    
Sbjct: 138 LIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGH 197
Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG 220
           R+N ++ G V T  A ++ G   +   +E  T +N  G
Sbjct: 198 RINAISAGPVKTLAAYSITGFHLL---MEHTTKVNPFG 232

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 11/186 (5%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII---- 67
           ++ +VT ++ GIG   A      GA+V++  R ++ + +    + +  G +    I    
Sbjct: 13  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 72
Query: 68  -CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
            C   N Q    L  +    Y R+D  + NA +      + +    V   + ++NV ++ 
Sbjct: 73  TCTSENCQQ---LAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATF 129
Query: 127 LLMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRV 184
           +L Q   P + K    S+VF SS  G Q  +    Y                E     RV
Sbjct: 130 MLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRV 189
Query: 185 NCVAPG 190
           NC+ PG
Sbjct: 190 NCINPG 195

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 18/252 (7%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GKV ++TA+ QGIG   A     EGA V+ +   +  + + +EK   +   V+ +  
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKL-QELEKYPGIQTRVLDVT- 60
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
                  +K  ID+   +  R+DV + N A   +   +L  +E   D    +NV+S  L+
Sbjct: 61  -------KKKQIDQFANEVERLDV-LFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112
Query: 129 MQDAAPHM--QKGSSVVFISSIAG-YQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TRV 184
           ++   P M  QK  +++ +SS+A   +      +Y                +      R 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172
Query: 185 NCVAPGFVPTHFAQALL---GN-DAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYI 240
           NCV PG V T   Q  +   GN +  R     +    R  T   +             Y+
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232
Query: 241 TGETLVVAGGMA 252
           TG  +++ GG +
Sbjct: 233 TGNPVIIDGGWS 244

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 44.3 bits (103), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 97/247 (39%), Gaps = 6/247 (2%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
           R  GK A++T +T+GIG  +A      GA +V+S R    +D A   L +  G +V  + 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             ++       L  +  E +G +DV V NA ++ +   ++ T   + D    +N+++  L
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGIS-HPQPVVDTDPQLFDATIAVNLRAPAL 135
Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPD-TR 183
           L       M    +G +++ ++S A   P      Y                E+ P   R
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
            N V P  V T   Q + G++A    +  +  L R      +              I G 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255
Query: 244 TLVVAGG 250
            + V GG
Sbjct: 256 DIPVDGG 262

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 5/183 (2%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHV- 70
           ++ +VT ++ GIG   A      GA+V++  R ++ + +    + +  G +    I  + 
Sbjct: 15  RIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLL 74
Query: 71  -SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
               +  + L  +    Y R+D  + NA +      + +    V   + ++NV ++ +L 
Sbjct: 75  TCTSEDCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQDPQVWQDVMQVNVNATFMLT 134
Query: 130 QDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVNCV 187
           Q   P + K    S+VF SS  G Q  +    Y                E     RVNC+
Sbjct: 135 QALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQRLRVNCI 194
Query: 188 APG 190
            PG
Sbjct: 195 NPG 197

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 20/228 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  A+RL  +GA+ V+        +   +K   LG   I   
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKK---LGGNCIFAP 62
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV-----LDKLWEINV 122
            +V++E+  +  +    EK+GRIDV V  A +        + K  V       ++  +N+
Sbjct: 63  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 122
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 123 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 182
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLG 220
             ++AP   RV  +APG   T     L   D VR  L  +    +RLG
Sbjct: 183 ARDLAPIGIRVVTIAPGLFATPLLTTL--PDTVRNFLASQVPFPSRLG 228

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 27/169 (15%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS---------RKQKNVDKAVEKLKAL 59
           RF G+V +VT +  G+G   A      GA VV++          +     DK VE+++  
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSLAADKVVEEIRRR 86
Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE--SVLDKL 117
           G +    + +  + +  + ++   ++ +GRIDV V NA +       L+ +    + D+ 
Sbjct: 87  GGKA---VANYDSVEEGEKVVKTALDAFGRIDVVVNNAGI-------LRDRSFARISDED 136
Query: 118 WEI----NVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMY 160
           W+I    +++ S  + + A  HM  QK   ++  SS +G       A Y
Sbjct: 137 WDIIHRVHLRGSFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANY 185

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 18/191 (9%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC---H 69
           K+ V+T ++ GIG  +A R   EG  +++ +R+       VE+LKAL +     +C    
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARR-------VERLKALNLP--NTLCAQVD 67
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES-VLDKLWEINVKSSILL 128
           V+++      I +  + YG  D  V NA +       + T+E+    +++++NV   +  
Sbjct: 68  VTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQ--IDTQEANEWQRMFDVNVLGLLNG 125
Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQP-PSAMAMYGVXXXXXXXXXXXXXXEMAPDTRVN 185
           MQ     M  +   +++ ISSIAG +  P   A  G                 A + RV 
Sbjct: 126 MQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVM 185
Query: 186 CVAPGFVPTHF 196
            +AP  V T  
Sbjct: 186 TIAPSAVKTEL 196

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 7/197 (3%)
Query: 16  VVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH 75
            +T +T G G   A R    G S+V++ R+++ +     +L A    V+ +   V +   
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-KTRVLPLTLDVRDRAA 83
Query: 76  RKNLIDKTVEKYGRIDVFVLNAAV----NPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
               +D   E++  +   + NA +    +P  +  L   ++ +D   +  + S+ LL+  
Sbjct: 84  XSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTXVDTNIKGLLYSTRLLLPR 143
Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEM-APDTRVNCVAPG 190
              H   G+S+V + S+AG  P     +YG               ++     RV  + PG
Sbjct: 144 LIAH-GAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPG 202
Query: 191 FVPTHFAQALLGNDAVR 207
              + F+    G D  R
Sbjct: 203 LCESEFSLVRFGGDQAR 219

>pdb|2HRB|A Chain A, Crystal Structure Of Human Carbonyl Reductase 3, Complexed With Nadp+ Length = 274

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 10/141 (7%)
Query: 13  KVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           +VA+VT + +GIGL +A  L  +    VV+++R       AV++L+A G+        + 
Sbjct: 3   RVALVTGANRGIGLAIARELCRQFSGDVVLTARDVARGQAAVQQLQAEGLSPRFHQLDID 62
Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL---- 127
           + Q  + L D   ++YG ++V V NAAV   + D +       D   E+ +K++      
Sbjct: 63  DLQSIRALRDFLRKEYGGLNVLVNNAAVAFKSDDPMP-----FDIKAEMTLKTNFFATRN 117
Query: 128 LMQDAAPHMQKGSSVVFISSI 148
           +  +  P M+    VV ISS+
Sbjct: 118 MCNELLPIMKPHGRVVNISSL 138

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 76/200 (38%), Gaps = 24/200 (12%)
Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS----------SRKQKNVDKAVEKLKALG 60
            G+V +VT +  GIG   A     EGA VV++          +         V+++ A G
Sbjct: 26  DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG 85
Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLW 118
            E +    +V++      LI   VE +G +DV V NA +     D  +  T E   D + 
Sbjct: 86  GEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGI---VRDRMIANTSEEEFDAVI 142
Query: 119 EINVKSSILLMQDAAPHMQKGSS--------VVFISSIAGYQPPSAMAMYGVXXXXXXXX 170
            +++K     M+ AA + +  S         ++  SS AG Q       Y          
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202
Query: 171 XXXXXXEMAP-DTRVNCVAP 189
                 EM      VN +AP
Sbjct: 203 TLVGAAEMGRYGVTVNAIAP 222

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 20/228 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  A+RL  +GA+ V+        +   +K   LG   I   
Sbjct: 6   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKK---LGGNCIFAP 62
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV-----LDKLWEINV 122
            +V++E+  +  +    EK+GRIDV V  A +        + K  V       ++  +N+
Sbjct: 63  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 122
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 123 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 182
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLG 220
             ++AP   RV  +APG   T     L   D VR  L  +    +RLG
Sbjct: 183 ARDLAPIGIRVVTIAPGLFATPLLTTL--PDKVRNFLASQVPFPSRLG 228

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 20/228 (8%)
Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  A+RL  +GA+ V+        +   +K   LG   I   
Sbjct: 5   RSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLLDVPNSEGETEAKK---LGGNCIFAP 61
Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESV-----LDKLWEINV 122
            +V++E+  +  +    EK+GRIDV V  A +        + K  V       ++  +N+
Sbjct: 62  ANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLEDFQRVINVNL 121
Query: 123 KSSILLMQDAAPHM------QKGSSVVFI--SSIAGYQPPSAMAMYGVXXXXXXXXXXXX 174
             +  +++  A  M      Q G   V I  +S+A ++     A Y              
Sbjct: 122 IGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPI 181
Query: 175 XXEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLG 220
             ++AP   RV  +APG   T     L   D VR  L  +    +RLG
Sbjct: 182 ARDLAPIGIRVVTIAPGLFATPLLTTL--PDKVRNFLASQVPFPSRLG 227

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 91/245 (37%), Gaps = 9/245 (3%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           V +VT  ++GIG  V      +G  V ++ +  ++  D  V  +   G E + I   V N
Sbjct: 28  VVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGN 87
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                        ++GR+D  V NA +  Y   + +     +++   +NV  SIL   +A
Sbjct: 88  AADIAAXFSAVDRQFGRLDGLVNNAGIVDYPQRVDEXSVERIERXLRVNVTGSILCAAEA 147
Query: 133 APHMQK-----GSSVVFISSIAGYQPPSAMAM-YGVXXXXXXXXXXXXXXEMAPD-TRVN 185
                +     G ++V +SS A     +   + Y                E+A +  RVN
Sbjct: 148 VRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEGIRVN 207
Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGETL 245
            V PG + T    +    D  R+         R G    +             Y+TG  L
Sbjct: 208 AVRPGIIETDLHASGGLPDRAREXAP-SVPXQRAGXPEEVADAILYLLSPSASYVTGSIL 266
Query: 246 VVAGG 250
            V+GG
Sbjct: 267 NVSGG 271

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 103/251 (41%), Gaps = 15/251 (5%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIIC 68
           FQGKVA +T    G+G G    L   GA  VI+SRK   +    E++ +  G +V  I C
Sbjct: 24  FQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTGNKVHAIQC 83
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +    +N + + ++  G  ++ + NAA N + +   +   +    + +I +  +  +
Sbjct: 84  DVRDPDXVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142
Query: 129 MQDAAPHM---QKGSSVVFISSI-----AGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
             +    +   QKG++ + I++I     +G+  PSA A  GV                  
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWGKY---- 198
Query: 181 DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXY 239
             R N + PG + T  A + L       K   G+    RLGT   +             +
Sbjct: 199 GXRFNVIQPGPIKTKGAFSRLDPTGTFEKEXIGRIPCGRLGTVEELANLAAFLCSDYASW 258
Query: 240 ITGETLVVAGG 250
           I G  +   GG
Sbjct: 259 INGAVIKFDGG 269

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 25/159 (15%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---------------SSRKQKNVDKAV 53
           R Q KV +VT   +G G   A +L  EGA +++               +SR  +     V
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 54  EKL--KALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE 111
           EK   KA   EV      V +       +   V ++G++DV V NA + P  A L     
Sbjct: 67  EKTGRKAYTAEV-----DVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL---PV 118
Query: 112 SVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG 150
                 ++++    I  +  A P++  G+S++   S+AG
Sbjct: 119 QAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG 157

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 41.6 bits (96), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 27/230 (11%)
Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M   F G  A+VT + +GIG    + L   GA VV  +R   +       L +L  E  G
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSD-------LVSLAKECPG 53
Query: 66  I--ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           I  +C    +    +  +K +   G +D+ V NAA+      L  TKE+  D+ + +N++
Sbjct: 54  IEPVCV---DLGDWDATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEA-FDRSFSVNLR 109
Query: 124 SSILLMQDAAPHM-QKG--SSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAP 180
           S   + Q  A  M  +G   S+V +SS+  +     +  Y                E+ P
Sbjct: 110 SVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGP 169
Query: 181 -DTRVNCVAPGFVPT----------HFAQALLGNDAVRKALEGKTLLNRL 219
              RVN V P  V T           FA+ L     +RK  E + ++N +
Sbjct: 170 HKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSI 219

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 41.2 bits (95), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/247 (21%), Positives = 89/247 (36%), Gaps = 9/247 (3%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  G  A VT +  GIGL +       GA +++  R+   +D+A ++   LG  V   I 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQE---LGAAVAARIV 64
Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
               +           E    + + V N+A      D L+T ++   ++  +NV      
Sbjct: 65  ADVTDAEAMTAAAAEAEAVAPVSILV-NSAGIARLHDALETDDATWRQVMAVNVDGMFWA 123
Query: 129 MQDAAPHM--QKGSSVVFISSIAG--YQPPSAMAMYGVXXXXXXXXXXXXXXEMA-PDTR 183
            +     M  +   ++V + S++G     P   + Y                E A    R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183
Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMXXXXXXXXXXXXXYITGE 243
           VN +APG+V T     +     + +     T + R G    +             Y+TG 
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGA 243
Query: 244 TLVVAGG 250
            L V GG
Sbjct: 244 ILAVDGG 250

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 40.8 bits (94), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 8/183 (4%)
Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            + KV ++T +  G+G   A+     GA VV++  K  +  K V+++KA G E       
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAGGEAWPDQHD 377
Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+ +     +I   ++KYG ID+ V NA +        K  +   D + ++++  +  L 
Sbjct: 378 VAKDSEA--IIKNVIDKYGTIDILVNNAGI-LRDRSFAKMSKQEWDSVQQVHLIGTFNLS 434
Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVXXXXXXXXXXXXXXEMAPDT-RVNC 186
           + A P+   ++   ++ I+S +G       A Y                E A +  +VN 
Sbjct: 435 RLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNI 494
Query: 187 VAP 189
           VAP
Sbjct: 495 VAP 497

>pdb|3O26|A Chain A, The Structure Of Salutaridine Reductase From Papaver Somniferum Length = 311

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 6/107 (5%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH--- 69
           + AVVT   +GIG  + ++L   G  VV++ R      +AVEKLK    E   ++ H   
Sbjct: 13  RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHE--NVVFHQLD 70
Query: 70  VSNE-QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
           V++      +L D     +G++D+ V NA V  ++ D  + K  + D
Sbjct: 71  VTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISD 117

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           K+A+VT +  G+G  VA  L   G  V ++ R+   +D   E    +G + + +   V++
Sbjct: 29  KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRR---LDALQETAAEIGDDALCVPTDVTD 85
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
               + L   TVEK+GR+DV   NA     A        +   ++ + N+    L  Q+A
Sbjct: 86  PDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPXEDLTFAQWKQVVDTNLTGPFLCTQEA 145
Query: 133 ----APHMQKGSSVVFISSIAGYQPPSAMAMY 160
                    +G  ++   SI+   P    A Y
Sbjct: 146 FRVXKAQEPRGGRIINNGSISATSPRPYSAPY 177

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 40.4 bits (93), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           VA+VT   +GIGLG+A  L   G  + I+     + V   + +L  LG  VI +   +++
Sbjct: 31  VAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLAD 90
Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLMQ 130
               +  +D  V ++GRID  V NA +      D L  K    D +  +N++ ++   Q
Sbjct: 91  LSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQ 149

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 102/272 (37%), Gaps = 35/272 (12%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV--IGI 66
             +   AVVT + + IG  +A +L   G  VVI      + + AV     L  E     +
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAV 77
Query: 67  ICH--VSNEQ----HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL----------KTK 110
           +C   ++N        + +I+     +GR DV V NA+   Y   L+          KT 
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF-YPTPLVQGDHEDNSNGKTV 136
Query: 111 ESVLDKLWEINVKSSILLMQDAAPHMQKGS---------SVVFISSIAGYQPPSAMAMYG 161
           E+ + +L   N  +  LL    A   QKG+         S+V +      QP  A ++Y 
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFA-QRQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYN 195
Query: 162 VXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG 220
           +              E+AP   RVN VAPG      A      D  R+ +    L  R  
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV---PLGRREA 252
Query: 221 TTGNMXXXXXXXXXXXXXYITGETLVVAGGMA 252
           +   +             YITG  + V GG++
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 40.4 bits (93), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 102/272 (37%), Gaps = 35/272 (12%)
Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV--IGI 66
             +   AVVT + + IG  +A +L   G  VVI      + + AV     L  E     +
Sbjct: 20  HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVI--HYHNSAEAAVSLADELNKERSNTAV 77
Query: 67  ICH--VSNEQ----HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL----------KTK 110
           +C   ++N        + +I+     +GR DV V NA+   Y   L+          KT 
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAF-YPTPLVQGDHEDNSNGKTV 136
Query: 111 ESVLDKLWEINVKSSILLMQDAAPHMQKGS---------SVVFISSIAGYQPPSAMAMYG 161
           E+ + +L   N  +  LL    A   QKG+         S+V +      QP  A ++Y 
Sbjct: 137 ETQVAELIGTNAIAPFLLTMSFA-QRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYN 195
Query: 162 VXXXXXXXXXXXXXXEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG 220
           +              E+AP   RVN VAPG      A      D  R+ +    L  R  
Sbjct: 196 MGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAMGEEEKDKWRRKV---PLGRREA 252
Query: 221 TTGNMXXXXXXXXXXXXXYITGETLVVAGGMA 252
           +   +             YITG  + V GG++
Sbjct: 253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	255
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-115
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	2e-84
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	2e-84
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	5e-84
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	5e-80
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-79
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	3e-78
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	4e-76
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	3e-75
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	2e-74
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	2e-74
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	4e-74
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	6e-74
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	1e-73
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	3e-73
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	4e-73
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	5e-73
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	2e-72
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	2e-72
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	3e-72
1xhl_A	297	Short-chain dehydrogenase/reductase family member	4e-72
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	5e-72
1spx_A	278	Short-chain reductase family member (5L265); paral	6e-72
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-71
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-71
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-71
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-71
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	7e-71
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	1e-70
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	1e-70
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-70
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	2e-70
1xkq_A	280	Short-chain reductase family member (5D234); parra	4e-70
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	6e-70
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	1e-69
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-69
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	3e-69
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	7e-69
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	8e-69
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-68
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	2e-68
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	3e-68
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	3e-68
4e4y_A	244	Short chain dehydrogenase family protein; structur	4e-68
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	6e-68
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	7e-68
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	7e-68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-67
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-67
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	3e-67
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-67
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	5e-67
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	6e-67
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	6e-67
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	9e-67
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	1e-66
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	1e-66
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-66
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	5e-66
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	5e-66
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	6e-66
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	8e-66
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	9e-66
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-65
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-65
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-65
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-65
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	2e-65
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	2e-65
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-65
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	4e-65
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	1e-64
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	2e-64
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-64
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	2e-64
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	8e-64
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	3e-63
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-63
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	8e-63
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	8e-63
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-62
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	1e-62
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-62
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	4e-62
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	7e-62
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-61
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	6e-61
3rih_A	293	Short chain dehydrogenase or reductase; structural	2e-60
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	3e-60
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	4e-60
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	5e-60
3cxt_A	291	Dehydrogenase with different specificities; rossma	7e-60
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-59
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	4e-59
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	4e-59
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	4e-59
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	5e-59
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	5e-59
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	6e-59
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	7e-59
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	7e-59
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	1e-58
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	1e-58
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-58
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	2e-58
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	4e-58
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	4e-58
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	2e-57
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-57
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	3e-57
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	3e-57
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-57
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	4e-57
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	7e-57
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	1e-56
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	2e-56
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-56
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	2e-56
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	4e-56
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	4e-56
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-55
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-55
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	2e-55
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-55
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	5e-55
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	5e-54
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	6e-54
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	6e-54
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	7e-54
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	1e-53
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	2e-53
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	2e-53
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	3e-53
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	6e-53
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	6e-53
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	8e-53
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	1e-52
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	3e-52
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	3e-52
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	8e-52
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	9e-52
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	2e-51
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	5e-51
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	8e-51
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-50
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	3e-50
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-48
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-48
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	5e-47
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	2e-46
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	2e-45
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	4e-43
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	4e-42
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	2e-39
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-39
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	5e-38
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	5e-38
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	7e-38
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	8e-37
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	6e-36
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	1e-34
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	1e-34
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-34
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-30
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	6e-34
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-33
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-33
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	3e-32
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	7e-32
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	9e-32
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	5e-31
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	4e-30
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	9e-30
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	1e-29
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-28
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	8e-28
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	9e-27
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	6e-26
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	8e-26
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	1e-25
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	4e-25
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	2e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	6e-24
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-24
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	2e-23
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	2e-22
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	2e-22
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	3e-22
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	4e-22
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	5e-22
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	1e-21
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-20
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	4e-20
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	2e-17
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	2e-17
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	7e-16
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	2e-13
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	6e-10
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	2e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	1e-07
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-04
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	2e-04

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  329 bits (846), Expect = e-115
 Identities = 118/260 (45%), Positives = 168/260 (64%), Gaps = 5/260 (1%)

Query: 1   MEKVNMA--KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M    +   K  + KVA+VTAST GIGL +A RL  +GA VV+SSRKQ+NVD+ V  L+ 
Sbjct: 1   MASTGVERRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQG 60

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G+ V G +CHV   + R+ L+   V  +G +D+ V NAAVNP+  +++   E V DK+ 
Sbjct: 61  EGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKIL 120

Query: 119 EINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
            +NVK+++L+ +   P M  + G SV+ +SS+  Y P   +  Y V+KTALLGLTK LA 
Sbjct: 121 HVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAV 180

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E+AP   RVNC+APG + T+F+Q L  + A ++ ++    + RLG   + A  ++FL S+
Sbjct: 181 ELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSE 240

Query: 236 DASYITGETLVVAGGMASRL 255
           DASYITGET+VV GG ASRL
Sbjct: 241 DASYITGETVVVGGGTASRL 260

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  252 bits (647), Expect = 2e-84
 Identities = 77/256 (30%), Positives = 117/256 (45%), Gaps = 6/256 (2%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---I 61
           +M   FQ +  +VT    GIG GVA  L   GASV+I  R    +  AV++L+ALG    
Sbjct: 4   SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGG 63

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
            +      ++NE      +D     +GR+   V  A  +     + +       +  ++N
Sbjct: 64  AIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLN 123

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           V  ++ +++ AA  M    G S V ISSIA          YGVTK+A+  L +  A E+ 
Sbjct: 124 VNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELG 183

Query: 180 PDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
               RVN + PG + T    A+  +  +       T L R G   ++A    FL SD AS
Sbjct: 184 ASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS 243

Query: 239 YITGETLVVAGGMASR 254
           ++TG+ + V GG   R
Sbjct: 244 FVTGQVINVDGGQMLR 259

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  252 bits (645), Expect = 2e-84
 Identities = 79/261 (30%), Positives = 130/261 (49%), Gaps = 11/261 (4%)

Query: 1   MEKVNMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M   N   R+  +G  A+VT  ++GIG  + E L   GA V   SR +K +D+ +E  + 
Sbjct: 8   MMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE 67

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
            G+ V G +C + +   R  L+      + G++++ V NA V  +  +     E   + +
Sbjct: 68  KGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH-KEAKDFTEKDYNII 126

Query: 118 WEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
              N +++  L Q A P +   +  +V+F+SSIAG+    ++++Y  +K A+  +TK+LA
Sbjct: 127 MGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLA 186

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAQALLGND----AVRKALEGKTLLNRLGTTGNMAAAIA 230
            E A D  RVN VAPG + T   +  +  +            KT + R G    ++A IA
Sbjct: 187 CEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIA 246

Query: 231 FLASDDASYITGETLVVAGGM 251
           FL    ASYITG+ +   GG 
Sbjct: 247 FLCFPAASYITGQIIWADGGF 267

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  250 bits (642), Expect = 5e-84
 Identities = 66/258 (25%), Positives = 126/258 (48%), Gaps = 11/258 (4%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M      KV V++     +G  +A R   +GA +V+++R  + ++   +++   G   +
Sbjct: 4   SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRAL 63

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   ++++    +L+D+T++ YGR+DV + NA   P       T    +    E+ V  
Sbjct: 64  SVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFG 123

Query: 125 SILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
           ++ L+Q   P +++   +VV ++S+      +    Y + K+ALL +++ LA E+     
Sbjct: 124 ALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183

Query: 183 RVNCVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           RVN V PG++     ++   +         + +  A    + L RL T   +A+AI F+A
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA 243

Query: 234 SDDASYITGETLVVAGGM 251
           SD AS ITG+ L V  G 
Sbjct: 244 SDLASGITGQALDVNCGE 261

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  248 bits (636), Expect = 3e-83
 Identities = 81/255 (31%), Positives = 133/255 (52%), Gaps = 10/255 (3%)

Query: 6   MAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           MA R+  +G  A+VT  ++GIG G+ E L   GASV   SR QK ++  + + ++ G +V
Sbjct: 1   MAGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKV 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
              +C +S+   R+ L++     + G++++ V NA +  Y  +           +  IN 
Sbjct: 61  EASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINF 119

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +++  L   A P +   +  +VVFISS++G       A+YG TK A+  LT+ LA E A 
Sbjct: 120 EAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAK 179

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALE---GKTLLNRLGTTGNMAAAIAFLASDD 236
           D  RVN V PG + T   +  + +   ++ L     +  L R+G    +AA +AFL    
Sbjct: 180 DNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPA 239

Query: 237 ASYITGETLVVAGGM 251
           ASY+TG+ + V GG+
Sbjct: 240 ASYVTGQIIYVDGGL 254

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  240 bits (616), Expect = 5e-80
 Identities = 85/258 (32%), Positives = 127/258 (49%), Gaps = 10/258 (3%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           +   +M +R   K+AV+T +T GIGL  A+R   EGA V I+ R++  +D A+     +G
Sbjct: 18  LYFQSMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAI---AEIG 74

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
              +GI    +N      L +K   + GRIDV  +NA        L +  E   D  ++ 
Sbjct: 75  GGAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSML-PLGEVTEEQYDDTFDR 133

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           NVK  +  +Q A P + +GSSVV   S AG     A ++Y  +K AL    +    ++  
Sbjct: 134 NVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKD 193

Query: 181 DT-RVNCVAPGFVPTHFAQALLGND-----AVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
              R+N ++PG   T     L G D      +  AL  +  + R+G    +AAA  FLAS
Sbjct: 194 RGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLAS 253

Query: 235 DDASYITGETLVVAGGMA 252
           DD+S++TG  L V GG A
Sbjct: 254 DDSSFVTGAELFVDGGSA 271

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  239 bits (612), Expect = 2e-79
 Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 8/258 (3%)

Query: 1   MEKVNMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
           M     ++R+  + K  +VT  T+GIG  + E     GA +   +R +  +++ + K + 
Sbjct: 1   MAGAEQSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK 60

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYG-RIDVFVLNAAVNPYAADLLKTKESVLDKL 117
            G +V G +C  S    R+ L+      +G ++D+ + N          L          
Sbjct: 61  KGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS-KPTLDYTAEDFSFH 119

Query: 118 WEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
              N++S+  L Q A P +      +++F+SSIAG    S  ++Y  TK AL  L + LA
Sbjct: 120 ISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLA 179

Query: 176 AEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
            E A D  R N VAP  + T  A+A+  +D  +K +  +  L R G    +++ +AFL  
Sbjct: 180 CEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCM 238

Query: 235 DDASYITGETLVVAGGMA 252
             ASYITG+T+ V GG+ 
Sbjct: 239 PAASYITGQTICVDGGLT 256

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  235 bits (603), Expect = 3e-78
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +++EQ    L D  + K G++D+ V NA              +   + +E+NV S   L
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYELNVFSFFHL 125

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q  AP M    G  ++ I+S+A       M  Y  +K A   L + +A ++     RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +APG + T   ++++    + + +   T + RLG   ++A A  FL S  AS+++G+ L
Sbjct: 186 GIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244

Query: 246 VVAGGMASRL 255
            V+GG    L
Sbjct: 245 TVSGGGVQEL 254

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  235 bits (603), Expect = 4e-78
 Identities = 71/260 (27%), Positives = 118/260 (45%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVI 64
           M     GKVAV+T S+ GIGL +AE    EGA +V+ +R+   + +A   LK   G+ V+
Sbjct: 1   MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVL 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   V+  +    +++     +G  D+ V NA        +++  +      WE+ V +
Sbjct: 61  EVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMA 119

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           ++ L +   P M  + G +++  +SI   QP     +Y VTK AL+  +K LA E+  D 
Sbjct: 120 AVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDN 179

Query: 183 -RVNCVAPGFVPTHFAQALLG----------NDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
            RVNC+ PG + T                     ++   +    + R  +   +A    F
Sbjct: 180 IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVF 239

Query: 232 LASDDASYITGETLVVAGGM 251
           L S+ A+Y  G    V GGM
Sbjct: 240 LCSERATYSVGSAYFVDGGM 259

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  230 bits (589), Expect = 4e-76
 Identities = 73/248 (29%), Positives = 112/248 (45%), Gaps = 5/248 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R   +VA+VT   Q IGL     L   GA V+I+   +    KAVE L+  G +V  ++ 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVM 69

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+N +  +N +    E+ GR+D+ V  A +           +    K  +IN+      
Sbjct: 70  DVTNTESVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRS 129

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            Q     M  QK   +V I S++G     P   A Y  +K  +    ++LAAE AP   R
Sbjct: 130 CQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIR 189

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            N VAP ++ T   +  +    +  A    T + R+G    +A+ + FLASD AS +TG 
Sbjct: 190 ANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTGA 249

Query: 244 TLVVAGGM 251
            + V  G 
Sbjct: 250 IVNVDAGF 257

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  228 bits (583), Expect = 3e-75
 Identities = 83/250 (33%), Positives = 132/250 (52%), Gaps = 6/250 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
                VA+VT +  GIG  +A      GASVV++  K +  +     ++  G + IG+ C
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +V++EQHR+ +I   ++++G+I V V NA              S  +  +++N+ S   L
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAGGGG--PKPFDMPMSDFEWAFKLNLFSLFRL 126

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q AAPHM    G +++ ISS+AG      MA YG +K A+  LT+ +A ++ P   RVN
Sbjct: 127 SQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVN 186

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +APG + T     +L    + +A+   T L RLG   ++A A  FL S  A++I+G+ L
Sbjct: 187 AIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVL 245

Query: 246 VVAGGMASRL 255
            V+GG    L
Sbjct: 246 TVSGGGVQEL 255

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  226 bits (579), Expect = 2e-74
 Identities = 70/248 (28%), Positives = 109/248 (43%), Gaps = 7/248 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +GKVA VT S+ GIG  VAE     GA V I        +KA    K  G+      C
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC 90

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSIL 127
           ++S+ +  +  I +  + +G IDVFV NA V      ++        +K+  +++     
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
              +           S++  SSI+G     P   A Y   K A   L K+LA E AP  R
Sbjct: 151 CSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFAR 210

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN ++PG++ T        +  ++      T L R G T  +     +LAS+ +++ TG 
Sbjct: 211 VNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTTGS 268

Query: 244 TLVVAGGM 251
            +V+ GG 
Sbjct: 269 DVVIDGGY 276

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  226 bits (578), Expect = 2e-74
 Identities = 73/252 (28%), Positives = 126/252 (50%), Gaps = 6/252 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R ++   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   V+ E    NL+   ++++G++DV + NA +        +   S  +K+ + N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTG 119

Query: 125 SILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           + L  ++A  +  +     +V+ +SS+    P      Y  +K  +  +T+ LA E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 182 T-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN + PG + T        +   R  +E    +  +G    +AA  A+LAS +ASY+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239

Query: 241 TGETLVVAGGMA 252
           TG TL   GGM 
Sbjct: 240 TGITLFADGGMT 251

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  225 bits (576), Expect = 4e-74
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 10/255 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           +   +QGK A+V   T G+GL    RL   GA V+++ R + N+ +  E     G  V  
Sbjct: 2   VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIRE---EFGPRVHA 58

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   +++      L     +  G ID+  +NA V+       +  E+  D+ + +N K +
Sbjct: 59  LRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEP-FDQVSEASYDRQFAVNTKGA 117

Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
              +Q   P +++G S+VF SS+A       M++Y  +K AL+     LAAE+ P   RV
Sbjct: 118 FFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRV 177

Query: 185 NCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           N V+PGF+ T                +   +  T + R GT   +A A+ FLA  +A++ 
Sbjct: 178 NSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAF-EATFT 236

Query: 241 TGETLVVAGGMASRL 255
           TG  L V GG+  +L
Sbjct: 237 TGAKLAVDGGLGQKL 251

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  225 bits (575), Expect = 6e-74
 Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 5/249 (2%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  + KV +VT +  GIG  +A++  L  + VV     +  +++ V++L+ +G EV+G+ 
Sbjct: 3   QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS ++  +  + +T E Y RIDV   NA +      + +  + + +++  +N+ S+  
Sbjct: 63  ADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             +   P M  Q    +V  +SIAG +   A A Y V K  L+GLT+++AA       R 
Sbjct: 123 SSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182

Query: 185 NCVAPGFVPTHFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
             V PG V T+            +R   +  +L +RL    ++A  I FLASD+AS++ G
Sbjct: 183 VAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG 242

Query: 243 ETLVVAGGM 251
           + +VV GG+
Sbjct: 243 DAVVVDGGL 251

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  224 bits (573), Expect = 1e-73
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 5/247 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            Q K A+VT S++G+G   A RL   G ++VI+ +R +K   +  E+++ LG++V+ +  
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKA 61

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +V      K +  +  E +GR+DVFV NAA       +++ +E+  D    IN K+ +  
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVLRP-VMELEETHWDWTMNINAKALLFC 120

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q+AA  M    G  +V ISS+   +        GV+K AL  LT+ LA E++P    VN
Sbjct: 121 AQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN 180

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            V+ G + T   +     + + +     T   R+    +M   + FL S  A  I G+T+
Sbjct: 181 AVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTI 240

Query: 246 VVAGGMA 252
           +V GG +
Sbjct: 241 IVDGGRS 247

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  224 bits (572), Expect = 3e-73
 Identities = 70/260 (26%), Positives = 119/260 (45%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           +  G+VA++T    G+G  + +R   EGA V +  +  + + +      A G   +G++ 
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEV---AHGGNAVGVVG 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----INVKS 124
            V + Q +K   ++ +  +G+ID  + NA +  Y+  L    E  +D  ++    +NVK 
Sbjct: 59  DVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKG 118

Query: 125 SILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P +     SVVF  S AG+ P     +Y  TK A++GL + +A E+AP  R
Sbjct: 119 YIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPHVR 178

Query: 184 VNCVAPGFVPT--------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           VN VAPG + T          ++  + +  +   L+    + R+        A  F A+ 
Sbjct: 179 VNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATR 238

Query: 236 DAS-YITGETLVVAGGMASR 254
             S   TG  L   GGM  R
Sbjct: 239 GDSLPATGALLNYDGGMGVR 258

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  223 bits (570), Expect = 4e-73
 Identities = 70/249 (28%), Positives = 113/249 (45%), Gaps = 6/249 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
           R  GK A++T +T+GIG  +A      GA +V+S R    +D A   L +  G +V  + 
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             ++       L  +  E +G +DV V NA ++     ++ T   + D    +N+++  L
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPAL 135

Query: 128 LMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           L       M     G +++ ++S A   P      Y  +K  L+  TK LA E+ P   R
Sbjct: 136 LASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIR 195

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            N V P  V T   Q + G++A    +  +  L R      ++ A+ +LASD AS I G 
Sbjct: 196 ANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMINGV 255

Query: 244 TLVVAGGMA 252
            + V GG  
Sbjct: 256 DIPVDGGYT 264

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  222 bits (569), Expect = 5e-73
 Identities = 74/262 (28%), Positives = 126/262 (48%), Gaps = 17/262 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M+K+F GKV +VT +   IGL  A RL  EG ++ +    ++ ++KA   ++  G+E   
Sbjct: 1   MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARS 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
            +C V++E+     +D  V  +G+ID    NA      A +         ++  INV  +
Sbjct: 61  YVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
             +++  +  M  Q    +V  +S+AG + P  MA YG +K A++ LT+  A ++AP   
Sbjct: 121 FHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 180

Query: 183 RVNCVAPGFVPTHFAQALLGN--------------DAVRKALEGKTLLNRLGTTGNMAAA 228
           RVN ++PG++   F                       V + + G   + R G    +   
Sbjct: 181 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV 240

Query: 229 IAFLASDDASYITGETLVVAGG 250
           +AFL  DD+S++TG  L +AGG
Sbjct: 241 VAFLLGDDSSFMTGVNLPIAGG 262

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  221 bits (565), Expect = 2e-72
 Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 12/252 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +GKVA++T +  G G G+A+R    GA VVI  R +   ++       +G   + +  
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAG---EIGDAALAVAA 62

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +S E      ++  + K+G++D+ V NA +     +    +    D++  +NV+   L+
Sbjct: 63  DISKEADVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 129 MQDAAPHMQK------GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
                PH ++         ++ ++S    +P   +A Y  TK  ++ +TKALA E+AP  
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAK 182

Query: 183 -RVNCVAPGFVPTHFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            RV  + P    T      +G D   +RK       + RL    ++A A AFL S  AS 
Sbjct: 183 IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQASM 242

Query: 240 ITGETLVVAGGM 251
           ITG  L V GG 
Sbjct: 243 ITGVALDVDGGR 254

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  221 bits (566), Expect = 2e-72
 Identities = 72/261 (27%), Positives = 117/261 (44%), Gaps = 12/261 (4%)

Query: 1   MEKVNMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA 58
               +M   F   G++A+VT  ++GIG  +A+ L   GA V I +R  +       +L A
Sbjct: 16  PRGSHMHPYFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA 75

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G +   I   +S+E   + L     E   R+D+ V NA  + + A L     S  +K+ 
Sbjct: 76  YG-DCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTS-WGAALESYPVSGWEKVM 133

Query: 119 EINVKSSILLMQDAAPHM------QKGSSVVFISSIAGYQPPSAMAM-YGVTKTALLGLT 171
           ++NV S    +Q   P +      +  + V+ I S+AG       A  YG +K AL  L+
Sbjct: 134 QLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLS 193

Query: 172 KALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA 230
           + LA E+  +   VN +APG  P+   + +  +    +A      + R G    MAA   
Sbjct: 194 RMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPEEMAALAI 253

Query: 231 FLASDDASYITGETLVVAGGM 251
            LA    +Y+TG  + + GG 
Sbjct: 254 SLAGTAGAYMTGNVIPIDGGF 274

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  221 bits (565), Expect = 3e-72
 Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 6/252 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           +  R +GK+A+VT ++ GIG   A     EGA VV+++R    + +  +++   G E   
Sbjct: 2   VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAA 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V +E   + L++  V ++G +D    NA       ++         +  + N+ S+
Sbjct: 62  LAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSA 121

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAPDT 182
            L  +   P +    G S+ F SS  G+    A +A Y  +K  L+GL +ALA E+    
Sbjct: 122 FLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARG 181

Query: 183 -RVNCVAPGFVPTHFAQALL--GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            RVN + PG   T    A L       R  +EG   L R+     +A A  +LASD AS+
Sbjct: 182 IRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF 241

Query: 240 ITGETLVVAGGM 251
           +TG  L+  GG 
Sbjct: 242 VTGAALLADGGA 253

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  221 bits (566), Expect = 4e-72
 Identities = 71/259 (27%), Positives = 121/259 (46%), Gaps = 15/259 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VI 64
            RF GK  ++T S+ GIG   A     EGA V I+ R +  +++  +++   G+    + 
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKIN 81

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL-KTKESVLDKLWEINVK 123
            ++  V+    + ++I+ T+ K+G+ID+ V NA  N             +  K +++N +
Sbjct: 82  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 141

Query: 124 SSILLMQDAAPHMQK-GSSVVFISSI-AGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           + I + Q    H+ K    +V +SSI AG Q  S    Y   K AL   T+  A ++   
Sbjct: 142 AVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQH 201

Query: 182 T-RVNCVAPGFVPTHFAQALLGND-------AVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
             RVN V+PG V T F  A+   +       +   + +    +   G    +A  I FLA
Sbjct: 202 GVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLA 261

Query: 234 SDD-ASYITGETLVVAGGM 251
             + +SYI G+++V  GG 
Sbjct: 262 DRNLSSYIIGQSIVADGGS 280

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  220 bits (562), Expect = 5e-72
 Identities = 71/260 (27%), Positives = 122/260 (46%), Gaps = 17/260 (6%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M KR +GK A++T S +GIG   AE    EGA+V I+     ++++A +    +G    
Sbjct: 1   SMMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADI---DIERARQAAAEIGPAAY 57

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   V+ +      I  TVE  G +D+ V NAA+    A +++      +KL+ INV  
Sbjct: 58  AVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAG 116

Query: 125 SILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           ++  +Q AA  M     G  ++ ++S AG +  + +A+Y  TK A++ LT++   ++   
Sbjct: 117 TLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKH 176

Query: 182 -TRVNCVAPGFVPT---------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
              VN +APG V                       ++ +       R+GT  ++     F
Sbjct: 177 RINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIF 236

Query: 232 LASDDASYITGETLVVAGGM 251
           LAS ++ YI  +T  V GG 
Sbjct: 237 LASAESDYIVSQTYNVDGGN 256

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  220 bits (563), Expect = 6e-72
 Identities = 74/262 (28%), Positives = 120/262 (45%), Gaps = 17/262 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VI 64
            RF  KVA++T S+ GIG   A     EGA V I+ R  + +++  +++ A G+    V 
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVN 61

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA---AVNPYAADLLKTKESVLDKLWEIN 121
            ++  V+ +  +  ++  T+ K+G++D+ V NA     +  +           D    +N
Sbjct: 62  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 121

Query: 122 VKSSILLMQDAAPHMQKGS-SVVFISSIA-GYQPPSAMAMYGVTKTALLGLTKALAAEMA 179
           ++S I L + A PH+      +V ISSIA G         Y + K A+   T+  A ++ 
Sbjct: 122 LRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLI 181

Query: 180 PDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEG-------KTLLNRLGTTGNMAAAIAF 231
               RVN ++PG V T F  A+   +   K                 +G   ++A  IAF
Sbjct: 182 QHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF 241

Query: 232 LASDD-ASYITGETLVVAGGMA 252
           LA    +SYI G  LVV GG +
Sbjct: 242 LADRKTSSYIIGHQLVVDGGSS 263

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  218 bits (559), Expect = 1e-71
 Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 7/251 (2%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
           +   + KV ++T  + G+G G+A R   EGA VVI+ R ++ +++A  +++    +++ +
Sbjct: 1   SNAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              V N    + +I++  EK+GRID+ + NAA N +         +  + +  I +  + 
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGN-FICPAEDLSVNGWNSVINIVLNGTF 119

Query: 127 LLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
              Q    +  +     +++ + +   +     +      K  +L +TK LA E      
Sbjct: 120 YCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYG 179

Query: 183 -RVNCVAPGFVPT-HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
            RVN +APG +     A  L  ++ + K       L RLGT   +A    +L SD+A+YI
Sbjct: 180 IRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYI 239

Query: 241 TGETLVVAGGM 251
            G  + + GG 
Sbjct: 240 NGTCMTMDGGQ 250

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  218 bits (558), Expect = 2e-71
 Identities = 74/255 (29%), Positives = 121/255 (47%), Gaps = 9/255 (3%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
             + RF+ KV +VT S  GIG   AE L  EGA+VV++    +  +   +++ A G   I
Sbjct: 2   PGSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAI 61

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
            +   VS+ +  K + D+T+ ++G ID  V NAA+        LL        K   +N+
Sbjct: 62  SVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNL 121

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
             ++   +     M  + G ++V  SS A +        YG+ K  + GLT+ L+ E+  
Sbjct: 122 DGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGG 178

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              R+N +APG + T   +       +   +     L+R+GT  ++     FL SD+AS+
Sbjct: 179 RNIRINAIAPGPIDTEANRTTT-PKEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASW 237

Query: 240 ITGETLVVAGGMASR 254
           ITG+   V GG   R
Sbjct: 238 ITGQIFNVDGGQIIR 252

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  218 bits (559), Expect = 3e-71
 Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 11/250 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
               +V +VT    GIG   AE     GA VV++     N D AV     +G +  G+  
Sbjct: 24  DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADV---NEDAAVRVANEIGSKAFGVRV 80

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+ +  +++++KT  K+GR+DV V NA       +++   E   D++  +NVK   L 
Sbjct: 81  DVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLC 139

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +   P M    G S++  +S       +    Y  +K A+  LT+A+A + A +  RVN
Sbjct: 140 SKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVN 199

Query: 186 CVAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            VAPG + + +   +         +R     + +++R+GT   +A A+ FLASD + + T
Sbjct: 200 AVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRFAT 259

Query: 242 GETLVVAGGM 251
           G  L V GG 
Sbjct: 260 GSILTVDGGS 269

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  217 bits (555), Expect = 5e-71
 Identities = 76/247 (30%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
           +RF  +  VV  + + IG   A R   EGA+VV++ +   +    AV +++ LG   + I
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              ++N    +  I    +K+G I   V  A        + +  E+   ++ ++N+ S  
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLF 123

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQ-PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
           L  + A P M KG ++V  SS AG          Y  +K A++  T+ LA E+ P  RVN
Sbjct: 124 LTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPKIRVN 183

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            V PG + T F         VR+ + G T L R G++ ++A  +AFLASDDA+Y+TG   
Sbjct: 184 AVCPGMISTTF-HDTFTKPEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGACY 242

Query: 246 VVAGGMA 252
            + GG+ 
Sbjct: 243 DINGGVL 249

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  217 bits (555), Expect = 7e-71
 Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 11/258 (4%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI--E 62
           +   RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +       E
Sbjct: 6   SPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAE 65

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           V+  +  VS+E   +  +  T E++GRID F  NA +            +  DK+  IN+
Sbjct: 66  VLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINL 125

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +   L ++     M  Q    VV  +S+ G +     + Y   K  ++GLT+  A E   
Sbjct: 126 RGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGR 185

Query: 181 DT-RVNCVAPGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
              R+N +APG + T   +  +            +         R G    +AA +AFL 
Sbjct: 186 YGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLL 245

Query: 234 SDDASYITGETLVVAGGM 251
           SDDASY+    + + GG 
Sbjct: 246 SDDASYVNATVVPIDGGQ 263

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  217 bits (554), Expect = 1e-70
 Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 8/250 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M    + KVA++T +  GIGL  +  L   GA VV++               ++G   + 
Sbjct: 5   MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADL---PETDLAGAAASVGRGAVH 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKS 124
            +  ++NE   + LID T++ +GR+D+   NAA +  A   + +    V D  + +N + 
Sbjct: 62  HVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARG 121

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           ++L+ + A P +    G ++V ISS   +        Y  TK A+  LT+ +A +     
Sbjct: 122 TMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHG 181

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            R N +APG V T   +  L    +        L  R+G    +A  + FLASD A++IT
Sbjct: 182 VRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFIT 240

Query: 242 GETLVVAGGM 251
           G+ +    G+
Sbjct: 241 GQVIAADSGL 250

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  217 bits (554), Expect = 1e-70
 Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 11/253 (4%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
               R+ GKV VVT   +GIG G+       GA VVI  +     +     L+      +
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKD----ESGGRALEQELPGAV 57

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            I+C V+ E   K L+ +T+ ++GR+D  V NA  +P      +T      +L E+N+  
Sbjct: 58  FILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLG 117

Query: 125 SILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
           +  L + A P+++K   +V+ ISS+ G    +    Y  TK A+  +TKALA + +P   
Sbjct: 118 TYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGV 177

Query: 183 RVNCVAPGFVPTHFAQALLGND----AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           RVNC++PG + T   + L        A  +       L R+G    + AA  FLAS +A+
Sbjct: 178 RVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EAN 236

Query: 239 YITGETLVVAGGM 251
           + TG  L+V GG 
Sbjct: 237 FCTGIELLVTGGA 249

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  217 bits (555), Expect = 1e-70
 Identities = 64/256 (25%), Positives = 117/256 (45%), Gaps = 12/256 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
                VA++T +  GIG   A  L  +G +V    R +  V++  +++   G + I +  
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEA 84

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+E   +N +   V K+G +D+ V NA +N   A +   K    D+   +N++ + L 
Sbjct: 85  DVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLT 144

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSA--MAMYGVTKTALLGLTKALAAEMAPDT-R 183
           +    P++  + G ++V +SSI G +  +      Y  TK A + + + LA E+     R
Sbjct: 145 LHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIR 204

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASDD 236
           VN V PG + T+ +           A+  +           + G + ++A  I FL S+ 
Sbjct: 205 VNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER 264

Query: 237 ASYITGETLVVAGGMA 252
           A ++TG  + + GG  
Sbjct: 265 ARHVTGSPVWIDGGQG 280

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  217 bits (555), Expect = 2e-70
 Identities = 67/248 (27%), Positives = 114/248 (45%), Gaps = 7/248 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIIC 68
           FQGKVA +T    G+G G+   L   GA  VI+SRK   +    E++ +  G +V  I C
Sbjct: 24  FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQC 83

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V +    +N + + ++  G  ++ + NAA N + +   +   +    + +I +  +  +
Sbjct: 84  DVRDPDMVQNTVSELIKVAGHPNIVINNAAGN-FISPTERLSPNAWKTITDIVLNGTAFV 142

Query: 129 MQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
             +    +   QKG++ + I++I        +      K  +  ++K+LAAE      R 
Sbjct: 143 TLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF 202

Query: 185 NCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           N + PG + T  A + L       K + G+    RLGT   +A   AFL SD AS+I G 
Sbjct: 203 NVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWINGA 262

Query: 244 TLVVAGGM 251
            +   GG 
Sbjct: 263 VIKFDGGE 270

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  215 bits (551), Expect = 4e-70
 Identities = 71/263 (26%), Positives = 122/263 (46%), Gaps = 19/263 (7%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVI 64
            RF  K  ++T S+ GIG   A     EGA+V I+ R  + +++  + +   G+   +V 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVN 61

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----I 120
            ++  V+ E  +  +I+ T++++G+IDV V NA           T       ++     +
Sbjct: 62  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKL 120

Query: 121 NVKSSILLMQDAAPHMQKGS-SVVFISSI-AGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           N+++ I + +   PH+      +V +SSI AG Q       Y + K AL   T++ A ++
Sbjct: 121 NLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180

Query: 179 APDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIA 230
           A    RVN V+PG V T F  A+   D   +              +   G   ++A  I 
Sbjct: 181 AKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL 240

Query: 231 FLASDDAS-YITGETLVVAGGMA 252
           FLA  + S YI G+++V  GG +
Sbjct: 241 FLADRNLSFYILGQSIVADGGTS 263

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  215 bits (549), Expect = 6e-70
 Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 16/262 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEV 63
                   VAVVT  + GIGL   E L   GA+V   +R  + +  A   L+    G  +
Sbjct: 2   KPYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARL 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
              +C V +    +   +      G   + V NA      +   +T +    +  ++   
Sbjct: 62  FASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFF 120

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           S I  ++   P +  +  +++V ++S+   QP   M      +  +  L +++A E AP 
Sbjct: 121 SVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPK 180

Query: 182 T-RVNCVAPGFVPTHFAQALL----------GNDAVRKALEGKTLLNRLGTTGNMAAAIA 230
             RVN +  G V +   +                  + A   +  L RLG     A AI 
Sbjct: 181 GVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAIL 240

Query: 231 FLASDDASYITGETLVVAGGMA 252
           FLAS  ++Y TG  + V+GG++
Sbjct: 241 FLASPLSAYTTGSHIDVSGGLS 262

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  214 bits (547), Expect = 1e-69
 Identities = 74/257 (28%), Positives = 126/257 (49%), Gaps = 8/257 (3%)

Query: 2   EKVNMAKRFQGKVAVVT-ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           ++++     +GKV +VT A+  GIG   A R  LEGA VVIS   ++ + +  ++L  LG
Sbjct: 12  KEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLG 71

Query: 61  I-EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           +  V  ++C V++ +    LI +TVEK GR+DV V NA +      ++   +   D++  
Sbjct: 72  LGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLN 130

Query: 120 INVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
           + + S +   + A  +      G  +V  +S+ G++   + + Y   K  ++ LT+  A 
Sbjct: 131 VTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAI 190

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           E      R+N V+P      F +    +  +   L       R      +AA IAFLASD
Sbjct: 191 EAVEFGVRINAVSPSIARHKFLEKTS-SSELLDRLASDEAFGRAAEPWEVAATIAFLASD 249

Query: 236 DASYITGETLVVAGGMA 252
            +SY+TGE + V+   A
Sbjct: 250 YSSYMTGEVVSVSSQRA 266

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  214 bits (547), Expect = 1e-69
 Identities = 69/247 (27%), Positives = 108/247 (43%), Gaps = 6/247 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIIC 68
            + KVA +T    GIG  +AE     G   VI+SR    V  A  KL  A G   + +  
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSM 84

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V         +D+ ++++GRID+ +  AA N +         +    + +I+   +  +
Sbjct: 85  DVRAPPAVMAAVDQALKEFGRIDILINCAAGN-FLCPAGALSFNAFKTVMDIDTSGTFNV 143

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +          G  +V I++  G +  +     G  K A+  +T+ LA E  P   RVN
Sbjct: 144 SRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN 203

Query: 186 CVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
            +APG +  T   + L G  A        + L RLG    +A ++ +LAS  ASY+TG  
Sbjct: 204 SLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTGAV 263

Query: 245 LVVAGGM 251
           LV  GG 
Sbjct: 264 LVADGGA 270

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  212 bits (543), Expect = 3e-69
 Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 6/246 (2%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHV 70
            +VA+VT ++ G GL +A R    G  V       + +++       A   +V+ +   V
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADV 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILL 128
           ++E      I  T+E++G IDV V NA +     A  L  T     DK+  +NV+   L 
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            +   PHM  Q    +V I+S+A        + Y  +K A+L LTK++A + A    R N
Sbjct: 122 CRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCN 181

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            V PG + T   Q  L    +R  +  +     +GT   +A A+ FLA +DA+Y+ G  L
Sbjct: 182 AVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAAL 241

Query: 246 VVAGGM 251
           V+ G  
Sbjct: 242 VMDGAY 247

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  211 bits (540), Expect = 7e-69
 Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M +R + K+AV+T    GIG  +AER  +EGA + I+        +A   ++ LG  V+ 
Sbjct: 1   MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNLGRRVLT 58

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           + C VS     +    + +  +GR D+ V NA + P      +       K +EINV S 
Sbjct: 59  VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSG 117

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L+ +   P M       ++ ++S   +    A   Y  TK A +G T+ALA+++  D  
Sbjct: 118 FLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
            VN +AP  V T   +A   +            + RL    ++  A AFLASDDAS+ITG
Sbjct: 178 TVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITG 237

Query: 243 ETLVVAGGMA 252
           +TL V GGM 
Sbjct: 238 QTLAVDGGMV 247

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  212 bits (542), Expect = 8e-69
 Identities = 82/256 (32%), Positives = 117/256 (45%), Gaps = 12/256 (4%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
               GKVA+VT +  GIGL VA RL  EG  V+ +     + D A      +G       
Sbjct: 25  PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADI---DGDAADAAATKIGCGAAACR 81

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+EQ    ++D  V  +G +D  V NA V    A L+ T     D++  IN++ + L
Sbjct: 82  VDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWL 140

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
             + AAP M  + G ++V +SS+AG         YG++K  ++ L++  AAE+     R 
Sbjct: 141 CTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRS 200

Query: 185 NCVAPGFVPT-----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           N + P FV T       A       A         L  R+     MA  + FL SDDAS 
Sbjct: 201 NTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM 260

Query: 240 ITGETLVVAGGMASRL 255
           ITG T +  GG  + L
Sbjct: 261 ITGTTQIADGGTIAAL 276

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  212 bits (542), Expect = 1e-68
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 9/255 (3%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +   R Q KVA++T    GIG   A+     GA VVI+     +  K    + +    + 
Sbjct: 9   SSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VIS 67

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV-NPYAADLLKTKESVLDKLWEINVK 123
            + C V+ ++  +NL+D T+ K+G++D+   N  V +     +L+       ++ +INV 
Sbjct: 68  FVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVY 127

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQP-PSAMAMYGVTKTALLGLTKALAAEMAP 180
            + L+ + AA  M   K  S+VF +SI+ +        +Y  TK A+LGLT +L  E+  
Sbjct: 128 GAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGE 187

Query: 181 DT-RVNCVAPGFVPTHFAQALLGND---AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
              RVNCV+P  V +     + G D       A +   L   L    ++A A+A+LA D+
Sbjct: 188 YGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDE 247

Query: 237 ASYITGETLVVAGGM 251
           + Y++G  LV+ GG 
Sbjct: 248 SKYVSGLNLVIDGGY 262

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  211 bits (539), Expect = 2e-68
 Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 23/265 (8%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IE 62
            M  + +GK A+VT ST GIG  +A  L  EGA+V+I+ R+++NV++ +++++A      
Sbjct: 3   AMHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAI 62

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
           +  ++  +  EQ         +EKY ++D+ + N  +     +     +    KL+E+N+
Sbjct: 63  LQPVVADLGTEQ----GCQDVIEKYPKVDILINNLGI-FEPVEYFDIPDEDWFKLFEVNI 117

Query: 123 KSSILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            S + L +     M +     V+FI+S A   P   MA Y  TKT  L L+++LA     
Sbjct: 118 MSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTG 177

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVR-------------KALEGKTLLNRLGTTGNMA 226
               VN + PG   T   + +L +                 K     +++ RL     +A
Sbjct: 178 TNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIA 237

Query: 227 AAIAFLASDDASYITGETLVVAGGM 251
             + FL+S  +S I G  L + GG+
Sbjct: 238 HLVTFLSSPLSSAINGSALRIDGGL 262

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  210 bits (536), Expect = 2e-68
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 13/250 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M     G+  +VT + +GIG G  + L   GA VV  SR Q      ++ L      +  
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQA----DLDSLVRECPGIEP 56

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   + + +      ++ +   G +D+ V NAAV       L+  +   D+ +E+N+++ 
Sbjct: 57  VCVDLGDWE----ATERALGSVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAV 111

Query: 126 ILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
           I + Q  A  +       ++V +SS    +  +  ++Y  TK AL  LTK +A E+ P  
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN V P  V T   QA   +    K +  +  L +     ++  AI FL SD +   T
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231

Query: 242 GETLVVAGGM 251
           G TL V GG 
Sbjct: 232 GSTLPVEGGF 241

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  210 bits (537), Expect = 3e-68
 Identities = 64/256 (25%), Positives = 122/256 (47%), Gaps = 16/256 (6%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIIC 68
           QGK+AVVTA + G+G   A  L   GA +++ SR ++ ++ A  ++ +L  G +V  +  
Sbjct: 6   QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAG 65

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +        L +      G  D+ V +    P     ++      D+ + +  +S++ +
Sbjct: 66  DIREPGDIDRLFE-KARDLGGADILVYSTGG-PRPGRFMELGVEDWDESYRLLARSAVWV 123

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            + AA  M  +    +V+I S+   +P   +A+  + +  ++G+ + LA E+AP    VN
Sbjct: 124 GRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN 183

Query: 186 CVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            V P  + T   ++L            +   K++  +  + R+G    +A+ +AFLAS+ 
Sbjct: 184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLASEK 243

Query: 237 ASYITGETLVVAGGMA 252
           AS+ITG  + V GG  
Sbjct: 244 ASFITGAVIPVDGGAH 259

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  210 bits (538), Expect = 3e-68
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 10/249 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
              GK A++T ++ GIG  VA      GA V +++R    +    +++  +G + + I C
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRC 88

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+     + ++D+   + G ID+ V NA +      +L        ++ + NV    L 
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIV-SVQAMLDMPLEEFQRIQDTNVTGVFLT 147

Query: 129 MQDAAPHMQK---GSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
            Q AA  M     G +++  +S++G+    P  ++ Y  +K A++ LTKA+A E+AP   
Sbjct: 148 AQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQI 207

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN V+PG++ T   + L          E K  L R+G    +     +LAS  +SY+TG
Sbjct: 208 RVNSVSPGYIRTELVEPL---ADYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMTG 264

Query: 243 ETLVVAGGM 251
             +V+ GG 
Sbjct: 265 SDIVIDGGY 273

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  209 bits (535), Expect = 4e-68
 Identities = 63/252 (25%), Positives = 107/252 (42%), Gaps = 22/252 (8%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
                 +VT  ++GIG  V E L       VI+   Q+               +  I   
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ---------SFSAENLKFIKAD 52

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           ++ +Q   N++D    K    D   LNA +      +       + K+ ++NV SSI  +
Sbjct: 53  LTKQQDITNVLDII--KNVSFDGIFLNAGILIKG-SIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
           +    +++ G+S+VF  S   +        Y ++K A+  +TK+LA ++A    RVN V 
Sbjct: 110 KGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169

Query: 189 PGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           PG V T   + L+           D  +K  E +  LNR+     +A  + FL SD + +
Sbjct: 170 PGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSKF 229

Query: 240 ITGETLVVAGGM 251
           +TG  + + GG 
Sbjct: 230 MTGGLIPIDGGY 241

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  209 bits (535), Expect = 6e-68
 Identities = 56/258 (21%), Positives = 112/258 (43%), Gaps = 8/258 (3%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---SSRKQKNVDKAVEKLK 57
           M         + KV V+    + +G   A+   LE  ++V+    ++     +K  ++L+
Sbjct: 1   MSLTKY-HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE 59

Query: 58  ALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
             G +V      +SNE+    L D   +++G++D+ +           +++T E+  D +
Sbjct: 60  DQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLKKP-IVETSEAEFDAM 118

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
             IN K +   ++ AA HM     ++ I++          + Y   K  +   T+A + E
Sbjct: 119 DTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKE 178

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +      VN +APG + T F       ++     + + + N+L    ++A  I FL + D
Sbjct: 179 LMKQQISVNAIAPGPMDTSFFYGQETKEST-AFHKSQAMGNQLTKIEDIAPIIKFLTT-D 236

Query: 237 ASYITGETLVVAGGMASR 254
             +I G+T+   GG  +R
Sbjct: 237 GWWINGQTIFANGGYTTR 254

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  210 bits (538), Expect = 7e-68
 Identities = 67/246 (27%), Positives = 115/246 (46%), Gaps = 3/246 (1%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIGI 66
           R + + A+VT    GIG   A     EGA V I+    ++++  +    ++  G + + +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              +S+E   ++L+ K  E  G +D+  L A       ++         + + +NV +  
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALF 165

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            + Q+A P + KG+S++  SSI  YQP   +  Y  TK A+L  ++ LA ++A    RVN
Sbjct: 166 WITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVN 225

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            VAPG + T    +             +T + R G    +A    +LAS ++SY+T E  
Sbjct: 226 IVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEVH 285

Query: 246 VVAGGM 251
            V GG 
Sbjct: 286 GVCGGE 291

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  209 bits (534), Expect = 7e-68
 Identities = 72/255 (28%), Positives = 127/255 (49%), Gaps = 16/255 (6%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIGIICH 69
            KVA+VT   QGIG G++E+L  +G  + ++   ++++   + ++ ++A   + + +   
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLD 61

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+++ +  + ID+  EK G  DV V NA +      LL+  E  L +++ +NV S    +
Sbjct: 62  VTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGI 120

Query: 130 QDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           Q A+    +      ++  +SIA  Q    ++ Y  TK A+ GLT+A A E+AP    VN
Sbjct: 121 QAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVN 180

Query: 186 CVAPGFVPT---------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
             APG V T                      K       L R     ++A  ++FLAS++
Sbjct: 181 AYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN 240

Query: 237 ASYITGETLVVAGGM 251
           ++Y+TG+ ++V GGM
Sbjct: 241 SNYVTGQVMLVDGGM 255

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  208 bits (532), Expect = 1e-67
 Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 13/250 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M   F G  A+VT + +GIG    + L   GA VV  +R        +  L      +  
Sbjct: 1   MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNS----DLVSLAKECPGIEP 56

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   + +     +  +K +   G +D+ V NAA+       L+  +   D+ + +N++S 
Sbjct: 57  VCVDLGDW----DATEKALGGIGPVDLLVNNAALV-IMQPFLEVTKEAFDRSFSVNLRSV 111

Query: 126 ILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
             + Q  A  M       S+V +SS+  +     +  Y  TK A+  LTKA+A E+ P  
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN V P  V T   + +  +    + L+ +  L +     ++  +I FL SD ++  +
Sbjct: 172 IRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS 231

Query: 242 GETLVVAGGM 251
           G  ++V  G 
Sbjct: 232 GGGILVDAGY 241

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  208 bits (533), Expect = 2e-67
 Identities = 71/243 (29%), Positives = 124/243 (51%), Gaps = 4/243 (1%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
             KVA+VT +++GIG  +A RL  +G +VVI+ + K    ++   K++A G + +     
Sbjct: 26  TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQAD 85

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS+    + L     E +G +DV V NA + P    + +T ++V D++  +N+K +   +
Sbjct: 86  VSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPLTT-IAETGDAVFDRVIAVNLKGTFNTL 144

Query: 130 QDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVA 188
           ++AA  ++ G  ++ +S+        +  +Y   K  +  +T  L+ E+   D  VN VA
Sbjct: 145 REAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVA 204

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA 248
           PG   T        +D VR        L RLGT  ++A A+AFLA  D +++ G+ L   
Sbjct: 205 PGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVLRAN 263

Query: 249 GGM 251
           GG+
Sbjct: 264 GGI 266

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  207 bits (530), Expect = 3e-67
 Identities = 68/254 (26%), Positives = 120/254 (47%), Gaps = 9/254 (3%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
           + R  GKVA++T  T GIGL +A +   EGA V+I+ R     +KA + +     ++   
Sbjct: 1   SNRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFF 59

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
               S+E     L D T + +G +   V NA +      + +T  +   KL  +N+    
Sbjct: 60  QHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVF 118

Query: 127 LLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
              +     M+    G+S++ +SSI G+    ++  Y  +K A+  ++K+ A + A    
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 183 --RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN V PG++ T     L G +    +   KT +  +G   ++A    +LAS+++ + 
Sbjct: 179 DVRVNTVHPGYIKTPLVDDLPGAEE-AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFA 237

Query: 241 TGETLVVAGGMASR 254
           TG   VV GG  ++
Sbjct: 238 TGSEFVVDGGYTAQ 251

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  207 bits (530), Expect = 3e-67
 Identities = 73/252 (28%), Positives = 120/252 (47%), Gaps = 14/252 (5%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT + QGIG  +A RL  +G +V I+            ++   G   + +   VS+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 62

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                  +++  +  G  DV V NA V P +  +      ++DK++ INVK  I  +Q A
Sbjct: 63  RDQVFAAVEQARKTLGGFDVIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAA 121

Query: 133 APHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K   G  ++   S AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 122 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 181

Query: 189 PGFVPT--------HFAQAL-LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           PG V T          ++A              +  L RL    ++AA +++LAS D+ Y
Sbjct: 182 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 241

Query: 240 ITGETLVVAGGM 251
           +TG++L++ GGM
Sbjct: 242 MTGQSLLIDGGM 253

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  207 bits (529), Expect = 5e-67
 Identities = 76/251 (30%), Positives = 117/251 (46%), Gaps = 14/251 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
             F GK  +VT   +GIG  +A+    EGA V +   + +  + A        I      
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEA------IGGAFFQ 55

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             + +E+ R   +++     GR+DV V NAA+       L  +     ++ E+N+ + + 
Sbjct: 56  VDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG-SALTVRLPEWRRVLEVNLTAPMH 114

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L   AA  M    G ++V ++S+ G       A Y  +K  L+ LT++LA ++AP   RV
Sbjct: 115 LSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 174

Query: 185 NCVAPGFVPT----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           N VAPG + T             +  R+  E    L RLG    +A A+ FLAS+ AS+I
Sbjct: 175 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI 234

Query: 241 TGETLVVAGGM 251
           TG  L V GGM
Sbjct: 235 TGAILPVDGGM 245

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  207 bits (529), Expect = 6e-67
 Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
              + KV +VT ++ GIG  +AER   EG+ V+  S                  +   I 
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIE 52

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C V+N    K  ID   ++YG I V V NA +  Y   +         ++ ++N+     
Sbjct: 53  CDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESYG-KIESMSMGEWRRIIDVNLFGYYY 111

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVN 185
             + A P+M   +  S+V ISS+         + Y  +K A++GLTK++A + AP  R N
Sbjct: 112 ASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPLLRCN 171

Query: 186 CVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            V P  + T   +              +        +  + R+G    +A+A+AFLAS +
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE 231

Query: 237 ASYITGETLVVAGGMASRL 255
           AS+ITG  L V GG++ R 
Sbjct: 232 ASFITGTCLYVDGGLSIRA 250

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  207 bits (529), Expect = 6e-67
 Identities = 85/262 (32%), Positives = 129/262 (49%), Gaps = 23/262 (8%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M + F  KVA+VT  + GIGL V + L   GA VV  S  +K+     +  K       
Sbjct: 8   HM-EEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK------- 59

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
                V+NE+  K  ++KT +KYGRID+ V NA +  Y+  L  T   +  ++ ++NV  
Sbjct: 60  ---IDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQYS-PLHLTPTEIWRRIIDVNVNG 115

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
           S L+ +   P M      S++ I+S+  Y      A Y  +K ALLGLT+++A + AP  
Sbjct: 116 SYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPKI 175

Query: 183 RVNCVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           R N V PG + T                  +   +    +  + R+G    +A  +AFLA
Sbjct: 176 RCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLA 235

Query: 234 SDDASYITGETLVVAGGMASRL 255
           SD +S+ITG  L V GG+ S+L
Sbjct: 236 SDRSSFITGACLTVDGGLLSKL 257

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  207 bits (528), Expect = 9e-67
 Identities = 73/257 (28%), Positives = 112/257 (43%), Gaps = 17/257 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
              G+ A+VT  ++GIG  +A  L   GA+V I+          V  L+  G     +  
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGF---AVEV 65

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+        + K ++  G  D+   NA V+      +   +   D  +++N +   L 
Sbjct: 66  DVTKRASVDAAMQKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLA 124

Query: 129 MQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            Q A  H         +V  +S+A       +A Y  +K A+ G T+ALA EMAP   RV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184

Query: 185 NCVAPGFVPT---------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           NCV PGFV T               +  +AVR      T L R+    ++A  + FLASD
Sbjct: 185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVADVVVFLASD 244

Query: 236 DASYITGETLVVAGGMA 252
            A ++TG+ + V GG+ 
Sbjct: 245 AARFMTGQGINVTGGVR 261

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  206 bits (527), Expect = 1e-66
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 13/258 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVI 64
           M    +GK  ++T S+QGIGL  A      GA V +  RK   N+D+ +  ++A G +  
Sbjct: 1   MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAA 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
                ++  +  + L+D+ V K+G IDV + NA        L +  ++  D + + N++S
Sbjct: 61  FFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRS 120

Query: 125 SILLMQDAAPHM-------QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAA 176
            ++  + A PH+        + S+V+   SIAG+        +YG  K  L  + K    
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
               D  R N V+PG V T F         VR  +     + R GT   MA A  F AS 
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH 238

Query: 236 DAS-YITGETLVVAGGMA 252
            AS YITG+ L + GG  
Sbjct: 239 LASGYITGQVLDINGGQY 256

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  205 bits (525), Expect = 1e-66
 Identities = 62/248 (25%), Positives = 105/248 (42%), Gaps = 16/248 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVS 71
            +A+VT +    G    E L  +G +VV       +  ++   + +  G   +       
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTIAL------- 54

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILLM 129
            EQ  + L+D T++    ID  V N  +        L  T E+ + +++E      ILL+
Sbjct: 55  AEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLL 114

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A   +    G+SV+FI+S  G +P +   +YG  + A + L ++ A  ++ D   +  
Sbjct: 115 QSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYA 174

Query: 187 VAPGFVPT---HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           + P F              N  +R+ ++    L RLG    M A I FLAS  A+ I G+
Sbjct: 175 IGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDEMGALITFLASRRAAPIVGQ 234

Query: 244 TLVVAGGM 251
                GG 
Sbjct: 235 FFAFTGGY 242

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  206 bits (526), Expect = 2e-66
 Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 20/256 (7%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
              + F+GKVA+VT +  GIG  V   L   GA V +        D+AV  + A     +
Sbjct: 21  QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAV-------ADRAVAGIAA----DL 69

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   +    +   L        GR+D+ V NA V      + +T ++       +NV++
Sbjct: 70  HLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEA 128

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
              + + A P M    G ++V ++S  G +P    A+Y +TK AL  LT+ +  + AP  
Sbjct: 129 PFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQG 188

Query: 183 -RVNCVAPGFVPT-----HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            R+N V P  V T      FA+     D     L     L R+    ++A  + FLASD 
Sbjct: 189 IRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDA 248

Query: 237 ASYITGETLVVAGGMA 252
           A Y+ G  + V GG A
Sbjct: 249 ARYLCGSLVEVNGGKA 264

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  204 bits (522), Expect = 5e-66
 Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 9/248 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  G  A VT +  GIGL +       GA +++  R+   +D+A ++L         I+ 
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG--AAVAARIVA 65

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++ +          E    + + V +A +     D L+T ++   ++  +NV      
Sbjct: 66  DVTDAEAMTAAAA-EAEAVAPVSILVNSAGIA-RLHDALETDDATWRQVMAVNVDGMFWA 123

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
            +     M  +   ++V + S++G     P   + Y  +K A+  LT+ALAAE A    R
Sbjct: 124 SRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVR 183

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN +APG+V T     +     + +     T + R G    +AAA  FLAS  ASY+TG 
Sbjct: 184 VNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASYVTGA 243

Query: 244 TLVVAGGM 251
            L V GG 
Sbjct: 244 ILAVDGGY 251

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  205 bits (523), Expect = 5e-66
 Identities = 73/254 (28%), Positives = 130/254 (51%), Gaps = 8/254 (3%)

Query: 5   NMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGI 61
           +M + F  +G+VA+VT  ++G+G G+A+ L   G SVV++SR  +   +A +KL +  G+
Sbjct: 12  HMKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV 71

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
           E +   C VSN +  K L++   EK+G++D  V  A +N       +       ++ E+N
Sbjct: 72  ETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGIN-RRHPAEEFPLDEFRQVIEVN 130

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEM 178
           +  +  + ++A   +      S++ I S+   +     ++ Y  +K  +  LTKALA E 
Sbjct: 131 LFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEW 190

Query: 179 APD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
                RVN +APG+  T   +A+  +      +  +  L R G   ++     FLAS++A
Sbjct: 191 GRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEA 250

Query: 238 SYITGETLVVAGGM 251
            Y+TG+ + V GG 
Sbjct: 251 KYVTGQIIFVDGGW 264

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  205 bits (523), Expect = 6e-66
 Identities = 60/255 (23%), Positives = 106/255 (41%), Gaps = 9/255 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVI 64
           M  +    VA+VT   +GIGLG+A  L   G  + I+     + V   + +L  LG  VI
Sbjct: 23  MMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVI 82

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVK 123
            +   +++    +  +D  V ++GRID  V NA +     D  L  K    D +  +N++
Sbjct: 83  FLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLR 142

Query: 124 SSILLMQDAAPHM-----QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
            ++   Q     M     +   S++ I+S++          Y ++K  L   ++ LA  +
Sbjct: 143 GTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRL 202

Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           A     V  V PG + +    A+           G   + R G   ++   +A LA    
Sbjct: 203 AETGIAVFEVRPGIIRSDMTAAV-SGKYDGLIESGLVPMRRWGEPEDIGNIVAGLAGGQF 261

Query: 238 SYITGETLVVAGGMA 252
            + TG  +   GG++
Sbjct: 262 GFATGSVIQADGGLS 276

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  204 bits (522), Expect = 8e-66
 Identities = 69/261 (26%), Positives = 123/261 (47%), Gaps = 15/261 (5%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEV 63
           + +K   GKVA+ T + +GIG G+A  LG  GASVV++     K  ++ V +LK LG + 
Sbjct: 14  DASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQG 73

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           + I   +S       L DK V  +G +D  + N+ +  +    L+  + + DK++ +N +
Sbjct: 74  VAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCD-ELEVTQELFDKVFNLNTR 132

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-D 181
               + Q    H ++G  ++  SSIA         A+Y  +K A+ G  +A A +     
Sbjct: 133 GQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKG 192

Query: 182 TRVNCVAPGFVPT-----------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA 230
             VNC+APG V T                 +  + + + L     L R+G   ++  A++
Sbjct: 193 VTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVS 252

Query: 231 FLASDDASYITGETLVVAGGM 251
            L  +++ +I G+ + + GG 
Sbjct: 253 ALCQEESEWINGQVIKLTGGG 273

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  204 bits (521), Expect = 9e-66
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 11/254 (4%)

Query: 9   RFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVI--SSRKQKNVDKAVEKLKALGIEVI 64
             +GKV VVT  +  +G+G+  A      GA+V I  +SR Q   +   E  K  GI+  
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAK 76

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
              C V + +  + L+   V  +G+ID F+ NA      + +L       + + ++++  
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA-TADSGILDGSVEAWNHVVQVDLNG 135

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +    +    H   +   S+V  +S++G+    P     Y V K   + + ++LA E   
Sbjct: 136 TFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRD 195

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN ++PG++ T  +  +      ++       + R G    +  A  + ASD ++Y 
Sbjct: 196 FARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDASTYT 253

Query: 241 TGETLVVAGGMASR 254
           TG  L++ GG  +R
Sbjct: 254 TGADLLIDGGYTTR 267

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  203 bits (520), Expect = 1e-65
 Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 8/246 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R  GK  +VT +  GIG    +    EGAS+V   R         E + AL  E I ++
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDR---EERLLAEAVAALEAEAIAVV 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+ +  + +  + +E++GR+      A V   +A          +K+  +N+  S L
Sbjct: 59  ADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 128 LMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           + + A   +++G S+V   S+AG      +A Y   K  ++GL + LA E+A    RVN 
Sbjct: 118 VARKAGEVLEEGGSLVLTGSVAGLGAFG-LAHYAAGKLGVVGLARTLALELARKGVRVNV 176

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           + PG + T     L       +   G + L R G    +A A  FL S++++YITG+ L 
Sbjct: 177 LLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY 234

Query: 247 VAGGMA 252
           V GG +
Sbjct: 235 VDGGRS 240

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  203 bits (520), Expect = 1e-65
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 14/261 (5%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEV 63
            +  R  GKVA+VT S +GIG  VA  LG  GA VV++ +   K+ +K V ++KALG + 
Sbjct: 11  YIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDA 70

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           I I   +        L D+ V  +G +D+ V N+ V  +   L    E   D+++ +N +
Sbjct: 71  IAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH-LKDVTEEEFDRVFSLNTR 129

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-D 181
               + ++A  H+ +G  +V  SS           ++Y  +K A+    +  + +     
Sbjct: 130 GQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189

Query: 182 TRVNCVAPGFVPT----------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
             VN VAPG   T                   +  ++     + L+R G   ++A  + F
Sbjct: 190 ITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVGF 249

Query: 232 LASDDASYITGETLVVAGGMA 252
           L S +  ++ G+ L + GG A
Sbjct: 250 LVSKEGEWVNGKVLTLDGGAA 270

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  203 bits (519), Expect = 1e-65
 Identities = 69/251 (27%), Positives = 112/251 (44%), Gaps = 11/251 (4%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R QGKVA+VT    G+GL V + L  EGA V  S     N     +    LG   + + 
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDI---NEAAGQQLAAELGERSMFVR 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             VS+E     ++     + G ++V V NA +     D+   +     +L +IN +S  +
Sbjct: 59  HDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFI 117

Query: 128 LMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT---R 183
             Q     M++ G S++ ++S++ + P    A Y  +K A+  LT+A A          R
Sbjct: 118 GCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIR 177

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN---MAAAIAFLASDDASYI 240
           VN + P  + T   QA L     ++ +     LNR G       +A  + FLASD++S +
Sbjct: 178 VNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM 237

Query: 241 TGETLVVAGGM 251
           +G  L     +
Sbjct: 238 SGSELHADNSI 248

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  204 bits (522), Expect = 2e-65
 Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 12/254 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-----LGIEV 63
             QG+VA+VT    GIG  + + L   G++VVI+SRK + +  A ++L+A         V
Sbjct: 15  LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARV 74

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           I I C++ NE+   NL+  T++ +G+I+  V N     + +            + E N+ 
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQ-FLSPAEHISSKGWHAVLETNLT 133

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
            +  + +        + G S+V I               G  +  +  LTK+LA E A  
Sbjct: 134 GTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 192

Query: 182 -TRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
             R+NCVAPG + +  A    G    +  +    K    R+G    +++ + FL S  AS
Sbjct: 193 GIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAAS 252

Query: 239 YITGETLVVAGGMA 252
           +ITG+++ V GG +
Sbjct: 253 FITGQSVDVDGGRS 266

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  204 bits (521), Expect = 2e-65
 Identities = 65/245 (26%), Positives = 124/245 (50%), Gaps = 3/245 (1%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
           + +GK  ++T    GIG  V+     EGA++ I+   ++ + ++  + ++  G++ + + 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+EQH K+++ +TV + G +++ V N A       L       L+K + IN+ S   
Sbjct: 104 GDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFH 163

Query: 128 LMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + + A  H+++G  ++  +SI  Y+    +  Y  TK A++  T++L+  +     RVN 
Sbjct: 164 VTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNG 223

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           VAPG + T    +      V         + R G    +A A  +LAS D+SY+TG+ + 
Sbjct: 224 VAPGPIWTPLIPSSFDEKKV-SQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQMIH 282

Query: 247 VAGGM 251
           V GG+
Sbjct: 283 VNGGV 287

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  203 bits (518), Expect = 2e-65
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 7/252 (2%)

Query: 6   MAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           M   F   GK A+VT S +G+G   AE L   GA V+++  +   + ++V+ L   G + 
Sbjct: 1   MTALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDA 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
            G+   V++E   +    K   +   +D+ + NA +  Y   +++ +     K+ + N+ 
Sbjct: 61  HGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQ-YRKPMVELELENWQKVIDTNLT 119

Query: 124 SSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           S+ L+ + AA  M     G  ++ I S+        +A Y   K  +  LT ++AAE A 
Sbjct: 120 SAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQ 179

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              + N + PG++ T    AL+ +      ++  T   R G    +     FL+S  + Y
Sbjct: 180 FNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDY 239

Query: 240 ITGETLVVAGGM 251
           I G+ + V GG 
Sbjct: 240 INGQIIYVDGGW 251

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  203 bits (519), Expect = 2e-65
 Identities = 68/255 (26%), Positives = 122/255 (47%), Gaps = 7/255 (2%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKAL 59
            + +  +    GK A VT  ++GIG  +A+RL LEGA+V ++     +     V +++  
Sbjct: 20  FQSMMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA 79

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G   + I     + +  +  I +TVE  G +D+ V +A +   A  L +T  +  D++  
Sbjct: 80  GGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAP-LEETTVADFDEVMA 138

Query: 120 INVKSSILLMQDAAPHMQKGSSVVFISS-IAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           +N ++  + ++ A+ H+  G  ++ I S +A   P   +++Y  +K AL GLTK LA ++
Sbjct: 139 VNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDL 198

Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
            P    VN V PG   T    A        +A   +      G   ++A  +A+LA    
Sbjct: 199 GPRGITVNIVHPGSTDTDMNPAD---GDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQG 255

Query: 238 SYITGETLVVAGGMA 252
            ++TG +L + GG  
Sbjct: 256 KFVTGASLTIDGGAN 270

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  202 bits (516), Expect = 4e-65
 Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 15/245 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
                  ++T ++Q +GL  A RL   G  V+IS R +     +V +L+  G   +    
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTE---HASVTELRQAGAVALY--G 78

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
             S E      ID    +   +   V NA+   + A+    +     +++ +++ +  L+
Sbjct: 79  DFSCETGIMAFIDLLKTQTSSLRAVVHNASE--WLAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNC 186
                P +   + + +V IS     +  S    Y  TK  L  LT + AA  AP  +VN 
Sbjct: 137 NLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAPLVKVNG 196

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           +AP  +          + A R     K+ L        +  ++ +L    ++Y+TG TL 
Sbjct: 197 IAPALLMF----QPKDDAAYRANALAKSALGIEPGAEVIYQSLRYLLD--STYVTGTTLT 250

Query: 247 VAGGM 251
           V GG 
Sbjct: 251 VNGGR 255

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  201 bits (513), Expect = 1e-64
 Identities = 55/256 (21%), Positives = 99/256 (38%), Gaps = 15/256 (5%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           M           ++ +VT ++ GIG   A      GA+V++  R ++ + +    +    
Sbjct: 1   MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEET 60

Query: 61  ---IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL 117
               +   +       ++ + L  +    Y R+D  + NA +      + +    V   +
Sbjct: 61  GRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDV 120

Query: 118 WEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
            ++NV ++ +L Q   P +      S+VF SS  G Q  +    Y  +K A  G+ + LA
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 180

Query: 176 AEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            E     RVNC+ PG   T          A+R +        +L T  ++     +L  D
Sbjct: 181 DEYQQRLRVNCINPGGTRT----------AMRASAFPTEDPQKLKTPADIMPLYLWLMGD 230

Query: 236 DASYITGETLVVAGGM 251
           D+   TG T     G 
Sbjct: 231 DSRRKTGMTFDAQPGR 246

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  201 bits (514), Expect = 2e-64
 Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 15/259 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
              +GKVA+VT + +GIG  +A  LG  G  V+++ +   ++ ++ V  +K  G +   +
Sbjct: 25  ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 84

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
             +V   +    + ++ V+ +G++D+   N+ V  +   +        D+++ IN +   
Sbjct: 85  KANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH-VKDVTPEEFDRVFTINTRGQF 143

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            + ++A  H++ G  ++ + SI G        A+Y  +K A+    + +A +MA     V
Sbjct: 144 FVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITV 203

Query: 185 NCVAPGFVPT-----------HFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           N VAPG + T              + L   +    A    + L R+G   ++A  + FLA
Sbjct: 204 NVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA 263

Query: 234 SDDASYITGETLVVAGGMA 252
           S+D  ++TG+ + + GG  
Sbjct: 264 SNDGGWVTGKVIGIDGGAC 282

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  200 bits (511), Expect = 2e-64
 Identities = 74/252 (29%), Positives = 117/252 (46%), Gaps = 18/252 (7%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R  GKV ++TA+ QGIG   A     EGA V+ +     N  K  E  K  GI+    +
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI---NESKLQELEKYPGIQTR--V 56

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             V+ ++     ID+   +  R+DV    A        +L  +E   D    +NV+S  L
Sbjct: 57  LDVTKKKQ----IDQFANEVERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAPDT-R 183
           +++   P M  QK  +++ +SS+A          +Y  TK A++GLTK++AA+      R
Sbjct: 112 MIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171

Query: 184 VNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            NCV PG V T   Q  +      +  R     +    R  T   +A    +LASD+++Y
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY 231

Query: 240 ITGETLVVAGGM 251
           +TG  +++ GG 
Sbjct: 232 VTGNPVIIDGGW 243

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  200 bits (512), Expect = 2e-64
 Identities = 67/249 (26%), Positives = 105/249 (42%), Gaps = 14/249 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M+ R  GKVA+V+   +G+G      +  EGA VV         ++       L      
Sbjct: 1   MSGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDI---LDEEGKAMAAELADAARY 57

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V+     K  +D  V  +G + V V NA +      +     +   ++ ++N+   
Sbjct: 58  VHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGV 116

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
            L ++     M      S++ ISSI G     A   Y  TK A+ GLTK+ A E+ P   
Sbjct: 117 FLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGI 176

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN + PG V T     +  +         +T L R      ++  + +LASD++SY TG
Sbjct: 177 RVNSIHPGLVKTPMTDWVPEDIF-------QTALGRAAEPVEVSNLVVYLASDESSYSTG 229

Query: 243 ETLVVAGGM 251
              VV GG 
Sbjct: 230 AEFVVDGGT 238

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  199 bits (508), Expect = 8e-64
 Identities = 65/256 (25%), Positives = 98/256 (38%), Gaps = 15/256 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGII 67
            F  K  +VT   +GIGL     +   GA+V +  R   +  +  EK+ K  G++     
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 70

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C VSN       I +     G I   + NA V        +        ++++NV     
Sbjct: 71  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV-SVVKPATELTHEDFAFVYDVNVFGVFN 129

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAM-------YGVTKTALLGLTKALAAE 177
             +  A      Q+  S+V  SS++      +          Y  +K A   L K LAAE
Sbjct: 130 TCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAE 189

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
            A    RVN ++PG+V T     +  +  +R        LNR      M      L SD 
Sbjct: 190 WASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLSDH 247

Query: 237 ASYITGETLVVAGGMA 252
           A+Y+TG    + GG  
Sbjct: 248 ATYMTGGEYFIDGGQL 263

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  197 bits (503), Expect = 3e-63
 Identities = 68/247 (27%), Positives = 106/247 (42%), Gaps = 10/247 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
              GK  ++T   +G+G   A +    GA VV++       ++     + LG        
Sbjct: 2   DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATARELGDAARYQHL 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+ E+  + ++    E++G +D  V NA ++     L         K+ EIN+    + 
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIG 117

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
           M+   P M    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN
Sbjct: 118 MKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVN 177

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN-MAAAIAFLASDDASYITGET 244
            V PG   T             +     T + R+G     +A A+  L SD +SY+TG  
Sbjct: 178 SVHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE 235

Query: 245 LVVAGGM 251
           L V GG 
Sbjct: 236 LAVDGGW 242

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  198 bits (505), Expect = 3e-63
 Identities = 70/252 (27%), Positives = 117/252 (46%), Gaps = 8/252 (3%)

Query: 5   NMAKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           +M   F   G+ AVVT +  GIG  +A      GA V+   R    V +  +++   G  
Sbjct: 22  SMTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDG-VKEVADEIADGGGS 80

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
              ++  +++ +   N+ +  +    R+DV V NA +    A   +       ++  +N+
Sbjct: 81  AEAVVADLADLEGAANVAE-ELAATRRVDVLVNNAGII-ARAPAEEVSLGRWREVLTVNL 138

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            ++ +L +     M       +V I+S+  +Q    +A Y  +K A++GLT+ALA+E A 
Sbjct: 139 DAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAG 198

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN +APG+V T    AL  +D     +  +    R  T  +M     FLASD ASY
Sbjct: 199 RGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASY 258

Query: 240 ITGETLVVAGGM 251
           + G+ L V GG 
Sbjct: 259 VHGQVLAVDGGW 270

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  196 bits (501), Expect = 8e-63
 Identities = 69/253 (27%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
              +GKVA+VT +++GIG  +A+RL  +GA V I    +++  ++ V ++++ G     I
Sbjct: 3   SMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62

Query: 67  ICHVSNEQHRKNLIDKTVEK------YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
             ++ +    + L      +        + D+ + NA + P A  + +T E   D++  +
Sbjct: 63  GANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAF-IEETTEQFFDRMVSV 121

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           N K+   ++Q A   ++  S ++ ISS A          Y +TK A+  +T  LA ++  
Sbjct: 122 NAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGA 181

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN + PGFV T     LL +  +++     +  NRLG   ++A   AFLAS D+ +
Sbjct: 182 RGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRW 241

Query: 240 ITGETLVVAGGMA 252
           +TG+ + V+GG  
Sbjct: 242 VTGQLIDVSGGSC 254

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  196 bits (500), Expect = 8e-63
 Identities = 66/251 (26%), Positives = 106/251 (42%), Gaps = 15/251 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVI--SSRKQKNVDKAVEKLKALGIEVIGIICH 69
           GKV +VT  ++GIG  + + L       V+   +R +  + K  EK    G     ++  
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGD 58

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           ++ +   K L++  V+ +G+ID  V NA V     ++ +   +   KL++IN  S + L+
Sbjct: 59  ITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 130 QDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVA 188
             A P ++K + +VVF+SS A     S+   YG +K AL      LA E     +   VA
Sbjct: 119 GIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANE-ERQVKAIAVA 177

Query: 189 PGFVPTHFAQALLGNDAV-------RKALEGKTLLNRLGTTGNMAAAIAFLASDD-ASYI 240
           PG V T     +  N           K   G    N+L  +   A   A LA       +
Sbjct: 178 PGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGV 237

Query: 241 TGETLVVAGGM 251
            G+ L      
Sbjct: 238 NGQYLSYNDPA 248

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  196 bits (500), Expect = 1e-62
 Identities = 58/249 (23%), Positives = 90/249 (36%), Gaps = 15/249 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
             A+VT      G+G A RL   G +V       K  D+                    +
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE------AFAETYPQLKPMS 55

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           EQ    LI+     YG++DV V N    P    + K          E        L+   
Sbjct: 56  EQEPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAV 115

Query: 133 APHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
           A  M  +K   ++FI+S   + P   ++ Y   +     L  AL+ E+      V  + P
Sbjct: 116 ASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGP 175

Query: 190 GFVPTHFAQALL------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            ++ +  +           N      ++  T L RLGT   +   +AFLAS    Y+TG+
Sbjct: 176 NYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ 235

Query: 244 TLVVAGGMA 252
              +AGG  
Sbjct: 236 VFWLAGGFP 244

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  196 bits (500), Expect = 1e-62
 Identities = 78/253 (30%), Positives = 115/253 (45%), Gaps = 9/253 (3%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEV 63
           +M    QG+  VVT  T+GIG G+A      GA+V ++ R   ++D  V  L +    +V
Sbjct: 4   SM-FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKV 62

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           IG+   VS+      L  + VE++G IDV   NA V P  A L       L+ ++ +NV 
Sbjct: 63  IGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVN 121

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP 180
            +   +Q     +       VV  SSI G        + YG TK A LG  +  A E+AP
Sbjct: 122 GTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAP 181

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN + PG + T         +    ++        LGT  ++    AFLA+ +A Y
Sbjct: 182 HKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGY 239

Query: 240 ITGETLVVAGGMA 252
           ITG+ + V GG  
Sbjct: 240 ITGQAIAVDGGQV 252

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  195 bits (498), Expect = 3e-62
 Identities = 68/257 (26%), Positives = 112/257 (43%), Gaps = 9/257 (3%)

Query: 2   EKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALG 60
           E +         V +VT  ++GIG  V      +G  V ++ +  ++  D  V  +   G
Sbjct: 16  ENLYFQSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG 75

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
            E + I   V N      +      ++GR+D  V NA +  Y   + +     ++++  +
Sbjct: 76  GEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRV 135

Query: 121 NVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQ-PPSAMAMYGVTKTALLGLTKAL 174
           NV  SIL   +A   M +     G ++V +SS+A      +    Y  +K A+   T  L
Sbjct: 136 NVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGL 195

Query: 175 AAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A E+A +  RVN V PG + T    +  G     + +     + R G    +A AI +L 
Sbjct: 196 AREVAAEGIRVNAVRPGIIETDLHAS-GGLPDRAREMAPSVPMQRAGMPEEVADAILYLL 254

Query: 234 SDDASYITGETLVVAGG 250
           S  ASY+TG  L V+GG
Sbjct: 255 SPSASYVTGSILNVSGG 271

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  194 bits (495), Expect = 4e-62
 Identities = 58/247 (23%), Positives = 110/247 (44%), Gaps = 19/247 (7%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---V 63
            +  +G+V +VT + +GIG   A      GASVV+  R + ++ +  +++K+ G     +
Sbjct: 9   PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLI 68

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           I +    +  Q  + L  +   ++GR+D  + NA++      L +  +    ++  +NV 
Sbjct: 69  IALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVN 128

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           ++ +L +   P +   + +S+ F SS  G +  +    YGV+K A  GL + LA E+   
Sbjct: 129 ATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGV 188

Query: 182 T--RVNCVAPGFVPTHF-AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           T  R N + PG   T   AQA    +                   ++     +L   D++
Sbjct: 189 TAVRANSINPGATRTGMRAQAYPDENP-----------LNNPAPEDIMPVYLYLMGPDST 237

Query: 239 YITGETL 245
            I G+ L
Sbjct: 238 GINGQAL 244

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  193 bits (493), Expect = 7e-62
 Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 15/244 (6%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A+VT  ++GIG  +AE L   G  V I+SR   N ++A + L A+ +        +  
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYRVAIASR---NPEEAAQSLGAVPLP-----TDLEK 54

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
           +  +  L+ + +E  G + V V  AAVN      L+       ++  +++  + LL Q A
Sbjct: 55  DDPKG-LVKRALEALGGLHVLVHAAAVN-VRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 133 APHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
           APHM       V+FI S+  +    P  +  Y   KTALLGLT+ALA E A    RVN +
Sbjct: 113 APHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLL 172

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
            PG+V T F   L  N  + + +  +  + R      +A   A L  D+A Y+TG+ + V
Sbjct: 173 CPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVAV 232

Query: 248 AGGM 251
            GG 
Sbjct: 233 DGGF 236

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  192 bits (490), Expect = 5e-61
 Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 27/263 (10%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEV 63
           MA    GKVA+VT + QGIG   AE L L+GA V +     +   +    L       + 
Sbjct: 1   MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKT 60

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           + I C V+++Q  ++   K V+ +GR+D+ V NA V           E   +K  +IN+ 
Sbjct: 61  LFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGV---------NNEKNWEKTLQINLV 111

Query: 124 SSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK--ALAA 176
           S I        +M K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171

Query: 177 EMAPDT-RVNCVAPGFVPTHFAQALLGND------AVRKALEGKTLLNRLGTTGNMAAAI 229
            +     R+N + PGFV T   +++   +        +  ++       +     +A  +
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGL 231

Query: 230 AFLASDDASYITGETLVVAGGMA 252
             L  DDA  + G  + +     
Sbjct: 232 ITLIEDDA--LNGAIMKITTSKG 252

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  192 bits (489), Expect = 6e-61
 Identities = 68/249 (27%), Positives = 110/249 (44%), Gaps = 22/249 (8%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
            R Q KV V+T ++QGIG G+          VV +SR  K          +   ++  + 
Sbjct: 24  MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK---------PSADPDIHTVA 74

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S  +    ++ + +E++GRID  V NA V   A   ++  +   D    +NV     
Sbjct: 75  GDISKPETADRIVREGIERFGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFH 133

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
           + Q AA  M  Q    +V I++    Q       A+  +TK  L  +T++LA E +    
Sbjct: 134 ITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN V+PG + T      +        L G   + R+G   ++  A+ +L  + A +ITG
Sbjct: 194 RVNAVSPGVIKTP-----MHPAETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFITG 246

Query: 243 ETLVVAGGM 251
           E L V GG 
Sbjct: 247 EILHVDGGQ 255

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  192 bits (489), Expect = 2e-60
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 22/262 (8%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGI 61
           +  +      +  +VT  T+GIG G+A      GA+V +++R  + +     +L +    
Sbjct: 32  ERKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAG 91

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWE 119
            VIG+   VS+     +     V+ +G +DV   NA + P   +  L       L ++ +
Sbjct: 92  NVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFP---EARLDTMTPEQLSEVLD 148

Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGY------QPPSAMAMYGVTKTALLGLT 171
           +NVK ++  +Q     +       V+  SSI G             + YG +K A LG  
Sbjct: 149 VNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGW-----SHYGASKAAQLGFM 203

Query: 172 KALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA 230
           +  A E+AP    VN + PG + T     +   +     +     +  LG+  ++    A
Sbjct: 204 RTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAA 261

Query: 231 FLASDDASYITGETLVVAGGMA 252
           FLA+D+A YITG+ +VV GG  
Sbjct: 262 FLATDEAGYITGQAIVVDGGQV 283

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  190 bits (486), Expect = 3e-60
 Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 10/255 (3%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           K N     + KVA+VT + +GIG  +A+ L    + V+  SR QK+ D  V+++K+ G E
Sbjct: 35  KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 94

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEI 120
             G    VS ++    +I+K + ++  +D+ V NA +     D   L+ K    + +   
Sbjct: 95  SSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGIT---RDNLFLRMKNDEWEDVLRT 151

Query: 121 NVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           N+ S   + Q  +  M   +   ++ ISSI G       A Y  +K  ++G TK+LA E+
Sbjct: 152 NLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKEL 211

Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           A  +  VN +APGF+ +     +  ++ ++K +       R+GT   +A    FL+SD +
Sbjct: 212 ASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKS 269

Query: 238 SYITGETLVVAGGMA 252
            YI G   V+ GG++
Sbjct: 270 GYINGRVFVIDGGLS 284

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  189 bits (482), Expect = 4e-60
 Identities = 72/249 (28%), Positives = 119/249 (47%), Gaps = 9/249 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +R  GK A+VT + QGIG  +A RL  +GA+V++S     N + A     ++G +   I 
Sbjct: 2   ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDI---NAEGAKAAAASIGKKARAIA 58

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+    K L  +     G ID+ V NA++ P+ A           K+ ++N+  + +
Sbjct: 59  ADISDPGSVKALFAEIQALTGGIDILVNNASIVPFVA-WDDVDLDHWRKIIDVNLTGTFI 117

Query: 128 LMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + +     M    K   V+ I+S   +     MA Y   K  ++G T+ALA E+      
Sbjct: 118 VTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNIT 177

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
            N V PG + +   +A   ++     +E    +   G   ++A  ++FLASDDA +ITG+
Sbjct: 178 ANAVTPGLIESDGVKAS-PHNEAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITGQ 236

Query: 244 TLVVAGGMA 252
           TL V  GM 
Sbjct: 237 TLNVDAGMV 245

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  190 bits (484), Expect = 5e-60
 Identities = 56/258 (21%), Positives = 101/258 (39%), Gaps = 25/258 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-------NVDKAVEKLKALGI 61
              GK   +T +++GIGL +A R   +GA+V I+++           +  A   + A G 
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGG 62

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
           + + + C +  E   +  +  TV+ +G ID+ V NA+        L T     D + ++N
Sbjct: 63  QGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL-RGTLDTPMKRFDLMQQVN 121

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAE 177
            + S +  Q   PH+       ++ ++      P        Y + K  +  +T  LAAE
Sbjct: 122 ARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAE 181

Query: 178 MAPDT-RVNCVAPG-FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
             P    +N + P   + T     L G D                    MA A   + + 
Sbjct: 182 FGPQGVAINALWPRTVIATDAINMLPGVD-----------AAACRRPEIMADAAHAVLTR 230

Query: 236 DASYITGETLVVAGGMAS 253
           +A+   G+ L+    +A 
Sbjct: 231 EAAGFHGQFLIDDEVLAQ 248

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  188 bits (479), Expect = 2e-59
 Identities = 75/242 (30%), Positives = 113/242 (46%), Gaps = 13/242 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
               G+VAVVT +++GIG  +A +LG  GA VV+++R  + +     ++ A G E     
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C +S+           +  +GR DV V NA V  +   L   K +  D L  +N+K+  L
Sbjct: 85  CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYL 144

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           L++  AP M   K   ++ ISS+AG  P +  A Y  +K  L GL  + A E+     RV
Sbjct: 145 LLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRV 204

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           + VAPG V T F   L    +   A+E            ++A  +A LA+        E 
Sbjct: 205 SLVAPGSVRTEFGVGLSAKKSALGAIEPD----------DIADVVALLATQADQSFISEV 254

Query: 245 LV 246
           LV
Sbjct: 255 LV 256

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  188 bits (480), Expect = 4e-59
 Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 29/279 (10%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI------------SSRKQKNVDKA 52
           +MA + +GKVA +T + +G G   A  L  EGA ++                   ++ + 
Sbjct: 21  SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAET 80

Query: 53  VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES 112
           V +++ALG  +I     V +    +  +D  V + GR+D+ + NAA+      L +    
Sbjct: 81  VRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPK 140

Query: 113 VLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG 169
               + ++N+  + +  + A PH+   ++G S+VF SSI G +    +  Y  +K  L G
Sbjct: 141 TWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHG 200

Query: 170 LTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN----------- 217
           L + +A E+ P   RVN V P  V T            R  LE  T+ +           
Sbjct: 201 LMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL 260

Query: 218 --RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR 254
                   +++ AI FL SDDA YITG +L V GG   +
Sbjct: 261 PIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK 299

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  187 bits (478), Expect = 4e-59
 Identities = 74/273 (27%), Positives = 114/273 (41%), Gaps = 29/273 (10%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKAL-GIE 62
              +  +   AV+T   + IG  +A RL  +G  VV+     +    + V +L A     
Sbjct: 4   TSHEASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGS 63

Query: 63  VIGIICHVSNE----QHRKNLIDKTVEKYGRIDVFVLNAAV----------NPYAADLLK 108
            +     +S         +++ID +   +GR DV V NA+           +   A   K
Sbjct: 64  AVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAK 123

Query: 109 TKESVLDKLWEINVKSSILLMQDAAPHM-------QKGSSVVFISSIAGYQPPSAMAMYG 161
             ++ + +L+  N  + + L++  A           +  SVV +       P     +Y 
Sbjct: 124 PIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYT 183

Query: 162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL- 219
           + K AL GLT+A A E+AP   RVN VAPG      A         ++    K  L +  
Sbjct: 184 MAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSE 239

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMA 252
            +   +A AIAFL S DA YITG TL V GG+ 
Sbjct: 240 ASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  187 bits (477), Expect = 4e-59
 Identities = 80/256 (31%), Positives = 131/256 (51%), Gaps = 10/256 (3%)

Query: 2   EKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI 61
              +M K    +VA+VT +++GIG  +A  L   GA V+ ++  +   +      K  G+
Sbjct: 18  GPGSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL 77

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWE 119
           E  G + +V++      L++ T++++G ++V V NA +     D   ++ K+   D + +
Sbjct: 78  EGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGIT---QDQLAMRMKDDEWDAVID 134

Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
            N+K+   L +     M   +G  +V I+S+ G         Y   K  + G+T+ALA E
Sbjct: 135 TNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALARE 194

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           +      VNCVAPGF+ T   + L      + AL+ +  L RLG+  ++A A+AFLAS  
Sbjct: 195 IGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQ 252

Query: 237 ASYITGETLVVAGGMA 252
           A YITG TL V GGM 
Sbjct: 253 AGYITGTTLHVNGGMF 268

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  187 bits (477), Expect = 5e-59
 Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 26/272 (9%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI-------------SSRKQKNVDK 51
           +MA + +G+VA +T + +G G   A R+  EGA ++                    ++ +
Sbjct: 4   SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSE 63

Query: 52  AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE 111
            V  ++A    ++  +    +    + ++D  V   GR+D+ V NA V    A       
Sbjct: 64  TVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQA-WDDITP 122

Query: 112 SVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALL 168
                + +INV  +   +   AP + +   G S++ ISS AG +    M  Y  +K A+ 
Sbjct: 123 EDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVT 182

Query: 169 GLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKT--------LLNRL 219
           GL +A AAE+   + RVN V PG V T      +     +               L + +
Sbjct: 183 GLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWV 242

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
               ++A  + +LASD++  +T   + V  G 
Sbjct: 243 AEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  186 bits (475), Expect = 5e-59
 Identities = 63/257 (24%), Positives = 114/257 (44%), Gaps = 15/257 (5%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GK A+VT ST GIGLG+A+ L   GA++V++     +   A+ ++   G++ +     
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFG--DPAPALAEIARHGVKAVHHPAD 59

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           +S+    + L      ++G +D+ V NA +  + A + +      DK+  +N+ +     
Sbjct: 60  LSDVAQIEALFALAEREFGGVDILVNNAGIQ-HVAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           + A P M  +    ++ I+S+ G    +  A Y   K  ++GLTK +  E A      N 
Sbjct: 119 RLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA 178

Query: 187 VAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           + PG+V T   Q  + +          A    L  K       T  ++   + FL S+  
Sbjct: 179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEAG 238

Query: 238 SYITGETLVVAGGMASR 254
           S + G    V GG  ++
Sbjct: 239 SQVRGAAWNVDGGWLAQ 255

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  186 bits (475), Expect = 6e-59
 Identities = 59/255 (23%), Positives = 99/255 (38%), Gaps = 22/255 (8%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            F GK   VT + +GIG   A      GA V    +                      + 
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQA----------FTQEQYPFATEVM 53

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++      +  + + +  R+D  V  A +        +  +    + + +NV  +  L
Sbjct: 54  DVADAAQVAQVCQRLLAETERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q        Q+G ++V ++S A + P   M+ YG +K AL  L  ++  E+A    R N
Sbjct: 113 FQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCN 172

Query: 186 CVAPGFVPTHFAQALLGN--------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
            V+PG   T   + L  +            +  +    L ++     +A  I FLASD A
Sbjct: 173 VVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDLA 232

Query: 238 SYITGETLVVAGGMA 252
           S+IT + +VV GG  
Sbjct: 233 SHITLQDIVVDGGST 247

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  186 bits (474), Expect = 7e-59
 Identities = 73/251 (29%), Positives = 122/251 (48%), Gaps = 20/251 (7%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M    + K  +V A+++GIG  VA+ L  EGA V I +R +       E LK  G   +
Sbjct: 12  HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSGHRYV 64

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
             +C +         +D   EK   +D+ VLNA     A    +       +  +    +
Sbjct: 65  --VCDLRK------DLDLLFEKVKEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLN 115

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
            I ++++  P M  +    +V I+S +   P   +      + AL G  K L+ E+AP  
Sbjct: 116 MIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYG 175

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
             VNCVAPG+  T   + LL ++  +K +E +  + R+     +A+ +AFL S+ ASY+T
Sbjct: 176 ITVNCVAPGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLT 234

Query: 242 GETLVVAGGMA 252
           G+T+VV GG++
Sbjct: 235 GQTIVVDGGLS 245

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  187 bits (477), Expect = 7e-59
 Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 10/250 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGII 67
             +G++A+VT    G+G G+A+ L  EG SVVI+ R+   +D A  ++    G  V  ++
Sbjct: 30  SGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVV 89

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C V +      L      ++ R+D+ V NA  N     L +      + +   N+  + L
Sbjct: 90  CDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFL 149

Query: 128 LMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
             Q A   M+     G  ++   SI+   P    A Y  TK A+ GLTK+ A +    D 
Sbjct: 150 CTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDI 209

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYIT 241
               +  G   T     +           G+          ++A A+ ++AS   ++ + 
Sbjct: 210 ACGQIDIGNAATDMTARMSTGV---LQANGEVAAEPTIPIEHIAEAVVYMASLPLSANVL 266

Query: 242 GETLVVAGGM 251
             T++     
Sbjct: 267 TMTVMATRMP 276

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  187 bits (476), Expect = 1e-58
 Identities = 53/256 (20%), Positives = 104/256 (40%), Gaps = 21/256 (8%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK-------AVEKLKALGI 61
             +GK   ++  ++GIGL +A+R+  +GA+V + ++  +   K       A ++++  G 
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEIN 121
           + + I+  + +       + KTVE++G ID+ V NA+       + +      D +  I 
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINL-GSIEEVPLKRFDLMNGIQ 124

Query: 122 VKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEM 178
           V+ +  + Q   PHM  +    ++ +S     +P       Y + K  +      +A E+
Sbjct: 125 VRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEEL 184

Query: 179 APDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
                  N + P               AV+  L G   + R       A A   + +  +
Sbjct: 185 RDAGIASNTLWPRTTVA--------TAAVQNLLGGDEAMARSRKPEVYADAAYVVLNKPS 236

Query: 238 SYITGETLVVAGGMAS 253
           SY TG TL+    +  
Sbjct: 237 SY-TGNTLLCEDVLLE 251

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  186 bits (474), Expect = 1e-58
 Identities = 61/264 (23%), Positives = 114/264 (43%), Gaps = 16/264 (6%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV--EKLKALGIEV 63
             +    K AV+T ST GIGL +A  L   GA++V++     +  + V  E        V
Sbjct: 19  YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTV 78

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           +     ++      +++    +++G  D+ V NA V  +   +        D++  +N+ 
Sbjct: 79  LHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQ-FVEKIEDFPVEQWDRIIAVNLS 137

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           SS   ++ A P M  +    ++ I+S  G       + Y   K  ++GLTK +A E+A  
Sbjct: 138 SSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAES 197

Query: 182 -TRVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIA 230
              VN + PG+V T   +  + +            + + +       +  T   +A+   
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLAL 257

Query: 231 FLASDDASYITGETLVVAGGMASR 254
           +LA DDA+ ITG  + + GG  ++
Sbjct: 258 YLAGDDAAQITGTHVSMDGGWTAQ 281

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  185 bits (472), Expect = 2e-58
 Identities = 61/253 (24%), Positives = 106/253 (41%), Gaps = 15/253 (5%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
            G+V VVT +++GIG G+A +L   GA+V I+ R    +    ++ ++LG + + ++C  
Sbjct: 4   NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDS 63

Query: 71  SNEQHRKNLIDKT-VEKYGRIDVFVLNAAVNPYAAD------LLKTKESVLDKLWEINVK 123
           S E   ++L ++   E+ GR+DV V NA                +T  S+ D +  + ++
Sbjct: 64  SQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLR 123

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
                    A  M       +V ISS    Q       YGV K A   L    A E+   
Sbjct: 124 GHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELRRH 182

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRK---ALEGKTLLNRLGTTGNMAAAIAFLASD-D 236
                 + PG V T   +  +  + V +     + K+  +   TT      +  LA+D +
Sbjct: 183 GVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATDPN 242

Query: 237 ASYITGETLVVAG 249
              ++G+ L    
Sbjct: 243 ILSLSGKVLPSCD 255

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  185 bits (473), Expect = 2e-58
 Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 19/268 (7%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           + + +       +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G
Sbjct: 11  VPRGSHMATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAG 70

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLW 118
           +E  G  C V +    + L+   VE+YG +DV V NA            +  + +   + 
Sbjct: 71  VEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRP---GGGATAELADELWLDVV 127

Query: 119 EINVKSSILLMQDAAPHM----QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
           E N+     + +          +    +V I+S  G Q     A Y  +K  ++G TKAL
Sbjct: 128 ETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKAL 187

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAQAL---------LGNDAVRKALEGKTLLNRLGTTGN 224
             E+A     VN V PGFV T  A ++         +  +     +  +  + R      
Sbjct: 188 GLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSE 247

Query: 225 MAAAIAFLASDDASYITGETLVVAGGMA 252
           +A  +A+L    A+ +T + L V GG+ 
Sbjct: 248 VAEMVAYLIGPGAAAVTAQALNVCGGLG 275

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  185 bits (471), Expect = 4e-58
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 15/260 (5%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
           +   + + A VT  + GIGL VA  L   G +V   +R  KNV  AV+ L+A G +V G 
Sbjct: 19  SHMSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS 78

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
            C V++       +   VE++G I + V +A  N          +++   + + N+    
Sbjct: 79  SCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGGGE-TADLDDALWADVLDTNLTGVF 137

Query: 127 LLMQDAAPH---MQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-D 181
            + ++        + G   +V I+S  G Q     A Y  +K  ++G TK++  E+A   
Sbjct: 138 RVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197

Query: 182 TRVNCVAPGFVPTHFAQAL---------LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFL 232
             VN V PG+V T  A+ +         +    V +    K  L R  T   +A  + +L
Sbjct: 198 ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYL 257

Query: 233 ASDDASYITGETLVVAGGMA 252
            +D A+ IT + L V GG+ 
Sbjct: 258 VTDAAASITAQALNVCGGLG 277

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  185 bits (472), Expect = 4e-58
 Identities = 72/283 (25%), Positives = 114/283 (40%), Gaps = 33/283 (11%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI----------------SSRKQKN 48
           +M  R +GKVA VT + +G G   A RL  EGA ++                  +   ++
Sbjct: 4   SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPED 63

Query: 49  VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK 108
           + +  + +K     ++     V +    K  +D  VE+ GR+D+ V NA +      L K
Sbjct: 64  LAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDK 123

Query: 109 TKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKT 165
           T E    ++ +IN+      ++   PHM     G S++  SS+ G +       Y   K 
Sbjct: 124 TSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKH 183

Query: 166 ALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKT---------- 214
            ++GL +A   E+     RVN V P  V T            R  LE             
Sbjct: 184 GVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM 243

Query: 215 ---LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR 254
              L        +++ A+ F ASD+A YITG TL +  G   +
Sbjct: 244 FHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 286

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  182 bits (465), Expect = 2e-57
 Identities = 85/250 (34%), Positives = 135/250 (54%), Gaps = 11/250 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII 67
           + +GK A+VT S++G+G  +A +LG  GA++V++ S    ++D   E+ KA GI V+   
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSS 125
             V N +  +N++   ++ +GRID+ V NA +     D  +LK  E   D +   N+KS+
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGIT---RDTLMLKMSEKDWDDVLNTNLKSA 118

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
            L  +  +  M  QK   ++ I+SIAG    +  A Y  +K  L+G TK++A E A    
Sbjct: 119 YLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
             N VAPG + T     L   D V++       L R GT   +A  + FLASDD++YITG
Sbjct: 179 YCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITG 236

Query: 243 ETLVVAGGMA 252
           + + + GG+ 
Sbjct: 237 QVINIDGGLV 246

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  182 bits (464), Expect = 2e-57
 Identities = 74/248 (29%), Positives = 127/248 (51%), Gaps = 10/248 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
              KVA+VT +++GIG  VA  L  +GA+VV ++  Q + +K    +K  G +  G++ +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLN 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSIL 127
           +S+ +  +N   +   +   ID+ V NA +     D  +++  E     +   N+ S   
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGIT---RDNLMMRMSEDEWQSVINTNLSSIFR 119

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + ++    M  ++   ++ I S+ G         Y   K  ++G +K+LA E+A  +  V
Sbjct: 120 MSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITV 179

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N VAPGF+ T     L   D  +  +  K    ++G   ++AAA+AFLAS++A YITG+T
Sbjct: 180 NVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQT 237

Query: 245 LVVAGGMA 252
           L V GGM 
Sbjct: 238 LHVNGGMY 245

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  183 bits (466), Expect = 3e-57
 Identities = 63/285 (22%), Positives = 112/285 (39%), Gaps = 40/285 (14%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI------------SSRKQKNVDKAVEK 55
            R Q KV +VT   +G G   A +L  EGA +++                 +++++A  +
Sbjct: 6   GRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLE 65

Query: 56  LKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
           ++  G +       V +       +   V ++G++DV V NA + P  A L         
Sbjct: 66  VEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHL---PVQAFA 122

Query: 116 KLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG-----------YQPPSAMAMYGVTK 164
             ++++    I  +  A P++  G+S++   S+AG                  A Y   K
Sbjct: 123 DAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAK 182

Query: 165 TALLGLTKALAAEMAPDT-RVNCVAPGFVPT---------HFAQALLGNDAVRKALEGKT 214
             +   T  LAA++AP + R N + P  V T            +  L   +   AL    
Sbjct: 183 QLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLAFP 242

Query: 215 LLNRLGTTGN----MAAAIAFLASDDASYITGETLVVAGGMASRL 255
            +  + T       ++ A+ FLASD++ Y+TG    V  G   + 
Sbjct: 243 AMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF 287

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  182 bits (464), Expect = 3e-57
 Identities = 58/255 (22%), Positives = 110/255 (43%), Gaps = 11/255 (4%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVI 64
           M+     + A++TA T+G+G  V E+L  +G SV ++       ++   E  K +   + 
Sbjct: 1   MSLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQ 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
            +   V+ ++    ++++ +  +G+ID  + NA          L+  +E   +++ + N+
Sbjct: 61  FVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG-PYVFERKKLVDYEEDEWNEMIQGNL 119

Query: 123 KSSILLMQDAAPHM--QKGSSVVFIS--SIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
            +   L++   P M  Q    ++                + +   K  L+ LTK +A E 
Sbjct: 120 TAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEE 179

Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           A      N V PG +     +A       R+  E  T + R GT  ++A  I+FL  DD+
Sbjct: 180 AEYGITANMVCPGDIIGEMKEAT--IQEARQLKEHNTPIGRSGTGEDIARTISFLCEDDS 237

Query: 238 SYITGETLVVAGGMA 252
             ITG  + V G + 
Sbjct: 238 DMITGTIIEVTGAVD 252

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  181 bits (463), Expect = 3e-57
 Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 24/253 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + +A E + A  +       
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVV-----M 56

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSI 126
            V++    +    + +   GR+D  V  A +     D    K      + +  +N+  S 
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGIT---RDNFHWKMPLEDWELVLRVNLTGSF 113

Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGY----QPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           L+ + A+  M  +   S+V  +S        Q     A Y  +   ++GLT+ LA E+  
Sbjct: 114 LVAKAASEAMREKNPGSIVLTASRVYLGNLGQ-----ANYAASMAGVVGLTRTLALELGR 168

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              RVN +APGF+ T     +   + VR+     T L R G    +A A  FL SD++S+
Sbjct: 169 WGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSF 226

Query: 240 ITGETLVVAGGMA 252
           ITG+ L V GG  
Sbjct: 227 ITGQVLFVDGGRT 239

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  182 bits (464), Expect = 7e-57
 Identities = 70/271 (25%), Positives = 107/271 (39%), Gaps = 29/271 (10%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK--LKALGIEVI 64
               +   AVVT + + IG  +A +L   G  VVI          ++     K      +
Sbjct: 18  GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAV 77

Query: 65  GIICHVSNEQHR----KNLIDKTVEKYGRIDVFVLNAAV---------NPYAADLLKTKE 111
                ++N        + +I+     +GR DV V NA+          +       KT E
Sbjct: 78  VCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVE 137

Query: 112 SVLDKLWEINVKSSILLMQDAAPHM--------QKGSSVVFISSIAGYQPPSAMAMYGVT 163
           + + +L   N  +  LL    A               S+V +      QP  A ++Y + 
Sbjct: 138 TQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMG 197

Query: 164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL-GT 221
           K AL+GLT++ A E+AP   RVN VAPG      A      +  +     K  L R   +
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVAM----GEEEKDKWRRKVPLGRREAS 253

Query: 222 TGNMAAAIAFLASDDASYITGETLVVAGGMA 252
              +A A+ FL S  A YITG  + V GG++
Sbjct: 254 AEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  180 bits (460), Expect = 1e-56
 Identities = 80/249 (32%), Positives = 137/249 (55%), Gaps = 11/249 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIIC 68
            +GKVA+VT +++GIG  +A  L  +GA+VV++ +  ++  ++ V+++K LG + I +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSI 126
            V+N +   N++ +TV+ +G++D+ V NA V     D  L++ KE   D +   N+K   
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGVT---KDNLLMRMKEEEWDTVINTNLKGVF 118

Query: 127 LLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
           L  +  +  M  Q+   +V I+S+ G       A Y   K  ++GLTK  A E+A  +  
Sbjct: 119 LCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE 243
           VN +APGF+ T     L  ++ ++  +       + G   ++A A+ F ASD + YITG+
Sbjct: 179 VNAIAPGFIATDMTDVL--DENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQ 236

Query: 244 TLVVAGGMA 252
           TL V GGM 
Sbjct: 237 TLNVDGGMV 245

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  179 bits (458), Expect = 2e-56
 Identities = 78/252 (30%), Positives = 134/252 (53%), Gaps = 11/252 (4%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVI 64
           M  + QGKV++VT ST+GIG  +AE+L   G++V+I+    +      E++    G++  
Sbjct: 1   MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAH 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
           G+  ++ +E+      ++       ID+ V NA +     D   L+      +++ ++N+
Sbjct: 61  GVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGIT---RDKLFLRMSLLDWEEVLKVNL 117

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
             + L+ Q++   M  Q+   +V ISS+ G+        Y  TK  L+G TK+LA E+AP
Sbjct: 118 TGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAP 177

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            +  VN VAPGF+ T     L  ++ +++  + +  L R G+   +A  + FL S+ ASY
Sbjct: 178 RNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASY 235

Query: 240 ITGETLVVAGGM 251
           ITGE + V GGM
Sbjct: 236 ITGEVIHVNGGM 247

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  180 bits (458), Expect = 2e-56
 Identities = 76/260 (29%), Positives = 116/260 (44%), Gaps = 16/260 (6%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV--EKLKALGIEVIGII 67
            +GKVAVVT ST GIGLG+A  L  +GA +V++        + V        G++V+   
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S  +  + L+D  V + GRID+ V NA +  + A +        D +  +N+ +   
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQ-HTALIEDFPTEKWDAILALNLSAVFH 120

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
               A PHM  Q    ++ I+S  G    +  + Y   K  ++G TK  A E A      
Sbjct: 121 GTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA 180

Query: 185 NCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
           N + PG+V T   +  +             A R+ L  K    +  T   +     FLAS
Sbjct: 181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS 240

Query: 235 DDASYITGETLVVAGGMASR 254
           D A+ ITG T+ V GG  +R
Sbjct: 241 DAAAQITGTTVSVDGGWTAR 260

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  179 bits (457), Expect = 2e-56
 Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 24/242 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
               K  +V   +  +G  V +    +  + +    ++                      
Sbjct: 19  SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFREN------------PNADHSFTI 66

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
             S E+  K++I+K   K  ++D FV  A                +  + ++N+ S+   
Sbjct: 67  KDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFAS 126

Query: 129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT---RVN 185
               A  + +G   V   + A     S M  YG TK A   + K LA+E           
Sbjct: 127 AHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSL 186

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            + P  + T   +  + +          T L+ +           +  + D+    G  +
Sbjct: 187 GILPVTLDTPTNRKYMSDANFDDW----TPLSEVA-----EKLFEWSTNSDSRPTNGSLV 237

Query: 246 VV 247
             
Sbjct: 238 KF 239

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  179 bits (456), Expect = 4e-56
 Identities = 84/248 (33%), Positives = 139/248 (56%), Gaps = 11/248 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
             K A+VT +++GIG  +A +L  EG +V ++ +  ++  +  VE++KA G++   I  +
Sbjct: 3   MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQAN 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSIL 127
           V++    K +I + V ++G +DV V NA +     D  L++ KE   D + + N+K    
Sbjct: 63  VADADEVKAMIKEVVSQFGSLDVLVNNAGIT---RDNLLMRMKEQEWDDVIDTNLKGVFN 119

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
            +Q A P M  Q+  +++ +SS+ G       A Y  TK  ++GLTK+ A E+A     V
Sbjct: 120 CIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITV 179

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N VAPGF+ +    AL  +D +++ +  +  L R G   ++A  +AFLASD A YITG+T
Sbjct: 180 NAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQT 237

Query: 245 LVVAGGMA 252
           + V GGM 
Sbjct: 238 IHVNGGMY 245

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  179 bits (456), Expect = 4e-56
 Identities = 82/248 (33%), Positives = 130/248 (52%), Gaps = 13/248 (5%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
            +GKVA+VT +++GIG  +AE L   GA V+ ++    +   A      LG    G+  +
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAKVIGTAT---SESGAQAISDYLGDNGKGMALN 63

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSIL 127
           V+N +  + ++    +++G +D+ V NA +     D  L++ KE     + E N+ S   
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGIT---RDNLLMRMKEEEWSDIMETNLTSIFR 120

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           L +     M  ++   ++ + S+ G    +  A Y   K  ++G TK++A E+A     V
Sbjct: 121 LSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 180

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N VAPGF+ T   +AL  ND  R A   +    RLG    +A+A+AFLAS +A+YITGET
Sbjct: 181 NTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGET 238

Query: 245 LVVAGGMA 252
           L V GGM 
Sbjct: 239 LHVNGGMY 246

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  178 bits (455), Expect = 1e-55
 Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 13/249 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           +   K+A+VT +  G+G  VA  L   G  V ++ R    +D   E    +G + + +  
Sbjct: 25  KTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGR---RLDALQETAAEIGDDALCVPT 81

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++    + L   TVEK+GR+DV   NA     A  +     +   ++ + N+    L 
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLC 141

Query: 129 MQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTR 183
            Q+A   M+     G  ++   SI+   P    A Y  TK A+ GLTK+ + +    D  
Sbjct: 142 TQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIA 201

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYITG 242
              +  G   T  AQ +          +    +  +    ++A+A+ ++AS    + +  
Sbjct: 202 CGQIDIGNADTPMAQKMKAGV---PQADLSIKVEPVMDVAHVASAVVYMASLPLDANVQF 258

Query: 243 ETLVVAGGM 251
            T ++A  M
Sbjct: 259 MT-IMATKM 266

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  178 bits (454), Expect = 1e-55
 Identities = 74/253 (29%), Positives = 127/253 (50%), Gaps = 14/253 (5%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M  +  G+ A+VT +T GIG  +A     +GA V +        DK  E    LG +V 
Sbjct: 21  SM-FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGT---REDKLKEIAADLGKDVF 76

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
               ++S+ +  K L +    +   ID+ V NA +     D   ++ ++   D +  +N+
Sbjct: 77  VFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGIT---RDGLFVRMQDQDWDDVLAVNL 133

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            ++  L ++    M  ++   ++ I+SI G         Y   K  L+G +KALA E+A 
Sbjct: 134 TAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIAS 193

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
            +  VNC+APGF+ +     L  N+  ++A+     + R+G    +A A  +LASD+A+Y
Sbjct: 194 RNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAY 251

Query: 240 ITGETLVVAGGMA 252
           +TG+TL + GGMA
Sbjct: 252 LTGQTLHINGGMA 264

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  177 bits (451), Expect = 2e-55
 Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 20/257 (7%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKAL--GI 61
           A      V V+T +++G G  +A +L      G+ +++S+R +  + +  E+L A    +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGIICHVSNEQHRKNLIDKTVEKYG----RIDVFVLNAAV--NPYAADLLKTKESVLD 115
           +V+     +  E   + L+    E       +  + + NAA   +     L     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT 171
             W +N+ S + L        Q       +VV ISS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAQALLGND---AVRKALEGKTLLNRLGTTGNMAAA 228
           + LAAE  P  RV   APG +     Q          +R  L+       L   G  A  
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 229 IAFLASDDASYITGETL 245
           +  L   D ++ +G  +
Sbjct: 240 LLGLLQKD-TFQSGAHV 255

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  177 bits (452), Expect = 4e-55
 Identities = 63/267 (23%), Positives = 111/267 (41%), Gaps = 25/267 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI-------------SSRKQKNVDKAVEK 55
             QG+VA +T + +G G   A RL  EGA ++              +    +++D+    
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARL 71

Query: 56  LKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
           ++  G + +  +  V ++   + L+   +E++GR+DV V NA V  +   + +  +   D
Sbjct: 72  VEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWG-RVWELTDEQWD 130

Query: 116 KLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK 172
            +  +N+  +   ++   P M +   G S+V +SS AG +       Y  +K  L  LT 
Sbjct: 131 TVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTN 190

Query: 173 ALAAEMAPDT-RVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKTLLNRLGTTGN 224
            LA E+     RVN + P  V T   +              V          N   T   
Sbjct: 191 TLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTADE 250

Query: 225 MAAAIAFLASDDASYITGETLVVAGGM 251
           +A  +A+LA D +  +TG  + V  G 
Sbjct: 251 VADVVAWLAGDGSGTLTGTQIPVDKGA 277

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  176 bits (450), Expect = 5e-55
 Identities = 76/266 (28%), Positives = 117/266 (43%), Gaps = 29/266 (10%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV-- 63
           M  R +  +A+VT +  GIG  V+ RL  EGA+V      +    + V  L   G +   
Sbjct: 1   MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGP 60

Query: 64  -----IGIICHVSNEQHRKNLIDKTVEKYGRI-DVFVLNAAVNPYAAD--LLKTKESVLD 115
                      VS  +  + L+++    + R   V V  A +     D  LL   E   D
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGIT---QDEFLLHMSEDDWD 117

Query: 116 KLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGY-----QPPSAMAMYGVTKTAL 167
           K+  +N+K + L+ Q AA  +       S++ ISSI G      Q       Y  +K  +
Sbjct: 118 KVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQ-----TNYAASKAGV 172

Query: 168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMA 226
           +GLT+  A E+     R N V PGF+ T   Q +     V   +     +  LG   ++A
Sbjct: 173 IGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV--PQKVVDKITEMIPMGHLGDPEDVA 230

Query: 227 AAIAFLASDDASYITGETLVVAGGMA 252
             +AFLAS+D+ YITG ++ V GG+ 
Sbjct: 231 DVVAFLASEDSGYITGTSVEVTGGLF 256

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  174 bits (444), Expect = 5e-54
 Identities = 63/278 (22%), Positives = 110/278 (39%), Gaps = 33/278 (11%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI------------SSRKQKNVDKA 52
           +      GKVA +T + +G G   A RL  +GA ++                  + +   
Sbjct: 6   SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAAT 65

Query: 53  VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKES 112
           V+ ++ +G  ++     V + +     +   +++ GR+D+ V NA + P     +   + 
Sbjct: 66  VKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAP-----MSAGDD 120

Query: 113 VLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAG----YQPPSAMAMYGVTKT 165
               + ++N+      ++ A P + K   G S+V ISS AG             Y   K 
Sbjct: 121 GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKH 180

Query: 166 ALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN 224
            ++GL +  A  +A    RVN + P  V T         + + K          +G    
Sbjct: 181 GVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP 240

Query: 225 M--------AAAIAFLASDDASYITGETLVVAGGMASR 254
           +        A A+A+L SD A YITG TL V  G  ++
Sbjct: 241 VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK 278

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  174 bits (444), Expect = 6e-54
 Identities = 69/288 (23%), Positives = 104/288 (36%), Gaps = 48/288 (16%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKAL-GIEVIG 65
                 VA+VT + + +G  +AE L  EG +V +   R     +     L A      I 
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 66  IICHVSNEQHR-----------------KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK 108
           +   +SN                       L+      +GR DV V NA+   Y   LL+
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 123

Query: 109 TKE--------------SVLDKLWEINVKSSILLMQDAAPHM--------QKGSSVVFIS 146
             E              +    L+  N  +   L++  A  +            S++ + 
Sbjct: 124 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 183

Query: 147 SIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA 205
                QP     +Y + K AL GLT++ A E+AP   RVN V PG              A
Sbjct: 184 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----PPA 239

Query: 206 VRKALEGKT-LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMA 252
           V +    K  L  R  +   ++  + FL S  A YITG  + V GG +
Sbjct: 240 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 287

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  173 bits (441), Expect = 6e-54
 Identities = 75/247 (30%), Positives = 125/247 (50%), Gaps = 12/247 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            V VVT +++GIG  +A  LG  G  V+++ +R  K  ++  ++++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSILLM 129
            E   + ++   ++ +G IDV V NA +     D  L++ K+S  D++ ++N+    L  
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGIT---RDTLLIRMKKSQWDEVIDLNLTGVFLCT 118

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNC 186
           Q A   M  ++   ++ I+S+ G       A Y   K  ++G +K  A E A  +  VN 
Sbjct: 119 QAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA-SDDASYITGETL 245
           V PGF+ +     L   + + K + G   L R G   N+A  + FLA S  ASYITG+  
Sbjct: 179 VCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAF 236

Query: 246 VVAGGMA 252
            + GG+A
Sbjct: 237 TIDGGIA 243

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  173 bits (440), Expect = 7e-54
 Identities = 31/248 (12%), Positives = 71/248 (28%), Gaps = 21/248 (8%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           MA   + +  +V      +G    +        V         +D    +  +  + V  
Sbjct: 1   MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVAS-------IDVVENEEASASVIVKM 53

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
                         + K +    ++D  +  A          K+     D +W+ ++ +S
Sbjct: 54  TDSFTEQADQVTAEVGK-LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTS 112

Query: 126 ILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +    A  H+++G  +    + A       M  YG+ K A+  L ++LA + +      
Sbjct: 113 TISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
               V P  + T   +  +                       +        + +    +G
Sbjct: 173 AAIAVLPVTLDTPMNRKSMPEADFS----------SWTPLEFLVETFHDWITGNKRPNSG 222

Query: 243 ETLVVAGG 250
             + V   
Sbjct: 223 SLIQVVTT 230

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  173 bits (440), Expect = 1e-53
 Identities = 43/245 (17%), Positives = 91/245 (37%), Gaps = 9/245 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M+   +     V  +   IG  +A++   EG +V    R  + +   V +++A G  ++ 
Sbjct: 1   MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVA 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
                 NE      ++   + +  ++V + N   N     +L+T + V  K+WE+   + 
Sbjct: 61  RSLDARNEDEVTAFLN-AADAHAPLEVTIFNVGANVNFP-ILETTDRVFRKVWEMACWAG 118

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-- 181
            +  +++A  M       + F  + A  +  S  A +   K  L  + +++A E+ P   
Sbjct: 119 FVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
              + +    V T + +            +     + L     +A A   L     S  T
Sbjct: 179 HVAHLIIDSGVDTAWVRERREQMF---GKDALANPDLLMPPAAVAGAYWQLYQQPKSAWT 235

Query: 242 GETLV 246
            E  +
Sbjct: 236 FEMEI 240

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  173 bits (441), Expect = 2e-53
 Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 29/276 (10%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK------------NVDKAVEK 55
             F+GK A++T   +G+G   A  L   GA + I  R +             ++ + V  
Sbjct: 6   ADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVAL 65

Query: 56  LKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD 115
           ++  G   I     V +    ++ + +  +  G ID+ + NA ++  A  L + + +  D
Sbjct: 66  VEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIAL-LPEVESAQWD 124

Query: 116 KLWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKA 173
           ++   N+  +   +   AP M  +    +V +SS+ G+    A A Y  +K  ++GLTK 
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKC 184

Query: 174 LAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------------LNRL 219
            A ++      VN VAPG + T           +R  LE  TL                 
Sbjct: 185 AAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAPF 244

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL 255
                +  A+ FL  + +S+ITG  L +  G  +R+
Sbjct: 245 LKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM 280

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  174 bits (444), Expect = 2e-53
 Identities = 66/287 (22%), Positives = 101/287 (35%), Gaps = 46/287 (16%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKAL-GIEVIG 65
                 VA+VT + + +G  +AE L  EG +V +   R     +     L A      I 
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 66  IICHVSNEQHR-----------------KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK 108
           +   +SN                       L+      +GR DV V NA+   Y   LL+
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSF-YPTPLLR 160

Query: 109 TKE--------------SVLDKLWEINVKSSILLMQDAAPHM--------QKGSSVVFIS 146
             E              +    L+  N  +   L++  A  +            S++ + 
Sbjct: 161 NDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 220

Query: 147 SIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA 205
                QP     +Y + K AL GLT++ A E+AP   RVN V PG          +    
Sbjct: 221 DAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLV---DDMPPAV 277

Query: 206 VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMA 252
                    L  R  +   ++  + FL S  A YITG  + V GG +
Sbjct: 278 WEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  173 bits (442), Expect = 3e-53
 Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 30/283 (10%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI------------SSRKQKN 48
             +     R QGKVA +T + +G G   A RL  +GA +V             +    + 
Sbjct: 35  RGQGARMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEE 94

Query: 49  VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK 108
           + + V  ++  G  +I     V +    + ++D+ + ++G ID+ V N  ++    +++ 
Sbjct: 95  LKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQG-EVVS 153

Query: 109 TKESVLDKLWEINVKSSILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKT 165
             +     + + N+  +    +   P M    +G SV+F+SS  G +     + Y  +K 
Sbjct: 154 LTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKH 213

Query: 166 ALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLN------- 217
            + GL  +LA E+     RVN V PG V T  A            LE  T  +       
Sbjct: 214 GVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQ 273

Query: 218 ------RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR 254
                       +++ A+A+LASD+A YI G  + V GG  +R
Sbjct: 274 LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  171 bits (435), Expect = 6e-53
 Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 12/247 (4%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGII-CHV 70
           + A++T +++GIG  +A RL  +G ++ I   + ++  ++  E+ +  G  ++ ++  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSILL 128
              +    L+ +  E  G +D  V NA +     D  L++ K+   + + E N+ +    
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGIT---RDTLLVRMKDEDWEAVLEANLSAVFRT 118

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVN 185
            ++A   M   +   +V I+S+ G       A Y  +K  L+G T+A+A E A     VN
Sbjct: 119 TREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVN 178

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            VAPGF+ T   + L     V++A   +    R G    +A A+AFL S+ A YITG+TL
Sbjct: 179 AVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTL 236

Query: 246 VVAGGMA 252
            V GG+ 
Sbjct: 237 CVDGGLT 243

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  173 bits (441), Expect = 6e-53
 Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 22/251 (8%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-------VDKAVEKLKALG 60
            R  G    +T +++GIG  +A +   +GA++VI+++  +        +  A E+++A+G
Sbjct: 41  GRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVG 100

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
            + +  I  V +EQ     ++K ++K+G ID+ V NA+        L T    LD +  +
Sbjct: 101 GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN-TLDTPTKRLDLMMNV 159

Query: 121 NVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQP--PSAMAMYGVTKTALLGLTKALAA 176
           N + + L  +   P++   K + ++ IS      P        Y + K  +      +A 
Sbjct: 160 NTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAE 219

Query: 177 EMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
           E   +  VN + P       A  +LG   +                  +A A A+     
Sbjct: 220 EFKGEIAVNALWPKTAIHTAAMDMLGGPGIESQCR---------KVDIIADA-AYSIFQK 269

Query: 237 ASYITGETLVV 247
               TG  ++ 
Sbjct: 270 PKSFTGNFVID 280

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  170 bits (434), Expect = 8e-53
 Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 13/258 (5%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKAL 59
               +M      ++A VT    GIG  + +RL  +G  VV           K +E  KAL
Sbjct: 4   HHHHHM--VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKL 117
           G +      +V +    K   DK   + G IDV V NA +     D    K        +
Sbjct: 62  GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGIT---RDVVFRKMTREDWQAV 118

Query: 118 WEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALA 175
            + N+ S   + +     M  +    ++ ISS+ G +       Y   K  + G T +LA
Sbjct: 119 IDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178

Query: 176 AEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
            E+A     VN V+PG++ T   +A+     V + +     + RLG+   + + +A+LAS
Sbjct: 179 QEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLAS 236

Query: 235 DDASYITGETLVVAGGMA 252
           +++ + TG    + GG+ 
Sbjct: 237 EESGFSTGADFSLNGGLH 254

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  170 bits (433), Expect = 1e-52
 Identities = 82/253 (32%), Positives = 135/253 (53%), Gaps = 18/253 (7%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           +M     GK +++T ++ GIG  +A  L   G+ V+IS     N +K      AL     
Sbjct: 8   HM-IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGS---NEEKLKSLGNALKDNYT 63

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
             +C+++N++         + K   +D+ V NA +    +D   ++ K+   DK+ +IN+
Sbjct: 64  IEVCNLANKEE----CSNLISKTSNLDILVCNAGIT---SDTLAIRMKDQDFDKVIDINL 116

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           K++ +L ++A   M  ++   ++ ISSI G       A Y  +K  L+G+TK+L+ E+A 
Sbjct: 117 KANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVAT 176

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN VAPGF+ +     L  N+  R+A+  K  L   G   ++A A+AFLAS++ASY
Sbjct: 177 RGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASY 234

Query: 240 ITGETLVVAGGMA 252
           ITG+TL V GGM 
Sbjct: 235 ITGQTLHVNGGML 247

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  169 bits (430), Expect = 3e-52
 Identities = 37/251 (14%), Positives = 73/251 (29%), Gaps = 20/251 (7%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE-KLKALGIEVIGII 67
               K  +  A+  GIGL  +  L        +   + +N     E K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVSNEQHR-KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
             V+      K L+ K  ++   +D+ +  A +           +  +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGI---------LDDHQIERTIAINFTGLV 112

Query: 127 LLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
                      K     G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
                 + PG   T           V   +    L +   T+             +    
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANK--- 229

Query: 241 TGETLVVAGGM 251
            G    +  G 
Sbjct: 230 NGAIWKLDLGT 240

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  169 bits (430), Expect = 3e-52
 Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 21/252 (8%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           + +    +  +VT   +GIGL +A      G  V I+ R  +  +  +            
Sbjct: 15  VPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFL-----------A 63

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVK 123
           + C +++ +  +    +  E +G ++V + NA V     D  L++  E     + E N+ 
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT---KDQLLMRMSEEDFTSVVETNLT 120

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP- 180
            +  +++ A   M   K   VV ISS+ G    +  A Y  +K  L+G  ++LA E+   
Sbjct: 121 GTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSR 180

Query: 181 DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           +   N VAPGFV T   + L   D  R  +  +  L R      +AA + FLASDDASYI
Sbjct: 181 NITFNVVAPGFVDTDMTKVL--TDEQRANIVSQVPLGRYARPEEIAATVRFLASDDASYI 238

Query: 241 TGETLVVAGGMA 252
           TG  + V GG+ 
Sbjct: 239 TGAVIPVDGGLG 250

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  168 bits (429), Expect = 8e-52
 Identities = 77/254 (30%), Positives = 121/254 (47%), Gaps = 15/254 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVI 64
            A     ++A+VT +++GIG  +A  L   GA V ++ +      D+ V  + A G E  
Sbjct: 22  TALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAF 81

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINV 122
            +   VS E   + L    +E++GR+DV V NA +     D  LL+ K      + ++N+
Sbjct: 82  AVKADVSQESEVEALFAAVIERWGRLDVLVNNAGIT---RDTLLLRMKRDDWQSVLDLNL 138

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
               L  + AA  M  Q+   ++ I+S+ G       A Y   K  ++GLTK +A E+A 
Sbjct: 139 GGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELAS 198

Query: 181 -DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD-AS 238
               VN VAPGF+ T     L       + L     L R G    +A  + FLA+D  A+
Sbjct: 199 RGITVNAVAPGFIATDMTSEL-----AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAA 253

Query: 239 YITGETLVVAGGMA 252
           YITG+ + + GG+ 
Sbjct: 254 YITGQVINIDGGLV 267

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  168 bits (427), Expect = 9e-52
 Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 21/251 (8%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
              F  +  +VT   +GIGL +A+RL  +G  V ++ R                  + G+
Sbjct: 10  KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGS-----------GAPKGLFGV 58

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKS 124
              V++            E  G ++V V NA ++   AD  L++  E   +K+   N+  
Sbjct: 59  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS---ADAFLMRMTEEKFEKVINANLTG 115

Query: 125 SILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-D 181
           +  + Q A+  M   K   ++FI S++G       A Y  +K  ++G+ +++A E++  +
Sbjct: 116 AFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 175

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
              N VAPG++ T   +AL  ++ +++         R+GT   +A  ++FLAS+DASYI+
Sbjct: 176 VTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYIS 233

Query: 242 GETLVVAGGMA 252
           G  + V GGM 
Sbjct: 234 GAVIPVDGGMG 244

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  167 bits (425), Expect = 2e-51
 Identities = 53/246 (21%), Positives = 82/246 (33%), Gaps = 8/246 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL--KALGIEVIGIICHV 70
            V  +T S  GIG  + E L   G +V+   R Q +++  +     +   +  +   C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLL-KTKESVLDKLWEINVKSSILLM 129
             +                + V V    V+     L              +   ++    
Sbjct: 62  VLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPG 121

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
               P +             +A  Q  + +A Y  +K A+  L +    + A    R+N 
Sbjct: 122 AAELPMVEAMLAGDEARAIELAEQQGQTHLA-YAGSKYAVTCLARRNVVDWAGRGVRLNV 180

Query: 187 VAPGFVPTHFAQALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           VAPG V T   QA   +             L R      +A AIAFL    AS+I G  L
Sbjct: 181 VAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPREVAEAIAFLLGPQASFIHGSVL 240

Query: 246 VVAGGM 251
            V GGM
Sbjct: 241 FVDGGM 246

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  165 bits (421), Expect = 5e-51
 Identities = 43/243 (17%), Positives = 93/243 (38%), Gaps = 18/243 (7%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
               +VT +  G+G  +   L   G  V +  R+ + + +       LG  VIGI+  ++
Sbjct: 3   LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQEL---LLGNAVIGIVADLA 59

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + +         VE  G  ++ +  A    +   +       + ++ E N+ S+IL+ Q 
Sbjct: 60  HHEDVDVAFAAAVEWGGLPELVLHCAGTGEFGP-VGVYTAEQIRRVMESNLVSTILVAQQ 118

Query: 132 AAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAP 189
               + ++G  +  + S A     +  ++Y  +K  + G  ++L AE+     R+  + P
Sbjct: 119 TVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYP 178

Query: 190 GFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF-LASDDASYITGETLVVA 248
             + + F       D            +   T  + AA +   L +  + ++T   +   
Sbjct: 179 SGIRSEFWDNTDHVDP-----------SGFMTPEDAAAYMLDALEARSSCHVTDLFIGRN 227

Query: 249 GGM 251
            G 
Sbjct: 228 EGH 230

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  167 bits (424), Expect = 8e-51
 Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 9/245 (3%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
                F G+ AVVT    GIGL  A      GA +V+S   Q  +++AV  L+  G +  
Sbjct: 24  GFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAH 83

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
           G++C V +      L D+     G +DV   NA +   A  L +        + +I++  
Sbjct: 84  GVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWG 142

Query: 125 SILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           SI  ++   P + +   G  + F +S AG  P + +  YGV K  ++GL + LA E+ P+
Sbjct: 143 SIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPN 202

Query: 182 T-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
              V+ + P  V T     L+ N    +  +        G  G +      +++DD + +
Sbjct: 203 GIGVSVLCPMVVET----KLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARL 258

Query: 241 TGETL 245
           T + +
Sbjct: 259 TADAI 263

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  164 bits (418), Expect = 2e-50
 Identities = 53/244 (21%), Positives = 96/244 (39%), Gaps = 22/244 (9%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQKNVDKAVEKLKALGIEVIG 65
            + ++T + +GIG  +A                +V+SSR   +++K   + +A G     
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           I   +S+    + L    VE+YG ID  V NA V  + A L    E   D     N+K +
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRFGA-LSDLTEEDFDYTMNTNLKGT 121

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     M  Q    + FI+S+A  +     ++Y ++K    GL + +         
Sbjct: 122 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 181

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           R+  V PG V T     +  +D ++           +    ++AA +       +  +  
Sbjct: 182 RITDVQPGAVYTPMWGKV--DDEMQA---------LMMMPEDIAAPVVQAYLQPSRTVVE 230

Query: 243 ETLV 246
           E ++
Sbjct: 231 EIIL 234

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  164 bits (418), Expect = 3e-50
 Identities = 66/248 (26%), Positives = 115/248 (46%), Gaps = 10/248 (4%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICH 69
             +VA VT    G+G  ++ RL   G +V +S S +  +V   +   +  G +       
Sbjct: 24  AKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVD 83

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSIL 127
           V++ +  +   +K +  +G++DV + NA +     D   +K  +   D +   ++ +   
Sbjct: 84  VADFESCERCAEKVLADFGKVDVLINNAGIT---RDATFMKMTKGDWDAVMRTDLDAMFN 140

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRV 184
           + +     M  ++   +V I S+ G +     A Y   K  + G TK LA E A     V
Sbjct: 141 VTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITV 200

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N V+PG++ T   +A+   D +   +  +  + RLG    +AA IAFL SDDA ++TG  
Sbjct: 201 NTVSPGYLATAMVEAV-PQDVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGAD 259

Query: 245 LVVAGGMA 252
           L + GGM 
Sbjct: 260 LAINGGMH 267

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  160 bits (406), Expect = 1e-48
 Identities = 60/272 (22%), Positives = 93/272 (34%), Gaps = 58/272 (21%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
            + V++    GIG    + L   G  +V    +                    +I  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA-----------------EVIADLST 44

Query: 73  EQHRKNLIDKTVEK-YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            + RK  I   + K    +D  VL A + P    L          +  +N   +  LM  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGPQTKVL--------GNVVSVNYFGATELMDA 96

Query: 132 AAPHMQKG--SSVVFISSIAGYQ----------------------------PPSAMAMYG 161
             P ++KG   + V ISS+A                                      Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKA-LEGKTLLNRL 219
            +K AL    +  AA       R+N +APG   T   QA L +    ++  +    + R 
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
                MA+ IAFL S  ASY+ G  +V+ GG+
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  158 bits (402), Expect = 3e-48
 Identities = 37/246 (15%), Positives = 85/246 (34%), Gaps = 26/246 (10%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
                +V      +G  + E     G +V+                       I +  + 
Sbjct: 2   SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSAN----------DQADSNILVDGNK 51

Query: 71  SNEQHRKNLIDKTVE--KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
           +  +  ++++++T    +  ++D     A      +   K      D + + +V SS + 
Sbjct: 52  NWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIA 111

Query: 129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA---PDTRVN 185
            + A  H++ G  +    + A   P  +M  YG+ K A+  LT +LAA+ +    ++ V 
Sbjct: 112 AKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 171

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY-ITGET 244
            + P  + T            RK +      +       ++  +    ++ +S   +G  
Sbjct: 172 TIMPVTLDT---------PMNRKWMPNAD-HSSWTPLSFISEHLLKWTTETSSRPSSGAL 221

Query: 245 LVVAGG 250
           L +   
Sbjct: 222 LKITTE 227

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  155 bits (395), Expect = 5e-47
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 19/257 (7%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IE 62
           M+   Q  +A++T ++QGIG  +A  L  +G  VV+ +R ++N++K  +++        E
Sbjct: 1   MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQE 60

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
            I +   +++       I    +KYG +D+ V  AA+       L        K+ EINV
Sbjct: 61  PIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG--SLSEPVDNFRKIMEINV 118

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            +   +++     M  QK   +  ++S A     +   +YG TK ALLGL ++L  E+AP
Sbjct: 119 IAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAP 178

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA-S 238
              RV  + PG+V T  A+        +           +    ++   I  L +     
Sbjct: 179 LGIRVTTLCPGWVNTDMAKKA--GTPFKDE--------EMIQPDDLLNTIRCLLNLSENV 228

Query: 239 YITGETLVVAGGMASRL 255
            I      +   +    
Sbjct: 229 CIKDIVFEMKKSIIEGH 245

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  159 bits (405), Expect = 2e-46
 Identities = 74/261 (28%), Positives = 119/261 (45%), Gaps = 28/261 (10%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIE 62
           +  K   GKVAVVT + +GIG  +AE    +GA+VV       +VD A E LK +   + 
Sbjct: 206 DWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAI-----DVDGAAEDLKRVADKVG 260

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYG-RIDVFVLNAAVNPYAAD--LLKTKESVLDKLWE 119
              +   V+ +     +     E +G ++D+ V NA +     D  L    E   D +  
Sbjct: 261 GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGIT---RDKLLANMDEKRWDAVIA 317

Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGY-----QPPSAMAMYGVTKTALLGLTK 172
           +N+ +   L +    +    +G  V+ +SS+AG      Q       Y  TK  ++GL +
Sbjct: 318 VNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQ-----TNYATTKAGMIGLAE 372

Query: 173 ALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF 231
           ALA  +A     +N VAPGF+ T   +A+    A R+       L + G   ++A  IA+
Sbjct: 373 ALAPVLADKGITINAVAPGFIETKMTEAI--PLATREVGRRLNSLFQGGQPVDVAELIAY 430

Query: 232 LASDDASYITGETLVVAGGMA 252
            AS  ++ +TG T+ V G   
Sbjct: 431 FASPASNAVTGNTIRVCGQAM 451

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  152 bits (387), Expect = 2e-45
 Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 6/215 (2%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           + +    +  QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     LG
Sbjct: 17  LNEEFRPEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELG 76

Query: 61  -IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
                 I   + +    +  + +  +  G +D+ +LN   N    +L       + K  E
Sbjct: 77  AASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS-LNLFHDDIHHVRKSME 135

Query: 120 INVKSSILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           +N  S ++L   A P +++ + S+V +SS+AG      +A Y  +K AL G   ++  E 
Sbjct: 136 VNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEY 195

Query: 179 APDT---RVNCVAPGFVPTHFAQALLGNDAVRKAL 210
           +       +     G + T  A   +      +A 
Sbjct: 196 SVSRVNVSITLCVLGLIDTETAMKAVSGIVHMQAA 230

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  147 bits (373), Expect = 4e-43
 Identities = 59/246 (23%), Positives = 108/246 (43%), Gaps = 21/246 (8%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIG 65
           K F G+ A VT    G+G+G+  +L  +G  V I+  +Q ++DKA+  L+A   G EV+G
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMG 63

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V++ +  K   D+   ++G + +   NA VN     + ++     D L  +N+   
Sbjct: 64  VQLDVASREGFKMAADEVEARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGV 122

Query: 126 ILLMQDAAPHM--------QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           +  +    P M        QKG  VV  +S+A +    +  +Y  TK A+ GL+++L   
Sbjct: 123 VNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYS 182

Query: 178 MAPDT-RVNCVAPGFVPTHFAQ---------ALLGNDAVRKALEGKTLLNRLGTTGNMAA 227
           +      V+ + PG V ++                    + A+E    ++  G   ++  
Sbjct: 183 LLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIG 242

Query: 228 AIAFLA 233
           A    A
Sbjct: 243 ARVIEA 248

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  143 bits (364), Expect = 4e-42
 Identities = 58/264 (21%), Positives = 102/264 (38%), Gaps = 25/264 (9%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K+F+G  A+V+    G+G     RL  +G  VVI+       +K       LG     + 
Sbjct: 26  KQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADL---AAEKGKALADELGNRAEFVS 82

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL-----DKLWEINV 122
            +V++E      I+   +        V        A  +++   S        K  ++ +
Sbjct: 83  TNVTSEDSVLAAIEAANQLGRLRYAVV-AHGGFGVAQRIVQRDGSPADMGGFTKTIDLYL 141

Query: 123 KSSILLMQDAAPHMQK--------GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
             +  + +  A  +            ++V  +SIAGY+       Y   K  ++GLT A 
Sbjct: 142 NGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAA 201

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFL 232
           A +++    RVN +APG + T   +++   +              RLGT    A A AFL
Sbjct: 202 ARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFADAAAFL 259

Query: 233 ASDDASYITGETLVVAGG--MASR 254
            ++   YI GE + + G      +
Sbjct: 260 LTN--GYINGEVMRLDGAQRFTPK 281

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  136 bits (346), Expect = 2e-39
 Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 7/197 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K   G++ ++T +  GIG   A       + +V+    +  +++   K K LG +V   +
Sbjct: 27  KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
              SN +   +   K   + G + + V NA V  Y +DL  T++  ++K +E+NV +   
Sbjct: 87  VDCSNREDIYSSAKKVKAEIGDVSILVNNAGV-VYTSDLFATQDPQIEKTFEVNVLAHFW 145

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P M       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 146 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 205

Query: 183 -RVNCVAPGFVPTHFAQ 198
            +  C+ P FV T F +
Sbjct: 206 VKTTCLCPNFVNTGFIK 222

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  134 bits (339), Expect = 3e-39
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 37/236 (15%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
               ++  ++  +G  V ERL  + A V+ + R   +V   +  + +             
Sbjct: 3   AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSGDVTVDITNIDS------------- 48

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
                   I K  E+ G++D  V       ++  L +             +   I L+  
Sbjct: 49  --------IKKMYEQVGKVDAIVSATGSATFSP-LTELTPEKNAVTISSKLGGQINLVLL 99

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF 191
               +    S    + I    P    A   +   A+    K+ A EM    R+N V+P  
Sbjct: 100 GIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNV 159

Query: 192 VPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           +   + +     +        K              A AF  S      TGE+  V
Sbjct: 160 LEESWDKLEPFFEGFLPVPAAK-------------VARAFEKSVFG-AQTGESYQV 201

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  132 bits (335), Expect = 5e-38
 Identities = 63/264 (23%), Positives = 103/264 (39%), Gaps = 22/264 (8%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M  + + +V +VT ++ G+G  V   L  EGA+V+             E    LG  V  
Sbjct: 1   MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDL---KPPAGEEPAAELGAAVRF 57

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINV 122
               V+NE      +    +++G +   V  A   P    L ++    LD   +   +N+
Sbjct: 58  RNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNL 117

Query: 123 KSSILLMQDAAPHMQKGS--------SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
             +  +++ AA  M +G          +V  +SIA +      A Y  +K  +  LT   
Sbjct: 118 IGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPA 177

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFL 232
           A E+A    RV  +APG   T     +     V+ AL        RLG     AA +  +
Sbjct: 178 ARELARFGIRVVTIAPGIFDTPMMAGM--PQDVQDALAASVPFPPRLGRAEEYAALVKHI 235

Query: 233 ASDDASYITGETLVVAGG--MASR 254
             +    + GE + + G   MA R
Sbjct: 236 CENT--MLNGEVIRLDGALRMAPR 257

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  134 bits (339), Expect = 5e-38
 Identities = 62/266 (23%), Positives = 99/266 (37%), Gaps = 26/266 (9%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI----------SSRKQKNVDKAVEKLKA 58
              G+V +VT +  GIG   A     EGA VV+           +         V+++ A
Sbjct: 24  VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G E +    +V++      LI   VE +G +DV V NA +      +  T E   D + 
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRM-IANTSEEEFDAVI 142

Query: 119 EINVKSSILLMQDAAPHM--------QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL 170
            +++K     M+ AA +              ++  SS AG Q       Y   K  +  L
Sbjct: 143 AVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATL 202

Query: 171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
           T   AAEM      VN +AP    T   + +       +  +            N++  +
Sbjct: 203 TLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMATQDQDF-----DAMAPENVSPLV 256

Query: 230 AFLASDDASYITGETLVVAGGMASRL 255
            +L S +A  +TG+   V GG     
Sbjct: 257 VWLGSAEARDVTGKVFEVEGGKIRVA 282

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  132 bits (335), Expect = 7e-38
 Identities = 59/266 (22%), Positives = 111/266 (41%), Gaps = 24/266 (9%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           M         +G VAV+T    G+GL  AERL  +GAS V+             + K LG
Sbjct: 3   MAAACR--SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDL---PNSGGEAQAKKLG 57

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL-----D 115
              +     V++E+  +  +     K+GR+DV V  A +   +      K          
Sbjct: 58  NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQ 117

Query: 116 KLWEINVKSSILLMQDAAPHMQKGS--------SVVFISSIAGYQPPSAMAMYGVTKTAL 167
           ++ ++N+  +  +++  A  M +           ++  +S+A ++     A Y  +K  +
Sbjct: 118 RVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGI 177

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNM 225
           +G+T  +A ++AP   RV  +APG   T    +L   + V   L  +    +RLG     
Sbjct: 178 VGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEY 235

Query: 226 AAAIAFLASDDASYITGETLVVAGGM 251
           A  +  +   +  ++ GE + + G +
Sbjct: 236 AHLVQAII--ENPFLNGEVIRLDGAI 259

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  129 bits (326), Expect = 8e-37
 Identities = 57/242 (23%), Positives = 95/242 (39%), Gaps = 21/242 (8%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGI 66
             + K+AVVT +T G+G+ + + L  +     +            E L AL     V  I
Sbjct: 2   SLKKKIAVVTGATGGMGIEIVKDLSRDHIVYALGRNP--------EHLAALAEIEGVEPI 53

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              +  E   +  +D  ++    +D  V  AAV      +     +      ++NV    
Sbjct: 54  ESDIVKEVLEEGGVD-KLKNLDHVDTLVHAAAVARDTT-IEAGSVAEWHAHLDLNVIVPA 111

Query: 127 LLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
            L +   P ++  S  V++I+S AG  P     +Y  +K AL GL  A   E A +  RV
Sbjct: 112 ELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRV 171

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYITGE 243
           + V+PG   T   Q L   D+       +  +        +A AI F+    + + IT  
Sbjct: 172 STVSPGPTNTPMLQGL--MDSQGTNFRPEIYI----EPKEIANAIRFVIDAGETTQITNV 225

Query: 244 TL 245
            +
Sbjct: 226 DV 227

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  126 bits (320), Expect = 6e-36
 Identities = 52/227 (22%), Positives = 96/227 (42%), Gaps = 16/227 (7%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICH 69
           + KVAV+T +++GIG  +A  L  +G ++ + +R    ++K   +L +  G+EV      
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLD 60

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           VS  +  +    K +E++G +DV V NA +  +   L +  E    ++ E+N+      +
Sbjct: 61  VSKAESVEEFSKKVLERFGDVDVVVANAGLGYFKR-LEELSEEEFHEMIEVNLLGVWRTL 119

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
           +     +    G ++V  S ++    P     Y  TK A   L +    E     R   +
Sbjct: 120 KAFLDSLKRTGGLALVTTSDVSARLIPY-GGGYVSTKWAARALVRTFQIENPD-VRFFEL 177

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
            PG V T+F  +  G    +  L+             +A A+  L  
Sbjct: 178 RPGAVDTYFGGSKPGKPKEKGYLKPD----------EIAEAVRCLLK 214

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  123 bits (311), Expect = 1e-34
 Identities = 48/195 (24%), Positives = 82/195 (42%), Gaps = 14/195 (7%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VIGIIC 68
               ++T +++GIG   A  L  +G  V + +R +       ++L+AL  E    + +  
Sbjct: 5   KGAVLITGASRGIGEATARLLHAKGYRVGLMARDE-------KRLQALAAELEGALPLPG 57

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V  E      +    E +G +   V NA V      + +        + + N+  + L 
Sbjct: 58  DVREEGDWARAVAAMEEAFGELSALVNNAGVGVMKP-VHELTLEEWRLVLDTNLTGAFLG 116

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
           ++ A P +  + G ++V + S+AG  P    A Y  +K  LLGL  A   ++     RV 
Sbjct: 117 IRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVV 176

Query: 186 CVAPGFVPTHFAQAL 200
            V PG V T FA   
Sbjct: 177 NVLPGSVDTGFAGNT 191

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  125 bits (316), Expect = 1e-34
 Identities = 56/259 (21%), Positives = 98/259 (37%), Gaps = 29/259 (11%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---------SSRKQKNVDKAVEKLKAL 59
           RF G+V +VT +  G+G   A      GA VV+           +     DK VE+++  
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 60  GIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
           G + +     V   +    L+   ++ +GRIDV V NA +    +   +  +   D +  
Sbjct: 66  GGKAVANYDSVEAGE---KLVKTALDTFGRIDVVVNNAGILRDRS-FSRISDEDWDIIQR 121

Query: 120 INVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           ++++ S  + + A  HM  Q    ++  +S +G       A Y   K  LLGL   L  E
Sbjct: 122 VHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 181

Query: 178 MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
               +   N +AP    +   + ++  D V                  +A  + +L  + 
Sbjct: 182 GRKNNIHCNTIAPNAG-SRMTETVMPEDLVEA-----------LKPEYVAPLVLWLCHES 229

Query: 237 ASYITGETLVVAGGMASRL 255
                G    V  G   +L
Sbjct: 230 C-EENGGLFEVGAGWIGKL 247

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  128 bits (323), Expect = 4e-34
 Identities = 55/262 (20%), Positives = 108/262 (41%), Gaps = 29/262 (11%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---------SSRKQKNVDKAVEKL 56
               F+ KV ++T +  G+G   +      GA VV+              K  D  V+++
Sbjct: 2   SPVDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEI 61

Query: 57  KALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDK 116
              G   +    +V +      +++  V+ +G + V + NA +    A + K  E     
Sbjct: 62  VKNGGVAVADYNNVLDGD---KIVETAVKNFGTVHVIINNAGIL-RDASMKKMTEKDYKL 117

Query: 117 LWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKAL 174
           + ++++  +  + + A P+   QK   +V  SS AG       A Y   K+ALLG  + L
Sbjct: 118 VIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETL 177

Query: 175 AAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A E A  + + N +AP    +   ++++    + K                +A  + +L+
Sbjct: 178 AKEGAKYNIKANAIAP-LARSRMTESIMPPPMLEK-----------LGPEKVAPLVLYLS 225

Query: 234 SDDASYITGETLVVAGGMASRL 255
           S +   +TG+   VA G  +++
Sbjct: 226 SAEN-ELTGQFFEVAAGFYAQI 246

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  118 bits (297), Expect = 2e-30
 Identities = 62/258 (24%), Positives = 113/258 (43%), Gaps = 21/258 (8%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
                     + KV ++T +  G+G   A+     GA VV++  K  +  K V+++KA G
Sbjct: 311 DASGAPTVSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFK--DATKTVDEIKAAG 368

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
            E       V+ +   + +I   ++KYG ID+ V NA +    +   K  +   D + ++
Sbjct: 369 GEAWPDQHDVAKDS--EAIIKNVIDKYGTIDILVNNAGILRDRS-FAKMSKQEWDSVQQV 425

Query: 121 NVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           ++  +  L + A P+   ++   ++ I+S +G       A Y  +K  +LGL+K +A E 
Sbjct: 426 HLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEG 485

Query: 179 AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           A  + +VN VAP    T    +++                 L     +A  + +L +DD 
Sbjct: 486 AKNNIKVNIVAP-HAETAMTLSIMREQDK-----------NLYHADQVAPLLVYLGTDDV 533

Query: 238 SYITGETLVVAGGMASRL 255
             +TGET  + GG     
Sbjct: 534 -PVTGETFEIGGGWIGNT 550

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  121 bits (307), Expect = 6e-34
 Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 5/195 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M    QGKVA++T ++ GIG   A  L  EGA+V I++R+ + +    ++L A G +V  
Sbjct: 1   MPSALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHV 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKS 124
           +   V++ Q     +  TVE  G +D+ V NA +      +   T +    ++ + N+  
Sbjct: 61  LELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTD--WTRMIDTNLLG 118

Query: 125 SILLMQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
            + + + A PH+ +   +VV +SSIAG       A+Y  TK  +   ++ L  E+     
Sbjct: 119 LMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178

Query: 183 RVNCVAPGFVPTHFA 197
           RV  + PG   T   
Sbjct: 179 RVVVIEPGTTDTELR 193

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  120 bits (304), Expect = 2e-33
 Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 32/265 (12%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
             +  VAVVT    G+GL   +RL   GA VV+   + ++V      +  LG        
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV------VADLGDRARFAAA 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVL-----DKLWEINVK 123
            V++E    + +D   E  G + + V  A      A  + +++ V       K+ +IN+ 
Sbjct: 60  DVTDEAAVASALD-LAETMGTLRIVVNCAGTGN--AIRVLSRDGVFSLAAFRKIVDINLV 116

Query: 124 SSILLMQDAAPHMQKGSS----------VVFISSIAGYQPPSAMAMYGVTKTALLGLTKA 173
            S  +++ AA  + K             ++  +S+A +      A Y  +K  ++G+T  
Sbjct: 117 GSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLP 176

Query: 174 LAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAF 231
           +A ++A    RV  +APG   T    +L   +  R +L  +    +RLG      A    
Sbjct: 177 IARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAVH 234

Query: 232 LASDDASYITGETLVVAGG--MASR 254
           +  +    + GE + + G   MA R
Sbjct: 235 IIENP--MLNGEVIRLDGAIRMAPR 257

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  120 bits (302), Expect = 5e-33
 Identities = 62/247 (25%), Positives = 117/247 (47%), Gaps = 19/247 (7%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           M +  M +R++ ++A+VT ++ GIG  VA  L  +G  VV  +R   N+++   + K+ G
Sbjct: 22  MARPGM-ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAG 80

Query: 61  --IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
               +I   C +SNE+   ++      ++  +D+ + NA +      LL    S    ++
Sbjct: 81  YPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMF 139

Query: 119 EINVKSSILLMQDAAPHMQKGSS----VVFISSIAGYQ--PPSAMAMYGVTKTALLGLTK 172
            +NV +  +  ++A   M++ +     ++ I+S++G++  P S    Y  TK A+  LT+
Sbjct: 140 NVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTE 199

Query: 173 ALAAEMAP---DTRVNCVAPGFVPTHFAQALLGNDAVR--KALEGKTLLNRLGTTGNMAA 227
            L  E+       R  C++PG V T FA  L   D  +     E    L       ++A 
Sbjct: 200 GLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCL----KPEDVAE 255

Query: 228 AIAFLAS 234
           A+ ++ S
Sbjct: 256 AVIYVLS 262

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  117 bits (296), Expect = 3e-32
 Identities = 55/229 (24%), Positives = 102/229 (44%), Gaps = 13/229 (5%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
             KV ++T ++ GIG G+A  LG+ GA +++ +R+Q  ++    +++  G   +  +  V
Sbjct: 3   MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDV 62

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSILLM 129
           ++           V+ +GRIDV V NA V P +    +K  E   +++ ++N+K  +  +
Sbjct: 63  TDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDE--WERMIDVNIKGVLWGI 120

Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCV 187
               P M+   S  ++ I SI         A+Y  TK A+  ++  L  E     RV CV
Sbjct: 121 GAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQESTN-IRVTCV 179

Query: 188 APGFVPTHFAQALLGNDAVR--KALEGKTLLNRLGTTGNMAAAIAFLAS 234
            PG V +  A  +   + +          L        ++A A+  +  
Sbjct: 180 NPGVVESELAGTITHEETMAAMDTYRAIAL-----QPADIARAVRQVIE 223

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  116 bits (292), Expect = 7e-32
 Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 32/257 (12%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A+VT    G+G   A  L   G  VV+       +D     L+  G ++I +   V+ 
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVV-------LD-----LRREGEDLIYVEGDVTR 50

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD---KLWEINVKSSILLM 129
           E+  +  + +  E+   +   V  A V      L K     L+   ++ E+N+  +  ++
Sbjct: 51  EEDVRRAVARAQEE-APLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVL 109

Query: 130 QDAAPHMQKGS--------SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           + AA  M++           +V  +S+A ++     A Y  +K  ++ LT   A E+A  
Sbjct: 110 RLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW 169

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFLASDDASY 239
             RV  VAPG   T   Q L   +  + +L  +     RLG     AA +  +  +    
Sbjct: 170 GIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILENP--M 225

Query: 240 ITGETLVVAGG--MASR 254
           + GE + + G   MA R
Sbjct: 226 LNGEVVRLDGALRMAPR 242

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  121 bits (306), Expect = 9e-32
 Identities = 61/267 (22%), Positives = 110/267 (41%), Gaps = 29/267 (10%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI---------SSRKQKNVDK 51
           M   +   R+ G+VAVVT +  G+G   A      GA VV+             Q+  D 
Sbjct: 8   MSSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADI 67

Query: 52  AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE 111
            V++++  G E +     V +      +I+  ++ +GR+D+ V NA +    + L+KT E
Sbjct: 68  VVDEIRKAGGEAVADYNSVIDGA---KVIETAIKAFGRVDILVNNAGILRDRS-LVKTSE 123

Query: 112 SVLDKLWEINVKSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG 169
              + + ++++K S    Q A P+M  Q    ++  SS +G         Y   K  L+G
Sbjct: 124 QDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIG 183

Query: 170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAA 228
           L   +A E A  +   N + P    +   + +L +    +                +A  
Sbjct: 184 LANTVAIEGARNNVLCNVIVP-TAASRMTEGILPDILFNE-----------LKPKLIAPV 231

Query: 229 IAFLASDDASYITGETLVVAGGMASRL 255
           +A+L  +      G  +  A G A++L
Sbjct: 232 VAYLCHESCE-DNGSYIESAAGWATKL 257

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  115 bits (289), Expect = 5e-31
 Identities = 46/240 (19%), Positives = 90/240 (37%), Gaps = 11/240 (4%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
              +            +T +T G G   A R    G S+V++ R+++ +     +L A  
Sbjct: 10  SSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA-K 68

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
             V+ +   V +       +D   E++  +   + NA +               D + + 
Sbjct: 69  TRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDT 128

Query: 121 NVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
           N+K  +   +   P +     G+S+V + S+AG  P     +YG TK  +   +  L  +
Sbjct: 129 NIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCD 188

Query: 178 MAPDT-RVNCVAPGFVPTHFAQALLGNDAVR--KALEGKTLLNRLGTTGNMAAAIAFLAS 234
           +     RV  + PG   + F+    G D  R  K   G   +       ++A  I ++ +
Sbjct: 189 LQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPI----QPEDIAETIFWIMN 244

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  112 bits (282), Expect = 4e-30
 Identities = 51/197 (25%), Positives = 89/197 (45%), Gaps = 14/197 (7%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVI 64
           M +    K+ V+T ++ GIG  +A R   EG  +++ +R+        E+LKAL     +
Sbjct: 10  MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRV-------ERLKALNLPNTL 62

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVK 123
                V+++      I +  + YG  D  V NA +      D  +  E    +++++NV 
Sbjct: 63  CAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANE--WQRMFDVNVL 120

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
             +  MQ     M  +   +++ ISSIAG +     A Y  TK A+  +++ +  E+A  
Sbjct: 121 GLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAAS 180

Query: 182 T-RVNCVAPGFVPTHFA 197
             RV  +AP  V T   
Sbjct: 181 NVRVMTIAPSAVKTELL 197

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  110 bits (277), Expect = 9e-30
 Identities = 39/193 (20%), Positives = 80/193 (41%), Gaps = 17/193 (8%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVIGIIC 68
            + V+T ++ G+G  +A+    EG +  ++ R +        KL  +       V     
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSE-------SKLSTVTNCLSNNVGYRAR 54

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +++ Q  + L ++           V +A    +   L +     +  L E N+ S+I +
Sbjct: 55  DLASHQEVEQLFEQL---DSIPSTVVHSAGSGYFGL-LQEQDPEQIQTLIENNLSSAINV 110

Query: 129 MQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +++     +    +VV I S A  QP +  + Y   K A+ GL +++  E+     ++  
Sbjct: 111 LRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIA 170

Query: 187 VAPGFVPTHFAQA 199
           V PG + T F + 
Sbjct: 171 VYPGGMATEFWET 183

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  111 bits (280), Expect = 1e-29
 Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 14/239 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKA--LG 60
            A+R   K  ++T ++ GIG   A            +++++R+ + +++  + +      
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN 86

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
            +V      ++  +  K  I+   +++  ID+ V NA     +  + +     +  +++ 
Sbjct: 87  AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDT 146

Query: 121 NVKSSILLMQDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEM 178
           NV + I + Q   P  Q  +S  +V + SIAG       ++Y  +K A+   T +L  E+
Sbjct: 147 NVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKEL 206

Query: 179 APDT-RVNCVAPGFVPTHFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
                RV  +APG V T F+      +    +   +  T L       ++A  I +  S
Sbjct: 207 INTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPL----MADDVADLIVYATS 261

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score =  108 bits (271), Expect = 2e-28
 Identities = 63/284 (22%), Positives = 100/284 (35%), Gaps = 73/284 (25%)

Query: 12  GKVAVVTASTQGIGLGVAERLG-LEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
             VA+VT   +GIGL +   L  L    VV+++R       AV++L+A G+        +
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDI 63

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
            + Q  + L D   ++YG +DV V NA +    AD         +   + N   +  +  
Sbjct: 64  DDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQA-EVTMKTNFFGTRDVCT 122

Query: 131 DAAPHMQKGSSVVFISSIAG---------------------------------------- 150
           +  P ++    VV +SSI                                          
Sbjct: 123 ELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGV 182

Query: 151 ----YQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR-----VNCVAPGFVPTHFAQALL 201
                 P SA   YGVTK  +  L++  A +++   +     +N   PG+V T  A    
Sbjct: 183 HQKEGWPSSA---YGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA---- 235

Query: 202 GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA--SDDASYITGE 243
           G  A +   EG             A    +LA    DA    G+
Sbjct: 236 GPKATKSPEEG-------------AETPVYLALLPPDAEGPHGQ 266

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score =  106 bits (267), Expect = 8e-28
 Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 7/190 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KV +VT ++ G G  +AE     G +V+ ++R     +   + + A       I   V++
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTAR---RTEALDDLVAAYPDRAEAISLDVTD 62

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
            +    +    + +YGR+DV V NA      A   +T E  L  L+E++V     L +  
Sbjct: 63  GERIDVVAADVLARYGRVDVLVNNAGRTQVGA-FEETTERELRDLFELHVFGPARLTRAL 121

Query: 133 APHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAP 189
            P M  +   SVV ISS  G    +  + Y  TK AL  L++ LA E+AP   +V  V P
Sbjct: 122 LPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEP 181

Query: 190 GFVPTHFAQA 199
           G   T+    
Sbjct: 182 GAFRTNLFGK 191

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  103 bits (258), Expect = 9e-27
 Identities = 48/231 (20%), Positives = 93/231 (40%), Gaps = 21/231 (9%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL----GIEVIGIICH 69
           + +VT +T G G  +  R   +G  V+ + R+Q       E+L+ L    G  +      
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQ-------ERLQELKDELGDNLYIAQLD 54

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V N    + ++     ++  ID+ V NA +        K      + + + N K  + + 
Sbjct: 55  VRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMT 114

Query: 130 QDAAPHMQKGSS--VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P M + +   ++ I S AG  P +   +YG TK  +   +  L  ++     RV  
Sbjct: 115 RAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTD 174

Query: 187 VAPGFVP-THFAQALLGND--AVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
           + PG V  T F+      D     K  +    L    T  +++ A+ ++++
Sbjct: 175 IEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVAL----TPEDVSEAVWWVST 221

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score =  102 bits (255), Expect = 6e-26
 Identities = 65/321 (20%), Positives = 101/321 (31%), Gaps = 98/321 (30%)

Query: 1   MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG 60
           M +       + + AVVT   +GIG  + ++L   G  VV++ R      +AVEKLK   
Sbjct: 1   MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSN 60

Query: 61  IEVIGIICHV----SNEQHRKNLIDKTVEKYGRIDVFVLNAAV----------------- 99
            E   ++ H            +L D     +G++D+ V NA V                 
Sbjct: 61  HE--NVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDI 118

Query: 100 ------------NPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSS--VVFI 145
                        P A +L+     + ++  +IN      + +   P +Q   S  +V +
Sbjct: 119 GEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNV 178

Query: 146 SSIAGYQP-------------------------------------------PSAMAMYGV 162
           SS  G                                              PS  A Y  
Sbjct: 179 SSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTT 238

Query: 163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTT 222
           +K  L   T+ LA ++ P  +VNCV PG V T              A EG          
Sbjct: 239 SKACLNAYTRVLANKI-PKFQVNCVCPGLVKTEMN----YGIGNYTAEEG---------- 283

Query: 223 GNMAAAIAFLASDDASYITGE 243
              A  +  +A       +G 
Sbjct: 284 ---AEHVVRIALFPDDGPSGF 301

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score =  100 bits (252), Expect = 8e-26
 Identities = 42/211 (19%), Positives = 83/211 (39%), Gaps = 23/211 (10%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           + +       ++T   +G+GLG+ + L         +  + R ++   K +E L      
Sbjct: 15  VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQ-AKELEDLAKNHSN 73

Query: 63  VIGIICHVSNEQHRKNLID--KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
           +  +   + N      L+   + V K   ++V   NA + P +A +   +   L    + 
Sbjct: 74  IHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQT 133

Query: 121 NVKSSILLMQDAAPHMQKGSS-------------VVFISSIAG---YQPPSAMAMYGVTK 164
           N    I+L +   P ++K +              ++ +SSI G         M  Y  +K
Sbjct: 134 NTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSK 193

Query: 165 TALLGLTKALAAEMAPD-TRVNCVAPGFVPT 194
           +AL   TK+L+ ++ P       + PG+V T
Sbjct: 194 SALNAATKSLSVDLYPQRIMCVSLHPGWVKT 224

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 98.8 bits (247), Expect = 1e-25
 Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 19/189 (10%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
            ++T +T G+G   A  L  +G  +++S R+   + +   ++ A  +        +++E 
Sbjct: 3   VLITGATGGLGGAFARAL--KGHDLLLSGRRAGALAELAREVGARALP-----ADLADEL 55

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
             K L    +E+ G +D+ V        A+ + +    +++++   ++ ++  ++     
Sbjct: 56  EAKAL----LEEAGPLDLLVHAVGKAGRAS-VREAGRDLVEEMLAAHLLTAAFVL----K 106

Query: 135 HM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
           H   QKG+  VF  +   Y      A Y   K AL    +A   E+  +   +  V    
Sbjct: 107 HARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPA 166

Query: 192 VPTHFAQAL 200
           V T     L
Sbjct: 167 VATGLWAPL 175

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 98.6 bits (246), Expect = 4e-25
 Identities = 43/206 (20%), Positives = 85/206 (41%), Gaps = 26/206 (12%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASV-VISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
              VVT + +GIGLG+ ++L  +     +I++ +       ++ +K   + V+ +   V+
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLT--VT 61

Query: 72  NEQHRKNLIDKTVEKYGR--IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
            ++     + K  E  G   + + + NA V        +   +V+ +  ++N  S +LL 
Sbjct: 62  CDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLT 121

Query: 130 QDAAPHMQKGSS-------------VVFISSIAG-------YQPPSAMAMYGVTKTALLG 169
           Q   P ++  +S             V+ ISS  G             +  Y ++K A+  
Sbjct: 122 QKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINM 181

Query: 170 LTKALAAEMAPD-TRVNCVAPGFVPT 194
             + LA ++  D   V    PG+V T
Sbjct: 182 FGRTLAVDLKDDNVLVVNFCPGWVQT 207

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 97.3 bits (243), Expect = 2e-24
 Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 17/252 (6%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALGIEVIG 65
           + K  V+   A+ + I  GVA+ L   GA +V +    R +K ++K +E+L      +  
Sbjct: 31  ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQ 90

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINV 122
               V +++   N  ++  +  G ID    + A            +T         +I+ 
Sbjct: 91  --IDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISS 148

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEMA 179
            S  ++  +A   M +G S+V  + + G     A+  Y   GV K +L    K LA ++ 
Sbjct: 149 YSLTIVAHEAKKLMPEGGSIVATTYLGGEF---AVQNYNVMGVAKASLEANVKYLALDLG 205

Query: 180 PD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
           PD  RVN ++ G + T  A+ + G + + K +E +  L R      +    A+L SD +S
Sbjct: 206 PDNIRVNAISAGPIRTLSAKGVGGFNTILKEIEERAPLKRNVDQVEVGKTAAYLLSDLSS 265

Query: 239 YITGETLVVAGG 250
            +TGE + V  G
Sbjct: 266 GVTGENIHVDSG 277

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 97.1 bits (242), Expect = 6e-24
 Identities = 45/198 (22%), Positives = 80/198 (40%), Gaps = 10/198 (5%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKAL----GIEVIG 65
             K+ ++T ++ G G   AE L   G  V  S R         VE +        +++  
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   V ++      ID+ + + GRIDV + NA    +             +L++INV S+
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGP-AEAFTPEQFAELYDINVLST 122

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP-D 181
             + + A PHM  QK   +++ISS +        +A Y   K A+  +    A E++   
Sbjct: 123 QRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRWG 182

Query: 182 TRVNCVAPGFVPTHFAQA 199
              + + PG   +     
Sbjct: 183 IETSIIVPGAFTSGTNHF 200

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 95.7 bits (239), Expect = 7e-24
 Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 19/257 (7%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALG 60
           +     GK A+V    + + +G  +A +L   GA V +S    R +   +K  E L    
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKL 117
           +        V+ ++    L     E +G +D  V   A  P  A     + T+       
Sbjct: 62  L----FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLA 117

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKAL 174
            E++  S + + + A P +++G  +V ++  A  +    +  Y    + K AL    + L
Sbjct: 118 LEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK---VVPKYNVMAIAKAALEASVRYL 174

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A E+ P   RVN ++ G V T  A+++ G   +   +     L R  T   +     FL 
Sbjct: 175 AYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLL 234

Query: 234 SDDASYITGETLVVAGG 250
           S  AS ITGE + V  G
Sbjct: 235 SPLASGITGEVVYVDAG 251

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 94.9 bits (237), Expect = 2e-23
 Identities = 66/257 (25%), Positives = 109/257 (42%), Gaps = 17/257 (6%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALG 60
           M    +G+  VV   A+ + I  G+A  L   GA ++ +    R +K+V +    L    
Sbjct: 1   MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRND 60

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKL 117
             ++   C V+N+   +       E+ G I       A         + L T        
Sbjct: 61  SIILP--CDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLA 118

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKAL 174
             I+  S   +++ A P M +G S+V ++ + G      M  Y   GV K +L    K L
Sbjct: 119 HNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL---VMPNYNVMGVAKASLDASVKYL 175

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           AA++  +  RVN ++ G + T  A+ +   +++ K +E +  L R  T   +    AFL 
Sbjct: 176 AADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLF 235

Query: 234 SDDASYITGETLVVAGG 250
           SD +  ITGE L V  G
Sbjct: 236 SDMSRGITGENLHVDSG 252

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 63/253 (24%), Positives = 112/253 (44%), Gaps = 21/253 (8%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVISS---RKQKNVDKAVEKLKALGIEVIG 65
           +GK  ++   A+ + I  G+A+    +GA++  +      +K V    ++L +  +    
Sbjct: 5   KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYV---- 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKT-KESVLDKLWEIN 121
               VS E+H K+L +   +  G +D  V + A  P  A    LL+T K +    + EI+
Sbjct: 61  YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAM-EIS 119

Query: 122 VKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEM 178
           V S I L     P +  G+SV+ +S +   +    MA Y   G+ K AL    + LA ++
Sbjct: 120 VYSLIELTNTLKPLLNNGASVLTLSYLGSTK---YMAHYNVMGLAKAALESAVRYLAVDL 176

Query: 179 APD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
                RVN ++ G + T  +  +     + K  E    L +  +   +  A  +L S  +
Sbjct: 177 GKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLS 236

Query: 238 SYITGETLVVAGG 250
           S ++GE   V  G
Sbjct: 237 SGVSGEVHFVDAG 249

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 91.9 bits (229), Expect = 2e-22
 Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 26/256 (10%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALGIEVIG 65
            GK  ++T   S + I  G+A+    EGA +  +    R +  + +   +  +     + 
Sbjct: 13  DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGS----ELV 68

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK-------TKESVLDKLW 118
             C V+++     L       +  +D  V +    P   + +        T+E+      
Sbjct: 69  FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAP--REAIAGDFLDGLTRENFRIAH- 125

Query: 119 EINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALA 175
           +I+  S   L + A P +   +S++ +S +   +   A+  Y   G+ K AL    + LA
Sbjct: 126 DISAYSFPALAKAALPMLSDDASLLTLSYLGAER---AIPNYNTMGLAKAALEASVRYLA 182

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
             +     RVN ++ G + T  A  +     +   +E  + L R  T   +  A AFL S
Sbjct: 183 VSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLS 242

Query: 235 DDASYITGETLVVAGG 250
           D AS +T E + V  G
Sbjct: 243 DLASGVTAEVMHVDSG 258

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 57/257 (22%), Positives = 100/257 (38%), Gaps = 19/257 (7%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALG 60
            +   QGK  ++   A+ + I  G+A+     GA +  +      +K V+   E+L A  
Sbjct: 25  QSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGA-- 82

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKL 117
              +   C V++      + +   +K+G++D  V     +         + T E+     
Sbjct: 83  --FVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNT 140

Query: 118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKAL 174
             I+V S   + + A   M  G S++ ++     +    M  Y   GV K AL    K L
Sbjct: 141 MLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK---VMPNYNVMGVAKAALEASVKYL 197

Query: 175 AAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           A ++ P   RVN ++ G + T  A  +     + K  E    L R  T   +     +  
Sbjct: 198 AVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFL 257

Query: 234 SDDASYITGETLVVAGG 250
           SD +  +TGE      G
Sbjct: 258 SDLSRSVTGEVHHADSG 274

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 91.5 bits (228), Expect = 4e-22
 Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 19/252 (7%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALGIEVIG 65
           +GK  V+   A+ + +  G+A+ +  +GA V ++      +K VD   E L       + 
Sbjct: 29  EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV----KLT 84

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINV 122
           + C VS+ +   N+     E++G +D  V   A +         + T          I+ 
Sbjct: 85  VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISC 144

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEMA 179
            S   +   A P M  G S++ +S     +    +  Y   GV K AL    K LA ++ 
Sbjct: 145 YSFTYIASKAEPLMTNGGSILTLSYYGAEK---VVPHYNVMGVCKAALEASVKYLAVDLG 201

Query: 180 PD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS 238
               RVN ++ G V T  +  +     +    +  + L R  T  ++  A  +L SD   
Sbjct: 202 KQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLGR 261

Query: 239 YITGETLVVAGG 250
             TGET+ V  G
Sbjct: 262 GTTGETVHVDCG 273

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 90.7 bits (226), Expect = 5e-22
 Identities = 58/256 (22%), Positives = 112/256 (43%), Gaps = 26/256 (10%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS---SRKQKNVDKAVEKLKALGIEVIG 65
            GK  +VT  AS   I  G+A+ +  EGA +  +    + +  V++   +L +  +    
Sbjct: 8   SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIV---- 63

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLK-------TKESVLDKLW 118
           + C V+ +     +  +  + + + D FV +    P   D L        T+E       
Sbjct: 64  LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAP--GDQLDGDYVNAVTREGFKIAH- 120

Query: 119 EINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALA 175
           +I+  S + + +     +  GS+++ +S +   +   A+  Y   G+ K +L    + +A
Sbjct: 121 DISSYSFVAMAKACRSMLNPGSALLTLSYLGAER---AIPNYNVMGLAKASLEANVRYMA 177

Query: 176 AEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
             M P+  RVN ++ G + T  A  +     +    E  T + R  T  ++  + AFL S
Sbjct: 178 NAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCS 237

Query: 235 DDASYITGETLVVAGG 250
           D ++ I+GE + V GG
Sbjct: 238 DLSAGISGEVVHVDGG 253

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 90.4 bits (225), Expect = 1e-21
 Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 24/255 (9%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS--SRKQKNVDKAVEKLKALGIEVIGI 66
            GK  ++T   S + I  G+A+ +  EGA +  +   + +  V+K   +          +
Sbjct: 25  AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNP----AAVL 80

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADL------LKTKESVLDKLWEI 120
            C V ++Q  K+L  +  + +  +D  V + A  P    L        T+E       +I
Sbjct: 81  PCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAP-RDQLEGNFIDCVTREGFSIAH-DI 138

Query: 121 NVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAA 176
           +  S   L ++    M+ + +S+V ++ I   +   AM  Y   GV K +L    +  A 
Sbjct: 139 SAYSFAALAKEGRSMMKNRNASMVALTYIGAEK---AMPSYNTMGVAKASLEATVRYTAL 195

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            +  D  +VN V+ G + T  A  +     +       + L +      +   +AFL SD
Sbjct: 196 ALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSD 255

Query: 236 DASYITGETLVVAGG 250
            A+ ITGE + V  G
Sbjct: 256 MATGITGEVVHVDAG 270

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 87.3 bits (217), Expect = 1e-20
 Identities = 62/253 (24%), Positives = 112/253 (44%), Gaps = 20/253 (7%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVISS---RKQKNVDKAVEKLKALGIEVIG 65
           +GK A++T  A+ + I  G+A+    EGA +  +    + +K V +  +   +     + 
Sbjct: 20  EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGS----DLV 75

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAA---DLLKTKESVLDKLWEINV 122
           + C VS ++  KNL     E +G +D+ V + A  P       ++ T         +I+V
Sbjct: 76  VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISV 135

Query: 123 KSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMY---GVTKTALLGLTKALAAEM 178
            S I L ++  P M+ +  ++V +S     +    +  Y   G+ K AL    + LA ++
Sbjct: 136 YSLIALTRELLPLMEGRNGAIVTLSYYGAEK---VVPHYNVMGIAKAALESTVRYLAYDI 192

Query: 179 APD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           A    R+N ++ G V T  A ++ G   + +         +  T  ++     FL SD A
Sbjct: 193 AKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWA 252

Query: 238 SYITGETLVVAGG 250
             ITGE + V  G
Sbjct: 253 RAITGEVVHVDNG 265

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 86.7 bits (215), Expect = 4e-20
 Identities = 48/196 (24%), Positives = 83/196 (42%), Gaps = 14/196 (7%)

Query: 13  KVAVVT-ASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            V ++T  S+ GIGL +A RL     +   V  + R  K   +  E  +AL      +  
Sbjct: 3   TVVLITGCSS-GIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLET 61

Query: 69  H---VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
               V + +      ++  E  GR+DV V NA +      L    E  +  + ++NV  +
Sbjct: 62  LQLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLGP-LEALGEDAVASVLDVNVVGT 118

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DT 182
           + ++Q   P M  +    V+   S+ G        +Y  +K AL GL ++LA  + P   
Sbjct: 119 VRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV 178

Query: 183 RVNCVAPGFVPTHFAQ 198
            ++ +  G V T F +
Sbjct: 179 HLSLIECGPVHTAFME 194

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 78.4 bits (194), Expect = 2e-17
 Identities = 54/276 (19%), Positives = 97/276 (35%), Gaps = 44/276 (15%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIE 62
           M     GK  +V+   +   I   +A     +GA +V++     +  + ++++   L  +
Sbjct: 1   MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGF---DRLRLIQRITDRLPAK 57

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYG---RIDVFVLNAAVNPYAADLLKTKESVLDKLWE 119
              +   V NE+H  +L  +  E  G   ++D  V +    P     +       D  + 
Sbjct: 58  APLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMP--QTGMGINP-FFDAPYA 114

Query: 120 -------INVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY---GVTKTALLG 169
                  I+  S   + +   P M  G S+V +     + P  AM  Y    V K+AL  
Sbjct: 115 DVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD----FDPSRAMPAYNWMTVAKSALES 170

Query: 170 LTKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKAL----------EGKTLLNR 218
           + + +A E      R N VA G + T    A++G     +A           + +  +  
Sbjct: 171 VNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGW 230

Query: 219 LGTT----GNMAAAIAFLASDDASYITGETLVVAGG 250
                            L SD     TG+ +   GG
Sbjct: 231 NMKDATPVAKTVC---ALLSDWLPATTGDIIYADGG 263

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 79.0 bits (195), Expect = 2e-17
 Identities = 64/279 (22%), Positives = 101/279 (36%), Gaps = 40/279 (14%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS------------------------SR 44
           +GK A +   A   G G  VA+ L   GA +++                           
Sbjct: 7   RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPD 66

Query: 45  KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV--------EKYGRIDVFVLN 96
                 K V  L A+      +   V   +      + TV        + +G ID+ V +
Sbjct: 67  GSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHS 126

Query: 97  AAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--P 153
            A  P  +  LL+T           +  S + L+    P M  G + + ++ IA  +  P
Sbjct: 127 LANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP 186

Query: 154 PSAMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAQALLGNDAVRKALE 211
                M    K AL   T+ LA E       RVN ++ G + +  A+A+   D + +   
Sbjct: 187 GYGGGM-SSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMIEYSY 245

Query: 212 GKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
               + +  T   +  A AFL S  AS ITG T+ V  G
Sbjct: 246 NNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 74.8 bits (184), Expect = 7e-16
 Identities = 63/287 (21%), Positives = 103/287 (35%), Gaps = 50/287 (17%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS-----------SRKQKNVDKAVEKLK 57
           +G+ A V   A + G G  +A+ L   GA V +            S +   +D+  +   
Sbjct: 8   RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPD 67

Query: 58  ALGIEVIGII-------------CHVSNEQHRKNLIDKTV--------EKYGRIDVFVLN 96
              IE  G+                + + +    +   T+        +  G ID+ V +
Sbjct: 68  GSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHS 127

Query: 97  AAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS 155
            A  P     LL+T           +  S + L+Q   P M +G S V +S +A  +   
Sbjct: 128 LANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAER--- 184

Query: 156 AMAMY----GVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAQALLGN------ 203
            +  Y       K AL   T+ LA E       RVN ++ G + +  A A+  +      
Sbjct: 185 VVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFI 244

Query: 204 DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG 250
           D           L R   + ++  A  FL S  A  ++G TL V  G
Sbjct: 245 DYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNG 291

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 67.9 bits (166), Expect = 2e-13
 Identities = 62/310 (20%), Positives = 107/310 (34%), Gaps = 71/310 (22%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS--------------------- 42
           +    +GK A V   A + G G  + + L   GA V++                      
Sbjct: 3   LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQD 62

Query: 43  ----------------SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV-- 84
                            +    V   +  L A+      +   VS+ +    +   T+  
Sbjct: 63  SFYAQEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISE 122

Query: 85  ------EKYGRIDVFVLNAAVNPYAADLLK-----TKESVLDKLWEINVKSSILLMQDAA 133
                    G+ID+ V + A      ++ K     +++  L  +   +  S + L+Q   
Sbjct: 123 VAEAVRADVGQIDILVHSLA---NGPEVTKPLLQTSRKGYLAAV-SSSSYSFVSLLQHFL 178

Query: 134 PHMQKGSSVVFISSIAGYQPPSAMAMY----GVTKTALLGLTKALAAEMAPD--TRVNCV 187
           P M++G S + +S IA  +    +  Y       K AL    + LA E       RVNC+
Sbjct: 179 PLMKEGGSALALSYIASEK---VIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCI 235

Query: 188 APGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
           + G + +  A A+         D      E    L +   + ++  A  FL S  A  +T
Sbjct: 236 SAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVT 295

Query: 242 GETLVVAGGM 251
           G TL V  G+
Sbjct: 296 GATLYVDNGL 305

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... Length = 329

 Score = 57.6 bits (139), Expect = 6e-10
 Identities = 51/328 (15%), Positives = 107/328 (32%), Gaps = 95/328 (28%)

Query: 12  GKVAVVT--ASTQGIGLGVAERLGLEGASVVIS-------------------SRKQKNVD 50
             +  +     T G G G+A+ L      ++                     +    + D
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKD 61

Query: 51  KAVEKLKALGIEV-------------IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNA 97
           K +  L  L  +                   ++      +++ +   +KYG+I++ V + 
Sbjct: 62  KKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSL 121

Query: 98  AVNPYAADLLK-----TKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ 152
           A    A ++ K     +++  LD L   +  S I L +     M+  SS++ ++  A  +
Sbjct: 122 A---NAKEVQKDLLNTSRKGYLDAL-SKSSYSLISLCKYFVNIMKPQSSIISLTYHASQK 177

Query: 153 PPSAMAMY----GVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPT------------ 194
               +  Y       K AL   T+ LA  +  +   R+N ++ G + +            
Sbjct: 178 ---VVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT 234

Query: 195 -------------------------------HFAQALLGNDAVRKALEGKTLLNRLGTTG 223
                                            +Q     D   +  E    L +   + 
Sbjct: 235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLST 294

Query: 224 NMAAAIAFLASDDASYITGETLVVAGGM 251
           ++ +  +FL S ++  ITG+T+ V  G+
Sbjct: 295 DIGSVASFLLSRESRAITGQTIYVDNGL 322

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 56.1 bits (136), Expect = 2e-09
 Identities = 40/206 (19%), Positives = 66/206 (32%), Gaps = 42/206 (20%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            +  V+T +  G+G   A  L   GA+V+++ R   +  K     + +  +V      + 
Sbjct: 16  QRTVVITGANSGLGAVTARELARRGATVIMAVR---DTRKGEAAARTMAGQVEVRELDLQ 72

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI----NVKSSIL 127
           +       + +  +     DV + NA +   A     T +      +E     N      
Sbjct: 73  DLSS----VRRFADGVSGADVLINNAGI--MAVPYALTVDG-----FESQIGTNHLGHFA 121

Query: 128 LMQDAAPHMQKGSSVVFISSIA----------------GYQPPSAMAMYGVTKTALLGLT 171
           L     P +     VV +SS+A                 Y P  A   Y  +K A L  T
Sbjct: 122 LTNLLLPRLT--DRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLA---YSQSKLANLLFT 176

Query: 172 KALA---AEMAPDTRVNCVAPGFVPT 194
             L           R     PG+  T
Sbjct: 177 SELQRRLTAAGSPLRALAAHPGYSHT 202

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 52.9 bits (126), Expect = 3e-08
 Identities = 30/233 (12%), Positives = 66/233 (28%), Gaps = 51/233 (21%)

Query: 41  ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN 100
           ++ +   + +  +E L+ L  ++       S   H  N+  +       +   + +    
Sbjct: 187 LNLKNCNSPETVLEMLQKLLYQIDPNWT--SRSDHSSNIKLRIHSIQAELRRLLKS---K 241

Query: 101 PYAADLLKTKESVLDKLW--EI----NVKSSILLM-QDAAPHMQKGSSVV-FISSIAGYQ 152
           PY   LL     VL  +   +     N+   ILL  +           V  F+S+     
Sbjct: 242 PYENCLL-----VLLNVQNAKAWNAFNLSCKILLTTRFK--------QVTDFLSAATTTH 288

Query: 153 PPSAMAMYGVTKTALLGLTKALAAEMAPDT--RVNC-VAPGFVPTHFAQALLGNDAVRKA 209
                    +T   +  L      +  P    R      P    +  A   + +      
Sbjct: 289 ISLDHHSMTLTPDEVKSLL-LKYLDCRPQDLPREVLTTNP-RRLSIIA-ESIRDGLAT-- 343

Query: 210 LEG--KTLLNRLGTTGNMAAAIAFLASDD--ASY-----------ITGETLVV 247
            +       ++L T   + +++  L   +    +           I    L +
Sbjct: 344 WDNWKHVNCDKLTTI--IESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 50.3 bits (120), Expect = 1e-07
 Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 8/93 (8%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
                +GK AVV A T  +G+  A  L  EGA VV+  RK      A + +     +V  
Sbjct: 113 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNV 171

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA 98
                +++  R   +                 A
Sbjct: 172 TAAETADDASRAEAV-------KGAHFVFTAGA 197

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 41.8 bits (98), Expect = 2e-04
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 9   RFQGKVAVVT-ASTQGIGLGVAERLGLEGASVVI-SSR 44
            F+ K  ++T A    IG  V + L   GA VV+ +SR
Sbjct: 473 TFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSR 510

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* Length = 357

 Score = 41.1 bits (97), Expect = 2e-04
 Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 23/132 (17%)

Query: 53  VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD------- 105
           V+ L   GI  I ++ ++ +     NL+D  +  Y   + F++         D       
Sbjct: 63  VKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEEFGDVEAIFHE 122

Query: 106 --LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------Q 152
                T E     + + N + S  L+       ++    ++ SS A Y           +
Sbjct: 123 GACSSTTEWDGKYMMDNNYQYSKELLHYCL---EREIPFLYASSAATYGGRTSDFIESRE 179

Query: 153 PPSAMAMYGVTK 164
               + ++G +K
Sbjct: 180 YEKPLNVFGYSK 191

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	255
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.97
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.96
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.95
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.95
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.94
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.94
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.94
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.94
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.94
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.94
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.93
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.93
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.93
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.93
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.92
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.92
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.92
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.92
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.92
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.92
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.92
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.92
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.91
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.91
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.91
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.91
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.91
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.91
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.9
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.9
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.9
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.9
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.9
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.9
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.9
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.9
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.9
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.89
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.89
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.89
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.89
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.88
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.88
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.86
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.86
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.86
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.86
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.86
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.85
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.85
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.85
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.84
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.82
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.82
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.78
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.77
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.76
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.76
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.75
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.75
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.75
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.74
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.7
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.7
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.69
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.67
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.66
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.55
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.45
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.38
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.12
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	99.0
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.99
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	98.96
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.9
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.83
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.82
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.81
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.76
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.66
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.65
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.64
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.64
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.62
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.61
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.59
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.58
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.56
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.55
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.54
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.53
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.52
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.52
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.51
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	98.46
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.45
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.41
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	98.39
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	98.38
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	98.38
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	98.37
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.36
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.35
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	98.33
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	98.33
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.28
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	98.26
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.26
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	98.26
3gms_A	340	Putative NADPH:quinone reductase; structural genom	98.25
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	98.23
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.22
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	98.19
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	98.18
4eye_A	342	Probable oxidoreductase; structural genomics, niai	98.17
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	98.16
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	98.14
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	98.07
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.07
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	98.04
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	98.03
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.98
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.98
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.96
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.96
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.96
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.95
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.94
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.91
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	97.9
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	97.88
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	97.88
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	97.86
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	97.86
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.83
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.79
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.79
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.79
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	97.77
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.77
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	97.75
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.74
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	97.74
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.7
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.69
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	97.69
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	97.68
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.67
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	97.67
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	97.66
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	97.64
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	97.62
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	97.62
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	97.6
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	97.58
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	97.58
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	97.58
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	97.58
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	97.57
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.57
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	97.55
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	97.51
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	97.51
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	97.49
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	97.49
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	97.48
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	97.47
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	97.45
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	97.45
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	97.44
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	97.44
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	97.44
3tl2_A	315	Malate dehydrogenase; center for structural genomi	97.43
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	97.42
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	97.42
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	97.41
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	97.38
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	97.36
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	97.36
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	97.36
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	97.31
1y6j_A	318	L-lactate dehydrogenase; southeast collaboratory f	97.28
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	97.27
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	97.25
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	97.23
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	97.22
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	97.19
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	97.19
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	97.18
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	97.17
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	97.17
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	97.17
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	97.14
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	97.12
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	97.11
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	97.1
2hjr_A	328	Malate dehydrogenase; malaria, structural genomics	97.1
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	97.05
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	97.04
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	97.04
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	97.04
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	97.03
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.03
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	97.02
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.01
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	97.0
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	96.95
7mdh_A	375	Protein (malate dehydrogenase); chloroplastic mala	96.94
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.91
1a5z_A	319	L-lactate dehydrogenase; oxidoreductase, glycolysi	96.9
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	96.88
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	96.85
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.84
1ldn_A	316	L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA	96.82
2x0j_A	294	Malate dehydrogenase; oxidoreductase, hyperthermop	96.81
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.79
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	96.77
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	96.76
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	96.76
1guz_A	310	Malate dehydrogenase; oxidoreductase, tricarboxyli	96.76
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.74
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	96.74
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	96.7
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	96.68
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	96.59
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.58
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.58
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	96.57
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.53
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	96.51
2d4a_B	308	Malate dehydrogenase; archaea, hyperthermophIle, o	96.51
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	96.5
1t2d_A	322	LDH-P, L-lactate dehydrogenase; ternary complex, o	96.49
1lld_A	319	L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N	96.47
3qha_A	296	Putative oxidoreductase; seattle structural genomi	96.46
3l6d_A	306	Putative oxidoreductase; structural genomics, prot	96.46
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.44
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.42
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.42
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.4
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	96.39
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.37
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	96.32
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	96.32
3qsg_A	312	NAD-binding phosphogluconate dehydrogenase-like P;	96.31
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	96.28
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	96.28
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	96.28
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	96.26
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	96.22
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	96.22
3vh1_A	598	Ubiquitin-like modifier-activating enzyme ATG7; au	96.21
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.2

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=6.9e-62  Score=400.23  Aligned_cols=246  Identities=25%  Similarity=0.399  Sum_probs=236.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++++.+.++.+++||++++++++++++++.++
T Consensus         4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (255)
T 4g81_D            4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAE   83 (255)
T ss_dssp             TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|+||||||+.. ..++.+.++++|++++++|+.|+|+++|++.|+|.   +.|+||++||..+..+.++...|++|
T Consensus        84 ~G~iDiLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~as  162 (255)
T 4g81_D           84 GIHVDILINNAGIQY-RKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAA  162 (255)
T ss_dssp             TCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHH
Confidence            999999999999875 88999999999999999999999999999999993   45899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+|+++.|+++ |||||+|+||+++|+|......+++..+......|++|+.+|+|||++++||+|++++|+||
T Consensus       163 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S~~a~~iTG  242 (255)
T 4g81_D          163 KGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELIGTAIFLSSKASDYING  242 (255)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence            99999999999999999 99999999999999999888888888888899999999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      |+|.+|||++.
T Consensus       243 ~~i~VDGG~~A  253 (255)
T 4g81_D          243 QIIYVDGGWLA  253 (255)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEECCCeEe
Confidence            99999999875

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.8e-61  Score=397.56  Aligned_cols=246  Identities=29%  Similarity=0.469  Sum_probs=229.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||++++++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||+.....++.+.++++|++++++|+.|+|+++|+++|+|+  +.|+||++||..+..+.++...|++||+
T Consensus        83 G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKa  162 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKH  162 (254)
T ss_dssp             SCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHH
T ss_pred             CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHH
Confidence            99999999999875567899999999999999999999999999999995  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH--HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA--VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+.+|+|+++.|+++ |||||+|+||+++|+|......+++  .........|.+|+.+|+|||++++||+|++++|+||
T Consensus       163 al~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~pediA~~v~fLaSd~a~~iTG  242 (254)
T 4fn4_A          163 GLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVNG  242 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999 9999999999999999766544432  2334445578899999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      |+|.+|||+++
T Consensus       243 ~~i~VDGG~t~  253 (254)
T 4fn4_A          243 DAVVVDGGLTV  253 (254)
T ss_dssp             CEEEESTTGGG
T ss_pred             CEEEeCCCccc
Confidence            99999999974

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=8.2e-61  Score=397.25  Aligned_cols=245  Identities=34%  Similarity=0.525  Sum_probs=220.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +|..+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.+...++||++|+++++++++++.
T Consensus        22 ~Ms~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~   98 (273)
T 4fgs_A           22 SMTQRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVK   98 (273)
T ss_dssp             ---CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             hhcchhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHH
Confidence            4566899999999999999999999999999999999999999888877665   6678899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|++|+||||||... ..++.+.++++|++++++|+.|+|+++|+++|+|++.|+||+++|..+..+.++...|++||
T Consensus        99 ~~~G~iDiLVNNAG~~~-~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asK  177 (273)
T 4fgs_A           99 AEAGRIDVLFVNAGGGS-MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASK  177 (273)
T ss_dssp             HHHSCEEEEEECCCCCC-CCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHH
Confidence            99999999999999875 78999999999999999999999999999999999889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-----HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +|+.+|+|+++.|+++ |||||+|+||+++|++.......     +...+......|++|+.+|||||++++||+|++++
T Consensus       178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~FLaSd~a~  257 (273)
T 4fgs_A          178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEVAAAALFLASDDSS  257 (273)
T ss_dssp             HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999 99999999999999987665432     23456677789999999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      |+||++|.+|||+++
T Consensus       258 ~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          258 FVTGAELFVDGGSAQ  272 (273)
T ss_dssp             TCCSCEEEESTTTTT
T ss_pred             CccCCeEeECcChhh
Confidence            999999999999874

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-59  Score=383.79  Aligned_cols=239  Identities=29%  Similarity=0.427  Sum_probs=223.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++++.|+++|++|++++|+.+  ++..+++++.+.++..+.||++|+++++++++     +
T Consensus         5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~-----~   77 (247)
T 4hp8_A            5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFT-----D   77 (247)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSST-----T
T ss_pred             cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHH-----h
Confidence            5799999999999999999999999999999999999865  46677888889999999999999999887764     4


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||+.. ..++.+.++++|++++++|+.|+|+++|++.|+|.   +.|+||++||..+..+.++...|++||
T Consensus        78 g~iDiLVNNAGi~~-~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asK  156 (247)
T 4hp8_A           78 AGFDILVNNAGIIR-RADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAK  156 (247)
T ss_dssp             TCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHH
Confidence            89999999999875 78999999999999999999999999999999984   358999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +|+.+|+|+++.|+++ |||||+|+||+++|+|......++...+......|++|+.+|||||++++||+|++++|+||+
T Consensus       157 aav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG~  236 (247)
T 4hp8_A          157 HGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYVHGA  236 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            9999999999999999 999999999999999998888788788888899999999999999999999999999999999


Q ss_pred             EEeeCCCccCC
Q 025259          244 TLVVAGGMASR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      +|.+|||++.|
T Consensus       237 ~i~VDGG~~Ar  247 (247)
T 4hp8_A          237 ILNVDGGWLAR  247 (247)
T ss_dssp             EEEESTTGGGC
T ss_pred             eEEECcccccC
Confidence            99999999876

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=2.6e-58  Score=380.33  Aligned_cols=244  Identities=27%  Similarity=0.336  Sum_probs=218.0

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |.++|+||++|||||++|||++++++|+++|++|++++|+++..+ ..+++.+.+.++.+++||++++++++++++++.+
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999999999988754 4456667788899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +||++|+||||||+..  ....+.+.++|++.+++|+.++|.++|+++|+|+ .+|+||++||..+..+.++...|++||
T Consensus        80 ~~G~iDiLVNnAGi~~--~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asK  157 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVND--GIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASK  157 (258)
T ss_dssp             HHSCCCEEEECCCCCC--CCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHH
T ss_pred             HhCCCCEEEECCCCCC--CCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHH
Confidence            9999999999999864  3445889999999999999999999999999996 468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----HHHHHHhhccCCCC-CCCChHHHHHHHHHhcCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLLN-RLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +|+.+|+|+++.|+++ |||||+|+||+++|+|.......    +...+......|++ |+.+|||||++++||+|++++
T Consensus       158 aav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~~a~  237 (258)
T 4gkb_A          158 GAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSPRAS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCchhc
Confidence            9999999999999999 99999999999999998765322    23455666778884 899999999999999999999


Q ss_pred             CccccEEeeCCCcc
Q 025259          239 YITGETLVVAGGMA  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      |+|||+|.+|||++
T Consensus       238 ~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          238 HTTGEWLFVDGGYT  251 (258)
T ss_dssp             TCCSCEEEESTTTT
T ss_pred             CccCCeEEECCCcc
Confidence            99999999999987

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=4.2e-58  Score=373.75  Aligned_cols=235  Identities=27%  Similarity=0.425  Sum_probs=211.4

Q ss_pred             cccc-CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKR-FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~-l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..+ ++||++|||||++|||++++++|+++|++|++++|+++.+++      ..+.++..+.||++|+++++++++   
T Consensus         4 f~~dlf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~------~~~~~~~~~~~Dv~~~~~v~~~~~---   74 (242)
T 4b79_A            4 FQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA------PRHPRIRREELDITDSQRLQRLFE---   74 (242)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS------CCCTTEEEEECCTTCHHHHHHHHH---
T ss_pred             CCCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh------hhcCCeEEEEecCCCHHHHHHHHH---
Confidence            3444 599999999999999999999999999999999999876543      235678999999999999877765   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                       ++|++|+||||||+.   .++.+.+.++|++++++|+.|+|+++|++.|+|+ ++|+||++||..+..+.++...|++|
T Consensus        75 -~~g~iDiLVNNAGi~---~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~as  150 (242)
T 4b79_A           75 -ALPRLDVLVNNAGIS---RDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSAS  150 (242)
T ss_dssp             -HCSCCSEEEECCCCC---CGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHH
T ss_pred             -hcCCCCEEEECCCCC---CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHH
Confidence             579999999999974   3678899999999999999999999999999996 56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+|+++.|+++ |||||+|+||+++|+|......+++..+......|++|+.+|+|||++++||+|++++|+||
T Consensus       151 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaSd~a~~iTG  230 (242)
T 4b79_A          151 KGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCGPGASFVTG  230 (242)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCccC
Confidence            99999999999999999 99999999999999999888778888888889999999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||+..
T Consensus       231 ~~l~VDGG~la  241 (242)
T 4b79_A          231 AVLAVDGGYLC  241 (242)
T ss_dssp             CEEEESTTGGG
T ss_pred             ceEEECccHhh
Confidence            99999999864

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.7e-57  Score=375.55  Aligned_cols=246  Identities=24%  Similarity=0.284  Sum_probs=230.6

Q ss_pred             cccCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++.++++.+++++.+ .++.+++||++++++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            5789999999999875  99999999999999999999999999999988888764 57899999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+++|++|+||||||+..   ...++.+.++++|+..+++|+++++.+.+++.++++++|+||++||..+..+.++...|
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y  160 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVM  160 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHH
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhh
Confidence            999999999999999764   13456788999999999999999999999999999989999999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+|+.+|+|+++.|+++ |||||+|+||+++|++.......++..+......|++|+.+|||||+++.||+|++++|
T Consensus       161 ~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~peevA~~v~fL~Sd~a~~  240 (256)
T 4fs3_A          161 GVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQVEVGKTAAYLLSDLSSG  240 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999 99999999999999998877666777888888999999999999999999999999999


Q ss_pred             ccccEEeeCCCcc
Q 025259          240 ITGETLVVAGGMA  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      +||++|.+|||++
T Consensus       241 iTG~~i~VDGG~~  253 (256)
T 4fs3_A          241 VTGENIHVDSGFH  253 (256)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             ccCCEEEECcCHH
Confidence            9999999999997

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=8.4e-57  Score=368.31  Aligned_cols=231  Identities=24%  Similarity=0.369  Sum_probs=211.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||+++|++|+++|++|++++|+++.+++.    .+.+.++.+++||++|+++++++++++.+++|++|
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~----~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD   77 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF----AKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRID   77 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            59999999999999999999999999999999998776554    34466889999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      +||||||... ..++.+.+.++|++++++|+.++|.++|++.|+|+ .+|+||++||..+..+.++...|++||+|+.+|
T Consensus        78 iLVNNAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~l  156 (247)
T 3ged_A           78 VLVNNACRGS-KGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVAL  156 (247)
T ss_dssp             EEEECCCCCC-CCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHH
Confidence            9999999875 78999999999999999999999999999999985 568999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          171 TKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       171 ~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      +|+++.|++++||||+|+||+++|++....      .+......|++|+.+|+|||+++.||+|+  +|+|||+|.+|||
T Consensus       157 tk~lA~ela~~IrVN~I~PG~i~t~~~~~~------~~~~~~~~Pl~R~g~pediA~~v~fL~s~--~~iTG~~i~VDGG  228 (247)
T 3ged_A          157 THALAMSLGPDVLVNCIAPGWINVTEQQEF------TQEDCAAIPAGKVGTPKDISNMVLFLCQQ--DFITGETIIVDGG  228 (247)
T ss_dssp             HHHHHHHHTTTSEEEEEEECSBCCCC---C------CHHHHHTSTTSSCBCHHHHHHHHHHHHHC--SSCCSCEEEESTT
T ss_pred             HHHHHHHHCCCCEEEEEecCcCCCCCcHHH------HHHHHhcCCCCCCcCHHHHHHHHHHHHhC--CCCCCCeEEECcC
Confidence            999999999999999999999999986543      23445678999999999999999999974  6999999999999


Q ss_pred             ccCCC
Q 025259          251 MASRL  255 (255)
Q Consensus       251 ~~~~~  255 (255)
                      ++.|+
T Consensus       229 ~s~r~  233 (247)
T 3ged_A          229 MSKRM  233 (247)
T ss_dssp             GGGCC
T ss_pred             HHHhC
Confidence            99875

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=4.7e-55  Score=361.87  Aligned_cols=235  Identities=25%  Similarity=0.326  Sum_probs=208.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++.          ..+..+++||++++++++++++++.+++
T Consensus         7 ~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   76 (261)
T 4h15_A            7 LNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG----------LPEELFVEADLTTKEGCAIVAEATRQRL   76 (261)
T ss_dssp             CCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT----------SCTTTEEECCTTSHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC----------CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            378999999999999999999999999999999999986421          1233468999999999999999999999


Q ss_pred             CCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCC-CChhhHHh
Q 025259           88 GRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPS-AMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~-~~~~y~~s  163 (255)
                      |++|+||||||... ...++.+.++++|++++++|++++++++|+++|+|+  +.|+||++||..+..+.+ +...|++|
T Consensus        77 G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~as  156 (261)
T 4h15_A           77 GGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAA  156 (261)
T ss_dssp             SSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHH
T ss_pred             CCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHH
Confidence            99999999999753 245789999999999999999999999999999995  568999999999998876 57899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--------C----HHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--------N----DAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--------~----~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      |+|+.+|+|+++.|+++ |||||+|+||+++|++......        +    ++.........|++|+.+|||||+++.
T Consensus       157 Kaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peevA~~v~  236 (261)
T 4h15_A          157 KAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEEVANLIA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence            99999999999999999 9999999999999998754321        1    223445567789999999999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCcc
Q 025259          231 FLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ||+|++++|+||++|.+|||..
T Consensus       237 fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          237 FLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHhCchhcCccCcEEEECCcCc
Confidence            9999999999999999999974

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=5e-53  Score=352.78  Aligned_cols=248  Identities=25%  Similarity=0.417  Sum_probs=233.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.+|++|+++++++++++.++
T Consensus        21 ~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  100 (271)
T 4ibo_A           21 IFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQ  100 (271)
T ss_dssp             GGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            46799999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||
T Consensus       101 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK  179 (271)
T 4ibo_A          101 GIDVDILVNNAGIQF-RKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAK  179 (271)
T ss_dssp             TCCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHH
Confidence            999999999999875 67889999999999999999999999999999985  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+++ |||||+|+||+++|++.......++..++.....|.+++.+|+|+|++++||+++.+.++||+
T Consensus       180 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~  259 (271)
T 4ibo_A          180 GGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVGTAVFLSASASDYVNGQ  259 (271)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCc
Confidence            9999999999999998 999999999999999987765556677777888999999999999999999999999999999


Q ss_pred             EEeeCCCccCCC
Q 025259          244 TLVVAGGMASRL  255 (255)
Q Consensus       244 ~i~~dgG~~~~~  255 (255)
                      +|.+|||.+..|
T Consensus       260 ~i~vdGG~~~~l  271 (271)
T 4ibo_A          260 IIYVDGGMLSVL  271 (271)
T ss_dssp             EEEESTTGGGBC
T ss_pred             EEEECCCeeccC
Confidence            999999998765

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=1.9e-52  Score=346.49  Aligned_cols=247  Identities=34%  Similarity=0.531  Sum_probs=229.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.+|++|+++++++++++.+
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   85 (256)
T 3gaf_A            6 SPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALD   85 (256)
T ss_dssp             CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|+||||||... ..++ +.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        86 ~~g~id~lv~nAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (256)
T 3gaf_A           86 QFGKITVLVNNAGGGG-PKPF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSS  163 (256)
T ss_dssp             HHSCCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHH
Confidence            9999999999999875 5566 899999999999999999999999999985  35799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+++++|+++++.|+++ |||||+|+||+++|++..... .++..+......|.+++.+|+|+|++++||+++.+.++||
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~~~dva~~~~~L~s~~~~~itG  242 (256)
T 3gaf_A          164 KAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL-TPEIERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISG  242 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC-CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc-CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcccCccC
Confidence            99999999999999998 999999999999999987654 4556667778889999999999999999999999999999


Q ss_pred             cEEeeCCCccCCC
Q 025259          243 ETLVVAGGMASRL  255 (255)
Q Consensus       243 ~~i~~dgG~~~~~  255 (255)
                      ++|.+|||...+|
T Consensus       243 ~~i~vdgG~~~~~  255 (256)
T 3gaf_A          243 QVLTVSGGGVQEL  255 (256)
T ss_dssp             CEEEESTTSCCC-
T ss_pred             CEEEECCCccccC
Confidence            9999999998764

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.3e-52  Score=349.43  Aligned_cols=247  Identities=28%  Similarity=0.458  Sum_probs=231.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.||++|+++++++++++.
T Consensus        14 ~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   93 (266)
T 4egf_A           14 GVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAA   93 (266)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999999888876 57889999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +++|++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++   .++||++||..+..+.++...|+
T Consensus        94 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  172 (266)
T 4egf_A           94 EAFGGLDVLVNNAGISH-PQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYC  172 (266)
T ss_dssp             HHHTSCSEEEEECCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHH
Confidence            99999999999999875 678899999999999999999999999999999853   57999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++.......+..........|.+++.+|+|+|++++||+++.+.++
T Consensus       173 asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~i  252 (266)
T 4egf_A          173 TSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVSDAVVWLASDAASMI  252 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            9999999999999999998 999999999999999988776666677777888999999999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      ||++|.+|||+++
T Consensus       253 tG~~i~vdGG~~~  265 (266)
T 4egf_A          253 NGVDIPVDGGYTM  265 (266)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEECCCccC
Confidence            9999999999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=2.6e-52  Score=347.20  Aligned_cols=250  Identities=26%  Similarity=0.405  Sum_probs=229.6

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .|+..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++|+++++++++++.
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (264)
T 3ucx_A            4 SMGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETM   83 (264)
T ss_dssp             ---CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            35567899999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +++|++|+||||||......++.+.+.++|++++++|+.+++.+++++.|+|+ .+++||++||..+..+.++...|++|
T Consensus        84 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  163 (264)
T 3ucx_A           84 KAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMA  163 (264)
T ss_dssp             HHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHH
T ss_pred             HHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHH
Confidence            99999999999999865577899999999999999999999999999999985 35899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      |+++++|+++++.|+++ |||||+|+||+++|++......         .++..+......|.+++.+|+|+|++++||+
T Consensus       164 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~  243 (264)
T 3ucx_A          164 KSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTEDEVASAILFMA  243 (264)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSSCCBHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCcccCCCHHHHHHHHHHHc
Confidence            99999999999999998 9999999999999998765431         2445666777889999999999999999999


Q ss_pred             CCCCCCccccEEeeCCCccCC
Q 025259          234 SDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++.+.++||++|.+|||.++.
T Consensus       244 s~~~~~itG~~i~vdGG~~~~  264 (264)
T 3ucx_A          244 SDLASGITGQALDVNCGEYKA  264 (264)
T ss_dssp             SGGGTTCCSCEEEESTTSSCC
T ss_pred             CccccCCCCCEEEECCCccCC
Confidence            999999999999999998763

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=6.1e-52  Score=344.64  Aligned_cols=246  Identities=32%  Similarity=0.483  Sum_probs=228.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+ .++.++.+|++|+++++++++++
T Consensus         3 ~~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (262)
T 3pk0_A            3 GSMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRA   82 (262)
T ss_dssp             CCTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence            34578999999999999999999999999999999999999999999999998776 68999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y  160 (255)
                      .+++|++|+||||||... ..++.+.++++|++++++|+.+++.++++++|+|+  +.++||++||..+. .+.++...|
T Consensus        83 ~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y  161 (262)
T 3pk0_A           83 VEEFGGIDVVCANAGVFP-DAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHY  161 (262)
T ss_dssp             HHHHSCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHH
T ss_pred             HHHhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhh
Confidence            999999999999999875 67889999999999999999999999999999985  56899999999986 788899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+++++|+++++.|+++ |||||+|+||+++|++....  .++..+......|.+++.+|+|+|+++.||+++++.+
T Consensus       162 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~  239 (262)
T 3pk0_A          162 GATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN--GEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGY  239 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999998 99999999999999987653  4556677778889999999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +||++|.+|||.++
T Consensus       240 itG~~i~vdGG~~~  253 (262)
T 3pk0_A          240 ITGQAIAVDGGQVL  253 (262)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCEEEECCCeec
Confidence            99999999999875

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.9e-52  Score=345.29  Aligned_cols=245  Identities=30%  Similarity=0.489  Sum_probs=222.2

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         2 ~m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   78 (255)
T 4eso_A            2 VMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQ   78 (255)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHH
Confidence            356799999999999999999999999999999999999998888877665   55789999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      .+|++|+||||||... ..++.+.++++|++.+++|+.+++.+++++.|+|+++++||++||..+..+.++...|++||+
T Consensus        79 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  157 (255)
T 4eso_A           79 TLGAIDLLHINAGVSE-LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKA  157 (255)
T ss_dssp             HHSSEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHH
T ss_pred             HhCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHH
Confidence            9999999999999875 778899999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH----HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND----AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      ++++|+++++.|+++ |||||+|+||+++|++.......+    ...+......|.+++.+|+|+|+.++||+++ +.++
T Consensus       158 a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~-~~~i  236 (255)
T 4eso_A          158 ALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVARAVLFLAFE-ATFT  236 (255)
T ss_dssp             HHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHHT-CTTC
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCc-CcCc
Confidence            999999999999998 999999999999999865422222    2334455668999999999999999999998 8999


Q ss_pred             cccEEeeCCCccCCC
Q 025259          241 TGETLVVAGGMASRL  255 (255)
Q Consensus       241 ~G~~i~~dgG~~~~~  255 (255)
                      ||++|.+|||++.+|
T Consensus       237 tG~~i~vdGG~~~~l  251 (255)
T 4eso_A          237 TGAKLAVDGGLGQKL  251 (255)
T ss_dssp             CSCEEEESTTTTTTB
T ss_pred             cCCEEEECCCccccC
Confidence            999999999998764

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.5e-52  Score=344.61  Aligned_cols=246  Identities=24%  Similarity=0.360  Sum_probs=223.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCC-eEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGI-EVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~-~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+. ++.++.||++|+++++++++++.+
T Consensus         4 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   83 (265)
T 3lf2_A            4 YDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACER   83 (265)
T ss_dssp             CCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence            578999999999999999999999999999999999999999999988877 443 599999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        84 ~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  162 (265)
T 3lf2_A           84 TLGCASILVNNAGQGR-VSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAA  162 (265)
T ss_dssp             HHCSCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHH
Confidence            9999999999999875 778999999999999999999999999999999964  5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-------C-HHHHHHhhc--cCCCCCCCChHHHHHHHHHh
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-------N-DAVRKALEG--KTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-------~-~~~~~~~~~--~~~~~~~~~~~~va~~~~~l  232 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|++......       . .........  ..|.+++.+|+|+|++++||
T Consensus       163 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL  242 (265)
T 3lf2_A          163 RAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIEAARAILFL  242 (265)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHHHHHHHHHH
Confidence            99999999999999999 9999999999999999876543       1 122222222  27899999999999999999


Q ss_pred             cCCCCCCccccEEeeCCCccCC
Q 025259          233 ASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.+.++||++|.+|||+++.
T Consensus       243 ~s~~~~~itG~~i~vdGG~~~~  264 (265)
T 3lf2_A          243 ASPLSAYTTGSHIDVSGGLSRH  264 (265)
T ss_dssp             HSGGGTTCCSEEEEESSSCCCC
T ss_pred             hCchhcCcCCCEEEECCCCcCC
Confidence            9999999999999999999864

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=1e-51  Score=344.71  Aligned_cols=248  Identities=27%  Similarity=0.451  Sum_probs=224.9

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ..++.++++|++|||||++|||++++++|+++|++|+++++ +.+.+++..+++++.+.++.++.||++|++++++++++
T Consensus        10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            34556799999999999999999999999999999998766 46677888888888888999999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC-ccCCCCCChhhH
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA-GYQPPSAMAMYG  161 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~-~~~~~~~~~~y~  161 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++.++||++||.. +..+.++...|+
T Consensus        90 ~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~  168 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVS-FGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYS  168 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHH
T ss_pred             HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhH
Confidence            9999999999999999875 77889999999999999999999999999999998889999999988 567888999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh----------cCCHHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL----------LGNDAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      +||+++++|+++++.|+++ |||||+|+||+++|++....          ...++..+......|.+++.+|+|+|++++
T Consensus       169 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~  248 (270)
T 3is3_A          169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHRNGWPQDVANVVG  248 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence            9999999999999999998 99999999999999987642          223445556667789999999999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCcc
Q 025259          231 FLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ||+++.+.++||++|.+|||+.
T Consensus       249 ~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          249 FLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHcCCccCCccCcEEEeCCCCC
Confidence            9999999999999999999974

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=1.5e-51  Score=341.58  Aligned_cols=243  Identities=31%  Similarity=0.452  Sum_probs=227.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++|++|||||++|||++++++|+++|++|+++ +|+.+.+++..+++++.+.++.++.+|++|+++++++++++.+++|+
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            58999999999999999999999999999886 99999999999999888889999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..+.++...|++||+++
T Consensus        83 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~  161 (258)
T 3oid_A           83 LDVFVNNAASGV-LRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAAL  161 (258)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHH
Confidence            999999999865 778899999999999999999999999999999964  46999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++|+++++.|+++ +||||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++.+.++||++|.
T Consensus       162 ~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~  241 (258)
T 3oid_A          162 EALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSKADMIRGQTII  241 (258)
T ss_dssp             HHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHHHHHHHTSSTTTTCCSCEEE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCccCCEEE
Confidence            9999999999998 999999999999999988765555666777778899999999999999999999999999999999


Q ss_pred             eCCCccCC
Q 025259          247 VAGGMASR  254 (255)
Q Consensus       247 ~dgG~~~~  254 (255)
                      +|||.+..
T Consensus       242 vdGG~~~~  249 (258)
T 3oid_A          242 VDGGRSLL  249 (258)
T ss_dssp             ESTTGGGB
T ss_pred             ECCCccCC
Confidence            99998753

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=7.8e-52  Score=345.38  Aligned_cols=248  Identities=32%  Similarity=0.511  Sum_probs=229.0

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .+|+.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++++
T Consensus        20 ~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           20 GSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             ---CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            35667899999999999999999999999999999999999999999999999888888999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus       100 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQ-DQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYA  178 (270)
T ss_dssp             HHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHH
Confidence            999999999999999875 67888999999999999999999999999999884  568999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++....  .++.........|.+++.+|+|+|++++||+++...++
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  256 (270)
T 3ftp_A          179 AAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL--PQEQQTALKTQIPLGRLGSPEDIAHAVAFLASPQAGYI  256 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCCCcCCc
Confidence            9999999999999999998 99999999999999998764  34556667778899999999999999999999999999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||++|.+|||..++
T Consensus       257 tG~~i~vdGG~~~s  270 (270)
T 3ftp_A          257 TGTTLHVNGGMFMS  270 (270)
T ss_dssp             CSCEEEESTTSSCC
T ss_pred             cCcEEEECCCcccC
Confidence            99999999998753

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.2e-51  Score=346.25  Aligned_cols=250  Identities=31%  Similarity=0.406  Sum_probs=230.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~   81 (255)
                      .|.+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.   ++.++.+|++|+++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            466789999999999999999999999999999999999999999999999987765   89999999999999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChh
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      ++.+.+|++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  163 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGA  163 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTH
T ss_pred             HHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChh
Confidence            99999999999999999854467889999999999999999999999999999985  4579999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++||+++++|+++++.|+++ +||||+|+||+++|++........+..+......|.+++.+|+|+|++++||+++...
T Consensus       164 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~~~l~s~~~~  243 (281)
T 3svt_A          164 YGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVANMAMFLLSDAAS  243 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccC
Confidence            999999999999999999998 9999999999999999887666666777777888999999999999999999999999


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      ++||++|.+|||.+.+
T Consensus       244 ~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          244 FVTGQVINVDGGQMLR  259 (281)
T ss_dssp             TCCSCEEEESTTGGGS
T ss_pred             CCCCCEEEeCCChhcc
Confidence            9999999999998865

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.8e-52  Score=346.72  Aligned_cols=249  Identities=29%  Similarity=0.435  Sum_probs=227.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|.++++|++|||||++|||++++++|+++|++|++++|+.+.++++.+++.+.+.++.++.+|++++++++++++++.+
T Consensus         2 ~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (280)
T 3tox_A            2 VMSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVR   81 (280)
T ss_dssp             --CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35679999999999999999999999999999999999999999999999988788999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y~~  162 (255)
                      ++|++|+||||||......++.+.+.++|++.+++|+.|++.++++++|+|+  +.++||++||..+. .+.++...|++
T Consensus        82 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  161 (280)
T 3tox_A           82 RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAA  161 (280)
T ss_dssp             HHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHH
T ss_pred             HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHH
Confidence            9999999999999875467889999999999999999999999999999986  45799999999998 78889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc--CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL--GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ||+|+++|+++++.|+++ |||||+|+||+++|++.....  ..++.........|.+++.+|+|+|++++||+++.+.+
T Consensus       162 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~a~~  241 (280)
T 3tox_A          162 SKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEIAEAALYLASDGASF  241 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999988 999999999999999876532  23455666777889999999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||.+.+
T Consensus       242 itG~~i~vdGG~~~~  256 (280)
T 3tox_A          242 VTGAALLADGGASVT  256 (280)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCcEEEECCCcccc
Confidence            999999999998753

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=9.8e-52  Score=340.75  Aligned_cols=242  Identities=33%  Similarity=0.500  Sum_probs=222.2

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++..   +..++.+|++|+++++++++++.+
T Consensus         3 ~~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~   79 (248)
T 3op4_A            3 QFMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITD   79 (248)
T ss_dssp             CTTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999988887777643   477899999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|+||||||+.. ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        80 ~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (248)
T 3op4_A           80 EFGGVDILVNNAGITR-DNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAA  158 (248)
T ss_dssp             HHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHH
Confidence            9999999999999875 67889999999999999999999999999999984  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|++....  .++.........|.+++.+|+|+|+.+.||+++++.++||
T Consensus       159 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~~~~~itG  236 (248)
T 3op4_A          159 KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL--NDEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITG  236 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccC
Confidence            99999999999999998 99999999999999987654  3445556667789999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||.++
T Consensus       237 ~~i~vdgG~~~  247 (248)
T 3op4_A          237 ETLHVNGGMYM  247 (248)
T ss_dssp             CEEEESTTSSC
T ss_pred             cEEEECCCeec
Confidence            99999999864

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.1e-52  Score=347.84  Aligned_cols=248  Identities=26%  Similarity=0.395  Sum_probs=220.3

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  101 (283)
T 3v8b_A           22 SMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVL  101 (283)
T ss_dssp             -----CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34678999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC--CCCCChhhH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ--PPSAMAMYG  161 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~--~~~~~~~y~  161 (255)
                      ++|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..  +.++...|+
T Consensus       102 ~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~  181 (283)
T 3v8b_A          102 KFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYT  181 (283)
T ss_dssp             HHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHH
T ss_pred             HhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHH
Confidence            9999999999999875457899999999999999999999999999999985  468999999999987  778899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH-----HHHhhccCCC--CCCCChHHHHHHHHHhc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV-----RKALEGKTLL--NRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~va~~~~~l~  233 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++........+.     .+......|.  +++.+|+|||++++||+
T Consensus       182 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~  261 (283)
T 3v8b_A          182 ATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV  261 (283)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHc
Confidence            9999999999999999998 99999999999999997654322222     1223344556  88999999999999999


Q ss_pred             CCCCCCccccEEeeCCCccC
Q 025259          234 SDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.+.++||++|.+|||.++
T Consensus       262 s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          262 SERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             SGGGTTCCSCEEEESTTHHH
T ss_pred             CccccCCcCCEEEECcCccc
Confidence            99999999999999999863

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=3e-51  Score=344.56  Aligned_cols=249  Identities=27%  Similarity=0.379  Sum_probs=220.5

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC----------------hhHHHHHHHHHHHcCCeEEEEEe
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK----------------QKNVDKAVEKLKALGIEVIGIIC   68 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~----------------~~~~~~~~~~~~~~~~~~~~~~~   68 (255)
                      .|+.++++|++|||||++|||++++++|+++|++|++++|+                .+.+++..+++...+.++.++.|
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV   83 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence            46678999999999999999999999999999999999887                67788888888888889999999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEE
Q 025259           69 HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFI  145 (255)
Q Consensus        69 D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~v  145 (255)
                      |++|+++++++++++.+++|++|+||||||+.....++.+.+.++|++++++|+.+++.++++++|+|++   .++||++
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILT  163 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence            9999999999999999999999999999998764445889999999999999999999999999999853   5799999


Q ss_pred             cCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----------CCH-HHH--HHh
Q 025259          146 SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----------GND-AVR--KAL  210 (255)
Q Consensus       146 ss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----------~~~-~~~--~~~  210 (255)
                      ||..+..+.++...|++||+++++|+++++.|+++ |||||+|+||+++|++.....           ... +..  ...
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (286)
T 3uve_A          164 SSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQM  243 (286)
T ss_dssp             CCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHT
T ss_pred             CchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHHh
Confidence            99999999999999999999999999999999998 999999999999999875310           111 111  123


Q ss_pred             hccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          211 EGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       211 ~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ....| +++.+|+|+|++++||+++.+.++||++|.+|||++++
T Consensus       244 ~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          244 FHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             TCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            44556 88999999999999999999999999999999999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.6e-51  Score=344.35  Aligned_cols=247  Identities=28%  Similarity=0.456  Sum_probs=229.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++|.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+ .++.++.||++|+++++++++++
T Consensus        34 ~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  113 (293)
T 3rih_A           34 KVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTV  113 (293)
T ss_dssp             CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999999999999999999999988776 68999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y  160 (255)
                      .+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+. .+.++...|
T Consensus       114 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  192 (293)
T 3rih_A          114 VDAFGALDVVCANAGIFP-EARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHY  192 (293)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHH
Confidence            999999999999999875 67889999999999999999999999999999985  46899999999986 788899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+++++|+++++.|+++ |||||+|+||+++|++....  .++..+......|.+++.+|+|+|+.+.||+++.+.+
T Consensus       193 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~a~~  270 (293)
T 3rih_A          193 GASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDM--GEEYISGMARSIPMGMLGSPVDIGHLAAFLATDEAGY  270 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHT--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhc--cHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            99999999999999999998 99999999999999987654  3456677778889999999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||.+++
T Consensus       271 itG~~i~vdGG~~~~  285 (293)
T 3rih_A          271 ITGQAIVVDGGQVLP  285 (293)
T ss_dssp             CCSCEEEESTTTTCB
T ss_pred             CCCCEEEECCCccCC
Confidence            999999999998753

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=1.5e-51  Score=341.65  Aligned_cols=247  Identities=31%  Similarity=0.488  Sum_probs=211.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++++++|++|||||++|||++++++|+++|++|+++ .++.+..++..+++++.+.++.++.||++|+++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            367899999999999999999999999999999988 6777788888888888888899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChhhHHhH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVTK  164 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~y~~sK  164 (255)
                      ++|++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|++.++||++||..+. .+.++...|++||
T Consensus        83 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK  162 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSK  162 (259)
T ss_dssp             HHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHH
T ss_pred             HhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHH
Confidence            999999999999987447788999999999999999999999999999999878899999999998 7888999999999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       165 aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++++|+++++.|++++||||+|+||+++|++...... ++..+......|.+++.+|+|+|+.+.||+++.+.++||++
T Consensus       163 aa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~~~~itG~~  241 (259)
T 3edm_A          163 GAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK-PEVRERVAGATSLKREGSSEDVAGLVAFLASDDAAYVTGAC  241 (259)
T ss_dssp             HHHHHHHHHHHHHHTTTCEEEEEEECCBCC-----------------------CCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC-hHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCCE
Confidence            99999999999999888999999999999999766532 34455666778899999999999999999999999999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      |.+|||....
T Consensus       242 i~vdGg~~~~  251 (259)
T 3edm_A          242 YDINGGVLFS  251 (259)
T ss_dssp             EEESBCSSBC
T ss_pred             EEECCCcCCC
Confidence            9999998753

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.4e-51  Score=346.47  Aligned_cols=247  Identities=27%  Similarity=0.405  Sum_probs=224.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC--hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK--QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+  .+..++..+.+++.+.++.++.||++|+++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999987  345667777777778899999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+++++||++||..+..+.++...|++||
T Consensus       124 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  203 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATK  203 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHH
Confidence            99999999999999865456788999999999999999999999999999998889999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++++.++||+
T Consensus       204 aa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~  283 (294)
T 3r3s_A          204 AAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAE  283 (294)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCC
Confidence            9999999999999998 999999999999999854433334444556677889999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||.++
T Consensus       284 ~i~vdGG~~l  293 (294)
T 3r3s_A          284 VHGVCGGEHL  293 (294)
T ss_dssp             EEEESTTCCC
T ss_pred             EEEECCCccC
Confidence            9999999875

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.3e-51  Score=341.79  Aligned_cols=245  Identities=27%  Similarity=0.431  Sum_probs=222.1

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ++...++++|++|||||++|||++++++|+++|++|++++++ .+.+++..+++++.+.++.++.+|++|++++++++++
T Consensus        23 mm~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~  102 (271)
T 3v2g_A           23 MMTSISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRE  102 (271)
T ss_dssp             HHTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            334457899999999999999999999999999999988665 5677888888888888999999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-CCCChhhH
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-PSAMAMYG  161 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-~~~~~~y~  161 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+ .++...|+
T Consensus       103 ~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~  181 (271)
T 3v2g_A          103 TVEALGGLDILVNSAGIWH-SAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYS  181 (271)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHH
T ss_pred             HHHHcCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHH
Confidence            9999999999999999875 778899999999999999999999999999999988899999999877665 78899999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+++++|+++++.|+++ |||||+|+||+++|++.....   +..+......|.+++.+|+|+|+++.||+++.+.++
T Consensus       182 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~r~~~pedvA~~v~fL~s~~~~~i  258 (271)
T 3v2g_A          182 ASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG---DHAEAQRERIATGSYGEPQDIAGLVAWLAGPQGKFV  258 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC---SSHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc---hhHHHHHhcCCCCCCCCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999998 999999999999999875432   223445567789999999999999999999999999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      ||++|.+|||.+
T Consensus       259 tG~~i~vdGG~~  270 (271)
T 3v2g_A          259 TGASLTIDGGAN  270 (271)
T ss_dssp             CSCEEEESTTTT
T ss_pred             cCCEEEeCcCcc
Confidence            999999999986

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=4.9e-51  Score=338.59  Aligned_cols=245  Identities=29%  Similarity=0.439  Sum_probs=222.3

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ||.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++|+++++++++++.+
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~   78 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVE   78 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHH
Confidence            567899999999999999999999999999999999999998888877666   55788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++   .++||++||..+..+.++...|++
T Consensus        79 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           79 HAGGLDILVNNAALFD-LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             HSSSCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            9999999999999875 678899999999999999999999999999999853   579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                      ||+++++|+++++.|+++ +||||+|+||+++|++.....         ...+..+......|.+++.+|+|+|+++.||
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L  237 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFL  237 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHH
Confidence            999999999999999998 999999999999999876541         1334455566778999999999999999999


Q ss_pred             cCCCCCCccccEEeeCCCccCC
Q 025259          233 ASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.+.++||++|.+|||.+++
T Consensus       238 ~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          238 ASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TSGGGTTCCSCEEEESTTSSCC
T ss_pred             hCCccCCCCCCEEEECcChhcC
Confidence            9999999999999999998763

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=8.6e-51  Score=343.84  Aligned_cols=249  Identities=29%  Similarity=0.437  Sum_probs=221.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHHcCCeEEEEEecCCC
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------------QKNVDKAVEKLKALGIEVIGIICHVSN   72 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~   72 (255)
                      .|+.++++|++|||||++|||++++++|+++|++|++++|+            .+.+++..++++..+.++.++.||++|
T Consensus        21 ~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~  100 (299)
T 3t7c_A           21 SMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRD  100 (299)
T ss_dssp             -CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             ccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence            46678999999999999999999999999999999999987            677888888888888899999999999


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcC
Q 025259           73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIA  149 (255)
Q Consensus        73 ~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~  149 (255)
                      +++++++++++.+.+|++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|.   +.++||++||..
T Consensus       101 ~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~  180 (299)
T 3t7c_A          101 FDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIG  180 (299)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChh
Confidence            99999999999999999999999999876444588999999999999999999999999999874   357999999999


Q ss_pred             ccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----------CC-HH--HHHHhhccC
Q 025259          150 GYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----------GN-DA--VRKALEGKT  214 (255)
Q Consensus       150 ~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----------~~-~~--~~~~~~~~~  214 (255)
                      +..+.++...|++||+|+++|+++++.|+++ |||||+|+||+++|++.....           .. ..  .........
T Consensus       181 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (299)
T 3t7c_A          181 GLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVL  260 (299)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHHSSS
T ss_pred             hccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhhccc
Confidence            9999999999999999999999999999999 999999999999999864311           00 11  111233445


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          215 LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       215 ~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      | +++.+|+|||++++||+++++.++||++|.+|||.++|
T Consensus       261 p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          261 P-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             C-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            5 78999999999999999999999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=8.6e-51  Score=339.56  Aligned_cols=248  Identities=27%  Similarity=0.403  Sum_probs=224.9

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |..+.++++|++|||||++|||++++++|+++|++|++++|+ +.+++..+++.+.+.++.++.+|++|+++++++.+. 
T Consensus        23 m~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-  100 (273)
T 3uf0_A           23 MTGPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-  100 (273)
T ss_dssp             --CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-
Confidence            444567899999999999999999999999999999999965 566777888888888999999999999999999544 


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .++++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus       101 ~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~  179 (273)
T 3uf0_A          101 LAATRRVDVLVNNAGIIA-RAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYA  179 (273)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHH
T ss_pred             HHhcCCCcEEEECCCCCC-CCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHH
Confidence            456799999999999875 67889999999999999999999999999999985  558999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++.+.++
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v~~L~s~~a~~i  259 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGPAVFLASDAASYV  259 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            9999999999999999998 999999999999999988776667777777788899999999999999999999999999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||++|.+|||.+.+
T Consensus       260 tG~~i~vdGG~~~s  273 (273)
T 3uf0_A          260 HGQVLAVDGGWLAS  273 (273)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCCEEEECcCccCC
Confidence            99999999998753

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=2.3e-51  Score=338.28  Aligned_cols=243  Identities=29%  Similarity=0.439  Sum_probs=219.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.||++|+++++++++++.+.
T Consensus         1 ~~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~   77 (247)
T 3rwb_A            1 TERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQAL   77 (247)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998888877766   668999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++   .++||++||..+..+.++...|++|
T Consensus        78 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  156 (247)
T 3rwb_A           78 TGGIDILVNNASIVP-FVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAA  156 (247)
T ss_dssp             HSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHH
Confidence            999999999999875 778899999999999999999999999999999852   5799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|++....... ..........+.+++.+|+|+|+.+.||+++.+.++||
T Consensus       157 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~r~~~pedva~~v~~L~s~~~~~itG  235 (247)
T 3rwb_A          157 KGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHN-EAFGFVEMLQAMKGKGQPEHIADVVSFLASDDARWITG  235 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGG-GGHHHHHHHSSSCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChh-HHHHHHhcccccCCCcCHHHHHHHHHHHhCccccCCCC
Confidence            99999999999999998 99999999999999987654322 12222223368889999999999999999999999999


Q ss_pred             cEEeeCCCccCC
Q 025259          243 ETLVVAGGMASR  254 (255)
Q Consensus       243 ~~i~~dgG~~~~  254 (255)
                      ++|.+|||+.++
T Consensus       236 ~~i~vdGG~~~~  247 (247)
T 3rwb_A          236 QTLNVDAGMVRH  247 (247)
T ss_dssp             CEEEESTTSSCC
T ss_pred             CEEEECCCccCC
Confidence            999999998764

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.8e-51  Score=340.65  Aligned_cols=242  Identities=29%  Similarity=0.468  Sum_probs=214.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.+++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..++++..+.++.++.||++++++++++++++.+.
T Consensus        23 m~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  102 (267)
T 3u5t_A           23 MMETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEA  102 (267)
T ss_dssp             ----CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            34679999999999999999999999999999887 56677888888888888889999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.+++.+++++.|+|++.++||++||..+..+.++...|++||+|
T Consensus       103 ~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (267)
T 3u5t_A          103 FGGVDVLVNNAGIMP-LTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAG  181 (267)
T ss_dssp             HSCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHH
Confidence            999999999999875 7788999999999999999999999999999999878899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ |||||+|+||+++|++..... .++..+......|.+++.+|+|+|+++.||+++.+.++||++|
T Consensus       182 ~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i  260 (267)
T 3u5t_A          182 VEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK-SDEVRDRFAKLAPLERLGTPQDIAGAVAFLAGPDGAWVNGQVL  260 (267)
T ss_dssp             HHHHHHHHHHHTTTSCCEEEEEEECCBC------------CHHHHHTSSTTCSCBCHHHHHHHHHHHHSTTTTTCCSEEE
T ss_pred             HHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEE
Confidence            99999999999998 999999999999999875532 2334556677789999999999999999999999999999999


Q ss_pred             eeCCCc
Q 025259          246 VVAGGM  251 (255)
Q Consensus       246 ~~dgG~  251 (255)
                      .+|||+
T Consensus       261 ~vdGG~  266 (267)
T 3u5t_A          261 RANGGI  266 (267)
T ss_dssp             EESSSC
T ss_pred             EeCCCc
Confidence            999996

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=6.8e-51  Score=338.98  Aligned_cols=244  Identities=28%  Similarity=0.479  Sum_probs=212.3

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +..|.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~   95 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL---GKDVFVFSANLSDRKSIKQLAEVA   95 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEeecCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999998887765544   668999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+.++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        96 ~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~  174 (266)
T 3grp_A           96 EREMEGIDILVNNAGITR-DGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYC  174 (266)
T ss_dssp             HHHHTSCCEEEECCCCC------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHH
T ss_pred             HHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHH
Confidence            999999999999999875 67888999999999999999999999999999984  567999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++....  .++..+......|.+++.+|+|+|++++||+++++.++
T Consensus       175 asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~~~~i  252 (266)
T 3grp_A          175 AAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL--NEKQKEAIMAMIPMKRMGIGEEIAFATVYLASDEAAYL  252 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCc
Confidence            9999999999999999998 99999999999999998754  44556677788899999999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      ||++|.+|||+++
T Consensus       253 tG~~i~vdGG~~~  265 (266)
T 3grp_A          253 TGQTLHINGGMAM  265 (266)
T ss_dssp             CSCEEEESTTC--
T ss_pred             cCCEEEECCCeee
Confidence            9999999999863

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=5.3e-51  Score=341.56  Aligned_cols=247  Identities=26%  Similarity=0.408  Sum_probs=218.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHHHHHcCCeEEEEEecCC
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-------------KQKNVDKAVEKLKALGIEVIGIICHVS   71 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~   71 (255)
                      .|+.++++|++|||||++|||++++++|+++|++|++++|             +.+.+++..++++..+.++.++.+|++
T Consensus         4 ~m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~   83 (277)
T 3tsc_A            4 SMAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR   83 (277)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC
Confidence            4667899999999999999999999999999999999998             677788888888888889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCc
Q 025259           72 NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSI  148 (255)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~  148 (255)
                      |+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++   .++||++||.
T Consensus        84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           84 DFDRLRKVVDDGVAALGRLDIIVANAGVAA-PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             CHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            999999999999999999999999999875 678889999999999999999999999999999853   5799999999


Q ss_pred             CccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCC
Q 025259          149 AGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNR  218 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~  218 (255)
                      .+..+.++...|++||+++++|+++++.|+++ |||||+|+||+++|++.....         ..++.........|. +
T Consensus       163 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-r  241 (277)
T 3tsc_A          163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPD-W  241 (277)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSSC-S
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccCC-C
Confidence            99999999999999999999999999999998 999999999999999865311         111111222233444 7


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +.+|+|+|++++||+++++.++||++|.+|||.+.
T Consensus       242 ~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          242 VAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            89999999999999999999999999999999864

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.5e-50  Score=339.09  Aligned_cols=243  Identities=29%  Similarity=0.441  Sum_probs=223.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.||++|+++++++++++.+++|+
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHh--ccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP--HMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|  .|+  ..++||++||..+..+.++...|++||+
T Consensus       102 id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKa  180 (279)
T 3sju_A          102 IGILVNSAGRNG-GGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKH  180 (279)
T ss_dssp             CCEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHH
Confidence            999999999875 67889999999999999999999999999999  564  4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      |+++|+++++.|+++ |||||+|+||+++|++.....         ..++..+......|.+++.+|+|+|+++.||+++
T Consensus       181 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  260 (279)
T 3sju_A          181 GVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPLGRYSTPEEVAGLVGYLVTD  260 (279)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc
Confidence            999999999999998 999999999999999976532         2345667777888999999999999999999999


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      .+.++||++|.+|||++.
T Consensus       261 ~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          261 AAASITAQALNVCGGLGN  278 (279)
T ss_dssp             GGGGCCSCEEEESTTCCC
T ss_pred             cccCcCCcEEEECCCccC
Confidence            999999999999999864

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-50  Score=339.50  Aligned_cols=248  Identities=25%  Similarity=0.352  Sum_probs=219.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------------QKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      .|.++++|++|||||++|||++++++|+++|++|++++|+            .+.+++..++++..+.++.++.+|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            4568999999999999999999999999999999999997            5677777788888888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY  151 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~  151 (255)
                      ++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+.
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~  162 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGIST-IALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGH  162 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCC-CCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc
Confidence            9999999999999999999999999875 67889999999999999999999999999999984  56899999999999


Q ss_pred             CCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----------CC-HHHHH--HhhccCCC
Q 025259          152 QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----------GN-DAVRK--ALEGKTLL  216 (255)
Q Consensus       152 ~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----------~~-~~~~~--~~~~~~~~  216 (255)
                      .+.++...|++||+++++|+++++.|+++ |||||+|+||+++|++.....           .. .....  ......+ 
T Consensus       163 ~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  241 (281)
T 3s55_A          163 SANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQY-  241 (281)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSSS-
T ss_pred             CCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhccC-
Confidence            99999999999999999999999999998 999999999999999865311           00 01111  1223334 


Q ss_pred             CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +++.+|+|+|++++||+++.+.++||++|.+|||.+.+|
T Consensus       242 ~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~~  280 (281)
T 3s55_A          242 APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATARM  280 (281)
T ss_dssp             CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccCC
Confidence            789999999999999999999999999999999998775

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.5e-51  Score=343.18  Aligned_cols=247  Identities=25%  Similarity=0.410  Sum_probs=202.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .||.++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.||++|+++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999985 777888888898888889999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCC-CCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCCC
Q 025259           84 VEKYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~~  157 (255)
                      .+++|++|+||||||.. ....++.+.+.++|++++++|+.+++.++++++|+|++     .++||++||..+..+.++.
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            99999999999999983 23567889999999999999999999999999999853     5699999999999999999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhc-cCCCCCCCChHHHHHHHHHhcCC
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEG-KTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ..|++||+|+++|+++++.|+++ +||||+|+||+++|++......  ........ ..|.+++.+|+|||++++||+++
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  259 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG--KYDGLIESGLVPMRRWGEPEDIGNIVAGLAGG  259 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CCBCHHHHHHHHHHHHTS
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch--hHHHHHhhcCCCcCCcCCHHHHHHHHHHHhCc
Confidence            99999999999999999999998 9999999999999998765432  22222333 67889999999999999999999


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      .+.++||++|.+|||.++
T Consensus       260 ~~~~itG~~i~vdGG~~~  277 (280)
T 4da9_A          260 QFGFATGSVIQADGGLSI  277 (280)
T ss_dssp             TTGGGTTCEEEESTTCC-
T ss_pred             cccCCCCCEEEECCCccc
Confidence            999999999999999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=7.3e-51  Score=340.52  Aligned_cols=242  Identities=29%  Similarity=0.485  Sum_probs=222.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.++.++.||++|+++++++++++.+++
T Consensus        28 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~  107 (276)
T 3r1i_A           28 FDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL  107 (276)
T ss_dssp             GCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            57899999999999999999999999999999999999999999999998888899999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCC--CCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPP--SAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~--~~~~~y~~  162 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++   .++||++||..+..+.  ++...|++
T Consensus       108 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~a  186 (276)
T 3r1i_A          108 GGIDIAVCNAGIVS-VQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCT  186 (276)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHH
Confidence            99999999999875 678889999999999999999999999999999853   3789999999987654  36788999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +||||+|+||+++|++.....   +..+......|.+++.+|+|+|++++||+++.+.++|
T Consensus       187 sKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~---~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~~~~it  263 (276)
T 3r1i_A          187 SKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA---DYHALWEPKIPLGRMGRPEELTGLYLYLASAASSYMT  263 (276)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG---GGHHHHGGGSTTSSCBCGGGSHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch---HHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCcc
Confidence            999999999999999998 999999999999999986542   2345566778999999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||++.
T Consensus       264 G~~i~vdGG~~~  275 (276)
T 3r1i_A          264 GSDIVIDGGYTC  275 (276)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CcEEEECcCccC
Confidence            999999999874

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=5.2e-51  Score=338.11  Aligned_cols=246  Identities=25%  Similarity=0.386  Sum_probs=222.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.||++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999999999988778899999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-c--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-Q--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+| +  ..++||++||..+..+.++...|++||
T Consensus        82 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  160 (257)
T 3imf_A           82 GRIDILINNAAGNF-ICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAK  160 (257)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHH
Confidence            99999999999865 6788999999999999999999999999999998 3  358999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC-C-CcEEEEEeCCcccChhhhhhc-CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          165 TALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAQALL-GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       165 aa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +|+++|+++++.|++ + |||||+|+||+++|++..... ..++..+......|.+++.+|+|+|+.++||+++.+.++|
T Consensus       161 aa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~it  240 (257)
T 3imf_A          161 AGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEEIAGLAYYLCSDEAAYIN  240 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCcc
Confidence            999999999999997 6 999999999999998754321 1122334456678899999999999999999999999999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||.+++
T Consensus       241 G~~i~vdGG~~~~  253 (257)
T 3imf_A          241 GTCMTMDGGQHLH  253 (257)
T ss_dssp             SCEEEESTTTTSC
T ss_pred             CCEEEECCCcccC
Confidence            9999999999865

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1.1e-50  Score=342.82  Aligned_cols=250  Identities=22%  Similarity=0.268  Sum_probs=223.6

Q ss_pred             ccccccCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      +..++++++|++|||||+|  |||++++++|+++|++|++++|+++..+...+..++.+ ++.++.||++|+++++++++
T Consensus        22 m~~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~  100 (296)
T 3k31_A           22 MRTGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFK  100 (296)
T ss_dssp             CCCCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHH
T ss_pred             ccchhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHH
Confidence            3445678999999999997  99999999999999999999999876655555444444 46889999999999999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCCh
Q 025259           82 KTVEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~  158 (255)
                      ++.+++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++..
T Consensus       101 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~  180 (296)
T 3k31_A          101 VLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYN  180 (296)
T ss_dssp             HHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTT
T ss_pred             HHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCch
Confidence            999999999999999998641   26788999999999999999999999999999998889999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|++||+|+++|+++++.|+++ |||||+|+||+++|++...........+......|.+++.+|+|+|++++||+++.+
T Consensus       181 ~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a  260 (296)
T 3k31_A          181 VMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLDDVGGAALYLLSDLG  260 (296)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCcc
Confidence            9999999999999999999998 999999999999999876543334556667777899999999999999999999999


Q ss_pred             CCccccEEeeCCCccCC
Q 025259          238 SYITGETLVVAGGMASR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      .++||++|.+|||++.+
T Consensus       261 ~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          261 RGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCccCCEEEECCCcccc
Confidence            99999999999998754

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=2.6e-51  Score=340.86  Aligned_cols=246  Identities=22%  Similarity=0.344  Sum_probs=212.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC---hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK---QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .++++++|++|||||++|||++++++|+++|++|++++|.   .+.+++..+++++.+.++.++.||++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999998764   4567778888888888999999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++...|++
T Consensus        85 ~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~a  163 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVL-KKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAG  163 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCC-SSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC---
T ss_pred             HHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHH
Confidence            9999999999999999875 678889999999999999999999999999999987889999999999988889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+|+++|+++++.|+++ +||||+|+||+++|++..... .++..+......|.+++.+|+|+|+.++||+++ +.++|
T Consensus       164 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~-~~~it  241 (262)
T 3ksu_A          164 NKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE-TKESTAFHKSQAMGNQLTKIEDIAPIIKFLTTD-GWWIN  241 (262)
T ss_dssp             --CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC-------------CCCCSCCGGGTHHHHHHHHTT-TTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC-chHHHHHHHhcCcccCCCCHHHHHHHHHHHcCC-CCCcc
Confidence            999999999999999998 999999999999999976543 233445556667889999999999999999999 89999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||....
T Consensus       242 G~~i~vdGg~~~~  254 (262)
T 3ksu_A          242 GQTIFANGGYTTR  254 (262)
T ss_dssp             SCEEEESTTCCCC
T ss_pred             CCEEEECCCccCC
Confidence            9999999998753

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=1.9e-50  Score=332.61  Aligned_cols=241  Identities=34%  Similarity=0.545  Sum_probs=223.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|+++++ +.+.+++..++++..+.++.++.+|++|+++++++++++.+++|
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45899999999999999999999999999998877 56778888888888888999999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||++
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (246)
T 3osu_A           82 SLDVLVNNAGITR-DNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHH
Confidence            9999999999875 67889999999999999999999999999999984  56799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ |||||+|+||+++|++....  .++..+......|.+++.+|+|+|+++.||+++...++||++|
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~itG~~i  238 (246)
T 3osu_A          161 VIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL--SDELKEQMLTQIPLARFGQDTDIANTVAFLASDKAKYITGQTI  238 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS--CHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEE
Confidence            99999999999998 99999999999999987654  3556677778889999999999999999999999999999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      ++|||+++
T Consensus       239 ~vdgG~~~  246 (246)
T 3osu_A          239 HVNGGMYM  246 (246)
T ss_dssp             EESTTSCC
T ss_pred             EeCCCccC
Confidence            99999864

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=2.9e-50  Score=339.36  Aligned_cols=247  Identities=26%  Similarity=0.439  Sum_probs=225.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+. .+...+.++..+.++.++.+|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999764 4556666667788999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++...|++||+
T Consensus       122 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  201 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKG  201 (291)
T ss_dssp             HHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHH
T ss_pred             HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHH
Confidence            99999999999998754567888999999999999999999999999999988899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++++|+++++.|+++ |||||+|+||+++|++..... ..+..+......|.+++.+|+|+|++++||+++...++||++
T Consensus       202 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~p~~r~~~p~dvA~~v~~L~s~~~~~itG~~  280 (291)
T 3ijr_A          202 AIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF-DEKKVSQFGSNVPMQRPGQPYELAPAYVYLASSDSSYVTGQM  280 (291)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS-CHHHHHHTTTTSTTSSCBCGGGTHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC-CHHHHHHHHccCCCCCCcCHHHHHHHHHHHhCCccCCCcCCE
Confidence            999999999999998 999999999999999976544 344556667778999999999999999999999999999999


Q ss_pred             EeeCCCccCC
Q 025259          245 LVVAGGMASR  254 (255)
Q Consensus       245 i~~dgG~~~~  254 (255)
                      |.+|||.++.
T Consensus       281 i~vdGG~~~~  290 (291)
T 3ijr_A          281 IHVNGGVIVN  290 (291)
T ss_dssp             EEESSSCCCC
T ss_pred             EEECCCcccC
Confidence            9999998753

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.8e-50  Score=338.96  Aligned_cols=249  Identities=24%  Similarity=0.387  Sum_probs=214.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .+++++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++... +.++.++.+|++|++++++++++
T Consensus        18 ~~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   97 (281)
T 3v2h_A           18 LYFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAM   97 (281)
T ss_dssp             ----CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHH
T ss_pred             hhhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHH
Confidence            3467899999999999999999999999999999999999 667778888888765 67899999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|
T Consensus        98 ~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  176 (281)
T 3v2h_A           98 VADRFGGADILVNNAGVQF-VEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAY  176 (281)
T ss_dssp             HHHHTSSCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHH
T ss_pred             HHHHCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHH
Confidence            9999999999999999875 67888999999999999999999999999999985  45799999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH----------HHHHHhhccCCCCCCCChHHHHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND----------AVRKALEGKTLLNRLGTTGNMAAAI  229 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~va~~~  229 (255)
                      ++||+++++|+++++.|+++ |||||+|+||+++|++........          ...+......|.+++.+|+|+|+++
T Consensus       177 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v  256 (281)
T 3v2h_A          177 VAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVEQVASLA  256 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHHHHHHHH
Confidence            99999999999999999998 999999999999999876543221          1122345567889999999999999


Q ss_pred             HHhcCCCCCCccccEEeeCCCccCC
Q 025259          230 AFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +||+++.+.++||++|.+|||++.+
T Consensus       257 ~~L~s~~a~~itG~~i~vdGG~~~q  281 (281)
T 3v2h_A          257 LYLAGDDAAQITGTHVSMDGGWTAQ  281 (281)
T ss_dssp             HHHHSSGGGGCCSCEEEESTTGGGC
T ss_pred             HHHcCCCcCCCCCcEEEECCCccCC
Confidence            9999999999999999999998764

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=8.9e-51  Score=340.11  Aligned_cols=244  Identities=34%  Similarity=0.495  Sum_probs=216.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+++
T Consensus        25 ~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           25 PDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             --CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            4789999999999999999999999999999999999998888877766   6678899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||+
T Consensus       102 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKa  180 (277)
T 3gvc_A          102 GGVDKLVANAGVVH-LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKA  180 (277)
T ss_dssp             SSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHH
Confidence            99999999999875 67888999999999999999999999999999984  5679999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC--HHHHHHhhc---cCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN--DAVRKALEG---KTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++++|+++++.|+++ |||||+|+||+++|++.......  .........   ..|.+++.+|+|+|++++||+++++.+
T Consensus       181 a~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~a~~  260 (277)
T 3gvc_A          181 GIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAPEEMAGIVVFLLSDDASM  260 (277)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCHHHHHHHHHHHcCCccCC
Confidence            999999999999998 99999999999999997654331  111111111   345688999999999999999999999


Q ss_pred             ccccEEeeCCCccCCC
Q 025259          240 ITGETLVVAGGMASRL  255 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~~  255 (255)
                      +||++|.+|||.+..+
T Consensus       261 itG~~i~vdGG~~~~~  276 (277)
T 3gvc_A          261 ITGTTQIADGGTIAAL  276 (277)
T ss_dssp             CCSCEEEESTTGGGSC
T ss_pred             ccCcEEEECCcchhcc
Confidence            9999999999998754

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.3e-50  Score=337.91  Aligned_cols=242  Identities=31%  Similarity=0.498  Sum_probs=222.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++| +.+.+++..++++..+.++.++.+|++|+++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999888 67778888888888888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus       103 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  181 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITR-DTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAA  181 (269)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHH
Confidence            9999999999999875 67888999999999999999999999999999985  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC-CCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~-~~~~~~  241 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|++....     ..+......|.+++.+|+|+|+++.||+++ .+.++|
T Consensus       182 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-----~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~~~~~~it  256 (269)
T 4dmm_A          182 KAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-----AAEKLLEVIPLGRYGEAAEVAGVVRFLAADPAAAYIT  256 (269)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-----HHHHHGGGCTTSSCBCHHHHHHHHHHHHHCGGGGGCC
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-----cHHHHHhcCCCCCCCCHHHHHHHHHHHhCCcccCCCc
Confidence            99999999999999998 99999999999999986543     235566778999999999999999999998 788999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||+++.
T Consensus       257 G~~i~vdGG~~~s  269 (269)
T 4dmm_A          257 GQVINIDGGLVMA  269 (269)
T ss_dssp             SCEEEESTTSCCC
T ss_pred             CCEEEECCCeecC
Confidence            9999999998763

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.8e-50  Score=338.31  Aligned_cols=246  Identities=27%  Similarity=0.344  Sum_probs=225.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.. .+.++.++.+|++++++++++++++.++
T Consensus        23 ~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~  102 (277)
T 4fc7_A           23 DLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKE  102 (277)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            458999999999999999999999999999999999999998888888865 4778999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||
T Consensus       103 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (277)
T 4fc7_A          103 FGRIDILINCAAGNF-LCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAK  181 (277)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHH
T ss_pred             cCCCCEEEECCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHH
Confidence            999999999999765 67888999999999999999999999999999884  468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh-cCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL-LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +|+++|+++++.|+++ |||||+|+||+++|++.... ..............|.+++.+|+|+|++++||+++.+.++||
T Consensus       182 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~fL~s~~~~~itG  261 (277)
T 4fc7_A          182 AAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIAHSVLYLASPLASYVTG  261 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHHHHHHHHcCCccCCcCC
Confidence            9999999999999998 99999999999999865433 334555666777889999999999999999999999999999


Q ss_pred             cEEeeCCCccCC
Q 025259          243 ETLVVAGGMASR  254 (255)
Q Consensus       243 ~~i~~dgG~~~~  254 (255)
                      ++|.+|||.++.
T Consensus       262 ~~i~vdGG~~~~  273 (277)
T 4fc7_A          262 AVLVADGGAWLT  273 (277)
T ss_dssp             CEEEESTTHHHH
T ss_pred             CEEEECCCcccC
Confidence            999999998754

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-50  Score=335.11  Aligned_cols=243  Identities=28%  Similarity=0.447  Sum_probs=219.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .|+.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~   80 (271)
T 3tzq_B            4 SMTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTI   80 (271)
T ss_dssp             ---CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHH
Confidence            4567899999999999999999999999999999999999999888877766   5678889999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +++|++|+||||||... ...++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        81 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  160 (271)
T 3tzq_B           81 DTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYA  160 (271)
T ss_dssp             HHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHH
T ss_pred             HHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHH
Confidence            99999999999999863 255678899999999999999999999999999985  457999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+++++|+++++.|+++ |||||+|+||+++|++..... .++..+......+.+++.+|+|+|+.++||+++.+.++
T Consensus       161 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~i  239 (271)
T 3tzq_B          161 CTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLAGRIGEPHEIAELVCFLASDRAAFI  239 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999999999999998 999999999999999876433 34566777788899999999999999999999999999


Q ss_pred             cccEEeeCCCc
Q 025259          241 TGETLVVAGGM  251 (255)
Q Consensus       241 ~G~~i~~dgG~  251 (255)
                      ||++|.+|||.
T Consensus       240 tG~~i~vdGG~  250 (271)
T 3tzq_B          240 TGQVIAADSGL  250 (271)
T ss_dssp             CSCEEEESTTT
T ss_pred             CCCEEEECCCc
Confidence            99999999994

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=6.2e-50  Score=335.06  Aligned_cols=244  Identities=28%  Similarity=0.495  Sum_probs=220.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+.
T Consensus        22 ~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           22 SMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999999999998887776654   667899999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|++  .++||++||..+..+.++...|++||
T Consensus        99 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  177 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGT-TGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASK  177 (277)
T ss_dssp             HSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHH
Confidence            999999999999875 678899999999999999999999999999999964  46999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc----CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +|+++|+++++.|+++ |||||+|+||+++|++.....    .............|.+++.+|+|+|++++||+++.+.+
T Consensus       178 aa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~s~~~~~  257 (277)
T 4dqx_A          178 GAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAEEIAEAMLFLASDRSRF  257 (277)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHHHHHHHHHHHhCCccCC
Confidence            9999999999999998 999999999999999844322    11233344677789999999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||.+..
T Consensus       258 itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          258 ATGSILTVDGGSSIG  272 (277)
T ss_dssp             CCSCEEEESSSSSSC
T ss_pred             CcCCEEEECCchhhh
Confidence            999999999998754

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-50  Score=339.21  Aligned_cols=245  Identities=28%  Similarity=0.391  Sum_probs=222.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +++.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.+|++++++++++++++.
T Consensus        26 ~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~  105 (275)
T 4imr_A           26 ETIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAE  105 (275)
T ss_dssp             HHHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHH
T ss_pred             cccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence            44567999999999999999999999999999999999999999999999998888899999999999999999999998


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +. +++|+||||||... ..++.+.++++|++++++|+.|++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus       106 ~~-g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  183 (275)
T 4imr_A          106 AI-APVDILVINASAQI-NATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAA  183 (275)
T ss_dssp             HH-SCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             Hh-CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHH
Confidence            87 99999999999875 67889999999999999999999999999999984  5689999999999998888899999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhcc-CCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGK-TLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ||+|+++|+++++.|+++ +||||+|+||+++|++...... .++........ .|.+++.+|+|+|++++||+++++.+
T Consensus       184 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~~a~~  263 (275)
T 4imr_A          184 TKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVGAALFLASEACSF  263 (275)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHHHHHHHcCcccCC
Confidence            999999999999999998 9999999999999998765432 23333333333 38999999999999999999999999


Q ss_pred             ccccEEeeCCCc
Q 025259          240 ITGETLVVAGGM  251 (255)
Q Consensus       240 ~~G~~i~~dgG~  251 (255)
                      +||++|.+|||+
T Consensus       264 itG~~i~vdGG~  275 (275)
T 4imr_A          264 MTGETIFLTGGY  275 (275)
T ss_dssp             CCSCEEEESSCC
T ss_pred             CCCCEEEeCCCC
Confidence            999999999995

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=4.3e-50  Score=338.59  Aligned_cols=247  Identities=21%  Similarity=0.246  Sum_probs=216.4

Q ss_pred             cccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |.++++|++|||||+  +|||++++++|+++|++|++++|+++..+.. +++.+...++.++.||++|+++++++++++.
T Consensus        26 ~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  104 (293)
T 3grk_A           26 SGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLE  104 (293)
T ss_dssp             -CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHH
Confidence            456899999999999  5599999999999999999999996544443 3333333468899999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +++|++|+||||||+...   ..++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++...|+
T Consensus       105 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~  184 (293)
T 3grk_A          105 KKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMG  184 (293)
T ss_dssp             HHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHH
T ss_pred             HhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHH
Confidence            999999999999998642   46788999999999999999999999999999998889999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++.......++..+......|.+++.+|+|+|++++||+++.+.++
T Consensus       185 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~i  264 (293)
T 3grk_A          185 VAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIDEVGDVGLYFLSDLSRSV  264 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence            9999999999999999998 999999999999999987665545666777788899999999999999999999999999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||++|.+|||++.+
T Consensus       265 tG~~i~vdGG~~~~  278 (293)
T 3grk_A          265 TGEVHHADSGYHVI  278 (293)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             cceEEEECCCcccC
Confidence            99999999998753

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-50  Score=338.42  Aligned_cols=247  Identities=25%  Similarity=0.372  Sum_probs=217.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-------------ChhHHHHHHHHHHHcCCeEEEEEecCC
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-------------KQKNVDKAVEKLKALGIEVIGIICHVS   71 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~~~~~~~~~~D~~   71 (255)
                      .+|.++++|++|||||++|||++++++|+++|++|++++|             +.+.+++..++++..+.++.++.+|++
T Consensus         8 ~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~   87 (280)
T 3pgx_A            8 GQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVR   87 (280)
T ss_dssp             ---CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred             ccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCC
Confidence            3556899999999999999999999999999999999998             677888888888888889999999999


Q ss_pred             CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCc
Q 025259           72 NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSI  148 (255)
Q Consensus        72 ~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~  148 (255)
                      |+++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++   .++||++||.
T Consensus        88 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~  166 (280)
T 3pgx_A           88 DDAALRELVADGMEQFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSS  166 (280)
T ss_dssp             CHHHHHHHHHHHHHHHCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCG
T ss_pred             CHHHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcch
Confidence            999999999999999999999999999876 678899999999999999999999999999999852   5789999999


Q ss_pred             CccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH------HHH--hhccCCCCCC
Q 025259          149 AGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV------RKA--LEGKTLLNRL  219 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~------~~~--~~~~~~~~~~  219 (255)
                      .+..+.++...|++||+++++|+++++.|+++ |||||+|+||+++|++..........      .+.  .....|. ++
T Consensus       167 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-r~  245 (280)
T 3pgx_A          167 AGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPN-GF  245 (280)
T ss_dssp             GGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBCS-SC
T ss_pred             hhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCCC-CC
Confidence            99999999999999999999999999999998 99999999999999986532100000      000  1122334 68


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+|+|+|+.++||+++.+.++||++|.+|||.+.
T Consensus       246 ~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          246 MTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             BCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             CCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence            8999999999999999999999999999999864

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-49  Score=327.13  Aligned_cols=242  Identities=30%  Similarity=0.475  Sum_probs=226.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++++.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999999999999999999999988888999999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||++
T Consensus        82 ~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (247)
T 3lyl_A           82 AIDILVNNAGITR-DNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAG  160 (247)
T ss_dssp             CCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHH
Confidence            9999999999875 67788999999999999999999999999999884  55799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ +|+||+|+||+++|++....  .++.........|.+++.+|+|+|+.+.||++++..+++|++|
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~s~~~~~~tG~~i  238 (247)
T 3lyl_A          161 VIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL--TDEQKSFIATKIPSGQIGEPKDIAAAVAFLASEEAKYITGQTL  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS--CHHHHHHHHTTSTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc--cHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhCCCcCCccCCEE
Confidence            99999999999998 99999999999999997654  3455666777889999999999999999999999999999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||+++
T Consensus       239 ~vdgG~~~  246 (247)
T 3lyl_A          239 HVNGGMYM  246 (247)
T ss_dssp             EESTTSSC
T ss_pred             EECCCEec
Confidence            99999875

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=1.6e-49  Score=330.55  Aligned_cols=249  Identities=25%  Similarity=0.310  Sum_probs=225.8

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      |++++++|++|||||+  +|||++++++|+++|++|++++|+.+..+...+..++.+. ++.++.||+++++++++++++
T Consensus         1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            4567899999999999  6699999999999999999999997666665555555544 789999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           83 TVEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +.+.++++|+||||||....   ..++.+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++...
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  160 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNV  160 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHH
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcch
Confidence            99999999999999998642   357788999999999999999999999999999988899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++||+|+++|+++++.|+++ ||+||+|+||+++|++.......++.........|.+++.+|+|+|+.++||+++...
T Consensus       161 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~~v~~l~s~~~~  240 (266)
T 3oig_A          161 MGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEEVGDTAAFLFSDMSR  240 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCCchh
Confidence            999999999999999999998 9999999999999999877655556667777788999999999999999999999999


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      ++||++|.+|||++.+
T Consensus       241 ~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          241 GITGENLHVDSGFHIT  256 (266)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cCcCCEEEECCCeEEe
Confidence            9999999999999864

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-49  Score=331.11  Aligned_cols=245  Identities=30%  Similarity=0.532  Sum_probs=221.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.||++++++++++++++.+
T Consensus         1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   80 (262)
T 1zem_A            1 MSKKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVR   80 (262)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            34578899999999999999999999999999999999999999888888887777899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++|
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  160 (262)
T 1zem_A           81 DFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTS  160 (262)
T ss_dssp             HHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             HhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHH
Confidence            9999999999999862366788999999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh------------cC-CHH-HHHHhhccCCCCCCCChHHHHHH
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL------------LG-NDA-VRKALEGKTLLNRLGTTGNMAAA  228 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~------------~~-~~~-~~~~~~~~~~~~~~~~~~~va~~  228 (255)
                      |+++++|+++++.|+++ +||||+|+||+++|++....            .. .++ ..+......|.+++.+|+|+|+.
T Consensus       161 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~  240 (262)
T 1zem_A          161 KGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGV  240 (262)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence            99999999999999998 99999999999999987653            22 233 44445566788999999999999


Q ss_pred             HHHhcCCCCCCccccEEeeCCC
Q 025259          229 IAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       229 ~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      +.||+++.+.++||++|.+|||
T Consensus       241 v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          241 VAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHcCchhcCcCCcEEecCCC
Confidence            9999999999999999999998

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.2e-49  Score=331.57  Aligned_cols=245  Identities=29%  Similarity=0.467  Sum_probs=216.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...  +..+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            456899999999999999999999999999999999999999999998888775  4678899999999999877654  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                        +++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        82 --~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  158 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFE-PVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYS  158 (267)
T ss_dssp             --HCCCCSEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHH
T ss_pred             --hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHH
Confidence              5789999999999875 67888999999999999999999999999999985  457999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHH----HHhhccCCCCCCCChHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVR----KALEGKTLLNRLGTTGNMAA  227 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~----~~~~~~~~~~~~~~~~~va~  227 (255)
                      +||+++++|+++++.|+++ +||||+|+||+++|++......         .++..    .......|.+++.+|+|||+
T Consensus       159 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~  238 (267)
T 3t4x_A          159 ATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEEIAH  238 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHHHHH
Confidence            9999999999999999998 9999999999999997654311         11111    22223457899999999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +++||+++.+.++||++|.+|||.+.++
T Consensus       239 ~v~fL~s~~~~~itG~~i~vdGG~~~si  266 (267)
T 3t4x_A          239 LVTFLSSPLSSAINGSALRIDGGLVRSV  266 (267)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCSCSC
T ss_pred             HHHHHcCccccCccCCeEEECCCccccc
Confidence            9999999999999999999999998764

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=4.7e-49  Score=326.82  Aligned_cols=246  Identities=31%  Similarity=0.502  Sum_probs=223.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999999999988888888777889999999999999999999999999


Q ss_pred             -CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 -GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                       +++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++||
T Consensus        85 ~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (260)
T 2ae2_A           85 HGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  163 (260)
T ss_dssp             TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHH
Confidence             89999999999865 66788899999999999999999999999999985  347999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHH---HhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRK---ALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      ++++.|+++++.|+++ +|+||+|.||+++|++.......+...+   ......|.+++.+|+|+|+.+.||+++...++
T Consensus       164 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~~  243 (260)
T 2ae2_A          164 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  243 (260)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCccccCC
Confidence            9999999999999998 9999999999999998765443333222   44556788899999999999999999988999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|+++.+|||...+
T Consensus       244 tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          244 TGQIIYVDGGLMAN  257 (260)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998754

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=1.7e-49  Score=328.11  Aligned_cols=238  Identities=22%  Similarity=0.329  Sum_probs=213.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecC--CCHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHV--SNEQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~~   83 (255)
                      ...+++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ .++.++.+|+  +++++++++++++
T Consensus         7 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (252)
T 3f1l_A            7 QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRI   86 (252)
T ss_dssp             TTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHH
Confidence            356899999999999999999999999999999999999999999988887654 4788899999  9999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+.+|++|+||||||......++.+.++++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        87 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~  166 (252)
T 3f1l_A           87 AVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYA  166 (252)
T ss_dssp             HHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhH
Confidence            999999999999999865467889999999999999999999999999999995  457999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +||+++++|+++++.|+++.||||+|+||+++|++.....+.          .+..++.+|+|+|+.++||+++.+.++|
T Consensus       167 asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~~~~----------~~~~~~~~p~dva~~~~~L~s~~~~~it  236 (252)
T 3f1l_A          167 ASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPT----------EDPQKLKTPADIMPLYLWLMGDDSRRKT  236 (252)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHHCTT----------CCGGGSBCTGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhhCCc----------cchhccCCHHHHHHHHHHHcCccccCCC
Confidence            999999999999999998889999999999999987654321          1234578999999999999999999999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||....
T Consensus       237 G~~i~vdgG~~~~  249 (252)
T 3f1l_A          237 GMTFDAQPGRKPG  249 (252)
T ss_dssp             SCEEESSCC----
T ss_pred             CCEEEeCCCcCCC
Confidence            9999999998753

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-49  Score=329.57  Aligned_cols=245  Identities=31%  Similarity=0.491  Sum_probs=217.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++++++++++++++.+.+
T Consensus        17 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   96 (273)
T 1ae1_A           17 WSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVF   96 (273)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999999999988888888777889999999999999999999999999


Q ss_pred             -CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 -GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++||
T Consensus        97 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  175 (273)
T 1ae1_A           97 DGKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASK  175 (273)
T ss_dssp             TSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHH
Confidence             89999999999865 66788999999999999999999999999999985  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +++++|+++++.|+++ +||||+|+||+++|++......    ..+..+......|.+++.+|+|+|+.+.||+++...+
T Consensus       176 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~~  255 (273)
T 1ae1_A          176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY  255 (273)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999998 9999999999999998754332    2333444555678899999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|++|.+|||.+.
T Consensus       256 ~tG~~i~vdGG~~~  269 (273)
T 1ae1_A          256 ITGQIIWADGGFTA  269 (273)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             cCCCEEEECCCccc
Confidence            99999999999874

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=2.4e-49  Score=337.58  Aligned_cols=246  Identities=26%  Similarity=0.411  Sum_probs=217.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHHcCCeEEEEEecCCCHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------------QKNVDKAVEKLKALGIEVIGIICHVSNEQ   74 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (255)
                      |.++++|++|||||++|||++++++|+++|++|++++|+            .+.+++..+++...+.++.++.+|++|++
T Consensus        41 m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~  120 (317)
T 3oec_A           41 MNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLA  120 (317)
T ss_dssp             -CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHH
T ss_pred             hhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHH
Confidence            457899999999999999999999999999999999886            66777888888888889999999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCcc
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGY  151 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~  151 (255)
                      +++++++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++++++|+|++   .++||++||..+.
T Consensus       121 ~v~~~~~~~~~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~  199 (317)
T 3oec_A          121 SLQAVVDEALAEFGHIDILVSNVGISN-QGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGL  199 (317)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGS
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhc
Confidence            999999999999999999999999875 678899999999999999999999999999999842   4789999999999


Q ss_pred             CCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----------CCH-HHHHH--hhccCCC
Q 025259          152 QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----------GND-AVRKA--LEGKTLL  216 (255)
Q Consensus       152 ~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----------~~~-~~~~~--~~~~~~~  216 (255)
                      .+.++...|++||+|+++|+++++.|+++ ||+||+|+||+++|++.....           ... ...+.  .....| 
T Consensus       200 ~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-  278 (317)
T 3oec_A          200 RGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP-  278 (317)
T ss_dssp             SCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSSS-
T ss_pred             CCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccCC-
Confidence            99999999999999999999999999998 999999999999999864210           111 11111  122334 


Q ss_pred             CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++.+|+|||++++||+++.+.++||++|.+|||.+.|
T Consensus       279 ~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            67889999999999999999999999999999999875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=4.9e-49  Score=327.17  Aligned_cols=248  Identities=28%  Similarity=0.485  Sum_probs=222.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++... +.++.++.+|++|+++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (263)
T 3ai3_A            2 DMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRS   81 (263)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999888888888765 67899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  ..++||++||..+..+.++...|++|
T Consensus        82 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (263)
T 3ai3_A           82 SFGGADILVNNAGTGS-NETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVT  160 (263)
T ss_dssp             HHSSCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHH
Confidence            9999999999999875 67788999999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhcc-CCCCCCCChHHHHHHHHHh
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEGK-TLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~-~~~~~~~~~~~va~~~~~l  232 (255)
                      |++++.|+++++.|+++ +|+||+|+||+++|++......         .++........ .|.+++.+|+|+|++++||
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l  240 (263)
T 3ai3_A          161 KAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFASPEELANFFVFL  240 (263)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999998 9999999999999998654321         12222333344 6888999999999999999


Q ss_pred             cCCCCCCccccEEeeCCCccCCC
Q 025259          233 ASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +++...+++|++|.+|||.+..|
T Consensus       241 ~s~~~~~~~G~~~~vdgG~~~s~  263 (263)
T 3ai3_A          241 CSERATYSVGSAYFVDGGMLKTL  263 (263)
T ss_dssp             TSTTCTTCCSCEEEESTTCCCCC
T ss_pred             cCccccCCCCcEEEECCCccccC
Confidence            99988999999999999988764

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=5.6e-50  Score=331.85  Aligned_cols=241  Identities=23%  Similarity=0.338  Sum_probs=197.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+
T Consensus         1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (257)
T 3tpc_A            1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL---GAAVRFRNADVTNEADATAALAFAKQ   77 (257)
T ss_dssp             ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEccCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999998887776665   45788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCc----CCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEEcCcCccCC
Q 025259           86 KYGRIDVFVLNAAVNPYAADL----LKTKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFISSIAGYQP  153 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~vss~~~~~~  153 (255)
                      ++|++|+||||||... ..++    .+.+.++|++.+++|+.+++.+++++.|+|++        .++||++||..+..+
T Consensus        78 ~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~  156 (257)
T 3tpc_A           78 EFGHVHGLVNCAGTAP-GEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDG  156 (257)
T ss_dssp             HHSCCCEEEECCCCCC-CCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             HcCCCCEEEECCCCCC-CCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccC
Confidence            9999999999999865 3332    36789999999999999999999999999864        468999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHHH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAF  231 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~  231 (255)
                      .++...|++||+++++|+++++.|+++ |||||+|+||+++|++.....  ++..+......|. +++.+|+|+|+++.|
T Consensus       157 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~~r~~~~~dva~~v~~  234 (257)
T 3tpc_A          157 QIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP--QDVQDALAASVPFPPRLGRAEEYAALVKH  234 (257)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC----------------CCSSSSCSCBCHHHHHHHHHH
T ss_pred             CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC--HHHHHHHHhcCCCCCCCCCHHHHHHHHHH
Confidence            999999999999999999999999998 999999999999999976542  3344555667777 899999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccCC
Q 025259          232 LASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+++  .++||++|.+|||+++.
T Consensus       235 l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          235 ICEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHHC--TTCCSCEEEESTTCCC-
T ss_pred             Hccc--CCcCCcEEEECCCccCC
Confidence            9975  78999999999998763

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=3.2e-50  Score=338.13  Aligned_cols=246  Identities=24%  Similarity=0.340  Sum_probs=215.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------------QKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      .|.++++|++|||||++|||++++++|+++|++|++++|+            .+.+++...+++..+.++.++.||++++
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            4568999999999999999999999999999999999998            6777888888888888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP  153 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~  153 (255)
                      ++++++++++.+++|++|+||||||... ..  .+.+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~-~~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~  160 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICP-LG--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIA  160 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-CC--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCc-cc--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhccc
Confidence            9999999999999999999999999865 32  34788999999999999999999999999988899999999988765


Q ss_pred             C-----------CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc------C---CHHH---HHH
Q 025259          154 P-----------SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL------G---NDAV---RKA  209 (255)
Q Consensus       154 ~-----------~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~------~---~~~~---~~~  209 (255)
                      .           ++...|++||+++++|+++++.|+++ |||||+|+||+++|++.....      +   .+..   ...
T Consensus       161 ~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (287)
T 3pxx_A          161 AAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADALLA  240 (287)
T ss_dssp             HHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHH
T ss_pred             ccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHHHHhh
Confidence            4           56788999999999999999999998 999999999999999875321      0   0111   111


Q ss_pred             --hhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          210 --LEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       210 --~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                        .....| +++.+|+|||++++||+++.+.++||++|.+|||.++++
T Consensus       241 ~~~~~~~~-~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~~  287 (287)
T 3pxx_A          241 FPAMQAMP-TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLKF  287 (287)
T ss_dssp             GGGGCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGGC
T ss_pred             hhhhcccC-CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhcC
Confidence              223344 789999999999999999999999999999999999875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=3e-49  Score=327.93  Aligned_cols=248  Identities=47%  Similarity=0.786  Sum_probs=224.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...+.++.++.||++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (260)
T 2zat_A           10 KPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH   89 (260)
T ss_dssp             CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999998888888888777889999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||......++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..++.+.++...|++||+
T Consensus        90 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  169 (260)
T 2zat_A           90 GGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKT  169 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHH
Confidence            99999999999864356788899999999999999999999999999985  3479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+++ +||||+|.||+++|++.......+..........|.+++.+|+|+|+++.||+++...+++|++
T Consensus       170 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~v~~l~s~~~~~~tG~~  249 (260)
T 2zat_A          170 ALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAGIVSFLCSEDASYITGET  249 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHHHHHHHTSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHcCcccCCccCCE
Confidence            999999999999998 9999999999999998764333333333444556788999999999999999999889999999


Q ss_pred             EeeCCCccCCC
Q 025259          245 LVVAGGMASRL  255 (255)
Q Consensus       245 i~~dgG~~~~~  255 (255)
                      |.+|||...+|
T Consensus       250 ~~vdgG~~~s~  260 (260)
T 2zat_A          250 VVVGGGTASRL  260 (260)
T ss_dssp             EEESTTCCCCC
T ss_pred             EEECCCccccC
Confidence            99999998875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=4.6e-49  Score=328.08  Aligned_cols=248  Identities=26%  Similarity=0.399  Sum_probs=220.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.  +.++.++.||++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888888765  6789999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +.+|++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus        88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  167 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAA  167 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             HHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHH
Confidence            99999999999999865226788899999999999999999999999999985  4589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh--c-CC---HHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL--L-GN---DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~--~-~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ||+++++|+++++.|+++ |||||+|+||+++|++....  . ..   ....+......|.+++.+|+|+|+.++||+++
T Consensus       168 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~s~  247 (267)
T 1iy8_A          168 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSD  247 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcCHHHHHHHHHHHcCc
Confidence            999999999999999998 99999999999999987542  1 11   11112455567889999999999999999999


Q ss_pred             CCCCccccEEeeCCCccCC
Q 025259          236 DASYITGETLVVAGGMASR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      ...+++|++|.+|||.+..
T Consensus       248 ~~~~~tG~~i~vdGG~~~~  266 (267)
T 1iy8_A          248 DASYVNATVVPIDGGQSAA  266 (267)
T ss_dssp             GGTTCCSCEEEESTTTTTB
T ss_pred             cccCCCCCEEEECCCcccC
Confidence            8899999999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=8.1e-49  Score=326.66  Aligned_cols=247  Identities=29%  Similarity=0.493  Sum_probs=222.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-HHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +..+.++.++.||++++++++++++++.+
T Consensus        16 ~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (267)
T 1vl8_A           16 VFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE   95 (267)
T ss_dssp             -CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            34688999999999999999999999999999999999999888888877 45577899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcC-ccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIA-GYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~-~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||.. +..+.++...|++
T Consensus        96 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  174 (267)
T 1vl8_A           96 KFGKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAA  174 (267)
T ss_dssp             HHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHH
T ss_pred             HcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHH
Confidence            9999999999999875 667889999999999999999999999999999864  47999999998 8888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +|+||+|+||+++|++.......++.........|.+++.+|+|+|+.++||+++...+++
T Consensus       175 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~it  254 (267)
T 1vl8_A          175 SKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVT  254 (267)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCc
Confidence            999999999999999998 9999999999999998765433344444455567888999999999999999999889999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||++.+
T Consensus       255 G~~i~vdGG~~~~  267 (267)
T 1vl8_A          255 GQIIFVDGGWTAN  267 (267)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CCeEEECCCCCCC
Confidence            9999999998753

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=6.7e-49  Score=325.89  Aligned_cols=245  Identities=28%  Similarity=0.475  Sum_probs=206.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.++
T Consensus         4 ~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            4 SMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHh
Confidence            35788999999999999999999999999999999999999888877655   567899999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC------CCeEEEEcCcCccCCCCCChhh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK------GSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~------~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      ++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++      .++||++||..+..+.++...|
T Consensus        81 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  160 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWY  160 (261)
T ss_dssp             HSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHH
T ss_pred             cCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHH
Confidence            9999999999998754667888899999999999999999999999999853      4579999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      ++||+++++|+++++.|+++ +|+||+|+||+++|++......  .++..+......|.+++.+|+|+|++++||+++..
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~  240 (261)
T 3n74_A          161 NATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLLKPDDLAEAAAFLCSPQA  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCCCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCcCHHHHHHHHHHHcCCcc
Confidence            99999999999999999998 9999999999999998765532  23445566677889999999999999999999999


Q ss_pred             CCccccEEeeCCCccCC
Q 025259          238 SYITGETLVVAGGMASR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      .++||++|.+|||.++.
T Consensus       241 ~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          241 SMITGVALDVDGGRSIG  257 (261)
T ss_dssp             TTCCSCEEEESTTTTC-
T ss_pred             cCcCCcEEEecCCcccC
Confidence            99999999999998753

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=3.9e-49  Score=330.93  Aligned_cols=243  Identities=28%  Similarity=0.460  Sum_probs=212.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++   .+.++.++.+|++++++++++++++.+.+|
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVA---HGGNAVGVVGDVRSLQDQKRAAERCLAAFG   78 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TBTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHH---cCCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999887776554   366899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCc----CCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           89 RIDVFVLNAAVNPYAADL----LKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|+||||||+.....++    .+.+.++|++++++|+.+++.++++++|+|+ ++++||++||..+..+.++...|++|
T Consensus        79 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (281)
T 3zv4_A           79 KIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTAT  158 (281)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHH
T ss_pred             CCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHH
Confidence            999999999986433333    3555678999999999999999999999985 46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcC-
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS-  234 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-  234 (255)
                      |+++++|+++++.|++++||||+|+||+++|+|......        ..+..+......|.+++.+|+|+|+.++||++ 
T Consensus       159 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~s~  238 (281)
T 3zv4_A          159 KHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIGRMPALEEYTGAYVFFATR  238 (281)
T ss_dssp             HHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTSSCCCGGGGSHHHHHHHST
T ss_pred             HHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCCCCCCHHHHHHHHHHhhcc
Confidence            999999999999999888999999999999998643211        11244566677899999999999999999999 


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +.+.++||++|.+|||++.+
T Consensus       239 ~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          239 GDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             TTSTTCSSCEEEESSSGGGC
T ss_pred             cccccccCcEEEECCCCccc
Confidence            78899999999999999754

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=1.1e-48  Score=329.63  Aligned_cols=242  Identities=28%  Similarity=0.365  Sum_probs=216.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHH-HcCCeEEEEEecCCCHH----------
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLK-ALGIEVIGIICHVSNEQ----------   74 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~----------   74 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++++|+++++          
T Consensus         4 m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (291)
T 1e7w_A            4 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGS   83 (291)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----C
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccc
Confidence            4678999999999999999999999999999999999 99999988888887 55778999999999999          


Q ss_pred             -------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCC--------------HHHHHHHHHHHhHHHHHHHHHHH
Q 025259           75 -------HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK--------------ESVLDKLWEINVKSSILLMQDAA  133 (255)
Q Consensus        75 -------~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~  133 (255)
                             +++++++++.+.+|++|+||||||... ..++.+.+              .++|++++++|+.+++.+++++.
T Consensus        84 ~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~  162 (291)
T 1e7w_A           84 APVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFA  162 (291)
T ss_dssp             CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHH
Confidence                   999999999999999999999999875 56778888              99999999999999999999999


Q ss_pred             hcccC--------CCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH
Q 025259          134 PHMQK--------GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND  204 (255)
Q Consensus       134 ~~l~~--------~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~  204 (255)
                      |+|++        .++||++||..+..+.++...|++||+++++|+++++.|+++ +||||+|+||+++|++ .  .. +
T Consensus       163 ~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~--~~-~  238 (291)
T 1e7w_A          163 HRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D--MP-P  238 (291)
T ss_dssp             HHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G--SC-H
T ss_pred             HHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c--CC-H
Confidence            99853        478999999999999999999999999999999999999998 9999999999999999 4  22 4


Q ss_pred             HHHHHhhccCCCC-CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          205 AVRKALEGKTLLN-RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       205 ~~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +..+......|.+ ++.+|+|+|+.++||+++...++||++|.+|||..+
T Consensus       239 ~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  288 (291)
T 1e7w_A          239 AVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  288 (291)
T ss_dssp             HHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence            4445555667888 899999999999999999999999999999999874

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=1.9e-48  Score=322.88  Aligned_cols=241  Identities=31%  Similarity=0.464  Sum_probs=218.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH--HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN--VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.  +++..++++..+.++.++.+|++++++++++++++.+.+|+
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            7899999999999999999999999999999999887  88888888777778999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CC-CeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KG-SSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~-~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +. ++||++||..+..+.++...|++||++
T Consensus        82 iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  160 (258)
T 3a28_C           82 FDVLVNNAGIAQ-IKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFA  160 (258)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHH
Confidence            999999999875 66788999999999999999999999999999985  34 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-------CC--HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-------GN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++|+++++.|+++ +||||+|+||+++|++.....       ..  ++..+......|.+++.+|+|+|+++.||+++.
T Consensus       161 ~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  240 (258)
T 3a28_C          161 VRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGRPSVPEDVAGLVSFLASEN  240 (258)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCcc
Confidence            99999999999998 999999999999999876522       11  333444556678889999999999999999999


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|++|.+|||...
T Consensus       241 ~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          241 SNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             GTTCCSCEEEESSSSCC
T ss_pred             cCCCCCCEEEECCCEec
Confidence            99999999999999865

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=3.4e-49  Score=330.66  Aligned_cols=242  Identities=26%  Similarity=0.398  Sum_probs=211.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------------hhHHHHHHHHHHHcCCeEEEEEecCCCHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------------QKNVDKAVEKLKALGIEVIGIICHVSNEQ   74 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+            .+.+++..++++..+.++.++.||++|++
T Consensus         8 ~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   87 (278)
T 3sx2_A            8 EGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRE   87 (278)
T ss_dssp             -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHH
Confidence            357899999999999999999999999999999999987            67778888888888889999999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCcc
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGY  151 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~  151 (255)
                      +++++++++.+++|++|+||||||+.. ...    +.++|++++++|+.+++.++++++|+|++   .++||++||..+.
T Consensus        88 ~v~~~~~~~~~~~g~id~lv~nAg~~~-~~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~  162 (278)
T 3sx2_A           88 SLSAALQAGLDELGRLDIVVANAGIAP-MSA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL  162 (278)
T ss_dssp             HHHHHHHHHHHHHCCCCEEEECCCCCC-CSS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT
T ss_pred             HHHHHHHHHHHHcCCCCEEEECCCCCC-CCC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc
Confidence            999999999999999999999999864 222    58999999999999999999999999853   5799999999998


Q ss_pred             CCC----CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHH---------HhhccCCCC
Q 025259          152 QPP----SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRK---------ALEGKTLLN  217 (255)
Q Consensus       152 ~~~----~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~---------~~~~~~~~~  217 (255)
                      .+.    ++...|++||+++++|+++++.|+++ +||||+|+||+++|++............         ......| +
T Consensus       163 ~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~  241 (278)
T 3sx2_A          163 AGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V  241 (278)
T ss_dssp             SCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred             CCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence            876    67788999999999999999999998 9999999999999998754322111111         1222344 6


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++.+|+|||+.++||+++.+.++||++|.+|||++.|
T Consensus       242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             CcCCHHHHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence            8889999999999999999999999999999999875

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.2e-48  Score=325.24  Aligned_cols=246  Identities=30%  Similarity=0.460  Sum_probs=214.7

Q ss_pred             cccccCCCCEEEEeCCC-CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTAST-QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~-~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.+.++++|++|||||+ +|||++++++|+++|++|++++|+.+.+++..+++++.+ .++.++.||+++++++++++++
T Consensus        15 ~~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (266)
T 3o38_A           15 DGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQ   94 (266)
T ss_dssp             CCCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHH
Confidence            34557899999999997 599999999999999999999999999999999987664 6899999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+   +.++||++||..+..+.++...
T Consensus        95 ~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  173 (266)
T 3o38_A           95 TVEKAGRLDVLVNNAGLGG-QTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH  173 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHHhCCCcEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCch
Confidence            9999999999999999875 67888999999999999999999999999999986   3468999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++||+++++|+++++.|+++ +|+||+|+||+++|++...... ++..+......+.+++.+|+|+|+.++||+++.+.
T Consensus       174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~r~~~~~dva~~i~~l~s~~~~  252 (266)
T 3o38_A          174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLDRLASDEAFGRAAEPWEVAATIAFLASDYSS  252 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------------------CCTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCcccc
Confidence            999999999999999999998 9999999999999999765533 34455666778889999999999999999999999


Q ss_pred             CccccEEeeCCCcc
Q 025259          239 YITGETLVVAGGMA  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      ++||++|.+|||++
T Consensus       253 ~~tG~~i~vdgG~~  266 (266)
T 3o38_A          253 YMTGEVVSVSSQRA  266 (266)
T ss_dssp             TCCSCEEEESSCCC
T ss_pred             CccCCEEEEcCCcC
Confidence            99999999999974

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.8e-48  Score=322.53  Aligned_cols=241  Identities=30%  Similarity=0.448  Sum_probs=218.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+.+|++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999999999999998888888887777899999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      +||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++   .++||++||..+..+.++...|++||++++
T Consensus        82 ~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  160 (256)
T 1geg_A           82 VIVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVR  160 (256)
T ss_dssp             EEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHH
Confidence            9999999865 667888999999999999999999999999999853   579999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +|+++++.|+++ +|+||+|+||+++|++.....         ...+..+......|.+++.+|+|+|+.+.||+++...
T Consensus       161 ~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  240 (256)
T 1geg_A          161 GLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSD  240 (256)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence            999999999998 999999999999999865431         1223334455567888999999999999999999889


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      +++|++|.+|||.+.
T Consensus       241 ~~tG~~i~vdGG~~~  255 (256)
T 1geg_A          241 YMTGQSLLIDGGMVF  255 (256)
T ss_dssp             TCCSCEEEESSSSSC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999864

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=8.2e-49  Score=324.11  Aligned_cols=243  Identities=28%  Similarity=0.467  Sum_probs=226.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++++.+.++.++.+|+++.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999998874 7788888899999988888999999999999999999999988764


Q ss_pred             ------CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           89 ------RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        89 ------~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                            ++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++.++||++||..+..+.++...|++
T Consensus        85 ~~~~~~~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~a  163 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGP-GAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSM  163 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             ccccCCcccEEEECCCCCC-CCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHH
Confidence                  4999999999865 677889999999999999999999999999999987889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +|+||+|+||+++|++.......+..........+.+++.+|+|+|+++.||+++.+.++|
T Consensus       164 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  243 (255)
T 3icc_A          164 TKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEVEDIADTAAFLASPDSRWVT  243 (255)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCHHHHHHHHHHHhCcccCCcc
Confidence            999999999999999998 9999999999999999888777776677777888899999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||.++
T Consensus       244 G~~i~vdgG~~l  255 (255)
T 3icc_A          244 GQLIDVSGGSCL  255 (255)
T ss_dssp             SCEEEESSSTTC
T ss_pred             CCEEEecCCeeC
Confidence            999999999864

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=1.5e-48  Score=321.91  Aligned_cols=242  Identities=32%  Similarity=0.493  Sum_probs=205.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|++ +.+++   ++++.+.++.++.+|++|+++++++++++.
T Consensus         1 M~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   77 (249)
T 2ew8_A            1 MTQRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNLGRRVLTVKCDVSQPGDVEAFGKQVI   77 (249)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence            34568899999999999999999999999999999999998 66654   445556789999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus        78 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  156 (249)
T 2ew8_A           78 STFGRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYIS  156 (249)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHH
Confidence            99999999999999875 66788899999999999999999999999999985  3579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhh-hhcCC-HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQ-ALLGN-DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ||++++.|+++++.|+++ +||||+|+||+++|++.. ..... ++..+...  .|.+++.+|+|+|+.++||+++...+
T Consensus       157 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~p~dva~~~~~l~s~~~~~  234 (249)
T 2ew8_A          157 TKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNML--QAIPRLQVPLDLTGAAAFLASDDASF  234 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTT--SSSCSCCCTHHHHHHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhh--CccCCCCCHHHHHHHHHHHcCcccCC
Confidence            999999999999999998 999999999999999865 32111 11112111  57788999999999999999998899


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|++|.+|||.+.
T Consensus       235 ~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          235 ITGQTLAVDGGMVR  248 (249)
T ss_dssp             CCSCEEEESSSCCC
T ss_pred             CCCcEEEECCCccC
Confidence            99999999999864

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=1.2e-48  Score=324.39  Aligned_cols=244  Identities=31%  Similarity=0.451  Sum_probs=212.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+++. +++..+++.+. +.++.++.+|++|+++++++++++.+.+
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            578999999999999999999999999999999999887 88888887665 6788999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++||+
T Consensus        82 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  160 (260)
T 1x1t_A           82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHH
Confidence            99999999999865 66788899999999999999999999999999985  4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------HHHHHHh-hccCCCCCCCChHHHHHHHHHhcC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------DAVRKAL-EGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~-~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      +++.|+++++.|+++ +||||+|+||+++|++.......         ++..... ....|.+++.+|+|+|+.++||++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s  240 (260)
T 1x1t_A          161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999998 99999999999999986543211         1222222 344678899999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +...+++|++|.+|||.+.|
T Consensus       241 ~~~~~~tG~~~~vdgG~~~~  260 (260)
T 1x1t_A          241 DAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhcCCCCCEEEECCCccCC
Confidence            98899999999999998764

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=8.7e-49  Score=327.13  Aligned_cols=244  Identities=31%  Similarity=0.424  Sum_probs=216.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+ .+..+...+++++.+.++.++.+|++++++++++++++.+
T Consensus        24 ~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~  103 (271)
T 4iin_A           24 AMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQ  103 (271)
T ss_dssp             CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             hcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999994 5566777788888888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus       104 ~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  182 (271)
T 4iin_A          104 SDGGLSYLVNNAGVVR-DKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSAS  182 (271)
T ss_dssp             HHSSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCcCC-CcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHH
Confidence            9999999999999876 67788999999999999999999999999999985  45899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.|+++++.|+++ +|+|++|+||+++|++.....  ++.........|.+++.+|+|+|+++.||+++...++||
T Consensus       183 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~~~~p~dvA~~i~~l~s~~~~~itG  260 (271)
T 4iin_A          183 KGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK--DELKADYVKNIPLNRLGSAKEVAEAVAFLLSDHSSYITG  260 (271)
T ss_dssp             HHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC--------------CGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc--HHHHHHHHhcCCcCCCcCHHHHHHHHHHHhCCCcCCCcC
Confidence            99999999999999987 999999999999999876642  334455667778899999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||+++
T Consensus       261 ~~i~vdGG~~~  271 (271)
T 4iin_A          261 ETLKVNGGLYM  271 (271)
T ss_dssp             CEEEESTTSCC
T ss_pred             CEEEeCCCeeC
Confidence            99999999864

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-48  Score=321.48  Aligned_cols=240  Identities=33%  Similarity=0.554  Sum_probs=218.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++++| +++.+++..++++..+.++.++.+|++|+++++++++++.+.+|
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            57999999999999999999999999999999999 88888888888887777899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++||++
T Consensus        82 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  160 (246)
T 2uvd_A           82 QVDILVNNAGVTK-DNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAG  160 (246)
T ss_dssp             CCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHH
Confidence            9999999999875 66788899999999999999999999999999985  45799999999998888999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ +|+||+|+||+++|++.....  +..........|.+++.+|+|+|+.+.||+++...+++|++|
T Consensus       161 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~  238 (246)
T 2uvd_A          161 VIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD--ENIKAEMLKLIPAAQFGEAQDIANAVTFFASDQSKYITGQTL  238 (246)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC--TTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEE
Confidence            99999999999998 999999999999999865432  223334445568889999999999999999998899999999


Q ss_pred             eeCCCcc
Q 025259          246 VVAGGMA  252 (255)
Q Consensus       246 ~~dgG~~  252 (255)
                      .+|||.+
T Consensus       239 ~vdgG~~  245 (246)
T 2uvd_A          239 NVDGGMV  245 (246)
T ss_dssp             EESTTSC
T ss_pred             EECcCcc
Confidence            9999975

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=7.4e-49  Score=327.05  Aligned_cols=250  Identities=22%  Similarity=0.266  Sum_probs=216.5

Q ss_pred             cccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ....++++|++|||||+  +|||++++++|+++|++|++++|+....+. .+++.+...++.++.||+++++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDR-ITEFAAEFGSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHH-HHHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence            34567899999999999  999999999999999999999999654444 344444344688999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCC---CCcCC-CCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCCh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYA---ADLLK-TKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~---~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +.+++|++|+||||||.....   .++.+ .+.++|++.+++|+.+++.++++++|+|++.++||++||..+..+.++..
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  165 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYN  165 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCcc
Confidence            999999999999999986521   45555 89999999999999999999999999998788999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|++||+|+++|+++++.|+++ ||+||+|+||+++|++.......++..+......|.+++.+|+|+|+.++||+++.+
T Consensus       166 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pedva~~i~~l~s~~~  245 (271)
T 3ek2_A          166 TMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTIEQVGNAGAFLLSDLA  245 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGG
T ss_pred             chhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCHHHHHHHHHHHcCccc
Confidence            9999999999999999999988 999999999999999876654445566777778899999999999999999999999


Q ss_pred             CCccccEEeeCCCccCCC
Q 025259          238 SYITGETLVVAGGMASRL  255 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~~  255 (255)
                      .++||++|.+|||.+..+
T Consensus       246 ~~~tG~~i~vdgG~~~~~  263 (271)
T 3ek2_A          246 SGVTAEVMHVDSGFNAVV  263 (271)
T ss_dssp             TTCCSEEEEESTTGGGBC
T ss_pred             CCeeeeEEEECCCeeeeh
Confidence            999999999999998653

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-48  Score=322.69  Aligned_cols=244  Identities=26%  Similarity=0.383  Sum_probs=222.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ...+++|++|||||++|||++++++|+++|++|++++ |+.+..++..++++..+.++.++.+|++|+++++++++++.+
T Consensus         8 ~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   87 (256)
T 3ezl_A            8 HMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKA   87 (256)
T ss_dssp             -----CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999887 777778888888888888899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        88 ~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  166 (256)
T 3ezl_A           88 EVGEIDVLVNNAGITR-DVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTA  166 (256)
T ss_dssp             HTCCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHH
T ss_pred             hcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHH
Confidence            9999999999999875 67888999999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+++++|+++++.|+++ +|+|++|+||+++|++....  .++..+......|.+++.+|+|+|++++||++++..+++|
T Consensus       167 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG  244 (256)
T 3ezl_A          167 KAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAI--RPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTG  244 (256)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEEEEEECcccCcccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCcccCCcC
Confidence            99999999999999998 99999999999999998765  4556667777789999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||+++
T Consensus       245 ~~i~vdgG~~~  255 (256)
T 3ezl_A          245 ADFSLNGGLHM  255 (256)
T ss_dssp             CEEEESTTSCC
T ss_pred             cEEEECCCEeC
Confidence            99999999875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=2.9e-48  Score=323.05  Aligned_cols=245  Identities=24%  Similarity=0.448  Sum_probs=222.2

Q ss_pred             cccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHH-HHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNV-DKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.++++|++|||||+  +|||++++++|+++|++|++++|+.+.. ++..+++.+ .+.++.+++||+++++++++++++
T Consensus        15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   94 (267)
T 3gdg_A           15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD   94 (267)
T ss_dssp             HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred             ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence            457899999999999  9999999999999999999999887655 666666654 377899999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCC--CCCh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPP--SAMA  158 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~--~~~~  158 (255)
                      +.+.++++|+||||||+.. ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.  ++..
T Consensus        95 ~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~  173 (267)
T 3gdg_A           95 VVADFGQIDAFIANAGATA-DSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQT  173 (267)
T ss_dssp             HHHHTSCCSEEEECCCCCC-CSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCH
T ss_pred             HHHHcCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCC
Confidence            9999999999999999875 66788999999999999999999999999999985  46899999999988765  5788


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      .|++||+++++|+++++.|+++.|+||+|+||+++|++....  .++..+......|.+++.+|+|+|+.++||+++.+.
T Consensus       174 ~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~r~~~~~dva~~~~~l~s~~~~  251 (267)
T 3gdg_A          174 SYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFV--PKETQQLWHSMIPMGRDGLAKELKGAYVYFASDAST  251 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGS--CHHHHHHHHTTSTTSSCEETHHHHHHHHHHHSTTCT
T ss_pred             cchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhC--CHHHHHHHHhcCCCCCCcCHHHHHhHhheeecCccc
Confidence            999999999999999999998889999999999999997654  455667777888999999999999999999999999


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      ++||++|.+|||+++|
T Consensus       252 ~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          252 YTTGADLLIDGGYTTR  267 (267)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCCEEEECCceecC
Confidence            9999999999999876

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=7.4e-48  Score=323.42  Aligned_cols=244  Identities=25%  Similarity=0.449  Sum_probs=218.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+. .++..+++.+.+.++.++.+|++++++++++++++.+.
T Consensus        25 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~  104 (283)
T 1g0o_A           25 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKI  104 (283)
T ss_dssp             GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999998754 56667777777888999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC-ChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~-~~~y~~sKa  165 (255)
                      ++++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.++||++||..+..+.++ ...|++||+
T Consensus       105 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~  183 (283)
T 1g0o_A          105 FGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKG  183 (283)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHH
Confidence            999999999999875 667888999999999999999999999999999977789999999999887664 899999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhc--cCCCCCCCChHHHHHHHHHhc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEG--KTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ++++|+++++.|+++ ||+||+|+||+++|++......         .++..+....  ..|.+++.+|+|+|+.++||+
T Consensus       184 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~  263 (283)
T 1g0o_A          184 AIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFLA  263 (283)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999998 9999999999999998764311         2333344444  678899999999999999999


Q ss_pred             CCCCCCccccEEeeCCCcc
Q 025259          234 SDDASYITGETLVVAGGMA  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++...++||++|.+|||.+
T Consensus       264 s~~~~~itG~~i~vdgG~~  282 (283)
T 1g0o_A          264 SNDGGWVTGKVIGIDGGAC  282 (283)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CccccCcCCCEEEeCCCcc
Confidence            9989999999999999975

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.3e-48  Score=325.80  Aligned_cols=238  Identities=34%  Similarity=0.497  Sum_probs=212.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+..          ......+++|++|+++++++++++.+.
T Consensus         9 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----------~~~~~~~~~Dv~~~~~v~~~~~~~~~~   78 (269)
T 3vtz_A            9 MEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSD----------VNVSDHFKIDVTNEEEVKEAVEKTTKK   78 (269)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--C----------TTSSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhc----------cCceeEEEecCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999999987643          124567899999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..++.+.++...|++||
T Consensus        79 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (269)
T 3vtz_A           79 YGRIDILVNNAGIEQ-YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSK  157 (269)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHH
Confidence            999999999999875 67888999999999999999999999999999985  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC------C---HHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG------N---DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       165 aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +++++|+++++.|++++|+||+|+||+++|++......      .   ....+......|.+++.+|+|+|++++||+++
T Consensus       158 aa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~  237 (269)
T 3vtz_A          158 HALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRIGRPEEVAEVVAFLASD  237 (269)
T ss_dssp             HHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            99999999999999889999999999999998754321      1   33455566778999999999999999999999


Q ss_pred             CCCCccccEEeeCCCccCCC
Q 025259          236 DASYITGETLVVAGGMASRL  255 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~~  255 (255)
                      .+.++||++|.+|||.+.++
T Consensus       238 ~~~~itG~~i~vdGG~~~~~  257 (269)
T 3vtz_A          238 RSSFITGACLTVDGGLLSKL  257 (269)
T ss_dssp             GGTTCCSCEEEESTTGGGBC
T ss_pred             ccCCCcCcEEEECCCccccC
Confidence            99999999999999998653

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.1e-48  Score=324.57  Aligned_cols=243  Identities=28%  Similarity=0.405  Sum_probs=217.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+ ++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~  102 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL  102 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHh
Confidence            356899999999999999999999999999999999999998888888876655 7889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CC----CeEEEEcCcCccCCCCCCh-h
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KG----SSVVFISSIAGYQPPSAMA-M  159 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~----~~iv~vss~~~~~~~~~~~-~  159 (255)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  ..    ++||++||..+..+.++.. .
T Consensus       103 ~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~  181 (276)
T 2b4q_A          103 SARLDILVNNAGTSW-GAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYA  181 (276)
T ss_dssp             CSCCSEEEECCCCCC-CCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTT
T ss_pred             cCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccc
Confidence            999999999999875 56788899999999999999999999999999985  33    7999999999998888888 9


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhc--cCCCCCCCChHHHHHHHHHhcCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEG--KTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |++||++++.|+++++.|+++ +||||+|.||+++|++.......  .......  ..|.+++.+|+|+|+.++||+++.
T Consensus       182 Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~  259 (276)
T 2b4q_A          182 YGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND--PQALEADSASIPMGRWGRPEEMAALAISLAGTA  259 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC--HHHHHHHHHTSTTSSCCCHHHHHHHHHHHHSGG
T ss_pred             cHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh--HHHHHHhhcCCCCCCcCCHHHHHHHHHHHhCcc
Confidence            999999999999999999998 99999999999999987543221  2223333  568889999999999999999998


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|++|.+|||.++
T Consensus       260 ~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          260 GAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             GTTCCSCEEEESTTTTC
T ss_pred             ccCCCCCEEEeCCCccC
Confidence            89999999999999753

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.6e-48  Score=324.52  Aligned_cols=248  Identities=21%  Similarity=0.298  Sum_probs=214.8

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ||.++++|++|||||+  +|||++++++|+++|++|++++|+. ..++..+++.+......++++|++++++++++++++
T Consensus         3 mm~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   81 (265)
T 1qsg_A            3 HMGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAEL   81 (265)
T ss_dssp             --CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHH
Confidence            4456899999999999  9999999999999999999999987 444555555443233478899999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCcCC-CCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           84 VEKYGRIDVFVLNAAVNPY---AADLLK-TKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      .+++|++|+||||||....   ..++.+ .+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+.++...
T Consensus        82 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  161 (265)
T 1qsg_A           82 GKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNV  161 (265)
T ss_dssp             HTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTH
T ss_pred             HHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchH
Confidence            9999999999999997642   145667 899999999999999999999999999976789999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++||++++.|+++++.|+++ +|+||+|+||+++|++.......+...+......|.+++.+|+|+|+.++||+++...
T Consensus       162 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~  241 (265)
T 1qsg_A          162 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSA  241 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999998 9999999999999998765432234444455567888999999999999999999889


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      +++|++|.+|||.+.+
T Consensus       242 ~~tG~~~~vdgG~~~~  257 (265)
T 1qsg_A          242 GISGEVVHVDGGFSIA  257 (265)
T ss_dssp             TCCSCEEEESTTGGGB
T ss_pred             CccCCEEEECCCcCCC
Confidence            9999999999998754

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.5e-48  Score=322.70  Aligned_cols=248  Identities=24%  Similarity=0.303  Sum_probs=216.7

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +..++++|++|||||+  +|||++++++|+++|++|++++|+++ .++..+++.+....+.++.+|++++++++++++++
T Consensus         2 ~~~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (261)
T 2wyu_A            2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (261)
T ss_dssp             EEECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHH
Confidence            3346789999999999  99999999999999999999999875 44444555443234788999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .+.+|++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+.++...|
T Consensus        81 ~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  160 (261)
T 2wyu_A           81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVM  160 (261)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHH
T ss_pred             HHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHH
Confidence            9999999999999998642   2567889999999999999999999999999999766899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||++++.|+++++.|+++ +|+||+|+||+++|++.......+...+......|.+++.+|+|+|+.++||+++...+
T Consensus       161 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~v~~l~s~~~~~  240 (261)
T 2wyu_A          161 AIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG  240 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHHHHHHHHHHcChhhcC
Confidence            99999999999999999998 99999999999999987654332344455556678899999999999999999998899


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|++|.+|||.+.+
T Consensus       241 ~tG~~~~vdgG~~~~  255 (261)
T 2wyu_A          241 ITGEVVYVDAGYHIM  255 (261)
T ss_dssp             CCSCEEEESTTGGGB
T ss_pred             CCCCEEEECCCcccc
Confidence            999999999998754

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-48  Score=327.51  Aligned_cols=247  Identities=28%  Similarity=0.438  Sum_probs=219.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+.   ++.++.+|++++++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999999999999999988888877665   7999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCC--cCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCC-CCChh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPP-SAMAM  159 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~-~~~~~  159 (255)
                      .+++|++|+||||||... ..+  +.+.+.++|++++++|+.+++.+++++.|+|+ .+++||++||..+..+. ++...
T Consensus       101 ~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~  179 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANL-ADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPY  179 (297)
T ss_dssp             HHHHSCCCEEEECCCCCC-CCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHH
T ss_pred             HHhcCCCCEEEECCCcCc-CCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcch
Confidence            999999999999999864 455  78899999999999999999999999999985 34899999999998888 88999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-------HHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      |++||+++++|+++++.|+++ |||||+|.||+++|++.......       .+..+......|.+++.+|+|+|+.++|
T Consensus       180 Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~  259 (297)
T 1xhl_A          180 YACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVF  259 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999998 99999999999999987654211       1223334455688899999999999999


Q ss_pred             hcCCC-CCCccccEEeeCCCccCC
Q 025259          232 LASDD-ASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      |+++. ..+++|++|.+|||.+.+
T Consensus       260 l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          260 LADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhCCcccCCccCcEEEECCCcccc
Confidence            99987 889999999999998764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=2.4e-48  Score=324.08  Aligned_cols=245  Identities=21%  Similarity=0.278  Sum_probs=211.9

Q ss_pred             ccccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ||.++++|++|||||  ++|||++++++|+++|++|++++|+.+. +++..++   .+.++.++.+|+++++++++++++
T Consensus         1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~   77 (269)
T 2h7i_A            1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR---LPAKAPLLELDVQNEEHLASLAGR   77 (269)
T ss_dssp             -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT---SSSCCCEEECCTTCHHHHHHHHHH
T ss_pred             CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh---cCCCceEEEccCCCHHHHHHHHHH
Confidence            456789999999999  9999999999999999999999998765 3443332   245678899999999999999999


Q ss_pred             HHHHcC---CCcEEEECCCCCCC----CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC
Q 025259           83 TVEKYG---RIDVFVLNAAVNPY----AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS  155 (255)
Q Consensus        83 ~~~~~g---~~d~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~  155 (255)
                      +.+.+|   ++|+||||||....    ..++.+.+.++|++.+++|+.+++.+++++.|+|+++++||++||..+ .+.+
T Consensus        78 ~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           78 VTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCT
T ss_pred             HHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccC
Confidence            999999   99999999997641    357788999999999999999999999999999987789999999876 6778


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---CHH-------HHHHhhccCCCC-CCCChH
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---NDA-------VRKALEGKTLLN-RLGTTG  223 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---~~~-------~~~~~~~~~~~~-~~~~~~  223 (255)
                      ++..|++||+++++|+++++.|+++ |||||+|+||+++|++......   .+.       ..+......|.+ ++.+|+
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~rr~~~p~  236 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDAT  236 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCH
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcccCCCCHH
Confidence            8899999999999999999999988 9999999999999998765321   121       123344567888 699999


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      |+|+.+.||+++.+.++||++|.+|||++.+
T Consensus       237 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          237 PVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            9999999999999999999999999998764

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=6.5e-48  Score=322.85  Aligned_cols=244  Identities=29%  Similarity=0.447  Sum_probs=220.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.||++++++++++++++.+.+
T Consensus        18 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   97 (277)
T 2rhc_B           18 ATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY   97 (277)
T ss_dssp             CCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            36889999999999999999999999999999999999999888888888777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhc--cc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPH--MQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~--l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.  |+  +.++||++||..+..+.++...|++|
T Consensus        98 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  176 (277)
T 2rhc_B           98 GPVDVLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSAS  176 (277)
T ss_dssp             CSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHH
Confidence            99999999999865 667888999999999999999999999999998  75  34799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---C------HHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---N------DAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      |++++.|+++++.|+++ +|+||+|.||+++|++......   .      ++..+......|.+++.+|+|+|++++||+
T Consensus       177 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dvA~~v~~l~  256 (277)
T 2rhc_B          177 KHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLI  256 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence            99999999999999998 9999999999999998654311   0      222334445568889999999999999999


Q ss_pred             CCCCCCccccEEeeCCCcc
Q 025259          234 SDDASYITGETLVVAGGMA  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++...+++|++|.+|||..
T Consensus       257 s~~~~~~tG~~~~vdGG~~  275 (277)
T 2rhc_B          257 GPGAAAVTAQALNVCGGLG  275 (277)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CchhcCCCCcEEEECCCcc
Confidence            9988999999999999975

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-48  Score=325.17  Aligned_cols=246  Identities=27%  Similarity=0.429  Sum_probs=219.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.   ++.++.||++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888888877665   79999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCC-CCCh
Q 025259           85 EKYGRIDVFVLNAAVNPYAAD----LLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPP-SAMA  158 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~-~~~~  158 (255)
                      +++|++|+||||||... ..+    +.+.+.++|++.+++|+.+++.+++++.|+|+ .+++||++||..+..+. ++..
T Consensus        82 ~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  160 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFL  160 (280)
T ss_dssp             HHHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSH
T ss_pred             HhcCCCCEEEECCCCCC-CCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCccc
Confidence            99999999999999864 445    77889999999999999999999999999985 33899999999998887 8899


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-------HHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      .|++||+++++|+++++.|+++ |||||+|+||+++|++.......       .+.........|.+++.+|+|+|+.++
T Consensus       161 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~  240 (280)
T 1xkq_A          161 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIIL  240 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence            9999999999999999999988 99999999999999987654211       122334445568889999999999999


Q ss_pred             HhcCCC-CCCccccEEeeCCCccCC
Q 025259          231 FLASDD-ASYITGETLVVAGGMASR  254 (255)
Q Consensus       231 ~l~s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      ||+++. ..+++|++|.+|||.+.+
T Consensus       241 ~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          241 FLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhcCcccccCccCCeEEECCCcccc
Confidence            999987 889999999999998764

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3e-48  Score=322.41  Aligned_cols=249  Identities=29%  Similarity=0.425  Sum_probs=216.5

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |+.|..++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.   .++.++.+|++|++++++++
T Consensus         1 ~~~m~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~d~~~v~~~~   77 (263)
T 3ak4_A            1 GSHMAGIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLE---NGGFAVEVDVTKRASVDAAM   77 (263)
T ss_dssp             -----CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCT---TCCEEEECCTTCHHHHHHHH
T ss_pred             CCCcccCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh---cCCeEEEEeCCCHHHHHHHH
Confidence            666666778999999999999999999999999999999999999887776655443   25778999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--C-CCeEEEEcCcCccCCCCCC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--K-GSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~-~~~iv~vss~~~~~~~~~~  157 (255)
                      +++.+++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  . .++||++||..+..+.++.
T Consensus        78 ~~~~~~~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  156 (263)
T 3ak4_A           78 QKAIDALGGFDLLCANAGVST-MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLL  156 (263)
T ss_dssp             HHHHHHHTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTC
T ss_pred             HHHHHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCc
Confidence            999999999999999999875 66788899999999999999999999999999985  3 5899999999999998999


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----C-----HHHHHHhhccCCCCCCCChHHHHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----N-----DAVRKALEGKTLLNRLGTTGNMAA  227 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~-----~~~~~~~~~~~~~~~~~~~~~va~  227 (255)
                      ..|++||++++.|+++++.|+++ +||||+|.||+++|++......    .     ++.........|.+++.+|+|+|+
T Consensus       157 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~  236 (263)
T 3ak4_A          157 AHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGRIEEPEDVAD  236 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCSCBCHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCCCcCHHHHHH
Confidence            99999999999999999999998 9999999999999998654310    0     233344455678889999999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++||+++...+++|++|.+|||.+.
T Consensus       237 ~v~~l~s~~~~~~tG~~~~vdgG~~~  262 (263)
T 3ak4_A          237 VVVFLASDAARFMTGQGINVTGGVRM  262 (263)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred             HHHHHhCccccCCCCCEEEECcCEeC
Confidence            99999999889999999999999764

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=5e-48  Score=320.65  Aligned_cols=236  Identities=23%  Similarity=0.293  Sum_probs=196.9

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      -++++++|++|||||++|||++++++|+++|++|++++|+.+.+.+..   .+.+  +.++.+|++++++++++++++.+
T Consensus        21 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~---~~~~--~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           21 GHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTEL---RQAG--AVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             ------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHH---HHHT--CEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHH---HhcC--CeEEECCCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999999987654433   3333  67889999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..+ .+.++++|++++++|+.+++.++++++|+|++  .++||++||..+..+.++...|++|
T Consensus        96 ~~g~iD~lv~nAg~~~-~~~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  173 (260)
T 3gem_A           96 QTSSLRAVVHNASEWL-AET-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCAT  173 (260)
T ss_dssp             HCSCCSEEEECCCCCC-CCC-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHH
T ss_pred             hcCCCCEEEECCCccC-CCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHH
Confidence            9999999999999864 333 67788999999999999999999999999964  3799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      |+++++|+++++.|++++||||+|+||+++|++..    ............|.+++.+|+|+|++++||+  ++.++||+
T Consensus       174 Kaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~----~~~~~~~~~~~~p~~r~~~~edva~~v~~L~--~~~~itG~  247 (260)
T 3gem_A          174 KAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKD----DAAYRANALAKSALGIEPGAEVIYQSLRYLL--DSTYVTGT  247 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-------------------CCSCCCCCTHHHHHHHHHHH--HCSSCCSC
T ss_pred             HHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCC----CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHh--hCCCCCCC
Confidence            99999999999999988999999999999998754    2334455566778999999999999999999  46899999


Q ss_pred             EEeeCCCccCC
Q 025259          244 TLVVAGGMASR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      +|.+|||.+++
T Consensus       248 ~i~vdGG~~~~  258 (260)
T 3gem_A          248 TLTVNGGRHVK  258 (260)
T ss_dssp             EEEESTTTTTC
T ss_pred             EEEECCCcccC
Confidence            99999999864

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=4.7e-48  Score=322.36  Aligned_cols=243  Identities=27%  Similarity=0.423  Sum_probs=216.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++|++|||||++|||++++++|+++|++|++++ ++.+..++..+++...+.++.++.||++|+++++++++++.+.+|
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            6799999999999999999999999999999998 666667777777777778899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||+|
T Consensus       103 ~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  181 (269)
T 3gk3_A          103 KVDVLINNAGITR-DATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAG  181 (269)
T ss_dssp             CCSEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHH
Confidence            9999999999875 67888999999999999999999999999999884  56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ +|+||+|+||+++|++...... ...........|.+++.+|+|+|+.++||+++...++||++|
T Consensus       182 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i  260 (269)
T 3gk3_A          182 IHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ-DVLEAKILPQIPVGRLGRPDEVAALIAFLCSDDAGFVTGADL  260 (269)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC--------CCSGGGCTTSSCBCHHHHHHHHHHHTSTTCTTCCSCEE
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch-hHHHHHhhhcCCcCCccCHHHHHHHHHHHhCCCcCCeeCcEE
Confidence            99999999999998 9999999999999999765432 112224556678899999999999999999999999999999


Q ss_pred             eeCCCccCC
Q 025259          246 VVAGGMASR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      .+|||.+++
T Consensus       261 ~vdgG~~~s  269 (269)
T 3gk3_A          261 AINGGMHMS  269 (269)
T ss_dssp             EESTTSCCC
T ss_pred             EECCCEeCc
Confidence            999998764

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=5.7e-48  Score=323.66  Aligned_cols=247  Identities=22%  Similarity=0.254  Sum_probs=220.6

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      -|.++++|++|||||+  +|||++++++|+++|++|++++|+.  .++..+++.+...++.++.||++++++++++++++
T Consensus        20 ~M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   97 (280)
T 3nrc_A           20 HMGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVEL   97 (280)
T ss_dssp             --CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHH
Confidence            3467899999999988  7899999999999999999999988  34445556555556889999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCC---CCCcCC-CCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCCh
Q 025259           84 VEKYGRIDVFVLNAAVNPY---AADLLK-TKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~---~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~  158 (255)
                      .+.++++|+||||||....   ..++.+ .+.++|++.+++|+.+++.++++++|+|+ +.++||++||..+..+.++..
T Consensus        98 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~  177 (280)
T 3nrc_A           98 GKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYN  177 (280)
T ss_dssp             HHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTH
T ss_pred             HHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCch
Confidence            9999999999999998642   144455 89999999999999999999999999986 568999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|++||+|+++|+++++.|+++ +|+|++|+||+++|++.......++..+......|.+++.+|+|+|+.++||+++..
T Consensus       178 ~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~pedvA~~v~~l~s~~~  257 (280)
T 3nrc_A          178 TMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVDIMEVGNTVAFLCSDMA  257 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCCHHHHHHHHHHTTSGGG
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccc
Confidence            9999999999999999999998 999999999999999987766556677777788899999999999999999999999


Q ss_pred             CCccccEEeeCCCccCC
Q 025259          238 SYITGETLVVAGGMASR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      .++||++|.+|||.+..
T Consensus       258 ~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          258 TGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             CCcCCcEEEECCCcccc
Confidence            99999999999998753

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=4.6e-48  Score=320.84  Aligned_cols=243  Identities=26%  Similarity=0.428  Sum_probs=212.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++...  +.++.++.+|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999888888887654  34789999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+| +|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        83 ~~g-id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  160 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPR-PGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIM  160 (260)
T ss_dssp             TTC-CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             hcC-CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHH
Confidence            999 999999999865 66788999999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc--------CCHHH-HHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL--------GNDAV-RKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      |++++.++++++.|+++ +|+||+|+||+++|++.....        ..++. ........|.+++.+|+|+|+.++||+
T Consensus       161 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~l~  240 (260)
T 2z1n_A          161 RLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVGKPEELASVVAFLA  240 (260)
T ss_dssp             THHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            99999999999999998 999999999999999865210        01111 233445568889999999999999999


Q ss_pred             CCCCCCccccEEeeCCCcc
Q 025259          234 SDDASYITGETLVVAGGMA  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++...+++|++|.+|||.+
T Consensus       241 s~~~~~~tG~~i~vdGG~~  259 (260)
T 2z1n_A          241 SEKASFITGAVIPVDGGAH  259 (260)
T ss_dssp             SGGGTTCCSCEEEESTTTT
T ss_pred             CccccCCCCCEEEeCCCcc
Confidence            9988999999999999975

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.9e-48  Score=320.60  Aligned_cols=244  Identities=30%  Similarity=0.451  Sum_probs=183.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.||++|+++++++++++.+.
T Consensus         4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T 3qiv_A            4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE   83 (253)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            35788999999999999999999999999999999999999999999999888889999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCC--CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           87 YGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++++|+||||||...  ...++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..++   ++...|++
T Consensus        84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~a  160 (253)
T 3qiv_A           84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGL  160 (253)
T ss_dssp             HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------C
T ss_pred             cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHH
Confidence            999999999999842  245677899999999999999999999999999985  56799999999876   45677999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +|+|++|+||+++|++...... ++..+......|.+++.+|+|+|+.+.||+++...++|
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~t  239 (253)
T 3qiv_A          161 AKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVDDIVKGLPLSRMGTPDDLVGMCLFLLSDEASWIT  239 (253)
T ss_dssp             CHHHHHHHHHHHHHHTTTTTEEEEEEEC--------------------------------CCHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHHHHhccCCCCCCCCHHHHHHHHHHHcCccccCCC
Confidence            999999999999999998 9999999999999998765432 34455566677888999999999999999999999999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |++|.+|||...|
T Consensus       240 G~~~~vdgG~~~~  252 (253)
T 3qiv_A          240 GQIFNVDGGQIIR  252 (253)
T ss_dssp             SCEEEC-------
T ss_pred             CCEEEECCCeecC
Confidence            9999999998764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=1.4e-47  Score=317.29  Aligned_cols=240  Identities=32%  Similarity=0.491  Sum_probs=211.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+++. ++..+++.    + .++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~----~-~~~~~D~~~~~~~~~~~~~~~~~~   75 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIG----G-AFFQVDLEDERERVRFVEEAAYAL   75 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHT----C-EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhh----C-CEEEeeCCCHHHHHHHHHHHHHHc
Confidence            56789999999999999999999999999999999999877 66655553    4 778999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++  .++||++||..+..+.++...|++||+
T Consensus        76 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  154 (256)
T 2d1y_A           76 GRVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKG  154 (256)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHH
Confidence            99999999999875 667889999999999999999999999999999864  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh----cCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL----LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +++.|+++++.|+++ +||||+|.||+++|++....    ...++..+......|.+++.+|+|+|+.++||+++...++
T Consensus       155 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~~  234 (256)
T 2d1y_A          155 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFI  234 (256)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCC
Confidence            999999999999998 99999999999999987653    1112222334455678899999999999999999988899


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|++|.+|||.+.+
T Consensus       235 ~G~~~~v~gG~~~~  248 (256)
T 2d1y_A          235 TGAILPVDGGMTAS  248 (256)
T ss_dssp             CSCEEEESTTGGGB
T ss_pred             CCCEEEECCCcccc
Confidence            99999999998754

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=9.2e-48  Score=320.22  Aligned_cols=245  Identities=23%  Similarity=0.373  Sum_probs=219.1

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.++.++++|++|||||++|||++++++|+++|++|++ ..|+.+.+++..+++.+.+.++.++.+|++|++++++++++
T Consensus        18 ~~~~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~   97 (267)
T 4iiu_A           18 LYFQSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEH   97 (267)
T ss_dssp             -------CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             hhhccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence            45666789999999999999999999999999999865 56778888888899988888999999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +.++++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++++.|.   +.++||++||..+..+.++...
T Consensus        98 ~~~~~g~id~li~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  176 (267)
T 4iiu_A           98 EIAQHGAWYGVVSNAGIAR-DAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVN  176 (267)
T ss_dssp             HHHHHCCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHH
T ss_pred             HHHHhCCccEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCch
Confidence            9999999999999999875 67888999999999999999999999999988763   4579999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |++||+|+++|+++++.|+++ +|+|++|+||+++|++....   ++.........|.+++.+|+|+|+++.||+++...
T Consensus       177 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~p~~~~~~~edva~~~~~L~s~~~~  253 (267)
T 4iiu_A          177 YSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME---ESALKEAMSMIPMKRMGQAEEVAGLASYLMSDIAG  253 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC---HHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGT
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc---HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999998 99999999999999987543   44556666778999999999999999999999999


Q ss_pred             CccccEEeeCCCcc
Q 025259          239 YITGETLVVAGGMA  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      ++||++|.+|||+.
T Consensus       254 ~itG~~i~vdGG~~  267 (267)
T 4iiu_A          254 YVTRQVISINGGML  267 (267)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             CccCCEEEeCCCcC
Confidence            99999999999963

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.5e-48  Score=325.89  Aligned_cols=244  Identities=20%  Similarity=0.308  Sum_probs=217.7

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCC---eEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGA---SVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~---~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      ++.++++|++|||||++|||++++++|+++|+   +|++++|+.+.++++.+++...  +.++.++.||++|++++++++
T Consensus        27 ~~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~  106 (287)
T 3rku_A           27 AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFI  106 (287)
T ss_dssp             HHHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHH
T ss_pred             chhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHH
Confidence            45678999999999999999999999999998   8999999999999999988775  578999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +++.+++|++|+||||||......++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+..+.++..
T Consensus       107 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~  186 (287)
T 3rku_A          107 ENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGS  186 (287)
T ss_dssp             HTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCH
T ss_pred             HHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCc
Confidence            999999999999999999865466788999999999999999999999999999985  568999999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-HH-HHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-DA-VRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      .|++||+|+++|+++++.|+++ |||||+|+||+++|++....... .+ .........    ..+|+|||++++||+++
T Consensus       187 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~----p~~pedvA~~v~~l~s~  262 (287)
T 3rku_A          187 IYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTT----PLMADDVADLIVYATSR  262 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSC----CEEHHHHHHHHHHHHTS
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccC----CCCHHHHHHHHHHHhCC
Confidence            9999999999999999999998 99999999999999986543322 22 222232222    34899999999999999


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      ...+++|+++.+|||...
T Consensus       263 ~~~~i~g~~i~v~~g~~~  280 (287)
T 3rku_A          263 KQNTVIADTLIFPTNQAS  280 (287)
T ss_dssp             CTTEEEEEEEEEETTEEE
T ss_pred             CCCeEecceEEeeCCCCC
Confidence            999999999999999753

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=7.8e-48  Score=322.00  Aligned_cols=245  Identities=23%  Similarity=0.282  Sum_probs=216.2

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+...++.++.+|++++++++++++++.+
T Consensus         2 ~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   80 (275)
T 2pd4_A            2 GFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKK   80 (275)
T ss_dssp             CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999  99999999999999999999999986 4555555554333478899999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||....   ..++.+.+.++|++++++|+.+++.+++++.|+|++.++||++||..+..+.++...|++
T Consensus        81 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  160 (275)
T 2pd4_A           81 DLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGL  160 (275)
T ss_dssp             HTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHH
T ss_pred             HcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHH
Confidence            99999999999998642   257788999999999999999999999999999976789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ ||+||+|+||+++|++.......+..........|.+++.+|+|+|+.++||+++...+++
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dva~~~~~l~s~~~~~~t  240 (275)
T 2pd4_A          161 AKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVS  240 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCccccCCC
Confidence            999999999999999988 9999999999999998765433234445555567888999999999999999999889999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||...
T Consensus       241 G~~~~vdgg~~~  252 (275)
T 2pd4_A          241 GEVHFVDAGYHV  252 (275)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccc
Confidence            999999999764

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=8.2e-48  Score=318.34  Aligned_cols=239  Identities=27%  Similarity=0.303  Sum_probs=212.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|++|||||++|||++++++|+++|  +.|++++|+++.+++..+++   +.++.++.+|++|+++++++++++.+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKY---GDRFFYVVGDITEDSVLKQLVNAAVKGHGK   78 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHH---GGGEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHh---CCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            7999999999999999999999985  67999999998888777665   567999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      +|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+ .+++||++||..+..+.++...|++||++++
T Consensus        79 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~  158 (254)
T 3kzv_A           79 IDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALN  158 (254)
T ss_dssp             CCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHH
T ss_pred             ccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHH
Confidence            999999999865457889999999999999999999999999999985 3589999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC-CCCc
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD-ASYI  240 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~-~~~~  240 (255)
                      +|+++++.|+ ++||||+|+||+++|++......       .++..+......|.+++.+|+|+|+.++||+++. +.++
T Consensus       159 ~~~~~la~e~-~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dva~~v~~L~s~~~~~~i  237 (254)
T 3kzv_A          159 HFAMTLANEE-RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDSSVPATVYAKLALHGIPDGV  237 (254)
T ss_dssp             HHHHHHHHHC-TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----CHHHHHHHHHHHHHCCCGGG
T ss_pred             HHHHHHHhhc-cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCcccHHHHHHHHHhhcccCCC
Confidence            9999999998 78999999999999998765432       3455666677789999999999999999999998 5999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||+.|.+|||....
T Consensus       238 tG~~i~vdg~~~~~  251 (254)
T 3kzv_A          238 NGQYLSYNDPALAD  251 (254)
T ss_dssp             TTCEEETTCGGGGG
T ss_pred             CccEEEecCccccc
Confidence            99999999997643

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-48  Score=321.16  Aligned_cols=240  Identities=30%  Similarity=0.465  Sum_probs=212.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   ..++.++.+|++|+++++++++++.+.+
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL---EAEAIAVVADVSDPKAVEAVFAEALEEF   78 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC---CSSEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999998877665544   3578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++.++||++||..+. +.++...|++||+++
T Consensus        79 g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~  156 (263)
T 2a4k_A           79 GRLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGV  156 (263)
T ss_dssp             SCCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHH
T ss_pred             CCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHH
Confidence            99999999999875 6678899999999999999999999999999998446899999999998 777888999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++|+++++.|+++ ||+||+|+||+++|++....  .++..+......|.+++.+|+|+|+.++||+++...+++|+++.
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~  234 (263)
T 2a4k_A          157 VGLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALY  234 (263)
T ss_dssp             HHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCcCCEEE
Confidence            9999999999998 99999999999999987653  23444455566788899999999999999999989999999999


Q ss_pred             eCCCccCC
Q 025259          247 VAGGMASR  254 (255)
Q Consensus       247 ~dgG~~~~  254 (255)
                      +|||.+.+
T Consensus       235 vdgG~~~~  242 (263)
T 2a4k_A          235 VDGGRSIV  242 (263)
T ss_dssp             ESTTTTTC
T ss_pred             ECCCcccc
Confidence            99998653

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-47  Score=314.30  Aligned_cols=237  Identities=28%  Similarity=0.416  Sum_probs=212.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +  +.++.+|++|+++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~D~~~~~~~~~~~~~~~~~~g   76 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV---G--AHPVVMDVADPASVERGFAEALAHLG   76 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988777665443   3  67889999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++  .++||++||.. ..+.++...|++||++
T Consensus        77 ~id~lvn~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a  154 (245)
T 1uls_A           77 RLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAG  154 (245)
T ss_dssp             SCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHH
Confidence            9999999999875 667889999999999999999999999999999863  47999999998 8888889999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+++++.|+++ |||||+|+||+++|++....  .+...+......|.+++.+|+|+|+.++||+++...+++|+.+
T Consensus       155 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~  232 (245)
T 1uls_A          155 VVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVL  232 (245)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc--CHHHHHHHHhhCCCCCCcCHHHHHHHHHHHhCchhcCCcCCEE
Confidence            99999999999998 99999999999999987543  2333444555678889999999999999999998899999999


Q ss_pred             eeCCCccCC
Q 025259          246 VVAGGMASR  254 (255)
Q Consensus       246 ~~dgG~~~~  254 (255)
                      .+|||.+..
T Consensus       233 ~vdgG~~~~  241 (245)
T 1uls_A          233 FVDGGRTIG  241 (245)
T ss_dssp             EESTTTTTT
T ss_pred             EECCCcccC
Confidence            999998653

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.4e-47  Score=315.71  Aligned_cols=243  Identities=26%  Similarity=0.393  Sum_probs=214.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+  ++..+++.+.+.++.++.+|++|+++++++++++.+++|
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            367999999999999999999999999999999999876  556666766677899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+++|++
T Consensus        79 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (255)
T 2q2v_A           79 GVDILVNNAGIQH-VAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHG  157 (255)
T ss_dssp             SCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHH
Confidence            9999999999865 66788899999999999999999999999999985  34799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHH-------HHHh-hccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAV-------RKAL-EGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~-------~~~~-~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++|+++++.|+++ +|+||+|+||+++|++...... .+..       .... ....|.+++.+|+|+|+.++||+++.
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~  237 (255)
T 2q2v_A          158 VVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCSEA  237 (255)
T ss_dssp             HHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCCc
Confidence            99999999999998 9999999999999998654321 0111       1223 45568889999999999999999998


Q ss_pred             CCCccccEEeeCCCccCC
Q 025259          237 ASYITGETLVVAGGMASR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+++|++|.+|||.+.+
T Consensus       238 ~~~~tG~~~~vdgG~~~~  255 (255)
T 2q2v_A          238 GSQVRGAAWNVDGGWLAQ  255 (255)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             cCCCCCCEEEECCCccCC
Confidence            899999999999998753

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-47  Score=319.13  Aligned_cols=246  Identities=23%  Similarity=0.319  Sum_probs=206.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++.+|++|||||++|||++++++|+++|++|++++|+.+. .+...+.+++.+.++.++.||++|+++++++++++.+
T Consensus         2 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   81 (264)
T 3i4f_A            2 SLGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMS   81 (264)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            356778999999999999999999999999999998777554 4455555555567899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCC-CCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCc-Cc-cCCCCCChhh
Q 025259           86 KYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSI-AG-YQPPSAMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~-~~-~~~~~~~~~y  160 (255)
                      .++++|+||||||.. ....++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||. .+ ..+.++...|
T Consensus        82 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           82 HFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             HhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchh
Confidence            999999999999942 2256788999999999999999999999999999985  45799999988 43 4567788999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+++++|+++++.|+++ ||+||+|+||+++|++.....  ++.........|.+++.+|+|+|+.++||+++...+
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~r~~~~~dva~~v~~l~s~~~~~  239 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATI--QEARQLKEHNTPIGRSGTGEDIARTISFLCEDDSDM  239 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCH--HHHHHC--------CCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhcc--HHHHHHHhhcCCCCCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999998 999999999999999876542  344455556678899999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||++.+
T Consensus       240 itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          240 ITGTIIEVTGAVDVI  254 (264)
T ss_dssp             CCSCEEEESCSCCCC
T ss_pred             CCCcEEEEcCceeec
Confidence            999999999999865

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=8.1e-48  Score=320.41  Aligned_cols=236  Identities=29%  Similarity=0.421  Sum_probs=210.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .|+++++|++|||||++|||++++++|+++|++|++++|+.+.+++           ...+.+|+++.++++++++++.+
T Consensus        22 ~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~-----------~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           22 SMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAA-----------DLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             ----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCC-----------SEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHh-----------hhccCcCCCCHHHHHHHHHHHHH
Confidence            3567999999999999999999999999999999999998765321           23458999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        91 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  169 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVIS-RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLT  169 (266)
T ss_dssp             HHSCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHH
T ss_pred             hcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHH
Confidence            9999999999999876 67888999999999999999999999999999985  46899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      |+|+++|+++++.|+++ ||+||+|+||+++|++.....     ...+..+......|.+++.+|+|+|++++||+++.+
T Consensus       170 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~  249 (266)
T 3uxy_A          170 KAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPEDIADVVLFLASDAA  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999998 999999999999999875432     123344667778899999999999999999999999


Q ss_pred             CCccccEEeeCCCccC
Q 025259          238 SYITGETLVVAGGMAS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      .++||++|.+|||.++
T Consensus       250 ~~itG~~i~vdGG~~~  265 (266)
T 3uxy_A          250 RYLCGSLVEVNGGKAV  265 (266)
T ss_dssp             TTCCSCEEEESTTCCC
T ss_pred             cCCcCCEEEECcCEeC
Confidence            9999999999999875

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.1e-47  Score=322.65  Aligned_cols=235  Identities=22%  Similarity=0.331  Sum_probs=213.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-------HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-------NVDKAVEKLKALGIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   79 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+       .+++..+++++.+.++.+++||++|+++++++
T Consensus         4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~   83 (285)
T 3sc4_A            4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA   83 (285)
T ss_dssp             --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35688999999999999999999999999999999999977       57777888888888999999999999999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCC-CC
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPP-SA  156 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~-~~  156 (255)
                      ++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+. ++
T Consensus        84 ~~~~~~~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~  162 (285)
T 3sc4_A           84 VAKTVEQFGGIDICVNNASAIN-LGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLR  162 (285)
T ss_dssp             HHHHHHHHSCCSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCC
Confidence            9999999999999999999875 778999999999999999999999999999999963  4799999999998876 78


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCC-cccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ...|++||+++++|+++++.|+++ |||||+|+|| +++|++.....         ....+.+++.+|+|+|+.++||++
T Consensus       163 ~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~~---------~~~~~~~r~~~pedvA~~~~~l~s  233 (285)
T 3sc4_A          163 PTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNLL---------GGDEAMARSRKPEVYADAAYVVLN  233 (285)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHHH---------TSCCCCTTCBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhhc---------cccccccCCCCHHHHHHHHHHHhC
Confidence            899999999999999999999998 9999999999 69999865432         233467889999999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 025259          235 DDASYITGETLVVAGGMA  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +.+ ++||+.+.+|||..
T Consensus       234 ~~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          234 KPS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             SCT-TCCSCEEEHHHHHH
T ss_pred             Ccc-cccceEEEEcCchh
Confidence            988 99999999999864

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=3.9e-47  Score=319.77  Aligned_cols=242  Identities=29%  Similarity=0.389  Sum_probs=212.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHH-HcCCeEEEEEecCCC----HHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLK-ALGIEVIGIICHVSN----EQHRKNLI   80 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~-~~~~~~~~~~~D~~~----~~~~~~~~   80 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+. +.+++..+++. ..+.++.++.+|+++    ++++++++
T Consensus        18 ~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~   97 (288)
T 2x9g_A           18 GSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEII   97 (288)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHH
Confidence            3468899999999999999999999999999999999998 88888888887 557789999999999    99999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCc-----CC-----CCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeE
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADL-----LK-----TKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSV  142 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~i  142 (255)
                      +++.+.+|++|+||||||... ..++     .+     .+.++|++.+++|+.+++.+++++.|+|++        .++|
T Consensus        98 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~i  176 (288)
T 2x9g_A           98 NSCFRAFGRCDVLVNNASAFY-PTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSI  176 (288)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEE
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEE
Confidence            999999999999999999865 4555     56     888999999999999999999999999864        5699


Q ss_pred             EEEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCC-C
Q 025259          143 VFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL-G  220 (255)
Q Consensus       143 v~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~  220 (255)
                      |++||..+..+.++...|++||+++++|+++++.|+++ |||||+|+||+++|++ . .  .++.........|.+++ .
T Consensus       177 v~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~--~~~~~~~~~~~~p~~r~~~  252 (288)
T 2x9g_A          177 VNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M--GEEEKDKWRRKVPLGRREA  252 (288)
T ss_dssp             EEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S--CHHHHHHHHHTCTTTSSCC
T ss_pred             EEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c--ChHHHHHHHhhCCCCCCCC
Confidence            99999999999999999999999999999999999998 9999999999999998 3 2  12233444455688888 9


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|+|+.++||+++...++||++|.+|||...
T Consensus       253 ~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          253 SAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             CHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            999999999999999999999999999999864

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-47  Score=319.46  Aligned_cols=243  Identities=32%  Similarity=0.474  Sum_probs=213.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.    ++.++.||++|+++++++++++.++
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~~~~   79 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELP----GAVFILCDVTQEDDVKTLVSETIRR   79 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCT----TEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----CCeEEEcCCCCHHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999999999888776655442    3788999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|+ ..++||++||..+..+.++...|++||+
T Consensus        80 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (270)
T 1yde_A           80 FGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKG  159 (270)
T ss_dssp             HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHH
Confidence            999999999999865456788899999999999999999999999999985 4689999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---CH-HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---ND-AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      ++++|+++++.|+++ |||||+|+||+++|++......   .. ..........|.+++.+|+|+|+.+.||+++ ..++
T Consensus       160 a~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~~L~s~-~~~i  238 (270)
T 1yde_A          160 AVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFC  238 (270)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTC
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHHHHHHHHHHccc-CCCc
Confidence            999999999999998 9999999999999998754321   11 1122223456889999999999999999997 7899


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      ||++|.+|||.+..
T Consensus       239 tG~~i~vdGG~~~~  252 (270)
T 1yde_A          239 TGIELLVTGGAELG  252 (270)
T ss_dssp             CSCEEEESTTTTSC
T ss_pred             CCCEEEECCCeecc
Confidence            99999999998653

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=4.5e-47  Score=317.39  Aligned_cols=241  Identities=32%  Similarity=0.425  Sum_probs=210.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHc-CCeEEEEEecCCCH----HHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKAL-GIEVIGIICHVSNE----QHRKNLID   81 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~   81 (255)
                      .++++|++|||||++|||++++++|+++|++|++++| +++.+++..+++++. +.++.++.+|++++    ++++++++
T Consensus         7 ~~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            7 EASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ----CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             hccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            4578999999999999999999999999999999999 888888888888765 67899999999999    99999999


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCH-----------HHHHHHHHHHhHHHHHHHHHHHhccc-CC------CeEE
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKE-----------SVLDKLWEINVKSSILLMQDAAPHMQ-KG------SSVV  143 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~~~~~~~~~l~-~~------~~iv  143 (255)
                      ++.+.+|++|+||||||... ..++.+.+.           ++|++++++|+.+++.+++++.|+|+ ..      ++||
T Consensus        87 ~~~~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv  165 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVV  165 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEE
T ss_pred             HHHHhcCCCCEEEECCCCCC-CCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEE
Confidence            99999999999999999875 567778888           99999999999999999999999985 33      7999


Q ss_pred             EEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCC-CCC
Q 025259          144 FISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNR-LGT  221 (255)
Q Consensus       144 ~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~  221 (255)
                      ++||..+..+.++...|++||++++.|+++++.|+++ ||+||+|+||+++|+  .. . .++.........|.++ +.+
T Consensus       166 ~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~-~-~~~~~~~~~~~~p~~r~~~~  241 (276)
T 1mxh_A          166 NLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PA-M-PQETQEEYRRKVPLGQSEAS  241 (276)
T ss_dssp             EECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SS-S-CHHHHHHHHTTCTTTSCCBC
T ss_pred             EECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC--cc-C-CHHHHHHHHhcCCCCCCCCC
Confidence            9999999999999999999999999999999999998 999999999999998  22 1 2344444555678888 999


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+|+.++||+++...+++|++|.+|||.++
T Consensus       242 ~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             HHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            99999999999999889999999999999764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=6.5e-47  Score=313.76  Aligned_cols=248  Identities=30%  Similarity=0.450  Sum_probs=223.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |++++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++...+.++.++.+|++++++++++++++.
T Consensus         1 m~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (261)
T 1gee_A            1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            456789999999999999999999999999999999999 8888888888888777889999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +.++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++   .++||++||..+..+.++...|+
T Consensus        81 ~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (261)
T 1gee_A           81 KEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH
Confidence            99999999999999865 567788999999999999999999999999999853   57999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||++++.++++++.|+++ +|++++|.||+++|++.......+..........|.+++.+|+|+|+.+++|+++...++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~  239 (261)
T 1gee_A          160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999988 999999999999999876543334444445556678889999999999999999888899


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      +|++|.+|||...+
T Consensus       240 ~G~~~~v~gg~~~~  253 (261)
T 1gee_A          240 TGITLFADGGMTLY  253 (261)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             CCcEEEEcCCcccC
Confidence            99999999998753

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=5.6e-47  Score=318.37  Aligned_cols=245  Identities=25%  Similarity=0.322  Sum_probs=213.3

Q ss_pred             ccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||+  +|||++++++|+++|++|++++|+.+ .++..+++.+...++.++.+|++++++++++++++.+
T Consensus        17 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~   95 (285)
T 2p91_A           17 GLLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEE   95 (285)
T ss_dssp             CTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             hccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            35899999999999  99999999999999999999999985 4445555554323467899999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhH
Q 025259           86 KYGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+|++|+||||||....   ..++.+.+.++|++.+++|+.+++.+++++.|+|+ +.++||++||..+..+.++...|+
T Consensus        96 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  175 (285)
T 2p91_A           96 NWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMG  175 (285)
T ss_dssp             HTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHH
Confidence            99999999999998642   25677899999999999999999999999999996 568999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+++++|+++++.|+++ ||+||+|+||+++|++.......+...+......|.+++.+|+|+|+.++||+++...++
T Consensus       176 ~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~s~~~~~~  255 (285)
T 2p91_A          176 IAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIEDVGDTAVFLCSDWARAI  255 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCcccCC
Confidence            9999999999999999988 999999999999999865432223344445556788899999999999999999888999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|++|.+|||...
T Consensus       256 tG~~~~vdgg~~~  268 (285)
T 2p91_A          256 TGEVVHVDNGYHI  268 (285)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             CCCEEEECCCccc
Confidence            9999999999764

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=1.5e-47  Score=316.74  Aligned_cols=239  Identities=28%  Similarity=0.389  Sum_probs=212.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+.+|
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            478999999999999999999999999999999999988877766554   45788999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||++
T Consensus        79 ~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  157 (254)
T 1hdc_A           79 SVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHH
Confidence            9999999999865 66788899999999999999999999999999985  35799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCC-ChHHHHHHHHHhcCCCCCCccccE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG-TTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      ++.|+++++.|+++ +|+||+|+||+++|++.......  ..+......|.+++. +|+|+|+.++||+++...+++|++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~p~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~  235 (254)
T 1hdc_A          158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR--QGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC--CSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchh--HHHHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCCCCCE
Confidence            99999999999988 99999999999999987653211  111222345677888 999999999999999889999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      +.+|||...
T Consensus       236 ~~vdgG~~~  244 (254)
T 1hdc_A          236 LAVDGGWTT  244 (254)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccc
Confidence            999999764

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=4e-47  Score=325.14  Aligned_cols=241  Identities=28%  Similarity=0.362  Sum_probs=215.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHH-HcCCeEEEEEecCCCHH-----------
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLK-ALGIEVIGIICHVSNEQ-----------   74 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~-----------   74 (255)
                      .++++|++|||||++|||++++++|+++|++|++++ |+.+.+++..+++. ..+.++.++.+|+++++           
T Consensus        42 ~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~  121 (328)
T 2qhx_A           42 TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSA  121 (328)
T ss_dssp             ---CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------C
T ss_pred             cccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccc
Confidence            458899999999999999999999999999999999 99999988888887 55678999999999999           


Q ss_pred             ------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCC--------------HHHHHHHHHHHhHHHHHHHHHHHh
Q 025259           75 ------HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTK--------------ESVLDKLWEINVKSSILLMQDAAP  134 (255)
Q Consensus        75 ------~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~~~~~~~~  134 (255)
                            +++++++++.+.+|++|+||||||... ..++.+.+              .++|++++++|+.+++.++++++|
T Consensus       122 ~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~  200 (328)
T 2qhx_A          122 PVTLFTRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAH  200 (328)
T ss_dssp             CBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred             ccccHHHHHHHHHHHHHhcCCCCEEEECCCCCC-CCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence                  999999999999999999999999875 56777788              999999999999999999999999


Q ss_pred             ccc--C------CCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH
Q 025259          135 HMQ--K------GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA  205 (255)
Q Consensus       135 ~l~--~------~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~  205 (255)
                      +|+  +      .++||++||..+..+.++...|++||++++.|+++++.|+++ +|+||+|.||+++|++ ...   +.
T Consensus       201 ~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~---~~  276 (328)
T 2qhx_A          201 RVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP---PA  276 (328)
T ss_dssp             HHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC---HH
T ss_pred             HHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc---HH
Confidence            985  3      579999999999999999999999999999999999999998 9999999999999998 321   33


Q ss_pred             HHHHhhccCCCC-CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          206 VRKALEGKTLLN-RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       206 ~~~~~~~~~~~~-~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+......|.+ ++.+|+|+|+.++||+++...++||++|.+|||+.+
T Consensus       277 ~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  325 (328)
T 2qhx_A          277 VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  325 (328)
T ss_dssp             HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCccc
Confidence            444455667888 899999999999999999899999999999999864

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=3.4e-47  Score=314.30  Aligned_cols=237  Identities=19%  Similarity=0.223  Sum_probs=196.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |.+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.||++|+++++++++++.+
T Consensus         1 M~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (252)
T 3h7a_A            1 MSLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADA   80 (252)
T ss_dssp             ----CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHh
Confidence            34578999999999999999999999999999999999999999999999998888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      . |++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        81 ~-g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  158 (252)
T 3h7a_A           81 H-APLEVTIFNVGANV-NFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASA  158 (252)
T ss_dssp             H-SCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHH
T ss_pred             h-CCceEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHH
Confidence            9 99999999999876 77889999999999999999999999999999985  45799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEE-EEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRV-NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v-~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      |+|+++|+++++.|+++ |||| |+|+||+++|++.....+  +.........|.+ +.+|+|+|+.++||+++....++
T Consensus       159 Kaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~~-~~~pedvA~~~~~l~s~~~~~~~  235 (252)
T 3h7a_A          159 KFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE--QMFGKDALANPDL-LMPPAAVAGAYWQLYQQPKSAWT  235 (252)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEEC------------------------------CCHHHHHHHHHHHHHCCGGGBC
T ss_pred             HHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch--hhhhhhhhcCCcc-CCCHHHHHHHHHHHHhCchhcce
Confidence            99999999999999998 9999 999999999999876532  2223344445666 99999999999999998888899


Q ss_pred             ccEEee
Q 025259          242 GETLVV  247 (255)
Q Consensus       242 G~~i~~  247 (255)
                      |++...
T Consensus       236 ~~i~~~  241 (252)
T 3h7a_A          236 FEMEIR  241 (252)
T ss_dssp             SEEEEB
T ss_pred             eeEEee
Confidence            987654

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=4.9e-47  Score=316.63  Aligned_cols=241  Identities=27%  Similarity=0.396  Sum_probs=207.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++|++|||||++|||++++++|+++|++|+++ .|+.+.+++..+++++.+.++.++.+|++++++++++++++.+.++
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            358999999999999999999999999998776 8888888888899988888999999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCC-CChhhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPS-AMAMYGV  162 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~-~~~~y~~  162 (255)
                      ++|+||||||......++.+.+.++|++++++|+.+++.++++++|.|++     .++||++||..+..+.+ +...|++
T Consensus       104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            99999999998764578889999999999999999999999999998853     57899999999987766 6788999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ ||+|++|.||+++|++..... .++.........|.+++.+|+|+|+.++||+++...+++
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~edvA~~i~~l~s~~~~~~t  262 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGG-LPDRAREMAPSVPMQRAGMPEEVADAILYLLSPSASYVT  262 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------CCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccC-ChHHHHHHhhcCCcCCCcCHHHHHHHHHHHhCCcccccc
Confidence            999999999999999998 999999999999999876532 233344555667888999999999999999999999999


Q ss_pred             ccEEeeCCCc
Q 025259          242 GETLVVAGGM  251 (255)
Q Consensus       242 G~~i~~dgG~  251 (255)
                      |++|.+|||+
T Consensus       263 G~~i~vdgG~  272 (272)
T 4e3z_A          263 GSILNVSGGR  272 (272)
T ss_dssp             SCEEEESTTC
T ss_pred             CCEEeecCCC
Confidence            9999999995

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-47  Score=319.76  Aligned_cols=246  Identities=29%  Similarity=0.457  Sum_probs=206.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH---HcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK---ALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.   ..+.++.++.+|++++++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999998888888773   334578999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCC----CHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCc-cCCCCCCh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKT----KESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAG-YQPPSAMA  158 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~-~~~~~~~~  158 (255)
                      +.+|++|+||||||... ..++.+.    +.++|++.+++|+.+++.+++++.|+|+ .+++||++||..+ ..+.++..
T Consensus        82 ~~~g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  160 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAI-PDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFP  160 (278)
T ss_dssp             HHHSCCCEEEECCC--------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSH
T ss_pred             HHcCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCcc
Confidence            99999999999999864 5566677    9999999999999999999999999985 2489999999998 88889999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHH------HHHhhccCCCCCCCChHHHHHHHH
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAV------RKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      .|++||++++.|+++++.|+++ ||+||+|+||+++|++...... .+..      ........|.+++.+|+|+|+.++
T Consensus       161 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~  240 (278)
T 1spx_A          161 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIA  240 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCCcCCCCHHHHHHHHH
Confidence            9999999999999999999998 9999999999999998654211 1111      333444567889999999999999


Q ss_pred             HhcCCCCCC-ccccEEeeCCCccCC
Q 025259          231 FLASDDASY-ITGETLVVAGGMASR  254 (255)
Q Consensus       231 ~l~s~~~~~-~~G~~i~~dgG~~~~  254 (255)
                      ||+++...+ ++|++|.+|||...+
T Consensus       241 ~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          241 FLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHcCccccCcccCcEEEECCCcccc
Confidence            999887676 999999999998754

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=9.7e-48  Score=328.34  Aligned_cols=243  Identities=26%  Similarity=0.333  Sum_probs=215.3

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC----------hhHHHHHHHHHHHcCCeEEEEEecCCCH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK----------QKNVDKAVEKLKALGIEVIGIICHVSNE   73 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~D~~~~   73 (255)
                      +.+|.++++|++|||||++|||++++++|+++|++|++++|+          .+.+++..+++.+.+.++.++.||++|+
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            556778999999999999999999999999999999999998          7788889999988888999999999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEE
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFI  145 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~v  145 (255)
                      ++++++++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|++        .++||++
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~i  177 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVR-DRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINT  177 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEE
Confidence            9999999999999999999999999876 678899999999999999999999999999998852        2699999


Q ss_pred             cCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHH
Q 025259          146 SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN  224 (255)
Q Consensus       146 ss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      ||..+..+.++...|++||+|+++|+++++.|+++ |||||+|+|| +.|++..........     ......+..+|+|
T Consensus       178 sS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-----~~~~~~~~~~ped  251 (322)
T 3qlj_A          178 SSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-----TQDQDFDAMAPEN  251 (322)
T ss_dssp             CCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------CCTTCGGG
T ss_pred             cCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-----ccccccCCCCHHH
Confidence            99999999999999999999999999999999998 9999999999 999987655432211     1112234679999


Q ss_pred             HHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          225 MAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       225 va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|++++||+++.+.++||++|.+|||...
T Consensus       252 va~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          252 VSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             THHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             HHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            99999999999999999999999999864

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=5.1e-47  Score=313.39  Aligned_cols=241  Identities=28%  Similarity=0.362  Sum_probs=214.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++.+.+.+
T Consensus         2 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   78 (253)
T 1hxh_A            2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999999999999998887776666   5678999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|.|++ +++||++||..+..+.++...|++||++
T Consensus        79 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a  157 (253)
T 1hxh_A           79 GTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHH
Confidence            99999999999875 677889999999999999999999999999999863 3899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCCHHHHHH-hhc---cCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          167 LLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGNDAVRKA-LEG---KTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       167 ~~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++.|+++++.|+++   +|+||+|+||+++|++........ .... ...   ..|.+++.+|+|+|+.++||+++...+
T Consensus       158 ~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~  236 (253)
T 1hxh_A          158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKG-VSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSV  236 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTT-CCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchh-hhHHHHhhhhccCccCCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999865   799999999999999876532211 1112 333   567788999999999999999998899


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|++|.+|||...
T Consensus       237 ~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          237 MSGSELHADNSILG  250 (253)
T ss_dssp             CCSCEEEESSSCTT
T ss_pred             CCCcEEEECCCccc
Confidence            99999999999764

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=5.5e-48  Score=319.86  Aligned_cols=236  Identities=24%  Similarity=0.339  Sum_probs=197.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+...      +..+.++.++.+|++|+++++++++.+.+ 
T Consensus         4 ~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            4 SMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV------ADLGDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             ------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH------HHTCTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             cceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH------HhcCCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            45789999999999999999999999999999999999664332      23366899999999999999999998877 


Q ss_pred             cCCCcEEEECCCCCCCCC----CcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----------CCeEEEEcCcCccC
Q 025259           87 YGRIDVFVLNAAVNPYAA----DLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----------GSSVVFISSIAGYQ  152 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----------~~~iv~vss~~~~~  152 (255)
                      +|++|+||||||... ..    +..+.+.++|++++++|+.+++.++++++|+|++          .++||++||..+..
T Consensus        77 ~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGN-AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD  155 (257)
T ss_dssp             HSCEEEEEECGGGSH-HHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C
T ss_pred             hCCCCEEEECCCCCC-CcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC
Confidence            899999999999753 22    2235889999999999999999999999999864          46899999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIA  230 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~  230 (255)
                      +.++...|++||+|+++|+++++.|+++ |||||+|+||+++|++....  .++.........|. +++.+|+|+|+.++
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~r~~~p~dva~~v~  233 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL--PEEARASLGKQVPHPSRLGNPDEYGALAV  233 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC-----CHHHHHHHHHTSSSSCSCBCHHHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc--cHHHHHHHHhcCCCCCCccCHHHHHHHHH
Confidence            9889999999999999999999999998 99999999999999997654  34455556666777 89999999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCccCC
Q 025259          231 FLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ||+++  .++||++|.+|||+++.
T Consensus       234 ~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          234 HIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHC--TTCCSCEEEESTTC---
T ss_pred             HHhcC--CCCCCCEEEECCCccCC
Confidence            99976  78999999999998753

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=3.4e-47  Score=313.95  Aligned_cols=235  Identities=25%  Similarity=0.325  Sum_probs=202.8

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--C-CeEEEEEecCCCHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--G-IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~-~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  + .++.++.||+++++++++++++
T Consensus         1 M~~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   80 (250)
T 3nyw_A            1 MSLEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKD   80 (250)
T ss_dssp             ----CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHH
Confidence            345788999999999999999999999999999999999999999998888765  3 6788999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      +.+++|++|+||||||... ..++ +.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|
T Consensus        81 ~~~~~g~iD~lvnnAg~~~-~~~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  158 (250)
T 3nyw_A           81 IHQKYGAVDILVNAAAMFM-DGSL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIY  158 (250)
T ss_dssp             HHHHHCCEEEEEECCCCCC-CCCC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHH
T ss_pred             HHHhcCCCCEEEECCCcCC-CCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcch
Confidence            9999999999999999875 5556 789999999999999999999999999985  56899999999999877779999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC-CC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD-AS  238 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~-~~  238 (255)
                      ++||+++++|+++++.|+++ |||||+|+||+++|++.....          ...+.+++.+|+|+|+.+.||+++. ..
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~p~dva~~v~~l~s~~~~~  228 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG----------TPFKDEEMIQPDDLLNTIRCLLNLSENV  228 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT----------CCSCGGGSBCHHHHHHHHHHHHTSCTTE
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC----------CCcccccCCCHHHHHHHHHHHHcCCCce
Confidence            99999999999999999998 999999999999999876442          2235667899999999999999964 55


Q ss_pred             CccccEEeeCCCcc
Q 025259          239 YITGETLVVAGGMA  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      +++|.+|.+|||.-
T Consensus       229 ~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          229 CIKDIVFEMKKSII  242 (250)
T ss_dssp             ECCEEEEEEHHHHH
T ss_pred             EeeEEEEEeecccc
Confidence            68888999999853

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=2.5e-47  Score=313.61  Aligned_cols=232  Identities=26%  Similarity=0.357  Sum_probs=207.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++|++|||||++|||++++++|++ .|+.|++++|+++.          ...++.++.+|++|+++++++++.+.  ++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~----------~~~~~~~~~~Dv~~~~~v~~~~~~~~--~~   69 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF----------SAENLKFIKADLTKQQDITNVLDIIK--NV   69 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC----------CCTTEEEEECCTTCHHHHHHHHHHTT--TC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc----------ccccceEEecCcCCHHHHHHHHHHHH--hC
Confidence            4689999999999999999999999 78899999998752          12357889999999999999996554  67


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+++++||++||..+..+.++...|++||++++
T Consensus        70 ~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~  148 (244)
T 4e4y_A           70 SFDGIFLNAGILI-KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIA  148 (244)
T ss_dssp             CEEEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHH
T ss_pred             CCCEEEECCccCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHH
Confidence            9999999999875 678899999999999999999999999999999987789999999999999999999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC---------HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +|+++++.|+++ |||||+|+||+++|++.......         .+.........|.+++.+|+|+|+.++||+++.+.
T Consensus       149 ~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~~~~  228 (244)
T 4e4y_A          149 QMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSDKSK  228 (244)
T ss_dssp             HHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcCccc
Confidence            999999999998 99999999999999987654321         22455666778999999999999999999999999


Q ss_pred             CccccEEeeCCCccCC
Q 025259          239 YITGETLVVAGGMASR  254 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~~  254 (255)
                      ++||++|.+|||++.+
T Consensus       229 ~itG~~i~vdGG~~~~  244 (244)
T 4e4y_A          229 FMTGGLIPIDGGYTAQ  244 (244)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCCeEeECCCccCC
Confidence            9999999999999864

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.9e-47  Score=318.38  Aligned_cols=232  Identities=23%  Similarity=0.345  Sum_probs=205.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-------VDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.       +++..++++..+.++.++.||++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            46889999999999999999999999999999999998764       67777778777889999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCC--CCC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQP--PSA  156 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~--~~~  156 (255)
                      +++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+  .++
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~  160 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIW-LRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA  160 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCC-CCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHH
T ss_pred             HHHHHHcCCCCEEEECCCccc-CCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCC
Confidence            999999999999999999875 67888999999999999999999999999999985  3579999999998887  678


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCC-cccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPG-FVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ...|++||+++++|+++++.|+++ |||||+|+|| +++|++.....           ..+..++.+|+|+|+.++||++
T Consensus       161 ~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-----------~~~~~~~~~pedvA~~v~~l~s  229 (274)
T 3e03_A          161 HTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-----------GVDAAACRRPEIMADAAHAVLT  229 (274)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------CCCGGGSBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-----------cccccccCCHHHHHHHHHHHhC
Confidence            889999999999999999999998 9999999999 69999863221           1234457899999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 025259          235 DDASYITGETLVVAGGMA  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      +...++||++| +|||.+
T Consensus       230 ~~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          230 REAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             SCCTTCCSCEE-EHHHHH
T ss_pred             ccccccCCeEE-EcCcch
Confidence            99999999999 777754

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=1.8e-46  Score=311.35  Aligned_cols=237  Identities=28%  Similarity=0.407  Sum_probs=212.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++..   ++.++.+|++++++++++++++.++
T Consensus         2 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~   78 (260)
T 1nff_A            2 SGRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD---AARYVHLDVTQPAQWKAAVDTAVTA   78 (260)
T ss_dssp             CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGG---GEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc---CceEEEecCCCHHHHHHHHHHHHHH
Confidence            3568899999999999999999999999999999999999888776665532   4788999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||
T Consensus        79 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           79 FGGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             HSCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHH
Confidence            999999999999875 66788899999999999999999999999999985  457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.|+++++.|+++ ||+||+|.||+++|++.. . ..+    ... ..|.+++.+|+|+|+.+.|++++...+++|+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~~~----~~~-~~~~~~~~~~~dvA~~v~~l~s~~~~~~~G~  230 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-VPE----DIF-QTALGRAAEPVEVSNLVVYLASDESSYSTGA  230 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-SCT----TCS-CCSSSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-chh----hHH-hCccCCCCCHHHHHHHHHHHhCccccCCcCC
Confidence            9999999999999998 999999999999999864 2 111    111 4577889999999999999999988999999


Q ss_pred             EEeeCCCccCC
Q 025259          244 TLVVAGGMASR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      ++.+|||.+..
T Consensus       231 ~~~v~gG~~~~  241 (260)
T 1nff_A          231 EFVVDGGTVAG  241 (260)
T ss_dssp             EEEESTTGGGS
T ss_pred             EEEECCCeecc
Confidence            99999998754

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-46  Score=311.22  Aligned_cols=239  Identities=24%  Similarity=0.405  Sum_probs=203.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.||++|+++++++++++.+.+|+
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            46899999999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+..+.++...|++||+++
T Consensus        82 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal  160 (264)
T 3tfo_A           82 IDVLVNNAGVMP-LSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAV  160 (264)
T ss_dssp             CCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHH
Confidence            999999999875 77889999999999999999999999999999985  568999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      ++|+++++.|+ ++||||+|+||+++|++......... ....  ........+|+|||+.++||+++...+.+|+++..
T Consensus       161 ~~l~~~la~e~-~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~--~~~~~~~~~pedvA~~v~~l~s~~~~~~~~~i~i~  236 (264)
T 3tfo_A          161 RAISDGLRQES-TNIRVTCVNPGVVESELAGTITHEET-MAAM--DTYRAIALQPADIARAVRQVIEAPQSVDTTEITIR  236 (264)
T ss_dssp             HHHHHHHHHHC-SSEEEEEEEECCC--------------------------CCCHHHHHHHHHHHHHSCTTEEEEEEEEE
T ss_pred             HHHHHHHHHhC-CCCEEEEEecCCCcCcccccccchhH-HHHH--HhhhccCCCHHHHHHHHHHHhcCCccCccceEEEe
Confidence            99999999998 59999999999999998765432211 1100  01112357999999999999999999999999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      ++|...
T Consensus       237 p~~~~~  242 (264)
T 3tfo_A          237 PTASGN  242 (264)
T ss_dssp             ECC---
T ss_pred             cCcccc
Confidence            988653

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=3.7e-46  Score=312.70  Aligned_cols=242  Identities=24%  Similarity=0.391  Sum_probs=213.5

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +++++++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++++++++++++++
T Consensus        22 m~~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~   98 (281)
T 3ppi_A           22 MVTIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAA   98 (281)
T ss_dssp             --CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHH
Confidence            44567899999999999999999999999999999999999999888877766   567999999999999999999999


Q ss_pred             HHHcCCCcEEEEC-CCCCCCCCCc-----CCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--------CCCeEEEEcCcC
Q 025259           84 VEKYGRIDVFVLN-AAVNPYAADL-----LKTKESVLDKLWEINVKSSILLMQDAAPHMQ--------KGSSVVFISSIA  149 (255)
Q Consensus        84 ~~~~g~~d~lv~~-ag~~~~~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--------~~~~iv~vss~~  149 (255)
                       ++++++|++||| +|... ...+     .+.+.++|++.+++|+.+++.+++++.+.+.        +.++||++||..
T Consensus        99 -~~~~~id~lv~~aag~~~-~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~  176 (281)
T 3ppi_A           99 -NQLGRLRYAVVAHGGFGV-AQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIA  176 (281)
T ss_dssp             -TTSSEEEEEEECCCCCCC-CCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGG
T ss_pred             -HHhCCCCeEEEccCcccc-cccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEeccc
Confidence             788999999999 55433 3333     4688999999999999999999999999884        356999999999


Q ss_pred             ccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHH
Q 025259          150 GYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAA  227 (255)
Q Consensus       150 ~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~  227 (255)
                      +..+.++...|++||+|+++|+++++.|+++ ||+|++|+||+++|++....  .++.........+. +++.+|+|+|+
T Consensus       177 ~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~--~~~~~~~~~~~~~~~~~~~~pedvA~  254 (281)
T 3ppi_A          177 GYEGQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV--GEEALAKFAANIPFPKRLGTPDEFAD  254 (281)
T ss_dssp             GTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT--CHHHHHHHHHTCCSSSSCBCHHHHHH
T ss_pred             ccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc--cHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999999999998 99999999999999998764  34455556666676 88999999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .++||+++  .+++|++|.+|||...+
T Consensus       255 ~v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          255 AAAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHHcC--CCcCCcEEEECCCcccC
Confidence            99999975  68999999999998753

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=1.2e-46  Score=310.59  Aligned_cols=235  Identities=26%  Similarity=0.349  Sum_probs=192.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.        ++.+  +.++.+|++|+++++++++++.+++
T Consensus         3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~--~~~~~~D~~d~~~~~~~~~~~~~~~   72 (250)
T 2fwm_X            3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ--------EQYP--FATEVMDVADAAQVAQVCQRLLAET   72 (250)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS--------SCCS--SEEEECCTTCHHHHHHHHHHHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh--------hcCC--ceEEEcCCCCHHHHHHHHHHHHHHc
Confidence            35789999999999999999999999999999999998752        1122  6788999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||+
T Consensus        73 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           73 ERLDALVNAAGILR-MGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             SCCCEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHH
Confidence            99999999999865 66788999999999999999999999999999985  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHH-Hhhc-------cCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRK-ALEG-------KTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++.|+++++.|+++ +||||+|+||+++|++.......+...+ ....       ..|.+++.+|+|+|+.++||+++.
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEIANTILFLASDL  231 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------CHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCcCHHHHHHHHHHHhCcc
Confidence            999999999999998 9999999999999998654321111112 2222       457788999999999999999998


Q ss_pred             CCCccccEEeeCCCccC
Q 025259          237 ASYITGETLVVAGGMAS  253 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~  253 (255)
                      ..+++|++|.+|||.++
T Consensus       232 ~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          232 ASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             GTTCCSCEEEESTTTTT
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999864

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.8e-47  Score=312.90  Aligned_cols=230  Identities=30%  Similarity=0.413  Sum_probs=205.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+..+         ..++.++.+|++|+++++++++++.++
T Consensus        23 m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           23 MMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA---------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS---------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc---------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999999999999999999999999999999999875432         236889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC--CCCCChhhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ--PPSAMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~--~~~~~~~y~~  162 (255)
                      +|++|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+..  +.++...|++
T Consensus        94 ~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~  172 (260)
T 3un1_A           94 FGRIDSLVNNAGVFL-AKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASL  172 (260)
T ss_dssp             HSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHH
T ss_pred             CCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHH
Confidence            999999999999875 67888999999999999999999999999999985  357899999988764  4456689999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ |||||+|+||+++|++...     +.........|.+++.+|+|||++++||  .++.+++
T Consensus       173 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~~~~~~~~~~p~~r~~~~~dva~av~~L--~~~~~it  245 (260)
T 3un1_A          173 TKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-----ETHSTLAGLHPVGRMGEIRDVVDAVLYL--EHAGFIT  245 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-----GGHHHHHTTSTTSSCBCHHHHHHHHHHH--HHCTTCC
T ss_pred             HHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-----HHHHHHhccCCCCCCcCHHHHHHHHHHh--cccCCCC
Confidence            999999999999999999 9999999999999998643     2345556778999999999999999999  5678999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||.+.
T Consensus       246 G~~i~vdGG~~~  257 (260)
T 3un1_A          246 GEILHVDGGQNA  257 (260)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECCCeec
Confidence            999999999875

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=4.2e-46  Score=320.55  Aligned_cols=233  Identities=22%  Similarity=0.342  Sum_probs=211.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-------HHHHHHHHHHcCCeEEEEEecCCCHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-------VDKAVEKLKALGIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~   79 (255)
                      +.+|++|++|||||++|||++++++|+++|++|++++|+.+.       +++..+++++.+.++.++.||++|+++++++
T Consensus        40 ~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~  119 (346)
T 3kvo_A           40 TGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAA  119 (346)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHH
T ss_pred             CCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHH
Confidence            357899999999999999999999999999999999999774       6677888888888999999999999999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCC--CC
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQP--PS  155 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~--~~  155 (255)
                      ++++.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|++  .++||++||..+..+  .+
T Consensus       120 ~~~~~~~~g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~  198 (346)
T 3kvo_A          120 VEKAIKKFGGIDILVNNASAIS-LTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFK  198 (346)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTS
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCC
Confidence            9999999999999999999875 778899999999999999999999999999999964  479999999999877  78


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCc-ccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGF-VPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      +...|++||+++++|+++++.|++.+|+||+|+||+ ++|++.....          ...+.+++.+|+|+|++++||++
T Consensus       199 ~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~~~~----------~~~~~~r~~~pedvA~~v~~L~s  268 (346)
T 3kvo_A          199 QHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMDMLG----------GPGIESQCRKVDIIADAAYSIFQ  268 (346)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHHHHC----------C--CGGGCBCTHHHHHHHHHHHT
T ss_pred             CchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHHhhc----------cccccccCCCHHHHHHHHHHHHh
Confidence            899999999999999999999998889999999995 9998765332          22356788999999999999999


Q ss_pred             CCCCCccccEEeeCCCcc
Q 025259          235 DDASYITGETLVVAGGMA  252 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~  252 (255)
                      + ..++||+++ +|||..
T Consensus       269 ~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          269 K-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             S-CTTCCSCEE-EHHHHH
T ss_pred             c-CCCCCceEE-ECCcEe
Confidence            9 899999999 999954

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=2.7e-45  Score=303.77  Aligned_cols=246  Identities=29%  Similarity=0.400  Sum_probs=220.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|++|+++++++++++.+.+
T Consensus         9 ~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   88 (260)
T 3awd_A            9 LRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE   88 (260)
T ss_dssp             GCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46889999999999999999999999999999999999998888888888777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC--hhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM--AMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~--~~y~~s  163 (255)
                      +++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++.  ..|+++
T Consensus        89 ~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~s  168 (260)
T 3awd_A           89 GRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNAS  168 (260)
T ss_dssp             SCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHH
Confidence            99999999999764356778899999999999999999999999999885  46799999999988877766  899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.|+++ +|++++|.||+++|++.......+..........|.+++.+|+|+|+.+.+++++...+++|
T Consensus       169 K~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  248 (260)
T 3awd_A          169 KAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVASVVQFLASDAASLMTG  248 (260)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHHHHHHHhCchhccCCC
Confidence            99999999999999988 99999999999999987622223444455555678888999999999999999988889999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||...
T Consensus       249 ~~~~v~gg~~~  259 (260)
T 3awd_A          249 AIVNVDAGFTV  259 (260)
T ss_dssp             CEEEESTTTTT
T ss_pred             cEEEECCceec
Confidence            99999999763

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=5.1e-46  Score=308.35  Aligned_cols=239  Identities=23%  Similarity=0.296  Sum_probs=211.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGL---EGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++++|++|||||++|||++++++|++   +|++|++++|+.+.+++..+++.+.  +.++.++.+|++++++++++++++
T Consensus         3 ~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   82 (259)
T 1oaa_A            3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence            57899999999999999999999999   8999999999999999888888765  568999999999999999999999


Q ss_pred             HH--HcCCCc--EEEECCCCCCC-CCCcCC-CCHHHHHHHHHHHhHHHHHHHHHHHhcccCC----CeEEEEcCcCccCC
Q 025259           84 VE--KYGRID--VFVLNAAVNPY-AADLLK-TKESVLDKLWEINVKSSILLMQDAAPHMQKG----SSVVFISSIAGYQP  153 (255)
Q Consensus        84 ~~--~~g~~d--~lv~~ag~~~~-~~~~~~-~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~----~~iv~vss~~~~~~  153 (255)
                      .+  .+|++|  +||||||.... ..++.+ .+.++|++++++|+.+++.++++++|+|++.    ++||++||..+..+
T Consensus        83 ~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~  162 (259)
T 1oaa_A           83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCC
Confidence            98  678899  99999998542 245667 7899999999999999999999999999653    68999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc---CCHHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL---GNDAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      .++...|++||+++++|+++++.|+++ ||||+|+||+++|+|.....   ..++..+......|.+++.+|+|+|+.++
T Consensus       163 ~~~~~~Y~asKaa~~~~~~~la~e~~~-i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~  241 (259)
T 1oaa_A          163 YKGWGLYCAGKAARDMLYQVLAAEEPS-VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKLL  241 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHHH
T ss_pred             CCCccHHHHHHHHHHHHHHHHHhhCCC-ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhcCCcCCHHHHHHHHH
Confidence            999999999999999999999999976 99999999999999876532   13334444555567889999999999999


Q ss_pred             HhcCCCCCCccccEEeeCC
Q 025259          231 FLASDDASYITGETLVVAG  249 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dg  249 (255)
                      ||+++ ..++||++|.+||
T Consensus       242 ~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          242 GLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHH-CCSCTTEEEETTC
T ss_pred             HHHhh-ccccCCcEEeccC
Confidence            99985 6899999999997

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.6e-45  Score=305.86  Aligned_cols=237  Identities=31%  Similarity=0.408  Sum_probs=206.8

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +-|.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+.++.++.+|++++++++++++++.
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            34567899999999999999999999999999999999999999999999998888899999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +.+|++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++
T Consensus       102 ~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  181 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTA  181 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHH
T ss_pred             HhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHH
Confidence            99999999999999854467888999999999999999999999999999884  5689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +|+|++|+||+++|++......          ..+..++.+|+|+|+.+.||+++....++
T Consensus       182 sKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~p~dvA~~v~~l~s~~~~~~~  251 (262)
T 3rkr_A          182 SKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLSA----------KKSALGAIEPDDIADVVALLATQADQSFI  251 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------------CCCHHHHHHHHHHHHTCCTTCCE
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccccc----------ccccccCCCHHHHHHHHHHHhcCcccccc
Confidence            999999999999999998 9999999999999998754321          12456688999999999999999999999


Q ss_pred             ccEEeeCCCc
Q 025259          242 GETLVVAGGM  251 (255)
Q Consensus       242 G~~i~~dgG~  251 (255)
                      |+++..+.|.
T Consensus       252 g~~~i~p~~~  261 (262)
T 3rkr_A          252 SEVLVRPTLK  261 (262)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEEeccccC
Confidence            9999888763

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=9.1e-46  Score=307.75  Aligned_cols=235  Identities=30%  Similarity=0.426  Sum_probs=209.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.           +.++.++.+|++|+++++++++++.+.+
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   72 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG-----------EAKYDHIECDVTNPDQVKASIDHIFKEY   72 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC-----------SCSSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc-----------CCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999999999998754           3467889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..+.++...|++||+
T Consensus        73 g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (264)
T 2dtx_A           73 GSISVLVNNAGIES-YGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKH  151 (264)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHH
Confidence            99999999999875 677889999999999999999999999999999864  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc-----CCH----HHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL-----GND----AVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      +++.|+++++.|+++.||||+|.||+++|++.....     ..+    +..+......|.+++.+|+|+|+.++||+++.
T Consensus       152 a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~  231 (264)
T 2dtx_A          152 AVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIGKPQEVASAVAFLASRE  231 (264)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCch
Confidence            999999999999976799999999999999876532     022    23334445568889999999999999999998


Q ss_pred             CCCccccEEeeCCCccCC
Q 025259          237 ASYITGETLVVAGGMASR  254 (255)
Q Consensus       237 ~~~~~G~~i~~dgG~~~~  254 (255)
                      ..+++|++|.+|||....
T Consensus       232 ~~~~tG~~i~vdGG~~~~  249 (264)
T 2dtx_A          232 ASFITGTCLYVDGGLSIR  249 (264)
T ss_dssp             GTTCCSCEEEESTTGGGC
T ss_pred             hcCCCCcEEEECCCcccC
Confidence            899999999999998653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=2.7e-45  Score=302.05  Aligned_cols=240  Identities=30%  Similarity=0.457  Sum_probs=216.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-HHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+.+++..+++ +..+.++.++.+|++|+++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            689999999999999999999999999999999998888887777 4446679999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCC---cCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           91 DVFVLNAAVNPYAAD---LLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        91 d~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |+||||||... ..+   +.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|+++|+
T Consensus        82 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITG-NSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCC-CTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCC-CCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHH
Confidence            99999999864 444   77889999999999999999999999999985  4579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+.+ +|++++|.||+++|++.......+..........|.+++.+|+|+|+.+++++++...+++|++
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  240 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVADAVMFLAGEDATYVNGAA  240 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSTTCTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhhcccCCE
Confidence            999999999999988 9999999999999998765333444555556667888999999999999999999889999999


Q ss_pred             EeeCCCcc
Q 025259          245 LVVAGGMA  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +.+|||.+
T Consensus       241 ~~v~gG~~  248 (250)
T 2cfc_A          241 LVMDGAYT  248 (250)
T ss_dssp             EEESTTGG
T ss_pred             EEECCcee
Confidence            99999975

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=1.7e-45  Score=301.80  Aligned_cols=232  Identities=32%  Similarity=0.511  Sum_probs=207.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+..   .+++   +  +.++.+|+++ ++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~---~~~~---~--~~~~~~D~~~-~~~~~~~~~~~~~~g~id   72 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA---AQSL---G--AVPLPTDLEK-DDPKGLVKRALEALGGLH   72 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH---HHHH---T--CEEEECCTTT-SCHHHHHHHHHHHHTSCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH---HHhh---C--cEEEecCCch-HHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999999999998652   2333   3  6778999999 999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCC--CCChhhHHhHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPP--SAMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~--~~~~~y~~sKaa~  167 (255)
                      +||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.  ++...|++||+++
T Consensus        73 ~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~  151 (239)
T 2ekp_A           73 VLVHAAAVNV-RKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTAL  151 (239)
T ss_dssp             EEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHH
T ss_pred             EEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHH
Confidence            9999999875 67788999999999999999999999999999985  45799999999998877  8899999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|+++++.|+++ +|+||+|+||+++|++.......++..+......|.+++.+|+|+|+.+.||+++...+++|+.+.
T Consensus       152 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~  231 (239)
T 2ekp_A          152 LGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAAVLCGDEAEYLTGQAVA  231 (239)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCchhcCCCCCEEE
Confidence            9999999999998 999999999999999876543334444555566788899999999999999999988999999999


Q ss_pred             eCCCccC
Q 025259          247 VAGGMAS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||...
T Consensus       232 vdgG~~~  238 (239)
T 2ekp_A          232 VDGGFLA  238 (239)
T ss_dssp             ESTTTTT
T ss_pred             ECCCccc
Confidence            9999764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.3e-45  Score=301.01  Aligned_cols=251  Identities=29%  Similarity=0.455  Sum_probs=223.7

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |.+.+. +++++|++|||||+||||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|++|++++++++
T Consensus         1 m~~~~~-~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   79 (255)
T 1fmc_A            1 MFNSDN-LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             CCCGGG-GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCccC-CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHH
Confidence            455443 4688999999999999999999999999999999999999888888888877778999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +++.++++++|+||||||... ..++ +.+.++|++.+++|+.+++.+++++.|+|+  ..++||++||..+..+.++..
T Consensus        80 ~~~~~~~~~~d~vi~~Ag~~~-~~~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~  157 (255)
T 1fmc_A           80 DFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHhcCCCCEEEECCCCCC-CCCC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCc
Confidence            999999999999999999865 4445 789999999999999999999999999885  457999999999999989999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .|+++|++++.++++++.|+++ +|++++|.||+++|++..... .+..........|.+++.+|+|+|+++.+++++..
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~  236 (255)
T 1fmc_A          158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             ccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc-ChHHHHHHHhcCCcccCCCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999987 999999999999999876543 23444555556788899999999999999999888


Q ss_pred             CCccccEEeeCCCccCCC
Q 025259          238 SYITGETLVVAGGMASRL  255 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~~  255 (255)
                      .+++|++|++|||...++
T Consensus       237 ~~~~G~~~~v~gg~~~s~  254 (255)
T 1fmc_A          237 SWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             TTCCSCEEEESTTSCCCC
T ss_pred             ccCCCcEEEECCceeccC
Confidence            889999999999988654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=1.5e-45  Score=303.34  Aligned_cols=231  Identities=23%  Similarity=0.383  Sum_probs=208.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecC--CCHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHV--SNEQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~--~~~~~~~~~~~~~   83 (255)
                      +.++++|++|||||++|||++++++|+++|++|++++|+++.+++..++++..+ .+..++.+|+  +++++++++++++
T Consensus         9 ~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~   88 (247)
T 3i1j_A            9 PELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARV   88 (247)
T ss_dssp             TTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHH
T ss_pred             CccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHH
Confidence            346899999999999999999999999999999999999999999999998765 5666777777  9999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+.+|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++  .++||++||..+..+.++...|+
T Consensus        89 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  168 (247)
T 3i1j_A           89 EHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYG  168 (247)
T ss_dssp             HHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhH
Confidence            9999999999999998655678899999999999999999999999999999863  46999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          162 VTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +||+++++|+++++.|+.+  +||||+|+||+++|++.....+..          ...+...|+|+|+.++||+++++.+
T Consensus       169 ~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~~~----------~~~~~~~p~dva~~~~~l~s~~~~~  238 (247)
T 3i1j_A          169 VSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYPDE----------NPLNNPAPEDIMPVYLYLMGPDSTG  238 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHSTTS----------CGGGSCCGGGGTHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccccc----------CccCCCCHHHHHHHHHHHhCchhcc
Confidence            9999999999999999964  899999999999999876543321          2235678999999999999999999


Q ss_pred             ccccEEee
Q 025259          240 ITGETLVV  247 (255)
Q Consensus       240 ~~G~~i~~  247 (255)
                      +||++|.+
T Consensus       239 itG~~i~~  246 (247)
T 3i1j_A          239 INGQALNA  246 (247)
T ss_dssp             CCSCEEEC
T ss_pred             ccCeeecC
Confidence            99999986

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1e-46  Score=311.57  Aligned_cols=237  Identities=29%  Similarity=0.487  Sum_probs=198.1

Q ss_pred             cccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            3 KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         3 ~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ++....++++|++|||||++|||++++++|+++|++|++++|+.+.++           ++.++.+|++|++++++++++
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~~Dl~d~~~v~~~~~~   80 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE-----------GFLAVKCDITDTEQVEQAYKE   80 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-----------TSEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc-----------cceEEEecCCCHHHHHHHHHH
Confidence            455567789999999999999999999999999999999999876532           267889999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      +.+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|+  +.++||++||..+..+.++...|
T Consensus        81 ~~~~~g~iD~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y  159 (253)
T 2nm0_A           81 IEETHGPVEVLIANAGVTK-DQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANY  159 (253)
T ss_dssp             HHHHTCSCSEEEEECSCCT-TTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHH
T ss_pred             HHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHH
Confidence            9999999999999999875 66778889999999999999999999999999985  45799999999998888888999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||++++.|+++++.|+++ +|+||+|.||+++|++.....  ++..+......|.+++.+|+|+|+.+.||+++...+
T Consensus       160 ~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~p~~~~~~p~dvA~~i~~l~s~~~~~  237 (253)
T 2nm0_A          160 AASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT--DEQRANIVSQVPLGRYARPEEIAATVRFLASDDASY  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-----------CHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC--HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999998 999999999999999875431  122233445568889999999999999999998999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|++|.+|||.++
T Consensus       238 ~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          238 ITGAVIPVDGGLGM  251 (253)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCcEEEECCcccc
Confidence            99999999999764

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-46  Score=307.38  Aligned_cols=236  Identities=28%  Similarity=0.436  Sum_probs=204.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++.. ++    .++.++.+|++++++++    ++.+.+
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~----~~~~~~~~D~~~~~~~~----~~~~~~   72 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KY----PGIQTRVLDVTKKKQID----QFANEV   72 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GS----TTEEEEECCTTCHHHHH----HHHHHC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hc----cCceEEEeeCCCHHHHH----HHHHHh
Confidence            4678999999999999999999999999999999999987765543 22    26888999999999987    444567


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCC-CChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPS-AMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~-~~~~y~~sK  164 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.+ +...|++||
T Consensus        73 ~~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK  151 (246)
T 2ag5_A           73 ERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTK  151 (246)
T ss_dssp             SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHH
T ss_pred             CCCCEEEECCccCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHH
Confidence            89999999999875 66788899999999999999999999999999985  457999999999988877 889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++++.|+++++.|+++ +|+||+|.||+++|++......    ..+..+......|.+++.+|+|+|+.++||+++...+
T Consensus       152 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~s~~~~~  231 (246)
T 2ag5_A          152 AAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAY  231 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccC
Confidence            9999999999999998 9999999999999998654211    1233344455668889999999999999999999999


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      +||++|.+|||.+.
T Consensus       232 ~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          232 VTGNPVIIDGGWSL  245 (246)
T ss_dssp             CCSCEEEECTTGGG
T ss_pred             CCCCEEEECCCccC
Confidence            99999999999753

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=4.4e-45  Score=301.47  Aligned_cols=243  Identities=28%  Similarity=0.416  Sum_probs=216.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeE-EEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV-IGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++ .++.+|++|+++++++++++.
T Consensus         5 ~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            5 TVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---GAAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cccceeEEEEecCCHHHHHHHHHHHH
Confidence            445789999999999999999999999999999999999998887776666   3456 889999999999999999998


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC--hhh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM--AMY  160 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~--~~y  160 (255)
                      + ++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++.  ..|
T Consensus        82 ~-~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y  159 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIAR-LHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSY  159 (254)
T ss_dssp             H-HSCCCEEEECCCCCC-CBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHH
T ss_pred             h-hCCCcEEEECCccCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHH
Confidence            8 899999999999875 66788899999999999999999999999999885  45799999999998877777  899


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +++|++++.++++++.|+++ +|++++|.||+++|++.......+..........|.+++.+|+|+|+.+.+++++...+
T Consensus       160 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  239 (254)
T 2wsb_A          160 MASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAAALFLASPAASY  239 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCccccc
Confidence            99999999999999999988 99999999999999997755444445555556678888999999999999999988889


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||...
T Consensus       240 ~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          240 VTGAILAVDGGYTV  253 (254)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             ccCCEEEECCCEec
Confidence            99999999999764

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=4e-47  Score=325.45  Aligned_cols=244  Identities=19%  Similarity=0.197  Sum_probs=208.6

Q ss_pred             CCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHHHHHc---CCeEEEEEecCCCH--H
Q 025259           11 QGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQ---------KNVDKAVEKLKAL---GIEVIGIICHVSNE--Q   74 (255)
Q Consensus        11 ~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~---~~~~~~~~~D~~~~--~   74 (255)
                      ++|++|||||++  |||+++|++|+++|++|++++|++         +.++.....+...   ...+.+++||+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999986  999999999999999999777665         2222221211111   23478899999988  8


Q ss_pred             ------------------HHHHHHHHHHHHcCCCcEEEECCCCC-CCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhc
Q 025259           75 ------------------HRKNLIDKTVEKYGRIDVFVLNAAVN-PYAADLLKTKESVLDKLWEINVKSSILLMQDAAPH  135 (255)
Q Consensus        75 ------------------~~~~~~~~~~~~~g~~d~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  135 (255)
                                        +++++++++.+.+|++|+||||||+. ....++.+.+.++|++++++|+.+++.++++++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999974 23678899999999999999999999999999999


Q ss_pred             ccCCCeEEEEcCcCccCCCCCCh-hhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhhcCCH--------
Q 025259          136 MQKGSSVVFISSIAGYQPPSAMA-MYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQALLGND--------  204 (255)
Q Consensus       136 l~~~~~iv~vss~~~~~~~~~~~-~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~~~~~--------  204 (255)
                      |+++++||++||..+..+.++.. .|++||+|+++|+++++.|+++  +||||+|+||+++|+|........        
T Consensus       161 m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~  240 (329)
T 3lt0_A          161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----------
T ss_pred             HhhCCeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccccccccc
Confidence            98779999999999999999985 9999999999999999999976  999999999999999987653210        


Q ss_pred             -----------------------------------HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          205 -----------------------------------AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       205 -----------------------------------~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                                                         +..+......|.+++.+|+|||++++||+++.+.++||++|.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~~i~vdG  320 (329)
T 3lt0_A          241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             ccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCcEEEEcC
Confidence                                               124555667899999999999999999999999999999999999


Q ss_pred             CccCC
Q 025259          250 GMASR  254 (255)
Q Consensus       250 G~~~~  254 (255)
                      |.++.
T Consensus       321 G~~~~  325 (329)
T 3lt0_A          321 GLNIM  325 (329)
T ss_dssp             TGGGC
T ss_pred             CeeEE
Confidence            99864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=5.4e-45  Score=300.27  Aligned_cols=237  Identities=24%  Similarity=0.364  Sum_probs=209.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++...+.++.++.+|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999999999998888888777789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+ .+++||++||..+..+.++...|++||++
T Consensus        83 g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a  161 (247)
T 2jah_A           83 GGLDILVNNAGIML-LGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFG  161 (247)
T ss_dssp             SCCSEEEECCCCCC-CCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHH
Confidence            99999999999875 67888999999999999999999999999999985 23899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCC--CChHHHHHHHHHhcCCCCCCcccc
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRL--GTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++|+++++.|+++ |||||+|+||+++|++..... .......... .| +++  .+|+|+|+.++|++++...+++++
T Consensus       162 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~-~~~~~~~~~~-~~-~~~~~~~pedvA~~v~~l~s~~~~~~~~~  238 (247)
T 2jah_A          162 VNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHIT-HTATKEMYEQ-RI-SQIRKLQAQDIAEAVRYAVTAPHHATVHE  238 (247)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCC-CHHHHHHHHH-HT-TTSCCBCHHHHHHHHHHHHHSCTTEEEEE
T ss_pred             HHHHHHHHHHHhcccCcEEEEEECCCCCCcchhccc-chhhHHHHHh-cc-cccCCCCHHHHHHHHHHHhCCCccCccce
Confidence            99999999999998 999999999999999876532 2222221211 23 455  899999999999999988888887


Q ss_pred             EEeeCC
Q 025259          244 TLVVAG  249 (255)
Q Consensus       244 ~i~~dg  249 (255)
                      + .+++
T Consensus       239 i-~i~~  243 (247)
T 2jah_A          239 I-FIRP  243 (247)
T ss_dssp             E-EEEE
T ss_pred             E-EecC
Confidence            5 4443

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=1.4e-45  Score=306.62  Aligned_cols=244  Identities=30%  Similarity=0.474  Sum_probs=192.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.+|++++++++++++++.+.+
T Consensus        10 ~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   89 (266)
T 1xq1_A           10 WSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMF   89 (266)
T ss_dssp             TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999999999999998888888888777789999999999999999999999998


Q ss_pred             -CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 -GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                       +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|+++|
T Consensus        90 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  168 (266)
T 1xq1_A           90 GGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATK  168 (266)
T ss_dssp             TTCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHH
T ss_pred             CCCCcEEEECCCCCC-CCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHH
Confidence             89999999999865 66788899999999999999999999999999985  457999999999998888899999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.++++++.|+++ +|++++|.||+++|++..... .+..........|.+++.+|+|+|+.+.+|+++...+++|+
T Consensus       169 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~  247 (266)
T 1xq1_A          169 GALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQ  247 (266)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCccCc
Confidence            9999999999999988 999999999999999876543 22223333445677889999999999999999888999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||.+.
T Consensus       248 ~~~v~gG~~~  257 (266)
T 1xq1_A          248 TICVDGGLTV  257 (266)
T ss_dssp             EEECCCCEEE
T ss_pred             EEEEcCCccc
Confidence            9999999864

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=6.9e-46  Score=305.60  Aligned_cols=232  Identities=29%  Similarity=0.505  Sum_probs=199.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++.           ..+.+|++|+++++++++++.+.+
T Consensus        11 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-----------~~~~~D~~~~~~~~~~~~~~~~~~   79 (247)
T 1uzm_A           11 PPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----------FGVEVDVTDSDAVDRAFTAVEEHQ   79 (247)
T ss_dssp             CCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----------EEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-----------cCeeccCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999999987654321           138899999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|+||||||... ..++.+.+.++|++++++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|++||+
T Consensus        80 g~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~  158 (247)
T 1uzm_A           80 GPVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKA  158 (247)
T ss_dssp             SSCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHH
Confidence            99999999999875 66788999999999999999999999999999985  3479999999999999899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.|+++++.|+++ +|+||+|.||+++|++....  .+...+......|.+++.+|+|+|+.++||+++...+++|++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~~G~~  236 (247)
T 1uzm_A          159 GVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAV  236 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccCCcCCE
Confidence            999999999999998 99999999999999987643  233444455667888999999999999999998889999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||..+
T Consensus       237 i~vdgG~~~  245 (247)
T 1uzm_A          237 IPVDGGMGM  245 (247)
T ss_dssp             EEESTTTTC
T ss_pred             EEECCCccc
Confidence            999999864

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=1.2e-45  Score=304.34  Aligned_cols=237  Identities=34%  Similarity=0.524  Sum_probs=196.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   ..++.++.+|+++++++++++++    
T Consensus         9 ~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            9 MIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHT----
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHh----
Confidence            45689999999999999999999999999999999999998888777665   34788999999999998877764    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|++|||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||
T Consensus        82 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK  160 (249)
T 3f9i_A           82 TSNLDILVCNAGITS-DTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASK  160 (249)
T ss_dssp             CSCCSEEEECCC--------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHH
Confidence            478999999999875 66777889999999999999999999999999984  567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+++ +|+|++|+||+++|++....  .+...+......+.+++.+|+|+|++++||+++...+++|+
T Consensus       161 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~s~~~~~~tG~  238 (249)
T 3f9i_A          161 AGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKL--NEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQ  238 (249)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBC------C--CHHHHHHHHHHCTTCSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHcCcEEEEEecCccccCccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcCCccCCccCc
Confidence            9999999999999998 99999999999999987654  34555666677889999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||+.+
T Consensus       239 ~~~vdgG~~~  248 (249)
T 3f9i_A          239 TLHVNGGMLM  248 (249)
T ss_dssp             EEEESTTSSC
T ss_pred             EEEECCCEee
Confidence            9999999864

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=5.6e-46  Score=301.59  Aligned_cols=220  Identities=23%  Similarity=0.351  Sum_probs=196.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |+++++|++|||||++|||++++++|+++|++|++++|+.+                    +|++|+++++++++++   
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------------~D~~~~~~v~~~~~~~---   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------------LDISDEKSVYHYFETI---   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------------CCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------------cCCCCHHHHHHHHHHh---
Confidence            35688999999999999999999999999999999999875                    8999999999888754   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                       +++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|+++++||++||..+..+.++...|+++|++
T Consensus        58 -g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a  136 (223)
T 3uce_A           58 -GAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAA  136 (223)
T ss_dssp             -CSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             -CCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHH
Confidence             8999999999987447788999999999999999999999999999999888899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++|+++++.|+++ ||||+|+||+++|++.......  ....+......|.+++.+|+|+|++++|+++  +.++||++
T Consensus       137 ~~~~~~~la~e~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~--~~~~tG~~  213 (223)
T 3uce_A          137 IEATTKVLAKELAP-IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAIQ--NSYMTGTV  213 (223)
T ss_dssp             HHHHHHHHHHHHTT-SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHH--CTTCCSCE
T ss_pred             HHHHHHHHHHhhcC-cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHcc--CCCCCCcE
Confidence            99999999999988 9999999999999987654322  2234555667889999999999999999997  47899999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||..+
T Consensus       214 i~vdgG~~~  222 (223)
T 3uce_A          214 IDVDGGALL  222 (223)
T ss_dssp             EEESTTGGG
T ss_pred             EEecCCeec
Confidence            999999875

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=7.4e-46  Score=308.58  Aligned_cols=239  Identities=20%  Similarity=0.249  Sum_probs=206.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..      ..++.++.+|++|+++++++++++.+
T Consensus        10 m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~~~~~Dv~d~~~v~~~~~~~~~   83 (266)
T 3p19_A           10 MGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN------LPNTLCAQVDVTDKYTFDTAITRAEK   83 (266)
T ss_dssp             -----CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh------cCCceEEEecCCCHHHHHHHHHHHHH
Confidence            445688999999999999999999999999999999999987654432      23688999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .+|++|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        84 ~~g~iD~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~as  162 (266)
T 3p19_A           84 IYGPADAIVNNAGMML-LGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGT  162 (266)
T ss_dssp             HHCSEEEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHH
Confidence            9999999999999875 67889999999999999999999999999999985  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+++++|+++++.|+++ |||||+|+||+++|++..................|.+++.+|+|||++++|+++.....+.+
T Consensus       163 K~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~av~~l~~~~~~~~~~  242 (266)
T 3p19_A          163 KFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARAVLFAYQQPQNVCIR  242 (266)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHHHHHHHcCCCCccce
Confidence            99999999999999998 99999999999999998765432222212222347889999999999999999999998888


Q ss_pred             cEEeeCCCc
Q 025259          243 ETLVVAGGM  251 (255)
Q Consensus       243 ~~i~~dgG~  251 (255)
                      +++....+.
T Consensus       243 ~i~i~p~~~  251 (266)
T 3p19_A          243 EIALAPTKQ  251 (266)
T ss_dssp             EEEEEETTC
T ss_pred             eeEEecCCC
Confidence            888766554

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=5e-45  Score=300.60  Aligned_cols=244  Identities=27%  Similarity=0.430  Sum_probs=216.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++++++++++++.+.+.+
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP-DQIQFFQHDSSDEDGWTKLFDATEKAF   80 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc-CceEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4578999999999999999999999999999999999998887776666433 578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC---CeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG---SSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~---~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|++.   ++||++||..+..+.++...|++||
T Consensus        81 ~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           81 GPVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SSCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            99999999999865 6678889999999999999999999999999998642   6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          165 TALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       165 aa~~~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ++++.++++++.|+.  + +|++++|.||+++|++.... .............|.+++.+|+|+|+.+.+++++...+++
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL-PGAEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFAT  238 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS-TTHHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc-CchhhhHHHhhcCCCCCCcCHHHHHHHHHHHcCccccccc
Confidence            999999999999987  6 99999999999999987653 2222233344556778899999999999999998888999


Q ss_pred             ccEEeeCCCccCC
Q 025259          242 GETLVVAGGMASR  254 (255)
Q Consensus       242 G~~i~~dgG~~~~  254 (255)
                      |+++.+|||.+.+
T Consensus       239 G~~~~v~gG~~~~  251 (251)
T 1zk4_A          239 GSEFVVDGGYTAQ  251 (251)
T ss_dssp             SCEEEESTTGGGC
T ss_pred             CcEEEECCCccCc
Confidence            9999999998753

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-45  Score=306.22  Aligned_cols=243  Identities=29%  Similarity=0.480  Sum_probs=217.4

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++++.+.++.++.+|++|+++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            35678999999999999999999999999999999999999888888888877778999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|+  +.++||++||..+..+.++...|++||
T Consensus       119 ~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK  197 (285)
T 2c07_A          119 HKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSK  197 (285)
T ss_dssp             CSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHH
Confidence            999999999999875 66788899999999999999999999999999885  447999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      ++++.++++++.|+.+ +|+|++|.||+++|++....  .+...+......|.+++.+|+|+|+.+++++++...+++|+
T Consensus       198 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~G~  275 (285)
T 2c07_A          198 AGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGYINGR  275 (285)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc--CHHHHHHHHhhCCCCCCCCHHHHHHHHHHHhCCCcCCCCCC
Confidence            9999999999999988 99999999999999987543  23444555566788889999999999999999888999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      +|.+|||..
T Consensus       276 ~i~v~gG~~  284 (285)
T 2c07_A          276 VFVIDGGLS  284 (285)
T ss_dssp             EEEESTTSC
T ss_pred             EEEeCCCcc
Confidence            999999975

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=4e-45  Score=300.49  Aligned_cols=241  Identities=34%  Similarity=0.565  Sum_probs=196.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|++|||||++|||++++++|+++|++|+++ .|+++.+++..++++..+.++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999999988 678888888888888777889999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|+++|+
T Consensus        82 ~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~  160 (247)
T 2hq1_A           82 GRIDILVNNAGITR-DTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKA  160 (247)
T ss_dssp             SCCCEEEECC----------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHH
Confidence            99999999999864 56677888999999999999999999999999885  4579999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++.++++++.|+++ +|+++++.||+++|++....  .+...+......|.+++.+|+|+|+++.+++++...+++|++
T Consensus       161 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~  238 (247)
T 2hq1_A          161 GLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL--PDKVKEMYLNNIPLKRFGTPEEVANVVGFLASDDSNYITGQV  238 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc--chHHHHHHHhhCCCCCCCCHHHHHHHHHHHcCcccccccCcE
Confidence            999999999999988 99999999999999987643  233444455566788899999999999999998888999999


Q ss_pred             EeeCCCcc
Q 025259          245 LVVAGGMA  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      +++|||.+
T Consensus       239 ~~v~gG~~  246 (247)
T 2hq1_A          239 INIDGGLV  246 (247)
T ss_dssp             EEESTTC-
T ss_pred             EEeCCCcc
Confidence            99999975

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=9.6e-45  Score=298.31  Aligned_cols=243  Identities=31%  Similarity=0.525  Sum_probs=217.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+ .+.++.++.+|++|+++++++++++.+
T Consensus         2 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (248)
T 2pnf_A            2 EIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYN   81 (248)
T ss_dssp             CCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999999888888777765 467899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.++...|+++
T Consensus        82 ~~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  160 (248)
T 2pnf_A           82 LVDGIDILVNNAGITR-DKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTT  160 (248)
T ss_dssp             HSSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             hcCCCCEEEECCCCCC-CCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHH
Confidence            9999999999999865 56778889999999999999999999999999885  45799999999888888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |++++.++++++.|+.+ +|++++|.||+++|++....  ............|.+++.+|+|+|+++.+++++...+++|
T Consensus       161 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G  238 (248)
T 2pnf_A          161 KAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL--SEEIKQKYKEQIPLGRFGSPEEVANVVLFLCSELASYITG  238 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc--cHHHHHHHHhcCCCCCccCHHHHHHHHHHHhCchhhcCCC
Confidence            99999999999999988 99999999999999987643  2334444445567788999999999999999988889999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +++.+|||..
T Consensus       239 ~~~~v~gg~~  248 (248)
T 2pnf_A          239 EVIHVNGGMF  248 (248)
T ss_dssp             CEEEESTTCC
T ss_pred             cEEEeCCCcC
Confidence            9999999963

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-45  Score=305.73  Aligned_cols=233  Identities=23%  Similarity=0.286  Sum_probs=188.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.||++|+++++++++++.++
T Consensus        23 m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           23 MSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI---GDDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             -----CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---TSCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            35678999999999999999999999999999999999998888877766   467889999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCCCCCChhhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +|++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++    .++||++||..+..+.++...|++
T Consensus       100 ~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  179 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTA  179 (272)
T ss_dssp             HSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHH
Confidence            9999999999998754578899999999999999999999999999999853    479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+++++|+++++.|+++ +||||+|.||+++|++........   .......+.+++.+|+|+|++++||++.......
T Consensus       180 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~~  256 (272)
T 4dyv_A          180 TKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV---PQADLSIKVEPVMDVAHVASAVVYMASLPLDANV  256 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC---------------------------CHHHHHHHHHHHHHSCTTSCC
T ss_pred             HHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc---hhhhhcccccCCCCHHHHHHHHHHHhCCCCcCcc
Confidence            999999999999999998 999999999999999876543221   1222345677899999999999999997655544


Q ss_pred             ccEE
Q 025259          242 GETL  245 (255)
Q Consensus       242 G~~i  245 (255)
                      +++.
T Consensus       257 ~~i~  260 (272)
T 4dyv_A          257 QFMT  260 (272)
T ss_dssp             CEEE
T ss_pred             ceEE
Confidence            4443

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.8e-45  Score=304.29  Aligned_cols=245  Identities=30%  Similarity=0.444  Sum_probs=209.8

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-------CeEEEEEecCCCHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-------IEVIGIICHVSNEQHRKN   78 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~   78 (255)
                      |..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+       .++.++.+|++|++++++
T Consensus         1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   80 (264)
T 2pd6_A            1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARC   80 (264)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHH
T ss_pred             CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHH
Confidence            3456889999999999999999999999999999999999988887777665544       578899999999999999


Q ss_pred             HHHHHHHHcCCC-cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCC
Q 025259           79 LIDKTVEKYGRI-DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPP  154 (255)
Q Consensus        79 ~~~~~~~~~g~~-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~  154 (255)
                      +++.+.+.+|++ |+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++   .++||++||..+..+.
T Consensus        81 ~~~~~~~~~g~i~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~  159 (264)
T 2pd6_A           81 LLEQVQACFSRPPSVVVSCAGITQ-DEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGN  159 (264)
T ss_dssp             HHHHHHHHHSSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCC
T ss_pred             HHHHHHHHhCCCCeEEEECCCcCC-CcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCC
Confidence            999999999998 99999999875 667888999999999999999999999999998853   5799999999998898


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ++...|++||++++.++++++.|+++ +|++++|.||+++|++.....  +..........|.+++.+|+|+|+.+.+++
T Consensus       160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~dva~~~~~l~  237 (264)
T 2pd6_A          160 VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP--QKVVDKITEMIPMGHLGDPEDVADVVAFLA  237 (264)
T ss_dssp             TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCTTCSCBCHHHHHHHHHHHH
T ss_pred             CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC--HHHHHHHHHhCCCCCCCCHHHHHHHHHHHc
Confidence            99999999999999999999999988 999999999999999865431  223334445567788999999999999999


Q ss_pred             CCCCCCccccEEeeCCCccC
Q 025259          234 SDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++...+++|+.+.+|||..+
T Consensus       238 ~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          238 SEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             SGGGTTCCSCEEEESTTC--
T ss_pred             CCcccCCCCCEEEECCCcee
Confidence            98888999999999999864

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2e-44  Score=295.81  Aligned_cols=238  Identities=31%  Similarity=0.512  Sum_probs=215.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEE-EeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVI-SSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|++|||||++|||++++++|+++|++|++ .+|+++..++..++++..+.++.++.+|++++++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            689999999999999999999999999988 5899888888888887777889999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|+++|++++
T Consensus        81 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  159 (244)
T 1edo_A           81 DVVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVI  159 (244)
T ss_dssp             SEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHH
Confidence            99999999875 56778899999999999999999999999999985  4579999999999888899999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc-CCCCCCccccEEe
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA-SDDASYITGETLV  246 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~~G~~i~  246 (255)
                      .++++++.|+.+ +|++++|.||+++|++....  .+..........|.+++.+|+|+|+.+.+++ ++...+++|++|.
T Consensus       160 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~  237 (244)
T 1edo_A          160 GFSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFT  237 (244)
T ss_dssp             HHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEE
T ss_pred             HHHHHHHHHhhhcCCEEEEEeeCccccchhhhc--ChHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCCCccCCcCCCEEE
Confidence            999999999988 99999999999999987653  2334445556678888999999999999999 6777899999999


Q ss_pred             eCCCcc
Q 025259          247 VAGGMA  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       238 v~gG~~  243 (244)
T 1edo_A          238 IDGGIA  243 (244)
T ss_dssp             ESTTTT
T ss_pred             eCCCcc
Confidence            999975

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.5e-44  Score=302.42  Aligned_cols=243  Identities=29%  Similarity=0.420  Sum_probs=215.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+.++..+.++.++.+|++++++++++++++.+.+
T Consensus        30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~  109 (279)
T 3ctm_A           30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF  109 (279)
T ss_dssp             GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            46889999999999999999999999999999999999888888777777767789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcC-CCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCC--CCCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLL-KTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQP--PSAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~--~~~~~~y~~  162 (255)
                      +++|+||||||......++. +.+.++|++.+++|+.+++.+++.++|.|+  +.++||++||..+..+  .++...|++
T Consensus       110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~  189 (279)
T 3ctm_A          110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNT  189 (279)
T ss_dssp             SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHH
T ss_pred             CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHH
Confidence            99999999999865225666 788999999999999999999999999985  4589999999999887  778899999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||++++.++++++.|+++ + +|++|.||+++|++....  .+..........|.+++.+|+|+|+.+.+|+++...+++
T Consensus       190 sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s~~~~~~t  266 (279)
T 3ctm_A          190 AKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA--SKDMKAKWWQLTPLGREGLTQELVGGYLYLASNASTFTT  266 (279)
T ss_dssp             HHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC--CHHHHHHHHHHSTTCSCBCGGGTHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc--ChHHHHHHHHhCCccCCcCHHHHHHHHHHHhCccccCcc
Confidence            999999999999999998 8 999999999999987432  334444444567888999999999999999999889999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||...
T Consensus       267 G~~i~vdgG~~~  278 (279)
T 3ctm_A          267 GSDVVIDGGYTC  278 (279)
T ss_dssp             SCEEEESTTCCC
T ss_pred             CCEEEECCCeec
Confidence            999999999875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=9.2e-45  Score=301.22  Aligned_cols=244  Identities=26%  Similarity=0.377  Sum_probs=214.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++.+ .+.++.++.+|++|+++++++++++.+
T Consensus         9 ~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   88 (265)
T 1h5q_A            9 TISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDA   88 (265)
T ss_dssp             EECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999999999987766666666643 366899999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCC------
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSA------  156 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~------  156 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|++   .++||++||..+..+.++      
T Consensus        89 ~~~~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~  167 (265)
T 1h5q_A           89 DLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSL  167 (265)
T ss_dssp             HSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEEC
T ss_pred             hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccc
Confidence            9999999999999875 667888999999999999999999999999998852   378999999988765532      


Q ss_pred             -ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          157 -MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       157 -~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                       ...|++||++++.++++++.|+++ +|++++|.||+++|++....  .+..........|.+++.+|+|+|+.++++++
T Consensus       168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  245 (265)
T 1h5q_A          168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILLLS  245 (265)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHS
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc--chhHHHHHHhcCcccCCCCHHHHHHHHHhhcc
Confidence             788999999999999999999988 99999999999999987654  33444445556788889999999999999999


Q ss_pred             CCCCCccccEEeeCCCccC
Q 025259          235 DDASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+++|+.|.+|||.+.
T Consensus       246 ~~~~~~~G~~~~v~gG~~~  264 (265)
T 1h5q_A          246 DHATYMTGGEYFIDGGQLI  264 (265)
T ss_dssp             GGGTTCCSCEEEECTTGGG
T ss_pred             CchhcCcCcEEEecCCEeC
Confidence            9889999999999999875

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=7.2e-45  Score=300.62  Aligned_cols=246  Identities=31%  Similarity=0.449  Sum_probs=219.3

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+ ++.+++..++++..+.++.++.+|++++++++++++++.
T Consensus         1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   80 (258)
T 3afn_B            1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFV   80 (258)
T ss_dssp             -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHH
Confidence            3456889999999999999999999999999999999999 888888888888778889999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----C---CeEEEEcCcCccC-CCCC
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----G---SSVVFISSIAGYQ-PPSA  156 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~---~~iv~vss~~~~~-~~~~  156 (255)
                      ++++++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|++    .   ++||++||..+.. +.++
T Consensus        81 ~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~  160 (258)
T 3afn_B           81 AKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPG  160 (258)
T ss_dssp             HHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTT
T ss_pred             HHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCC
Confidence            999999999999997333667888999999999999999999999999998842    2   7999999998887 7888


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ...|++||++++.++++++.|+++ +|++++|.||+++|++....  .+..........|.+++.+|+|+|+.+.+++++
T Consensus       161 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  238 (258)
T 3afn_B          161 AGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK--TQDVRDRISNGIPMGRFGTAEEMAPAFLFFASH  238 (258)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC--CHHHHHHHHTTCTTCSCBCGGGTHHHHHHHHCH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc--CHHHHHHHhccCCCCcCCCHHHHHHHHHHHhCc
Confidence            999999999999999999999988 99999999999999987643  344445555667888999999999999999987


Q ss_pred             CCC-CccccEEeeCCCccC
Q 025259          236 DAS-YITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~-~~~G~~i~~dgG~~~  253 (255)
                      ... +++|+++.+|||...
T Consensus       239 ~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          239 LASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHHTTCCSEEEEESTTSSC
T ss_pred             chhccccCCEEeECCCccC
Confidence            666 899999999999753

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-45  Score=307.79  Aligned_cols=240  Identities=24%  Similarity=0.300  Sum_probs=200.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.+.+. .+.++.||++|+++++++++++.++
T Consensus        29 ~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~  108 (281)
T 4dry_A           29 GSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAE  108 (281)
T ss_dssp             -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            357899999999999999999999999999999999999999998888876543 4589999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCccCCCCCChhhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      +|++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|++    .++||++||..+..+.++...|++
T Consensus       109 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~a  188 (281)
T 4dry_A          109 FARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTA  188 (281)
T ss_dssp             HSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHH
Confidence            9999999999998754578899999999999999999999999999999853    479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC-CCc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA-SYI  240 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~-~~~  240 (255)
                      ||+|+++|+++++.|+++ +||||+|+||+++|++........   .......+.+++.+|+|+|++++||++... ..+
T Consensus       189 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~---~~~~~~~~~~~~~~pedvA~~v~fL~s~~~~~~i  265 (281)
T 4dry_A          189 TKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV---LQANGEVAAEPTIPIEHIAEAVVYMASLPLSANV  265 (281)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE---ECTTSCEEECCCBCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh---hhhhhcccccCCCCHHHHHHHHHHHhCCCccCcc
Confidence            999999999999999998 999999999999999876543211   011223456778999999999999999654 456


Q ss_pred             cccEEeeCCC
Q 025259          241 TGETLVVAGG  250 (255)
Q Consensus       241 ~G~~i~~dgG  250 (255)
                      ++..|.....
T Consensus       266 ~~~~i~p~~~  275 (281)
T 4dry_A          266 LTMTVMATRM  275 (281)
T ss_dssp             EEEEEEETTS
T ss_pred             ccEEEEeccc
Confidence            6666655543

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-44  Score=295.27  Aligned_cols=225  Identities=18%  Similarity=0.169  Sum_probs=192.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.   .++.++.+|++|+++++++++++.+.+|++
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   78 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG---NAVIGIVADLAHHEDVDVAFAAAVEWGGLP   78 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG---GGEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            47899999999999999999999999999999999999888877773   358999999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      |+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|++ +++||++||..+..+.++...|++||+|+++
T Consensus        79 d~lvnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  157 (235)
T 3l6e_A           79 ELVLHCAGTGE-FGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRG  157 (235)
T ss_dssp             SEEEEECCCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHH
T ss_pred             cEEEECCCCCC-CCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHH
Confidence            99999999865 678889999999999999999999999999999964 4599999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC-CCCCCccccEEee
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS-DDASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~~  247 (255)
                      |+++++.|+++ |||||+|+||+++|++......           .+..++.+|+|+|+.++|+++ +...+++|-.+..
T Consensus       158 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-----------~~~~~~~~pedvA~~v~~l~~~~~~~~i~~i~~~~  226 (235)
T 3l6e_A          158 FLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-----------VDPSGFMTPEDAAAYMLDALEARSSCHVTDLFIGR  226 (235)
T ss_dssp             HHHHHHHHTTTSSEEEEEEEEEEECCCC----------------------CBCHHHHHHHHHHHTCCCSSEEEEEEEEEE
T ss_pred             HHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-----------CCCcCCCCHHHHHHHHHHHHhCCCCcceeeEEEec
Confidence            99999999998 9999999999999998654321           133478999999999999998 5677888877765


Q ss_pred             CCC
Q 025259          248 AGG  250 (255)
Q Consensus       248 dgG  250 (255)
                      ...
T Consensus       227 ~~~  229 (235)
T 3l6e_A          227 NEG  229 (235)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            543

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=3.2e-45  Score=301.02  Aligned_cols=230  Identities=26%  Similarity=0.339  Sum_probs=201.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-e--CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVIS-S--RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|++|||||++|||++++++|+++|++|+++ +  |+++.+++..+++  .+       +|+.|+++++++++++.+.+|
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~--~~-------~~~~~~~~v~~~~~~~~~~~g   71 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN--PG-------TIALAEQKPERLVDATLQHGE   71 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS--TT-------EEECCCCCGGGHHHHHGGGSS
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh--CC-------CcccCHHHHHHHHHHHHHHcC
Confidence            5899999999999999999999999999999 6  9988887776665  22       233488888999999999999


Q ss_pred             CCcEEEECCCCCCCC---CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           89 RIDVFVLNAAVNPYA---ADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|+||||||... .   .++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++|
T Consensus        72 ~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~as  150 (244)
T 1zmo_A           72 AIDTIVSNDYIPR-PMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPA  150 (244)
T ss_dssp             CEEEEEECCCCCT-TGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHH
T ss_pred             CCCEEEECCCcCC-CCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHH
Confidence            9999999999875 5   7888999999999999999999999999999995  35799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhh---hhhcCCHHHHHHhhc-cCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA---QALLGNDAVRKALEG-KTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++++|+++++.|+++ +|+||+|+||+++|++.   ...... +....... ..|.+++.+|+|+|+.++||+++...
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~p~~r~~~pe~vA~~v~~l~s~~~~  229 (244)
T 1zmo_A          151 RAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENN-PELRERVDRDVPLGRLGRPDEMGALITFLASRRAA  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHC-HHHHHHHHHHCTTCSCBCHHHHHHHHHHHHTTTTG
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccch-HHHHHHHhcCCCCCCCcCHHHHHHHHHHHcCcccc
Confidence            99999999999999998 99999999999999987   543212 22233333 56888999999999999999999999


Q ss_pred             CccccEEeeCCCcc
Q 025259          239 YITGETLVVAGGMA  252 (255)
Q Consensus       239 ~~~G~~i~~dgG~~  252 (255)
                      ++||+.|.+|||.+
T Consensus       230 ~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          230 PIVGQFFAFTGGYL  243 (244)
T ss_dssp             GGTTCEEEESTTCC
T ss_pred             CccCCEEEeCCCCC
Confidence            99999999999964

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.7e-44  Score=296.31  Aligned_cols=239  Identities=29%  Similarity=0.398  Sum_probs=208.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |++++++|++|||||++|||++++++|+++|++|++++|+++.+++..+++.    ...++.+|++++++++++++    
T Consensus         1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 3d3w_A            1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----
T ss_pred             CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC----CCCEEEEeCCCHHHHHHHHH----
Confidence            4467899999999999999999999999999999999999887776655432    24556999999999888876    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--C-CCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--K-GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~-~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|+  + .++||++||..+..+.++...|++
T Consensus        73 ~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 3d3w_A           73 SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCccCC-CcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHH
Confidence            5688999999999865 66788889999999999999999999999999885  3 579999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||++++.++++++.|+++ +|++++|.||+++|++.......+..........|.+++.+|+|+|+.+++++++...+++
T Consensus       152 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 3d3w_A          152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHHHcCccccCCC
Confidence            999999999999999988 9999999999999998765433333334445567888999999999999999998888999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |++|.+|||.+.
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 3d3w_A          232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999864

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=2.1e-44  Score=299.17  Aligned_cols=239  Identities=24%  Similarity=0.403  Sum_probs=204.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++++++++++++++.+.+
T Consensus         8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (265)
T 2o23_A            8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   84 (265)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHC
Confidence            3678999999999999999999999999999999999998887776665   5678999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcC------CCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--------CCeEEEEcCcCccCC
Q 025259           88 GRIDVFVLNAAVNPYAADLL------KTKESVLDKLWEINVKSSILLMQDAAPHMQK--------GSSVVFISSIAGYQP  153 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--------~~~iv~vss~~~~~~  153 (255)
                      +++|+||||||... ..++.      +.+.++|++.+++|+.+++.+++++.|+|++        .++||++||..+..+
T Consensus        85 g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  163 (265)
T 2o23_A           85 GRVDVAVNCAGIAV-ASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEG  163 (265)
T ss_dssp             SCCCEEEECCCCCC-CCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHC
T ss_pred             CCCCEEEECCccCC-CCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCC
Confidence            99999999999865 33333      3789999999999999999999999999853        368999999999999


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHHH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAF  231 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~  231 (255)
                      .++...|++||++++.|+++++.|+++ +|+|++|+||+++|++.....  +...+......|. +++.+|+|+|+.+++
T Consensus       164 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~  241 (265)
T 2o23_A          164 QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQA  241 (265)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC--HHHHHHHHHcCCCcCCCCCHHHHHHHHHH
Confidence            899999999999999999999999988 999999999999999875431  1222233445566 889999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccCC
Q 025259          232 LASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++  ..+++|++|.+|||.+++
T Consensus       242 l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          242 IIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHH--CTTCCSCEEEESTTCCCC
T ss_pred             Hhh--cCccCceEEEECCCEecC
Confidence            995  468999999999998764

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=2.8e-44  Score=304.02  Aligned_cols=245  Identities=27%  Similarity=0.382  Sum_probs=215.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+. +.++.++.+|++++++++++++++.+.
T Consensus        22 ~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  101 (302)
T 1w6u_A           22 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  101 (302)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence            4688999999999999999999999999999999999999888888888765 678999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+++   +.++||++||..+..+.++...|++|
T Consensus       102 ~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~s  180 (302)
T 1w6u_A          102 AGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA  180 (302)
T ss_dssp             TCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHH
Confidence            999999999999864 66778899999999999999999999999999885   34799999999999998999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccCh-hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      |++++.++++++.++++ +|++++|.||+++|+ +..................|.+++.+|+|+|+++++++++...+++
T Consensus       181 K~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dva~~~~~l~~~~~~~~~  260 (302)
T 1w6u_A          181 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN  260 (302)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHHHHHHHHHcCCcccccC
Confidence            99999999999999988 999999999999998 4433322222223455567888999999999999999998888999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+++.+|||...
T Consensus       261 G~~~~v~gg~~~  272 (302)
T 1w6u_A          261 GAVIKFDGGEEV  272 (302)
T ss_dssp             SCEEEESTTHHH
T ss_pred             CCEEEECCCeee
Confidence            999999999753

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.4e-44  Score=293.99  Aligned_cols=231  Identities=23%  Similarity=0.264  Sum_probs=208.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHH-HcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLK-ALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++. ..+.++.++.||++|+++++++++++.+.+|+
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999999999999999999888886 45788999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      +|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+ ..+++|+++|..+..+.++...|++||++++
T Consensus        81 id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~  159 (235)
T 3l77_A           81 VDVVVANAGLGY-FKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAAR  159 (235)
T ss_dssp             CSEEEECCCCCC-CCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHH
T ss_pred             CCEEEECCcccc-ccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHH
Confidence            999999999875 77889999999999999999999999999999985 4679999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +|++++..+ .++||||+|+||+++|++........          ...++.+|+|+|+.+.||+++...+++|+++..|
T Consensus       160 ~~~~~l~~~-~~~i~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~p~dva~~v~~l~~~~~~~~~~~~~~~~  228 (235)
T 3l77_A          160 ALVRTFQIE-NPDVRFFELRPGAVDTYFGGSKPGKP----------KEKGYLKPDEIAEAVRCLLKLPKDVRVEELMLRS  228 (235)
T ss_dssp             HHHHHHHHH-CTTSEEEEEEECSBSSSTTTCCSCCC----------GGGTCBCHHHHHHHHHHHHTSCTTCCCCEEEECC
T ss_pred             HHHHHHhhc-CCCeEEEEEeCCccccccccccCCcc----------cccCCCCHHHHHHHHHHHHcCCCCCccceEEEee
Confidence            999999555 33899999999999999976543321          1236789999999999999999999999999999


Q ss_pred             CCccC
Q 025259          249 GGMAS  253 (255)
Q Consensus       249 gG~~~  253 (255)
                      +|...
T Consensus       229 ~~~~~  233 (235)
T 3l77_A          229 VYQRP  233 (235)
T ss_dssp             TTSCC
T ss_pred             cccCC
Confidence            99753

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=4.7e-44  Score=298.35  Aligned_cols=244  Identities=29%  Similarity=0.513  Sum_probs=218.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++++|++|||||++|||++++++|+++|++|++++| +.+.+++..+++++.+.++.++.+|++|+++++++++++.+.
T Consensus        17 ~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   96 (274)
T 1ja9_A           17 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   96 (274)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999 777888888888877888999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~y~~sKa  165 (255)
                      ++++|++|||||... ..++.+.+.++|++.+++|+.+++.+++++.++|+++++||++||..+. .+.++...|+++|+
T Consensus        97 ~~~~d~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~  175 (274)
T 1ja9_A           97 FGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA  175 (274)
T ss_dssp             HSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCCEEEECCCCCC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHH
Confidence            999999999999875 6677889999999999999999999999999998755899999999998 78888999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhh-----------cCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQAL-----------LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      +++.++++++.|+++ +|++++|.||+++|++....           ...++.........+.+++.+|+|+|+++.+++
T Consensus       176 a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~l~  255 (274)
T 1ja9_A          176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  255 (274)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCCCccCHHHHHHHHHHHh
Confidence            999999999999988 99999999999999987631           111344445556678888999999999999999


Q ss_pred             CCCCCCccccEEeeCCCcc
Q 025259          234 SDDASYITGETLVVAGGMA  252 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++...+++|+++++|||..
T Consensus       256 ~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          256 QEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CcccccccCcEEEecCCcC
Confidence            9888889999999999963

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.4e-44  Score=298.97  Aligned_cols=232  Identities=26%  Similarity=0.366  Sum_probs=204.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+.+.++...+ ++..+.++..+     |+++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999999999999988877665 66655555443     777888999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      ||||||......++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||+++++|
T Consensus        76 lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~  155 (254)
T 1zmt_A           76 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  155 (254)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHH
Confidence            999999862367788999999999999999999999999999985  458999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcc---------cChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFV---------PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +++++.|+++ +|+||+|+||++         +|++...   .++.........|.+++.+|+|+|+.++||+++...++
T Consensus       156 ~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~---~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~  232 (254)
T 1zmt_A          156 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT---NPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYL  232 (254)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT---CHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGG
T ss_pred             HHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc---ChHHHHHHhccCCCCCCcCHHHHHHHHHHHhCcccCCc
Confidence            9999999998 999999999999         8887643   22333444555788899999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|++|.+|||...
T Consensus       233 tG~~~~vdgG~~~  245 (254)
T 1zmt_A          233 TGQVFWLAGGFPM  245 (254)
T ss_dssp             TTCEEEESTTCCC
T ss_pred             cCCEEEECCCchh
Confidence            9999999999864

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.1e-44  Score=308.61  Aligned_cols=248  Identities=24%  Similarity=0.257  Sum_probs=200.7

Q ss_pred             ccccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhH------HHH-HHHHHHHc--CCe---EEEEEec--
Q 025259            6 MAKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKN------VDK-AVEKLKAL--GIE---VIGIICH--   69 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~------~~~-~~~~~~~~--~~~---~~~~~~D--   69 (255)
                      |.+++++|++|||||  ++|||++++++|+++|++|++++|++..      .+. ..+++++.  +..   ..++.+|  
T Consensus         3 ~~~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~   82 (315)
T 2o2s_A            3 FPIDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAA   82 (315)
T ss_dssp             -CCCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTT
T ss_pred             CcccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            445689999999999  8999999999999999999999986421      000 01111111  110   1233333  


Q ss_pred             ----------CC--------CHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Q 025259           70 ----------VS--------NEQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQ  130 (255)
Q Consensus        70 ----------~~--------~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                                ++        |+++++++++++.+.+|++|+||||||... ...++.+.+.++|++++++|+.+++.+++
T Consensus        83 ~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~  162 (315)
T 2o2s_A           83 FDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQ  162 (315)
T ss_dssp             CSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHH
Confidence                      33        366899999999999999999999999753 25678889999999999999999999999


Q ss_pred             HHHhcccCCCeEEEEcCcCccCCCCCC-hhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccChhhhhhcCC----
Q 025259          131 DAAPHMQKGSSVVFISSIAGYQPPSAM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAQALLGN----  203 (255)
Q Consensus       131 ~~~~~l~~~~~iv~vss~~~~~~~~~~-~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t~~~~~~~~~----  203 (255)
                      +++|+|+++++||++||..+..+.++. ..|++||+|+++|+++++.|++ + |||||+|+||+++|++.......    
T Consensus       163 ~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~  242 (315)
T 2o2s_A          163 HFGPIMNEGGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKS  242 (315)
T ss_dssp             HHSTTEEEEEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSC
T ss_pred             HHHHHHhcCCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccch
Confidence            999999777899999999999888887 5899999999999999999997 3 99999999999999987654211    


Q ss_pred             --HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          204 --DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       204 --~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                        ....+......|.+++.+|+|+|+.++||+++.+.++||++|.+|||.+.
T Consensus       243 ~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          243 FIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             HHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence              12222334457889999999999999999999999999999999999864

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=2.4e-45  Score=313.14  Aligned_cols=248  Identities=23%  Similarity=0.267  Sum_probs=169.4

Q ss_pred             ccccCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCCh-----------hHHH-----------HHHHHHHHcCC
Q 025259            6 MAKRFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQ-----------KNVD-----------KAVEKLKALGI   61 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~-----------~~~~-----------~~~~~~~~~~~   61 (255)
                      |.+++++|++|||||  ++|||++++++|+++|++|++++|++           +.++           +..+++.+.+.
T Consensus         3 ~~~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (319)
T 2ptg_A            3 LPVDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPV   82 (319)
T ss_dssp             CCCCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC------------------------------
T ss_pred             cccccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccc
Confidence            445688999999999  89999999999999999999998753           2222           22333333221


Q ss_pred             e---EEEEEec------------CCC--------HHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHH
Q 025259           62 E---VIGIICH------------VSN--------EQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKL  117 (255)
Q Consensus        62 ~---~~~~~~D------------~~~--------~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~  117 (255)
                      .   ..++.+|            +++        +++++++++++.+++|++|+||||||... ...++.+.+.++|+++
T Consensus        83 ~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~  162 (319)
T 2ptg_A           83 DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAA  162 (319)
T ss_dssp             --CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHH
T ss_pred             cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHH
Confidence            1   1333333            333        45899999999999999999999999753 2567889999999999


Q ss_pred             HHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCC-hhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccC
Q 025259          118 WEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPT  194 (255)
Q Consensus       118 ~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~-~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t  194 (255)
                      +++|+.+++.++++++|+|+++++||++||..+..+.++. ..|++||+|+++|+++++.|++ + |||||+|+||+++|
T Consensus       163 ~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T  242 (319)
T 2ptg_A          163 VSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKS  242 (319)
T ss_dssp             HHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC-
T ss_pred             HhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccC
Confidence            9999999999999999999767899999999999888887 6899999999999999999997 3 99999999999999


Q ss_pred             hhhhhhcCC--H----HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          195 HFAQALLGN--D----AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       195 ~~~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|.......  +    ...+......|.+++.+|+|+|+.++||+++.+.++||++|.+|||++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          243 RAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             ------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             hhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence            987543211  1    1111223446788999999999999999999999999999999999864

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-43  Score=300.62  Aligned_cols=247  Identities=28%  Similarity=0.410  Sum_probs=216.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-----cCCeEEEEEecCCCHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-----LGIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~   79 (255)
                      .+..++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++.     .+.++.++.+|++++++++++
T Consensus        11 ~~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~   90 (303)
T 1yxm_A           11 LAPGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNL   90 (303)
T ss_dssp             BCTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHH
T ss_pred             cCcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHH
Confidence            344578999999999999999999999999999999999999999888888876     466899999999999999999


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-c-CCCeEEEEcCcCccCCCCCC
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-Q-KGSSVVFISSIAGYQPPSAM  157 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~-~~~~iv~vss~~~~~~~~~~  157 (255)
                      ++++.+.+|++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|.+ + ..++||++||.. ..+.++.
T Consensus        91 ~~~~~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~  168 (303)
T 1yxm_A           91 VKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLA  168 (303)
T ss_dssp             HHHHHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTC
T ss_pred             HHHHHHHcCCCCEEEECCCCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcc
Confidence            9999999999999999999764 5677889999999999999999999999999954 3 357999999998 7788889


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          158 AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ..|+++|+++++++++++.|+.+ +|++++|.||+++|++......  .+...+......|.+++.+|+|+|+.+++|++
T Consensus       169 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~~  248 (303)
T 1yxm_A          169 VHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLS  248 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHS
T ss_pred             hhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHHHHHHHHhC
Confidence            99999999999999999999988 9999999999999995322111  12222333445677889999999999999999


Q ss_pred             CCCCCccccEEeeCCCccC
Q 025259          235 DDASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+++|++|.+|||...
T Consensus       249 ~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          249 PAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             cccccCCCcEEEECCCeec
Confidence            8889999999999999764

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3.6e-43  Score=293.66  Aligned_cols=246  Identities=30%  Similarity=0.485  Sum_probs=212.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.+..++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus        12 ~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   90 (278)
T 2bgk_A           12 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSP-DVISFVHCDVTKDEDVRNLVDTTIAKH   90 (278)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT-TTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCC-CceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            4578999999999999999999999999999999999988777766666322 378999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCC-CChhhHHh
Q 025259           88 GRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPS-AMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~-~~~~y~~s  163 (255)
                      +++|+||||||.... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..++.+.+ +...|+++
T Consensus        91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~s  170 (278)
T 2bgk_A           91 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  170 (278)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHH
Confidence            999999999997642 35678899999999999999999999999999985  357999999999988877 78899999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhc--cCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEG--KTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      |++++.++++++.|+++ +|++++|.||+++|++...... .+........  ..+.+++.+|+|+|+++++++++...+
T Consensus       171 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~  250 (278)
T 2bgk_A          171 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  250 (278)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHHHHHHHHHHcCccccc
Confidence            99999999999999988 9999999999999998765432 2222222222  235678999999999999999988889


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      ++|+++.+|||...+
T Consensus       251 ~~G~~~~v~gg~~~~  265 (278)
T 2bgk_A          251 VSGLNLVIDGGYTRT  265 (278)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCEEEECCccccc
Confidence            999999999998654

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=9.1e-44  Score=296.85  Aligned_cols=239  Identities=18%  Similarity=0.266  Sum_probs=198.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++ |++|||||++|||++++++|+++|++|++++|+.+.+++..+++... .++.++.+|++|+++++++++++.+.+
T Consensus        18 ~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   95 (272)
T 2nwq_A           18 SHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK-TRVLPLTLDVRDRAAMSAAVDNLPEEF   95 (272)
T ss_dssp             ---C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-SCEEEEECCTTCHHHHHHHHHTCCGGG
T ss_pred             CCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            3556 99999999999999999999999999999999999888887777544 578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCC-eEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGS-SVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~-~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||......++.+.+.++|++++++|+.+++.++++++|+|+  ..+ +||++||..+..+.++...|+++|
T Consensus        96 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asK  175 (272)
T 2nwq_A           96 ATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTK  175 (272)
T ss_dssp             SSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHH
Confidence            99999999999864336788999999999999999999999999999985  357 999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+++ |||||+|.||+++|++.........  +............+|+|+|+.++||+++ ..+++|+
T Consensus       176 aa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~~~pedvA~~v~~l~s~-~~~~~g~  252 (272)
T 2nwq_A          176 AFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQ--ARYDKTYAGAHPIQPEDIAETIFWIMNQ-PAHLNIN  252 (272)
T ss_dssp             HHHHHHHHHHHTTCTTSCCEEEEEEECSBC----------------------CCCCBCHHHHHHHHHHHHTS-CTTEEEE
T ss_pred             HHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccch--HHHHHhhccCCCCCHHHHHHHHHHHhCC-CccCccc
Confidence            9999999999999998 9999999999999998653211110  0011111122357999999999999986 5789999


Q ss_pred             EEeeCCCc
Q 025259          244 TLVVAGGM  251 (255)
Q Consensus       244 ~i~~dgG~  251 (255)
                      .|.+|+|.
T Consensus       253 ~i~v~~~~  260 (272)
T 2nwq_A          253 SLEIMPVS  260 (272)
T ss_dssp             EEEEEETT
T ss_pred             eEEEeecc
Confidence            99999884

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-44  Score=297.32  Aligned_cols=240  Identities=25%  Similarity=0.339  Sum_probs=199.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-c
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK-Y   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~   87 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+++.+++..++++..+.++.++.+|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            467999999999999999999999999999999999999998888888877788999999999999999999999886 8


Q ss_pred             CCCcEEEECCCCCC------CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChh
Q 025259           88 GRIDVFVLNAAVNP------YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        88 g~~d~lv~~ag~~~------~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      |++|+||||||...      ...++.+.+.++|++++++|+.+++.+.+++.|+|+  +.++||++||..+..+. +...
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~  160 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVP  160 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCc
Confidence            99999999995311      245677888999999999999999999999999885  35899999999887754 4688


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHH-HH-hh-ccCCCCCCCChHHHHHHHHHhcCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVR-KA-LE-GKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      |++||+++++|+++++.|+++ +|+||+|+||+++|++........... .. .. ...+.++..+|+|+|+.++||+++
T Consensus       161 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~v~~l~s~  240 (260)
T 2qq5_A          161 YGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALATD  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------CHHHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999998 999999999999999865432211110 10 11 123445567999999999999998


Q ss_pred             CC-CCccccEEeeCC
Q 025259          236 DA-SYITGETLVVAG  249 (255)
Q Consensus       236 ~~-~~~~G~~i~~dg  249 (255)
                      .. .++||++|.+|+
T Consensus       241 ~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          241 PNILSLSGKVLPSCD  255 (260)
T ss_dssp             TTGGGGTTCEEEHHH
T ss_pred             cccccccceeechhh
Confidence            76 489999998874

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=3.1e-43  Score=288.81  Aligned_cols=238  Identities=29%  Similarity=0.470  Sum_probs=213.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEE-EEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIG-IICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|++|||||++|||++++++|+++|++|+++ +|+.+.+++..++++..+.++.. +.+|++++++++++++++.+.+++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            4799999999999999999999999999988 89998888888888777767776 999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|++|||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.++...|+++|+++
T Consensus        81 ~d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (245)
T 2ph3_A           81 LDTLVNNAGITR-DTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGL  159 (245)
T ss_dssp             CCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHH
T ss_pred             CCEEEECCCCCC-CCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHH
Confidence            999999999875 66788899999999999999999999999999985  457999999999888888999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.++++++.|+.+ +|++++|.||+++|++....  .+..........|.+++.+|+|+|+.+.+++++...+++|+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~  237 (245)
T 2ph3_A          160 IGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL--PQEVKEAYLKQIPAGRFGRPEEVAEAVAFLVSEKAGYITGQTLC  237 (245)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCcccccccCCEEE
Confidence            9999999999988 99999999999999987653  23344445555677889999999999999999888899999999


Q ss_pred             eCCCcc
Q 025259          247 VAGGMA  252 (255)
Q Consensus       247 ~dgG~~  252 (255)
                      +|||..
T Consensus       238 v~gg~~  243 (245)
T 2ph3_A          238 VDGGLT  243 (245)
T ss_dssp             ESTTCS
T ss_pred             ECCCCC
Confidence            999964

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-43  Score=288.40  Aligned_cols=239  Identities=25%  Similarity=0.367  Sum_probs=208.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++    ....++.+|++++++++++++    
T Consensus         1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~----   72 (244)
T 1cyd_A            1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----   72 (244)
T ss_dssp             --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----
T ss_pred             CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----cCCCcEEecCCCHHHHHHHHH----
Confidence            345788999999999999999999999999999999999988776655432    234556999999999888877    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--C-CCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--K-GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~-~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|.|+  + .++||++||..++.+.++...|++
T Consensus        73 ~~~~id~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~  151 (244)
T 1cyd_A           73 GIGPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSS  151 (244)
T ss_dssp             TCCCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HcCCCCEEEECCcccC-CCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHH
Confidence            5678999999999875 66788899999999999999999999999999885  3 579999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||++++.++++++.|+++ +|++++|.||+++|++.......+..........|.+++..|+|+|+++++++++...+++
T Consensus       152 sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~~~~~  231 (244)
T 1cyd_A          152 TKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTS  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHHHhCchhhccc
Confidence            999999999999999988 9999999999999998765444455545555667788999999999999999998888999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      |+.+.+|||...
T Consensus       232 G~~~~v~gG~~~  243 (244)
T 1cyd_A          232 GGGILVDAGYLA  243 (244)
T ss_dssp             SSEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999864

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=1.4e-44  Score=305.44  Aligned_cols=247  Identities=23%  Similarity=0.245  Sum_probs=200.7

Q ss_pred             ccccCCCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhH-----------HHHHHHHHHHcC--CeEEEEEec-
Q 025259            6 MAKRFQGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKN-----------VDKAVEKLKALG--IEVIGIICH-   69 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~-----------~~~~~~~~~~~~--~~~~~~~~D-   69 (255)
                      |.+++++|++|||||+  +|||++++++|+++|++|++++|++..           +++. +++...+  .....+.+| 
T Consensus         2 ~~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~   80 (297)
T 1d7o_A            2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS-RVLPDGSLMEIKKVYPLDA   80 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGG-GBCTTSSBCCEEEEEEECT
T ss_pred             CccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhh-hhhccccccccccccccce
Confidence            3456889999999999  999999999999999999999876321           1111 1111100  112334443 


Q ss_pred             -------CC----C--------HHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHH
Q 025259           70 -------VS----N--------EQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLM  129 (255)
Q Consensus        70 -------~~----~--------~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~  129 (255)
                             ++    +        +++++++++++.+++|++|+||||||... ...++.+.+.++|++++++|+.+++.++
T Consensus        81 ~~~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~  160 (297)
T 1d7o_A           81 VFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLL  160 (297)
T ss_dssp             TCCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred             eccchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHH
Confidence                   33    2        66899999999999999999999999642 2467788999999999999999999999


Q ss_pred             HHHHhcccCCCeEEEEcCcCccCCCCCC-hhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccChhhhhhcCCHHH
Q 025259          130 QDAAPHMQKGSSVVFISSIAGYQPPSAM-AMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAQALLGNDAV  206 (255)
Q Consensus       130 ~~~~~~l~~~~~iv~vss~~~~~~~~~~-~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t~~~~~~~~~~~~  206 (255)
                      ++++|+|+++++||++||..+..+.++. ..|++||+++++|+++++.|++ + |||||+|+||+++|++.......+..
T Consensus       161 ~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~  240 (297)
T 1d7o_A          161 SHFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTM  240 (297)
T ss_dssp             HHHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHH
T ss_pred             HHHHHHhccCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccHHH
Confidence            9999999767899999999999888887 6999999999999999999997 3 99999999999999986542111233


Q ss_pred             HHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          207 RKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+......|.+++.+|+|+|+.++||+++...+++|++|.+|||++.
T Consensus       241 ~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          241 IEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            34444557888999999999999999999899999999999999864

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=1.2e-43  Score=315.17  Aligned_cols=240  Identities=28%  Similarity=0.382  Sum_probs=204.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+++|++|||||++|||++++++|+++|++|++++|+... ++..+..++.+  +.++.||++|+++++++++++.+.+
T Consensus       209 ~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~~~--~~~~~~Dvtd~~~v~~~~~~~~~~~  285 (454)
T 3u0b_A          209 KPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADKVG--GTALTLDVTADDAVDKITAHVTEHH  285 (454)
T ss_dssp             STTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHHHT--CEEEECCTTSTTHHHHHHHHHHHHS
T ss_pred             cCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHHcC--CeEEEEecCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999999999997532 23333333333  4578999999999999999999999


Q ss_pred             CC-CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GR-IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~-~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++ +|+||||||+.. ..++.+.+.++|++++++|+.+++++.+++.|.|+  +.++||++||..+..+.+++..|++||
T Consensus       286 g~~id~lV~nAGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasK  364 (454)
T 3u0b_A          286 GGKVDILVNNAGITR-DKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTK  364 (454)
T ss_dssp             TTCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCceEEEECCcccC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHH
Confidence            86 999999999876 77889999999999999999999999999999885  567999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +++++|+++++.|+.+ ||+||+|+||+++|+|.......  ..+......+.++..+|+|+|+.+.||+++.+.++||+
T Consensus       365 aal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--~~~~~~~~~~l~r~g~pedvA~~v~fL~s~~a~~itG~  442 (454)
T 3u0b_A          365 AGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLA--TREVGRRLNSLFQGGQPVDVAELIAYFASPASNAVTGN  442 (454)
T ss_dssp             HHHHHHHHHHHHHHHTTTCEEEEEEECSBCC------------CHHHHHSBTTSSCBCHHHHHHHHHHHHCGGGTTCCSC
T ss_pred             HHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchh--hHHHHHhhccccCCCCHHHHHHHHHHHhCCccCCCCCc
Confidence            9999999999999988 99999999999999997654221  12233445678889999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||..+
T Consensus       443 ~i~vdGG~~l  452 (454)
T 3u0b_A          443 TIRVCGQAML  452 (454)
T ss_dssp             EEEESSSBSC
T ss_pred             EEEECCcccc
Confidence            9999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=2.9e-43  Score=290.05  Aligned_cols=232  Identities=20%  Similarity=0.271  Sum_probs=193.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++.+.+|++|+
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~   77 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL---GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDI   77 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---cCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            68999999999999999999999999999999998887776665   346889999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      ||||||......++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.++...|++||+++++|
T Consensus        78 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  157 (248)
T 3asu_A           78 LVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQF  157 (248)
T ss_dssp             EEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHH
Confidence            999999863356788899999999999999999999999999984  458999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCccc-ChhhhhhcC-CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVP-THFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~-t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +++++.|+++ +||||+|+||+++ |++...... ......   .........+|+|+|+.++||+++ ..+++|+.+.+
T Consensus       158 ~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~---~~~~~~~~~~p~dvA~~v~~l~s~-~~~~~g~~i~v  233 (248)
T 3asu_A          158 SLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE---KTYQNTVALTPEDVSEAVWWVSTL-PAHVNINTLEM  233 (248)
T ss_dssp             HHHHHHHTTTSCCEEEEEEECSBCC-------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCEEEE
T ss_pred             HHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHH---HHHhccCCCCHHHHHHHHHHHhcC-CccceeeEEEE
Confidence            9999999998 9999999999999 998643211 111111   111112346999999999999986 57899999999


Q ss_pred             CCCc
Q 025259          248 AGGM  251 (255)
Q Consensus       248 dgG~  251 (255)
                      +++.
T Consensus       234 ~~~~  237 (248)
T 3asu_A          234 MPVT  237 (248)
T ss_dssp             CCTT
T ss_pred             cccc
Confidence            9874

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=4.5e-43  Score=296.76  Aligned_cols=230  Identities=26%  Similarity=0.395  Sum_probs=199.2

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+.++.++.||++|+++++++++++.+
T Consensus        25 ~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  104 (301)
T 3tjr_A           25 FLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFR  104 (301)
T ss_dssp             CCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             HHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            45569999999999999999999999999999999999999999999999988888999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      .+|++|+||||||... ..++.+.+.++|++++++|+.|++.++++++|+|++   .++||++||..+..+.++...|++
T Consensus       105 ~~g~id~lvnnAg~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  183 (301)
T 3tjr_A          105 LLGGVDVVFSNAGIVV-AGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGV  183 (301)
T ss_dssp             HHSSCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             hCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHH
Confidence            9999999999999875 678889999999999999999999999999999853   579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH--------HHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND--------AVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ||+++++|+++++.|+++ ||+|++|+||+++|++........        ................+|+|+|+.++..+
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i~~~l  263 (301)
T 3tjr_A          184 AKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLTADAI  263 (301)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHHHHHH
Confidence            999999999999999998 999999999999999876431100        00111111222345789999999999988


Q ss_pred             CCC
Q 025259          234 SDD  236 (255)
Q Consensus       234 s~~  236 (255)
                      ...
T Consensus       264 ~~~  266 (301)
T 3tjr_A          264 LAN  266 (301)
T ss_dssp             HHT
T ss_pred             hcC
Confidence            654

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=5e-43  Score=288.82  Aligned_cols=232  Identities=30%  Similarity=0.467  Sum_probs=197.2

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .+....+++|++|||||++|||++++++|+++|++|++++|+++.+++       .+ +..++ +|+  +++++++++++
T Consensus        11 ~~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~~-~~~~~-~D~--~~~~~~~~~~~   79 (249)
T 1o5i_A           11 HHMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SG-HRYVV-CDL--RKDLDLLFEKV   79 (249)
T ss_dssp             -----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TC-SEEEE-CCT--TTCHHHHHHHS
T ss_pred             hhHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-------hC-CeEEE-eeH--HHHHHHHHHHh
Confidence            345567899999999999999999999999999999999998743322       23 56677 999  55666666654


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                          .++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  +.++||++||..+..+.++...|+
T Consensus        80 ----~~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (249)
T 1o5i_A           80 ----KEVDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSN  154 (249)
T ss_dssp             ----CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHH
T ss_pred             ----cCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHH
Confidence                37999999999865 66788999999999999999999999999999985  347999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHH-HhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRK-ALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +||++++.|+++++.|+++ +|+||+|+||+++|++.....  +.... ......|.+++.+|+|+|+.++||+++...+
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l~s~~~~~  232 (249)
T 1o5i_A          155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL--SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASY  232 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS--CHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc--hhhHHHHHHhcCCCCCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999999998 999999999999999876542  22233 4555678889999999999999999998899


Q ss_pred             ccccEEeeCCCccC
Q 025259          240 ITGETLVVAGGMAS  253 (255)
Q Consensus       240 ~~G~~i~~dgG~~~  253 (255)
                      ++|+++.+|||.+.
T Consensus       233 ~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          233 LTGQTIVVDGGLSK  246 (249)
T ss_dssp             CCSCEEEESTTCCC
T ss_pred             CCCCEEEECCCccc
Confidence            99999999999864

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=5.5e-44  Score=293.11  Aligned_cols=223  Identities=13%  Similarity=0.119  Sum_probs=197.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (255)
                      ..++|++|||||++|||++++++|+++|++|++++|+++..+          ....++.+|++|+++++++++++.+.+ 
T Consensus         4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~v~~~~~~~~~~~~   73 (241)
T 1dhr_A            4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA----------SASVIVKMTDSFTEQADQVTAEVGKLLG   73 (241)
T ss_dssp             --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS----------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred             cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc----------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            356899999999999999999999999999999999876532          246778999999999999999999999 


Q ss_pred             -CCCcEEEECCCCCCCCCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 -GRIDVFVLNAAVNPYAADL-LKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                       +++|+||||||... ..++ .+.+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+.++...|++||+
T Consensus        74 ~g~iD~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  152 (241)
T 1dhr_A           74 DQKVDAILCVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKG  152 (241)
T ss_dssp             TCCEEEEEECCCCCC-CBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             CCCCCEEEEcccccC-CCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHH
Confidence             79999999999865 5566 78889999999999999999999999999977789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      ++++|+++++.|++  + +||||+|+||+++|++........          ...+..+|+|+|+.+++++++...+++|
T Consensus       153 a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~~~vA~~v~~l~~~~~~~~~G  222 (241)
T 1dhr_A          153 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSG  222 (241)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTT
T ss_pred             HHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcch----------hhccCCCHHHHHHHHHHHhcCCCcCccc
Confidence            99999999999998  7 999999999999999876432211          1234567999999999999999999999


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +.+.+|||..
T Consensus       223 ~~~~v~g~~~  232 (241)
T 1dhr_A          223 SLIQVVTTDG  232 (241)
T ss_dssp             CEEEEEEETT
T ss_pred             eEEEEeCCCC
Confidence            9999999865

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=3.4e-43  Score=321.97  Aligned_cols=229  Identities=24%  Similarity=0.344  Sum_probs=201.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh---------hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ---------KNVDKAVEKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      +++++|++|||||++|||++++++|+++|++|++++|+.         +.++++.+++...+.+.   .+|++|.+++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~---~~d~~d~~~~~~   80 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVA---VADYNNVLDGDK   80 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEE---EEECCCTTCHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeE---EEEcCCHHHHHH
Confidence            467899999999999999999999999999999998765         67778888887776654   368888888999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSA  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~  156 (255)
                      +++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++|+++|+|+  +.|+||++||..+..+.++
T Consensus        81 ~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~  159 (604)
T 2et6_A           81 IVETAVKNFGTVHVIINNAGILR-DASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFG  159 (604)
T ss_dssp             HHHHHHHHHSCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCC
Confidence            99999999999999999999875 67889999999999999999999999999999995  4589999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ...|++||+|+.+|+++++.|+++ |||||+|+|| ++|+|.....+ ++.          ....+|+|+|..+.||+++
T Consensus       160 ~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~~-~~~----------~~~~~pe~vA~~v~~L~s~  227 (604)
T 2et6_A          160 QANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIMP-PPM----------LEKLGPEKVAPLVLYLSSA  227 (604)
T ss_dssp             BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTSC-HHH----------HTTCSHHHHHHHHHHHTSS
T ss_pred             chHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccCC-hhh----------hccCCHHHHHHHHHHHhCC
Confidence            999999999999999999999998 9999999998 69998754322 111          1235999999999999999


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      . .++||++|.+|||...
T Consensus       228 ~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          228 E-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             S-CCCCSCEEEEETTEEE
T ss_pred             c-ccCCCCEEEECCCeEE
Confidence            8 9999999999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=3.8e-42  Score=282.34  Aligned_cols=231  Identities=22%  Similarity=0.271  Sum_probs=210.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++|++|||||++|||++++++|+++|+       +|++++|+.+.+++..+++...+.++.++.+|++++++++++++++
T Consensus         1 ~~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (244)
T 2bd0_A            1 MKHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI   80 (244)
T ss_dssp             -CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence            368999999999999999999999999       9999999999888888888777788999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhH
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      .+.++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++++.|+|+  +.++||++||..+..+.++...|+
T Consensus        81 ~~~~g~id~li~~Ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (244)
T 2bd0_A           81 VERYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYC  159 (244)
T ss_dssp             HHHTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCCEEEEcCCcCC-cCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhH
Confidence            999999999999999875 66788899999999999999999999999999984  457999999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||++++.|+++++.|+.+ +|++++|.||+++|++........           ..++.+|+|+|+.+++++++...++
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~-----------~~~~~~~~dva~~~~~l~~~~~~~~  228 (244)
T 2bd0_A          160 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDEM-----------QALMMMPEDIAAPVVQAYLQPSRTV  228 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCSTT-----------GGGSBCHHHHHHHHHHHHTSCTTEE
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccccc-----------cccCCCHHHHHHHHHHHHhCCcccc
Confidence            9999999999999999988 999999999999999875432110           1257899999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      +|+++..+||...
T Consensus       229 ~g~~~~~~~~~~~  241 (244)
T 2bd0_A          229 VEEIILRPTSGDI  241 (244)
T ss_dssp             EEEEEEEETTCCC
T ss_pred             chheEEecccccc
Confidence            9999999998653

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=6.2e-43  Score=320.25  Aligned_cols=228  Identities=27%  Similarity=0.399  Sum_probs=197.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++|++|||||++|||++++++|+++|++|+++++..  +++..+++.+.+.++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAAGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHTTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhcCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            478999999999999999999999999999999998742  45666777777778888888884  45678899999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.|++.++|+++|+|+  +.|+||++||..+..+.++...|++||+
T Consensus       394 G~iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKa  472 (604)
T 2et6_A          394 GTIDILVNNAGILR-DRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKA  472 (604)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHH
Confidence            99999999999875 67889999999999999999999999999999995  4589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+++++.|+++ |||||+|+||+ +|+|.......           ......+|+|||+.+.||+++.+. +||++
T Consensus       473 al~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~~-----------~~~~~~~pe~vA~~v~~L~s~~~~-itG~~  539 (604)
T 2et6_A          473 GILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMRE-----------QDKNLYHADQVAPLLVYLGTDDVP-VTGET  539 (604)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC--------------------CCSSCGGGTHHHHHHTTSTTCC-CCSCE
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCch-----------hhccCCCHHHHHHHHHHHhCCccC-CCCcE
Confidence            999999999999998 99999999996 99986543211           012356999999999999999888 99999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||...
T Consensus       540 ~~vdGG~~~  548 (604)
T 2et6_A          540 FEIGGGWIG  548 (604)
T ss_dssp             EEEETTEEE
T ss_pred             EEECCCeeE
Confidence            999999753

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=6.7e-42  Score=286.50  Aligned_cols=240  Identities=25%  Similarity=0.388  Sum_probs=205.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++++..+  .++.++.+|++++++++++++++.+
T Consensus        28 ~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  107 (279)
T 1xg5_A           28 ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS  107 (279)
T ss_dssp             GGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence            56899999999999999999999999999999999999999888888887764  5788999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC----CCeEEEEcCcCcc--CCCCCChh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGY--QPPSAMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~----~~~iv~vss~~~~--~~~~~~~~  159 (255)
                      .++++|+||||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++    .++||++||..+.  .+.++...
T Consensus       108 ~~g~iD~vi~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~  186 (279)
T 1xg5_A          108 QHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHF  186 (279)
T ss_dssp             HHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHH
T ss_pred             hCCCCCEEEECCCCCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCch
Confidence            9999999999999865 667888999999999999999999999999999852    2799999999987  56777889


Q ss_pred             hHHhHHHHHHHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          160 YGVTKTALLGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |+++|++++.|+++++.|+.  + +||+++|.||+++|++.........  +......+..++.+|+|+|+.++++++..
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~dvA~~i~~l~~~~  264 (279)
T 1xg5_A          187 YSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDP--EKAAATYEQMKCLKPEDVAEAVIYVLSTP  264 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCH--HHHHHHHC---CBCHHHHHHHHHHHHHSC
T ss_pred             hHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccCh--hHHhhhcccccCCCHHHHHHHHHHHhcCC
Confidence            99999999999999999997  6 9999999999999998644322211  11112224456889999999999999988


Q ss_pred             CCCccccEEeeCCC
Q 025259          237 ASYITGETLVVAGG  250 (255)
Q Consensus       237 ~~~~~G~~i~~dgG  250 (255)
                      ..+.+|++..-++|
T Consensus       265 ~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          265 AHIQIGDIQMRPTG  278 (279)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             cceEeeeEEEccCC
Confidence            88888876655554

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=3.7e-43  Score=287.30  Aligned_cols=221  Identities=16%  Similarity=0.180  Sum_probs=195.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+++..+          ....++.+|++++++++++++++.+.+  +
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g   71 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA----------DSNILVDGNKNWTEQEQSILEQTASSLQGS   71 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS----------SEEEECCTTSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc----------cccEEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            5899999999999999999999999999999999976532          245778999999999999999999998  7


Q ss_pred             CCcEEEECCCCCCCCCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADL-LKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      ++|+||||||... ..++ .+.+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+.++...|++||+++
T Consensus        72 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  150 (236)
T 1ooe_A           72 QVDGVFCVAGGWA-GGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAV  150 (236)
T ss_dssp             CEEEEEECCCCCC-CBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHH
T ss_pred             CCCEEEECCcccC-CCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHH
Confidence            9999999999865 5566 7788999999999999999999999999997778999999999999999999999999999


Q ss_pred             HHHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHH-HhcCCCCCCcccc
Q 025259          168 LGLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA-FLASDDASYITGE  243 (255)
Q Consensus       168 ~~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~s~~~~~~~G~  243 (255)
                      ++|+++++.|++  + +|+||+|+||+++|++.......          ....+..+|+|+|+.++ +|+++...+++|+
T Consensus       151 ~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~----------~~~~~~~~~~dvA~~i~~~l~s~~~~~~~G~  220 (236)
T 1ooe_A          151 HHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPN----------ADHSSWTPLSFISEHLLKWTTETSSRPSSGA  220 (236)
T ss_dssp             HHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTT----------CCGGGCBCHHHHHHHHHHHHHCGGGCCCTTC
T ss_pred             HHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCCC----------ccccccCCHHHHHHHHHHHHcCCCccccccc
Confidence            999999999997  7 99999999999999987643221          11234678999999998 5558888999999


Q ss_pred             EEeeCCCcc
Q 025259          244 TLVVAGGMA  252 (255)
Q Consensus       244 ~i~~dgG~~  252 (255)
                      .+.+|||..
T Consensus       221 ~~~v~gg~~  229 (236)
T 1ooe_A          221 LLKITTENG  229 (236)
T ss_dssp             EEEEEEETT
T ss_pred             EEEEecCCC
Confidence            999999975

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=6.4e-43  Score=288.53  Aligned_cols=222  Identities=17%  Similarity=0.166  Sum_probs=197.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +..+|++|||||++|||++++++|+++|++|++++|+.+..+.            ..+.+|++|+++++++++++.++++
T Consensus        19 ~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------------~~~~~d~~d~~~v~~~~~~~~~~~g   86 (251)
T 3orf_A           19 SHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------------HSFTIKDSGEEEIKSVIEKINSKSI   86 (251)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------------EEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred             cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------------cceEEEeCCHHHHHHHHHHHHHHcC
Confidence            4458999999999999999999999999999999999865321            3578999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|++.++||++||..+..+.++...|++||++++
T Consensus        87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~  166 (251)
T 3orf_A           87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATH  166 (251)
T ss_dssp             CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHH
Confidence            99999999998763444778889999999999999999999999999987789999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC-CCCCccccE
Q 025259          169 GLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD-DASYITGET  244 (255)
Q Consensus       169 ~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~-~~~~~~G~~  244 (255)
                      .|+++++.|++  + +|+|++|.||+++|++.......          .+.+++.+|+|+|+.+++|+++ ...+++|++
T Consensus       167 ~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~~~----------~~~~~~~~~~dva~~i~~l~~~~~~~~~tG~~  236 (251)
T 3orf_A          167 HIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSD----------ANFDDWTPLSEVAEKLFEWSTNSDSRPTNGSL  236 (251)
T ss_dssp             HHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHCTT----------SCGGGSBCHHHHHHHHHHHHHCGGGCCCTTCE
T ss_pred             HHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhccc----------ccccccCCHHHHHHHHHHHhcCccccCCcceE
Confidence            99999999986  6 99999999999999987654332          3556788999999999999999 889999999


Q ss_pred             EeeCCCcc
Q 025259          245 LVVAGGMA  252 (255)
Q Consensus       245 i~~dgG~~  252 (255)
                      |.+++|..
T Consensus       237 i~v~~g~~  244 (251)
T 3orf_A          237 VKFETKSK  244 (251)
T ss_dssp             EEEEEETT
T ss_pred             EEEecCCc
Confidence            99988754

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=4.3e-43  Score=295.55  Aligned_cols=232  Identities=19%  Similarity=0.185  Sum_probs=189.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ..+.++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++   +.++.++.+|++|+++++++++++ 
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~-   84 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGV-   84 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTC-
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhc-
Confidence            3456799999999999999999999999999999999999998877766544   668999999999999999888865 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                         +++|+||||||+..   +..+.+.++|++++++|+.+++.++++++|+|++  +||++||..+..+           
T Consensus        85 ---~~iD~lv~nAg~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--riv~isS~~~~~~~~~~~~~~~~~  156 (291)
T 3rd5_A           85 ---SGADVLINNAGIMA---VPYALTVDGFESQIGTNHLGHFALTNLLLPRLTD--RVVTVSSMAHWPGRINLEDLNWRS  156 (291)
T ss_dssp             ---CCEEEEEECCCCCS---CCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE--EEEEECCGGGTTCCCCSSCTTCSS
T ss_pred             ---CCCCEEEECCcCCC---CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--heeEeechhhccCCCCcccccccc
Confidence               78999999999854   3356788899999999999999999999999975  8999999988754           


Q ss_pred             --CCCChhhHHhHHHHHHHHHHHHHHhCC-C--cEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCC-hHHHHH
Q 025259          154 --PSAMAMYGVTKTALLGLTKALAAEMAP-D--TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGT-TGNMAA  227 (255)
Q Consensus       154 --~~~~~~y~~sKaa~~~l~~~la~e~~~-~--i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~va~  227 (255)
                        .++...|++||++++.|+++++.|+++ +  |+||+|+||+++|++......  ...... ...+.+++.. |+|+|+
T Consensus       157 ~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~A~  233 (291)
T 3rd5_A          157 RRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR--KLGDAL-MSAATRVVATDADFGAR  233 (291)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC-----------------------CHHHHHHHH
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch--HHHHHH-HHHHHHHHhCCHHHHHH
Confidence              345678999999999999999999986 6  999999999999999765421  112222 2234555555 999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .++|++++  .+++|+.|.+|||+..
T Consensus       234 ~~~~l~~~--~~~~G~~~~vdgG~~~  257 (291)
T 3rd5_A          234 QTLYAASQ--DLPGDSFVGPRFGYLG  257 (291)
T ss_dssp             HHHHHHHS--CCCTTCEEEETTSSSS
T ss_pred             HHHHHHcC--CCCCCceeCCcccccC
Confidence            99999988  4899999999999864

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2.1e-42  Score=287.77  Aligned_cols=233  Identities=27%  Similarity=0.413  Sum_probs=196.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.  +.++.++.+|++|+++++++++.+.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999998888777777553  4578899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      |++|+||||||...         .++|++.+++|+.+++.+++.++|+|++     .++||++||..+..+.++...|++
T Consensus        85 g~id~lv~~Ag~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  155 (267)
T 2gdz_A           85 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  155 (267)
T ss_dssp             SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCEEEECCCCCC---------hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHH
Confidence            99999999999742         2568999999999999999999999853     478999999999999899999999


Q ss_pred             hHHHHHHHHHHH--HHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH------HHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          163 TKTALLGLTKAL--AAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV------RKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       163 sKaa~~~l~~~l--a~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ||++++.+++++  +.|+++ +||||+|+||+++|++..........      .+......+..++.+|+|+|+.+++|+
T Consensus       156 sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~v~~l~  235 (267)
T 2gdz_A          156 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCHHHHHHHHHHHh
Confidence            999999999995  688887 99999999999999986543221110      011111112234779999999999999


Q ss_pred             CCCCCCccccEEeeCCCccC
Q 025259          234 SDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.  +++|++|.+|||...
T Consensus       236 s~~--~~~G~~~~v~gg~~~  253 (267)
T 2gdz_A          236 EDD--ALNGAIMKITTSKGI  253 (267)
T ss_dssp             HCT--TCSSCEEEEETTTEE
T ss_pred             cCc--CCCCcEEEecCCCcc
Confidence            875  499999999998753

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.7e-42  Score=282.28  Aligned_cols=223  Identities=19%  Similarity=0.211  Sum_probs=185.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+   .+|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~---~~d~   75 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDS---IPST   75 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSS---CCSE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhh---cCCE
Confidence            68999999999999999999999999999999998887766655   56788999999999999999887643   3499


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      ||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|++ +++||++||..+..+.++...|++||+++++|+
T Consensus        76 lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~  154 (230)
T 3guy_A           76 VVHSAGSGY-FGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLI  154 (230)
T ss_dssp             EEECCCCCC-CSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHH
T ss_pred             EEEeCCcCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHH
Confidence            999999875 778889999999999999999999999999999864 459999999999999999999999999999999


Q ss_pred             HHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC-CCCCCccccEEeeCC
Q 025259          172 KALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS-DDASYITGETLVVAG  249 (255)
Q Consensus       172 ~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s-~~~~~~~G~~i~~dg  249 (255)
                      ++++.|+++ +||||+|+||+++|++......          ..+.+++.+|+|+|+.+.++++ +...++||+.+..+.
T Consensus       155 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----------~~~~~~~~~~~dvA~~i~~l~~~~~~~~itg~~~~~~~  224 (230)
T 3guy_A          155 ESVRLELKGKPMKIIAVYPGGMATEFWETSGK----------SLDTSSFMSAEDAALMIHGALANIGNGYVSDITVNREG  224 (230)
T ss_dssp             HHHHHHTTTSSCEEEEEEECCC--------------------------CCCHHHHHHHHHHHCCEETTEEEEEEEEEC--
T ss_pred             HHHHHHHHhcCeEEEEEECCcccChHHHhcCC----------CCCcccCCCHHHHHHHHHHHHhCcCCCCccceeecCCC
Confidence            999999998 9999999999999998754321          2356789999999999999987 678899999999987


Q ss_pred             Ccc
Q 025259          250 GMA  252 (255)
Q Consensus       250 G~~  252 (255)
                      ...
T Consensus       225 ~~~  227 (230)
T 3guy_A          225 HHH  227 (230)
T ss_dssp             ---
T ss_pred             CCC
Confidence            653

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=3e-42  Score=296.46  Aligned_cols=241  Identities=13%  Similarity=0.086  Sum_probs=204.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHH------------HHHHHHHHcCCeEEEEEecCCCHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVD------------KAVEKLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      -.+|++|||||++|||+++++.|++ +|++|++++|+.+..+            ...+.+++.+.++..+.+|+++++++
T Consensus        45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v  124 (405)
T 3zu3_A           45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIK  124 (405)
T ss_dssp             TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred             CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence            4689999999999999999999999 9999999998765432            23445667788899999999999999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCC------------CCCCc---------------------CCCCHHHHHHHHHHHhH
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAVNP------------YAADL---------------------LKTKESVLDKLWEINVK  123 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~------------~~~~~---------------------~~~~~~~~~~~~~~n~~  123 (255)
                      +++++++.+.+|++|+||||||...            ..+++                     .+.++++|++++++|..
T Consensus       125 ~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~  204 (405)
T 3zu3_A          125 QLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGG  204 (405)
T ss_dssp             HHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhch
Confidence            9999999999999999999999741            13444                     78899999999999999


Q ss_pred             HHH-HHHHHHHh-cc-cCCCeEEEEcCcCccCCCCCC--hhhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChh
Q 025259          124 SSI-LLMQDAAP-HM-QKGSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHF  196 (255)
Q Consensus       124 ~~~-~~~~~~~~-~l-~~~~~iv~vss~~~~~~~~~~--~~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~  196 (255)
                      +.| .+++++.+ .| +++++||++||..+..+.+.+  ..|++||+++++|+++++.|+++  |||||+|.||++.|++
T Consensus       205 ~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~  284 (405)
T 3zu3_A          205 EDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQA  284 (405)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHH
T ss_pred             hHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCch
Confidence            998 78887764 44 356899999999999888877  99999999999999999999986  7999999999999999


Q ss_pred             hhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          197 AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      .......+........  ++++.++|||+++.+.||+++   ++.|+.+.+|++...|+
T Consensus       285 s~~ip~~p~y~~~l~~--~mkr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r~  338 (405)
T 3zu3_A          285 SSAIPMMPLYLSLLFK--VMKEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLRA  338 (405)
T ss_dssp             HHTSTTHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEEC
T ss_pred             hhcCCCCcHHHHHHHH--HHhcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCCC
Confidence            8766443322222222  688999999999999999987   67899999999988775

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=4.9e-43  Score=303.91  Aligned_cols=242  Identities=16%  Similarity=0.122  Sum_probs=202.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHH------------HHHHHHHHcCCeEEEEEecCCCHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVD------------KAVEKLKALGIEVIGIICHVSNEQHRK   77 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~D~~~~~~~~   77 (255)
                      .+|++|||||++|||+++++.|++ .|++|++++|+.+.++            .+.+++++.+.++..+.+|++++++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            589999999999999999999999 9999999999866533            234666777888999999999999999


Q ss_pred             HHHHHHHHHc-CCCcEEEECCCCC------------CCCCCc---------------------CCCCHHHHHHHHHHHhH
Q 025259           78 NLIDKTVEKY-GRIDVFVLNAAVN------------PYAADL---------------------LKTKESVLDKLWEINVK  123 (255)
Q Consensus        78 ~~~~~~~~~~-g~~d~lv~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n~~  123 (255)
                      ++++++.+.+ |++|+||||||..            ....++                     .+.+.++|++++++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 9999999999972            113344                     36899999999999999


Q ss_pred             HHH-HHHHHHHh-cc-cCCCeEEEEcCcCccCCCCCC--hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhh
Q 025259          124 SSI-LLMQDAAP-HM-QKGSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       124 ~~~-~~~~~~~~-~l-~~~~~iv~vss~~~~~~~~~~--~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~  197 (255)
                      +.| .+++++.+ .| +++++||++||..+..+.+.+  ..|++||+|+.+|+++|+.|+++ |||||+|+||+++|++.
T Consensus       220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~  299 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLADGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQAS  299 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTG
T ss_pred             hHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhh
Confidence            997 78888765 34 356899999999998887765  89999999999999999999999 99999999999999998


Q ss_pred             hhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc-ccEEeeCCCccCCC
Q 025259          198 QALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT-GETLVVAGGMASRL  255 (255)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~-G~~i~~dgG~~~~~  255 (255)
                      ......+......  ..|+++.++||||++.+.||+++.- |.+ |+...+|++..+|+
T Consensus       300 ~~ip~~~~~~~~~--~~~m~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r~  355 (422)
T 3s8m_A          300 AAIPVMPLYISMV--YKIMKEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLRL  355 (422)
T ss_dssp             GGSTHHHHHHHHH--HHHHHHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEES
T ss_pred             hcCCCChHHHHHH--HhhhcCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCcc
Confidence            7653322212211  2378899999999999999998854 554 77777999887775

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=2.7e-41  Score=288.04  Aligned_cols=229  Identities=24%  Similarity=0.337  Sum_probs=191.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC--eEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI--EVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |+++++|++|||||+||||++++++|+++|++|++++|+.+.+++..+++...+.  ++.++.+|++++++++++++.+.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999999999999999999999998887655  89999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--------CCCeEEEEcCcCccCCCCC
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--------KGSSVVFISSIAGYQPPSA  156 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--------~~~~iv~vss~~~~~~~~~  156 (255)
                      +.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|.        +.++||++||..+..+.++
T Consensus        83 ~~~g~id~lv~nAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~  161 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNL-FQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGS  161 (319)
T ss_dssp             HHTCCEEEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSS
T ss_pred             HhCCCCCEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCC
Confidence            99999999999999875 77899999999999999999999999999999984        3679999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHH---------hhccCCC-CCCCChHHH
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKA---------LEGKTLL-NRLGTTGNM  225 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~---------~~~~~~~-~~~~~~~~v  225 (255)
                      ...|++||+|+++|+++++.|+.+ ||+|++|+||+|+|++.......+.....         ....... ....+|+++
T Consensus       162 ~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~v  241 (319)
T 3ioy_A          162 PGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDVI  241 (319)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSBCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCCCHHHH
Confidence            999999999999999999999998 99999999999999987643221111000         0000000 112699999


Q ss_pred             HHHHHHhcCCC
Q 025259          226 AAAIAFLASDD  236 (255)
Q Consensus       226 a~~~~~l~s~~  236 (255)
                      |+.++..+...
T Consensus       242 A~~~~~al~~~  252 (319)
T 3ioy_A          242 GARVIEAMKAN  252 (319)
T ss_dssp             HHHHHHHHHTT
T ss_pred             HHHHHHHHHcC
Confidence            99999987654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=1.6e-41  Score=289.24  Aligned_cols=229  Identities=22%  Similarity=0.364  Sum_probs=200.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe---------CChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS---------RKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~---------r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      +++++|++|||||++|||++++++|+++|++|++++         |+.+.+++..+++...+...   .+|+++.+++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~---~~D~~~~~~~~~   81 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKA---VANYDSVEAGEK   81 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEE---EEECCCGGGHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeE---EEeCCCHHHHHH
Confidence            468899999999999999999999999999999964         56777888888887766543   489999999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSA  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~  156 (255)
                      +++++.+.++++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+..+.++
T Consensus        82 ~~~~~~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~  160 (319)
T 1gz6_A           82 LVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  160 (319)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCCCCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCC
Confidence            99999999999999999999875 56788899999999999999999999999999985  4579999999988888889


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ...|++||++++.|+++++.|+++ ||+||+|+||++ |++.....+ ....          ...+|+|+|+.++||+++
T Consensus       161 ~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~~-~~~~----------~~~~p~dvA~~~~~l~s~  228 (319)
T 1gz6_A          161 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVMP-EDLV----------EALKPEYVAPLVLWLCHE  228 (319)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGSC-HHHH----------HHSCGGGTHHHHHHHTST
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccCC-hhhh----------ccCCHHHHHHHHHHHhCc
Confidence            999999999999999999999998 999999999998 877654322 2111          135899999999999987


Q ss_pred             CCCCccccEEeeCCCccC
Q 025259          236 DASYITGETLVVAGGMAS  253 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~  253 (255)
                      . .+++|++|.+|||+..
T Consensus       229 ~-~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          229 S-CEENGGLFEVGAGWIG  245 (319)
T ss_dssp             T-CCCCSCEEEEETTEEE
T ss_pred             h-hhcCCCEEEECCCeEE
Confidence            4 5789999999999753

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-41  Score=276.63  Aligned_cols=225  Identities=23%  Similarity=0.338  Sum_probs=197.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||++++++|+++|++|++++|+.+ .           .++.++.+|++++++++++++++ +.++++|
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d   68 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLF   68 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCce
Confidence            689999999999999999999999999999999875 1           13478899999999999999999 8889999


Q ss_pred             EEEECCCCCCCCCCcCCC----CHHHHHHHHHHHhHHHHHHHHHHHhcccCCC--------eEEEEcCcCccCCCCCChh
Q 025259           92 VFVLNAAVNPYAADLLKT----KESVLDKLWEINVKSSILLMQDAAPHMQKGS--------SVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~--------~iv~vss~~~~~~~~~~~~  159 (255)
                      ++|||||... ..++.+.    +.++|++.+++|+.+++.+++++.+.|++.+        +||++||..+..+.++...
T Consensus        69 ~li~~ag~~~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           69 AVVSAAGVGL-AEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEEECCCCCC-CCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEEcccccC-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            9999999865 4444443    4559999999999999999999999986432        9999999999999899999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHHHhcCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~  237 (255)
                      |+++|++++.++++++.|+++ +|++++|.||+++|++....  .+...+......|. +++.+|+|+|+.+++++++  
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~--  223 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC--
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc--chhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC--
Confidence            999999999999999999988 99999999999999987653  23344555566677 8899999999999999987  


Q ss_pred             CCccccEEeeCCCccCC
Q 025259          238 SYITGETLVVAGGMASR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      .+++|+.|.+|||..++
T Consensus       224 ~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCCCCcEEEEcCCeecC
Confidence            78999999999998764

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=5.1e-42  Score=283.44  Aligned_cols=227  Identities=18%  Similarity=0.258  Sum_probs=190.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCH-HHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNE-QHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~-~~~~~~~~~~~   84 (255)
                      ++++|+++||||++|||++++++|+++|++ |++++|+.+.  +..+++.+.  +.++.++.+|++|+ ++++++++++.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~--~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   79 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP--TALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIF   79 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH--HHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH--HHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHH
Confidence            578999999999999999999999999997 9999998742  222333332  45789999999998 99999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCCChh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +.++++|+||||||..         +.++|++.+++|+.+++.+++++.|+|++     .++||++||..+..+.++...
T Consensus        80 ~~~g~id~lv~~Ag~~---------~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  150 (254)
T 1sby_A           80 DQLKTVDILINGAGIL---------DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHHSCCCEEEECCCCC---------CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HhcCCCCEEEECCccC---------CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchH
Confidence            9999999999999974         23568999999999999999999999853     478999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      |++||++++.|+++++.++.+ +|+|++|+||+++|++......    .+.. .......|   +.+|+|+|+.++++++
T Consensus       151 Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRV-AELLLSHP---TQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTH-HHHHTTSC---CEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHH-HHHHhcCC---CCCHHHHHHHHHHHHH
Confidence            999999999999999999887 9999999999999998764321    1111 22222222   4589999999999985


Q ss_pred             CCCCCccccEEeeCCCccC
Q 025259          235 DDASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                         .+.+|+++.+|||...
T Consensus       227 ---~~~~G~~~~v~gG~~~  242 (254)
T 1sby_A          227 ---ANKNGAIWKLDLGTLE  242 (254)
T ss_dssp             ---HCCTTCEEEEETTEEE
T ss_pred             ---cCCCCCEEEEeCCcee
Confidence               4689999999999643

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=3.5e-42  Score=316.28  Aligned_cols=236  Identities=25%  Similarity=0.369  Sum_probs=188.4

Q ss_pred             ccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC---------ChhHHHHHHHHHHHcCCeEEEEEecCCC
Q 025259            2 EKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR---------KQKNVDKAVEKLKALGIEVIGIICHVSN   72 (255)
Q Consensus         2 ~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~D~~~   72 (255)
                      .+.+...+++||++|||||++|||+++|++|+++|++|++++|         +.+.+++..++++..+..+   .+|+++
T Consensus         9 ~~~~~~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~D~~d   85 (613)
T 3oml_A            9 SSSDGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEA---VADYNS   85 (613)
T ss_dssp             ------CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCE---EECCCC
T ss_pred             cCcccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeE---EEEeCC
Confidence            4566677899999999999999999999999999999999988         7777888888888876654   489999


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCc
Q 025259           73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAG  150 (255)
Q Consensus        73 ~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~  150 (255)
                      .++++++++++.+.+|++|+||||||+.. ..++.+.+.++|++++++|+.|++.++++++|+|++  .++||++||..+
T Consensus        86 ~~~~~~~~~~~~~~~g~iDiLVnnAGi~~-~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~  164 (613)
T 3oml_A           86 VIDGAKVIETAIKAFGRVDILVNNAGILR-DRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSG  164 (613)
T ss_dssp             GGGHHHHHC----------CEECCCCCCC-CCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHH
T ss_pred             HHHHHHHHHHHHHHCCCCcEEEECCCCCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence            99999999999999999999999999875 678899999999999999999999999999999964  479999999999


Q ss_pred             cCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHH
Q 025259          151 YQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI  229 (255)
Q Consensus       151 ~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (255)
                      ..+.++...|++||+|+++|+++++.|+++ ||+||+|+||++ |++.....+ +..          .+..+|+|+|+.+
T Consensus       165 ~~~~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~~-~~~----------~~~~~pedvA~~v  232 (613)
T 3oml_A          165 IYGNFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGILP-DIL----------FNELKPKLIAPVV  232 (613)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCC-HHH----------HTTCCGGGTHHHH
T ss_pred             cCCCCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhccc-hhh----------hhcCCHHHHHHHH
Confidence            999999999999999999999999999998 999999999975 566544332 111          1345899999999


Q ss_pred             HHhcCCCCCCccccEEeeCCCccCC
Q 025259          230 AFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      .||+++. .++||++|.+|||...+
T Consensus       233 ~~L~s~~-~~~tG~~i~vdGG~~~~  256 (613)
T 3oml_A          233 AYLCHES-CEDNGSYIESAAGWATK  256 (613)
T ss_dssp             HHTTSTT-CCCCSCEEEEETTEEEE
T ss_pred             HHhcCCC-cCCCceEEEECCCeEEE
Confidence            9999998 89999999999998753

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=7.4e-41  Score=280.40  Aligned_cols=234  Identities=27%  Similarity=0.337  Sum_probs=196.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|+++|++|++++|+.+.+++..++   .+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (281)
T 3m1a_A            2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA---YPDRAEAISLDVTDGERIDVVAADVLARYG   78 (281)
T ss_dssp             --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH---CTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---ccCCceEEEeeCCCHHHHHHHHHHHHHhCC
Confidence            35789999999999999999999999999999999999887766543   356799999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|+|+  ..++||++||..+..+.++...|++||++
T Consensus        79 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (281)
T 3m1a_A           79 RVDVLVNNAGRTQ-VGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAA  157 (281)
T ss_dssp             CCSEEEECCCCEE-ECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHH
Confidence            9999999999875 67788999999999999999999999999999985  45799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-------C-CH---HHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-------G-ND---AVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-------~-~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ++.++++++.|+++ +|+|++|.||+++|++.....       . ..   ..........+.+++.+|+|+|++++++++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~a~~~~~~  237 (281)
T 3m1a_A          158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGSQPGDPAKAAAAIRLALD  237 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC-----CBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCCCCCCHHHHHHHHHHHHh
Confidence            99999999999998 999999999999999864321       0 01   112233344677789999999999999997


Q ss_pred             CCCCCccccEEeeCC
Q 025259          235 DDASYITGETLVVAG  249 (255)
Q Consensus       235 ~~~~~~~G~~i~~dg  249 (255)
                      ...   .|..+.+.+
T Consensus       238 ~~~---~~~~~~l~s  249 (281)
T 3m1a_A          238 TEK---TPLRLALGG  249 (281)
T ss_dssp             SSS---CCSEEEESH
T ss_pred             CCC---CCeEEecCc
Confidence            653   345555543

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=1.9e-40  Score=270.61  Aligned_cols=222  Identities=23%  Similarity=0.297  Sum_probs=187.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.    ++.++.+|++++++++++++++.+.++++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   79 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELE----GALPLPGDVREEGDWARAVAAMEEAFGEL   79 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----hceEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            57899999999999999999999999999999999887776655442    57889999999999999999999999999


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      |++|||||... ..++.+.+.++|++.+++|+.+++.+++.++|.|++  .++||++||..+..+.++...|+++|++++
T Consensus        80 d~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~  158 (234)
T 2ehd_A           80 SALVNNAGVGV-MKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLL  158 (234)
T ss_dssp             CEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHH
T ss_pred             CEEEECCCcCC-CCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHH
Confidence            99999999865 667888999999999999999999999999999864  479999999999999899999999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      .++++++.|+.+ +|++++|.||+++|++.....  ..    .       ...+|+|+|+.+++++++...+++|+++..
T Consensus       159 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~----~-------~~~~~~dvA~~~~~l~~~~~~~~~g~~~~~  225 (234)
T 2ehd_A          159 GLAGAAMLDLREANVRVVNVLPGSVDTGFAGNTP--GQ----A-------WKLKPEDVAQAVLFALEMPGHAMVSEIELR  225 (234)
T ss_dssp             HHHHHHHHHHGGGTEEEEEEECC-----------------------------CCHHHHHHHHHHHHHSCCSSCCCEEECC
T ss_pred             HHHHHHHHHHhhcCcEEEEEEeCCCcCCcccccc--cc----c-------CCCCHHHHHHHHHHHhCCCcccccceEEEe
Confidence            999999999988 999999999999999865321  10    0       146999999999999999999999998766


Q ss_pred             CCC
Q 025259          248 AGG  250 (255)
Q Consensus       248 dgG  250 (255)
                      +++
T Consensus       226 ~~~  228 (234)
T 2ehd_A          226 PTR  228 (234)
T ss_dssp             C--
T ss_pred             ecC
Confidence            554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.7e-40  Score=271.63  Aligned_cols=221  Identities=20%  Similarity=0.239  Sum_probs=189.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++|++|||||++|||++++++|+++|  ++|++++|+.+.++++.+.   .+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   78 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI---KDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC---CCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc---cCCceEEEEeecCCHHHHHHHHHHHHHhcC
Confidence            57999999999999999999999999  9999999998877654321   256789999999999999999999999998


Q ss_pred             --CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--------C-----CCeEEEEcCcCccCC
Q 025259           89 --RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--------K-----GSSVVFISSIAGYQP  153 (255)
Q Consensus        89 --~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--------~-----~~~iv~vss~~~~~~  153 (255)
                        ++|+||||||......++.+.+.++|++.+++|+.+++.++++++|+|+        +     .++||++||..+..+
T Consensus        79 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence              9999999999864356788899999999999999999999999999884        2     579999999998877


Q ss_pred             C-------CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHH
Q 025259          154 P-------SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNM  225 (255)
Q Consensus       154 ~-------~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  225 (255)
                      .       ++...|++||++++.|+++++.|+++ +|++++|.||+++|++...                 ....+|+|+
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~~  221 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK-----------------NAALTVEQS  221 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHH
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-----------------CCCCCHHHH
Confidence            6       67889999999999999999999988 9999999999999998642                 135789999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          226 AAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      |+.++++++....+++|+.+.+|||.
T Consensus       222 a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          222 TAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHhcccccCCCeEEEECCcC
Confidence            99999999988888999999999985

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2e-40  Score=283.06  Aligned_cols=238  Identities=21%  Similarity=0.245  Sum_probs=187.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-----hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-----QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++++|++|||||++|||++++++|+++|++|+++.|+     .+.++++.+.+...+.++.++.+|++|+++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            3568999999999999999999999999999987765     56667777777777888999999999999999999999


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccC-CCCCChhh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQ-PPSAMAMY  160 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~-~~~~~~~y  160 (255)
                      .+++|++|+||||||+.. .+++.+.+.++|++++++|+.|++.++++++|+|+  +.++||++||..+.. +.++...|
T Consensus        82 ~~~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y  160 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMV-FGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPY  160 (324)
T ss_dssp             HHHHSCCSEEEECCCCCB-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHH
T ss_pred             HHHcCCCCEEEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhH
Confidence            999999999999999875 77889999999999999999999999999999995  568999999999885 45667899


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---CC-HHHHHHh------------hcc--CCCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---GN-DAVRKAL------------EGK--TLLNRLGT  221 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---~~-~~~~~~~------------~~~--~~~~~~~~  221 (255)
                      ++||+++++|+++++.|+++ ||+|++|.||+++|++.....   +. .......            ...  .......+
T Consensus       161 ~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  240 (324)
T 3u9l_A          161 FAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIVPPDAD  240 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTSCTTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhcCCCCC
Confidence            99999999999999999998 999999999999977542211   11 1111000            000  01122368


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      |++||+++++++..... .....+.++
T Consensus       241 p~~vA~aiv~~~~~~~~-~~~~~~~~g  266 (324)
T 3u9l_A          241 VSLVADAIVRVVGTASG-KRPFRVHVD  266 (324)
T ss_dssp             THHHHHHHHHHHTSCTT-CCCSEEEEC
T ss_pred             HHHHHHHHHHHhcCCCC-CCCeEEEeC
Confidence            89999999998865432 223455554

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=9.4e-40  Score=271.52  Aligned_cols=227  Identities=19%  Similarity=0.237  Sum_probs=198.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEG---ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G---~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..++++|++|||||++|||++++++|+++|   ++|++++|+.+..+.+ +++.+.+.++.++.+|++++++++++++++
T Consensus        16 ~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~   94 (267)
T 1sny_A           16 PRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADI   94 (267)
T ss_dssp             ----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHH
Confidence            346789999999999999999999999999   9999999998766543 444444668999999999999999999999


Q ss_pred             HHHcC--CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-------------CCeEEEEcCc
Q 025259           84 VEKYG--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-------------GSSVVFISSI  148 (255)
Q Consensus        84 ~~~~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-------------~~~iv~vss~  148 (255)
                      .+.++  ++|+||||||......++.+.+.++|++.+++|+.+++.+++++.|+|++             .++||++||.
T Consensus        95 ~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~  174 (267)
T 1sny_A           95 EGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSI  174 (267)
T ss_dssp             HHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCG
T ss_pred             HHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecc
Confidence            99998  89999999998653567788899999999999999999999999998852             4789999999


Q ss_pred             CccCCCC---CChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHH
Q 025259          149 AGYQPPS---AMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN  224 (255)
Q Consensus       149 ~~~~~~~---~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (255)
                      .+..+.+   +...|++||++++.|+++++.|+.+ +|++++|.||+++|++...                 ....+|++
T Consensus       175 ~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----------------~~~~~~~~  237 (267)
T 1sny_A          175 LGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-----------------SAPLDVPT  237 (267)
T ss_dssp             GGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------------TCSBCHHH
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------------CCCCCHHH
Confidence            9877653   7788999999999999999999988 9999999999999998632                 13579999


Q ss_pred             HHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          225 MAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       225 va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      +|+.++++++......+|+.+.+|||.
T Consensus       238 ~a~~~~~~~~~~~~~~~G~~~~~~g~~  264 (267)
T 1sny_A          238 STGQIVQTISKLGEKQNGGFVNYDGTP  264 (267)
T ss_dssp             HHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence            999999999888888999999999985

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=4.2e-39  Score=272.79  Aligned_cols=228  Identities=26%  Similarity=0.314  Sum_probs=188.9

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCH-HHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNE-QHRKN   78 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~-~~~~~   78 (255)
                      |....-+..+++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++.+.+ .++.++.+|++++ +++++
T Consensus         1 m~~~~~~~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~   80 (311)
T 3o26_A            1 MPETCPNTVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSS   80 (311)
T ss_dssp             -----------CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHH
T ss_pred             CCCCCCCccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHH
Confidence            444444456789999999999999999999999999999999999999999999988764 5799999999998 99999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCC-----------------------------CCCcCCCCHHHHHHHHHHHhHHHHHHH
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPY-----------------------------AADLLKTKESVLDKLWEINVKSSILLM  129 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~-----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~~~  129 (255)
                      +++.+.+.++++|+||||||+...                             ..++.+.+.++|++.+++|+.|++.++
T Consensus        81 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~  160 (311)
T 3o26_A           81 LADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVT  160 (311)
T ss_dssp             HHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred             HHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHH
Confidence            999999999999999999998631                             124567789999999999999999999


Q ss_pred             HHHHhccc--CCCeEEEEcCcCccCCC-------------------------------------------CCChhhHHhH
Q 025259          130 QDAAPHMQ--KGSSVVFISSIAGYQPP-------------------------------------------SAMAMYGVTK  164 (255)
Q Consensus       130 ~~~~~~l~--~~~~iv~vss~~~~~~~-------------------------------------------~~~~~y~~sK  164 (255)
                      ++++|+|+  +.++||++||..+..+.                                           ++...|++||
T Consensus       161 ~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK  240 (311)
T 3o26_A          161 EVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSK  240 (311)
T ss_dssp             HHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHH
T ss_pred             HHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHH
Confidence            99999986  44799999999886543                                           3567899999


Q ss_pred             HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          165 TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       165 aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++++|+++++.|+.+ |+||+|+||+|+|+|....                 ...+|++.++.+++++.......+|..
T Consensus       241 ~a~~~~~~~la~e~~~-i~v~~v~PG~v~T~~~~~~-----------------~~~~~~~~a~~~~~~~~~~~~~~~g~~  302 (311)
T 3o26_A          241 ACLNAYTRVLANKIPK-FQVNCVCPGLVKTEMNYGI-----------------GNYTAEEGAEHVVRIALFPDDGPSGFF  302 (311)
T ss_dssp             HHHHHHHHHHHHHCTT-SEEEEECCCSBCSGGGTTC-----------------CSBCHHHHHHHHHHHHTCCSSCCCSCE
T ss_pred             HHHHHHHHHHHhhcCC-ceEEEecCCceecCCcCCC-----------------CCCCHHHHHHHHHHHHhCCCCCCCceE
Confidence            9999999999999975 9999999999999986542                 125899999999998876555555655


Q ss_pred             Ee
Q 025259          245 LV  246 (255)
Q Consensus       245 i~  246 (255)
                      +.
T Consensus       303 ~~  304 (311)
T 3o26_A          303 YD  304 (311)
T ss_dssp             ET
T ss_pred             ec
Confidence            43

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=1.1e-39  Score=285.02  Aligned_cols=242  Identities=13%  Similarity=0.116  Sum_probs=202.7

Q ss_pred             CCCCEEEEeCCCCchHHH--HHHHHHHcCCeEEEEeCChhH------------HHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259           10 FQGKVAVVTASTQGIGLG--VAERLGLEGASVVISSRKQKN------------VDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~--~a~~l~~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      +.+|++|||||++|||++  ++++|+++|++|++++|+.+.            .+...+.+++.+.++..+.||++++++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            679999999999999999  999999999999999997543            345555566678889999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCC------------CCCCCc---------------------CCCCHHHHHHHHHHHh
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVN------------PYAADL---------------------LKTKESVLDKLWEINV  122 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~------------~~~~~~---------------------~~~~~~~~~~~~~~n~  122 (255)
                      ++++++++.+.+|++|+||||||..            +..+++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            9999999999999999999999974            112333                     4679999999999999


Q ss_pred             HHHH-HHHHHHHhc-c-cCCCeEEEEcCcCccCCCCCC--hhhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccCh
Q 025259          123 KSSI-LLMQDAAPH-M-QKGSSVVFISSIAGYQPPSAM--AMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTH  195 (255)
Q Consensus       123 ~~~~-~~~~~~~~~-l-~~~~~iv~vss~~~~~~~~~~--~~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~  195 (255)
                      .+.| .+++++.+. + .++++||++||..+..+.+.+  ..|++||+|+++|+++|+.|+++  |||||+|+||+++|+
T Consensus       218 ~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~  297 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK  297 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred             HHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence            9988 777877753 3 356899999999999888887  99999999999999999999987  899999999999999


Q ss_pred             hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          196 FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      +.......+.......  .++++.++||++++.+.||+++  ...+|+.+.+|||...|+
T Consensus       298 ~s~~ip~~p~y~~~~~--~~mk~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r~  353 (418)
T 4eue_A          298 ASAYIPTFPLYAAILY--KVMKEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLRM  353 (418)
T ss_dssp             HHHTSTTHHHHHHHHH--HHHHHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEES
T ss_pred             hhhcCCCCcHHHHHHH--HHHhhcCChHHHHHHHHHHhhc--cccCCCccccCCCceeeC
Confidence            9876643332222222  1466789999999999999987  556899999999877653

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=2e-39  Score=270.54  Aligned_cols=218  Identities=23%  Similarity=0.341  Sum_probs=194.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++|++|||||++|||++++++|+++|++|++++|+.+.+++..+++++.+.++.++.+|++++++++++++++.+.
T Consensus        26 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~  105 (272)
T 1yb1_A           26 RKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAE  105 (272)
T ss_dssp             CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999999999999999999999888888887788999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      ++++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+  +.++||++||..+..+.++...|+++|
T Consensus       106 ~g~iD~li~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  184 (272)
T 1yb1_A          106 IGDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSK  184 (272)
T ss_dssp             TCCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHH
T ss_pred             CCCCcEEEECCCcCC-CcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHH
Confidence            999999999999875 56777888999999999999999999999999985  357999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhC---C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          165 TALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       165 aa~~~l~~~la~e~~---~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      ++++.++++++.|+.   + +|+|++|.||+++|++...    .        ..+.+++.+|+|+|+.+++++....
T Consensus       185 ~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~--------~~~~~~~~~~~dva~~i~~~~~~~~  249 (272)
T 1yb1_A          185 FAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----P--------STSLGPTLEPEEVVNRLMHGILTEQ  249 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----T--------HHHHCCCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----c--------cccccCCCCHHHHHHHHHHHHHcCC
Confidence            999999999999995   4 9999999999999998532    1        0124568899999999999987653

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=5.3e-39  Score=267.52  Aligned_cols=221  Identities=24%  Similarity=0.251  Sum_probs=192.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++|++|||||++|||++++++|++ .|++|++++|+.+.+++..+++...+.++.++.+|++++++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3689999999999999999999999 999999999999998888888887777889999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCC-HHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC--------------
Q 025259           89 RIDVFVLNAAVNPYAADLLKTK-ESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP--------------  153 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~--------------  153 (255)
                      ++|+||||||... .. ..+.+ .+++++.+++|+.+++.+++++.|+|++.++||++||..+..+              
T Consensus        82 ~id~li~~Ag~~~-~~-~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~  159 (276)
T 1wma_A           82 GLDVLVNNAGIAF-KV-ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRS  159 (276)
T ss_dssp             SEEEEEECCCCCC-CT-TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             CCCEEEECCcccc-cC-CCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccc
Confidence            9999999999764 22 23444 5889999999999999999999999977789999999877532              


Q ss_pred             ---------------------------CCCChhhHHhHHHHHHHHHHHHHHhCC-----CcEEEEEeCCcccChhhhhhc
Q 025259          154 ---------------------------PSAMAMYGVTKTALLGLTKALAAEMAP-----DTRVNCVAPGFVPTHFAQALL  201 (255)
Q Consensus       154 ---------------------------~~~~~~y~~sKaa~~~l~~~la~e~~~-----~i~v~~v~pg~v~t~~~~~~~  201 (255)
                                                 ..+...|++||++++.|++.++.++.+     +|+|++|+||+++|++...  
T Consensus       160 ~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~--  237 (276)
T 1wma_A          160 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP--  237 (276)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT--
T ss_pred             cccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc--
Confidence                                       012378999999999999999999864     8999999999999998642  


Q ss_pred             CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC--CCCccccEEeeCCC
Q 025259          202 GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                                     ..+.+|+|+|+.++++++..  ..+++|+.|. +++
T Consensus       238 ---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~  272 (276)
T 1wma_A          238 ---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  272 (276)
T ss_dssp             ---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             ---------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCc
Confidence                           24689999999999999854  3689999998 544

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=7e-41  Score=276.85  Aligned_cols=217  Identities=27%  Similarity=0.366  Sum_probs=171.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||++++++|+++|++|++++|+++.++.             .+.+|++++++++++++++   .+++|+
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------------~~~~Dl~~~~~v~~~~~~~---~~~id~   65 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA-------------DLSTAEGRKQAIADVLAKC---SKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHTTC---TTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc-------------ccccCCCCHHHHHHHHHHh---CCCCCE
Confidence            689999999999999999999999999999998764321             1679999999988887743   278999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCcc-------------------
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGY-------------------  151 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~-------------------  151 (255)
                      ||||||.....        +.|++.+++|+.+++.++++++|+|++.  ++||++||..+.                   
T Consensus        66 lv~~Ag~~~~~--------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~  137 (257)
T 1fjh_A           66 LVLCAGLGPQT--------KVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEA  137 (257)
T ss_dssp             EEECCCCCTTC--------SSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHH
T ss_pred             EEECCCCCCCc--------ccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchh
Confidence            99999975311        1289999999999999999999999644  799999999888                   


Q ss_pred             ---------CCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhc-cCCCCCCC
Q 025259          152 ---------QPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEG-KTLLNRLG  220 (255)
Q Consensus       152 ---------~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~  220 (255)
                               .+.++...|++||++++.++++++.|+++ +|+|++|+||+++|++................ ..|.+++.
T Consensus       138 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (257)
T 1fjh_A          138 KARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRRA  217 (257)
T ss_dssp             HHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSCC
T ss_pred             hhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhcccccCCCC
Confidence                     34456789999999999999999999987 99999999999999987654221111111111 45778899


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|+|+.+++++++...+++|+.|.+|||...
T Consensus       218 ~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          218 EPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             CTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            999999999999998888999999999999753

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=5e-40  Score=270.14  Aligned_cols=215  Identities=24%  Similarity=0.286  Sum_probs=156.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|++|||||++|||++++++|++ |+.|++++|+++.+++..+     ..++.++.+|++++++ .+.+.+..+.++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~-----~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   74 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE-----IEGVEPIESDIVKEVL-EEGGVDKLKNLD   74 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT-----STTEEEEECCHHHHHH-TSSSCGGGTTCS
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh-----hcCCcceecccchHHH-HHHHHHHHHhcC
Confidence            57899999999999999999999988 9999999999887765543     2358889999998877 444555556788


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      ++|+||||||... ..++.+.+.++|++.+++|+.+++.++++++|.|+ .+++||++||..+..+.++...|++||+++
T Consensus        75 ~id~lv~~Ag~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  153 (245)
T 3e9n_A           75 HVDTLVHAAAVAR-DTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHAL  153 (245)
T ss_dssp             CCSEEEECC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHH
T ss_pred             CCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHH
Confidence            9999999999875 67788889999999999999999999999999985 358999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +.|+++++.|+++ +|+|++|+||+++|++........      ....+..++.+|+|+|+.++++++...
T Consensus       154 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~------~~~~~~~~~~~p~dvA~~i~~l~~~~~  218 (245)
T 3e9n_A          154 RGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDSQ------GTNFRPEIYIEPKEIANAIRFVIDAGE  218 (245)
T ss_dssp             HHHHHHHHHHHGGGTCEEEEEEECCC----------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhhh------hcccccccCCCHHHHHHHHHHHHcCCC
Confidence            9999999999998 999999999999999876543221      122345678899999999999997654

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=2e-39  Score=277.30  Aligned_cols=232  Identities=21%  Similarity=0.277  Sum_probs=185.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH------cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA------LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ++|++|||||++|||++++++|+++|++|++++|+.+.+++..+.++.      .+.++.++.+|++++++++++++++ 
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~-   79 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERV-   79 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTC-
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHH-
Confidence            478999999999999999999999999998888876554444333332      2467899999999999999999988 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                       .++++|+||||||... ..++.+.+.++|++++++|+.+++.++++++|+|+  +.++||++||..+..+.+....|++
T Consensus        80 -~~g~iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~a  157 (327)
T 1jtv_A           80 -TEGRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCA  157 (327)
T ss_dssp             -TTSCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHH
T ss_pred             -hcCCCCEEEECCCcCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHH
Confidence             3588999999999865 66788899999999999999999999999999985  5689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH---------HHHHHhhc-----cCCCCCC-CChHHHH
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND---------AVRKALEG-----KTLLNRL-GTTGNMA  226 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~---------~~~~~~~~-----~~~~~~~-~~~~~va  226 (255)
                      ||+++++|+++++.|+++ +|+|++|+||+++|+|........         ...+....     ..+.+++ .+|+|+|
T Consensus       158 SK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA  237 (327)
T 1jtv_A          158 SKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA  237 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhhcCCCHHHHH
Confidence            999999999999999998 999999999999999975532211         10000000     0112233 5899999


Q ss_pred             HHHHHhcCC---CCCCccccEE
Q 025259          227 AAIAFLASD---DASYITGETL  245 (255)
Q Consensus       227 ~~~~~l~s~---~~~~~~G~~i  245 (255)
                      +.++++++.   ...+++|+.+
T Consensus       238 ~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          238 EVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHcCCCCCeEEEeCchH
Confidence            999999874   3567888754

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=2.9e-37  Score=259.25  Aligned_cols=217  Identities=23%  Similarity=0.314  Sum_probs=189.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|++|||||+||||++++++|+++|++|++++|+++.+++..+++.+.+. ++.++.+|++|+++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999999999888888877654 7899999999999999999999999


Q ss_pred             cCCCcEEEEC-CCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLN-AAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|++||| +|..  ..+..+.+.+++++.+++|+.+++.+++++.|.|+ ..++||++||..+..+.++...|++||
T Consensus       104 ~g~iD~li~naag~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  181 (286)
T 1xu9_A          104 MGGLDMLILNHITNT--SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASK  181 (286)
T ss_dssp             HTSCSEEEECCCCCC--CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             cCCCCEEEECCccCC--CCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHH
Confidence            9999999999 5654  33456678999999999999999999999999885 458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHh--CC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          165 TALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       165 aa~~~l~~~la~e~--~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++++.++++++.|+  .. +|++++|+||+++|++........          ......+|+|+|+.++..+...
T Consensus       182 ~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~----------~~~~~~~~~~vA~~i~~~~~~~  246 (286)
T 1xu9_A          182 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGGALR  246 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcccc----------ccCCCCCHHHHHHHHHHHHhcC
Confidence            99999999999998  45 999999999999999875432110          1123679999999999887543

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=2.5e-36  Score=240.83  Aligned_cols=199  Identities=19%  Similarity=0.199  Sum_probs=176.8

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GK-VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k-~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +| ++|||||+|+||++++++|+ +|++|++++|+.+                 .+.+|++++++++++++.+    +++
T Consensus         2 ~kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------------~~~~D~~~~~~~~~~~~~~----~~~   59 (202)
T 3d7l_A            2 NAMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------------DVTVDITNIDSIKKMYEQV----GKV   59 (202)
T ss_dssp             CSCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------------SEECCTTCHHHHHHHHHHH----CCE
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------------ceeeecCCHHHHHHHHHHh----CCC
Confidence            44 79999999999999999999 9999999999874                 4789999999999988765    789


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      |++|||||... ..++.+.++++|++.+++|+.+++.+++++.+.|+++++||++||..+..+.++...|+++|++++.+
T Consensus        60 d~vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           60 DAIVSATGSAT-FSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             EEEEECCCCCC-CCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             CEEEECCCCCC-CCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            99999999765 66788889999999999999999999999999987668999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      +++++.|+ + +|+++.|.||+++|++...           ....+...+.+|+|+|+.++++++   .+++|++|++|
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~-----------~~~~~~~~~~~~~dva~~~~~~~~---~~~~G~~~~vd  202 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDKL-----------EPFFEGFLPVPAAKVARAFEKSVF---GAQTGESYQVY  202 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHHH-----------GGGSTTCCCBCHHHHHHHHHHHHH---SCCCSCEEEEC
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhhh-----------hhhccccCCCCHHHHHHHHHHhhh---ccccCceEecC
Confidence            99999999 6 9999999999999997531           122345678899999999988873   56899999987

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=7.6e-37  Score=300.89  Aligned_cols=238  Identities=20%  Similarity=0.211  Sum_probs=198.7

Q ss_pred             ccCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQG-IGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      +++++|++|||||++| ||++++++|++.|++|+++ .|+.+.+++..+++.+    .+.++.++.||++|+++++++++
T Consensus       671 m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~  750 (1887)
T 2uv8_A          671 VTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIE  750 (1887)
T ss_dssp             BCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHH
Confidence            4688999999999998 9999999999999999998 6877777777666633    26789999999999999999999


Q ss_pred             HHHHH-----cC-CCcEEEECCCCCCCCC-CcCCCC--HHHHHHHHHHHhHHHHHHHHHH--HhcccCC--CeEEEEcCc
Q 025259           82 KTVEK-----YG-RIDVFVLNAAVNPYAA-DLLKTK--ESVLDKLWEINVKSSILLMQDA--APHMQKG--SSVVFISSI  148 (255)
Q Consensus        82 ~~~~~-----~g-~~d~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~--~~iv~vss~  148 (255)
                      ++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++++  .|.|+++  ++||++||.
T Consensus       751 ~i~~~~~~~G~G~~LDiLVNNAGi~~-~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~  829 (1887)
T 2uv8_A          751 FIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPN  829 (1887)
T ss_dssp             HHHSCTTTTSCCCCCSEEEECCCCCC-CSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSC
T ss_pred             HHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcCh
Confidence            99988     66 9999999999875 55 788888  8999999999999999999998  6887643  699999999


Q ss_pred             CccCCCCCChhhHHhHHHHHHH-HHHHHHHhCCCcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCChHHHH
Q 025259          149 AGYQPPSAMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMA  226 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sKaa~~~l-~~~la~e~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va  226 (255)
                      .+..+  +...|++||+|+++| ++.++.++++.|+||+|+||+++ |+|.........   . ....+. +..+|+|+|
T Consensus       830 ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~---~-~~~~pl-r~~sPEEVA  902 (1887)
T 2uv8_A          830 HGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAE---G-IEKMGV-RTFSQKEMA  902 (1887)
T ss_dssp             TTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHH---H-HHTTSC-CCEEHHHHH
T ss_pred             HhccC--CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHH---H-HHhcCC-CCCCHHHHH
Confidence            98877  678899999999999 99999998878999999999999 788653211111   1 122343 566999999


Q ss_pred             HHHHHhcCCC-CCCccccEEeeC--CCccC
Q 025259          227 AAIAFLASDD-ASYITGETLVVA--GGMAS  253 (255)
Q Consensus       227 ~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  253 (255)
                      +.++||+++. ..+++|+.|.+|  ||+..
T Consensus       903 ~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          903 FNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             HHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             HHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            9999999987 689999999875  99753

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=7.1e-36  Score=293.52  Aligned_cols=239  Identities=18%  Similarity=0.202  Sum_probs=198.8

Q ss_pred             cccCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEe-CChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQG-IGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      .+++++|++|||||++| ||++++++|++.|++|++++ |+.+.+++..+++.+    .+.++.++.||++|++++++++
T Consensus       647 ~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv  726 (1878)
T 2uv9_A          647 GLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALV  726 (1878)
T ss_dssp             CBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHH
Confidence            34688999999999999 99999999999999999985 667676666655532    3678999999999999999999


Q ss_pred             HHHHHH---cC-CCcEEEECCCCCCCCC-CcCCCC--HHHHHHHHHHHhHHHHHHHHH--HHhcccCC--CeEEEEcCcC
Q 025259           81 DKTVEK---YG-RIDVFVLNAAVNPYAA-DLLKTK--ESVLDKLWEINVKSSILLMQD--AAPHMQKG--SSVVFISSIA  149 (255)
Q Consensus        81 ~~~~~~---~g-~~d~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~--~~~~l~~~--~~iv~vss~~  149 (255)
                      +++.+.   +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++.  +.+.|+++  ++||++||..
T Consensus       727 ~~i~~~~~~~G~~IDiLVnNAGi~~-~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~a  805 (1878)
T 2uv9_A          727 NYIYDTKNGLGWDLDYVVPFAAIPE-NGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNH  805 (1878)
T ss_dssp             HHHHCSSSSCCCCCSEEEECCCCCC-TTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCS
T ss_pred             HHHHHhhcccCCCCcEEEeCccccc-CCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchh
Confidence            999988   88 9999999999875 54 788888  899999999999999999987  66777543  6999999999


Q ss_pred             ccCCCCCChhhHHhHHHHHHHHHHHHHH-hCCCcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHH
Q 025259          150 GYQPPSAMAMYGVTKTALLGLTKALAAE-MAPDTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAA  227 (255)
Q Consensus       150 ~~~~~~~~~~y~~sKaa~~~l~~~la~e-~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~  227 (255)
                      +..+  +...|++||+++++|++.++.+ ++++|+||+|+||+++ |+|....    +.........+. +..+|+|+|+
T Consensus       806 g~~g--g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~----~~~~~~~~~~pl-r~~sPeEVA~  878 (1878)
T 2uv9_A          806 GTFG--NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN----NLVAEGVEKLGV-RTFSQQEMAF  878 (1878)
T ss_dssp             SSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH----HHTHHHHHTTTC-CCBCHHHHHH
T ss_pred             hccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc----hhhHHHHHhcCC-CCCCHHHHHH
Confidence            8877  4678999999999999887765 6667999999999999 9986431    111112223343 5569999999


Q ss_pred             HHHHhcCCCC-CCccccEEee--CCCccC
Q 025259          228 AIAFLASDDA-SYITGETLVV--AGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~-~~~~G~~i~~--dgG~~~  253 (255)
                      .++||+++.. .++||+.+.+  |||...
T Consensus       879 avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          879 NLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             HHHHHhCCcccccccCcEEEEEcCCCccc
Confidence            9999999876 8999999987  599764

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=1.4e-37  Score=297.79  Aligned_cols=239  Identities=20%  Similarity=0.213  Sum_probs=199.9

Q ss_pred             cccCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQG-IGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      .+++++|++|||||++| ||+++|++|+++|++|+++ +|+.+.+++..+++.+    .+.++.++.||++|++++++++
T Consensus       471 ~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLV  550 (1688)
T 2pff_A          471 XVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALI  550 (1688)
T ss_dssp             CCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHH
T ss_pred             ccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHH
Confidence            34688999999999998 9999999999999999988 6777777666666633    2568999999999999999999


Q ss_pred             HHHHHH-----cC-CCcEEEECCCCCCCCC-CcCCCC--HHHHHHHHHHHhHHHHHHHHHH--HhcccCC--CeEEEEcC
Q 025259           81 DKTVEK-----YG-RIDVFVLNAAVNPYAA-DLLKTK--ESVLDKLWEINVKSSILLMQDA--APHMQKG--SSVVFISS  147 (255)
Q Consensus        81 ~~~~~~-----~g-~~d~lv~~ag~~~~~~-~~~~~~--~~~~~~~~~~n~~~~~~~~~~~--~~~l~~~--~~iv~vss  147 (255)
                      +++.+.     +| ++|+||||||+.. .. ++.+.+  .++|++++++|+.+++.+++++  .|.|+++  ++||++||
T Consensus       551 e~I~e~~~~~GfG~~IDILVNNAGI~~-~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISS  629 (1688)
T 2pff_A          551 EFIYDTEKNGGLGWDLDAIIPFAAIPE-QGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSP  629 (1688)
T ss_dssp             HHHHSCTTSSSCCCCCCEEECCCCCCC-CSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCS
T ss_pred             HHHHHhccccccCCCCeEEEECCCcCC-CCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEC
Confidence            999988     77 8999999999875 55 788888  9999999999999999999999  7888644  68999999


Q ss_pred             cCccCCCCCChhhHHhHHHHHHH-HHHHHHHhCCCcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCChHHH
Q 025259          148 IAGYQPPSAMAMYGVTKTALLGL-TKALAAEMAPDTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNM  225 (255)
Q Consensus       148 ~~~~~~~~~~~~y~~sKaa~~~l-~~~la~e~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  225 (255)
                      ..+..+  +...|++||+|+++| .+.++.++++.|+||+|+||+++ |+|.....    .........+. +..+|+|+
T Consensus       630 iAG~~G--g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e----~~~~~l~~ipl-R~~sPEEV  702 (1688)
T 2pff_A          630 NHGTFG--GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN----IIAEGIEKMGV-RTFSQKEM  702 (1688)
T ss_dssp             CTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTT----TCSTTTSSSSC-CCCCCCTT
T ss_pred             hHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCch----HHHHHHHhCCC-CCCCHHHH
Confidence            988877  678899999999999 78888888778999999999999 78754310    00111222333 56699999


Q ss_pred             HHHHHHhcCCC-CCCccccEEeeC--CCccC
Q 025259          226 AAAIAFLASDD-ASYITGETLVVA--GGMAS  253 (255)
Q Consensus       226 a~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  253 (255)
                      |+.++||+++. ..+++|+.+.+|  ||...
T Consensus       703 A~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          703 AFNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             HHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             HHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            99999999988 689999999876  99753

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=5.4e-36  Score=246.64  Aligned_cols=217  Identities=28%  Similarity=0.349  Sum_probs=178.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+.++.             .+.+|++++++++++++++   .+++|+
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------~~~~D~~~~~~~~~~~~~~---~~~~d~   65 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA-------------DLSTPGGRETAVAAVLDRC---GGVLDG   65 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC-------------CTTSHHHHHHHHHHHHHHH---TTCCSE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc-------------cccCCcccHHHHHHHHHHc---CCCccE
Confidence            689999999999999999999999999999998754321             1678999999998888754   368999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCccCCC----------------
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGYQPP----------------  154 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~~~~----------------  154 (255)
                      ||||||....        .+.+++.+++|+.+++.+++++.+.|++.  ++||++||..++.+.                
T Consensus        66 vi~~Ag~~~~--------~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~  137 (255)
T 2dkn_A           66 LVCCAGVGVT--------AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEA  137 (255)
T ss_dssp             EEECCCCCTT--------SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHH
T ss_pred             EEECCCCCCc--------chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchh
Confidence            9999997531        12378999999999999999999998644  799999999887654                


Q ss_pred             ----------CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC-CCCCCCCh
Q 025259          155 ----------SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLGTT  222 (255)
Q Consensus       155 ----------~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  222 (255)
                                ++...|+.+|++++.+++.++.++.+ +|+++++.||++.|++.................. +.+++..+
T Consensus       138 ~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (255)
T 2dkn_A          138 RAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEP  217 (255)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCCTTSSCBCH
T ss_pred             hhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHHHhcCCCCH
Confidence                      56778999999999999999999876 9999999999999998765421111111111111 66789999


Q ss_pred             HHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          223 GNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       223 ~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+|+++++++++...+++|+++++|||...
T Consensus       218 ~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          218 REVAEAIAFLLGPQASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             HHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHHHHHHHHhCCCcccceeeEEEecCCeEe
Confidence            9999999999988777899999999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=1.5e-34  Score=231.10  Aligned_cols=200  Identities=17%  Similarity=0.218  Sum_probs=171.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+||||++++++|+++  +|++++|+++.+++..+++.   .  .++.+|++|++++++++++    ++++|+
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~---~--~~~~~D~~~~~~~~~~~~~----~~~id~   69 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVG---A--RALPADLADELEAKALLEE----AGPLDL   69 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHT---C--EECCCCTTSHHHHHHHHHH----HCSEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhcc---C--cEEEeeCCCHHHHHHHHHh----cCCCCE
Confidence            58999999999999999999998  99999999888777766553   2  7889999999999998887    689999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      +|||||... ..++.+.+.++|++.+++|+.+++.+++++..  .+.++||++||..++.+.++...|+++|++++.+++
T Consensus        70 vi~~ag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~  146 (207)
T 2yut_A           70 LVHAVGKAG-RASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLE  146 (207)
T ss_dssp             EEECCCCCC-CBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHH
T ss_pred             EEECCCcCC-CCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHH
Confidence            999999865 66788889999999999999999999999832  234799999999999998999999999999999999


Q ss_pred             HHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          173 ALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       173 ~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +++.|+++ +|++++|.||++.|++....            ..+..++.+|+|+|+.++++++....
T Consensus       147 ~~~~~~~~~gi~v~~v~pg~v~t~~~~~~------------~~~~~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          147 AARKELLREGVHLVLVRLPAVATGLWAPL------------GGPPKGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHTTTCEEEEECCCCBCSGGGGGG------------TSCCTTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHhhhCCEEEEEecCcccCCCcccc------------CCCCCCCCCHHHHHHHHHHHHhCCCC
Confidence            99999988 99999999999999984321            13457899999999999999976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=6.8e-33  Score=250.02  Aligned_cols=215  Identities=14%  Similarity=0.131  Sum_probs=183.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEE-eCC-------------hhHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVIS-SRK-------------QKNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~-~r~-------------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      .++++|||||++|||++++++|+++|+. |+++ +|+             .+.+++..+++++.+.++.++.||++|+++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5899999999999999999999999998 7777 898             355677888888889999999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccC
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQ  152 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~  152 (255)
                      ++++++++. +++++|+||||||+.. .+++.+.+.++|++++++|+.|++++.+++.+.+++   .++||++||..+..
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~-~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~  407 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVD-SEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIW  407 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCC-CCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcC
Confidence            999999998 7899999999999876 778999999999999999999999999999999864   57999999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      +.++...|+++|+++++|+    .++.. ||++++|+||+++|+|....    .....+...  .....+|+++++.+.+
T Consensus       408 g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~----~~~~~~~~~--g~~~l~pee~a~~l~~  477 (525)
T 3qp9_A          408 GGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG----ATGERLRRL--GLRPLAPATALTALDT  477 (525)
T ss_dssp             CCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS----HHHHHHHHT--TBCCBCHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch----hhHHHHHhc--CCCCCCHHHHHHHHHH
Confidence            9999999999999999885    45555 99999999999999987421    112222211  1246799999999999


Q ss_pred             hcCCCC
Q 025259          232 LASDDA  237 (255)
Q Consensus       232 l~s~~~  237 (255)
                      +++...
T Consensus       478 ~l~~~~  483 (525)
T 3qp9_A          478 ALGHGD  483 (525)
T ss_dssp             HHHHTC
T ss_pred             HHhCCC
Confidence            987654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=9.3e-33  Score=283.05  Aligned_cols=237  Identities=19%  Similarity=0.182  Sum_probs=183.1

Q ss_pred             cCCCCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQG-IGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         9 ~l~~k~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .|+||++|||||++| ||+++|+.|+++|++|++++|+.+.     ++++.+++...+.++..+.||+++++++++++++
T Consensus      2133 ~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D         2133 XXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp             CCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred             cCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHH
Confidence            489999999999999 9999999999999999999998776     6667777666677899999999999999999999


Q ss_pred             HHH----HcCCCcEEEECCCC----CCCCCCcCCCCHHHH----HHHHHHHhHHHHHHHHHHHhcccCCC-----e-EEE
Q 025259           83 TVE----KYGRIDVFVLNAAV----NPYAADLLKTKESVL----DKLWEINVKSSILLMQDAAPHMQKGS-----S-VVF  144 (255)
Q Consensus        83 ~~~----~~g~~d~lv~~ag~----~~~~~~~~~~~~~~~----~~~~~~n~~~~~~~~~~~~~~l~~~~-----~-iv~  144 (255)
                      +.+    .+|++|+||||||+    ........+.+.++|    +..+++|+.+++.+++++.+.|+..+     . |+.
T Consensus      2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D         2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp             HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred             HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence            998    88999999999997    221222233333444    45599999999999999999885221     2 333


Q ss_pred             EcCcCccCCCCCChhhHHhHHHHHHHHHHHHHH--hCCCcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCC
Q 025259          145 ISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE--MAPDTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGT  221 (255)
Q Consensus       145 vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e--~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (255)
                      .++..+.  .++...|++||+|+++|+++|+.|  ++++|+||++.||+++ |++.........    .....+. +..+
T Consensus      2293 ~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~----~~~~~~~-r~~~ 2365 (3089)
T 3zen_D         2293 GSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVS----AVEEAGV-TTYT 2365 (3089)
T ss_dssp             ECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHH----HHGGGSC-BCEE
T ss_pred             CCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHH----HHHhcCC-CCCC
Confidence            3433332  234568999999999999999999  7779999999999999 776543211111    1122333 3449


Q ss_pred             hHHHHHHHHHhcCCCCCC-ccccEEeeC--CCcc
Q 025259          222 TGNMAAAIAFLASDDASY-ITGETLVVA--GGMA  252 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~-~~G~~i~~d--gG~~  252 (255)
                      |+|||+.++||+|++..+ .+|+.+.+|  ||+.
T Consensus      2366 PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2366 TDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             HHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             HHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence            999999999999987655 556766666  9985

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=6.6e-31  Score=234.82  Aligned_cols=215  Identities=20%  Similarity=0.162  Sum_probs=178.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|||||++|||++++++|+++|+ .|++++|+.   +..++..+++++.+.++.++.||++|++++.++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            58999999999999999999999999 689999974   4567788888888999999999999999999999998766 


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +++|+||||||+.....++.+.+.++|++++++|+.+++++.+.+.+..  .++||++||..+..+.++...|+++|+++
T Consensus       318 g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~--~~~iV~~SS~a~~~g~~g~~~YaAaKa~l  395 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD--LDAFVLFSSGAAVWGSGGQPGYAAANAYL  395 (496)
T ss_dssp             SCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC--CSEEEEEEEHHHHTTCTTCHHHHHHHHHH
T ss_pred             CCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC--CCEEEEEeChHhcCCCCCcHHHHHHHHHH
Confidence            7899999999987337789999999999999999999999999998874  46999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +.|++.++..   ||++++|.||++.+........   ..+.+...  .....+|++.++.+.+++....
T Consensus       396 dala~~~~~~---Gi~v~sV~pG~w~~~gm~~~~~---~~~~l~~~--g~~~l~pe~~~~~l~~~l~~~~  457 (496)
T 3mje_A          396 DALAEHRRSL---GLTASSVAWGTWGEVGMATDPE---VHDRLVRQ--GVLAMEPEHALGALDQMLENDD  457 (496)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECEESSSCC---------CHHHHHT--TEEEECHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHhc---CCeEEEEECCcccCCccccChH---HHHHHHhc--CCCCCCHHHHHHHHHHHHcCCC
Confidence            9999877654   9999999999886653322111   11111111  1124589999999998886543

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.97  E-value=3.3e-30  Score=242.57  Aligned_cols=214  Identities=20%  Similarity=0.208  Sum_probs=175.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHH-HcCCe-EEEEeCC---hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLG-LEGAS-VVISSRK---QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~-~~G~~-Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+|++|||||++|||++++++|+ ++|++ |++++|+   .+..++..+++++.+.++.++.||++|+++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            48999999999999999999999 79995 9999999   5567888888988899999999999999999999999887


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      .+ ++|+||||||+.. ..++.+.+.++|++.+++|+.|++++.+++.|.|    +||++||..+..+.+++..|+++|+
T Consensus       609 ~~-~id~lVnnAGv~~-~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l----~iV~~SS~ag~~g~~g~~~YaAaka  682 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLD-DGVSESLTVERLDQVLRPKVDGARNLLELIDPDV----ALVLFSSVSGVLGSGGQGNYAAANS  682 (795)
T ss_dssp             TS-CEEEEEECCCCCC-CCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS----EEEEEEETHHHHTCSSCHHHHHHHH
T ss_pred             hC-CCEEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC----EEEEEccHHhcCCCCCCHHHHHHHH
Confidence            76 8999999999986 7889999999999999999999999999998877    8999999999999999999999997


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      .++.|++.++..   ||++|+|.||++.|++....... ...+.+. ..... ...+++....+...+...
T Consensus       683 ~~~alA~~~~~~---Gi~v~sI~pG~v~t~g~~~~~~~-~~~~~~~-~~g~~-~l~~~e~~~~~~~~l~~~  747 (795)
T 3slk_A          683 FLDALAQQRQSR---GLPTRSLAWGPWAEHGMASTLRE-AEQDRLA-RSGLL-PISTEEGLSQFDAACGGA  747 (795)
T ss_dssp             HHHHHHHHHHHT---TCCEEEEEECCCSCCCHHHHHHH-HHHHHHH-HTTBC-CCCHHHHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHc---CCeEEEEECCeECcchhhccccH-HHHHHHH-hcCCC-CCCHHHHHHHHHHHHhCC
Confidence            666665554443   99999999999998754332111 1112222 22222 456667666666555443

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.96  E-value=1e-28  Score=221.12  Aligned_cols=213  Identities=17%  Similarity=0.152  Sum_probs=176.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChh---HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQK---NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|||||+||||++++++|+++|+. |++++|+.+   ..++..++++..+.++.++.||++|++++.++++.+ ..
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            4789999999999999999999999996 999999875   466777788888889999999999999999999998 56


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++++|+||||||... ..++.+.+.+++++++++|+.|++++.+++.+.  +.++||++||..+..+.++...|+++|++
T Consensus       304 ~g~ld~VIh~AG~~~-~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~--~~~~~V~~SS~a~~~g~~g~~~Yaaaka~  380 (486)
T 2fr1_A          304 DVPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAY  380 (486)
T ss_dssp             TSCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHHH
T ss_pred             cCCCcEEEECCccCC-CCccccCCHHHHHHHHHHHHHHHHHHHHHhCcC--CCCEEEEEcChHhcCCCCCCHHHHHHHHH
Confidence            689999999999875 677889999999999999999999999998764  45799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccCh-hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      ++.|++.++..   |+++++|.||++.++ |....     .......  ......+|+++++.+..++....
T Consensus       381 l~~la~~~~~~---gi~v~~i~pG~~~~~gm~~~~-----~~~~~~~--~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          381 LDGLAQQRRSD---GLPATAVAWGTWAGSGMAEGP-----VADRFRR--HGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHT---TCCCEEEEECCBC-----------------CTT--TTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhc---CCeEEEEECCeeCCCcccchh-----HHHHHHh--cCCCCCCHHHHHHHHHHHHhCCC
Confidence            99998876654   899999999999876 43211     1111111  11236799999999999886543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.96  E-value=3.4e-28  Score=218.58  Aligned_cols=209  Identities=21%  Similarity=0.211  Sum_probs=175.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChh---HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQK---NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|||||+||||++++++|+++|+ +|++++|+.+   ..++..++++..+.++.++.||++|+++++++++.    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            478999999999999999999999999 5999999864   46677788888888999999999999999998886    


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                       +++|+||||||+.. ..++.+.+.+++++++++|+.+++++.+.+.+. ++.++||++||..+..+.++...|+++|++
T Consensus       334 -~~ld~VVh~AGv~~-~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~  410 (511)
T 2z5l_A          334 -YPPNAVFHTAGILD-DAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGTWGNAGQGAYAAANAA  410 (511)
T ss_dssp             -SCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGTTCCTTBHHHHHHHHH
T ss_pred             -CCCcEEEECCcccC-CcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhcCCCCCCHHHHHHHHH
Confidence             68999999999875 677889999999999999999999999887654 245799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcc-cChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFV-PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      ++.|++.++.+   |+++++|.||++ +|+|.....     .......  .....+|+++++.+...+...
T Consensus       411 ld~la~~~~~~---gi~v~sv~pG~~~~tgm~~~~~-----~~~~~~~--g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          411 LDALAERRRAA---GLPATSVAWGLWGGGGMAAGAG-----EESLSRR--GLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHTT---TCCCEEEEECCBCSTTCCCCHH-----HHHHHHH--TBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHc---CCcEEEEECCcccCCccccccc-----HHHHHhc--CCCCCCHHHHHHHHHHHHhCC
Confidence            99999876533   899999999998 777754321     1111111  124679999999999888653

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=2.2e-28  Score=199.39  Aligned_cols=205  Identities=20%  Similarity=0.198  Sum_probs=159.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeE-EEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV-IGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..+++++++|||||+|+||++++++|+++|++|++++|+++.+++...    .  ++ .++.+|++         +.+.+
T Consensus        16 ~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~--~~~~~~~~Dl~---------~~~~~   80 (236)
T 3e8x_A           16 NLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R--GASDIVVANLE---------EDFSH   80 (236)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T--TCSEEEECCTT---------SCCGG
T ss_pred             ccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C--CCceEEEcccH---------HHHHH
Confidence            457899999999999999999999999999999999999987765432    2  46 78899998         23334


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC---CCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP---SAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~---~~~~~y~~  162 (255)
                      .++++|+||||||... .        +++++.+++|+.+++.+++++...  ..++||++||..+..+.   ++...|+.
T Consensus        81 ~~~~~D~vi~~ag~~~-~--------~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~~Y~~  149 (236)
T 3e8x_A           81 AFASIDAVVFAAGSGP-H--------TGADKTILIDLWGAIKTIQEAEKR--GIKRFIMVSSVGTVDPDQGPMNMRHYLV  149 (236)
T ss_dssp             GGTTCSEEEECCCCCT-T--------SCHHHHHHTTTHHHHHHHHHHHHH--TCCEEEEECCTTCSCGGGSCGGGHHHHH
T ss_pred             HHcCCCEEEECCCCCC-C--------CCccccchhhHHHHHHHHHHHHHc--CCCEEEEEecCCCCCCCCChhhhhhHHH
Confidence            4568999999999753 1        347889999999999999999764  34699999998776654   46789999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +|++++.+++      ..+++++.|.||++.++.........      ........+..++|+|++++++++...  .+|
T Consensus       150 sK~~~e~~~~------~~gi~~~~lrpg~v~~~~~~~~~~~~------~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  215 (236)
T 3e8x_A          150 AKRLADDELK------RSSLDYTIVRPGPLSNEESTGKVTVS------PHFSEITRSITRHDVAKVIAELVDQQH--TIG  215 (236)
T ss_dssp             HHHHHHHHHH------HSSSEEEEEEECSEECSCCCSEEEEE------SSCSCCCCCEEHHHHHHHHHHHTTCGG--GTT
T ss_pred             HHHHHHHHHH------HCCCCEEEEeCCcccCCCCCCeEEec------cCCCcccCcEeHHHHHHHHHHHhcCcc--ccC
Confidence            9999999886      23899999999999988643321100      011123568899999999999997643  789


Q ss_pred             cEEeeCCCc
Q 025259          243 ETLVVAGGM  251 (255)
Q Consensus       243 ~~i~~dgG~  251 (255)
                      +++++++|.
T Consensus       216 ~~~~v~~~~  224 (236)
T 3e8x_A          216 KTFEVLNGD  224 (236)
T ss_dssp             EEEEEEECS
T ss_pred             CeEEEeCCC
Confidence            999998873

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=1e-27  Score=199.14  Aligned_cols=195  Identities=15%  Similarity=0.159  Sum_probs=154.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|++|||||+|+||++++++|+++|++|++++|++...+         +.++.++.+|++|+++++++++       ++
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~   65 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA---------GPNEECVQCDLADANAVNAMVA-------GC   65 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC---------CTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc---------CCCCEEEEcCCCCHHHHHHHHc-------CC
Confidence            3579999999999999999999999999999999875432         4578999999999999988877       69


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc------------CCCCCCh
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY------------QPPSAMA  158 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~------------~~~~~~~  158 (255)
                      |+||||||...         .+.|++.+++|+.+++.+++++.+.  ..++||++||..++            .+.++..
T Consensus        66 D~vi~~Ag~~~---------~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~  134 (267)
T 3rft_A           66 DGIVHLGGISV---------EKPFEQILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTIGYYPQTERLGPDVPARPDG  134 (267)
T ss_dssp             SEEEECCSCCS---------CCCHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCS
T ss_pred             CEEEECCCCcC---------cCCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCC
Confidence            99999999742         2347889999999999999999764  45699999998877            3445678


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      .|+.||++.+.+++.++.++  +++++.|.||.+.+++...    ...          ..+..++|+++.+..++..+. 
T Consensus       135 ~Y~~sK~~~e~~~~~~a~~~--g~~~~~vr~~~v~~~~~~~----~~~----------~~~~~~~d~a~~~~~~~~~~~-  197 (267)
T 3rft_A          135 LYGVSKCFGENLARMYFDKF--GQETALVRIGSCTPEPNNY----RML----------STWFSHDDFVSLIEAVFRAPV-  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CCCEEEEEECBCSSSCCST----THH----------HHBCCHHHHHHHHHHHHHCSC-
T ss_pred             hHHHHHHHHHHHHHHHHHHh--CCeEEEEEeecccCCCCCC----Cce----------eeEEcHHHHHHHHHHHHhCCC-
Confidence            89999999999999999888  6788888888877764321    111          124678899998888876542 


Q ss_pred             CccccEEeeCCC
Q 025259          239 YITGETLVVAGG  250 (255)
Q Consensus       239 ~~~G~~i~~dgG  250 (255)
                       ..+.++.+.++
T Consensus       198 -~~~~~~~~~s~  208 (267)
T 3rft_A          198 -LGCPVVWGASA  208 (267)
T ss_dssp             -CCSCEEEECCC
T ss_pred             -CCceEEEEeCC
Confidence             22344444433

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.95  E-value=5.2e-28  Score=205.52  Aligned_cols=227  Identities=16%  Similarity=0.122  Sum_probs=166.4

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |.-.+.....+.+++|||||+|+||++++++|+++|++|++++|+.+. +.    +     ++.++.+|++|++++++++
T Consensus         1 ~~~~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~----l-----~~~~~~~Dl~d~~~~~~~~   70 (321)
T 2pk3_A            1 MRGSHHHHHHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL----P-----NVEMISLDIMDSQRVKKVI   70 (321)
T ss_dssp             ------------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC----T-----TEEEEECCTTCHHHHHHHH
T ss_pred             CCCcccccccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc----c-----eeeEEECCCCCHHHHHHHH
Confidence            334556667789999999999999999999999999999999998754 21    1     5788999999999999888


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-------
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-------  153 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-------  153 (255)
                      +.     +++|+||||||... .    +.+.+++++.+++|+.++..+++++ +.+...++||++||...+.+       
T Consensus        71 ~~-----~~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~~~~~iv~~SS~~v~g~~~~~~~~  139 (321)
T 2pk3_A           71 SD-----IKPDYIFHLAAKSS-V----KDSWLNKKGTFSTNVFGTLHVLDAV-RDSNLDCRILTIGSSEEYGMILPEESP  139 (321)
T ss_dssp             HH-----HCCSEEEECCSCCC-H----HHHTTCHHHHHHHHHHHHHHHHHHH-HHHTCCCEEEEEEEGGGTBSCCGGGCS
T ss_pred             Hh-----cCCCEEEEcCcccc-h----hhhhhcHHHHHHHHHHHHHHHHHHH-HHhCCCCeEEEEccHHhcCCCCCCCCC
Confidence            75     37999999999753 1    1122357889999999999999999 44434579999999876543       


Q ss_pred             ------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhc---c-----------
Q 025259          154 ------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEG---K-----------  213 (255)
Q Consensus       154 ------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~---~-----------  213 (255)
                            .++...|+.+|++.+.+++.++.++  +++++.+.|+++.++..........+......   .           
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  217 (321)
T 2pk3_A          140 VSEENQLRPMSPYGVSKASVGMLARQYVKAY--GMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNL  217 (321)
T ss_dssp             BCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCS
T ss_pred             CCCCCCCCCCCccHHHHHHHHHHHHHHHHHc--CCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCC
Confidence                  2456789999999999999999886  89999999999988764321001112222111   1           


Q ss_pred             CCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          214 TLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       214 ~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+...+..++|+|+++++++...   .+|+++++++|...
T Consensus       218 ~~~~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          218 EAVRDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             SCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             CcEEeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            11234678999999999998654   46899999998653

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.95  E-value=9.8e-27  Score=199.00  Aligned_cols=229  Identities=14%  Similarity=0.067  Sum_probs=173.1

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEE-EecCCCHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGI-ICHVSNEQHRKNLID   81 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~-~~D~~~~~~~~~~~~   81 (255)
                      ..|...++++++|||||+|+||++++++|+++|++|++++|+.+..+.+.+.+... +.++.++ .+|++++++++++++
T Consensus         3 ~~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~   82 (342)
T 1y1p_A            3 IDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK   82 (342)
T ss_dssp             STTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT
T ss_pred             CCcccCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc
Confidence            44556688999999999999999999999999999999999988776666555432 3568888 799999988777654


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-CC------
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-PP------  154 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-~~------  154 (255)
                             ++|+||||||... ..       +++++.+++|+.++..+++++.+.. ..++||++||..++. +.      
T Consensus        83 -------~~d~vih~A~~~~-~~-------~~~~~~~~~n~~g~~~ll~~~~~~~-~~~~iv~~SS~~~~~~~~~~~~~~  146 (342)
T 1y1p_A           83 -------GAAGVAHIASVVS-FS-------NKYDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNVEGI  146 (342)
T ss_dssp             -------TCSEEEECCCCCS-CC-------SCHHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTCCCC
T ss_pred             -------CCCEEEEeCCCCC-CC-------CCHHHHHHHHHHHHHHHHHHHHhCC-CCcEEEEeccHHHhcCCCCCCCCc
Confidence                   6999999999754 11       2356789999999999999998632 346999999987752 21      


Q ss_pred             ------------------------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHH
Q 025259          155 ------------------------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVR  207 (255)
Q Consensus       155 ------------------------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~  207 (255)
                                              .+...|+.+|++.+.+++.++.+++++++++.+.||++.++........   ..+.
T Consensus       147 ~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~  226 (342)
T 1y1p_A          147 YLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWM  226 (342)
T ss_dssp             EECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHH
T ss_pred             ccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHH
Confidence                                    1235799999999999999999987789999999999998865432111   1122


Q ss_pred             HHhhcc--------CCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          208 KALEGK--------TLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       208 ~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ......        .....+..++|+|++++.++..  ...+|+.+..+|+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~  275 (342)
T 1y1p_A          227 MSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAG  275 (342)
T ss_dssp             HHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCE
T ss_pred             HHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCC
Confidence            222111        1234578899999999998864  2356776666654

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.95  E-value=4.1e-28  Score=198.26  Aligned_cols=198  Identities=11%  Similarity=0.060  Sum_probs=153.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++|++|||||+|+||++++++|+++|+  +|++++|+++.++...      ..++.++.+|++|+++++++++     
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~-----   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA------YKNVNQEVVDFEKLDDYASAFQ-----   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG------GGGCEEEECCGGGGGGGGGGGS-----
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc------cCCceEEecCcCCHHHHHHHhc-----
Confidence            46789999999999999999999999999  9999999876543211      1246788999999988877665     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                        ++|++|||||... .       .+++++.+++|+.+++.+++++.+.  ..++||++||..++.+  +...|+.+|++
T Consensus        84 --~~d~vi~~ag~~~-~-------~~~~~~~~~~n~~~~~~~~~~~~~~--~~~~iv~~SS~~~~~~--~~~~Y~~sK~~  149 (242)
T 2bka_A           84 --GHDVGFCCLGTTR-G-------KAGAEGFVRVDRDYVLKSAELAKAG--GCKHFNLLSSKGADKS--SNFLYLQVKGE  149 (242)
T ss_dssp             --SCSEEEECCCCCH-H-------HHHHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHH
T ss_pred             --CCCEEEECCCccc-c-------cCCcccceeeeHHHHHHHHHHHHHC--CCCEEEEEccCcCCCC--CcchHHHHHHH
Confidence              7999999999642 1       2457889999999999999988764  3469999999887653  45689999999


Q ss_pred             HHHHHHHHHHHhCCCc-EEEEEeCCcccChhhhhhcCCHHHHHHhhccCC----CCCCCChHHHHHHHHHhcCCCCC
Q 025259          167 LLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL----LNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ++.+++.+      ++ +++.|.||++.+++..... ............|    .+++..++|+|+++++++++...
T Consensus       150 ~e~~~~~~------~~~~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~~  219 (242)
T 2bka_A          150 VEAKVEEL------KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRD  219 (242)
T ss_dssp             HHHHHHTT------CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCCC
T ss_pred             HHHHHHhc------CCCCeEEEcCceecCCCCCCcH-HHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCccc
Confidence            99998753      45 8999999999998653211 1122222223333    45678999999999999987654

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.95  E-value=1.8e-26  Score=197.79  Aligned_cols=224  Identities=15%  Similarity=0.086  Sum_probs=169.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++|||||+|+||++++++|++.|++|++++|+. +..+...+.+... .++.++.+|++|+++++++++..     ++|
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~-~~~~~~~~Dl~d~~~~~~~~~~~-----~~d   75 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKY-----MPD   75 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC-CceEEEEcCCCCHHHHHHHHhcc-----CCC
Confidence            5799999999999999999999999999999853 3333333444433 36788999999999999888752     699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-------------------
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-------------------  152 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-------------------  152 (255)
                      +||||||... .    +.+.+++++.+++|+.++..+++++.+... .++||++||...+.                   
T Consensus        76 ~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~  149 (347)
T 1orr_A           76 SCFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQYNS-NCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  149 (347)
T ss_dssp             EEEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             EEEECCcccC-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CceEEEeccHHHhCCCCcCCccccccccccccc
Confidence            9999999643 1    123456788999999999999999998763 36899999976542                   


Q ss_pred             --------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHH-hhccC----CC
Q 025259          153 --------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKA-LEGKT----LL  216 (255)
Q Consensus       153 --------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~-~~~~~----~~  216 (255)
                              +.++...|+.+|++.+.+++.++.++  +++++.+.||++.++........   ..+... .....    +.
T Consensus       150 ~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (347)
T 1orr_A          150 PNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF--GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF  227 (347)
T ss_dssp             TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred             ccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCe
Confidence                    23456789999999999999999887  89999999999999864321111   111111 11110    21


Q ss_pred             ---------CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          217 ---------NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       217 ---------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                               ..+..++|+|+++++++.. ....+|++++++||.
T Consensus       228 ~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          228 TISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             EEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             EEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence                     1266899999999999863 235789999999985

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=1.8e-26  Score=198.40  Aligned_cols=221  Identities=15%  Similarity=0.119  Sum_probs=171.2

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHc-CC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLE-GA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .+...+++|++|||||+|+||++++++|++. |+ .|++++|+++..+.+.+++.  ..++.++.+|++|.+++.++++ 
T Consensus        14 ~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~--~~~v~~~~~Dl~d~~~l~~~~~-   90 (344)
T 2gn4_A           14 NHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN--DPRMRFFIGDVRDLERLNYALE-   90 (344)
T ss_dssp             --CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC--CTTEEEEECCTTCHHHHHHHTT-
T ss_pred             cHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc--CCCEEEEECCCCCHHHHHHHHh-
Confidence            3444578999999999999999999999999 98 89999999887776665553  3468899999999998887765 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                            ++|+|||+||... . +   .......+.+++|+.++..+++++.+..  .++||++||..+..|   ...|+.
T Consensus        91 ------~~D~Vih~Aa~~~-~-~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~~--v~~~V~~SS~~~~~p---~~~Y~~  154 (344)
T 2gn4_A           91 ------GVDICIHAAALKH-V-P---IAEYNPLECIKTNIMGASNVINACLKNA--ISQVIALSTDKAANP---INLYGA  154 (344)
T ss_dssp             ------TCSEEEECCCCCC-H-H---HHHHSHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSSC---CSHHHH
T ss_pred             ------cCCEEEECCCCCC-C-C---chhcCHHHHHHHHHHHHHHHHHHHHhCC--CCEEEEecCCccCCC---ccHHHH
Confidence                  6999999999743 1 1   1223456889999999999999999863  469999999876544   568999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC---------CCCCCCChHHHHHHHHHh
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT---------LLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~~~~~l  232 (255)
                      +|++.+.++++++.++++ +++++++.||.+.++.....   +.+........         ....+..++|+|++++++
T Consensus       155 sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i---~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~  231 (344)
T 2gn4_A          155 TKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVV---PFFKKLVQNKASEIPITDIRMTRFWITLDEGVSFVLKS  231 (344)
T ss_dssp             HHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHH---HHHHHHHHHTCCCEEESCTTCEEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHH---HHHHHHHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHH
Confidence            999999999999998877 89999999999998642111   12222221111         112367889999999999


Q ss_pred             cCCCCCCccccEEeeCCC
Q 025259          233 ASDDASYITGETLVVAGG  250 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG  250 (255)
                      +...   ..|+++.++++
T Consensus       232 l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          232 LKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHC---CSSCEEEECCC
T ss_pred             Hhhc---cCCCEEecCCC
Confidence            8653   36889988876

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.94  E-value=3.8e-26  Score=195.58  Aligned_cols=230  Identities=20%  Similarity=0.145  Sum_probs=171.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++++|||||+|+||++++++|+++|++|++++|+.+..++..+.+... +.++.++.+|++|+++++++++.     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            4679999999999999999999999999999999877666665555443 55788899999999999988876     47


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCCh
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMA  158 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~  158 (255)
                      +|+||||||... ..    ...+...+.+++|+.+++.+++++...  ..++||++||...+.           +..+..
T Consensus        79 ~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~  151 (341)
T 3enk_A           79 ITAAIHFAALKA-VG----ESVAKPIEYYRNNLDSLLSLLRVMRER--AVKRIVFSSSATVYGVPERSPIDETFPLSATN  151 (341)
T ss_dssp             CCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSS
T ss_pred             CcEEEECccccc-cC----ccccChHHHHHHHHHHHHHHHHHHHhC--CCCEEEEEecceEecCCCCCCCCCCCCCCCCC
Confidence            999999999753 11    123445678999999999999988764  346999999977652           223457


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-------C---HHHHHHhhcc-CC------------
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-------N---DAVRKALEGK-TL------------  215 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-------~---~~~~~~~~~~-~~------------  215 (255)
                      .|+.+|++.+.+++.++.++. ++++..+.|+.+.++.....+.       .   +.+....... .+            
T Consensus       152 ~Y~~sK~~~e~~~~~~~~~~~-~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  230 (341)
T 3enk_A          152 PYGQTKLMAEQILRDVEAADP-SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPD  230 (341)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTT
T ss_pred             hhHHHHHHHHHHHHHHhhcCC-CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCC
Confidence            899999999999999999864 5899999999888764311110       0   1122222211 11            


Q ss_pred             ---CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          216 ---LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       216 ---~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                         ...+...+|+|+++++++........|+++++.+|...
T Consensus       231 g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          231 GTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             CCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence               12356679999999998865323356899999988754

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.94  E-value=2e-26  Score=196.95  Aligned_cols=222  Identities=14%  Similarity=0.006  Sum_probs=165.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|||||+|+||++++++|+++|  ++|++++|+..  ..+.. +++. .+.++.++.+|++|++++++++.      
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~------   74 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL-KDLE-DDPRYTFVKGDVADYELVKELVR------   74 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHH------
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH-hhhc-cCCceEEEEcCCCCHHHHHHHhh------
Confidence            4579999999999999999999997  88999998642  11111 1111 13468899999999999888773      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSA  156 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~  156 (255)
                       ++|+||||||...     .+.+.+++++.+++|+.++..+++++.+. ...++||++||...+.           +.++
T Consensus        75 -~~d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~  147 (336)
T 2hun_A           75 -KVDGVVHLAAESH-----VDRSISSPEIFLHSNVIGTYTLLESIRRE-NPEVRFVHVSTDEVYGDILKGSFTENDRLMP  147 (336)
T ss_dssp             -TCSEEEECCCCCC-----HHHHHHCTHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred             -CCCEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence             7999999999743     11234567889999999999999999987 2246999999976432           3455


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC---------CCCCCCChHHHHH
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT---------LLNRLGTTGNMAA  227 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~va~  227 (255)
                      ...|+.+|++.+.+++.++.++  +++++.+.|+.+.++........+.+........         ....+..++|+|+
T Consensus       148 ~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~  225 (336)
T 2hun_A          148 SSPYSATKAASDMLVLGWTRTY--NLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR  225 (336)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHT--TCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred             CCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence            6789999999999999999887  7999999999999886421100112222222211         1234677899999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++++++..   .+|++++++||...
T Consensus       226 ~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          226 AIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHhCC---CCCCEEEeCCCCcc
Confidence            999998643   47999999998753

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.94  E-value=5.6e-26  Score=195.59  Aligned_cols=228  Identities=15%  Similarity=0.005  Sum_probs=171.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh----HHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK----NVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~----~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +++++++|||||+|+||++++++|++.|++|++++|+..    .++...+++... +.++.++.+|+++++++.++++  
T Consensus        24 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--  101 (352)
T 1sb8_A           24 PAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA--  101 (352)
T ss_dssp             HHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT--
T ss_pred             CccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc--
Confidence            467899999999999999999999999999999999754    233333222111 2468889999999998887776  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC--------
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS--------  155 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~--------  155 (255)
                           ++|+|||+||... ..    .+.+++++.+++|+.++..+++++.+.  ..++||++||...+.+.+        
T Consensus       102 -----~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~E~~  169 (352)
T 1sb8_A          102 -----GVDYVLHQAALGS-VP----RSINDPITSNATNIDGFLNMLIAARDA--KVQSFTYAASSSTYGDHPGLPKVEDT  169 (352)
T ss_dssp             -----TCSEEEECCSCCC-HH----HHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGTTCCCSSBCTTC
T ss_pred             -----CCCEEEECCcccC-ch----hhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHhcCCCCCCCCCCCC
Confidence                 7999999999743 11    134568889999999999999999875  346899999988764432        


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh--cC--CHHHHHHhhccCC---------CCCC
Q 025259          156 ---AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL--LG--NDAVRKALEGKTL---------LNRL  219 (255)
Q Consensus       156 ---~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~--~~--~~~~~~~~~~~~~---------~~~~  219 (255)
                         +...|+.+|++.+.+++.++.++  +++++.+.||++.++.....  ..  ...+........+         ...+
T Consensus       170 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~  247 (352)
T 1sb8_A          170 IGKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDF  247 (352)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECC
T ss_pred             CCCCCChhHHHHHHHHHHHHHHHHHc--CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEee
Confidence               46789999999999999999887  79999999999998764321  00  1122222222211         1246


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..++|+|+++++++... ....|+++++.+|...
T Consensus       248 i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  280 (352)
T 1sb8_A          248 CYIENTVQANLLAATAG-LDARNQVYNIAVGGRT  280 (352)
T ss_dssp             EEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             EEHHHHHHHHHHHHhcc-ccCCCceEEeCCCCCc
Confidence            78899999999888652 3467899999988653

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.94  E-value=1.2e-25  Score=191.78  Aligned_cols=242  Identities=14%  Similarity=0.055  Sum_probs=182.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHH-HcCCeEEEEeCChhH------------HHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLG-LEGASVVISSRKQKN------------VDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~-~~G~~Vv~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      .+.+|++|||||++|||++++..|+ +.|+.|+++.+..+.            ...+.+.+++.|.+...+.||++++++
T Consensus        47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~  126 (401)
T 4ggo_A           47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEI  126 (401)
T ss_dssp             SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHH
T ss_pred             cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHH
Confidence            4578999999999999999999999 689999998876532            345667778889999999999999999


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCC------------CC---------------------cCCCCHHHHHHHHHH--
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYA------------AD---------------------LLKTKESVLDKLWEI--  120 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~------------~~---------------------~~~~~~~~~~~~~~~--  120 (255)
                      ++++++++.+++|++|+||||++.....            +|                     +...+.++++.+..+  
T Consensus       127 i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg  206 (401)
T 4ggo_A          127 KAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMG  206 (401)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHh
Confidence            9999999999999999999999965210            11                     134567777766655  


Q ss_pred             -HhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC--CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhh
Q 025259          121 -NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP--PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       121 -n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~--~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~  197 (255)
                       ..++.|...+...+.|.++++++.+|+..+...  ..+...++++|++|+..++.|+.++++ ++++++.||.+.|...
T Consensus       207 ~s~~s~w~~al~~a~lla~G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~~-~~a~v~v~~a~vT~As  285 (401)
T 4ggo_A          207 GEDWERWIKQLSKEGLLEEGCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENPS-IRAFVSVNKGLVTRAS  285 (401)
T ss_dssp             SHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCTT-EEEEEEECCCCCCTTG
T ss_pred             hhHHHHHHHHHHhhhcccCCceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcCC-CcEEEEEcCccccchh
Confidence             556666777777788988999999999887643  334567899999999999999999986 8999999999999987


Q ss_pred             hhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          198 QALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ..++.-+.-...+.+  -++..++.|.+.+.+..|+.+. -|-++..+.+|+..-+|
T Consensus       286 saIP~~ply~~~l~k--vmk~~g~heg~ieq~~rl~~~~-ly~~~~~~~~D~~~r~r  339 (401)
T 4ggo_A          286 AVIPVIPLYLASLFK--VMKEKGNHEGCIEQITRLYAER-LYRKDGTIPVDEENRIR  339 (401)
T ss_dssp             GGSSSHHHHHHHHHH--HHHHHTCCCCHHHHHHHHHHHT-TSCTTCCCCCCTTSCEE
T ss_pred             hcCCCchHHHHHHHH--HHHhcCCCCchHHHHHHHHHHh-hccCCCCCCcCCCCCcc
Confidence            766543321111111  1233456677888888888542 22233344566644333

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.94  E-value=8.9e-26  Score=193.25  Aligned_cols=223  Identities=16%  Similarity=0.056  Sum_probs=164.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++++|||||+|+||++++++|+++|++|++++|+.+..+.  ..++..  +.++.++.+|++|++++.++++.+     
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----   74 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----   74 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhccccCceeEEECCCCCHHHHHHHHHhc-----
Confidence            57899999999999999999999999999999998765322  122222  246888999999999999988865     


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----------CCCCCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------QPPSAM  157 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----------~~~~~~  157 (255)
                      ++|+||||||... .    +.+.+++++.+++|+.+++.+++++.+. ...++||++||...+           .+.++.
T Consensus        75 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~  148 (345)
T 2z1m_A           75 QPDEVYNLAAQSF-V----GVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR  148 (345)
T ss_dssp             CCSEEEECCCCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             CCCEEEECCCCcc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEEEechhhcCCCCCCCCCccCCCCCC
Confidence            7999999999743 1    1123457889999999999999999864 223699999998643           234566


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC---C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc--------CC-CCCCCChHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMA---P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK--------TL-LNRLGTTGN  224 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~---~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~  224 (255)
                      ..|+.+|++.+.+++.++.+++   . .++++.+.||...+.+.....  ..........        .+ ...+..++|
T Consensus       149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D  226 (345)
T 2z1m_A          149 SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT--YSLARIKYGLQDKLVLGNLNAKRDWGYAPE  226 (345)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH--HHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH--HHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence            7899999999999999999976   3 457788889988776533210  0111111111        01 123788999


Q ss_pred             HHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          225 MAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       225 va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +|+++.++++...    ++++++.+|..
T Consensus       227 va~a~~~~~~~~~----~~~~~i~~~~~  250 (345)
T 2z1m_A          227 YVEAMWLMMQQPE----PDDYVIATGET  250 (345)
T ss_dssp             HHHHHHHHHTSSS----CCCEEECCSCC
T ss_pred             HHHHHHHHHhCCC----CceEEEeCCCC
Confidence            9999999997543    36788877754

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.94  E-value=6.9e-26  Score=193.50  Aligned_cols=217  Identities=16%  Similarity=0.162  Sum_probs=161.3

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..++++++++|||||+|+||++++++|++.|++|++++|+.+...+..+.+    .++.++.+|++|+++++++++++ 
T Consensus        13 ~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l----~~v~~~~~Dl~d~~~~~~~~~~~-   87 (330)
T 2pzm_A           13 GLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV----AGLSVIEGSVTDAGLLERAFDSF-   87 (330)
T ss_dssp             -CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC----TTEEEEECCTTCHHHHHHHHHHH-
T ss_pred             CCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc----CCceEEEeeCCCHHHHHHHHhhc-
Confidence            4446788999999999999999999999999999999999754322111111    36888999999999999888865 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----C----
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----S----  155 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----~----  155 (255)
                          ++|+||||||... ..     +.++++  +++|+.+++.+++++...  ..++||++||...+.+.     +    
T Consensus        88 ----~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~~~~~~~~~~~~E~  153 (330)
T 2pzm_A           88 ----KPTHVVHSAAAYK-DP-----DDWAED--AATNVQGSINVAKAASKA--GVKRLLNFQTALCYGRPATVPIPIDSP  153 (330)
T ss_dssp             ----CCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHHH--TCSEEEEEEEGGGGCSCSSSSBCTTCC
T ss_pred             ----CCCEEEECCccCC-Cc-----cccChh--HHHHHHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCccCCCCcCCC
Confidence                7999999999754 21     345565  999999999999999864  34699999998776543     2    


Q ss_pred             --CChhhHHhHHHHHHHHHHHHHHhCC-CcE-EEEEeCCcccChhhhhhcCCHHHHHHhh-ccCC-----CCCCCChHHH
Q 025259          156 --AMAMYGVTKTALLGLTKALAAEMAP-DTR-VNCVAPGFVPTHFAQALLGNDAVRKALE-GKTL-----LNRLGTTGNM  225 (255)
Q Consensus       156 --~~~~y~~sKaa~~~l~~~la~e~~~-~i~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~v  225 (255)
                        +...|+.+|++.+.+++.+  ++.. .+| ++.+.||. .+++....      ..... ....     ...+..++|+
T Consensus       154 ~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~Dv  224 (330)
T 2pzm_A          154 TAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTF------YKRLKAGQKCFCSDTVRDFLDMSDF  224 (330)
T ss_dssp             CCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHH------HHHHHTTCCCCEESCEECEEEHHHH
T ss_pred             CCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHH------HHHHHcCCEEeCCCCEecceeHHHH
Confidence              5678999999999999887  4443 566 66777775 34432211      11111 1110     3457889999


Q ss_pred             HH-HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          226 AA-AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       226 a~-~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+ +++++++...    |+++++++|...
T Consensus       225 a~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          225 LAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             HHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             HHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            99 9999997632    899999998653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.94  E-value=2.5e-26  Score=198.22  Aligned_cols=223  Identities=13%  Similarity=0.031  Sum_probs=167.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChh--HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-GASVVISSRKQK--NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++|||||+|+||++++++|++. |++|++++|+..  ..+.+ +++. .+.++.++.+|++|++++.+++++.     ++
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   74 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESL-SDIS-ESNRYNFEHADICDSAEITRIFEQY-----QP   74 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGG-TTTT-TCTTEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhh-hhhh-cCCCeEEEECCCCCHHHHHHHHhhc-----CC
Confidence            5999999999999999999998 799999998642  22221 1111 1346889999999999999888752     79


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-------CeEEEEcCcCccC-----------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-------SSVVFISSIAGYQ-----------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-------~~iv~vss~~~~~-----------  152 (255)
                      |+||||||...     .+.+.+++++.+++|+.+++.+++++.+.|+..       ++||++||...+.           
T Consensus        75 d~vih~A~~~~-----~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~  149 (361)
T 1kew_A           75 DAVMHLAAESH-----VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENS  149 (361)
T ss_dssp             SEEEECCSCCC-----HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTT
T ss_pred             CEEEECCCCcC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccccccc
Confidence            99999999743     122345678899999999999999999986432       4999999975432           


Q ss_pred             ----------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC--------
Q 025259          153 ----------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT--------  214 (255)
Q Consensus       153 ----------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~--------  214 (255)
                                +.++...|+.+|++.+.+++.++.++  +++++.+.||.+.++..........+........        
T Consensus       150 ~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (361)
T 1kew_A          150 VTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKG  227 (361)
T ss_dssp             SCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTS
T ss_pred             ccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcCCC
Confidence                      23456789999999999999999887  7999999999999986432100112222222111        


Q ss_pred             -CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          215 -LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       215 -~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       ....+..++|+|++++++++..   .+|++++++||...
T Consensus       228 ~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~~  264 (361)
T 1kew_A          228 DQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNEK  264 (361)
T ss_dssp             CCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             ceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCee
Confidence             1234678999999999998653   47999999998753

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.93  E-value=1.3e-25  Score=192.64  Aligned_cols=231  Identities=12%  Similarity=0.031  Sum_probs=162.3

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~   79 (255)
                      .|+++.+++++||||||+|+||++++++|++.|  +.|+..+|......  ...++..  ..++.++.+|++|++++.++
T Consensus        16 ~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~   93 (346)
T 4egb_A           16 ENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN--LNNVKSIQDHPNYYFVKGEIQNGELLEHV   93 (346)
T ss_dssp             --------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC--GGGGTTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred             cccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc--hhhhhhhccCCCeEEEEcCCCCHHHHHHH
Confidence            456667789999999999999999999999999  66777777642110  0111111  24789999999999999998


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----  154 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----  154 (255)
                      ++..     ++|+|||+|+... .    ..+.+++++.+++|+.++..+++++.+.  ...++|++||...+...     
T Consensus        94 ~~~~-----~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~v~~SS~~vy~~~~~~~~  161 (346)
T 4egb_A           94 IKER-----DVQVIVNFAAESH-V----DRSIENPIPFYDTNVIGTVTLLELVKKY--PHIKLVQVSTDEVYGSLGKTGR  161 (346)
T ss_dssp             HHHH-----TCCEEEECCCCC--------------CHHHHHHTHHHHHHHHHHHHS--TTSEEEEEEEGGGGCCCCSSCC
T ss_pred             Hhhc-----CCCEEEECCcccc-h----hhhhhCHHHHHHHHHHHHHHHHHHHHhc--CCCEEEEeCchHHhCCCCcCCC
Confidence            8863     6999999999754 1    2245667889999999999999999876  34589999998665432     


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC---------CC
Q 025259          155 -------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL---------NR  218 (255)
Q Consensus       155 -------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~  218 (255)
                             .+...|+.+|.+.+.+++.++.+.  +++++.+.|+++.++..........+........+.         ..
T Consensus       162 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (346)
T 4egb_A          162 FTEETPLAPNSPYSSSKASADMIALAYYKTY--QLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRD  239 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEEC
T ss_pred             cCCCCCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEe
Confidence                   234789999999999999999887  789999999999887542211112223333222221         12


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +..++|+|+++++++....   .|+++++.+|...
T Consensus       240 ~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~~  271 (346)
T 4egb_A          240 WLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNEK  271 (346)
T ss_dssp             EEEHHHHHHHHHHHHHHCC---TTCEEEECCSCCE
T ss_pred             eEEHHHHHHHHHHHHhcCC---CCCEEEECCCCce
Confidence            4568999999999987643   7899999998753

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.93  E-value=3.2e-25  Score=178.84  Aligned_cols=190  Identities=10%  Similarity=0.026  Sum_probs=142.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHH-HcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLG-LEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~-~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      |+++||||+|+||++++++|+ +.|++|++++|+++ .++++.    ..+.++.++.+|++|+++++++++       ++
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~~~~~~~~-------~~   74 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPGXLEQAVT-------NA   74 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHHHHHHHHc-------CC
Confidence            689999999999999999999 89999999999987 554432    345678999999999999888876       68


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh----------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA----------  158 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~----------  158 (255)
                      |+||||+|..                    |+.     .+.+++.++  ..++||++||..++.+.+...          
T Consensus        75 d~vv~~ag~~--------------------n~~-----~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~  129 (221)
T 3r6d_A           75 EVVFVGAMES--------------------GSD-----MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPI  129 (221)
T ss_dssp             SEEEESCCCC--------------------HHH-----HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCH
T ss_pred             CEEEEcCCCC--------------------Chh-----HHHHHHHHHhcCCCeEEEEeeceecCCCCccccccccccccc
Confidence            9999999952                    222     556666554  336899999998887655444          


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc--CCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA--SDD  236 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--s~~  236 (255)
                      .|+.+|.+++.+.+.      .+++++.|.||++.++.....+...     .......+...+++|+|+++++++  ++.
T Consensus       130 ~y~~~K~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~dvA~~~~~l~~~~~~  198 (221)
T 3r6d_A          130 SYVQGERQARNVLRE------SNLNYTILRLTWLYNDPEXTDYELI-----PEGAQFNDAQVSREAVVKAIFDILHAADE  198 (221)
T ss_dssp             HHHHHHHHHHHHHHH------SCSEEEEEEECEEECCTTCCCCEEE-----CTTSCCCCCEEEHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHHHHHHHHHHh------CCCCEEEEechhhcCCCCCcceeec-----cCCccCCCceeeHHHHHHHHHHHHHhcCh
Confidence            899999999988763      3899999999999887322111000     001112234788999999999999  887


Q ss_pred             CCCccccEEeeCC
Q 025259          237 ASYITGETLVVAG  249 (255)
Q Consensus       237 ~~~~~G~~i~~dg  249 (255)
                      ..++++.+...+.
T Consensus       199 ~~~~~~~~~i~~~  211 (221)
T 3r6d_A          199 TPFHRTSIGVGEP  211 (221)
T ss_dssp             GGGTTEEEEEECT
T ss_pred             hhhhcceeeecCC
Confidence            7666655544443

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.93  E-value=5.6e-25  Score=189.09  Aligned_cols=229  Identities=14%  Similarity=0.018  Sum_probs=173.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-----CeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-----IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.+++++||||||+|+||++++++|+++|+.|++++|+..........+....     .++.++.+|++|++++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            34578999999999999999999999999999999997665444444444321     478999999999998887776 


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC--------
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP--------  154 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~--------  154 (255)
                            ++|+|||+||... .    ..+.+++.+.+++|+.++..+++++...-  ..++|++||...+...        
T Consensus       100 ------~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~  166 (351)
T 3ruf_A          100 ------GVDHVLHQAALGS-V----PRSIVDPITTNATNITGFLNILHAAKNAQ--VQSFTYAASSSTYGDHPALPKVEE  166 (351)
T ss_dssp             ------TCSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTT
T ss_pred             ------CCCEEEECCccCC-c----chhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEecHHhcCCCCCCCCccC
Confidence                  7999999999643 1    22345577889999999999999998753  3589999998776432        


Q ss_pred             ---CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCC---------CC
Q 025259          155 ---SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLL---------NR  218 (255)
Q Consensus       155 ---~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~---------~~  218 (255)
                         .+...|+.+|.+.+.+++.++.+.  ++++..+.|+.+.++.......    ...+........+.         ..
T Consensus       167 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~  244 (351)
T 3ruf_A          167 NIGNPLSPYAVTKYVNEIYAQVYARTY--GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRD  244 (351)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEEC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEe
Confidence               235789999999999999999887  7899999999998875332110    02222222222211         23


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+|+|++++.++... ....|+++++.+|...
T Consensus       245 ~i~v~Dva~a~~~~~~~~-~~~~~~~~ni~~~~~~  278 (351)
T 3ruf_A          245 FCYIDNVIQMNILSALAK-DSAKDNIYNVAVGDRT  278 (351)
T ss_dssp             CEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSCCE
T ss_pred             eEEHHHHHHHHHHHHhhc-cccCCCEEEeCCCCcc
Confidence            567899999999888652 3467999999988653

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=6.1e-25  Score=189.35  Aligned_cols=229  Identities=18%  Similarity=0.076  Sum_probs=170.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++++++|||||+|+||++++++|++.|++|++++|+.+..+...+.+. .+.++.++.+|+++++++.++++.+     +
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   80 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q   80 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc-cCCceEEEEccccCHHHHHHHHHhc-----C
Confidence            568999999999999999999999999999999998765444433332 2346788999999999999888865     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------CCCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------PPSAM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------~~~~~  157 (255)
                      +|+||||||...     .+.+.+++++.+++|+.++..+++++.+. ...++||++||...+.            +..+.
T Consensus        81 ~d~vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~  154 (357)
T 1rkx_A           81 PEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHV-GGVKAVVNITSDKCYDNKEWIWGYRENEAMGGY  154 (357)
T ss_dssp             CSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHH-CCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS
T ss_pred             CCEEEECCCCcc-----cccchhCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCC
Confidence            999999999632     12235667899999999999999999874 2356999999986432            33456


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC------C-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhccCC--------CCCCCC
Q 025259          158 AMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTL--------LNRLGT  221 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~------~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~--------~~~~~~  221 (255)
                      ..|+.+|.+.+.+++.++.++.      + +++++.+.||++.++....... ...+........+        ...+..
T Consensus       155 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~  234 (357)
T 1rkx_A          155 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH  234 (357)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred             CccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence            7899999999999999999884      3 8999999999999875321000 1122222222111        123677


Q ss_pred             hHHHHHHHHHhcCCC--CCCccccEEeeCCC
Q 025259          222 TGNMAAAIAFLASDD--ASYITGETLVVAGG  250 (255)
Q Consensus       222 ~~~va~~~~~l~s~~--~~~~~G~~i~~dgG  250 (255)
                      .+|+|++++.++...  .....|+++++.+|
T Consensus       235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             THHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             HHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            899999999887531  11245789999875

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.93  E-value=2e-25  Score=191.58  Aligned_cols=219  Identities=14%  Similarity=0.068  Sum_probs=163.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++|||||+|+||++++++|++.  |++|++++|+... ..+..+++  .+.++.++.+|++|++++.++++       .
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAI--LGDRVELVVGDIADAELVDKLAA-------K   75 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGG--CSSSEEEEECCTTCHHHHHHHHT-------T
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhh--ccCCeEEEECCCCCHHHHHHHhh-------c
Confidence            58999999999999999999999  8999999996521 01111111  13468899999999998887776       5


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------------  152 (255)
                      +|+|||+||... .    +.+.+++++.+++|+.++..+++++.+.   +.+||++||...+.                 
T Consensus        76 ~d~vih~A~~~~-~----~~~~~~~~~~~~~Nv~g~~~l~~a~~~~---~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~  147 (348)
T 1oc2_A           76 ADAIVHYAAESH-N----DNSLNDPSPFIHTNFIGTYTLLEAARKY---DIRFHHVSTDEVYGDLPLREDLPGHGEGPGE  147 (348)
T ss_dssp             CSEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGGCCBCCGGGSTTTTCSTTS
T ss_pred             CCEEEECCcccC-c----cchhhCHHHHHHHHHHHHHHHHHHHHHh---CCeEEEecccceeCCCcccccccccccccCC
Confidence            799999999743 1    1234557789999999999999999986   23999999976432                 


Q ss_pred             ------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC---------CCC
Q 025259          153 ------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT---------LLN  217 (255)
Q Consensus       153 ------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~  217 (255)
                            +.++...|+.+|++.+.+++.++.++  +++++.+.||.+.++........+.+........         ...
T Consensus       148 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (348)
T 1oc2_A          148 KFTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVR  225 (348)
T ss_dssp             SBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEE
T ss_pred             CcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh--CCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceE
Confidence                  23456789999999999999999887  7999999999999876421100112222222111         123


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+..++|+|+++++++...   .+|+++++++|...
T Consensus       226 ~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~~  258 (348)
T 1oc2_A          226 DWIHTNDHSTGVWAILTKG---RMGETYLIGADGEK  258 (348)
T ss_dssp             ECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             eeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCCC
Confidence            4678999999999998643   47999999998643

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.93  E-value=2.2e-25  Score=192.63  Aligned_cols=224  Identities=14%  Similarity=0.063  Sum_probs=158.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHH--cCCeEEEEeCChhHHHHHH-------HHHHHcCCeEEEEEecCCCHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGL--EGASVVISSRKQKNVDKAV-------EKLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~--~G~~Vv~~~r~~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      |.+++++++||||||+|+||++++++|++  .|++|++++|+.+......       ......+.++.++.+|+++++++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34578899999999999999999999999  8999999999765211000       00011234678899999999998


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC--
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP--  154 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~--  154 (255)
                      +++      ...++|+||||||... .      +.+++++.+++|+.++..+++++...   +.+||++||...+...  
T Consensus        84 ~~~------~~~~~D~vih~A~~~~-~------~~~~~~~~~~~Nv~gt~~ll~aa~~~---~~~~V~~SS~~vyg~~~~  147 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSD-T------TMLNQELVMKTNYQAFLNLLEIARSK---KAKVIYASSAGVYGNTKA  147 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCG-G------GCCCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGGCSCCS
T ss_pred             HHh------hccCCCEEEECCccCC-c------cccCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEeCcHHHhCCCCC
Confidence            876      2358999999999643 1      23457888999999999999999754   3469999996654322  


Q ss_pred             --------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc----CCHHHHHHhhccCC-------
Q 025259          155 --------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL----GNDAVRKALEGKTL-------  215 (255)
Q Consensus       155 --------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~-------  215 (255)
                              .+...|+.+|.+.+.+++.++.+    +++..+.|+.+..+......    ....+........+       
T Consensus       148 ~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  223 (362)
T 3sxp_A          148 PNVVGKNESPENVYGFSKLCMDEFVLSHSND----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFG  223 (362)
T ss_dssp             SBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGG
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHhcc----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCC
Confidence                    23456999999999999988776    56666667666554322110    01122222222221       


Q ss_pred             --CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          216 --LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       216 --~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                        ...+..++|+|+++++++....   +| ++++.+|...
T Consensus       224 ~~~~~~i~v~Dva~ai~~~~~~~~---~g-~~~i~~~~~~  259 (362)
T 3sxp_A          224 EQLRDFVYIEDVIQANVKAMKAQK---SG-VYNVGYSQAR  259 (362)
T ss_dssp             CCEEECEEHHHHHHHHHHHTTCSS---CE-EEEESCSCEE
T ss_pred             CeEEccEEHHHHHHHHHHHHhcCC---CC-EEEeCCCCCc
Confidence              1235668999999999997653   58 9999988653

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.92  E-value=5.6e-25  Score=194.23  Aligned_cols=221  Identities=13%  Similarity=0.037  Sum_probs=162.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh---HHHHHHHHHHH---------cCCeEEEEEecCCCHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK---NVDKAVEKLKA---------LGIEVIGIICHVSNEQH   75 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~---~~~~~~~~~~~---------~~~~~~~~~~D~~~~~~   75 (255)
                      ....+++||||||+|+||++++++|++.|++|++++|+.+   ..+++.+.++.         .+.++.++.+|++++++
T Consensus        65 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~  144 (427)
T 4f6c_A           65 SHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDD  144 (427)
T ss_dssp             CCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CC
T ss_pred             CCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCccc
Confidence            3456789999999999999999999999999999999977   34444444332         24679999999999888


Q ss_pred             HHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc-----
Q 025259           76 RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG-----  150 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~-----  150 (255)
                      +.        .++++|+||||||...        ..+++++.+++|+.++..+++++.+   ...++|++||..+     
T Consensus       145 l~--------~~~~~d~Vih~A~~~~--------~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~  205 (427)
T 4f6c_A          145 VV--------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFD  205 (427)
T ss_dssp             CC--------CSSCCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEEC
T ss_pred             CC--------CcCCCCEEEECCcccC--------CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCcc
Confidence            77        4568999999999753        1256788999999999999999998   4569999999887     


Q ss_pred             -------------cCCCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC-------HHHHHHh
Q 025259          151 -------------YQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN-------DAVRKAL  210 (255)
Q Consensus       151 -------------~~~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~  210 (255)
                                   ..+..+...|+.+|.+.+.+++.++..   +++++.+.||++.++........       ..+....
T Consensus       206 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~  282 (427)
T 4f6c_A          206 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNN---GLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDL  282 (427)
T ss_dssp             SSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHHT---TCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHH
T ss_pred             CCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHHc---CCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHH
Confidence                         011236788999999999999998653   89999999999987754332111       1222222


Q ss_pred             hccC--------CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          211 EGKT--------LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       211 ~~~~--------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ....        ....+...+|+|+++++++....   .|+++++++|...
T Consensus       283 ~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          283 LQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            2211        12347788999999999997654   7999999998754

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=1.7e-25  Score=183.29  Aligned_cols=215  Identities=12%  Similarity=-0.012  Sum_probs=157.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++++|||||+|+||++++++|++.  |++|++++|+++..++.       +.++.++.+|++|+++++++++      
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI-------GGEADVFIGDITDADSINPAFQ------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT-------TCCTTEEECCTTSHHHHHHHHT------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc-------CCCeeEEEecCCCHHHHHHHHc------
Confidence            35789999999999999999999999  89999999987655432       3456778999999999888775      


Q ss_pred             CCCcEEEECCCCCCCCCC--------cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           88 GRIDVFVLNAAVNPYAAD--------LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                       ++|++|||||.......        ..+...+++++.+++|+.++..+++++.+.  ..++||++||..+..+.++...
T Consensus        69 -~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~~~~~~~~~  145 (253)
T 1xq6_A           69 -GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA--GVKHIVVVGSMGGTNPDHPLNK  145 (253)
T ss_dssp             -TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH--TCSEEEEEEETTTTCTTCGGGG
T ss_pred             -CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHc--CCCEEEEEcCccCCCCCCcccc
Confidence             59999999997531110        112223445567899999999999998765  3469999999987655444433


Q ss_pred             -----hHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          160 -----YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       160 -----y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                           |+.+|++++.+++.      .+++++.+.||++.++................  .....+..++|+|+++++++.
T Consensus       146 ~~~~~y~~sK~~~e~~~~~------~~i~~~~vrpg~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dva~~~~~~~~  217 (253)
T 1xq6_A          146 LGNGNILVWKRKAEQYLAD------SGTPYTIIRAGGLLDKEGGVRELLVGKDDELL--QTDTKTVPRADVAEVCIQALL  217 (253)
T ss_dssp             GGGCCHHHHHHHHHHHHHT------SSSCEEEEEECEEECSCSSSSCEEEESTTGGG--GSSCCEEEHHHHHHHHHHHTT
T ss_pred             ccchhHHHHHHHHHHHHHh------CCCceEEEecceeecCCcchhhhhccCCcCCc--CCCCcEEcHHHHHHHHHHHHc
Confidence                 55699999988763      48999999999998875321000000000000  112457889999999999997


Q ss_pred             CCCCCccccEEeeCCC
Q 025259          235 DDASYITGETLVVAGG  250 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG  250 (255)
                      ...  .+|+++++++|
T Consensus       218 ~~~--~~g~~~~i~~~  231 (253)
T 1xq6_A          218 FEE--AKNKAFDLGSK  231 (253)
T ss_dssp             CGG--GTTEEEEEEEC
T ss_pred             Ccc--ccCCEEEecCC
Confidence            643  57999999986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1.1e-24  Score=186.45  Aligned_cols=209  Identities=12%  Similarity=0.140  Sum_probs=155.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      .++|||||+|+||++++++|+++|++|++++|+.+..+.+    ..  .++.++.+|++|++++.++++       ++|+
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l----~~--~~~~~~~~Dl~d~~~~~~~~~-------~~d~   80 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL----AY--LEPECRVAEMLDHAGLERALR-------GLDG   80 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG----GG--GCCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh----cc--CCeEEEEecCCCHHHHHHHHc-------CCCE
Confidence            3899999999999999999999999999999987654322    11  256788999999998887765       6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC----------------
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA----------------  156 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~----------------  156 (255)
                      |||+||...       .+.+++++.+++|+.++..+++++.+.  ..+++|++||...+.+.++                
T Consensus        81 vih~a~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~  151 (342)
T 2x4g_A           81 VIFSAGYYP-------SRPRRWQEEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSG  151 (342)
T ss_dssp             EEEC-------------------CHHHHHHHHHHHHHHHHHHH--TCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTT
T ss_pred             EEECCccCc-------CCCCCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccc
Confidence            999999642       134567888999999999999999985  3468999999887654433                


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhh-hhhcCCHHHHHHhhccCC------CCCCCChHHHHHHH
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA-QALLGNDAVRKALEGKTL------LNRLGTTGNMAAAI  229 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~  229 (255)
                      ...|+.+|.+.+.+++.++.+   +++++.+.||++.++.. ...  ...+........+      ...+..++|+|+++
T Consensus       152 ~~~Y~~sK~~~e~~~~~~~~~---g~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  226 (342)
T 2x4g_A          152 KSSYVLCKWALDEQAREQARN---GLPVVIGIPGMVLGELDIGPT--TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGL  226 (342)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHT---TCCEEEEEECEEECSCCSSCS--TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHhhc---CCcEEEEeCCceECCCCcccc--HHHHHHHHHcCCCccccCCCcceeeHHHHHHHH
Confidence            678999999999999999874   79999999999998764 211  1222233222211      12367899999999


Q ss_pred             HHhcCCCCCCccccEEeeCCCc
Q 025259          230 AFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      .+++.....   |+++++.+|.
T Consensus       227 ~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          227 LMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHhCCCC---CceEEEcCCc
Confidence            999875432   8999999885

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.92  E-value=6.6e-25  Score=190.72  Aligned_cols=223  Identities=12%  Similarity=-0.007  Sum_probs=163.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.++++++|||||+|+||++++++|+++| ++|++++|+.+...+   .+. ...++.++.+|++++++++++++     
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~---~l~-~~~~v~~~~~Dl~d~~~l~~~~~-----   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI---NVP-DHPAVRFSETSITDDALLASLQD-----   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG---GSC-CCTTEEEECSCTTCHHHHHHCCS-----
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh---hcc-CCCceEEEECCCCCHHHHHHHhh-----
Confidence            46789999999999999999999999999 999999998653211   010 13468899999999988776654     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC--------------
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--------------  152 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~--------------  152 (255)
                        ++|+|||+||... .    ..+.+++++.+++|+.++..+++++...- ...++|++||...+.              
T Consensus        99 --~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~~V~~SS~~vyg~~~~~~~~~~E~~~  170 (377)
T 2q1s_A           99 --EYDYVFHLATYHG-N----QSSIHDPLADHENNTLTTLKLYERLKHFK-RLKKVVYSAAGCSIAEKTFDDAKATEETD  170 (377)
T ss_dssp             --CCSEEEECCCCSC-H----HHHHHCHHHHHHHHTHHHHHHHHHHTTCS-SCCEEEEEEEC--------------CCCC
T ss_pred             --CCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHcCCCCCCCcCcccccc
Confidence              7999999999643 1    12345678899999999999999997641 234899999976431              


Q ss_pred             --CC-CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhh---------hhhc--C--CHHHHHHhhccCCC
Q 025259          153 --PP-SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA---------QALL--G--NDAVRKALEGKTLL  216 (255)
Q Consensus       153 --~~-~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~---------~~~~--~--~~~~~~~~~~~~~~  216 (255)
                        +. .+...|+.+|.+.+.+++.++.++  +++++.+.||++.++..         ....  .  ...+........+.
T Consensus       171 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~  248 (377)
T 2q1s_A          171 IVSLHNNDSPYSMSKIFGEFYSVYYHKQH--QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPL  248 (377)
T ss_dssp             CCCSSCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCC
T ss_pred             cccccCCCCchHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCe
Confidence              22 456789999999999999998877  89999999999988754         2100  0  12223333322222


Q ss_pred             ---------CCCCChHHHHHH-HHHhcCCCCCCccccEEeeCCCccC
Q 025259          217 ---------NRLGTTGNMAAA-IAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       217 ---------~~~~~~~~va~~-~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                               ..+..++|+|++ +++++....   +| ++++.+|...
T Consensus       249 ~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~~  291 (377)
T 2q1s_A          249 PLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKET  291 (377)
T ss_dssp             CCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCCE
T ss_pred             EEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCce
Confidence                     235568999999 999887643   68 9999988643

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.92  E-value=2.2e-24  Score=185.16  Aligned_cols=218  Identities=16%  Similarity=0.103  Sum_probs=159.6

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..-++++++|+||||||+|+||++++++|+++|++|++++|+.+.            .++.++.+|+++.+++.++++  
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~------------~~~~~~~~Dl~d~~~~~~~~~--   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG------------TGGEEVVGSLEDGQALSDAIM--   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS------------SCCSEEESCTTCHHHHHHHHT--
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC------------CCccEEecCcCCHHHHHHHHh--
Confidence            344567889999999999999999999999999999999998754            356788999999999887776  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------  152 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------  152 (255)
                           ++|+|||+|+... .      +.+++++.+++|+.++..+++++...  ..++||++||...+.           
T Consensus        77 -----~~d~vih~A~~~~-~------~~~~~~~~~~~nv~~~~~ll~a~~~~--~~~~~V~~SS~~vyg~~~~~~~~~~E  142 (347)
T 4id9_A           77 -----GVSAVLHLGAFMS-W------APADRDRMFAVNVEGTRRLLDAASAA--GVRRFVFASSGEVYPENRPEFLPVTE  142 (347)
T ss_dssp             -----TCSEEEECCCCCC-S------SGGGHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGTTTTSCSSSSBCT
T ss_pred             -----CCCEEEECCcccC-c------chhhHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEECCHHHhCCCCCCCCCcCC
Confidence                 7999999999753 1      23445889999999999999999874  345999999965543           


Q ss_pred             --CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCccc-------------Chhhhhhc--------CC---HHH
Q 025259          153 --PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP-------------THFAQALL--------GN---DAV  206 (255)
Q Consensus       153 --~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~-------------t~~~~~~~--------~~---~~~  206 (255)
                        +..+...|+.+|.+.+.+++.++.+.  ++++..+.|+++.             ++......        ..   ..+
T Consensus       143 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~  220 (347)
T 4id9_A          143 DHPLCPNSPYGLTKLLGEELVRFHQRSG--AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAEL  220 (347)
T ss_dssp             TSCCCCCSHHHHHHHHHHHHHHHHHHHS--SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHH
T ss_pred             CCCCCCCChHHHHHHHHHHHHHHHHHhc--CCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHH
Confidence              23456789999999999999999886  7999999999988             43321100        01   112


Q ss_pred             HHHhhccCC---------CCCC----CChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          207 RKALEGKTL---------LNRL----GTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       207 ~~~~~~~~~---------~~~~----~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ........+         ...+    ..++|+|++++.++....  ..|+++++.+|...
T Consensus       221 ~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~~  278 (347)
T 4id9_A          221 LQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEPA  278 (347)
T ss_dssp             HHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSCE
T ss_pred             HHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCcc
Confidence            222222211         1234    778999999999997643  45899999988653

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.92  E-value=5.7e-25  Score=226.22  Aligned_cols=177  Identities=20%  Similarity=0.213  Sum_probs=144.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHH---HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNV---DKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+|++|||||++|||++++++|+++|++ |++++|+.+..   ++..++++..+.++.++.||++++++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            5899999999999999999999999997 88899986443   45556666678899999999999999999999987 4


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      +|++|+||||||+.. ..++.+.+.++|++++++|+.|++++.+++.+.+.+.++||++||..+..+.++...|+++|++
T Consensus      1962 ~g~id~lVnnAgv~~-~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaa 2040 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLR-DAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSA 2040 (2512)
T ss_dssp             HSCEEEEEECCCC-----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHH
T ss_pred             cCCCcEEEECCCcCC-CCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHH
Confidence            799999999999875 6788999999999999999999999999999988777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcc
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFV  192 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v  192 (255)
                      +++|++.++.+   |++..++.+|.+
T Consensus      2041 l~~l~~~rr~~---Gl~~~a~~~g~~ 2063 (2512)
T 2vz8_A         2041 MERICEKRRHD---GLPGLAVQWGAI 2063 (2512)
T ss_dssp             HHHHHHHHHHT---TSCCCEEEECCB
T ss_pred             HHHHHHHHHHC---CCcEEEEEccCc
Confidence            99999988887   777777777755

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.92  E-value=2.3e-23  Score=182.16  Aligned_cols=232  Identities=11%  Similarity=0.027  Sum_probs=164.1

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHH-----------------HHHHHHHHcCCeEEEEEe
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD-----------------KAVEKLKALGIEVIGIIC   68 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~   68 (255)
                      .....++.+||||||+|.||++++++|+++|++|++++|......                 .........+.++.++.+
T Consensus         5 ~~~~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~   84 (404)
T 1i24_A            5 HHHHHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVG   84 (404)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEES
T ss_pred             cccccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEEC
Confidence            345567899999999999999999999999999999998754321                 111111122456888999


Q ss_pred             cCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           69 HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        69 D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |+++++++.++++..     ++|+||||||... . .....+++++.+.+++|+.++..+++++.+... ..+||++||.
T Consensus        85 Dl~d~~~~~~~~~~~-----~~D~Vih~A~~~~-~-~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~-~~~~V~~SS~  156 (404)
T 1i24_A           85 DICDFEFLAESFKSF-----EPDSVVHFGEQRS-A-PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTM  156 (404)
T ss_dssp             CTTSHHHHHHHHHHH-----CCSEEEECCSCCC-H-HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCG
T ss_pred             CCCCHHHHHHHHhcc-----CCCEEEECCCCCC-c-cchhhCccchhhhHHHHHHHHHHHHHHHHHhCC-CcEEEEeCcH
Confidence            999999999888765     6999999999753 1 122336677888999999999999999987531 2489999998


Q ss_pred             CccC------------------------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc---
Q 025259          149 AGYQ------------------------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL---  201 (255)
Q Consensus       149 ~~~~------------------------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~---  201 (255)
                      ..+.                        +..+...|+.+|++.+.+++.++.++  +++++.+.||.+.++......   
T Consensus       157 ~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ivrp~~v~Gp~~~~~~~~~  234 (404)
T 1i24_A          157 GEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGVKTDETEMHE  234 (404)
T ss_dssp             GGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSCCTTGGGSG
T ss_pred             HHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc--CCeEEEEecceeeCCCCCcccccc
Confidence            6542                        33346789999999999999998887  899999999999887532100   


Q ss_pred             ------------C--CHHHHHHhhccCC---------CCCCCChHHHHHHHHHhcCCCCCCccc--cEEeeCC
Q 025259          202 ------------G--NDAVRKALEGKTL---------LNRLGTTGNMAAAIAFLASDDASYITG--ETLVVAG  249 (255)
Q Consensus       202 ------------~--~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~l~s~~~~~~~G--~~i~~dg  249 (255)
                                  .  ...+........+         ...+...+|+|++++.++....  ..|  +++++.+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          235 ELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             GGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                        0  1122222222211         1234678999999999886432  235  7888865

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=3.6e-25  Score=178.28  Aligned_cols=192  Identities=17%  Similarity=0.218  Sum_probs=155.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||+|+||++++++|+++|++|++++|+.+..+..        .++.++.+|++| ++++.++++       ++|+
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~-------~~d~   66 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY--------NNVKAVHFDVDWTPEEMAKQLH-------GMDA   66 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC--------TTEEEEECCTTSCHHHHHTTTT-------TCSE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc--------CCceEEEecccCCHHHHHHHHc-------CCCE
Confidence            699999999999999999999999999999998654332        468899999999 888877765       6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC-------ChhhHHhHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-------MAMYGVTKT  165 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~-------~~~y~~sKa  165 (255)
                      ||||||... .            +.+++|+.++..+++++...  ..++||++||..+..+.+.       ...|+.+|+
T Consensus        67 vi~~ag~~~-~------------~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~  131 (219)
T 3dqp_A           67 IINVSGSGG-K------------SLLKVDLYGAVKLMQAAEKA--EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKH  131 (219)
T ss_dssp             EEECCCCTT-S------------SCCCCCCHHHHHHHHHHHHT--TCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHH
T ss_pred             EEECCcCCC-C------------CcEeEeHHHHHHHHHHHHHh--CCCEEEEECcccccCCCcccccccccccHHHHHHH
Confidence            999999753 1            15889999999999998764  3359999999988776655       788999999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +.+.+++   .  ..+++++.+.||++.++........         ......+..++|+|+++++++....  ..|+++
T Consensus       132 ~~e~~~~---~--~~~i~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~i~~~Dva~~i~~~l~~~~--~~g~~~  195 (219)
T 3dqp_A          132 FADLYLT---K--ETNLDYTIIQPGALTEEEATGLIDI---------NDEVSASNTIGDVADTIKELVMTDH--SIGKVI  195 (219)
T ss_dssp             HHHHHHH---H--SCCCEEEEEEECSEECSCCCSEEEE---------SSSCCCCEEHHHHHHHHHHHHTCGG--GTTEEE
T ss_pred             HHHHHHH---h--ccCCcEEEEeCceEecCCCCCcccc---------CCCcCCcccHHHHHHHHHHHHhCcc--ccCcEE
Confidence            9999987   1  2389999999999988754322211         1345668899999999999997643  559999


Q ss_pred             eeCCCc
Q 025259          246 VVAGGM  251 (255)
Q Consensus       246 ~~dgG~  251 (255)
                      ++++|.
T Consensus       196 ~i~~g~  201 (219)
T 3dqp_A          196 SMHNGK  201 (219)
T ss_dssp             EEEECS
T ss_pred             EeCCCC
Confidence            997774

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=8.6e-24  Score=168.02  Aligned_cols=198  Identities=11%  Similarity=0.044  Sum_probs=150.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++++||||+|+||++++++|+++|++|++++|+++..+..      ...++.++.+|++|++++.++++       .+|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~-------~~d   69 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc------cCCceEEEEecCCCHHHHHHHHc-------CCC
Confidence            37899999999999999999999999999999998654221      13467889999999998887765       589


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC----CChhhHHhHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS----AMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~----~~~~y~~sKaa~  167 (255)
                      ++||++|.... .   +  +      .++|+.++..+++++.+.  ..+++|++||...+...+    +...|+.+|.++
T Consensus        70 ~vi~~a~~~~~-~---~--~------~~~n~~~~~~~~~~~~~~--~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~  135 (206)
T 1hdo_A           70 AVIVLLGTRND-L---S--P------TTVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRM  135 (206)
T ss_dssp             EEEECCCCTTC-C---S--C------CCHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHH
T ss_pred             EEEECccCCCC-C---C--c------cchHHHHHHHHHHHHHHh--CCCeEEEEeeeeeccCcccccccchhHHHHHHHH
Confidence            99999997542 1   1  1      137888999999988764  345899999997765544    567899999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcc-cChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFV-PTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.+++.      .+++++.+.||++ .++.......      .. ...+.+.+..++|+|+++.+++...  ..+|++++
T Consensus       136 e~~~~~------~~i~~~~lrp~~~~~~~~~~~~~~------~~-~~~~~~~~i~~~Dva~~~~~~~~~~--~~~g~~~~  200 (206)
T 1hdo_A          136 HKVLRE------SGLKYVAVMPPHIGDQPLTGAYTV------TL-DGRGPSRVISKHDLGHFMLRCLTTD--EYDGHSTY  200 (206)
T ss_dssp             HHHHHH------TCSEEEEECCSEEECCCCCSCCEE------ES-SSCSSCSEEEHHHHHHHHHHTTSCS--TTTTCEEE
T ss_pred             HHHHHh------CCCCEEEEeCCcccCCCCCcceEe------cc-cCCCCCCccCHHHHHHHHHHHhcCc--ccccccee
Confidence            998842      3799999999998 3432211100      00 1112156889999999999999764  37899999


Q ss_pred             eCCCc
Q 025259          247 VAGGM  251 (255)
Q Consensus       247 ~dgG~  251 (255)
                      ++||.
T Consensus       201 i~~g~  205 (206)
T 1hdo_A          201 PSHQY  205 (206)
T ss_dssp             EECCC
T ss_pred             eeccc
Confidence            99985

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.92  E-value=2.8e-24  Score=183.76  Aligned_cols=218  Identities=15%  Similarity=0.032  Sum_probs=152.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +-...++++++|||||+|+||++++++|++.|++|++++|+.+...+.   +... .++.++.+|++|+++++++++.  
T Consensus        14 ~~~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---l~~~-~~~~~~~~Dl~d~~~~~~~~~~--   87 (333)
T 2q1w_A           14 LVPRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH---LKDH-PNLTFVEGSIADHALVNQLIGD--   87 (333)
T ss_dssp             -------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---SCCC-TTEEEEECCTTCHHHHHHHHHH--
T ss_pred             eeeecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh---Hhhc-CCceEEEEeCCCHHHHHHHHhc--
Confidence            344567889999999999999999999999999999999975432111   1111 3678899999999999888875  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC----CC------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ----PP------  154 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~----~~------  154 (255)
                         +++|+||||||... ..     +.++++  +++|+.++..+++++.+.  ..++||++||...+.    ..      
T Consensus        88 ---~~~D~vih~A~~~~-~~-----~~~~~~--~~~N~~~~~~l~~a~~~~--~~~~iV~~SS~~~~g~~~~~~~~~~~E  154 (333)
T 2q1w_A           88 ---LQPDAVVHTAASYK-DP-----DDWYND--TLTNCVGGSNVVQAAKKN--NVGRFVYFQTALCYGVKPIQQPVRLDH  154 (333)
T ss_dssp             ---HCCSEEEECCCCCS-CT-----TCHHHH--HHHHTHHHHHHHHHHHHT--TCSEEEEEEEGGGGCSCCCSSSBCTTS
T ss_pred             ---cCCcEEEECceecC-CC-----ccCChH--HHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCcccCCCCcCC
Confidence               26999999999754 21     234444  999999999999999874  346999999987654    21      


Q ss_pred             --CCC-hhhHHhHHHHHHHHHH-HHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhc------cCCCCCCCChHH
Q 025259          155 --SAM-AMYGVTKTALLGLTKA-LAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEG------KTLLNRLGTTGN  224 (255)
Q Consensus       155 --~~~-~~y~~sKaa~~~l~~~-la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~  224 (255)
                        .+. ..|+.+|++.+.+++. ++       ++..+.|+.+..+...... .+.+......      ......+..++|
T Consensus       155 ~~~p~~~~Y~~sK~~~E~~~~~s~~-------~~~ilR~~~v~gp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D  226 (333)
T 2q1w_A          155 PRNPANSSYAISKSANEDYLEYSGL-------DFVTFRLANVVGPRNVSGP-LPIFFQRLSEGKKCFVTKARRDFVFVKD  226 (333)
T ss_dssp             CCCCTTCHHHHHHHHHHHHHHHHTC-------CEEEEEESEEESTTCCSSH-HHHHHHHHHTTCCCEEEECEECEEEHHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHhhhC-------CeEEEeeceEECcCCcCcH-HHHHHHHHHcCCeeeCCCceEeeEEHHH
Confidence              234 7899999999999987 65       4556666655554310000 0111111111      122345778999


Q ss_pred             HHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          225 MAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       225 va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +|+++.++++...    |+++++++|...
T Consensus       227 va~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          227 LARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             HHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             HHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            9999999997654    899999998653

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.92  E-value=3.8e-24  Score=183.02  Aligned_cols=219  Identities=18%  Similarity=0.140  Sum_probs=154.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++|++|||||+|+||++++++|+++|++|+++.|+.+..++... +.+.   +.++.++.+|++|+++++++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDLPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTSTTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhcccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            468999999999999999999999999999999998765433222 1111   1257889999999998887765     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC------------
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP------------  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~------------  154 (255)
                        .+|+|||+|+...    ....  +..++.+++|+.++..+++++.+.. ..++||++||..+..+.            
T Consensus        77 --~~d~Vih~A~~~~----~~~~--~~~~~~~~~nv~gt~~ll~a~~~~~-~~~riV~~SS~~~~~~~~~~~~~~~E~~~  147 (337)
T 2c29_D           77 --GCTGVFHVATPMD----FESK--DPENEVIKPTIEGMLGIMKSCAAAK-TVRRLVFTSSAGTVNIQEHQLPVYDESCW  147 (337)
T ss_dssp             --TCSEEEECCCCCC----SSCS--SHHHHTHHHHHHHHHHHHHHHHHHS-CCCEEEEECCGGGTSCSSSCCSEECTTCC
T ss_pred             --CCCEEEEeccccC----CCCC--ChHHHHHHHHHHHHHHHHHHHHhCC-CccEEEEeeeHhhcccCCCCCcccCcccC
Confidence              6899999998542    1111  2235689999999999999998764 24699999998754321            


Q ss_pred             ----------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHH---hhcc------CC
Q 025259          155 ----------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKA---LEGK------TL  215 (255)
Q Consensus       155 ----------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~---~~~~------~~  215 (255)
                                ++...|+.||.+.+.+++.++.+.  +++++.+.|+.+.++....... ......   ....      .+
T Consensus       148 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~~~~~  224 (337)
T 2c29_D          148 SDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKEN--NIDFITIIPTLVVGPFIMSSMP-PSLITALSPITGNEAHYSIIR  224 (337)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEECEEESCCSCSSCC-HHHHHHTHHHHTCGGGHHHHT
T ss_pred             CchhhhcccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCCccccccC
Confidence                      123469999999999998887655  8999999999999886432211 111111   0110      12


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          216 LNRLGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       216 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ..++..++|+|+++++++...  ..+|..+..+
T Consensus       225 ~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~  255 (337)
T 2c29_D          225 QGQFVHLDDLCNAHIYLFENP--KAEGRYICSS  255 (337)
T ss_dssp             EEEEEEHHHHHHHHHHHHHCT--TCCEEEEECC
T ss_pred             CCCEEEHHHHHHHHHHHhcCc--ccCceEEEeC
Confidence            234789999999999998643  2356544333

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.92  E-value=3.8e-25  Score=187.07  Aligned_cols=216  Identities=17%  Similarity=0.038  Sum_probs=161.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+++|++|++++|+.+...+.      ....+.++.+|++|++ +.++++       . |+
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~~~~~~~Dl~d~~-~~~~~~-------~-d~   65 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF------VNPSAELHVRDLKDYS-WGAGIK-------G-DV   65 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG------SCTTSEEECCCTTSTT-TTTTCC-------C-SE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh------cCCCceEEECccccHH-HHhhcC-------C-CE
Confidence            4799999999999999999999999999999976543221      1346788999999987 554443       3 99


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~~y~  161 (255)
                      |||+|+...     .+.+.+++++.+++|+.++..+++++...  ..++||++||...+.           +..+...|+
T Consensus        66 vih~A~~~~-----~~~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~  138 (312)
T 3ko8_A           66 VFHFAANPE-----VRLSTTEPIVHFNENVVATFNVLEWARQT--GVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYG  138 (312)
T ss_dssp             EEECCSSCS-----SSGGGSCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----chhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHH
Confidence            999999642     22344567788999999999999999764  345899999987653           234567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhh-ccCC---------CCCCCChHHHHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALE-GKTL---------LNRLGTTGNMAAAIAF  231 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~va~~~~~  231 (255)
                      .+|.+.+.+++.++.++  +++++.+.|+++.++....... ..+..... ...+         ...+..++|+|+++++
T Consensus       139 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  215 (312)
T 3ko8_A          139 AAKAAGEVMCATYARLF--GVRCLAVRYANVVGPRLRHGVI-YDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLA  215 (312)
T ss_dssp             HHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCSSHH-HHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHh--CCCEEEEeeccccCcCCCCChH-HHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHH
Confidence            99999999999999988  8999999999999886432111 11222221 1111         1235668999999999


Q ss_pred             hcCC-CCCCccccEEeeCCCccC
Q 025259          232 LASD-DASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~-~~~~~~G~~i~~dgG~~~  253 (255)
                      ++.. ......|+++++.+|...
T Consensus       216 ~~~~~~~~~~~~~~~ni~~~~~~  238 (312)
T 3ko8_A          216 AWKKFEEMDAPFLALNVGNVDAV  238 (312)
T ss_dssp             HHHHHHHSCCSEEEEEESCSSCE
T ss_pred             HHHhccccCCCCcEEEEcCCCce
Confidence            9865 223357899999988653

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=1.5e-24  Score=183.57  Aligned_cols=215  Identities=16%  Similarity=0.081  Sum_probs=158.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+++|++|++++|..+....      ....++.++.+|++++++++++++..     ++|++
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~v   70 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------NVPKGVPFFRVDLRDKEGVERAFREF-----RPTHV   70 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------GSCTTCCEECCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------hcccCeEEEECCCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999999999999985432110      11124567899999999998888752     79999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc-CccC------------CCCCChhh
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI-AGYQ------------PPSAMAMY  160 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~-~~~~------------~~~~~~~y  160 (255)
                      ||+|+... .    ..+.+++++.+++|+.+++.+++++.+.  ..++||++||. ..+.            +..+...|
T Consensus        71 i~~a~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~--~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y  143 (311)
T 2p5y_A           71 SHQAAQAS-V----KVSVEDPVLDFEVNLLGGLNLLEACRQY--GVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPY  143 (311)
T ss_dssp             EECCSCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHT--TCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHH
T ss_pred             EECccccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChH
Confidence            99999643 1    1234567889999999999999999864  23589999997 3221            11345789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHHhhccC--------------CCCCCCChH
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKALEGKT--------------LLNRLGTTG  223 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~--------------~~~~~~~~~  223 (255)
                      +.+|++.+.+++.++.++  +++++.+.|+.+.++........   ..+........              ....+..++
T Consensus       144 ~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  221 (311)
T 2p5y_A          144 AASKAAFEHYLSVYGQSY--GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG  221 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence            999999999999999887  79999999999988754321111   11222221111              112456789


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+++.+++...     |+++++++|...
T Consensus       222 Dva~a~~~~~~~~-----~~~~~i~~~~~~  246 (311)
T 2p5y_A          222 DVAEAHALALFSL-----EGIYNVGTGEGH  246 (311)
T ss_dssp             HHHHHHHHHHHHC-----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHhCC-----CCEEEeCCCCCc
Confidence            9999999988652     889999988653

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.91  E-value=9.8e-24  Score=181.03  Aligned_cols=228  Identities=13%  Similarity=0.065  Sum_probs=163.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH------HHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN------VDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~------~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +|++|||||+|+||++++++|++.|++|++++|+...      ..+..+++.+ .+.++.++.+|++++++++++++.. 
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc-
Confidence            4789999999999999999999999999999886432      2222333332 2456788999999999988887752 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                          ++|+|||+||... ..    .+.+++++.+++|+.++..+++++...  ..++||++||...+..           
T Consensus        81 ----~~d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~E~~~  149 (348)
T 1ek6_A           81 ----SFMAVIHFAGLKA-VG----ESVQKPLDYYRVNLTGTIQLLEIMKAH--GVKNLVFSSSATVYGNPQYLPLDEAHP  149 (348)
T ss_dssp             ----CEEEEEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ----CCCEEEECCCCcC-cc----chhhchHHHHHHHHHHHHHHHHHHHHh--CCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence                7999999999753 11    134567889999999999999988764  3468999999876532           


Q ss_pred             C-CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc--------C--CHHHHHHhh-ccC-------
Q 025259          154 P-SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL--------G--NDAVRKALE-GKT-------  214 (255)
Q Consensus       154 ~-~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~--------~--~~~~~~~~~-~~~-------  214 (255)
                      . +....|+.+|++.+.+++.++.+ .+++++..+.|+.+.++.....+        .  .+.+..... ...       
T Consensus       150 ~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  228 (348)
T 1ek6_A          150 TGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN  228 (348)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCC
Confidence            1 22678999999999999999988 44699999999988765311000        0  011222222 111       


Q ss_pred             --------CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          215 --------LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       215 --------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                              ....+...+|+|++++.++........++++++.+|..
T Consensus       229 ~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~  274 (348)
T 1ek6_A          229 DYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTG  274 (348)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCC
T ss_pred             cccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCC
Confidence                    11235678999999998885432122348999988754

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=2.2e-24  Score=184.43  Aligned_cols=219  Identities=15%  Similarity=0.070  Sum_probs=161.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc---C---CeEEEEeCChhH--HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLE---G---ASVVISSRKQKN--VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~---G---~~Vv~~~r~~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++|||||+|+||++++++|+++   |   ++|++++|+...  .+.. +.+. .+.++.++.+|++|++++++++     
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~Dl~d~~~~~~~~-----   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL-APVD-ADPRLRFVHGDIRDAGLLAREL-----   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG-GGGT-TCTTEEEEECCTTCHHHHHHHT-----
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh-hhcc-cCCCeEEEEcCCCCHHHHHHHh-----
Confidence            6999999999999999999997   8   899999986421  1111 1111 1356889999999998887776     


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PP  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~  154 (255)
                        .++|+|||+||... .    +.+.+++++.+++|+.++..+++++.+..  .++||++||...+.           +.
T Consensus        75 --~~~d~Vih~A~~~~-~----~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~  145 (337)
T 1r6d_A           75 --RGVDAIVHFAAESH-V----DRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGSWTESSPL  145 (337)
T ss_dssp             --TTCCEEEECCSCCC-H----HHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred             --cCCCEEEECCCccC-c----hhhhhCHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEecchHHhCCCCCCCCCCCCCC
Confidence              37999999999643 1    12335577889999999999999999864  35999999976542           33


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC---------CCCCCChHHH
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL---------LNRLGTTGNM  225 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~v  225 (255)
                      .+...|+.+|++.+.+++.++.++  +++++.+.|+++.++..........+........+         ...+..++|+
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~--g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dv  223 (337)
T 1r6d_A          146 EPNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDH  223 (337)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHH--CCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHH
Confidence            456789999999999999999887  78999999999988764211001122222222111         1235678999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          226 AAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+++++++...   .+|+++++++|...
T Consensus       224 a~a~~~~~~~~---~~g~~~~v~~~~~~  248 (337)
T 1r6d_A          224 CRGIALVLAGG---RAGEIYHIGGGLEL  248 (337)
T ss_dssp             HHHHHHHHHHC---CTTCEEEECCCCEE
T ss_pred             HHHHHHHHhCC---CCCCEEEeCCCCCc
Confidence            99999988643   36899999998653

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.91  E-value=1e-23  Score=183.36  Aligned_cols=219  Identities=15%  Similarity=0.056  Sum_probs=163.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++|||||+|+||++++++|+++|++|++++|+.+.....      ...++.++.+|++|++++.++++       +
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~------~~~~v~~~~~Dl~d~~~~~~~~~-------~   93 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE------DMFCDEFHLVDLRVMENCLKVTE-------G   93 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG------GGTCSEEEECCTTSHHHHHHHHT-------T
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh------ccCCceEEECCCCCHHHHHHHhC-------C
Confidence            3578999999999999999999999999999999986542211      12356788999999999887775       7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------------  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------------  152 (255)
                      +|+|||+|+... ....   ..+++++.+++|+.++..+++++...  ..++||++||...+.                 
T Consensus        94 ~d~Vih~A~~~~-~~~~---~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~  167 (379)
T 2c5a_A           94 VDHVFNLAADMG-GMGF---IQSNHSVIMYNNTMISFNMIEAARIN--GIKRFFYASSACIYPEFKQLETTNVSLKESDA  167 (379)
T ss_dssp             CSEEEECCCCCC-CHHH---HTTCHHHHHHHHHHHHHHHHHHHHHT--TCSEEEEEEEGGGSCGGGSSSSSSCEECGGGG
T ss_pred             CCEEEECceecC-cccc---cccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEEeehheeCCCCCCCccCCCcCcccC
Confidence            999999999753 1111   12346788999999999999999864  235899999976543                 


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccC----------CCC
Q 025259          153 -PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKT----------LLN  217 (255)
Q Consensus       153 -~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~----------~~~  217 (255)
                       +..+...|+.+|.+.+.+++.++.++  +++++.+.||++.++.......    ...+........          ...
T Consensus       168 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~  245 (379)
T 2c5a_A          168 WPAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTR  245 (379)
T ss_dssp             SSBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHH--CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeE
Confidence             23456789999999999999998876  7999999999999875432110    112222221111          123


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+..++|+|+++++++...    .|+++++.+|...
T Consensus       246 ~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~~  277 (379)
T 2c5a_A          246 SFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  277 (379)
T ss_dssp             CCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCcc
Confidence            4677899999999998654    4788999988653

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.91  E-value=8.4e-24  Score=179.05  Aligned_cols=213  Identities=16%  Similarity=0.114  Sum_probs=157.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|+++|..|++..++....+       .....+.++.+|+++ +++.++++       ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~v~~~~~~~~~~~-------~~~~~~~~~~~Dl~~-~~~~~~~~-------~~d~   66 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESNEIVVIDNLSSGNEE-------FVNEAARLVKADLAA-DDIKDYLK-------GAEE   66 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTSCEEEECCCSSCCGG-------GSCTTEEEECCCTTT-SCCHHHHT-------TCSE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCCCEEEEEcCCCCChh-------hcCCCcEEEECcCCh-HHHHHHhc-------CCCE
Confidence            47999999999999999999999955555444443221       113468889999999 88777665       7999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~~y~  161 (255)
                      +||+|+...     .+.+.+++++.+++|+.++..+++++...  ..+++|++||...+.           +..+...|+
T Consensus        67 vih~a~~~~-----~~~~~~~~~~~~~~nv~~~~~l~~~~~~~--~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~  139 (313)
T 3ehe_A           67 VWHIAANPD-----VRIGAENPDEIYRNNVLATYRLLEAMRKA--GVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYG  139 (313)
T ss_dssp             EEECCCCCC-----CC-CCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHH
T ss_pred             EEECCCCCC-----hhhhhhCHHHHHHHHHHHHHHHHHHHHHc--CCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHH
Confidence            999999532     23344567888999999999999998764  345999999987652           445667899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHh-hccC---------CCCCCCChHHHHHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKAL-EGKT---------LLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~---------~~~~~~~~~~va~~~~~  231 (255)
                      .+|.+.+.+++.++.++  +++++.+.|+.+.++...... ...+.... ....         ....+...+|+|+++++
T Consensus       140 ~sK~~~e~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~  216 (313)
T 3ehe_A          140 ASKLACEALIESYCHTF--DMQAWIYRFANVIGRRSTHGV-IYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLF  216 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT--TCEEEEEECSCEESTTCCCSH-HHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhc--CCCEEEEeeccccCcCCCcCh-HHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHH
Confidence            99999999999999987  899999999999887432110 01112211 1111         11246778999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccC
Q 025259          232 LASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++..   ...|+++++.+|...
T Consensus       217 ~~~~---~~~~~~~ni~~~~~~  235 (313)
T 3ehe_A          217 GLRG---DERVNIFNIGSEDQI  235 (313)
T ss_dssp             HTTC---CSSEEEEECCCSCCE
T ss_pred             Hhcc---CCCCceEEECCCCCe
Confidence            9972   356899999988653

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.91  E-value=6.8e-24  Score=172.87  Aligned_cols=190  Identities=14%  Similarity=0.136  Sum_probs=132.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ....|++|||||+|+||++++++|+++| +.|++++|+++.+++.      ...++.++.+|++|+++++++++      
T Consensus        20 ~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~------~~~~~~~~~~Dl~d~~~~~~~~~------   87 (236)
T 3qvo_A           20 QGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP------YPTNSQIIMGDVLNHAALKQAMQ------   87 (236)
T ss_dssp             --CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS------CCTTEEEEECCTTCHHHHHHHHT------
T ss_pred             cCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc------ccCCcEEEEecCCCHHHHHHHhc------
Confidence            3446799999999999999999999999 8999999998764331      13468899999999999888876      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC--------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM--------  157 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~--------  157 (255)
                       .+|+||||+|...            +.           ..++.+++.++  ..++||++||..++.+.+..        
T Consensus        88 -~~D~vv~~a~~~~------------~~-----------~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~  143 (236)
T 3qvo_A           88 -GQDIVYANLTGED------------LD-----------IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAV  143 (236)
T ss_dssp             -TCSEEEEECCSTT------------HH-----------HHHHHHHHHHHHTTCCEEEEECCCCC---------------
T ss_pred             -CCCEEEEcCCCCc------------hh-----------HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhc
Confidence             6899999998521            10           22345555553  34689999998877654432        


Q ss_pred             -----hhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          158 -----AMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       158 -----~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                           ..|..+|..           +.+ +|+++.|.||++.++.......      ........+++.+++|||+++++
T Consensus       144 ~~~~~~~~~~~~~~-----------l~~~gi~~~~vrPg~i~~~~~~~~~~------~~~~~~~~~~~i~~~DvA~~i~~  206 (236)
T 3qvo_A          144 IGEPLKPFRRAADA-----------IEASGLEYTILRPAWLTDEDIIDYEL------TSRNEPFKGTIVSRKSVAALITD  206 (236)
T ss_dssp             -CGGGHHHHHHHHH-----------HHTSCSEEEEEEECEEECCSCCCCEE------ECTTSCCSCSEEEHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHH-----------HHHCCCCEEEEeCCcccCCCCcceEE------eccCCCCCCcEECHHHHHHHHHH
Confidence                 223333222           224 9999999999998875322100      00111223567899999999999


Q ss_pred             hcCCCCCCccccEEeeCCCcc
Q 025259          232 LASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++++...++ |+.+.++++.+
T Consensus       207 ll~~~~~~~-g~~~~i~~~~~  226 (236)
T 3qvo_A          207 IIDKPEKHI-GENIGINQPGT  226 (236)
T ss_dssp             HHHSTTTTT-TEEEEEECSSC
T ss_pred             HHcCccccc-CeeEEecCCCC
Confidence            998876655 89999988765

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.91  E-value=2e-23  Score=181.40  Aligned_cols=224  Identities=16%  Similarity=0.105  Sum_probs=156.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |+||||||+|+||++++++|++.|++|++++|+.+.     ++.....+...+. ++.++.+|+++++++.++++.+   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            789999999999999999999999999999998653     2222222222223 6888999999999999888865   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC---CCeEEEEcCcCccC----------C
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK---GSSVVFISSIAGYQ----------P  153 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~---~~~iv~vss~~~~~----------~  153 (255)
                        ++|+|||+||... .    +.+.+++++.+++|+.++..+++++.+...+   .++||++||...+.          +
T Consensus       106 --~~d~Vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~  178 (381)
T 1n7h_A          106 --KPDEVYNLAAQSH-V----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  178 (381)
T ss_dssp             --CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --CCCEEEECCcccC-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCC
Confidence              6999999999753 1    1234668899999999999999999987632   46999999987653          2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCC----CcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc---------CCCCCCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK---------TLLNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~----~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~---------~~~~~~~  220 (255)
                      ..+...|+.+|++.+.+++.++.+++-    .+.++.+.||...+......  ...+.......         .....+.
T Consensus       179 ~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~--~~~~~~~~~g~~~~~~~g~~~~~~~~v  256 (381)
T 1n7h_A          179 FHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKI--TRALGRIKVGLQTKLFLGNLQASRDWG  256 (381)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHH--HHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHH--HHHHHHHHcCCCCeEEeCCCCceeeeE
Confidence            345678999999999999999988742    11233444443322110000  00011111111         1123477


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      .++|+|+++++++....    ++++++.+|..
T Consensus       257 ~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  284 (381)
T 1n7h_A          257 FAGDYVEAMWLMLQQEK----PDDYVVATEEG  284 (381)
T ss_dssp             EHHHHHHHHHHHHTSSS----CCEEEECCSCE
T ss_pred             EHHHHHHHHHHHHhCCC----CCeEEeeCCCC
Confidence            89999999999997643    47899988864

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.91  E-value=9e-24  Score=179.30  Aligned_cols=216  Identities=16%  Similarity=0.081  Sum_probs=148.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeC-ChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ||++|||||+|+||++++++|+++|++|+++.| +.+..++. ..+.+.   +.++.++.+|++|+++++++++      
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDV-SFLTNLPGASEKLHFFNADLSNPDSFAAAIE------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCC-HHHHTSTTHHHHEEECCCCTTCGGGGHHHHT------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHH-HHHHhhhccCCceEEEecCCCCHHHHHHHHc------
Confidence            689999999999999999999999999999888 54321111 011111   1257888999999999887775      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHH-HHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC-----------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESV-LDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS-----------  155 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~-~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~-----------  155 (255)
                       .+|+|||+|+...       .+.++ +++.+++|+.+++.+++++.+.. ..++||++||..+..+.+           
T Consensus        74 -~~d~vih~A~~~~-------~~~~~~~~~~~~~nv~gt~~l~~aa~~~~-~~~~iV~~SS~~~~~~~~~~~~~~~e~~~  144 (322)
T 2p4h_X           74 -GCVGIFHTASPID-------FAVSEPEEIVTKRTVDGALGILKACVNSK-TVKRFIYTSSGSAVSFNGKDKDVLDESDW  144 (322)
T ss_dssp             -TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTCS-SCCEEEEEEEGGGTSCSSSCCSEECTTCC
T ss_pred             -CCCEEEEcCCccc-------CCCCChHHHHHHHHHHHHHHHHHHHHhcC-CccEEEEeccHHHcccCCCCCeecCCccc
Confidence             5899999996421       11122 45689999999999999998863 246999999987543211           


Q ss_pred             -----------CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHH---HHhhcc---CCCC-
Q 025259          156 -----------AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVR---KALEGK---TLLN-  217 (255)
Q Consensus       156 -----------~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~---~~~~~~---~~~~-  217 (255)
                                 ....|+.||.+.+.+++.++.+.  +++++.+.|+++.+++...... ....   ......   .+.. 
T Consensus       145 ~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~g~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~  221 (322)
T 2p4h_X          145 SDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQN--GIDVVTLILPFIVGRFVCPKLP-DSIEKALVLVLGKKEQIGVTR  221 (322)
T ss_dssp             CCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEECEEESCCCSSSCC-HHHHHHTHHHHSCGGGCCEEE
T ss_pred             cchhhhcccCcccccHHHHHHHHHHHHHHHHHhc--CCcEEEEcCCceECCCCCCCCC-chHHHHHHHHhCCCccCcCCC
Confidence                       11169999999998888777654  8999999999999986432211 1111   111111   1111 


Q ss_pred             -CCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          218 -RLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       218 -~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                       .+..++|+|+++++++....  .+|+ ++..+
T Consensus       222 ~~~i~v~Dva~a~~~~~~~~~--~~g~-~~~~~  251 (322)
T 2p4h_X          222 FHMVHVDDVARAHIYLLENSV--PGGR-YNCSP  251 (322)
T ss_dssp             EEEEEHHHHHHHHHHHHHSCC--CCEE-EECCC
T ss_pred             cCEEEHHHHHHHHHHHhhCcC--CCCC-EEEcC
Confidence             37899999999999986532  5676 44443

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.91  E-value=6.3e-23  Score=179.11  Aligned_cols=172  Identities=20%  Similarity=0.156  Sum_probs=136.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH-HcCCeEEEEeCChhH---------HHHHHHHHHHcC-----Ce---EEEEEecCCCH
Q 025259           12 GKVAVVTASTQGIGLGVAERLG-LEGASVVISSRKQKN---------VDKAVEKLKALG-----IE---VIGIICHVSNE   73 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~-~~G~~Vv~~~r~~~~---------~~~~~~~~~~~~-----~~---~~~~~~D~~~~   73 (255)
                      +++||||||+|+||++++++|+ +.|++|++++|+...         .+.+.+.+++..     .+   +.++.+|++++
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3479999999999999999999 999999999997654         344433344331     23   78899999999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP  153 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~  153 (255)
                      +++++++++    ++++|+||||||... ..    .+.+++++.+++|+.+++.+++++...  ..++||++||...+..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~-~~----~~~~~~~~~~~~Nv~g~~~ll~a~~~~--~~~~iv~~SS~~v~g~  150 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLA-VG----ESVRDPLKYYDNNVVGILRLLQAMLLH--KCDKIIFSSSAAIFGN  150 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGTBS
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccC-cC----cchhhHHHHHHHHhHHHHHHHHHHHHh--CCCEEEEECCHHHhCC
Confidence            998877764    456999999999753 11    134567889999999999999998764  3458999999765432


Q ss_pred             CC------------------CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          154 PS------------------AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       154 ~~------------------~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                      ..                  +...|+.+|++.+.+++.++.++  +++++.+.|+++.++.
T Consensus       151 ~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          151 PTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAH  209 (397)
T ss_dssp             CCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCC
T ss_pred             CCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH--CCcEEEEeccceeCCC
Confidence            22                  25789999999999999999988  8999999999997764

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.90  E-value=1e-22  Score=176.19  Aligned_cols=225  Identities=14%  Similarity=0.042  Sum_probs=153.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHH----cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD-KAVEKLKA----LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +|++|||||+|+||++++++|+++|++|++++|+.+... +..+.+.+    .+.++.++.+|+++++++.++++.+   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999999999865421 11112211    2357888999999999999988865   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCC-----------C
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQP-----------P  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~-----------~  154 (255)
                        ++|+||||||....     ..+.+++++.+++|+.++..+++++.+... +.++||++||...+..           .
T Consensus        78 --~~d~vih~A~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~  150 (372)
T 1db3_A           78 --QPDEVYNLGAMSHV-----AVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (372)
T ss_dssp             --CCSEEEECCCCCTT-----TTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEECCcccCc-----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence              69999999997531     123445778899999999999999998753 2369999999866532           2


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC---CHHHHHHhh-ccC---------CCCCCCC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG---NDAVRKALE-GKT---------LLNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~-~~~---------~~~~~~~  221 (255)
                      .+...|+.+|++.+.+++.++.++  ++.+..+.|..+..+.......   ...+..... +..         ....+..
T Consensus       151 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  228 (372)
T 1db3_A          151 YPRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (372)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh--CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence            346789999999999999999887  4555555554443332111000   011111111 111         1124677


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      .+|+|++++.++....    ++++++.+|..
T Consensus       229 v~Dva~a~~~~~~~~~----~~~~ni~~~~~  255 (372)
T 1db3_A          229 AKDYVKMQWMMLQQEQ----PEDFVIATGVQ  255 (372)
T ss_dssp             HHHHHHHHHHTTSSSS----CCCEEECCCCC
T ss_pred             HHHHHHHHHHHHhcCC----CceEEEcCCCc
Confidence            8999999999886532    47788877754

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.90  E-value=3.8e-24  Score=172.98  Aligned_cols=203  Identities=10%  Similarity=-0.030  Sum_probs=154.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|++.|++|++++|+++..+..       ..++.++.+|++|++++.++++       ++|+
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   70 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE-------NEHLKVKKADVSSLDEVCEVCK-------GADA   70 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC-------CTTEEEECCCTTCHHHHHHHHT-------TCSE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc-------cCceEEEEecCCCHHHHHHHhc-------CCCE
Confidence            6899999999999999999999999999999998654321       2578899999999999888776       6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC----------CCChhhHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP----------SAMAMYGV  162 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~----------~~~~~y~~  162 (255)
                      |||+||... .          ..+.+++|+.++..+++++.+.-  ..++|++||..+..+.          .+...|+.
T Consensus        71 vi~~a~~~~-~----------~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~  137 (227)
T 3dhn_A           71 VISAFNPGW-N----------NPDIYDETIKVYLTIIDGVKKAG--VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPG  137 (227)
T ss_dssp             EEECCCC-----------------CCSHHHHHHHHHHHHHHHTT--CSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHH
T ss_pred             EEEeCcCCC-C----------ChhHHHHHHHHHHHHHHHHHHhC--CCEEEEeCChhhccCCCCCccccCCcchHHHHHH
Confidence            999998642 1          11268899999999999988753  3489999998765433          34678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC-----CCCCCCChHHHHHHHHHhcCCCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-----LLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +|++.+.+.+.++.+.  +++++.+.||++.++........      .....     ....+..++|+|++++.++....
T Consensus       138 sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~g~~~~~~~~~------~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~  209 (227)
T 3dhn_A          138 VKALGEFYLNFLMKEK--EIDWVFFSPAADMRPGVRTGRYR------LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK  209 (227)
T ss_dssp             HHHHHHHHHHTGGGCC--SSEEEEEECCSEEESCCCCCCCE------EESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHHHHhhcc--CccEEEEeCCcccCCCcccccee------ecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc
Confidence            9999999998887643  89999999999877643211100      00000     11346789999999999996643


Q ss_pred             CCccccEEeeCCCcc
Q 025259          238 SYITGETLVVAGGMA  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                        ..|+.+.+.+.-+
T Consensus       210 --~~g~~~~~~~~~~  222 (227)
T 3dhn_A          210 --HHQERFTIGYLEH  222 (227)
T ss_dssp             --CCSEEEEEECCSC
T ss_pred             --ccCcEEEEEeehh
Confidence              5689999877654

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.90  E-value=8.6e-23  Score=177.09  Aligned_cols=224  Identities=13%  Similarity=0.044  Sum_probs=158.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |++|||||+|+||++++++|+++|++|++++|+.+.     ++...+.+.. .+.++.++.+|++|++++.++++.+   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            689999999999999999999999999999998543     2222111111 2346888999999999999888865   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCC-----------C
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQP-----------P  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~-----------~  154 (255)
                        ++|+||||||... .    ..+.+++++.+++|+.++..+++++.+... +.++||++||...+..           .
T Consensus       102 --~~d~vih~A~~~~-~----~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~  174 (375)
T 1t2a_A          102 --KPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPF  174 (375)
T ss_dssp             --CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCC
T ss_pred             --CCCEEEECCCccc-c----cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCC
Confidence              6999999999643 1    113466888999999999999999998753 2369999999876542           2


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHH-hhccCC---------CCCCCC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKA-LEGKTL---------LNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~-~~~~~~---------~~~~~~  221 (255)
                      .+...|+.+|++.+.+++.++.++  ++++..+.|+.+..+........   ..+... .....+         ...+..
T Consensus       175 ~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~  252 (375)
T 1t2a_A          175 YPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH  252 (375)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred             CCCChhHHHHHHHHHHHHHHHHHh--CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence            356789999999999999999887  67777777766554421110000   111111 111111         123677


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      .+|+|++++.++....    ++++++.+|..
T Consensus       253 v~Dva~a~~~~~~~~~----~~~~ni~~~~~  279 (375)
T 1t2a_A          253 AKDYVEAMWLMLQNDE----PEDFVIATGEV  279 (375)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCC
T ss_pred             HHHHHHHHHHHHhcCC----CceEEEeCCCc
Confidence            8999999999886532    36788877654

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.90  E-value=4.4e-23  Score=176.65  Aligned_cols=219  Identities=19%  Similarity=0.184  Sum_probs=158.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC-------CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG-------ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      .++++++|||||+|+||++++++|++.|       ++|++++|+.+....      ..+.++.++.+|++++++++++++
T Consensus        11 ~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~   84 (342)
T 2hrz_A           11 YFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA------GFSGAVDARAADLSAPGEAEKLVE   84 (342)
T ss_dssp             CCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred             CccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc------ccCCceeEEEcCCCCHHHHHHHHh
Confidence            4678899999999999999999999999       789999998643211      124578899999999999888775


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCC-C--
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPP-S--  155 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~-~--  155 (255)
                            +++|+||||||...      ..+.+++++.+++|+.++..+++++.+..+   ..++||++||...+.+. +  
T Consensus        85 ------~~~d~vih~A~~~~------~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~  152 (342)
T 2hrz_A           85 ------ARPDVIFHLAAIVS------GEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP  152 (342)
T ss_dssp             ------TCCSEEEECCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred             ------cCCCEEEECCccCc------ccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence                  37999999999642      123467889999999999999999987542   14699999999766442 2  


Q ss_pred             --------CChhhHHhHHHHHHHHHHHHHHhCC---CcEEEEEe--CCcccChhhhhhcCCHHHHHHhh-cc---CCCCC
Q 025259          156 --------AMAMYGVTKTALLGLTKALAAEMAP---DTRVNCVA--PGFVPTHFAQALLGNDAVRKALE-GK---TLLNR  218 (255)
Q Consensus       156 --------~~~~y~~sKaa~~~l~~~la~e~~~---~i~v~~v~--pg~v~t~~~~~~~~~~~~~~~~~-~~---~~~~~  218 (255)
                              +...|+.+|++.+.+++.++.+..-   .+|++.+.  ||.+.++...-.   ..+..... ..   .+...
T Consensus       153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~  229 (342)
T 2hrz_A          153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFF---SNILREPLVGQEAVLPVPE  229 (342)
T ss_dssp             BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHH---HHHHHHHHTTCCEEECSCT
T ss_pred             cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHH---HHHHHHHhcCCCeeccCCC
Confidence                    5678999999999999999887532   46777777  887654321100   11111111 11   11221


Q ss_pred             -----CCChHHHHHHHHHhcCCCCC-CccccEEeeC
Q 025259          219 -----LGTTGNMAAAIAFLASDDAS-YITGETLVVA  248 (255)
Q Consensus       219 -----~~~~~~va~~~~~l~s~~~~-~~~G~~i~~d  248 (255)
                           +..++|+|++++.++..... ...|+++++.
T Consensus       230 ~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~  265 (342)
T 2hrz_A          230 SIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMP  265 (342)
T ss_dssp             TCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECC
T ss_pred             ccceeeEehHHHHHHHHHHHhccccccCCccEEEcC
Confidence                 46789999999988754321 0136788884

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.90  E-value=2.9e-23  Score=175.83  Aligned_cols=211  Identities=17%  Similarity=0.104  Sum_probs=128.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++++|||||+|+||++++++|+++|++|++++|+.+.           . +  ++.+|+++++++.++++..     ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d   62 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-----------P-K--FEQVNLLDSNAVHHIIHDF-----QPH   62 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------------CHHHHHHH-----CCS
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-----------C-C--eEEecCCCHHHHHHHHHhh-----CCC
Confidence            5789999999999999999999999999999987543           1 1  6789999999988888764     699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC----------CCCChhhH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP----------PSAMAMYG  161 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~----------~~~~~~y~  161 (255)
                      +||||||... .    +.+.+++++.+++|+.++..+++++.+.   +.++|++||...+.+          ..+...|+
T Consensus        63 ~vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~  134 (315)
T 2ydy_A           63 VIVHCAAERR-P----DVVENQPDAASQLNVDASGNLAKEAAAV---GAFLIYISSDYVFDGTNPPYREEDIPAPLNLYG  134 (315)
T ss_dssp             EEEECC------------------------CHHHHHHHHHHHHH---TCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHH
T ss_pred             EEEECCcccC-h----hhhhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHH
Confidence            9999999753 1    2245678899999999999999999874   249999999887644          34567899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhh--c------cCCCCCCCChHHHHHHHHHhc
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALE--G------KTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~va~~~~~l~  233 (255)
                      .+|++.+.+++.++.++ ..+|++.|. |+..++.. ..  ...+.....  .      ......+..++|+|+++++++
T Consensus       135 ~sK~~~e~~~~~~~~~~-~~lR~~~v~-G~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~  209 (315)
T 2ydy_A          135 KTKLDGEKAVLENNLGA-AVLRIPILY-GEVEKLEE-SA--VTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLA  209 (315)
T ss_dssp             HHHHHHHHHHHHHCTTC-EEEEECSEE-CSCSSGGG-ST--TGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCe-EEEeeeeee-CCCCcccc-cH--HHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHH
Confidence            99999999999874322 145666666 55554210 11  011111111  1      123346788999999999988


Q ss_pred             CCC-CCCccccEEeeCCCccCC
Q 025259          234 SDD-ASYITGETLVVAGGMASR  254 (255)
Q Consensus       234 s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      ... .....|+++++.+|...+
T Consensus       210 ~~~~~~~~~~~~~~i~~~~~~s  231 (315)
T 2ydy_A          210 EKRMLDPSIKGTFHWSGNEQMT  231 (315)
T ss_dssp             HHHHTCTTCCEEEECCCSCCBC
T ss_pred             HhhccccCCCCeEEEcCCCccc
Confidence            642 123468999999987543

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.90  E-value=8.2e-23  Score=174.40  Aligned_cols=224  Identities=13%  Similarity=0.011  Sum_probs=158.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD-KAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++||||||+|+||++++++|++.|++|++++|+.+... ...+.+. .+.++.++.+|+++++++.++++.+     +
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~   86 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----Q   86 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc-ccCceEEEECCCCCHHHHHHHHHHc-----C
Confidence            4789999999999999999999999999999999865421 1111111 1346888999999999999888865     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCCh
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMA  158 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~  158 (255)
                      +|+|||+||... .    +.+.+++++.+++|+.++..+++++.+.-. .+++|++||...+.+.           .+..
T Consensus        87 ~d~Vih~A~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~  160 (335)
T 1rpn_A           87 PQEVYNLAAQSF-V----GASWNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLIQAERQDENTPFYPRS  160 (335)
T ss_dssp             CSEEEECCSCCC-H----HHHTTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             CCEEEECccccc-h----hhhhhChHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeCHHHhCCCCCCCCCcccCCCCCC
Confidence            999999999643 1    011234678899999999999999987521 2699999997665332           2356


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHHh-hccCC---------CCCCCChHHH
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKAL-EGKTL---------LNRLGTTGNM  225 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~-~~~~~---------~~~~~~~~~v  225 (255)
                      .|+.+|.+.+.+++.++.++  ++++..+.|+.+..+........   ..+.... ....+         ...+...+|+
T Consensus       161 ~Y~~sK~~~e~~~~~~~~~~--~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dv  238 (335)
T 1rpn_A          161 PYGVAKLYGHWITVNYRESF--GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDY  238 (335)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHc--CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHH
Confidence            89999999999999999887  67777888887766532211000   1111111 12111         1125677999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          226 AAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      |++++.++....    ++++++.+|..
T Consensus       239 a~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          239 VEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             HHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHHHhcCC----CCEEEEeCCCC
Confidence            999999886542    47888887754

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.90  E-value=4.2e-23  Score=178.79  Aligned_cols=222  Identities=11%  Similarity=0.069  Sum_probs=165.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   85 (255)
                      ..+++++||||||+|+||++++++|++. |++|++++|+.+..+....     ..++.++.+|++ +++.+.++++    
T Consensus        20 ~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-----~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           20 GSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-----HERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             ---CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-----STTEEEEECCTTTCHHHHHHHHH----
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-----CCCeEEEeCccCCCHHHHHHHhc----
Confidence            4466789999999999999999999998 9999999998765433211     247889999999 9999888876    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------  154 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------  154 (255)
                         ++|+|||+|+... ..    ...++..+.+++|+.++..+++++...-   .++|++||...+...           
T Consensus        91 ---~~d~Vih~A~~~~-~~----~~~~~~~~~~~~nv~~~~~ll~a~~~~~---~~~v~~SS~~vyg~~~~~~~~e~~~~  159 (372)
T 3slg_A           91 ---KCDVILPLVAIAT-PA----TYVKQPLRVFELDFEANLPIVRSAVKYG---KHLVFPSTSEVYGMCADEQFDPDASA  159 (372)
T ss_dssp             ---HCSEEEECBCCCC-HH----HHHHCHHHHHHHHTTTTHHHHHHHHHHT---CEEEEECCGGGGBSCCCSSBCTTTCC
T ss_pred             ---cCCEEEEcCcccc-HH----HHhhCHHHHHHHHHHHHHHHHHHHHHhC---CcEEEeCcHHHhCCCCCCCCCccccc
Confidence               5999999999754 11    1234567889999999999999998753   599999997654321           


Q ss_pred             -------CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC--------CHHHHHHhhccCC----
Q 025259          155 -------SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG--------NDAVRKALEGKTL----  215 (255)
Q Consensus       155 -------~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~--------~~~~~~~~~~~~~----  215 (255)
                             .+...|+.+|.+.+.+++.++.+   ++++..+.|+.+.++.....+.        ...+........+    
T Consensus       160 ~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (372)
T 3slg_A          160 LTYGPINKPRWIYACSKQLMDRVIWGYGME---GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLV  236 (372)
T ss_dssp             EEECCTTCTTHHHHHHHHHHHHHHHHHHTT---TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEG
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHC---CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEe
Confidence                   23447999999999999999877   7999999999998775332110        0112222222211    


Q ss_pred             -----CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC-Ccc
Q 025259          216 -----LNRLGTTGNMAAAIAFLASDDASYITGETLVVAG-GMA  252 (255)
Q Consensus       216 -----~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg-G~~  252 (255)
                           ...+...+|+|++++.++........|+++++.+ |..
T Consensus       237 ~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  279 (372)
T 3slg_A          237 DGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNN  279 (372)
T ss_dssp             GGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCE
T ss_pred             CCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCC
Confidence                 1246678999999999997655446799999998 544

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.90  E-value=7.5e-24  Score=182.61  Aligned_cols=221  Identities=14%  Similarity=0.173  Sum_probs=157.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++++|||||+|+||++++++|++.| +.|++++|+.+..+  ...+.  +  +. +.+|+++++.++.+++.  ..
T Consensus        42 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~--~--~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           42 SGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLV--D--LN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             ------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--GGGTT--T--SC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--hhccc--C--ce-EeeecCcHHHHHHHHhh--cc
Confidence            35678999999999999999999999999 89999999865421  01111  1  12 67899999888877653  12


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC-----------
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS-----------  155 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~-----------  155 (255)
                      ++++|+|||+||... .      +.+++++.+++|+.++..+++++.+.  .. ++|++||...+...+           
T Consensus       113 ~~~~d~Vih~A~~~~-~------~~~~~~~~~~~n~~~~~~ll~a~~~~--~~-r~V~~SS~~v~g~~~~~~~~E~~~~~  182 (357)
T 2x6t_A          113 FGDVEAIFHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEK  182 (357)
T ss_dssp             CSSCCEEEECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred             cCCCCEEEECCcccC-C------ccCCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence            457999999999754 1      22346788999999999999999874  33 899999987654332           


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh--cC--CHHHHHHhhccC---------C-CCCCCC
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL--LG--NDAVRKALEGKT---------L-LNRLGT  221 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~--~~--~~~~~~~~~~~~---------~-~~~~~~  221 (255)
                      +...|+.+|.+.+.+++.++.++  +++++.+.|+++.++.....  ..  ...+........         . ...+..
T Consensus       183 p~~~Y~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  260 (357)
T 2x6t_A          183 PLNVFGYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  260 (357)
T ss_dssp             CSSHHHHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc--CCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEE
Confidence            35689999999999999998775  79999999999987643210  00  011222222211         1 234578


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++|+|+++++++....    |+++++.+|...
T Consensus       261 v~Dva~ai~~~~~~~~----~~~~~i~~~~~~  288 (357)
T 2x6t_A          261 VGDVADVNLWFLENGV----SGIFNLGTGRAE  288 (357)
T ss_dssp             HHHHHHHHHHHHHHCC----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHHHhcCC----CCeEEecCCCcc
Confidence            8999999999986543    889999988643

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.90  E-value=2.2e-23  Score=172.70  Aligned_cols=192  Identities=15%  Similarity=0.128  Sum_probs=148.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||+|+||++++++|++.|++|++++|+.+...         ..++.++.+|+++++++.++++       ++|+
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~-------~~d~   66 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA---------EAHEEIVACDLADAQAVHDLVK-------DCDG   66 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC---------CTTEEECCCCTTCHHHHHHHHT-------TCSE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc---------CCCccEEEccCCCHHHHHHHHc-------CCCE
Confidence            57999999999999999999999999999999875311         1246889999999999888776       5999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC------------CChhh
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS------------AMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~------------~~~~y  160 (255)
                      ||||||...         .+++++.+++|+.++..+++++.+.  ..++||++||...+.+.+            +...|
T Consensus        67 vi~~a~~~~---------~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y  135 (267)
T 3ay3_A           67 IIHLGGVSV---------ERPWNDILQANIIGAYNLYEAARNL--GKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLY  135 (267)
T ss_dssp             EEECCSCCS---------CCCHHHHHHHTHHHHHHHHHHHHHT--TCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHH
T ss_pred             EEECCcCCC---------CCCHHHHHHHHHHHHHHHHHHHHHh--CCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChH
Confidence            999999742         1346788999999999999999874  346999999987664322            35789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCccc-ChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVP-THFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      +.+|++.+.+++.++.+.  +++++.+.||++. ++.      ....         ...+..++|+|+++..++..... 
T Consensus       136 ~~sK~~~e~~~~~~~~~~--gi~~~~lrp~~v~~~~~------~~~~---------~~~~~~~~dva~~~~~~~~~~~~-  197 (267)
T 3ay3_A          136 GLSKCFGEDLASLYYHKF--DIETLNIRIGSCFPKPK------DARM---------MATWLSVDDFMRLMKRAFVAPKL-  197 (267)
T ss_dssp             HHHHHHHHHHHHHHHHTT--CCCEEEEEECBCSSSCC------SHHH---------HHHBCCHHHHHHHHHHHHHSSCC-
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeceeecCCCC------CCCe---------eeccccHHHHHHHHHHHHhCCCC-
Confidence            999999999999987654  8999999999984 332      1110         12367899999999998865422 


Q ss_pred             ccccEEeeCCC
Q 025259          240 ITGETLVVAGG  250 (255)
Q Consensus       240 ~~G~~i~~dgG  250 (255)
                       .+.++.+.++
T Consensus       198 -~~~~~~~~~~  207 (267)
T 3ay3_A          198 -GCTVVYGASA  207 (267)
T ss_dssp             -CEEEEEECCS
T ss_pred             -CceeEecCCC
Confidence             2345555444

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.89  E-value=1.1e-22  Score=174.00  Aligned_cols=217  Identities=13%  Similarity=0.060  Sum_probs=159.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~~   90 (255)
                      +++|||||+|+||++++++|+++ |++|++++|+.+..+...     ...++.++.+|+++. +.++++++       ++
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~-------~~   68 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK-------KC   68 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH-------HC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh-----cCCCeEEEeccccCcHHHHHhhcc-------CC
Confidence            47999999999999999999998 899999999876543221     124688899999984 55666655       58


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC---------------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS---------------  155 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~---------------  155 (255)
                      |+|||+||... ..    ...+++++.+++|+.++..+++++.+.-   .++|++||...+...+               
T Consensus        69 d~vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~  140 (345)
T 2bll_A           69 DVVLPLVAIAT-PI----EYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGP  140 (345)
T ss_dssp             SEEEECBCCCC-HH----HHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCCCSSBCTTTCCCBCCC
T ss_pred             CEEEEcccccC-cc----chhcCHHHHHHHHHHHHHHHHHHHHHhC---CeEEEEecHHHcCCCCCCCcCCcccccccCc
Confidence            99999999743 11    1134577889999999999999998742   6999999976653211               


Q ss_pred             ---CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc----C-C---HHHHHHhhccCC---------
Q 025259          156 ---AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL----G-N---DAVRKALEGKTL---------  215 (255)
Q Consensus       156 ---~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~----~-~---~~~~~~~~~~~~---------  215 (255)
                         +...|+.+|.+.+.+++.++.+.  +++++.+.|+.+.++......    . .   ..+........+         
T Consensus       141 ~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  218 (345)
T 2bll_A          141 VNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ  218 (345)
T ss_dssp             TTCGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCC
T ss_pred             ccCcccccHHHHHHHHHHHHHHHHhc--CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCE
Confidence               12379999999999999999876  799999999999877532110    0 0   112222221111         


Q ss_pred             CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          216 LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 ~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      ...+..++|+|++++.++.......+|+++++.+|.
T Consensus       219 ~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~  254 (345)
T 2bll_A          219 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  254 (345)
T ss_dssp             EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTT
T ss_pred             EEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCCC
Confidence            123678899999999998765444679999999884

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.89  E-value=2e-22  Score=171.69  Aligned_cols=221  Identities=15%  Similarity=0.112  Sum_probs=160.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +++|||||+|+||++++++|++.|++|++++|+.....+      ....++.++.+|+++++++++++++     .++|+
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~   70 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AITEGAKFYNGDLRDKAFLRDVFTQ-----ENIEA   70 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GSCTTSEEEECCTTCHHHHHHHHHH-----SCEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hcCCCcEEEECCCCCHHHHHHHHhh-----cCCCE
Confidence            579999999999999999999999999999987543221      1122577889999999998888775     37999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~  161 (255)
                      |||+||... ..    .+.+++++.+++|+.++..+++++...  ..+++|++||...+..           ..+...|+
T Consensus        71 vih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~  143 (330)
T 2c20_A           71 VMHFAADSL-VG----VSMEKPLQYYNNNVYGALCLLEVMDEF--KVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYG  143 (330)
T ss_dssp             EEECCCCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHH
T ss_pred             EEECCcccC-cc----ccccCHHHHHHHHhHHHHHHHHHHHHc--CCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHH
Confidence            999999753 11    134567889999999999999998764  3358999999876532           23467899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc------CC---HHHHHHhhccCC----------------C
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL------GN---DAVRKALEGKTL----------------L  216 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~------~~---~~~~~~~~~~~~----------------~  216 (255)
                      .+|.+.+.+++.++.++  +++++.+.|+.+.++.....+      ..   +.+........+                .
T Consensus       144 ~sK~~~e~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~  221 (330)
T 2c20_A          144 ETKLAIEKMLHWYSQAS--NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI  221 (330)
T ss_dssp             HHHHHHHHHHHHHHHTS--SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred             HHHHHHHHHHHHHHHHh--CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence            99999999999999876  799999999998876421111      01   112221211111                1


Q ss_pred             CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+...+|+|++++.++........|+++++.+|...
T Consensus       222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  258 (330)
T 2c20_A          222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGF  258 (330)
T ss_dssp             ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCB
T ss_pred             EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCc
Confidence            1345689999999988754222223689999877643

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.89  E-value=3.4e-22  Score=169.09  Aligned_cols=209  Identities=16%  Similarity=0.104  Sum_probs=156.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .+++|||||+|+||++++++|+++|++|++++|+++..+     ++    ++.++.+|++ ++++.++++       ++|
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~----~~~~~~~Dl~-~~~~~~~~~-------~~d   64 (311)
T 3m2p_A            2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-----IN----DYEYRVSDYT-LEDLINQLN-------DVD   64 (311)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC--------------CCEEEECCCC-HHHHHHHTT-------TCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-----CC----ceEEEEcccc-HHHHHHhhc-------CCC
Confidence            368999999999999999999999999999999844322     11    5778999999 888877765       799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y  160 (255)
                      +|||+|+.....         +.++.+++|+.++..+++++...-  ..++|++||...+..           ..+...|
T Consensus        65 ~Vih~a~~~~~~---------~~~~~~~~n~~~~~~ll~a~~~~~--~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (311)
T 3m2p_A           65 AVVHLAATRGSQ---------GKISEFHDNEILTQNLYDACYENN--ISNIVYASTISAYSDETSLPWNEKELPLPDLMY  133 (311)
T ss_dssp             EEEECCCCCCSS---------SCGGGTHHHHHHHHHHHHHHHHTT--CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHH
T ss_pred             EEEEccccCCCC---------ChHHHHHHHHHHHHHHHHHHHHcC--CCEEEEEccHHHhCCCCCCCCCCCCCCCCCchh
Confidence            999999976421         345578999999999999998753  348999999766532           2345789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC---------CCCCCChHHHHHHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL---------LNRLGTTGNMAAAIAF  231 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~va~~~~~  231 (255)
                      +.+|.+.+.+++.++.+.  ++++..+.|+.+.++..........+........+         ...+...+|+|+++..
T Consensus       134 ~~sK~~~E~~~~~~~~~~--g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~  211 (311)
T 3m2p_A          134 GVSKLACEHIGNIYSRKK--GLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIY  211 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHS--CCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHc--CCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHH
Confidence            999999999999999875  89999999999987654321111222233222211         1235667899999999


Q ss_pred             hcCCCCCCccccEEeeCCCccC
Q 025259          232 LASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++....   .|+++++.+|...
T Consensus       212 ~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          212 ALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HTTCTT---CCEEEEECCSCEE
T ss_pred             HHhcCC---CCCeEEeCCCCcc
Confidence            997654   7899999988654

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.89  E-value=5.4e-22  Score=169.57  Aligned_cols=226  Identities=14%  Similarity=0.115  Sum_probs=153.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||+|+||++++++|+++|++|++++|......+..+.+.+ .+.++.++.+|++++++++++++..     ++|+
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D~   76 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhcc-----CCCE
Confidence            699999999999999999999999999988743221112222322 1446778899999999988887652     6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CC-CCChhh
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PP-SAMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~-~~~~~y  160 (255)
                      ||||||... ..    ...++.++.+++|+.+++.+++++...  ..++||++||...+.           +. ++...|
T Consensus        77 vih~A~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y  149 (338)
T 1udb_A           77 VIHFAGLKA-VG----ESVQKPLEYYDNNVNGTLRLISAMRAA--NVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPY  149 (338)
T ss_dssp             EEECCSCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHH
T ss_pred             EEECCccCc-cc----cchhcHHHHHHHHHHHHHHHHHHHHhc--CCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChH
Confidence            999999643 11    123446778999999999999987653  346899999986542           11 236789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh--------cCC--HHHHHHhh-ccC---------------
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL--------LGN--DAVRKALE-GKT---------------  214 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~--------~~~--~~~~~~~~-~~~---------------  214 (255)
                      +.+|++.+.+++.++.+. +++++..+.|+.+..+.....        ...  +.+..... ...               
T Consensus       150 ~~sK~~~e~~~~~~~~~~-~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~  228 (338)
T 1udb_A          150 GKSKLMVEQILTDLQKAQ-PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHS-TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred             HHHHHHHHHHHHHHHHhc-CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence            999999999999999884 368888888766544311000        000  11111111 111               


Q ss_pred             CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          215 LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       215 ~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ....+...+|+|++++.++........++++++.+|..
T Consensus       229 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~  266 (338)
T 1udb_A          229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCC
T ss_pred             eeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCc
Confidence            01135678999999888774321112347899887754

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.88  E-value=1.1e-23  Score=180.14  Aligned_cols=215  Identities=16%  Similarity=0.106  Sum_probs=146.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH--HHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA--VEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|++|||||+|+||++++++|+++|++|+++.|+.+..++.  ...+. ...++.++.+|++|++++.++++       +
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-------~   80 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIA-------G   80 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHT-------T
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHc-------C
Confidence            68999999999999999999999999999988876543211  11222 23468889999999988877765       5


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----C----C------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----P----P------  154 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----~----~------  154 (255)
                      +|+|||+|+... .   .  ..+..++.+++|+.+++.+++++.+.. ..++||++||..+..     +    .      
T Consensus        81 ~D~Vih~A~~~~-~---~--~~~~~~~~~~~nv~gt~~ll~aa~~~~-~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~  153 (338)
T 2rh8_A           81 CDFVFHVATPVH-F---A--SEDPENDMIKPAIQGVVNVMKACTRAK-SVKRVILTSSAAAVTINQLDGTGLVVDEKNWT  153 (338)
T ss_dssp             CSEEEEESSCCC-C--------------CHHHHHHHHHHHHHHHHCT-TCCEEEEECCHHHHHHHHHTCSCCCCCTTTTT
T ss_pred             CCEEEEeCCccC-C---C--CCCcHHHHHHHHHHHHHHHHHHHHHcC-CcCEEEEEecHHHeecCCcCCCCcccChhhcc
Confidence            899999998542 1   1  112234589999999999999998864 235999999976321     0    0      


Q ss_pred             ------C---CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHH---Hhhcc---------
Q 025259          155 ------S---AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRK---ALEGK---------  213 (255)
Q Consensus       155 ------~---~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~---~~~~~---------  213 (255)
                            +   ....|+.||.+.+.+++.++.+.  +++++.+.|+.+.++....... .....   .....         
T Consensus       154 ~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~~lrp~~v~Gp~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~  230 (338)
T 2rh8_A          154 DIEFLTSAKPPTWGYPASKTLAEKAAWKFAEEN--NIDLITVIPTLMAGSSLTSDVP-SSIGLAMSLITGNEFLINGMKG  230 (338)
T ss_dssp             CC-------CCCCCCTTSCCHHHHHHHHHHHHH--TCCEEEEEECEEESCCSSSSCC-HHHHHHHHHHHTCHHHHHHHHH
T ss_pred             chhhccccCCccchHHHHHHHHHHHHHHHHHHc--CCcEEEEeCCceECCCCCCCCC-chHHHHHHHHcCCccccccccc
Confidence                  0   11159999999999998887655  8999999999999886432211 11000   00000         


Q ss_pred             ----CCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          214 ----TLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       214 ----~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                          .....+..++|+|++++++++..  ...|..+.
T Consensus       231 ~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~  265 (338)
T 2rh8_A          231 MQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYIC  265 (338)
T ss_dssp             HHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEE
T ss_pred             cccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEE
Confidence                00014789999999999998643  23455433

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.88  E-value=1.4e-22  Score=169.90  Aligned_cols=198  Identities=14%  Similarity=0.127  Sum_probs=147.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .-..+++|||||+|+||++++++|+++|++|++++|+                     .+|++|+++++++++..     
T Consensus         9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~Dl~d~~~~~~~~~~~-----   62 (292)
T 1vl0_A            9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ---------------------DLDITNVLAVNKFFNEK-----   62 (292)
T ss_dssp             ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT---------------------TCCTTCHHHHHHHHHHH-----
T ss_pred             ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc---------------------cCCCCCHHHHHHHHHhc-----
Confidence            3457899999999999999999999999999999996                     28999999998888765     


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC-----------CC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS-----------AM  157 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~-----------~~  157 (255)
                      ++|+|||+||... .    +.+.+++++.+++|+.++..+++++.+.  . .++|++||...+.+.+           +.
T Consensus        63 ~~d~vih~A~~~~-~----~~~~~~~~~~~~~nv~~~~~l~~a~~~~--~-~~iv~~SS~~v~~~~~~~~~~E~~~~~~~  134 (292)
T 1vl0_A           63 KPNVVINCAAHTA-V----DKCEEQYDLAYKINAIGPKNLAAAAYSV--G-AEIVQISTDYVFDGEAKEPITEFDEVNPQ  134 (292)
T ss_dssp             CCSEEEECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHH--T-CEEEEEEEGGGSCSCCSSCBCTTSCCCCC
T ss_pred             CCCEEEECCccCC-H----HHHhcCHHHHHHHHHHHHHHHHHHHHHc--C-CeEEEechHHeECCCCCCCCCCCCCCCCc
Confidence            7999999999643 1    1234668899999999999999999874  2 3999999987654322           45


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC-------CCCCCCChHHHHHHHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-------LLNRLGTTGNMAAAIA  230 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~va~~~~  230 (255)
                      ..|+.+|.+.+.+++.++.      ++..+.|+.+.++ ....  ...+........       ....+..++|+|+++.
T Consensus       135 ~~Y~~sK~~~E~~~~~~~~------~~~~lR~~~v~G~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~  205 (292)
T 1vl0_A          135 SAYGKTKLEGENFVKALNP------KYYIVRTAWLYGD-GNNF--VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVL  205 (292)
T ss_dssp             SHHHHHHHHHHHHHHHHCS------SEEEEEECSEESS-SSCH--HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhhCC------CeEEEeeeeeeCC-CcCh--HHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHH
Confidence            7899999999999987643      3556666666544 1111  011222211111       1245678999999999


Q ss_pred             HhcCCCCCCccccEEeeCCCccC
Q 025259          231 FLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++++..    +|+++++.+|...
T Consensus       206 ~~~~~~----~~~~~~i~~~~~~  224 (292)
T 1vl0_A          206 KVIDEK----NYGTFHCTCKGIC  224 (292)
T ss_dssp             HHHHHT----CCEEEECCCBSCE
T ss_pred             HHHhcC----CCcEEEecCCCCc
Confidence            998764    6899999988643

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.88  E-value=4.8e-22  Score=184.51  Aligned_cols=220  Identities=12%  Similarity=0.039  Sum_probs=163.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH-HHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH-RKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~   87 (255)
                      ++++++|||||+|+||++++++|++. |++|++++|+.+..+...     ...++.++.+|++++++ ++++++      
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~-----~~~~v~~v~~Dl~d~~~~~~~~~~------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGT-----TCTTEEEEECCTTTCHHHHHHHHH------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhc-----cCCceEEEECCCCCcHHHHHHhhc------
Confidence            46789999999999999999999998 899999999876543211     13468889999998764 555554      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-------------
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-------------  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-------------  154 (255)
                       ++|+|||+||... ..    ...+++++.+++|+.++..+++++.+.-   .++|++||...+...             
T Consensus       382 -~~D~Vih~Aa~~~-~~----~~~~~~~~~~~~Nv~gt~~ll~aa~~~~---~r~V~~SS~~vyg~~~~~~~~E~~~~~~  452 (660)
T 1z7e_A          382 -KCDVVLPLVAIAT-PI----EYTRNPLRVFELDFEENLRIIRYCVKYR---KRIIFPSTSEVYGMCSDKYFDEDHSNLI  452 (660)
T ss_dssp             -HCSEEEECCCCCC-TH----HHHHSHHHHHHHHTHHHHHHHHHHHHTT---CEEEEECCGGGGBTCCSSSBCTTTCCEE
T ss_pred             -CCCEEEECceecC-cc----ccccCHHHHHHhhhHHHHHHHHHHHHhC---CEEEEEecHHHcCCCCCcccCCCccccc
Confidence             5899999999753 11    1234577899999999999999998752   699999998765321             


Q ss_pred             -----CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc------C--CHHHHHHhhccCC------
Q 025259          155 -----SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL------G--NDAVRKALEGKTL------  215 (255)
Q Consensus       155 -----~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~------~--~~~~~~~~~~~~~------  215 (255)
                           .+...|+.+|.+.+.+++.++.+.  +++++.+.||.+.++......      .  ...+........+      
T Consensus       453 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~  530 (660)
T 1z7e_A          453 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDG  530 (660)
T ss_dssp             ECCTTCTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGG
T ss_pred             cCcccCCCCCcHHHHHHHHHHHHHHHHHc--CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCC
Confidence                 123379999999999999998876  899999999999887542110      0  1122222222222      


Q ss_pred             ---CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          216 ---LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       216 ---~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                         ...+..++|+|+++++++.......+|+++++++|.
T Consensus       531 g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~  569 (660)
T 1z7e_A          531 GKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPE  569 (660)
T ss_dssp             GCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGG
T ss_pred             CCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCC
Confidence               123677899999999998765445679999999984

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.87  E-value=2.8e-22  Score=171.81  Aligned_cols=220  Identities=12%  Similarity=0.039  Sum_probs=153.3

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +...++++++|||||+|+||++++++|++.|+.|++++|+.....+....+. ...++.++.+|++++.           
T Consensus        21 ~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~-----------   88 (343)
T 2b69_A           21 GHMEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEPL-----------   88 (343)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSCC-----------
T ss_pred             cccccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc-cCCceEEEeCccCChh-----------
Confidence            3345778999999999999999999999999999999987532211111111 1346888999998752           


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-------------
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-------------  152 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-------------  152 (255)
                       +.++|+|||+||... ....    .+++++.+++|+.++..+++++.+.   +.++|++||...+.             
T Consensus        89 -~~~~d~vih~A~~~~-~~~~----~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~v~g~~~~~~~~E~~~~  159 (343)
T 2b69_A           89 -YIEVDQIYHLASPAS-PPNY----MYNPIKTLKTNTIGTLNMLGLAKRV---GARLLLASTSEVYGDPEVHPQSEDYWG  159 (343)
T ss_dssp             -CCCCSEEEECCSCCS-HHHH----TTCHHHHHHHHHHHHHHHHHHHHHH---TCEEEEEEEGGGGBSCSSSSBCTTCCC
T ss_pred             -hcCCCEEEECccccC-chhh----hhCHHHHHHHHHHHHHHHHHHHHHh---CCcEEEECcHHHhCCCCCCCCcccccc
Confidence             357999999999743 1111    1235678999999999999999874   23899999976542             


Q ss_pred             ---CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCC---------CCC
Q 025259          153 ---PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTL---------LNR  218 (255)
Q Consensus       153 ---~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~  218 (255)
                         +..+...|+.+|++.+.+++.++.+.  +++++.+.|+.+.++........  ..+........+         ...
T Consensus       160 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (343)
T 2b69_A          160 HVNPIGPRACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA  237 (343)
T ss_dssp             BCCSSSTTHHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEE
T ss_pred             cCCCCCCCCchHHHHHHHHHHHHHHHHHh--CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEe
Confidence               23345679999999999999998876  89999999999988753211111  112222211111         123


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +..++|+|++++.++...    .|+++++.+|..
T Consensus       238 ~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          238 FQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             CEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             eEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence            668899999999998653    267889988764

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.87  E-value=1.1e-21  Score=158.04  Aligned_cols=198  Identities=17%  Similarity=0.087  Sum_probs=139.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+++|++|++++|+++.++..      ...++.++.+|++|+++         +.+.++|+|
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~------~~~~~~~~~~D~~d~~~---------~~~~~~d~v   66 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR------LGATVATLVKEPLVLTE---------ADLDSVDAV   66 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH------TCTTSEEEECCGGGCCH---------HHHTTCSEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc------cCCCceEEecccccccH---------hhcccCCEE
Confidence            599999999999999999999999999999998765543      12467889999999887         223479999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC--------------Chh
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA--------------MAM  159 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~--------------~~~  159 (255)
                      |||||... ...           ...+|+.++..+++++...   ++++|++||..+..+.+.              ...
T Consensus        67 i~~ag~~~-~~~-----------~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (224)
T 3h2s_A           67 VDALSVPW-GSG-----------RGYLHLDFATHLVSLLRNS---DTLAVFILGSASLAMPGADHPMILDFPESAASQPW  131 (224)
T ss_dssp             EECCCCCT-TSS-----------CTHHHHHHHHHHHHTCTTC---CCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTT
T ss_pred             EECCccCC-Ccc-----------hhhHHHHHHHHHHHHHHHc---CCcEEEEecceeeccCCCCccccccCCCCCccchh
Confidence            99999751 111           1356777776666665543   279999999876654433              678


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+.+|++.+.+ +.+   ... +++++.|.||++.++.....+...  ............+..++|+|+++++++.... 
T Consensus       132 y~~sK~~~e~~-~~~---~~~~~i~~~ivrp~~v~g~~~~~~~~~~--~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-  204 (224)
T 3h2s_A          132 YDGALYQYYEY-QFL---QMNANVNWIGISPSEAFPSGPATSYVAG--KDTLLVGEDGQSHITTGNMALAILDQLEHPT-  204 (224)
T ss_dssp             HHHHHHHHHHH-HHH---TTCTTSCEEEEEECSBCCCCCCCCEEEE--SSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-
T ss_pred             hHHHHHHHHHH-HHH---HhcCCCcEEEEcCccccCCCcccCceec--ccccccCCCCCceEeHHHHHHHHHHHhcCcc-
Confidence            99999999854 222   223 899999999999876211110000  0000001122457899999999999996643 


Q ss_pred             CccccEEeeCC
Q 025259          239 YITGETLVVAG  249 (255)
Q Consensus       239 ~~~G~~i~~dg  249 (255)
                       ..|+++.+.|
T Consensus       205 -~~g~~~~~~~  214 (224)
T 3h2s_A          205 -AIRDRIVVRD  214 (224)
T ss_dssp             -CTTSEEEEEE
T ss_pred             -ccCCEEEEec
Confidence             4588888754

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.87  E-value=2.6e-23  Score=166.55  Aligned_cols=197  Identities=12%  Similarity=0.041  Sum_probs=148.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++++||||+|+||++++++|+++|+  +|++++|+++.          ...++.++.+|+++++++.+++        
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~----------~~~~~~~~~~D~~~~~~~~~~~--------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPRLDNPVGPLAELLPQLDGS--------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTTEECCBSCHHHHGGGCCSC--------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc----------cCCCceEEeccccCHHHHHHhh--------
Confidence            468999999999999999999999998  89999998764          1346788899999887765543        


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                       +|++|||+|... .      +.+++++.+++|+.++..+++++.+.  ..+++|++||...+.+  +...|+.+|++++
T Consensus        66 -~d~vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~Ss~~~~~~--~~~~y~~sK~~~e  133 (215)
T 2a35_A           66 -IDTAFCCLGTTI-K------EAGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAK--SSIFYNRVKGELE  133 (215)
T ss_dssp             -CSEEEECCCCCH-H------HHSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHHHH
T ss_pred             -hcEEEECeeecc-c------cCCCHHHHHHhhHHHHHHHHHHHHHc--CCCEEEEECCcccCCC--CccHHHHHHHHHH
Confidence             899999999643 1      13457888999999999999998875  3358999999877643  4568999999999


Q ss_pred             HHHHHHHHHhCCCcE-EEEEeCCcccChhhhhhcCCHHHHHHhh-ccCC----CCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          169 GLTKALAAEMAPDTR-VNCVAPGFVPTHFAQALLGNDAVRKALE-GKTL----LNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~~i~-v~~v~pg~v~t~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      .+++.+      +++ ++.+.||++.++......     .+... ...+    ...+..++|+|+++..++....    +
T Consensus       134 ~~~~~~------~~~~~~~vrp~~v~g~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~----~  198 (215)
T 2a35_A          134 QALQEQ------GWPQLTIARPSLLFGPREEFRL-----AEILAAPIARILPGKYHGIEACDLARALWRLALEEG----K  198 (215)
T ss_dssp             HHHTTS------CCSEEEEEECCSEESTTSCEEG-----GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC----S
T ss_pred             HHHHHc------CCCeEEEEeCceeeCCCCcchH-----HHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC----C
Confidence            988642      788 999999999887532110     00000 0011    1124577999999999997653    6


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      +.+++.++..
T Consensus       199 ~~~~i~~~~~  208 (215)
T 2a35_A          199 GVRFVESDEL  208 (215)
T ss_dssp             EEEEEEHHHH
T ss_pred             CceEEcHHHH
Confidence            7888776643

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=3.2e-21  Score=154.83  Aligned_cols=202  Identities=13%  Similarity=0.056  Sum_probs=134.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|+||++++++|+++|++|++++|+++.++...       .++.++.+|++|+++  +       .+.++|+|
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~--~-------~~~~~d~v   65 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL--S-------DLSDQNVV   65 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH--H-------HHTTCSEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh--h-------hhcCCCEE
Confidence            5999999999999999999999999999999987655432       457889999999887  2       23479999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC------------CChhhH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS------------AMAMYG  161 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~------------~~~~y~  161 (255)
                      |||||... .             ...+|+.++..+++++...  ..+++|++||..+..+.+            +...|+
T Consensus        66 i~~ag~~~-~-------------~~~~~~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~  129 (221)
T 3ew7_A           66 VDAYGISP-D-------------EAEKHVTSLDHLISVLNGT--VSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYP  129 (221)
T ss_dssp             EECCCSST-T-------------TTTSHHHHHHHHHHHHCSC--CSSEEEEECCCC-------------------CCCSC
T ss_pred             EECCcCCc-c-------------ccchHHHHHHHHHHHHHhc--CCceEEEEecceEEEcCCCCccccccCCCCCHHHHH
Confidence            99999742 1             1345777777777766543  346999999987754332            345699


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      .+|++.+.+. .+.. ...+++++.|.||++.++...... ................+..++|+|++++.++....  ..
T Consensus       130 ~~k~~~e~~~-~~~~-~~~gi~~~ivrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~  204 (221)
T 3ew7_A          130 TARAQAKQLE-HLKS-HQAEFSWTYISPSAMFEPGERTGD-YQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN--HL  204 (221)
T ss_dssp             CHHHHHHHHH-HHHT-TTTTSCEEEEECSSCCCCC----------------------CCCHHHHHHHHHHHHHSCS--CT
T ss_pred             HHHHHHHHHH-HHHh-hccCccEEEEeCcceecCCCccCc-eEeccccceecCCCCceEeHHHHHHHHHHHHhCcc--cc
Confidence            9999999873 2322 123899999999999876211000 00000000000111347889999999999996643  56


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |+.+++.|-.+
T Consensus       205 g~~~~~~~~~~  215 (221)
T 3ew7_A          205 NEHFTVAGKLE  215 (221)
T ss_dssp             TSEEECCC---
T ss_pred             CCEEEECCCCc
Confidence            89999877543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.87  E-value=1.7e-21  Score=161.50  Aligned_cols=191  Identities=20%  Similarity=0.196  Sum_probs=142.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+ +|++|++++|+++. +        .+     +.+|++++++++++++.+     ++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~-~--------~~-----~~~Dl~~~~~~~~~~~~~-----~~d~v   61 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEI-Q--------GG-----YKLDLTDFPRLEDFIIKK-----RPDVI   61 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCC-T--------TC-----EECCTTSHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcC-C--------CC-----ceeccCCHHHHHHHHHhc-----CCCEE
Confidence            59999999999999999999 58999999998742 1        12     789999999999888865     69999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCC----------CChhhHHh
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPS----------AMAMYGVT  163 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~----------~~~~y~~s  163 (255)
                      |||||... .    +.+.+++++.+++|+.++..+++++.+.   ++++|++||..++.+.+          +...|+.+
T Consensus        62 i~~a~~~~-~----~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~s  133 (273)
T 2ggs_A           62 INAAAMTD-V----DKCEIEKEKAYKINAEAVRHIVRAGKVI---DSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLS  133 (273)
T ss_dssp             EECCCCCC-H----HHHHHCHHHHHHHHTHHHHHHHHHHHHT---TCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHH
T ss_pred             EECCcccC-h----hhhhhCHHHHHHHhHHHHHHHHHHHHHh---CCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHH
Confidence            99999753 1    1234678899999999999999999863   35999999998765432          35789999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC------CCCCCChHHHHHHHHHhcCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL------LNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |++.+.+++.    +.. .+|++.|. |  ++++..      .+........+      ...+..++|+|+++.++++..
T Consensus       134 K~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~~~~~~  200 (273)
T 2ggs_A          134 KLLGETFALQ----DDSLIIRTSGIF-R--NKGFPI------YVYKTLKEGKTVFAFKGYYSPISARKLASAILELLELR  200 (273)
T ss_dssp             HHHHHHHHCC----TTCEEEEECCCB-S--SSSHHH------HHHHHHHTTCCEEEESCEECCCBHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhC----CCeEEEeccccc-c--ccHHHH------HHHHHHHcCCCEEeecCCCCceEHHHHHHHHHHHHhcC
Confidence            9999999987    322 45655555 3  233221      11111111111      346889999999999999754


Q ss_pred             CCCccccEEeeCC
Q 025259          237 ASYITGETLVVAG  249 (255)
Q Consensus       237 ~~~~~G~~i~~dg  249 (255)
                      .   +| +++++|
T Consensus       201 ~---~g-~~~i~~  209 (273)
T 2ggs_A          201 K---TG-IIHVAG  209 (273)
T ss_dssp             C---CE-EEECCC
T ss_pred             c---CC-eEEECC
Confidence            2   45 888887

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.86  E-value=2.7e-21  Score=163.31  Aligned_cols=215  Identities=18%  Similarity=0.148  Sum_probs=157.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++++|||||+|+||++++++|+++  |++|++++|+.+..+     +..   ++.++.+|++|++++++++++.     +
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----~~~---~~~~~~~D~~d~~~~~~~~~~~-----~   68 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-----VVN---SGPFEVVNALDFNQIEHLVEVH-----K   68 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-----HHH---SSCEEECCTTCHHHHHHHHHHT-----T
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-----ccC---CCceEEecCCCHHHHHHHHhhc-----C
Confidence            478999999999999999999998  899999999865521     111   3457899999999988887753     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC------------CCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP------------PSAM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~------------~~~~  157 (255)
                      +|++||+||... .     ...+++++.+++|+.++..+++++.+.  ..+++|++||...+.+            ..+.
T Consensus        69 ~d~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  140 (312)
T 2yy7_A           69 ITDIYLMAALLS-A-----TAEKNPAFAWDLNMNSLFHVLNLAKAK--KIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS  140 (312)
T ss_dssp             CCEEEECCCCCH-H-----HHHHCHHHHHHHHHHHHHHHHHHHHTT--SCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred             CCEEEECCccCC-C-----chhhChHHHHHHHHHHHHHHHHHHHHc--CCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence            999999999643 1     123557888999999999999999874  2358999999876543            1246


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-----CHHHHHHhhccC--------CCCCCCChHH
Q 025259          158 AMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-----NDAVRKALEGKT--------LLNRLGTTGN  224 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-----~~~~~~~~~~~~--------~~~~~~~~~~  224 (255)
                      ..|+.+|.+.+.+++.++.++  +++++.+.|+.+.++...+...     ...+........        ....+...+|
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~--~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D  218 (312)
T 2yy7_A          141 TVYGISKQAGERWCEYYHNIY--GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDD  218 (312)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH--CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHH
T ss_pred             chhHHHHHHHHHHHHHHHHhc--CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHH
Confidence            789999999999999998877  7999999999888753211100     011122222111        1112456799


Q ss_pred             HHHHHHHhcCCCCCCc-cccEEeeCC
Q 025259          225 MAAAIAFLASDDASYI-TGETLVVAG  249 (255)
Q Consensus       225 va~~~~~l~s~~~~~~-~G~~i~~dg  249 (255)
                      +|+++..++....... .|+++++.|
T Consensus       219 va~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          219 AIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             HHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             HHHHHHHHHhCcccccccCceEEeCC
Confidence            9999999886543322 258888865

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.86  E-value=5.8e-21  Score=178.32  Aligned_cols=235  Identities=14%  Similarity=0.112  Sum_probs=159.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |++.+++++||||||+|+||++++++|+++|++|++++|+.+...+..+++.. .+.++.++.+|++++++++++++.. 
T Consensus         5 ~~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            5 LQSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             cccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            45678899999999999999999999999999999999876433222233322 1346778899999999988887753 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                          ++|+|||+||... ...    ..+...+.+++|+.++..+++++...  ..++||++||...+..           
T Consensus        84 ----~~D~Vih~A~~~~-~~~----~~~~~~~~~~~Nv~gt~~ll~a~~~~--~~~~iV~~SS~~vyg~~~~~~~~~~~~  152 (699)
T 1z45_A           84 ----KIDSVIHFAGLKA-VGE----STQIPLRYYHNNILGTVVLLELMQQY--NVSKFVFSSSATVYGDATRFPNMIPIP  152 (699)
T ss_dssp             ----CCCEEEECCSCCC-HHH----HHHSHHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEEGGGGCCGGGSTTCCSBC
T ss_pred             ----CCCEEEECCcccC-cCc----cccCHHHHHHHHHHHHHHHHHHHHHc--CCCEEEEECcHHHhCCCccccccCCcc
Confidence                7999999999753 111    12334678999999999999988764  3468999999865421           


Q ss_pred             ----CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc--------CC--HHHHHHhhc---cCCC
Q 025259          154 ----PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL--------GN--DAVRKALEG---KTLL  216 (255)
Q Consensus       154 ----~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~--------~~--~~~~~~~~~---~~~~  216 (255)
                          ..+...|+.+|++.+.+++.++.+...++++..+.|+.+..+.....+        ..  ..+......   ..+.
T Consensus       153 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (699)
T 1z45_A          153 EECPLGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYI  232 (699)
T ss_dssp             TTSCCCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCC
T ss_pred             ccCCCCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEE
Confidence                124568999999999999999988644899999999877654211110        00  111222111   1111


Q ss_pred             -------------CCCCChHHHHHHHHHhcCCC----CCCccccEEeeCCCcc
Q 025259          217 -------------NRLGTTGNMAAAIAFLASDD----ASYITGETLVVAGGMA  252 (255)
Q Consensus       217 -------------~~~~~~~~va~~~~~l~s~~----~~~~~G~~i~~dgG~~  252 (255)
                                   ..+...+|+|++++.++...    ...-.|+++++.+|..
T Consensus       233 ~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~  285 (699)
T 1z45_A          233 FGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKG  285 (699)
T ss_dssp             C------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCC
T ss_pred             eCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCC
Confidence                         12455799999988877421    1122467898887754

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.86  E-value=4.3e-21  Score=171.72  Aligned_cols=223  Identities=17%  Similarity=0.078  Sum_probs=158.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc---CCeEEEEeCChhHHHHHHHHHHH----------------cCCeEEEEEec
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE---GASVVISSRKQKNVDKAVEKLKA----------------LGIEVIGIICH   69 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~---G~~Vv~~~r~~~~~~~~~~~~~~----------------~~~~~~~~~~D   69 (255)
                      ..++++||||||+|+||++++++|++.   |++|++++|+.+..+.. +.+.+                ...++.++.+|
T Consensus        70 ~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           70 SPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDAR-RRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHH-HHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHH-HHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            467999999999999999999999999   89999999987654222 22211                23579999999


Q ss_pred             CC------CHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEE
Q 025259           70 VS------NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVV  143 (255)
Q Consensus        70 ~~------~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv  143 (255)
                      ++      +.+.++.+++       ++|+||||||....         +.+++.+++|+.++..+++++...-  ..++|
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~---------~~~~~~~~~Nv~gt~~ll~aa~~~~--~~~~V  210 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA---------FPYHELFGPNVAGTAELIRIALTTK--LKPFT  210 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB---------SSCCEEHHHHHHHHHHHHHHHTSSS--CCCEE
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC---------cCHHHHHHHHHHHHHHHHHHHHhCC--CCeEE
Confidence            98      5667666665       59999999997542         2234678999999999999988642  34899


Q ss_pred             EEcCcCccCCCCC----------------------ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhh--hh
Q 025259          144 FISSIAGYQPPSA----------------------MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA--QA  199 (255)
Q Consensus       144 ~vss~~~~~~~~~----------------------~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~--~~  199 (255)
                      ++||...+....+                      ...|+.+|.+.+.+++.++.+.  +++++.+.||+|.++-.  ..
T Consensus       211 ~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--gi~~~ivRpg~v~G~~~~~g~  288 (478)
T 4dqv_A          211 YVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC--ALPVAVFRCGMILADTSYAGQ  288 (478)
T ss_dssp             EEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECCSSSSSC
T ss_pred             EEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh--CCCeEEEECceeeCCCccCCc
Confidence            9999765432111                      1349999999999999999876  79999999999976522  11


Q ss_pred             hcCCHHH---HHHh-h-ccCC---------------CCCCCChHHHHHHHHHhcCCC--CCCccccEEeeCCCcc
Q 025259          200 LLGNDAV---RKAL-E-GKTL---------------LNRLGTTGNMAAAIAFLASDD--ASYITGETLVVAGGMA  252 (255)
Q Consensus       200 ~~~~~~~---~~~~-~-~~~~---------------~~~~~~~~~va~~~~~l~s~~--~~~~~G~~i~~dgG~~  252 (255)
                      ......+   .... . ...|               ...+...+|+|++++.++...  .....|+++++.++..
T Consensus       289 ~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~  363 (478)
T 4dqv_A          289 LNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHD  363 (478)
T ss_dssp             CCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCC
T ss_pred             CCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCC
Confidence            1111111   1111 1 1111               113467799999999887541  1234588999987754

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.86  E-value=1.5e-21  Score=164.69  Aligned_cols=215  Identities=13%  Similarity=0.150  Sum_probs=153.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||+|+||++++++|++.| +.|++++|+.+...  ...+..  ..   +.+|+++++.++.+++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~~~~~~--~~---~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--FVNLVD--LN---IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG--GHHHHT--SC---CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch--hhhcCc--ce---eccccccHHHHHHHHhccc--cCCCcE
Confidence            48999999999999999999999 89999999865421  111221  12   6789999888777665210  126999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~~y~  161 (255)
                      |||+||... .      +.+++++.+++|+.++..+++++.+.  .. ++|++||...+.+.           .+...|+
T Consensus        72 vi~~a~~~~-~------~~~~~~~~~~~n~~~~~~l~~a~~~~--~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~  141 (310)
T 1eq2_A           72 IFHEGACSS-T------TEWDGKYMMDNNYQYSKELLHYCLER--EI-PFLYASSAATYGGRTSDFIESREYEKPLNVYG  141 (310)
T ss_dssp             EEECCSCCC-T------TCCCHHHHHHHTHHHHHHHHHHHHHH--TC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHH
T ss_pred             EEECccccc-C------cccCHHHHHHHHHHHHHHHHHHHHHc--CC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCChhH
Confidence            999999754 1      22346778999999999999999875  33 89999998665322           2356899


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc--CC--HHHHHHhhccC---------C-CCCCCChHHHHH
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL--GN--DAVRKALEGKT---------L-LNRLGTTGNMAA  227 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~--~~--~~~~~~~~~~~---------~-~~~~~~~~~va~  227 (255)
                      .+|.+.+.+++.++.+.  +++++.+.||++.++......  ..  ..+........         . ...+...+|+|+
T Consensus       142 ~sK~~~e~~~~~~~~~~--g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~  219 (310)
T 1eq2_A          142 YSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD  219 (310)
T ss_dssp             HHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc--CCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence            99999999999988765  799999999999877532110  00  11212111111         1 234567899999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++.++....    |+++++.+|...
T Consensus       220 ~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          220 VNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             HHHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHHHhcCC----CCeEEEeCCCcc
Confidence            9999986543    789999888654

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.86  E-value=1.4e-21  Score=163.38  Aligned_cols=193  Identities=16%  Similarity=0.199  Sum_probs=146.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+++|++|++++|.                     .+|++|.+++.++++..     ++|++
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~---------------------~~D~~d~~~~~~~~~~~-----~~d~v   60 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK---------------------LLDITNISQVQQVVQEI-----RPHII   60 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT---------------------TSCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc---------------------ccCCCCHHHHHHHHHhc-----CCCEE
Confidence            79999999999999999999999999999992                     38999999999888865     79999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+||... ..    ...+++++.+++|+.++..+++++.+.   +.++|++||...+.+           ..+...|+.
T Consensus        61 i~~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  132 (287)
T 3sc6_A           61 IHCAAYTK-VD----QAEKERDLAYVINAIGARNVAVASQLV---GAKLVYISTDYVFQGDRPEGYDEFHNPAPINIYGA  132 (287)
T ss_dssp             EECCCCCC-HH----HHTTCHHHHHHHHTHHHHHHHHHHHHH---TCEEEEEEEGGGSCCCCSSCBCTTSCCCCCSHHHH
T ss_pred             EECCcccC-hH----HHhcCHHHHHHHHHHHHHHHHHHHHHc---CCeEEEEchhhhcCCCCCCCCCCCCCCCCCCHHHH
Confidence            99999753 11    112457788999999999999999875   237999999876532           234678999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC-------CCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~~~l~s~  235 (255)
                      +|.+.+.+++.++.      ++..+.|+.+.++.....  ...+........+       ...+..++|+|+++.+++..
T Consensus       133 sK~~~E~~~~~~~~------~~~ilR~~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  204 (287)
T 3sc6_A          133 SKYAGEQFVKELHN------KYFIVRTSWLYGKYGNNF--VKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHT  204 (287)
T ss_dssp             HHHHHHHHHHHHCS------SEEEEEECSEECSSSCCH--HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHhCC------CcEEEeeeeecCCCCCcH--HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhC
Confidence            99999999987643      457888998877642211  1122222222221       12456689999999999976


Q ss_pred             CCCCccccEEeeCCCcc
Q 025259          236 DASYITGETLVVAGGMA  252 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~  252 (255)
                      ..    ++++++.+|..
T Consensus       205 ~~----~~~~~i~~~~~  217 (287)
T 3sc6_A          205 SL----YGTYHVSNTGS  217 (287)
T ss_dssp             CC----CEEEECCCBSC
T ss_pred             CC----CCeEEEcCCCc
Confidence            54    66999988864

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.85  E-value=4.2e-21  Score=162.81  Aligned_cols=208  Identities=13%  Similarity=0.123  Sum_probs=153.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++++|||||+|+||++++++|+++|+.|++++|+.                    .+|+++++++.++++..     ++|
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~--------------------~~D~~d~~~~~~~~~~~-----~~d   57 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RID   57 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc--------------------cCCccCHHHHHHHHHhc-----CCC
Confidence            46899999999999999999999999999888763                    27999999998888764     699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC---------------CCC
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP---------------PSA  156 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~---------------~~~  156 (255)
                      +|||+|+... .   .....++.++.+++|+.++..+++++.+.-  ..++|++||...+..               ..+
T Consensus        58 ~vih~a~~~~-~---~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p  131 (321)
T 1e6u_A           58 QVYLAAAKVG-G---IVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEP  131 (321)
T ss_dssp             EEEECCCCCC-C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCG
T ss_pred             EEEEcCeecC-C---cchhhhCHHHHHHHHHHHHHHHHHHHHHhC--CCeEEEEccHHHcCCCCCCCcCccccccCCCCC
Confidence            9999999642 1   111234567889999999999999998742  358999999876532               111


Q ss_pred             -ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHHhhc-------cC-------CCC
Q 025259          157 -MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKALEG-------KT-------LLN  217 (255)
Q Consensus       157 -~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~-------~~-------~~~  217 (255)
                       ...|+.+|.+.+.+++.++.+.  +++++.+.|+++.++.......    ...+......       ..       ...
T Consensus       132 ~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~  209 (321)
T 1e6u_A          132 TNEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR  209 (321)
T ss_dssp             GGHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred             CCCccHHHHHHHHHHHHHHHHHh--CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEE
Confidence             2589999999999999998876  7999999999998875421100    0122222211       11       112


Q ss_pred             CCCChHHHHHHHHHhcCCCCC------CccccEEeeCCCcc
Q 025259          218 RLGTTGNMAAAIAFLASDDAS------YITGETLVVAGGMA  252 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~------~~~G~~i~~dgG~~  252 (255)
                      .+...+|+|++++.++.....      ...|+++++.+|..
T Consensus       210 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~  250 (321)
T 1e6u_A          210 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVD  250 (321)
T ss_dssp             CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCC
T ss_pred             EeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCC
Confidence            356789999999998865321      12478999987754

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=9.1e-21  Score=160.48  Aligned_cols=211  Identities=19%  Similarity=0.170  Sum_probs=151.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++|||||+|+||++++++|++.  |+.|++++|+.+..+           .+.++.+|++|++++.+++++.     ++|
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-----------~~~~~~~D~~d~~~~~~~~~~~-----~~d   64 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG-----------GIKFITLDVSNRDEIDRAVEKY-----SID   64 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT-----------TCCEEECCTTCHHHHHHHHHHT-----TCC
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc-----------CceEEEecCCCHHHHHHHHhhc-----CCc
Confidence            4899999999999999999998  899999998765421           3457889999999988887752     799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC------------CCChh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP------------SAMAM  159 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~------------~~~~~  159 (255)
                      +|||+|+... .     ...+++++.+++|+.++..+++++.+.  ..+++|++||...+.+.            .+...
T Consensus        65 ~vih~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~a~~~~--~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~  136 (317)
T 3ajr_A           65 AIFHLAGILS-A-----KGEKDPALAYKVNMNGTYNILEAAKQH--RVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM  136 (317)
T ss_dssp             EEEECCCCCH-H-----HHHHCHHHHHHHHHHHHHHHHHHHHHT--TCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred             EEEECCcccC-C-----ccccChHHHhhhhhHHHHHHHHHHHHc--CCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence            9999999643 1     123557889999999999999999874  33589999998776432            24678


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh-cC-C---HHHHHHhhccC--------CCCCCCChHHHH
Q 025259          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL-LG-N---DAVRKALEGKT--------LLNRLGTTGNMA  226 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~-~~-~---~~~~~~~~~~~--------~~~~~~~~~~va  226 (255)
                      |+.+|.+.+.+++.++.+.  +++++.+.|+.+..+..... .. .   ..+........        ....+...+|+|
T Consensus       137 Y~~sK~~~e~~~~~~~~~~--~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  214 (317)
T 3ajr_A          137 FGVTKIAAELLGQYYYEKF--GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDAL  214 (317)
T ss_dssp             HHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc--CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHH
Confidence            9999999999999998776  78999998665544221100 00 0   11122221111        011234679999


Q ss_pred             HHHHHhcCCCC-CCccccEEeeCCC
Q 025259          227 AAIAFLASDDA-SYITGETLVVAGG  250 (255)
Q Consensus       227 ~~~~~l~s~~~-~~~~G~~i~~dgG  250 (255)
                      ++++.++.... ...+|+++++.|+
T Consensus       215 ~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          215 KALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHhCCccccccCceEecCCc
Confidence            99988875543 2335789999764

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.85  E-value=7e-21  Score=171.58  Aligned_cols=217  Identities=13%  Similarity=0.032  Sum_probs=158.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH---HHHHHHHHHH---------cCCeEEEEEecCCCHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN---VDKAVEKLKA---------LGIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~---~~~~~~~~~~---------~~~~~~~~~~D~~~~~~~~~~   79 (255)
                      .++||||||+|+||++++++|.+.|++|+++.|+...   .++..+.++.         ...++.++.+|+++++.+.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            4799999999999999999999899999999998773   3333333322         2468999999999977766  


Q ss_pred             HHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc--cC-----
Q 025259           80 IDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG--YQ-----  152 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~--~~-----  152 (255)
                            ...++|+|||||+...        ....+++.+++|+.++..+++++.+   ...++|++||...  ..     
T Consensus       228 ------~~~~~D~Vih~Aa~~~--------~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~  290 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTD--------HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTE  290 (508)
T ss_dssp             ------CSSCCSEEEECCCC----------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCS
T ss_pred             ------CccCCCEEEECCceec--------CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCc
Confidence                  3458999999999753        1235677899999999999999987   3468999999877  10     


Q ss_pred             -----------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----C---HHHHHHhhccC
Q 025259          153 -----------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----N---DAVRKALEGKT  214 (255)
Q Consensus       153 -----------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~---~~~~~~~~~~~  214 (255)
                                 +..+...|+.+|.+.+.+++.++..   +++++.+.||.+.++.......    .   ...........
T Consensus       291 ~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~  367 (508)
T 4f6l_B          291 DVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVNN---GLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLD  367 (508)
T ss_dssp             CCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHHT---TCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCS
T ss_pred             CcccccccccccccCCCcHHHHHHHHHHHHHHHHHc---CCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcC
Confidence                       0124678999999999999987653   8999999999998775433211    0   11222222111


Q ss_pred             --CC------CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          215 --LL------NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       215 --~~------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                        +.      ..+...+|+|+++++++....   .|+++++.+|...
T Consensus       368 ~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          368 CIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             EEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             CCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence              11      125667999999999997654   7899999988654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.85  E-value=2.2e-20  Score=155.98  Aligned_cols=198  Identities=9%  Similarity=0.036  Sum_probs=146.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      |++|||||+|+||++++++|++.  |++|++++|+.+..+...    .  ..+.++.+|++|++++.++++       ++
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~----~--~~~~~~~~D~~d~~~l~~~~~-------~~   67 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA----D--QGVEVRHGDYNQPESLQKAFA-------GV   67 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh----h--cCCeEEEeccCCHHHHHHHHh-------cC
Confidence            46999999999999999999998  999999999876654332    2  246788999999998887765       68


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      |++||+|+..  .      . +      ++|+.++..+++++...  ..+++|++||..+..   ....|+.+|.+.+.+
T Consensus        68 d~vi~~a~~~--~------~-~------~~n~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~---~~~~y~~~K~~~E~~  127 (287)
T 2jl1_A           68 SKLLFISGPH--Y------D-N------TLLIVQHANVVKAARDA--GVKHIAYTGYAFAEE---SIIPLAHVHLATEYA  127 (287)
T ss_dssp             SEEEECCCCC--S------C-H------HHHHHHHHHHHHHHHHT--TCSEEEEEEETTGGG---CCSTHHHHHHHHHHH
T ss_pred             CEEEEcCCCC--c------C-c------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCC---CCCchHHHHHHHHHH
Confidence            9999999952  1      1 1      57899999999988764  235899999987652   234799999999998


Q ss_pred             HHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhh----ccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          171 TKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALE----GKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       171 ~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      ++.      .+++++.+.||++.++......  ......-.    .......+..++|+|+++..++....  .+|++++
T Consensus       128 ~~~------~~~~~~ilrp~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~  197 (287)
T 2jl1_A          128 IRT------TNIPYTFLRNALYTDFFVNEGL--RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEEG--HENKTYN  197 (287)
T ss_dssp             HHH------TTCCEEEEEECCBHHHHSSGGG--HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSS--CTTEEEE
T ss_pred             HHH------cCCCeEEEECCEeccccchhhH--HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCCC--CCCcEEE
Confidence            863      3799999999988766421111  11111100    01122357899999999999986542  4789999


Q ss_pred             eCCCccC
Q 025259          247 VAGGMAS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +.||...
T Consensus       198 i~~~~~~  204 (287)
T 2jl1_A          198 LVSNQPW  204 (287)
T ss_dssp             ECCSSCB
T ss_pred             ecCCCcC
Confidence            9998654

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.85  E-value=3.6e-22  Score=169.16  Aligned_cols=216  Identities=14%  Similarity=-0.017  Sum_probs=144.7

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH--cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA--LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +.++++++||||||+|+||++++++|++.|++|++++|+.+........+..  ...++.++.+|++             
T Consensus         2 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-------------   68 (321)
T 3vps_A            2 QRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS-------------   68 (321)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT-------------
T ss_pred             CcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc-------------
Confidence            4456789999999999999999999999999999999986510000000000  0112333444444             


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                          ++|+|||+|+... .....    ++....++ |+.++..+++++...-  ..++|++||...+..           
T Consensus        69 ----~~d~vi~~a~~~~-~~~~~----~~~~~~~~-n~~~~~~ll~a~~~~~--v~~~v~~SS~~v~~~~~~~~~~E~~~  136 (321)
T 3vps_A           69 ----DVRLVYHLASHKS-VPRSF----KQPLDYLD-NVDSGRHLLALCTSVG--VPKVVVGSTCEVYGQADTLPTPEDSP  136 (321)
T ss_dssp             ----TEEEEEECCCCCC-HHHHT----TSTTTTHH-HHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ----cCCEEEECCccCC-hHHHH----hCHHHHHH-HHHHHHHHHHHHHHcC--CCeEEEecCHHHhCCCCCCCCCCCCC
Confidence                6999999999754 11111    11223456 9999999999998753  358999999876532           


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCc-EEEEEeCCcccChhhhhhcCCHHHHHHhhccC---------CCCCCCChH
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKT---------LLNRLGTTG  223 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~  223 (255)
                      ..+...|+.+|.+.+.+++.++.+.  ++ +++.+.|+.+.++..........+........         ....+..++
T Consensus       137 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~  214 (321)
T 3vps_A          137 LSPRSPYAASKVGLEMVAGAHQRAS--VAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYIT  214 (321)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHSS--SSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHH
T ss_pred             CCCCChhHHHHHHHHHHHHHHHHHc--CCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHH
Confidence            2345789999999999999999875  78 99999999998765332100112222222111         112356889


Q ss_pred             HHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          224 NMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       224 ~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+++.+++.....   | ++++.+|...
T Consensus       215 Dva~~~~~~~~~~~~---g-~~~i~~~~~~  240 (321)
T 3vps_A          215 DVVDKLVALANRPLP---S-VVNFGSGQSL  240 (321)
T ss_dssp             HHHHHHHHGGGSCCC---S-EEEESCSCCE
T ss_pred             HHHHHHHHHHhcCCC---C-eEEecCCCcc
Confidence            999999999977543   7 9999988653

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.84  E-value=2.2e-21  Score=163.02  Aligned_cols=200  Identities=16%  Similarity=0.094  Sum_probs=147.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++|||||+|+||++++++|+ +|++|++++|+.+                 ++.+|++|++++.++++..     ++|++
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-----------------~~~~D~~d~~~~~~~~~~~-----~~d~v   58 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-----------------EFCGDFSNPKGVAETVRKL-----RPDVI   58 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-----------------SSCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-----------------cccccCCCHHHHHHHHHhc-----CCCEE
Confidence            69999999999999999999 8999999999762                 3579999999998888754     69999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC-----------CCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP-----------SAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~-----------~~~~~y~~  162 (255)
                      ||+||... ..    .+.+++++.+++|+.++..+++++.+.   +.++|++||...+.+.           .+...|+.
T Consensus        59 ih~a~~~~-~~----~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~  130 (299)
T 1n2s_A           59 VNAAAHTA-VD----KAESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (299)
T ss_dssp             EECCCCCC-HH----HHTTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             EECcccCC-Hh----hhhcCHHHHHHHHHHHHHHHHHHHHHc---CCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHH
Confidence            99999643 11    112346778999999999999999764   2389999998765332           23568999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC-------CCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-------LNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~va~~~~~l~s~  235 (255)
                      +|.+.+.+++.++.      +++.+.|+++.++.....  ...+........+       ...+..++|+|+++.+++..
T Consensus       131 sK~~~E~~~~~~~~------~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~  202 (299)
T 1n2s_A          131 TKLAGEKALQDNCP------KHLIFRTSWVYAGKGNNF--AKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRV  202 (299)
T ss_dssp             HHHHHHHHHHHHCS------SEEEEEECSEECSSSCCH--HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCC------CeEEEeeeeecCCCcCcH--HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHH
Confidence            99999999987642      789999999987643211  1122222222211       12355689999999999865


Q ss_pred             CCCCc-cccEEeeCCCcc
Q 025259          236 DASYI-TGETLVVAGGMA  252 (255)
Q Consensus       236 ~~~~~-~G~~i~~dgG~~  252 (255)
                      ..... .|+++++.+|..
T Consensus       203 ~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          203 ALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHCGGGCEEEECCCBSC
T ss_pred             hccccccCceEEEeCCCC
Confidence            32123 588999998864

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.83  E-value=4.6e-20  Score=155.53  Aligned_cols=213  Identities=13%  Similarity=0.047  Sum_probs=149.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +++++||||||+|+||++++++|++.|+      +...           ....+.++.+|++|++++.++++..     +
T Consensus         4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~-----------~~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE-----------DWVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC-----------EEEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc-----------cccccCceecccCCHHHHHHHHhhc-----C
Confidence            5678999999999999999999999998      1110           0112333479999999998888753     6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC----------------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP----------------  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~----------------  153 (255)
                      +|+|||+|+... ..   ..+.++..+.+++|+.++..+++++...-  ..++|++||...+..                
T Consensus        62 ~d~Vih~A~~~~-~~---~~~~~~~~~~~~~nv~gt~~ll~a~~~~~--~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~  135 (319)
T 4b8w_A           62 PTHVIHLAAMVG-GL---FRNIKYNLDFWRKNVHMNDNVLHSAFEVG--ARKVVSCLSTCIFPDKTTYPIDETMIHNGPP  135 (319)
T ss_dssp             CSEEEECCCCCC-CH---HHHTTCHHHHHHHHHHHHHHHHHHHHHTT--CSEEEEECCGGGSCSSCCSSBCGGGGGBSCC
T ss_pred             CCEEEECceecc-cc---cccccCHHHHHHHHHHHHHHHHHHHHHcC--CCeEEEEcchhhcCCCCCCCccccccccCCC
Confidence            999999999743 11   11123456779999999999999998753  348999999866422                


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC----CHHHHHH----hhccCCC---------
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG----NDAVRKA----LEGKTLL---------  216 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~----~~~~~~~---------  216 (255)
                      .+....|+.+|.+.+.+++.++.+.  ++++..+.|+.+.++.......    .+.+...    .....+.         
T Consensus       136 ~p~~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  213 (319)
T 4b8w_A          136 HNSNFGYSYAKRMIDVQNRAYFQQY--GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR  213 (319)
T ss_dssp             CSSSHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred             CCCcchHHHHHHHHHHHHHHHHHhh--CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence            1122369999999999999999887  7899999999998775321110    0112222    1211111         


Q ss_pred             CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          217 NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       217 ~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ..+...+|+|++++.++.... ...|+++++.+|...
T Consensus       214 ~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~~~  249 (319)
T 4b8w_A          214 RQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEEDEV  249 (319)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGGCE
T ss_pred             EEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCCce
Confidence            234678999999999886532 245788988877543

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.82  E-value=7.1e-20  Score=152.70  Aligned_cols=194  Identities=13%  Similarity=0.070  Sum_probs=139.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++|||||+|+||++++++|+++  |++|++++|+++..+...    .  ..+.++.+|++|++++.++++       ++|
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~~D~~d~~~~~~~~~-------~~d   67 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA----A--QGITVRQADYGDEAALTSALQ-------GVE   67 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH----H--TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh----c--CCCeEEEcCCCCHHHHHHHHh-------CCC
Confidence            4899999999999999999998  999999999877654322    2  246778999999998887765       689


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT  171 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~  171 (255)
                      ++||+|+...                 ..|+.++..+++++...  ..+++|++||..++.   ....|+.+|.+.+.++
T Consensus        68 ~vi~~a~~~~-----------------~~~~~~~~~l~~a~~~~--~~~~~v~~Ss~~~~~---~~~~y~~sK~~~e~~~  125 (286)
T 2zcu_A           68 KLLLISSSEV-----------------GQRAPQHRNVINAAKAA--GVKFIAYTSLLHADT---SPLGLADEHIETEKML  125 (286)
T ss_dssp             EEEECC-------------------------CHHHHHHHHHHHH--TCCEEEEEEETTTTT---CCSTTHHHHHHHHHHH
T ss_pred             EEEEeCCCCc-----------------hHHHHHHHHHHHHHHHc--CCCEEEEECCCCCCC---CcchhHHHHHHHHHHH
Confidence            9999999521                 13677888888877764  235899999987752   2357999999999988


Q ss_pred             HHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHh-h---ccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          172 KALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKAL-E---GKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       172 ~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +.      .+++++.+.||++.+++....   ......- .   .......+..++|+|+++.+++....  .+|+++++
T Consensus       126 ~~------~~~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g~~~~i  194 (286)
T 2zcu_A          126 AD------SGIVYTLLRNGWYSENYLASA---PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEGKVYEL  194 (286)
T ss_dssp             HH------HCSEEEEEEECCBHHHHHTTH---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTTCEEEE
T ss_pred             HH------cCCCeEEEeChHHhhhhHHHh---HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCCceEEE
Confidence            63      279999999998877643111   1111100 0   01122457899999999999987543  47999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      .||...
T Consensus       195 ~~~~~~  200 (286)
T 2zcu_A          195 AGDSAW  200 (286)
T ss_dssp             CCSSCB
T ss_pred             eCCCcC
Confidence            998543

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.82  E-value=5.8e-21  Score=159.61  Aligned_cols=199  Identities=16%  Similarity=0.113  Sum_probs=147.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++++|||| +|+||++++++|++.|++|++++|+.+.+          ..++.++.+|++|++++.++++      +++|
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~~~~~~~Dl~d~~~~~~~~~------~~~d   65 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM----------PAGVQTLIADVTRPDTLASIVH------LRPE   65 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC----------CTTCCEEECCTTCGGGCTTGGG------GCCS
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc----------ccCCceEEccCCChHHHHHhhc------CCCC
Confidence            46899999 59999999999999999999999987652          2457788999999998877665      3699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y  160 (255)
                      +|||+|+..          ..+.++.+++|+.++..+++++...  ..+++|++||...+..           ..+...|
T Consensus        66 ~vih~a~~~----------~~~~~~~~~~n~~~~~~ll~a~~~~--~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y  133 (286)
T 3gpi_A           66 ILVYCVAAS----------EYSDEHYRLSYVEGLRNTLSALEGA--PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFS  133 (286)
T ss_dssp             EEEECHHHH----------HHC-----CCSHHHHHHHHHHTTTS--CCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHH
T ss_pred             EEEEeCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhC--CCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChh
Confidence            999999962          2345677899999999999998753  3358999999876432           2346789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhc------cCCCCCCCChHHHHHHHHHhcC
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEG------KTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      +.+|.+.+.+ +..       ++++.+.|+.+.++...      .+......      ......+...+|+|+++.+++.
T Consensus       134 ~~sK~~~E~~-~~~-------~~~~ilR~~~v~G~~~~------~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~  199 (286)
T 3gpi_A          134 GKRMLEAEAL-LAA-------YSSTILRFSGIYGPGRL------RMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQ  199 (286)
T ss_dssp             HHHHHHHHHH-GGG-------SSEEEEEECEEEBTTBC------HHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHH-Hhc-------CCeEEEecccccCCCch------hHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHh
Confidence            9999999988 543       78899999988876432      11122211      1122346678999999999987


Q ss_pred             CCCCCccccEEeeCCCccC
Q 025259          235 DDASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~  253 (255)
                      .......|+++++.+|...
T Consensus       200 ~~~~~~~~~~~~~~~~~~~  218 (286)
T 3gpi_A          200 QRSHAVPERLYIVTDNQPL  218 (286)
T ss_dssp             HHTTSCCCSEEEECCSCCE
T ss_pred             hhccCCCCceEEEeCCCCC
Confidence            6433456899999988643

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.78  E-value=7.6e-19  Score=147.64  Aligned_cols=204  Identities=13%  Similarity=0.000  Sum_probs=140.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||||+|+||++++++|++.| ++|++++|+++..+.  +.+...  .+.++.+|++|++++.++++       ++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~~--~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRLQ--GAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHHT--TCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHHC--CCEEEEecCCCHHHHHHHHh-------cC
Confidence            5789999999999999999999998 999999998765432  233333  36778999999999887776       69


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC--CCCCChhhHHhHHHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--PPSAMAMYGVTKTALL  168 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~--~~~~~~~y~~sKaa~~  168 (255)
                      |++||+++... . .           ....|+.++..+++++...  ..++||++|+.....  .......|+.+|.+++
T Consensus        74 d~vi~~a~~~~-~-~-----------~~~~~~~~~~~~~~aa~~~--gv~~iv~~S~~~~~~~~~~~~~~~y~~sK~~~e  138 (299)
T 2wm3_A           74 YATFIVTNYWE-S-C-----------SQEQEVKQGKLLADLARRL--GLHYVVYSGLENIKKLTAGRLAAAHFDGKGEVE  138 (299)
T ss_dssp             SEEEECCCHHH-H-T-----------CHHHHHHHHHHHHHHHHHH--TCSEEEECCCCCHHHHTTTSCCCHHHHHHHHHH
T ss_pred             CEEEEeCCCCc-c-c-----------cchHHHHHHHHHHHHHHHc--CCCEEEEEcCccccccCCCcccCchhhHHHHHH
Confidence            99999998532 0 0           1345566666777766543  345899966544322  1122467999999999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHh--hccCCC----CCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKAL--EGKTLL----NRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      .+++.    .  +++++.+.||++.+++........ .....  .-..+.    ..+..++|+|+++..++.... ...|
T Consensus       139 ~~~~~----~--gi~~~ilrp~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~g  210 (299)
T 2wm3_A          139 EYFRD----I--GVPMTSVRLPCYFENLLSHFLPQK-APDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-KYVG  210 (299)
T ss_dssp             HHHHH----H--TCCEEEEECCEEGGGGGTTTCCEE-CTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-HHTT
T ss_pred             HHHHH----C--CCCEEEEeecHHhhhchhhcCCcc-cCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-hhCC
Confidence            98864    2  799999999999887653221100 00000  000111    235688999999999986532 2368


Q ss_pred             cEEeeCC
Q 025259          243 ETLVVAG  249 (255)
Q Consensus       243 ~~i~~dg  249 (255)
                      +++++.|
T Consensus       211 ~~~~~~g  217 (299)
T 2wm3_A          211 QNIGLST  217 (299)
T ss_dssp             CEEECCS
T ss_pred             eEEEeee
Confidence            8999876

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.77  E-value=1.3e-18  Score=149.90  Aligned_cols=206  Identities=14%  Similarity=0.052  Sum_probs=140.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEec-CCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH-VSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++++++||||+|+||++++++|++.|++|++++|+.+...  .+.+.. ...+.++.+| ++|++++.++++       .
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~--~~~l~~-~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLI--AEELQA-IPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHH--HHHHHT-STTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhh--HHHHhh-cCCcEEEECCccCCHHHHHHHHh-------c
Confidence            4678999999999999999999999999999999876542  122322 2357888999 999999887765       6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC-ccCCCCCChhhHHhHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA-GYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~-~~~~~~~~~~y~~sKaa~~  168 (255)
                      +|++|||++... .               ..|..+ ..+++++...- +.+++|++||.. +..+.++...|+.+|++.+
T Consensus        74 ~d~Vi~~a~~~~-~---------------~~~~~~-~~l~~aa~~~g-~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E  135 (352)
T 1xgk_A           74 AHLAFINTTSQA-G---------------DEIAIG-KDLADAAKRAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVE  135 (352)
T ss_dssp             CSEEEECCCSTT-S---------------CHHHHH-HHHHHHHHHHS-CCSEEEEEECCCGGGTSSCCCCTTTHHHHHHH
T ss_pred             CCEEEEcCCCCC-c---------------HHHHHH-HHHHHHHHHcC-CccEEEEeCCccccccCCCCCccHHHHHHHHH
Confidence            899999997531 0               124444 56666665431 135999999986 3444445577999999999


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc----CC-----CCCCCCh-HHHHHHHHHhcCCCCC
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK----TL-----LNRLGTT-GNMAAAIAFLASDDAS  238 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~-~~va~~~~~l~s~~~~  238 (255)
                      .+++.+      +++++.|.||++.+.........-.........    .+     ...+..+ +|+|+++..++.....
T Consensus       136 ~~~~~~------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~  209 (352)
T 1xgk_A          136 NYVRQL------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQ  209 (352)
T ss_dssp             HHHHTS------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHH
T ss_pred             HHHHHc------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCch
Confidence            998752      789999999977544321100000000000000    01     1125677 8999999999865433


Q ss_pred             CccccEEeeCCC
Q 025259          239 YITGETLVVAGG  250 (255)
Q Consensus       239 ~~~G~~i~~dgG  250 (255)
                      ...|+++++.++
T Consensus       210 ~~~g~~~~l~~~  221 (352)
T 1xgk_A          210 KWNGHRIALTFE  221 (352)
T ss_dssp             HHTTCEEEECSE
T ss_pred             hhCCeEEEEecC
Confidence            456899999864

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.76  E-value=2.6e-18  Score=148.58  Aligned_cols=191  Identities=16%  Similarity=0.094  Sum_probs=143.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|+||++++++|++.|+ .|+.++|+                         +++++++++++       ++|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~-------------------------~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ-------------------------TKEEELESALL-------KADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT-------------------------CCHHHHHHHHH-------HCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC-------------------------CCHHHHHHHhc-------cCCE
Confidence            699999999999999999999998 78777764                         67888888776       4999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      +||+||... .        ++..+.+++|+.++..+++++...- ...++|++||...+.    ...|+.+|.+.+.+++
T Consensus        50 Vih~a~~~~-~--------~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~  115 (369)
T 3st7_A           50 IVHLAGVNR-P--------EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ----DNPYGESKLQGEQLLR  115 (369)
T ss_dssp             EEECCCSBC-T--------TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHH
T ss_pred             EEECCcCCC-C--------CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC----CCCchHHHHHHHHHHH
Confidence            999999754 1        1234457889999999999987642 123899999987665    5689999999999999


Q ss_pred             HHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCCC--------CCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          173 ALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTLL--------NRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       173 ~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~~--------~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      .++.+.  ++++..+.|+.+.++.....+..  ..+........+.        ..+..++|+|+++..++..... ..|
T Consensus       116 ~~~~~~--g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~-~~~  192 (369)
T 3st7_A          116 EYAEEY--GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPT-IEN  192 (369)
T ss_dssp             HHHHHH--CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCC-EET
T ss_pred             HHHHHh--CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcc-cCC
Confidence            999887  78999999999987754332111  1222222222222        1245579999999999876432 248


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      +++++.+|...
T Consensus       193 ~~~~i~~~~~~  203 (369)
T 3st7_A          193 GVPTVPNVFKV  203 (369)
T ss_dssp             TEECCSCCEEE
T ss_pred             ceEEeCCCCce
Confidence            89999887543

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.76  E-value=2.6e-17  Score=137.51  Aligned_cols=195  Identities=11%  Similarity=0.070  Sum_probs=133.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|+||++++++|++. |++|++++|+.+..+..      ....+.++.+|++|++++.++++       ++|+
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~------~~~~v~~~~~D~~d~~~l~~~~~-------~~d~   68 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD------WRGKVSVRQLDYFNQESMVEAFK-------GMDT   68 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG------GBTTBEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh------hhCCCEEEEcCCCCHHHHHHHHh-------CCCE
Confidence            5999999999999999999998 99999999998764332      12467889999999998887765       7999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK  172 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~  172 (255)
                      +||++|... .              ...|+.++..+++++...  ..++||++||.......+    |..++...  +++
T Consensus        69 vi~~a~~~~-~--------------~~~~~~~~~~l~~aa~~~--gv~~iv~~Ss~~~~~~~~----~~~~~~~~--~~e  125 (289)
T 3e48_A           69 VVFIPSIIH-P--------------SFKRIPEVENLVYAAKQS--GVAHIIFIGYYADQHNNP----FHMSPYFG--YAS  125 (289)
T ss_dssp             EEECCCCCC-S--------------HHHHHHHHHHHHHHHHHT--TCCEEEEEEESCCSTTCC----STTHHHHH--HHH
T ss_pred             EEEeCCCCc-c--------------chhhHHHHHHHHHHHHHc--CCCEEEEEcccCCCCCCC----CccchhHH--HHH
Confidence            999999643 1              123667777777777654  235899999965433222    22222211  222


Q ss_pred             HHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCC----CCChHHHHHHHHHhcCCCCCCccccEEeeC
Q 025259          173 ALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNR----LGTTGNMAAAIAFLASDDASYITGETLVVA  248 (255)
Q Consensus       173 ~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~va~~~~~l~s~~~~~~~G~~i~~d  248 (255)
                      ....+.  +++++.+.||++.+++....   ...........+.+.    +..++|+|+++.+++......  |+++++.
T Consensus       126 ~~~~~~--g~~~~ilrp~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g~~~~~~  198 (289)
T 3e48_A          126 RLLSTS--GIDYTYVRMAMYMDPLKPYL---PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--GKRYLLS  198 (289)
T ss_dssp             HHHHHH--CCEEEEEEECEESTTHHHHH---HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--TCEEEEC
T ss_pred             HHHHHc--CCCEEEEeccccccccHHHH---HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--CceEEeC
Confidence            222222  89999999999998764321   111111111222222    678999999999999775433  8999998


Q ss_pred             CCcc
Q 025259          249 GGMA  252 (255)
Q Consensus       249 gG~~  252 (255)
                       |..
T Consensus       199 -~~~  201 (289)
T 3e48_A          199 -GYS  201 (289)
T ss_dssp             -CEE
T ss_pred             -CCc
Confidence             654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.75  E-value=1.4e-17  Score=143.37  Aligned_cols=213  Identities=17%  Similarity=0.167  Sum_probs=144.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC-----CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG-----ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++++|||||+|+||++++++|+++|     ++|++++|+.+...       ....++.++.+|++|++++.++++..   
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~~~~~~~~~~~Dl~d~~~~~~~~~~~---   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------HEDNPINYVQCDISDPDDSQAKLSPL---   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------CCSSCCEEEECCTTSHHHHHHHHTTC---
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------cccCceEEEEeecCCHHHHHHHHhcC---
Confidence            4689999999999999999999999     99999999875432       12346788999999999888776532   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEE-------EEcCcCccCCC-----
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVV-------FISSIAGYQPP-----  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv-------~vss~~~~~~~-----  154 (255)
                       .++|++||+||...          ++.++.+++|+.++..+++++.+......++|       ++||...+...     
T Consensus        71 -~~~d~vih~a~~~~----------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~  139 (364)
T 2v6g_A           71 -TDVTHVFYVTWANR----------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDP  139 (364)
T ss_dssp             -TTCCEEEECCCCCC----------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCS
T ss_pred             -CCCCEEEECCCCCc----------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCC
Confidence             24999999999642          13567899999999999999998643334676       68877543211     


Q ss_pred             ---------CCChhhHHhHHHHHHHHHHHHHHhCCC-cEEEEEeCCcccChhhhhhcCC--HH-HHHHh---hccC-C-C
Q 025259          155 ---------SAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGN--DA-VRKAL---EGKT-L-L  216 (255)
Q Consensus       155 ---------~~~~~y~~sKaa~~~l~~~la~e~~~~-i~v~~v~pg~v~t~~~~~~~~~--~~-~~~~~---~~~~-~-~  216 (255)
                               +....|.    +.+.+++.++.+.  + +++..+.|+.+..+........  .. .....   .... . .
T Consensus       140 ~~~E~~~~~~~~~~y~----~~E~~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  213 (364)
T 2v6g_A          140 PYTEDLPRLKYMNFYY----DLEDIMLEEVEKK--EGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFT  213 (364)
T ss_dssp             SBCTTSCCCSSCCHHH----HHHHHHHHHHTTS--TTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCC
T ss_pred             CCCccccCCccchhhH----HHHHHHHHHhhcC--CCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecC
Confidence                     1133462    3455555554332  5 9999999999988654321110  11 12222   1211 1 1


Q ss_pred             ---------CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          217 ---------NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       217 ---------~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                               ....+.+|+|++++.++...  ...|+++++.+|...
T Consensus       214 g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~~  257 (364)
T 2v6g_A          214 GCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDVF  257 (364)
T ss_dssp             SCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCCB
T ss_pred             CCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCcC
Confidence                     12333488999999888543  246899999988643

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.75  E-value=2.1e-17  Score=139.05  Aligned_cols=196  Identities=12%  Similarity=0.086  Sum_probs=131.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-------hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-------KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +++++||||+|+||++++++|++.|++|++++|+.       +..+.. +++...  .+.++.+|++|++++.++++   
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~--~v~~v~~D~~d~~~l~~~~~---   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSL--GVILLEGDINDHETLVKAIK---   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHT--TCEEEECCTTCHHHHHHHHT---
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhC--CCEEEEeCCCCHHHHHHHHh---
Confidence            46799999999999999999999999999999986       433332 333333  36778999999998887776   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------CCCCCh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------PPSAMA  158 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------~~~~~~  158 (255)
                          ++|+|||+++...                    +.+...+++++...- .-.++|.  |..+..      ..+...
T Consensus        76 ----~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~--S~~g~~~~~~~~~~p~~~  128 (307)
T 2gas_A           76 ----QVDIVICAAGRLL--------------------IEDQVKIIKAIKEAG-NVKKFFP--SEFGLDVDRHDAVEPVRQ  128 (307)
T ss_dssp             ----TCSEEEECSSSSC--------------------GGGHHHHHHHHHHHC-CCSEEEC--SCCSSCTTSCCCCTTHHH
T ss_pred             ----CCCEEEECCcccc--------------------cccHHHHHHHHHhcC-CceEEee--cccccCcccccCCCcchh
Confidence                6999999999632                    345556666665431 1246763  443321      122245


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH------HHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          159 MYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND------AVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                      .| .+|.+++.+.+.    .  +++++.+.||++.+.+........      ..............+..++|+|+++..+
T Consensus       129 ~y-~sK~~~e~~~~~----~--~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~  201 (307)
T 2gas_A          129 VF-EEKASIRRVIEA----E--GVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRA  201 (307)
T ss_dssp             HH-HHHHHHHHHHHH----H--TCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH----c--CCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHH
Confidence            78 999999888752    2  789999999998886543221100      0000000011123467899999999999


Q ss_pred             cCCCCCCccccEEeeCC
Q 025259          233 ASDDASYITGETLVVAG  249 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dg  249 (255)
                      +....  ..|+.+.+.|
T Consensus       202 l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          202 ANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HTCGG--GTTEEEECCC
T ss_pred             HcCcc--ccCceEEEeC
Confidence            97642  3477777765

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.75  E-value=1.9e-17  Score=138.10  Aligned_cols=197  Identities=10%  Similarity=0.016  Sum_probs=135.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++|||||+ |.||++++++|+++|++|++++|+.+..+....      ..+.++.+|++|.+            +.++|+
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------------~~~~d~   66 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------------LDGVTH   66 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------------CTTCCE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------------cCCCCE
Confidence            68999998 999999999999999999999999877654332      35888999999822            457999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYG  161 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~  161 (255)
                      |||+|+... ..     .+  .          ...+.+++...-....++|++||...+..           ..+...|+
T Consensus        67 vi~~a~~~~-~~-----~~--~----------~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~  128 (286)
T 3ius_A           67 LLISTAPDS-GG-----DP--V----------LAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG  128 (286)
T ss_dssp             EEECCCCBT-TB-----CH--H----------HHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred             EEECCCccc-cc-----cH--H----------HHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence            999999653 11     01  0          12344444442123358999999865432           23345799


Q ss_pred             HhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHH-HHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDA-VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      .+|.+.+.+++.+     .++++..+.|+++.++.......-.. .............+...+|+|+++..++....   
T Consensus       129 ~sK~~~E~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~---  200 (286)
T 3ius_A          129 RWRVMAEQQWQAV-----PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPD---  200 (286)
T ss_dssp             HHHHHHHHHHHHS-----TTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCC---
T ss_pred             HHHHHHHHHHHhh-----cCCCEEEEeccceECCCchHHHHHhcCCccccCCCCcccceEEHHHHHHHHHHHHhCCC---
Confidence            9999999999877     47999999999998764321100000 00000000112345667999999999997654   


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      .|+++++.+|...+
T Consensus       201 ~g~~~~i~~~~~~s  214 (286)
T 3ius_A          201 PGAVYNVCDDEPVP  214 (286)
T ss_dssp             TTCEEEECCSCCBC
T ss_pred             CCCEEEEeCCCCcc
Confidence            68999999887543

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.74  E-value=1.2e-17  Score=143.15  Aligned_cols=200  Identities=10%  Similarity=0.017  Sum_probs=137.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh----hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ----KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++||||||+|+||++++++|++.|+.|++++|+.    +..+ ..+.+..  ..+.++.+|++|++++.+++++.    
T Consensus        10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~-~~~~l~~--~~v~~~~~Dl~d~~~l~~~~~~~----   82 (346)
T 3i6i_A           10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAK-IFKALED--KGAIIVYGLINEQEAMEKILKEH----   82 (346)
T ss_dssp             -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHHHHHH--TTCEEEECCTTCHHHHHHHHHHT----
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHH-HHHHHHh--CCcEEEEeecCCHHHHHHHHhhC----
Confidence            57899999999999999999999999999999986    2222 2223333  35778899999999998888753    


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc----CCCCCChhhHHh
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY----QPPSAMAMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~----~~~~~~~~y~~s  163 (255)
                       ++|+|||+++.                    .|+.++..+++++...- .-.++|+ |+....    .+.++...|+.+
T Consensus        83 -~~d~Vi~~a~~--------------------~n~~~~~~l~~aa~~~g-~v~~~v~-S~~g~~~~e~~~~~p~~~y~~s  139 (346)
T 3i6i_A           83 -EIDIVVSTVGG--------------------ESILDQIALVKAMKAVG-TIKRFLP-SEFGHDVNRADPVEPGLNMYRE  139 (346)
T ss_dssp             -TCCEEEECCCG--------------------GGGGGHHHHHHHHHHHC-CCSEEEC-SCCSSCTTTCCCCTTHHHHHHH
T ss_pred             -CCCEEEECCch--------------------hhHHHHHHHHHHHHHcC-CceEEee-cccCCCCCccCcCCCcchHHHH
Confidence             69999999996                    18888889998887653 1236664 432221    123456789999


Q ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHH------HHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          164 KTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAV------RKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      |.+.+.+.+.      .++++..+.||++.+.+..........      ............+..++|+|+++..++....
T Consensus       140 K~~~e~~l~~------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~  213 (346)
T 3i6i_A          140 KRRVRQLVEE------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR  213 (346)
T ss_dssp             HHHHHHHHHH------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG
T ss_pred             HHHHHHHHHH------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc
Confidence            9999888764      378999999998877543221110000      0000001112347788999999999997642


Q ss_pred             CCccccEEeeCC
Q 025259          238 SYITGETLVVAG  249 (255)
Q Consensus       238 ~~~~G~~i~~dg  249 (255)
                        ..|+.+.+.|
T Consensus       214 --~~~~~~~i~g  223 (346)
T 3i6i_A          214 --TLNKSVHFRP  223 (346)
T ss_dssp             --GTTEEEECCC
T ss_pred             --ccCeEEEEeC
Confidence              3366777764

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.70  E-value=3.7e-17  Score=138.47  Aligned_cols=197  Identities=11%  Similarity=0.073  Sum_probs=127.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .++++||||+|+||++++++|++.|++|++++|+.+......+++...  .+.++.+|++|++++.++++       ++|
T Consensus        11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~a~~-------~~d   81 (318)
T 2r6j_A           11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL--GAIIVKGELDEHEKLVELMK-------KVD   81 (318)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcC--CCEEEEecCCCHHHHHHHHc-------CCC
Confidence            367999999999999999999999999999999875222222333333  36778999999999888776       699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC---C---CCChhhHHhHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP---P---SAMAMYGVTKT  165 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~---~---~~~~~y~~sKa  165 (255)
                      +|||+++...                    +.+...+++++...- ...++|+ | ..+...   .   +....| .+|.
T Consensus        82 ~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S-~~g~~~~~~~~~~p~~~~y-~sK~  137 (318)
T 2r6j_A           82 VVISALAFPQ--------------------ILDQFKILEAIKVAG-NIKRFLP-S-DFGVEEDRINALPPFEALI-ERKR  137 (318)
T ss_dssp             EEEECCCGGG--------------------STTHHHHHHHHHHHC-CCCEEEC-S-CCSSCTTTCCCCHHHHHHH-HHHH
T ss_pred             EEEECCchhh--------------------hHHHHHHHHHHHhcC-CCCEEEe-e-ccccCcccccCCCCcchhH-HHHH
Confidence            9999998531                    334455666655431 1346763 3 333211   1   113468 9999


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH---HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND---AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      +++.+.+.      .++++..+.||++...+........   ..............+..++|+++++..++....  ..|
T Consensus       138 ~~e~~~~~------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~--~~~  209 (318)
T 2r6j_A          138 MIRRAIEE------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR--ALN  209 (318)
T ss_dssp             HHHHHHHH------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG--GTT
T ss_pred             HHHHHHHh------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc--ccC
Confidence            99888753      2688888999987665432211100   000000001112336778999999999997642  236


Q ss_pred             cEEeeCC
Q 025259          243 ETLVVAG  249 (255)
Q Consensus       243 ~~i~~dg  249 (255)
                      +.+.+.|
T Consensus       210 ~~~~~~g  216 (318)
T 2r6j_A          210 RVVIYRP  216 (318)
T ss_dssp             EEEECCC
T ss_pred             eEEEecC
Confidence            7777764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.70  E-value=6.5e-17  Score=137.09  Aligned_cols=197  Identities=12%  Similarity=0.051  Sum_probs=129.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-h----HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-K----NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++||||+|+||++++++|++.|++|++++|+. +    ...+..+.+...  .+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~--~v~~v~~D~~d~~~l~~a~~-----   76 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSM--GVTIIEGEMEEHEKMVSVLK-----   76 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHT--TCEEEECCTTCHHHHHHHHT-----
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcC--CcEEEEecCCCHHHHHHHHc-----
Confidence            35799999999999999999999999999999986 2    122222233333  46788999999999888776     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC---C---CCChhh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP---P---SAMAMY  160 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~---~---~~~~~y  160 (255)
                        .+|+|||+++...                    +.++..+++++...- ...++|  .|..+...   .   +....|
T Consensus        77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v--~S~~g~~~~~~~~~~p~~~~y  131 (321)
T 3c1o_A           77 --QVDIVISALPFPM--------------------ISSQIHIINAIKAAG-NIKRFL--PSDFGCEEDRIKPLPPFESVL  131 (321)
T ss_dssp             --TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCCEEE--CSCCSSCGGGCCCCHHHHHHH
T ss_pred             --CCCEEEECCCccc--------------------hhhHHHHHHHHHHhC-CccEEe--ccccccCccccccCCCcchHH
Confidence              5999999999531                    445566666665431 024676  34433211   1   114578


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC------HHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                       .+|.+++.+++.    .  ++++..+.||++.+.+.......      ...............+..++|+|+++..++.
T Consensus       132 -~sK~~~e~~~~~----~--~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (321)
T 3c1o_A          132 -EKKRIIRRAIEA----A--ALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVAC  204 (321)
T ss_dssp             -HHHHHHHHHHHH----H--TCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHH----c--CCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHh
Confidence             999999988862    2  67888899998876543221110      0000000001112346788999999999987


Q ss_pred             CCCCCccccEEeeCC
Q 025259          235 DDASYITGETLVVAG  249 (255)
Q Consensus       235 ~~~~~~~G~~i~~dg  249 (255)
                      ...  ..|+.+.+.|
T Consensus       205 ~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          205 DPR--CCNRIVIYRP  217 (321)
T ss_dssp             CGG--GTTEEEECCC
T ss_pred             Ccc--ccCeEEEEeC
Confidence            643  3478888876

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.69  E-value=1.7e-16  Score=133.91  Aligned_cols=200  Identities=12%  Similarity=0.072  Sum_probs=132.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-----NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++||||+|+||++++++|++.|++|++++|+..     ..+. .+.+.  ...+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~-~~~~~--~~~~~~~~~D~~d~~~l~~~~~-----   75 (313)
T 1qyd_A            4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQM-LLYFK--QLGAKLIEASLDDHQRLVDALK-----   75 (313)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHH-HHHHH--TTTCEEECCCSSCHHHHHHHHT-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHH-HHHHH--hCCeEEEeCCCCCHHHHHHHHh-----
Confidence            357999999999999999999999999999999843     2222 22232  2357788999999999887765     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------C-CCCChh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------P-PSAMAM  159 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------~-~~~~~~  159 (255)
                        ++|++||+++... ..               .|+.++..+++++...- +-.++|+ | ..+..      + .+....
T Consensus        76 --~~d~vi~~a~~~~-~~---------------~~~~~~~~l~~aa~~~g-~v~~~v~-S-~~g~~~~~~~~~~~p~~~~  134 (313)
T 1qyd_A           76 --QVDVVISALAGGV-LS---------------HHILEQLKLVEAIKEAG-NIKRFLP-S-EFGMDPDIMEHALQPGSIT  134 (313)
T ss_dssp             --TCSEEEECCCCSS-SS---------------TTTTTHHHHHHHHHHSC-CCSEEEC-S-CCSSCTTSCCCCCSSTTHH
T ss_pred             --CCCEEEECCcccc-ch---------------hhHHHHHHHHHHHHhcC-CCceEEe-c-CCcCCccccccCCCCCcch
Confidence              6999999999753 11               26777788888777542 1347774 3 33311      1 133567


Q ss_pred             hHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH-------HHHHHhhccCCCCCCCChHHHHHHHHHh
Q 025259          160 YGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND-------AVRKALEGKTLLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~va~~~~~l  232 (255)
                      | .+|.+++.+.+.    .  ++++..+.||++.+.+........       ..............+..++|+|+++..+
T Consensus       135 y-~sK~~~e~~~~~----~--g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~  207 (313)
T 1qyd_A          135 F-IDKRKVRRAIEA----A--SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKS  207 (313)
T ss_dssp             H-HHHHHHHHHHHH----T--TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHH
T ss_pred             H-HHHHHHHHHHHh----c--CCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHH
Confidence            8 999999888752    2  788888999988765432211100       0000000001112357789999999999


Q ss_pred             cCCCCCCccccEEeeCC
Q 025259          233 ASDDASYITGETLVVAG  249 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dg  249 (255)
                      +....  ..|+.+.+.|
T Consensus       208 l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          208 IDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             TTCGG--GSSSEEECCC
T ss_pred             HhCcc--cCCceEEEeC
Confidence            97642  2367777765

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.67  E-value=5.5e-16  Score=139.89  Aligned_cols=204  Identities=14%  Similarity=0.088  Sum_probs=138.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++||||||+|+||++++++|++.|+.|++++|+.+..+              .+.+|+.+..         .+.+.++|
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~--------------~v~~d~~~~~---------~~~l~~~D  203 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPG--------------KRFWDPLNPA---------SDLLDGAD  203 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTT--------------CEECCTTSCC---------TTTTTTCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCcc--------------ceeecccchh---------HHhcCCCC
Confidence            679999999999999999999999999999999876421              1567776421         22335799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCChhh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~~y  160 (255)
                      +|||+||... ..   ..+.+..+..+++|+.++..+++++.... ...++|++||...+.           ...+...|
T Consensus       204 ~Vih~A~~~~-~~---~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~-~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y  278 (516)
T 3oh8_A          204 VLVHLAGEPI-FG---RFNDSHKEAIRESRVLPTKFLAELVAEST-QCTTMISASAVGFYGHDRGDEILTEESESGDDFL  278 (516)
T ss_dssp             EEEECCCC---------CCGGGHHHHHHHTHHHHHHHHHHHHHCS-SCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHH
T ss_pred             EEEECCCCcc-cc---ccchhHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEEeCcceEecCCCCCCccCCCCCCCcChH
Confidence            9999999753 11   33456678889999999999999855322 335899999976543           11245568


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhcc--C------CCCCCCChHHHHHHHHHh
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGK--T------LLNRLGTTGNMAAAIAFL  232 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~va~~~~~l  232 (255)
                      +.+|...+.+.+.....   +++++.+.||.+.++... .  ...+.......  .      ....+...+|+|++++.+
T Consensus       279 ~~~~~~~E~~~~~~~~~---gi~~~ilRp~~v~Gp~~~-~--~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~  352 (516)
T 3oh8_A          279 AEVCRDWEHATAPASDA---GKRVAFIRTGVALSGRGG-M--LPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRA  352 (516)
T ss_dssp             HHHHHHHHHTTHHHHHT---TCEEEEEEECEEEBTTBS-H--HHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhC---CCCEEEEEeeEEECCCCC-h--HHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHH
Confidence            88888877766543322   899999999999886421 0  01111111110  0      112356679999999999


Q ss_pred             cCCCCCCccccEEeeCCCcc
Q 025259          233 ASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~dgG~~  252 (255)
                      +....  ..| .+++.+|..
T Consensus       353 l~~~~--~~g-~~ni~~~~~  369 (516)
T 3oh8_A          353 IVDAQ--ISG-PINAVAPNP  369 (516)
T ss_dssp             HHCTT--CCE-EEEESCSCC
T ss_pred             HhCcc--cCC-cEEEECCCC
Confidence            86543  334 677777654

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.66  E-value=3.2e-16  Score=131.87  Aligned_cols=197  Identities=13%  Similarity=0.064  Sum_probs=127.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHH-----HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNV-----DKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++||||+|+||++++++|++.|+.|++++|+....     .+..+.+..  ..+.++.+|++|++++.++++     
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~--~~v~~v~~D~~d~~~l~~~~~-----   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKA--SGANIVHGSIDDHASLVEAVK-----   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT--TTCEEECCCTTCHHHHHHHHH-----
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHh--CCCEEEEeccCCHHHHHHHHc-----
Confidence            36799999999999999999999999999999985321     111222322  346788999999999888776     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----C-CCCChhh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----P-PSAMAMY  160 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----~-~~~~~~y  160 (255)
                        ++|++||+++...                    +.+...+++++...- +..++|+ | ..+..     + .+....|
T Consensus        77 --~~d~vi~~a~~~~--------------------~~~~~~l~~aa~~~g-~v~~~v~-S-~~g~~~~~~~~~~p~~~~y  131 (308)
T 1qyc_A           77 --NVDVVISTVGSLQ--------------------IESQVNIIKAIKEVG-TVKRFFP-S-EFGNDVDNVHAVEPAKSVF  131 (308)
T ss_dssp             --TCSEEEECCCGGG--------------------SGGGHHHHHHHHHHC-CCSEEEC-S-CCSSCTTSCCCCTTHHHHH
T ss_pred             --CCCEEEECCcchh--------------------hhhHHHHHHHHHhcC-CCceEee-c-ccccCccccccCCcchhHH
Confidence              6999999998531                    334556666665532 1346763 4 33321     1 1224568


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH------HHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND------AVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                       .+|.+++.+.+.    .  ++++..+.||++.+.+........      ..............+..++|+|+++..++.
T Consensus       132 -~sK~~~e~~~~~----~--~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~  204 (308)
T 1qyc_A          132 -EVKAKVRRAIEA----E--GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVD  204 (308)
T ss_dssp             -HHHHHHHHHHHH----H--TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSS
T ss_pred             -HHHHHHHHHHHh----c--CCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHh
Confidence             999999888763    2  688888999988765432211100      000000000112235678999999999987


Q ss_pred             CCCCCccccEEeeCC
Q 025259          235 DDASYITGETLVVAG  249 (255)
Q Consensus       235 ~~~~~~~G~~i~~dg  249 (255)
                      ...  ..|+.+.+.|
T Consensus       205 ~~~--~~~~~~~~~g  217 (308)
T 1qyc_A          205 DPR--TLNKTLYLRL  217 (308)
T ss_dssp             CGG--GTTEEEECCC
T ss_pred             Ccc--ccCeEEEEeC
Confidence            542  3367777765

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.55  E-value=1.7e-13  Score=114.85  Aligned_cols=202  Identities=18%  Similarity=0.159  Sum_probs=130.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|.||++++++|+++|++|+++.|++..            .++   ..|    + +      ..+.+..+|.+
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~------------~~~---~~~----~-~------~~~~l~~~d~v   55 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP------------GRI---TWD----E-L------AASGLPSCDAA   55 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT------------TEE---EHH----H-H------HHHCCCSCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc------------Cee---ecc----h-h------hHhhccCCCEE
Confidence            59999999999999999999999999999997642            111   111    1 0      11234579999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y~~  162 (255)
                      ||+|+... ..+....+.+...+.+++|+.++..+.+++...-.+...+|+.||...+.+           ..+...|+.
T Consensus        56 ihla~~~i-~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~  134 (298)
T 4b4o_A           56 VNLAGENI-LNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSN  134 (298)
T ss_dssp             EECCCCCS-SCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHH
T ss_pred             EEeccCcc-cchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHH
Confidence            99998643 334445567777889999999999999988876545556888887765432           123344555


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhh--ccCC------CCCCCChHHHHHHHHHhc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALE--GKTL------LNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~va~~~~~l~  233 (255)
                      .|...+..     ..... ++++..+.|+.+..+-....   ........  ...+      ...+...+|+++++.+++
T Consensus       135 ~~~~~e~~-----~~~~~~~~~~~~~r~~~v~g~~~~~~---~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~  206 (298)
T 4b4o_A          135 LVTKWEAA-----ARLPGDSTRQVVVRSGVVLGRGGGAM---GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHAL  206 (298)
T ss_dssp             HHHHHHHH-----HCCSSSSSEEEEEEECEEECTTSHHH---HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHH
T ss_pred             HHHHHHHH-----HHhhccCCceeeeeeeeEEcCCCCch---hHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHH
Confidence            55443321     12233 89999999999987632111   01111111  1111      122455799999999988


Q ss_pred             CCCCCCccccEEeeCCCccC
Q 025259          234 SDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ....  ..| ++++.++.+.
T Consensus       207 ~~~~--~~g-~yn~~~~~~~  223 (298)
T 4b4o_A          207 EANH--VHG-VLNGVAPSSA  223 (298)
T ss_dssp             HCTT--CCE-EEEESCSCCC
T ss_pred             hCCC--CCC-eEEEECCCcc
Confidence            6543  334 8888877654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.45  E-value=6e-15  Score=123.38  Aligned_cols=110  Identities=21%  Similarity=0.258  Sum_probs=82.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++||||+||+|+++++.|++.|++|++++|+.++.+++.+++... .++.++.+|++++++++++++       
T Consensus       116 ~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~-~~~~~~~~D~~~~~~~~~~~~-------  187 (287)
T 1lu9_A          116 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR-FKVNVTAAETADDASRAEAVK-------  187 (287)
T ss_dssp             CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HTCCCEEEECCSHHHHHHHTT-------
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc-CCcEEEEecCCCHHHHHHHHH-------
Confidence            478999999999999999999999999999999999998888888777553 135567899999988777665       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCH-HHHHHHHHHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKE-SVLDKLWEINVKSSI  126 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  126 (255)
                      .+|+||||+|......+..+.+. ++++..+++|+.+++
T Consensus       188 ~~DvlVn~ag~g~~~~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 GAHFVFTAGAIGLELLPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             TCSEEEECCCTTCCSBCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             hCCEEEECCCccccCCChhHcCchHHHHHHHHhhhhhhH
Confidence            48999999986421222212221 334445666666655

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.38  E-value=1e-12  Score=111.77  Aligned_cols=150  Identities=15%  Similarity=0.102  Sum_probs=105.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQ--KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .+++||||+|.||++++..|++.|.       .|+++++.+  +..+....++.+....+  + .|+++...+...++  
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~--~-~di~~~~~~~~a~~--   79 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPL--L-AGLEATDDPKVAFK--   79 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTT--E-EEEEEESCHHHHTT--
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccccc--c-CCeEeccChHHHhC--
Confidence            3799999999999999999999986       799999875  33333334444322122  2 46655444443332  


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc--------cC-CC
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG--------YQ-PP  154 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~--------~~-~~  154 (255)
                           ..|++||.||....  +  ..+   ..+.+++|+.++..+++++..+-....+++++|+...        .. +.
T Consensus        80 -----~~D~Vih~Ag~~~~--~--~~~---~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~  147 (327)
T 1y7t_A           80 -----DADYALLVGAAPRK--A--GME---RRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGL  147 (327)
T ss_dssp             -----TCSEEEECCCCCCC--T--TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTS
T ss_pred             -----CCCEEEECCCcCCC--C--CCC---HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCC
Confidence                 69999999997532  1  223   3457999999999999999886323457888887652        11 34


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~  179 (255)
                      ++...|+.+|...+.+.+.++..++
T Consensus       148 ~p~~~yg~tkl~~er~~~~~a~~~g  172 (327)
T 1y7t_A          148 NPRNFTAMTRLDHNRAKAQLAKKTG  172 (327)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             ChhheeccchHHHHHHHHHHHHHhC
Confidence            5566799999999999999988764

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.12  E-value=1.7e-10  Score=92.18  Aligned_cols=79  Identities=18%  Similarity=0.166  Sum_probs=61.6

Q ss_pred             cCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC
Q 025259            9 RFQGKVAVVTAS----------------TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN   72 (255)
Q Consensus         9 ~l~~k~vlVtG~----------------~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   72 (255)
                      +|+||++|||||                +|++|.++|+.|++.|+.|++++++.. ++     . ..+  +  -.+|+++
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~-----~-~~g--~--~~~dv~~   73 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP-----T-PPF--V--KRVDVMT   73 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC-----C-CTT--E--EEEECCS
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc-----c-CCC--C--eEEccCc
Confidence            588999999999                689999999999999999999887652 11     0 111  2  2467877


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        73 ~~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      .++   +++.+.+.++++|++|||||+..
T Consensus        74 ~~~---~~~~v~~~~~~~Dili~~Aav~d   99 (226)
T 1u7z_A           74 ALE---MEAAVNASVQQQNIFIGCAAVAD   99 (226)
T ss_dssp             HHH---HHHHHHHHGGGCSEEEECCBCCS
T ss_pred             HHH---HHHHHHHhcCCCCEEEECCcccC
Confidence            544   56677778899999999999864

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=99.00  E-value=3.8e-10  Score=85.69  Aligned_cols=78  Identities=18%  Similarity=0.128  Sum_probs=66.7

Q ss_pred             CchHHHHHHHHHHcCCeEEEEeCChhHHH---HHHHHHHHcCCeEEEEEecCCCH--HHHHHHHHHHHHHcCCCcEEEEC
Q 025259           22 QGIGLGVAERLGLEGASVVISSRKQKNVD---KAVEKLKALGIEVIGIICHVSNE--QHRKNLIDKTVEKYGRIDVFVLN   96 (255)
Q Consensus        22 ~giG~~~a~~l~~~G~~Vv~~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g~~d~lv~~   96 (255)
                      +.++.++++.|++.|++|++..|+.+..+   +..+.+++.|.++..+++|++++  ++++++++.+.+.+|+ |+||||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnn  104 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQAGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHC  104 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHTTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEEC
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHcCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEEC
Confidence            45789999999999999999988765432   24556677788999999999999  9999999999998999 999999


Q ss_pred             CCCC
Q 025259           97 AAVN  100 (255)
Q Consensus        97 ag~~  100 (255)
                      +|..
T Consensus       105 Agg~  108 (157)
T 3gxh_A          105 LANY  108 (157)
T ss_dssp             SBSH
T ss_pred             CCCC
Confidence            9963

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.99  E-value=2.2e-09  Score=76.81  Aligned_cols=75  Identities=15%  Similarity=0.093  Sum_probs=61.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++|+|+ |++|+++++.|++.| ++|++++|+++..+...    .  ..+..+.+|+++.+++.++++       .
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~--~~~~~~~~d~~~~~~~~~~~~-------~   69 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R--MGVATKQVDAKDEAGLAKALG-------G   69 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T--TTCEEEECCTTCHHHHHHHTT-------T
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h--CCCcEEEecCCCHHHHHHHHc-------C
Confidence            3578999999 999999999999999 88999999987766543    2  235568899999888776654       7


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|++|++++.
T Consensus        70 ~d~vi~~~~~   79 (118)
T 3ic5_A           70 FDAVISAAPF   79 (118)
T ss_dssp             CSEEEECSCG
T ss_pred             CCEEEECCCc
Confidence            9999999963

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=98.96  E-value=2.1e-10  Score=91.91  Aligned_cols=92  Identities=17%  Similarity=0.144  Sum_probs=64.8

Q ss_pred             CCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHH
Q 025259           11 QGKVAVVTAS----------------TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ   74 (255)
Q Consensus        11 ~~k~vlVtG~----------------~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~   74 (255)
                      +||++|||||                +|++|.++|+.|++.|+.|++++|+.... .      .....+..  .|+.   
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~-~------~~~~~~~~--~~v~---   69 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALK-P------EPHPNLSI--REIT---   69 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCC-C------CCCTTEEE--EECC---
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-c------cCCCCeEE--EEHh---
Confidence            5899999999                77899999999999999999999975321 0      00112322  3444   


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHH
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD  115 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~  115 (255)
                      +++++++.+.+.+++.|++|+||++.. +.+....+.+++.
T Consensus        70 s~~em~~~v~~~~~~~Dili~aAAvsD-~~p~~~~~~e~~~  109 (232)
T 2gk4_A           70 NTKDLLIEMQERVQDYQVLIHSMAVSD-YTPVYMTGLEEVQ  109 (232)
T ss_dssp             SHHHHHHHHHHHGGGCSEEEECSBCCS-EEEEEEEEHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEcCcccc-ccchhhcchhhhh
Confidence            566667777777889999999999875 4555444444443

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.90  E-value=2.7e-09  Score=83.79  Aligned_cols=103  Identities=15%  Similarity=0.242  Sum_probs=74.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++||||+||||.++++.+...|++|++++|+++..+..    ++.+...   .+|.++++..+.+.+...  .+++
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~--~~~~  108 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML----SRLGVEY---VGDSRSVDFADEILELTD--GYGV  108 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH----HTTCCSE---EEETTCSTHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHcCCCE---EeeCCcHHHHHHHHHHhC--CCCC
Confidence            589999999999999999999999999999999988765443    3344432   247776654444333221  1369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+|+|.            +               ..+...+.++++|++|.+++..
T Consensus       109 D~vi~~~g~------------~---------------~~~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          109 DVVLNSLAG------------E---------------AIQRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             EEEEECCCT------------H---------------HHHHHHHTEEEEEEEEECSCGG
T ss_pred             eEEEECCch------------H---------------HHHHHHHHhccCCEEEEEcCCC
Confidence            999999972            0               1355667788889999998754

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.83  E-value=2.5e-08  Score=87.01  Aligned_cols=81  Identities=15%  Similarity=0.176  Sum_probs=70.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC---CeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG---ASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G---~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+|+ |++|+++++.|++.|   ..|++++|+.+++++..+++... +.++..+.+|+++.+++++++++.     
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~-----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV-----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH-----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh-----
Confidence            47999999 899999999999998   38999999999999988888654 246788899999999999998875     


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      ++|+||||++.
T Consensus        76 ~~DvVin~ag~   86 (405)
T 4ina_A           76 KPQIVLNIALP   86 (405)
T ss_dssp             CCSEEEECSCG
T ss_pred             CCCEEEECCCc
Confidence            69999999985

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.82  E-value=1e-08  Score=87.06  Aligned_cols=104  Identities=14%  Similarity=0.247  Sum_probs=76.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||||++|+||.++++.+...|++|++++++++.++.. +   +.+...   .+|.++.+++.+.+.++..  +++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~---~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~  215 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K---QIGFDA---AFNYKTVNSLEEALKKASP--DGY  215 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HTTCSE---EEETTSCSCHHHHHHHHCT--TCE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---hcCCcE---EEecCCHHHHHHHHHHHhC--CCC
Confidence            589999999999999999999999999999999998776554 2   334332   3577763444444444432  579


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |++|+|+|.            +               ..+..++.++++|+++.++....
T Consensus       216 d~vi~~~g~------------~---------------~~~~~~~~l~~~G~~v~~g~~~~  248 (333)
T 1v3u_A          216 DCYFDNVGG------------E---------------FLNTVLSQMKDFGKIAICGAISV  248 (333)
T ss_dssp             EEEEESSCH------------H---------------HHHHHHTTEEEEEEEEECCCCC-
T ss_pred             eEEEECCCh------------H---------------HHHHHHHHHhcCCEEEEEecccc
Confidence            999999992            0               13455677888899999886543

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.81  E-value=1.3e-08  Score=87.72  Aligned_cols=107  Identities=18%  Similarity=0.186  Sum_probs=78.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++++++|+|+ |++|+++++.+...|++|++++|+++.++...+.   .+..   +.+|.++.+++++++.       
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~---~g~~---~~~~~~~~~~l~~~~~-------  228 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDV---FGGR---VITLTATEANIKKSVQ-------  228 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---TTTS---EEEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh---cCce---EEEecCCHHHHHHHHh-------
Confidence            578999999999 9999999999999999999999998876655432   2433   4567788877766654       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|++|++++.....                    .+..+.+..++.|++++.||++++..
T Consensus       229 ~~DvVi~~~g~~~~~--------------------~~~li~~~~l~~mk~gg~iV~v~~~~  269 (369)
T 2eez_A          229 HADLLIGAVLVPGAK--------------------APKLVTRDMLSLMKEGAVIVDVAVDQ  269 (369)
T ss_dssp             HCSEEEECCC---------------------------CCSCHHHHTTSCTTCEEEECC---
T ss_pred             CCCEEEECCCCCccc--------------------cchhHHHHHHHhhcCCCEEEEEecCC
Confidence            599999999963200                    11334567778888889999998754

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.76  E-value=2.3e-08  Score=85.41  Aligned_cols=104  Identities=13%  Similarity=0.168  Sum_probs=78.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|++|++|+++++.+...|++|++++|+++.++..    ++.+.+.   ..|.++.+++.+.+.++..  +++
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~----~~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~  239 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF----RSIGGEV---FIDFTKEKDIVGAVLKATD--GGA  239 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH----HHTTCCE---EEETTTCSCHHHHHHHHHT--SCE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH----HHcCCce---EEecCccHhHHHHHHHHhC--CCC
Confidence            589999999999999999999999999999999988776433    2345432   2477755555555555543  279


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+++|..                          ...+.+++.++++|+++.+++..
T Consensus       240 D~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          240 HGVINVSVSE--------------------------AAIEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             EEEEECSSCH--------------------------HHHHHHTTSEEEEEEEEECCCCT
T ss_pred             CEEEECCCcH--------------------------HHHHHHHHHHhcCCEEEEEeCCC
Confidence            9999999831                          04567778888889999998754

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.66  E-value=6.2e-08  Score=82.04  Aligned_cols=104  Identities=14%  Similarity=0.149  Sum_probs=75.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .++++|||||+|+||.++++.+...|++|++++++++.++...+    .+.+.   .+|.++++..+++.+...  ..++
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  210 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----AGAWQ---VINYREEDLVERLKEITG--GKKV  210 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHTT--TCCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCccHHHHHHHHhC--CCCc
Confidence            58999999999999999999999999999999999877655433    34332   246666555444433221  1269


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |++|+|+|. .                          ..+..++.++++|+++.+++..+
T Consensus       211 D~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (327)
T 1qor_A          211 RVVYDSVGR-D--------------------------TWERSLDCLQRRGLMVSFGNSSG  243 (327)
T ss_dssp             EEEEECSCG-G--------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCch-H--------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            999999992 1                          13566677888899999987643

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.65  E-value=1.6e-07  Score=79.72  Aligned_cols=151  Identities=12%  Similarity=0.070  Sum_probs=103.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCC----hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRK----QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      ..+|+||||+|.+|.+++..|+..|.       .|++++++    ++.++....++.+....+.   .|+....+....+
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence            35799999999999999999999885       79999998    6556665566655321111   2333322333333


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc--------cC
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG--------YQ  152 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~--------~~  152 (255)
                             ...|++||.||....+    ..+.   .+.+..|+.....+++.+..+-.+.++++++|+...        ..
T Consensus        82 -------~~aD~Vi~~ag~~~~~----g~~r---~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~  147 (329)
T 1b8p_A           82 -------KDADVALLVGARPRGP----GMER---KDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSA  147 (329)
T ss_dssp             -------TTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTC
T ss_pred             -------CCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHc
Confidence                   3799999999975321    2233   346899999999999999987435678999987552        12


Q ss_pred             -CCCCChhhHHhHHHHHHHHHHHHHHhC
Q 025259          153 -PPSAMAMYGVTKTALLGLTKALAAEMA  179 (255)
Q Consensus       153 -~~~~~~~y~~sKaa~~~l~~~la~e~~  179 (255)
                       ++|..-.|+.++---..+...++..++
T Consensus       148 ~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          148 PSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             TTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             CCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence             344444578876655667777777774

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.64  E-value=5.6e-08  Score=85.89  Aligned_cols=78  Identities=12%  Similarity=0.103  Sum_probs=62.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++++++|+| +|++|+++++.|++.|++|++++|+.+.+++..+.+    ..+..+.+|+++.+++.++++       .+
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~----~~~~~~~~Dv~d~~~l~~~l~-------~~   69 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGV----QHSTPISLDVNDDAALDAEVA-------KH   69 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTC----TTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhc----CCceEEEeecCCHHHHHHHHc-------CC
Confidence            368999997 799999999999999999999999987665543322    236778899999888777654       69


Q ss_pred             cEEEECCCCC
Q 025259           91 DVFVLNAAVN  100 (255)
Q Consensus        91 d~lv~~ag~~  100 (255)
                      |+||||++..
T Consensus        70 DvVIn~a~~~   79 (450)
T 1ff9_A           70 DLVISLIPYT   79 (450)
T ss_dssp             SEEEECCC--
T ss_pred             cEEEECCccc
Confidence            9999999864

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.64  E-value=8.5e-09  Score=85.92  Aligned_cols=81  Identities=15%  Similarity=0.208  Sum_probs=60.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++|||++ |+|+++++.|++.| +|++++|+.++++++.+++...+.....+.+|+++.          .+.++
T Consensus       125 ~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~----------~~~~~  192 (287)
T 1nvt_A          125 RVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL----------DVDLD  192 (287)
T ss_dssp             CCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT----------TCCCT
T ss_pred             CcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH----------HHhhC
Confidence            5789999999997 99999999999999 999999999888888777754210000122344431          23457


Q ss_pred             CCcEEEECCCCCC
Q 025259           89 RIDVFVLNAAVNP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      .+|++|||+|...
T Consensus       193 ~~DilVn~ag~~~  205 (287)
T 1nvt_A          193 GVDIIINATPIGM  205 (287)
T ss_dssp             TCCEEEECSCTTC
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.62  E-value=1.4e-07  Score=80.06  Aligned_cols=103  Identities=15%  Similarity=0.151  Sum_probs=74.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+++++||||+|+||.++++.+...|++|++++++++.++...+    .+.+.   .+|.++++..+++.+...  ..++
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~g~~~---~~d~~~~~~~~~i~~~~~--~~~~  215 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----LGCHH---TINYSTQDFAEVVREITG--GKGV  215 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHHT--TCCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCCE---EEECCCHHHHHHHHHHhC--CCCC
Confidence            58999999999999999999999999999999999877665432    34432   246666554444433221  1369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+|+|. .                          ..+..++.++++|+++.++...
T Consensus       216 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~iv~~g~~~  247 (333)
T 1wly_A          216 DVVYDSIGK-D--------------------------TLQKSLDCLRPRGMCAAYGHAS  247 (333)
T ss_dssp             EEEEECSCT-T--------------------------THHHHHHTEEEEEEEEECCCTT
T ss_pred             eEEEECCcH-H--------------------------HHHHHHHhhccCCEEEEEecCC
Confidence            999999994 1                          1445567778889999988654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.61  E-value=1.1e-10  Score=102.96  Aligned_cols=127  Identities=15%  Similarity=0.115  Sum_probs=75.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH------HHc--CCeEEEEEe---cCCCHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL------KAL--GIEVIGIIC---HVSNEQHRK   77 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~------~~~--~~~~~~~~~---D~~~~~~~~   77 (255)
                      ++.||+++|||++ +||+++++.|+..|++|+++++++....+.....      .+.  ..++.+...   |+-+.+   
T Consensus       262 ~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa~~g~dv~~lee~~~~aDvVi~atG~~~vl~~e---  337 (488)
T 3ond_A          262 MIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICALQATMEGLQVLTLEDVVSEADIFVTTTGNKDIIMLD---  337 (488)
T ss_dssp             CCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECCGGGTTTTCSEEEECSSCSCSBCHH---
T ss_pred             cccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHhCCccCCHHHHHHhcCEEEeCCCChhhhhHH---
Confidence            5889999999987 9999999999999999999999987655443321      000  122222111   111111   


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHH-------HHHHhHHHHHHH-HHHHhcccCCCeEEEEcCcC
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKL-------WEINVKSSILLM-QDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~-------~~~n~~~~~~~~-~~~~~~l~~~~~iv~vss~~  149 (255)
                       .++.     -+.+.+|+|+|..     ..+.+.+.++..       +..|+.+.+... +..++++ ..|+||++||..
T Consensus       338 -~l~~-----mk~gaiVvNaG~~-----~~Ei~~~~l~~~~~v~~~~i~~~v~~~~~~~fg~aI~lL-aeGRIVNlsS~~  405 (488)
T 3ond_A          338 -HMKK-----MKNNAIVCNIGHF-----DNEIDMLGLETHPGVKRITIKPQTDRWVFPETNTGIIIL-AEGRLMNLGCAT  405 (488)
T ss_dssp             -HHTT-----SCTTEEEEESSST-----TTTBTHHHHHTSTTCEEEEEETTEEEEECTTTCCEEEEE-GGGSCHHHHHSC
T ss_pred             -HHHh-----cCCCeEEEEcCCC-----CcccchHHHHHhhhhheEEeeeeEEEEEecchHHHHHHH-cCCcEEEEecCc
Confidence             1221     2567778888863     234455555544       223333322222 2333344 348999999987


Q ss_pred             cc
Q 025259          150 GY  151 (255)
Q Consensus       150 ~~  151 (255)
                      ++
T Consensus       406 G~  407 (488)
T 3ond_A          406 GH  407 (488)
T ss_dssp             CS
T ss_pred             cc
Confidence            65

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.59  E-value=5.5e-09  Score=94.17  Aligned_cols=100  Identities=17%  Similarity=0.178  Sum_probs=63.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++|||| ||+|++++.+|++.|++|++++|+.++++++.+++   +.++.    ++.+   +    ++.  ..+
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~---~~~~~----~~~d---l----~~~--~~~  423 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAI---GGKAL----SLTD---L----DNY--HPE  423 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHT---TC-CE----ETTT---T----TTC----C
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCcee----eHHH---h----hhc--ccc
Confidence            578999999999 59999999999999999999999998887776655   22222    2222   1    100  113


Q ss_pred             CCcEEEECCCCCCCC----CCcCCCCHHHHHHHHHHHhHHH
Q 025259           89 RIDVFVLNAAVNPYA----ADLLKTKESVLDKLWEINVKSS  125 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~n~~~~  125 (255)
                      .+|++|||+|....+    .++.+.+.+++..++++|+.+.
T Consensus       424 ~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          424 DGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             CSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             CceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            589999999975321    3455555555666666666554

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.58  E-value=5.9e-07  Score=75.48  Aligned_cols=84  Identities=19%  Similarity=0.305  Sum_probs=64.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK---QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|++++|+   .++.+++.+++..... ..+...++.+.+++.+.+.  
T Consensus       150 ~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~-~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          150 HDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTD-CKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSS-CEEEEEETTCHHHHHHHHH--
T ss_pred             CCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcC-CceEEeccchHHHHHhhhc--
Confidence            3578999999997 7999999999999999 79999999   8888888888866422 2223456666655554433  


Q ss_pred             HHHcCCCcEEEECCCCC
Q 025259           84 VEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                           ..|+|||+....
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 699999988654

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.56  E-value=1.4e-07  Score=80.36  Aligned_cols=104  Identities=17%  Similarity=0.263  Sum_probs=75.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|++|++|.++++.+...|++|+++++++++++.+.+   +.+...   .+|.++.+++.+.+.++..  +++
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~g~~~---~~d~~~~~~~~~~~~~~~~--~~~  226 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KFGFDD---AFNYKEESDLTAALKRCFP--NGI  226 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TSCCSE---EEETTSCSCSHHHHHHHCT--TCE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCce---EEecCCHHHHHHHHHHHhC--CCC
Confidence            58999999999999999999999999999999999877655432   235432   2466654344444444321  479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+|+|. .                          ..+..++.++++|+++.++...
T Consensus       227 d~vi~~~g~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          227 DIYFENVGG-K--------------------------MLDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             EEEEESSCH-H--------------------------HHHHHHTTEEEEEEEEECCCGG
T ss_pred             cEEEECCCH-H--------------------------HHHHHHHHHhcCCEEEEEcccc
Confidence            999999983 1                          1455677788889999987654

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.55  E-value=3.1e-07  Score=67.86  Aligned_cols=76  Identities=14%  Similarity=0.296  Sum_probs=59.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++.++++|+|+ |.+|+++++.|.+.|+.|++++++++..+...+    .+  ..++.+|.++++.++++      ....
T Consensus         4 ~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~--~~~~~gd~~~~~~l~~~------~~~~   70 (141)
T 3llv_A            4 NGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG--FDAVIADPTDESFYRSL------DLEG   70 (141)
T ss_dssp             --CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT--CEEEECCTTCHHHHHHS------CCTT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC--CcEEECCCCCHHHHHhC------Cccc
Confidence            34678999998 779999999999999999999999887665443    33  45678999998876654      1236


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      .|.+|.+.+
T Consensus        71 ~d~vi~~~~   79 (141)
T 3llv_A           71 VSAVLITGS   79 (141)
T ss_dssp             CSEEEECCS
T ss_pred             CCEEEEecC
Confidence            899998777

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.54  E-value=2.1e-07  Score=82.47  Aligned_cols=83  Identities=16%  Similarity=0.191  Sum_probs=62.7

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ....++++++++|+|+ |++|+++++.|++. |++|++++|+.++++++.+.   .  .+..+.+|+.+.+++.++++  
T Consensus        16 ~~~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~---~--~~~~~~~D~~d~~~l~~~l~--   87 (467)
T 2axq_A           16 HIEGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP---S--GSKAISLDVTDDSALDKVLA--   87 (467)
T ss_dssp             -------CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG---G--TCEEEECCTTCHHHHHHHHH--
T ss_pred             ccccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh---c--CCcEEEEecCCHHHHHHHHc--
Confidence            3455778899999997 99999999999998 78899999998877665433   2  24556799999888776664  


Q ss_pred             HHHcCCCcEEEECCCCC
Q 025259           84 VEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                           ++|+|||+++..
T Consensus        88 -----~~DvVIn~tp~~   99 (467)
T 2axq_A           88 -----DNDVVISLIPYT   99 (467)
T ss_dssp             -----TSSEEEECSCGG
T ss_pred             -----CCCEEEECCchh
Confidence                 699999999864

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.53  E-value=1.6e-07  Score=79.74  Aligned_cols=104  Identities=20%  Similarity=0.266  Sum_probs=75.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|++|+||.++++.+...|++|+++++++++++...+   +.+.+..   .|..+++..+.+.+..   .+++
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~---~~g~~~~---~~~~~~~~~~~~~~~~---~~~~  219 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE---ELGFDGA---IDYKNEDLAAGLKREC---PKGI  219 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TTCCSEE---EETTTSCHHHHHHHHC---TTCE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---HcCCCEE---EECCCHHHHHHHHHhc---CCCc
Confidence            58999999999999999999999999999999999877665433   3354332   4666544433332221   2469


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |++|+|+|..                           ..+..++.++++|+++.++....
T Consensus       220 d~vi~~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  252 (336)
T 4b7c_A          220 DVFFDNVGGE---------------------------ILDTVLTRIAFKARIVLCGAISQ  252 (336)
T ss_dssp             EEEEESSCHH---------------------------HHHHHHTTEEEEEEEEECCCGGG
T ss_pred             eEEEECCCcc---------------------------hHHHHHHHHhhCCEEEEEeeccc
Confidence            9999999831                           23556677888899999987653

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.52  E-value=2.1e-07  Score=79.72  Aligned_cols=103  Identities=15%  Similarity=0.195  Sum_probs=73.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|+||.++++.+...|++|+++++++++++.. .   +.+.+.   .+|.++++..+++.+...  ..++
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~---~~g~~~---~~~~~~~~~~~~~~~~~~--~~~~  232 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-E---KLGAAA---GFNYKKEDFSEATLKFTK--GAGV  232 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-H---HHTCSE---EEETTTSCHHHHHHHHTT--TSCE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H---HcCCcE---EEecCChHHHHHHHHHhc--CCCc
Confidence            589999999999999999999999999999999998776654 2   234432   356666544443332211  1369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+|+|...                           .+..++.++++|+++.++...
T Consensus       233 d~vi~~~G~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  264 (354)
T 2j8z_A          233 NLILDCIGGSY---------------------------WEKNVNCLALDGRWVLYGLMG  264 (354)
T ss_dssp             EEEEESSCGGG---------------------------HHHHHHHEEEEEEEEECCCTT
T ss_pred             eEEEECCCchH---------------------------HHHHHHhccCCCEEEEEeccC
Confidence            99999999410                           234456677889999988653

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.52  E-value=8.3e-08  Score=70.85  Aligned_cols=79  Identities=14%  Similarity=0.201  Sum_probs=57.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++++++|+|+ |.+|+.+++.|.+.|++|++++++++..+..    .+.+.  .++.+|.++++.+.++      ..
T Consensus         2 ~~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~----~~~~~--~~~~~d~~~~~~l~~~------~~   68 (144)
T 2hmt_A            2 GRIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAY----ASYAT--HAVIANATEENELLSL------GI   68 (144)
T ss_dssp             ----CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTT----TTTCS--EEEECCTTCHHHHHTT------TG
T ss_pred             CCCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHhCC--EEEEeCCCCHHHHHhc------CC
Confidence            3466788999998 9999999999999999999999987665432    22232  4567899887665433      12


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      .+.|++|++++.
T Consensus        69 ~~~d~vi~~~~~   80 (144)
T 2hmt_A           69 RNFEYVIVAIGA   80 (144)
T ss_dssp             GGCSEEEECCCS
T ss_pred             CCCCEEEECCCC
Confidence            369999999884

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.51  E-value=1.9e-07  Score=79.97  Aligned_cols=104  Identities=16%  Similarity=0.237  Sum_probs=73.6

Q ss_pred             CC--CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QG--KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~--k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .|  +++|||||+|+||.++++.+...|+ +|++++++++.++...++   .+...   .+|.++++..+.+ .+..  .
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~g~~~---~~d~~~~~~~~~~-~~~~--~  228 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---LGFDA---AINYKKDNVAEQL-RESC--P  228 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---SCCSE---EEETTTSCHHHHH-HHHC--T
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---cCCce---EEecCchHHHHHH-HHhc--C
Confidence            46  9999999999999999999999999 899999998776554332   34432   3566664333332 2221  1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +++|++|+|+|.            +               ..+.+++.++++|+++.++....
T Consensus       229 ~~~d~vi~~~G~------------~---------------~~~~~~~~l~~~G~iv~~G~~~~  264 (357)
T 2zb4_A          229 AGVDVYFDNVGG------------N---------------ISDTVISQMNENSHIILCGQISQ  264 (357)
T ss_dssp             TCEEEEEESCCH------------H---------------HHHHHHHTEEEEEEEEECCCGGG
T ss_pred             CCCCEEEECCCH------------H---------------HHHHHHHHhccCcEEEEECCccc
Confidence            269999999992            0               23456677788899999886543

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=98.46  E-value=5.1e-07  Score=79.71  Aligned_cols=109  Identities=18%  Similarity=0.233  Sum_probs=78.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEec--CC---------CHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH--VS---------NEQHRKNL   79 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D--~~---------~~~~~~~~   79 (255)
                      .|+++||+|++|+||...+..+...|++|+++++++++++.+    ++.|.+..+...|  +.         +.++++.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~  295 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV----RALGCDLVINRAELGITDDIADDPRRVVETGRKL  295 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HhcCCCEEEecccccccccccccccccchhhhHH
Confidence            589999999999999999999989999999999988776544    3445443332222  11         23455666


Q ss_pred             HHHHHHHcC-CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           80 IDKTVEKYG-RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        80 ~~~~~~~~g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      .+.+.+..+ ++|++|+++|..                           ..+..++.++++|++|.+++..+
T Consensus       296 ~~~v~~~~g~g~Dvvid~~G~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  340 (447)
T 4a0s_A          296 AKLVVEKAGREPDIVFEHTGRV---------------------------TFGLSVIVARRGGTVVTCGSSSG  340 (447)
T ss_dssp             HHHHHHHHSSCCSEEEECSCHH---------------------------HHHHHHHHSCTTCEEEESCCTTC
T ss_pred             HHHHHHHhCCCceEEEECCCch---------------------------HHHHHHHHHhcCCEEEEEecCCC
Confidence            677766555 699999999831                           01455667788999999987643

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.45  E-value=2.7e-07  Score=76.10  Aligned_cols=77  Identities=13%  Similarity=0.129  Sum_probs=58.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++++++.+++...+ .+.  .+|+   +++       .+  +
T Consensus       116 ~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~-~~~--~~~~---~~~-------~~--~  179 (271)
T 1nyt_A          116 IRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQ--ALSM---DEL-------EG--H  179 (271)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEE--ECCS---GGG-------TT--C
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccC-Cee--EecH---HHh-------cc--C
Confidence            578999999998 799999999999999999999999988888777664432 221  2332   211       11  5


Q ss_pred             CCcEEEECCCCCC
Q 025259           89 RIDVFVLNAAVNP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ..|++|+|++...
T Consensus       180 ~~DivVn~t~~~~  192 (271)
T 1nyt_A          180 EFDLIINATSSGI  192 (271)
T ss_dssp             CCSEEEECCSCGG
T ss_pred             CCCEEEECCCCCC
Confidence            8999999999653

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.41  E-value=9.1e-07  Score=75.35  Aligned_cols=102  Identities=17%  Similarity=0.247  Sum_probs=73.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      .++++||+|++|++|..+++.+...|++|+++++++++++...    +.+.+.   .+|.++++..+    .+.+..  .
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~----~~ga~~---~~d~~~~~~~~----~~~~~~~~~  234 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK----ALGADE---TVNYTHPDWPK----EVRRLTGGK  234 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTCSE---EEETTSTTHHH----HHHHHTTTT
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----hcCCCE---EEcCCcccHHH----HHHHHhCCC
Confidence            5899999999999999999999999999999999988776543    234432   24766654322    222222  3


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ++|++|+++| ..                          ..+..++.++++|+++.+++...
T Consensus       235 ~~d~vi~~~g-~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~  269 (343)
T 2eih_A          235 GADKVVDHTG-AL--------------------------YFEGVIKATANGGRIAIAGASSG  269 (343)
T ss_dssp             CEEEEEESSC-SS--------------------------SHHHHHHHEEEEEEEEESSCCCS
T ss_pred             CceEEEECCC-HH--------------------------HHHHHHHhhccCCEEEEEecCCC
Confidence            6999999999 32                          13455666778899999987643

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=98.39  E-value=6e-07  Score=76.58  Aligned_cols=104  Identities=13%  Similarity=0.181  Sum_probs=73.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .++++||+|++|++|..+++.+... |++|++++++++.++...    +.+.+..   .|.++++..+++ .++... ++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~-~~~~~~-~~  240 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGADYV---INASMQDPLAEI-RRITES-KG  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHHH-HHHTTT-SC
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HhCCCEE---ecCCCccHHHHH-HHHhcC-CC
Confidence            5899999999999999999999998 999999999987765542    2344332   355554433322 222111 47


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +|++|+|+|..                          ...+..++.++++|+++.++...
T Consensus       241 ~d~vi~~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          241 VDAVIDLNNSE--------------------------KTLSVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             EEEEEESCCCH--------------------------HHHTTGGGGEEEEEEEEECCSSC
T ss_pred             ceEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence            99999999941                          12455567777889999987653

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=98.38  E-value=9e-06  Score=68.75  Aligned_cols=118  Identities=17%  Similarity=0.211  Sum_probs=79.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCC--eEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGI--EVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+|+||||+|.+|.+++..|+..|  ..|++++++++  +....++.+...  ++..    +.+..+..++++      
T Consensus         8 ~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~~~~~~v~~----~~~t~d~~~al~------   75 (326)
T 1smk_A            8 GFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHMDTGAVVRG----FLGQQQLEAALT------   75 (326)
T ss_dssp             CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTSCSSCEEEE----EESHHHHHHHHT------
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcccccceEEE----EeCCCCHHHHcC------
Confidence            3479999999999999999999988  67999998876  333344544322  2222    223344443333      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       ..|++|+++|....++    .+.   .+.+..|+..+..+.+.+.++- +...|+++|....
T Consensus        76 -gaDvVi~~ag~~~~~g----~~r---~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~SNPv~  129 (326)
T 1smk_A           76 -GMDLIIVPAGVPRKPG----MTR---DDLFKINAGIVKTLCEGIAKCC-PRAIVNLISNPVN  129 (326)
T ss_dssp             -TCSEEEECCCCCCCSS----CCC---SHHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred             -CCCEEEEcCCcCCCCC----CCH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCchH
Confidence             7999999999643222    122   2448899999999999998864 4455666554443

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=98.38  E-value=1.9e-06  Score=73.71  Aligned_cols=103  Identities=15%  Similarity=0.211  Sum_probs=74.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|.++++.+...|++|+++++++++++...    +.+.+..   .|..+++..+.+.+ ..  .+++
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~~~~-~~--~~g~  236 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE----RLGAKRG---INYRSEDFAAVIKA-ET--GQGV  236 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHHHHH-HH--SSCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEE---EeCCchHHHHHHHH-Hh--CCCc
Confidence            5899999999999999999999999999999999988776543    2354432   35555444333333 22  3479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |++|+|+|..                           ..+..++.++++|+++.++...+
T Consensus       237 Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  269 (353)
T 4dup_A          237 DIILDMIGAA---------------------------YFERNIASLAKDGCLSIIAFLGG  269 (353)
T ss_dssp             EEEEESCCGG---------------------------GHHHHHHTEEEEEEEEECCCTTC
T ss_pred             eEEEECCCHH---------------------------HHHHHHHHhccCCEEEEEEecCC
Confidence            9999999841                           12345667788899999886543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=98.37  E-value=1.2e-06  Score=74.10  Aligned_cols=102  Identities=18%  Similarity=0.171  Sum_probs=73.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      .|+++||+||+|++|..+++.+...|++|+++++++++++...    +.+.+..   .|.++++..+.    +.+..  .
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~~~~----~~~~~~~~  208 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK----ALGAWET---IDYSHEDVAKR----VLELTDGK  208 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHH----HHHHTTTC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EeCCCccHHHH----HHHHhCCC
Confidence            4899999999999999999999999999999999988766543    3354332   35555443333    33322  2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ++|++|+|+|..                           ..+..++.++++|+++.++....
T Consensus       209 g~Dvvid~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~~~~  243 (325)
T 3jyn_A          209 KCPVVYDGVGQD---------------------------TWLTSLDSVAPRGLVVSFGNASG  243 (325)
T ss_dssp             CEEEEEESSCGG---------------------------GHHHHHTTEEEEEEEEECCCTTC
T ss_pred             CceEEEECCChH---------------------------HHHHHHHHhcCCCEEEEEecCCC
Confidence            699999999941                           23455677888899999987643

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.36  E-value=1.2e-06  Score=74.86  Aligned_cols=102  Identities=13%  Similarity=0.170  Sum_probs=71.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .++++||+|++|++|.++++.+...|++|++++++++.++..    ++.+.+.   .+|..+++..+++.+...  ..++
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~---~~d~~~~~~~~~~~~~~~--~~~~  240 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHE---VFNHREVNYIDKIKKYVG--EKGI  240 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSE---EEETTSTTHHHHHHHHHC--TTCE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH----HHcCCCE---EEeCCCchHHHHHHHHcC--CCCc
Confidence            589999999999999999999999999999999998776532    3345432   246666544443332211  1269


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |++|+|+|.            +.               .+..+..++++|+++.++..
T Consensus       241 D~vi~~~G~------------~~---------------~~~~~~~l~~~G~iv~~g~~  271 (351)
T 1yb5_A          241 DIIIEMLAN------------VN---------------LSKDLSLLSHGGRVIVVGSR  271 (351)
T ss_dssp             EEEEESCHH------------HH---------------HHHHHHHEEEEEEEEECCCC
T ss_pred             EEEEECCCh------------HH---------------HHHHHHhccCCCEEEEEecC
Confidence            999999983            11               12334566778899988753

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.35  E-value=1.7e-06  Score=74.29  Aligned_cols=99  Identities=12%  Similarity=0.179  Sum_probs=70.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++|+++||+|+ |++|..+++.+...|++|+++++++   ++.+..    ++.+.+.  +  | .+ +-.+++ .+ .. 
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~----~~~ga~~--v--~-~~-~~~~~~-~~-~~-  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI----EETKTNY--Y--N-SS-NGYDKL-KD-SV-  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH----HHHTCEE--E--E-CT-TCSHHH-HH-HH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH----HHhCCce--e--c-hH-HHHHHH-HH-hC-
Confidence            34999999999 9999999999999999999999988   665332    2335432  2  5 44 222222 22 22 


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHH-HHHHhcccCCCeEEEEcCcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM-QDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~~~~iv~vss~~  149 (255)
                       +++|++|+++|...                          .+ +..++.++++|++|.++...
T Consensus       245 -~~~d~vid~~g~~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  281 (366)
T 2cdc_A          245 -GKFDVIIDATGADV--------------------------NILGNVIPLLGRNGVLGLFGFST  281 (366)
T ss_dssp             -CCEEEEEECCCCCT--------------------------HHHHHHGGGEEEEEEEEECSCCC
T ss_pred             -CCCCEEEECCCChH--------------------------HHHHHHHHHHhcCCEEEEEecCC
Confidence             57999999999521                          23 66778888889999987653

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=98.33  E-value=2.3e-06  Score=70.85  Aligned_cols=81  Identities=12%  Similarity=0.092  Sum_probs=60.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||+|++++..|++.|+ +|++++|+.++.+++.+++......+.+...+..+   +.+.+.      
T Consensus       124 ~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~---l~~~l~------  193 (283)
T 3jyo_A          124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARG---IEDVIA------  193 (283)
T ss_dssp             TCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTT---HHHHHH------
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHH---HHHHHh------
Confidence            678999999998 7999999999999999 59999999999999888887643222222334323   222222      


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                       ..|+|||+....
T Consensus       194 -~~DiVInaTp~G  205 (283)
T 3jyo_A          194 -AADGVVNATPMG  205 (283)
T ss_dssp             -HSSEEEECSSTT
T ss_pred             -cCCEEEECCCCC
Confidence             489999988654

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=98.33  E-value=9.2e-07  Score=75.01  Aligned_cols=101  Identities=16%  Similarity=0.261  Sum_probs=72.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      .|+++||+||+|++|..++..+...|++|+++++++++++..    ++.+.+..   .|..+++..+.    +.+..  .
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~~~~~----~~~~~~~~  216 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA----KEYGAEYL---INASKEDILRQ----VLKFTNGK  216 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTTSCHHHH----HHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HHcCCcEE---EeCCCchHHHH----HHHHhCCC
Confidence            589999999999999999999999999999999988776533    33454433   35555433333    33322  2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|++|+|+|..                           ..+.+++.++++|+++.++...
T Consensus       217 g~D~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~  250 (334)
T 3qwb_A          217 GVDASFDSVGKD---------------------------TFEISLAALKRKGVFVSFGNAS  250 (334)
T ss_dssp             CEEEEEECCGGG---------------------------GHHHHHHHEEEEEEEEECCCTT
T ss_pred             CceEEEECCChH---------------------------HHHHHHHHhccCCEEEEEcCCC
Confidence            699999999941                           1345566778889999998654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.28  E-value=4.6e-06  Score=71.59  Aligned_cols=107  Identities=18%  Similarity=0.114  Sum_probs=73.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++++++|+|+ |++|+++++.+...|++|++++|++++++...+....   .+.   ++..+.+.+.+.+.       
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~~---~~~---~~~~~~~~~~~~~~-------  229 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGS---RVE---LLYSNSAEIETAVA-------  229 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGG---GSE---EEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhCc---eeE---eeeCCHHHHHHHHc-------
Confidence            367899999999 9999999999999999999999999887766544321   111   12234444433222       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|++|++++......+                    ..+.+...+.|++++.|+.+++..
T Consensus       230 ~~DvVI~~~~~~~~~~~--------------------~li~~~~~~~~~~g~~ivdv~~~~  270 (361)
T 1pjc_A          230 EADLLIGAVLVPGRRAP--------------------ILVPASLVEQMRTGSVIVDVAVDQ  270 (361)
T ss_dssp             TCSEEEECCCCTTSSCC--------------------CCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CCCEEEECCCcCCCCCC--------------------eecCHHHHhhCCCCCEEEEEecCC
Confidence            69999999986321111                    111234456777888899888654

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=98.26  E-value=1.1e-05  Score=68.73  Aligned_cols=103  Identities=13%  Similarity=0.122  Sum_probs=72.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++++|+||+|++|...+..+...|++|+++++++++++.+.    +.|.+..   .|..+++..+.+.+....  .++|
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~~~~v~~~~~~--~g~D  235 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK----DIGAAHV---LNEKAPDFEATLREVMKA--EQPR  235 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH----HHTCSEE---EETTSTTHHHHHHHHHHH--HCCC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCCEE---EECCcHHHHHHHHHHhcC--CCCc
Confidence            489999999999999999999889999999999988876543    3354432   345544433333222211  2799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ++++++|..                           ..+.+++.++++|+++.+++...
T Consensus       236 ~vid~~g~~---------------------------~~~~~~~~l~~~G~iv~~G~~~~  267 (349)
T 3pi7_A          236 IFLDAVTGP---------------------------LASAIFNAMPKRARWIIYGRLDP  267 (349)
T ss_dssp             EEEESSCHH---------------------------HHHHHHHHSCTTCEEEECCCSCC
T ss_pred             EEEECCCCh---------------------------hHHHHHhhhcCCCEEEEEeccCC
Confidence            999999841                           01344567788999999986543

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.26  E-value=3.1e-06  Score=73.02  Aligned_cols=106  Identities=18%  Similarity=0.159  Sum_probs=75.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.+++++|+|+ |++|+++++.+...|++|++++|+++.++...+.+   +..+   .++..+.+.+.+++.       
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~---g~~~---~~~~~~~~~l~~~l~-------  230 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF---CGRI---HTRYSSAYELEGAVK-------  230 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSS---EEEECCHHHHHHHHH-------
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc---CCee---EeccCCHHHHHHHHc-------
Confidence            578999999998 99999999999999999999999988776554322   3332   233445555554443       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..|++|++++... .    +.               ...+.+..++.|++++.||++++.
T Consensus       231 ~aDvVi~~~~~p~-~----~t---------------~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          231 RADLVIGAVLVPG-A----KA---------------PKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             HCSEEEECCCCTT-S----CC---------------CCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             CCCEEEECCCcCC-C----CC---------------cceecHHHHhcCCCCcEEEEEecC
Confidence            5899999988532 1    10               012245566778888899999854

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=98.26  E-value=1e-05  Score=67.95  Aligned_cols=146  Identities=14%  Similarity=0.123  Sum_probs=92.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeC--ChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSR--KQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r--~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++||||+|.+|.+++..|+..|.  .++++++  +++.++....++.+.    +.++.+...|    +++...      
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~~a------   71 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENLRI------   71 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCGGG------
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchHHH------
Confidence            689999999999999999998875  4888999  665555544444332    1222222211    011111      


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc--------CCCCCC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY--------QPPSAM  157 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~--------~~~~~~  157 (255)
                       +...|++||.||....++    .+.   .+.+..|+..+..+.+++..+-  +..++++|.....        .+.|+.
T Consensus        72 -l~gaD~Vi~~Ag~~~~~g----~~r---~dl~~~N~~i~~~i~~~i~~~~--~~~vlv~SNPv~~~t~~~~k~~~~p~~  141 (313)
T 1hye_A           72 -IDESDVVIITSGVPRKEG----MSR---MDLAKTNAKIVGKYAKKIAEIC--DTKIFVITNPVDVMTYKALVDSKFERN  141 (313)
T ss_dssp             -GTTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHC--CCEEEECSSSHHHHHHHHHHHHCCCTT
T ss_pred             -hCCCCEEEECCCCCCCCC----CcH---HHHHHHHHHHHHHHHHHHHHhC--CeEEEEecCcHHHHHHHHHHhhCcChh
Confidence             237999999999743221    233   3459999999999999999875  4456666554432        234555


Q ss_pred             hhhHH-hHHHHHHHHHHHHHHhC
Q 025259          158 AMYGV-TKTALLGLTKALAAEMA  179 (255)
Q Consensus       158 ~~y~~-sKaa~~~l~~~la~e~~  179 (255)
                      -.++. ..---..+...++..++
T Consensus       142 rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          142 QVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             SEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cEEEeCccHHHHHHHHHHHHHhC
Confidence            55666 45445566666666664

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=98.25  E-value=2.2e-06  Score=72.89  Aligned_cols=101  Identities=15%  Similarity=0.145  Sum_probs=71.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      .|+++||+|++|++|..++..+...|++|+++++++++++.+.+    .+.+..   .|..+++..+    .+.+..  .
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----lga~~~---~~~~~~~~~~----~~~~~~~~~  212 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----LGAAYV---IDTSTAPLYE----TVMELTNGI  212 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----HTCSEE---EETTTSCHHH----HHHHHTTTS
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----CCCcEE---EeCCcccHHH----HHHHHhCCC
Confidence            58999999999999999999888899999999999887765433    354433   3555543333    233322  2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|++|+|+|...            .               ......++++|+++.++...
T Consensus       213 g~Dvvid~~g~~~------------~---------------~~~~~~l~~~G~iv~~G~~~  246 (340)
T 3gms_A          213 GADAAIDSIGGPD------------G---------------NELAFSLRPNGHFLTIGLLS  246 (340)
T ss_dssp             CEEEEEESSCHHH------------H---------------HHHHHTEEEEEEEEECCCTT
T ss_pred             CCcEEEECCCChh------------H---------------HHHHHHhcCCCEEEEEeecC
Confidence            6999999999410            0               11235677889999998654

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=98.23  E-value=5.5e-06  Score=73.29  Aligned_cols=108  Identities=17%  Similarity=0.191  Sum_probs=78.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEec----------CCCHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH----------VSNEQHRKNLI   80 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D----------~~~~~~~~~~~   80 (255)
                      .|++|||+|++|++|...+..+...|++|+++++++++++.+    ++.|.+..+...+          ..+.++++.+.
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~----~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~  303 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC----RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFG  303 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH----HhhCCcEEEecCcCcccccccccccchHHHHHHH
Confidence            588999999999999999998888999999999888776544    3345443332211          24567777777


Q ss_pred             HHHHHHcC--CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           81 DKTVEKYG--RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        81 ~~~~~~~g--~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +.+.+..+  ++|++|.++|. .                          ..+..+..++++|+++.+++..
T Consensus       304 ~~i~~~t~g~g~Dvvid~~G~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~  347 (456)
T 3krt_A          304 KRIRELTGGEDIDIVFEHPGR-E--------------------------TFGASVFVTRKGGTITTCASTS  347 (456)
T ss_dssp             HHHHHHHTSCCEEEEEECSCH-H--------------------------HHHHHHHHEEEEEEEEESCCTT
T ss_pred             HHHHHHhCCCCCcEEEEcCCc-h--------------------------hHHHHHHHhhCCcEEEEEecCC
Confidence            88877543  69999999983 1                          1234556677889999988654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.22  E-value=1.1e-05  Score=67.60  Aligned_cols=83  Identities=13%  Similarity=0.253  Sum_probs=61.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC---hhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK---QKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|+++.|+   .++.+++.+++... +..+.  ..+..+.+.....+. 
T Consensus       144 ~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~--~~~~~~l~~~~~~l~-  219 (312)
T 3t4e_A          144 FDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVT--VTDLADQHAFTEALA-  219 (312)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEE--EEETTCHHHHHHHHH-
T ss_pred             CCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceE--EechHhhhhhHhhcc-
Confidence            3578999999997 8999999999999998 69999999   77788888777654 33333  345555433222222 


Q ss_pred             HHHHcCCCcEEEECCCCC
Q 025259           83 TVEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~  100 (255)
                            ..|+|||+....
T Consensus       220 ------~~DiIINaTp~G  231 (312)
T 3t4e_A          220 ------SADILTNGTKVG  231 (312)
T ss_dssp             ------HCSEEEECSSTT
T ss_pred             ------CceEEEECCcCC
Confidence                  589999987754

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=98.19  E-value=1.9e-05  Score=66.10  Aligned_cols=114  Identities=12%  Similarity=0.035  Sum_probs=78.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeC--ChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSR--KQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r--~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +++||||+|.+|.+++..|+..|.  .++++++  +++.++....++.+.   ..++.+.. +  +.+.           
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~~a-----------   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GYED-----------   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CGGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CHHH-----------
Confidence            699999999999999999998875  5889999  776666555555443   22222222 2  2111           


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +...|++||+||....++    .+.+   +.+..|+..+..+.+.+..+ .+...|+++|...
T Consensus        68 ~~~aDvVi~~ag~~~~~g----~~r~---dl~~~N~~i~~~i~~~i~~~-~p~~~viv~SNPv  122 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQPG----QTRI---DLAGDNAPIMEDIQSSLDEH-NDDYISLTTSNPV  122 (303)
T ss_dssp             GTTCSEEEECCCCCCCTT----CCHH---HHHHHHHHHHHHHHHHHHTT-CSCCEEEECCSSH
T ss_pred             hCCCCEEEEcCCCCCCCC----CCHH---HHHHHHHHHHHHHHHHHHHH-CCCcEEEEeCChH
Confidence            237999999999743221    2333   45899999999999999987 3455666655444

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=98.18  E-value=8.6e-06  Score=69.17  Aligned_cols=101  Identities=20%  Similarity=0.307  Sum_probs=72.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|..+++.+...|++|+++++++++++..    ++.+.+.   ..|.++++-.+. +.++.   +++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~---~~d~~~~~~~~~-~~~~~---~~~  231 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGADL---VVNPLKEDAAKF-MKEKV---GGV  231 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTCSE---EECTTTSCHHHH-HHHHH---SSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH----HHCCCCE---EecCCCccHHHH-HHHHh---CCC
Confidence            5889999999 8899999999999999999999998876644    2345442   246665432222 22222   579


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+++|..           +               ..+..++.++++|+++.+++..
T Consensus       232 d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~  264 (339)
T 1rjw_A          232 HAAVVTAVSK-----------P---------------AFQSAYNSIRRGGACVLVGLPP  264 (339)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             CEEEECCCCH-----------H---------------HHHHHHHHhhcCCEEEEecccC
Confidence            9999999841           1               2455666777889999987654

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=98.17  E-value=7.1e-06  Score=69.78  Aligned_cols=100  Identities=16%  Similarity=0.240  Sum_probs=68.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   88 (255)
                      .|+++||+||+|++|..++..+...|++|+++++++++.+...+    .+.+..   .|..  +.+   .+.+.+.. + 
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~ga~~v---~~~~--~~~---~~~v~~~~~~~  226 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----VGADIV---LPLE--EGW---AKAVREATGGA  226 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----HTCSEE---EESS--TTH---HHHHHHHTTTS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEE---ecCc--hhH---HHHHHHHhCCC
Confidence            58999999999999999999999999999999999887754432    354432   2333  222   23333333 2 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|++|+|+|...                           .+..+..++++|+++.++...
T Consensus       227 g~Dvvid~~g~~~---------------------------~~~~~~~l~~~G~iv~~G~~~  260 (342)
T 4eye_A          227 GVDMVVDPIGGPA---------------------------FDDAVRTLASEGRLLVVGFAA  260 (342)
T ss_dssp             CEEEEEESCC--C---------------------------HHHHHHTEEEEEEEEEC----
T ss_pred             CceEEEECCchhH---------------------------HHHHHHhhcCCCEEEEEEccC
Confidence            5999999999410                           234566777889999887543

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=98.16  E-value=5.9e-06  Score=70.89  Aligned_cols=103  Identities=17%  Similarity=0.186  Sum_probs=71.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|..+++.+...|++|+++++++++++...    +.+.+..   .|..+++ +.+.+.+..  .+++
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~-~~~~~~~~~--~~g~  232 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK----SLGCDRP---INYKTEP-VGTVLKQEY--PEGV  232 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCSEE---EETTTSC-HHHHHHHHC--TTCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HcCCcEE---EecCChh-HHHHHHHhc--CCCC
Confidence            5899999999999999999999999999999999987765443    3454432   3444432 222222221  1369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |++|+|+|.            +               ..+.+++.++++|+++.+++...
T Consensus       233 D~vid~~g~------------~---------------~~~~~~~~l~~~G~iv~~g~~~~  265 (362)
T 2c0c_A          233 DVVYESVGG------------A---------------MFDLAVDALATKGRLIVIGFISG  265 (362)
T ss_dssp             EEEEECSCT------------H---------------HHHHHHHHEEEEEEEEECCCGGG
T ss_pred             CEEEECCCH------------H---------------HHHHHHHHHhcCCEEEEEeCCCC
Confidence            999999982            0               13345666778899999987654

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=98.14  E-value=9.5e-06  Score=66.82  Aligned_cols=77  Identities=12%  Similarity=0.174  Sum_probs=58.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++++|+++|+|+ ||+|++++..|++.|++|++++|+.++.+++.+++...+ ++..  +|+   +++.        . +
T Consensus       116 ~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~-~~~~--~~~---~~~~--------~-~  179 (272)
T 1p77_A          116 LRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQA--VSM---DSIP--------L-Q  179 (272)
T ss_dssp             CCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEE--EEG---GGCC--------C-S
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccC-CeEE--eeH---HHhc--------c-C
Confidence            578999999998 799999999999999999999999999888887775432 2322  333   1110        0 4


Q ss_pred             CCcEEEECCCCCC
Q 025259           89 RIDVFVLNAAVNP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ..|++|++.+...
T Consensus       180 ~~DivIn~t~~~~  192 (272)
T 1p77_A          180 TYDLVINATSAGL  192 (272)
T ss_dssp             CCSEEEECCCC--
T ss_pred             CCCEEEECCCCCC
Confidence            7999999999653

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=98.07  E-value=1.6e-05  Score=58.02  Aligned_cols=75  Identities=13%  Similarity=0.231  Sum_probs=55.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +.+++|+|+ |.+|..+++.|.+.|++|++++++++..+...+   ..+  +.++..|.++++.+.+.      ...+.|
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~--~~~~~~d~~~~~~l~~~------~~~~~d   71 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EID--ALVINGDCTKIKTLEDA------GIEDAD   71 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCS--SEEEESCTTSHHHHHHT------TTTTCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcC--cEEEEcCCCCHHHHHHc------CcccCC
Confidence            457999987 999999999999999999999998876654432   123  34567888887664321      124689


Q ss_pred             EEEECCC
Q 025259           92 VFVLNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      ++|.+.+
T Consensus        72 ~vi~~~~   78 (140)
T 1lss_A           72 MYIAVTG   78 (140)
T ss_dssp             EEEECCS
T ss_pred             EEEEeeC
Confidence            9999975

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.07  E-value=2.9e-05  Score=57.98  Aligned_cols=78  Identities=13%  Similarity=0.131  Sum_probs=58.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..++++|.|+ |.+|+.+++.|.+.|+.|+++++++ +..+......   ...+.++.+|.++++.++++      ...+
T Consensus         2 ~~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a------~i~~   71 (153)
T 1id1_A            2 RKDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKA------GIDR   71 (153)
T ss_dssp             CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHH------TTTT
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHc------Chhh
Confidence            3567889986 9999999999999999999999974 4444443322   22356788999998876553      1237


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      .|.+|.+.+
T Consensus        72 ad~vi~~~~   80 (153)
T 1id1_A           72 CRAILALSD   80 (153)
T ss_dssp             CSEEEECSS
T ss_pred             CCEEEEecC
Confidence            899998876

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=98.04  E-value=1.8e-05  Score=65.98  Aligned_cols=97  Identities=16%  Similarity=0.301  Sum_probs=67.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g~   89 (255)
                      .|++++|+|++|++|..++..+...|++|+++++++++.+..    ++.+.+..   .|..+ ++..    +.+    ++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~----~~~ga~~~---~~~~~~~~~~----~~~----~~  189 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEA---ATYAEVPERA----KAW----GG  189 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEE---EEGGGHHHHH----HHT----TS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH----HhcCCCEE---EECCcchhHH----HHh----cC
Confidence            589999999999999999999989999999999998876554    23454322   35544 3222    222    47


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +|++|+ +|. . .                         .+...+.++++|+++.++....
T Consensus       190 ~d~vid-~g~-~-~-------------------------~~~~~~~l~~~G~~v~~g~~~~  222 (302)
T 1iz0_A          190 LDLVLE-VRG-K-E-------------------------VEESLGLLAHGGRLVYIGAAEG  222 (302)
T ss_dssp             EEEEEE-CSC-T-T-------------------------HHHHHTTEEEEEEEEEC-----
T ss_pred             ceEEEE-CCH-H-H-------------------------HHHHHHhhccCCEEEEEeCCCC
Confidence            999999 884 1 0                         3556677888899998876543

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=98.03  E-value=1e-05  Score=69.55  Aligned_cols=99  Identities=11%  Similarity=0.172  Sum_probs=71.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|..++..+...|++|+++++++++.+...+   +.|.+..   .|..+++.+.+       ..+++
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---~~~~~~~~~~~-------~~~~~  252 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NFGADSF---LVSRDQEQMQA-------AAGTL  252 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TSCCSEE---EETTCHHHHHH-------TTTCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcCCceE---EeccCHHHHHH-------hhCCC
Confidence            6899999996 999999999998899999999999887655432   3454432   35666543322       23579


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|+++|...                          ..+..++.++++|+++.+++..
T Consensus       253 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~~  285 (366)
T 1yqd_A          253 DGIIDTVSAVH--------------------------PLLPLFGLLKSHGKLILVGAPE  285 (366)
T ss_dssp             EEEEECCSSCC--------------------------CSHHHHHHEEEEEEEEECCCCS
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEEccCC
Confidence            99999999531                          1234456677789999998754

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.98  E-value=9.5e-06  Score=60.87  Aligned_cols=81  Identities=15%  Similarity=0.188  Sum_probs=57.4

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |..++.+++++|.|+ |.+|..+++.|.+.|+.|++++|+++..+....   ..+  ..++..|.++++.+.++      
T Consensus        13 ~~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~~g--~~~~~~d~~~~~~l~~~------   80 (155)
T 2g1u_A           13 MSKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---EFS--GFTVVGDAAEFETLKEC------   80 (155)
T ss_dssp             ----CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---TCC--SEEEESCTTSHHHHHTT------
T ss_pred             hhcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---cCC--CcEEEecCCCHHHHHHc------
Confidence            556778999999996 999999999999999999999999876543221   223  33566788876554321      


Q ss_pred             HcCCCcEEEECCC
Q 025259           86 KYGRIDVFVLNAA   98 (255)
Q Consensus        86 ~~g~~d~lv~~ag   98 (255)
                      .....|++|.+.+
T Consensus        81 ~~~~ad~Vi~~~~   93 (155)
T 2g1u_A           81 GMEKADMVFAFTN   93 (155)
T ss_dssp             TGGGCSEEEECSS
T ss_pred             CcccCCEEEEEeC
Confidence            1236899999887

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.98  E-value=2.1e-05  Score=66.93  Aligned_cols=99  Identities=10%  Similarity=0.227  Sum_probs=69.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-GR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   89 (255)
                      .|+++||+||+|++|...+..+...|++|+++++++++++.+.+    .|.+..   .|..+ + +   .+.+.+.. ++
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~v---i~~~~-~-~---~~~~~~~~~~g  217 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKK----MGADIV---LNHKE-S-L---LNQFKTQGIEL  217 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHH----HTCSEE---ECTTS-C-H---HHHHHHHTCCC
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----cCCcEE---EECCc-c-H---HHHHHHhCCCC
Confidence            58999999999999999999998899999999998877655433    354432   23332 1 2   23333333 36


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +|++++++|..                          ...+.+++.++++|++|.+++
T Consensus       218 ~Dvv~d~~g~~--------------------------~~~~~~~~~l~~~G~iv~~~~  249 (346)
T 3fbg_A          218 VDYVFCTFNTD--------------------------MYYDDMIQLVKPRGHIATIVA  249 (346)
T ss_dssp             EEEEEESSCHH--------------------------HHHHHHHHHEEEEEEEEESSC
T ss_pred             ccEEEECCCch--------------------------HHHHHHHHHhccCCEEEEECC
Confidence            99999998841                          123455666778899988764

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.96  E-value=1.3e-05  Score=66.89  Aligned_cols=78  Identities=14%  Similarity=0.163  Sum_probs=57.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++++++|+|+ |++|++++..|++.|+ +|++++|+.++.+++.+++.....++       .+.++       +.+..
T Consensus       138 ~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~-------~~~~~-------~~~~~  202 (297)
T 2egg_A          138 TLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAY-------FSLAE-------AETRL  202 (297)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCE-------ECHHH-------HHHTG
T ss_pred             CCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCce-------eeHHH-------HHhhh
Confidence            578999999998 7899999999999998 79999999988877766542211111       11122       22333


Q ss_pred             CCCcEEEECCCCCC
Q 025259           88 GRIDVFVLNAAVNP  101 (255)
Q Consensus        88 g~~d~lv~~ag~~~  101 (255)
                      ...|+||++.+...
T Consensus       203 ~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 AEYDIIINTTSVGM  216 (297)
T ss_dssp             GGCSEEEECSCTTC
T ss_pred             ccCCEEEECCCCCC
Confidence            47999999998653

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.96  E-value=3.8e-05  Score=66.07  Aligned_cols=99  Identities=13%  Similarity=0.142  Sum_probs=67.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|...+..+...|++|+++++ +++.+.    +++.|.+..   .|..+++..+    ++.+ .+++
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~----~~~lGa~~v---~~~~~~~~~~----~~~~-~~g~  249 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASEL----VRKLGADDV---IDYKSGSVEE----QLKS-LKPF  249 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHH----HHHTTCSEE---EETTSSCHHH----HHHT-SCCB
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHH----HHHcCCCEE---EECCchHHHH----HHhh-cCCC
Confidence            5899999999999999999888889999988884 444433    344565433   3554433222    2222 2579


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      |++|+++|...                         ...+..+..++++|+++.+++
T Consensus       250 D~vid~~g~~~-------------------------~~~~~~~~~l~~~G~iv~~g~  281 (375)
T 2vn8_A          250 DFILDNVGGST-------------------------ETWAPDFLKKWSGATYVTLVT  281 (375)
T ss_dssp             SEEEESSCTTH-------------------------HHHGGGGBCSSSCCEEEESCC
T ss_pred             CEEEECCCChh-------------------------hhhHHHHHhhcCCcEEEEeCC
Confidence            99999999420                         123444566788899998875

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.96  E-value=4.3e-05  Score=63.14  Aligned_cols=75  Identities=20%  Similarity=0.284  Sum_probs=58.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++...+ .+.....+  +   +.          
T Consensus       123 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~-~~~~~~~~--~---l~----------  185 (281)
T 3o8q_A          123 LLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYG-EVKAQAFE--Q---LK----------  185 (281)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGG--G---CC----------
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccC-CeeEeeHH--H---hc----------
Confidence            578999999998 6999999999999996 79999999999988888876543 33333221  1   10          


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus       186 ~~aDiIInaTp~g  198 (281)
T 3o8q_A          186 QSYDVIINSTSAS  198 (281)
T ss_dssp             SCEEEEEECSCCC
T ss_pred             CCCCEEEEcCcCC
Confidence            3689999988754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.95  E-value=2.5e-05  Score=66.38  Aligned_cols=100  Identities=11%  Similarity=0.150  Sum_probs=67.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|..++..+...|++|+++ +++++++..    ++.+.+.    .| .+++..+. +.+... ..++
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~----~~lGa~~----i~-~~~~~~~~-~~~~~~-~~g~  217 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV----RDLGATP----ID-ASREPEDY-AAEHTA-GQGF  217 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH----HHHTSEE----EE-TTSCHHHH-HHHHHT-TSCE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH----HHcCCCE----ec-cCCCHHHH-HHHHhc-CCCc
Confidence            58999999999999999999999999999988 776665433    3446543    34 33222222 222211 1269


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.++|.   .                        ..+..++.++++|++|.++...
T Consensus       218 D~vid~~g~---~------------------------~~~~~~~~l~~~G~iv~~g~~~  249 (343)
T 3gaz_A          218 DLVYDTLGG---P------------------------VLDASFSAVKRFGHVVSCLGWG  249 (343)
T ss_dssp             EEEEESSCT---H------------------------HHHHHHHHEEEEEEEEESCCCS
T ss_pred             eEEEECCCc---H------------------------HHHHHHHHHhcCCeEEEEcccC
Confidence            999999983   1                        1345556677889999887643

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.94  E-value=5e-05  Score=64.60  Aligned_cols=101  Identities=17%  Similarity=0.254  Sum_probs=70.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+|+ |++|...++.+...|+ +|+++++++++++...    +.+.+..   .|..+++-    .+++.+.. +
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~----~~Ga~~~---~~~~~~~~----~~~v~~~~~g  234 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK----KVGADYV---INPFEEDV----VKEVMDITDG  234 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH----HHTCSEE---ECTTTSCH----HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH----HhCCCEE---ECCCCcCH----HHHHHHHcCC
Confidence            6899999999 9999999999888999 8999999987765433    3344322   35544332    23333322 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       ++|++|.++|..                          ...+.+++.++++|+++.+++..
T Consensus       235 ~g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  270 (348)
T 2d8a_A          235 NGVDVFLEFSGAP--------------------------KALEQGLQAVTPAGRVSLLGLYP  270 (348)
T ss_dssp             SCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             CCCCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEccCC
Confidence             599999999841                          12455667777889999998754

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.91  E-value=0.0002  Score=61.26  Aligned_cols=105  Identities=20%  Similarity=0.152  Sum_probs=73.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--   87 (255)
                      .|+++||+|+ |++|...+......|+. |+++++++++++...+ +   ...+..+..|-.+.+.+.+   ++.+..  
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l---~~~~~~~~~~~~~~~~~~~---~v~~~t~g  250 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I---CPEVVTHKVERLSAEESAK---KIVESFGG  250 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H---CTTCEEEECCSCCHHHHHH---HHHHHTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h---chhcccccccccchHHHHH---HHHHHhCC
Confidence            5889999998 99999999888888998 9999999887765443 2   2344444555455555443   333333  


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .++|+++.++|..                          ...+..++.++++|+++.++...
T Consensus       251 ~g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  286 (363)
T 3m6i_A          251 IEPAVALECTGVE--------------------------SSIAAAIWAVKFGGKVFVIGVGK  286 (363)
T ss_dssp             CCCSEEEECSCCH--------------------------HHHHHHHHHSCTTCEEEECCCCC
T ss_pred             CCCCEEEECCCCh--------------------------HHHHHHHHHhcCCCEEEEEccCC
Confidence            2699999999841                          12445566778899999987643

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=97.90  E-value=1.4e-05  Score=67.61  Aligned_cols=121  Identities=15%  Similarity=0.150  Sum_probs=80.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--e-----EEEEeCCh--hHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--S-----VVISSRKQ--KNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~-----Vv~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+|+||||+|.||.+++..|+..|.  .     ++++|+++  +.++....++++.. .-...+.  .++  ....   
T Consensus         3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~~---   75 (333)
T 5mdh_A            3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEEI---   75 (333)
T ss_dssp             CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHHH---
T ss_pred             CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcHH---
Confidence            35799999999999999999998875  4     89999975  46677777777642 2121111  111  1111   


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                          .+...|++|+.||....++    .+   ..+.++.|+.....+.+.+.++-.+.-+++++|....
T Consensus        76 ----~~~daDvVvitAg~prkpG----~t---R~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNPvd  133 (333)
T 5mdh_A           76 ----AFKDLDVAILVGSMPRRDG----ME---RKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNPAN  133 (333)
T ss_dssp             ----HTTTCSEEEECCSCCCCTT----CC---TTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHH
T ss_pred             ----HhCCCCEEEEeCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCchH
Confidence                1237999999999643222    22   3345888999988888888877533236888876543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=97.88  E-value=0.00015  Score=61.82  Aligned_cols=103  Identities=17%  Similarity=0.211  Sum_probs=68.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHH-HcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVE-KYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~-~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|++|+++++++++++..    ++.+.+..   .|..+ ++..+++.+.... ...
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---~~~~~~~~~~~~i~~~~~~~~g~  239 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVA----KNCGADVT---LVVDPAKEEESSIIERIRSAIGD  239 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EECCTTTSCHHHHHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH----HHhCCCEE---EcCcccccHHHHHHHHhccccCC
Confidence            5899999997 8999999988888999999999988776543    34465432   24443 2222222221110 013


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ++|++|+++|..           +               ..+..++.++++|+++.++.
T Consensus       240 g~D~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~G~  272 (352)
T 1e3j_A          240 LPNVTIDCSGNE-----------K---------------CITIGINITRTGGTLMLVGM  272 (352)
T ss_dssp             CCSEEEECSCCH-----------H---------------HHHHHHHHSCTTCEEEECSC
T ss_pred             CCCEEEECCCCH-----------H---------------HHHHHHHHHhcCCEEEEEec
Confidence            699999999841           1               23555667788899999875

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=97.88  E-value=0.00012  Score=62.50  Aligned_cols=108  Identities=14%  Similarity=0.140  Sum_probs=68.3

Q ss_pred             CC-CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH--HHHHHHHHHHHH-H
Q 025259           11 QG-KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE--QHRKNLIDKTVE-K   86 (255)
Q Consensus        11 ~~-k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~-~   86 (255)
                      .| +++||+||+|++|...+......|++|+++.++.+.+++..+.+++.|.+..+   |..+.  +.+.+.+.++.. .
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~~~~~~~~~~i~~~t~~~  242 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVI---TEDQNNSREFGPTIKEWIKQS  242 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEE---EHHHHHCGGGHHHHHHHHHHH
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHHhcCCeEEE---ecCccchHHHHHHHHHHhhcc
Confidence            47 99999999999999998887778999998887766543333444455654332   22110  112222222210 1


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .+++|++|.++|...                          +. ..+..++++|+++.++..
T Consensus       243 ~~g~Dvvid~~G~~~--------------------------~~-~~~~~l~~~G~~v~~g~~  277 (364)
T 1gu7_A          243 GGEAKLALNCVGGKS--------------------------ST-GIARKLNNNGLMLTYGGM  277 (364)
T ss_dssp             TCCEEEEEESSCHHH--------------------------HH-HHHHTSCTTCEEEECCCC
T ss_pred             CCCceEEEECCCchh--------------------------HH-HHHHHhccCCEEEEecCC
Confidence            246999999998310                          11 345677888999998754

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=97.86  E-value=5.8e-05  Score=64.09  Aligned_cols=121  Identities=12%  Similarity=0.135  Sum_probs=79.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++++|.|+|++|.+|.+++..++..|.  .|+++|++++.++....++++....    ..++.-.......+       
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~----~~~i~~t~d~~~al-------   74 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGFE----GLNLTFTSDIKEAL-------   74 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCCT----TCCCEEESCHHHHH-------
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcCC----CCceEEcCCHHHHh-------
Confidence            3467899999999999999999999984  6999999998888777777654210    01111001111112       


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCe-EEEEcCcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSS-VVFISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~-iv~vss~~  149 (255)
                      ...|++|.++|...  ++  ..+   -.+.+..|+.-...+.+.+.++- +.+. ++++|...
T Consensus        75 ~dADvVvitaG~p~--kp--G~~---R~dLl~~N~~I~~~i~~~i~~~~-p~a~~vlvvsNPv  129 (343)
T 3fi9_A           75 TDAKYIVSSGGAPR--KE--GMT---REDLLKGNAEIAAQLGKDIKSYC-PDCKHVIIIFNPA  129 (343)
T ss_dssp             TTEEEEEECCC-----------C---HHHHHHHHHHHHHHHHHHHHHHC-TTCCEEEECSSSH
T ss_pred             CCCCEEEEccCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhc-cCcEEEEEecCch
Confidence            26999999999643  21  122   44558888888888888887764 5564 67777554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=97.86  E-value=6.7e-05  Score=60.91  Aligned_cols=81  Identities=14%  Similarity=0.251  Sum_probs=62.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEEE
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ-------------------KNVDKAVEKLKALG--IEVIGI   66 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~~   66 (255)
                      +|++++|+|.|+ ||+|.++++.|++.|. ++.++|++.                   ++.+.+.+.+.+.+  .++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            578899999996 7999999999999997 699999987                   77888888887754  356666


Q ss_pred             EecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           67 ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        67 ~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      ..+++ ++.+.++++       ..|++|.+..
T Consensus       107 ~~~~~-~~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLD-DAELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCC-HHHHHHHHH-------TSSEEEECCS
T ss_pred             eccCC-HhHHHHHHh-------CCCEEEEeCC
Confidence            66665 344443333       6999998865

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.83  E-value=6.1e-05  Score=61.94  Aligned_cols=76  Identities=12%  Similarity=0.107  Sum_probs=57.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++.+++..  ..+....  +.+   +.       . 
T Consensus       116 ~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~--~~~~~~~--~~~---l~-------~-  179 (272)
T 3pwz_A          116 EPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH--SRLRISR--YEA---LE-------G-  179 (272)
T ss_dssp             CCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC--TTEEEEC--SGG---GT-------T-
T ss_pred             CCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc--CCeeEee--HHH---hc-------c-
Confidence            3578999999998 6999999999999996 799999999998888877654  2233322  211   11       0 


Q ss_pred             cCCCcEEEECCCCC
Q 025259           87 YGRIDVFVLNAAVN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                       ...|++||+....
T Consensus       180 -~~~DivInaTp~g  192 (272)
T 3pwz_A          180 -QSFDIVVNATSAS  192 (272)
T ss_dssp             -CCCSEEEECSSGG
T ss_pred             -cCCCEEEECCCCC
Confidence             3789999987653

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.79  E-value=1.3e-05  Score=66.97  Aligned_cols=105  Identities=18%  Similarity=0.160  Sum_probs=61.7

Q ss_pred             cCCCCE-EEEeCCCC-----------------c-hHHHHHHHHHHcCCeEEEEeCChhHHHHH------HHHHH---H--
Q 025259            9 RFQGKV-AVVTASTQ-----------------G-IGLGVAERLGLEGASVVISSRKQKNVDKA------VEKLK---A--   58 (255)
Q Consensus         9 ~l~~k~-vlVtG~~~-----------------g-iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~------~~~~~---~--   58 (255)
                      +++||+ ||||+|..                 | .|.++|+.+++.|+.|+++.+... +...      ...+.   .  
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s-l~p~~r~~~~~~~~~~~~~~~  111 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS-AFPYAHRFPPQTWLSALRPSG  111 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS-CCTTGGGSCHHHHHHHCEECC
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC-cCcchhccCccchhhhhcccc
Confidence            478888 99998775                 5 999999999999999999877532 1100      00011   0  


Q ss_pred             -cCCeEEEEEecCCCHHHHHHHHHHH------------------------------HHHcCCCcEEEECCCCCCCCCCcC
Q 025259           59 -LGIEVIGIICHVSNEQHRKNLIDKT------------------------------VEKYGRIDVFVLNAAVNPYAADLL  107 (255)
Q Consensus        59 -~~~~~~~~~~D~~~~~~~~~~~~~~------------------------------~~~~g~~d~lv~~ag~~~~~~~~~  107 (255)
                       .+.....+..|+...+++.+.+.+.                              .+.++..|++|.+|++..+..|..
T Consensus       112 ~~~~~~~~i~v~v~sa~~m~~av~~~~~~~~~~~l~~i~f~tv~eyl~~L~~~~~~l~~~~~~di~i~aAAVsDf~~p~~  191 (313)
T 1p9o_A          112 PALSGLLSLEAEENALPGFAEALRSYQEAAAAGTFLVVEFTTLADYLHLLQAAAQALNPLGPSAMFYLAAAVSDFYVPVS  191 (313)
T ss_dssp             C-CCSEEEEEEETTTSTTHHHHHHHHHHHHHHTCEEEEEECBHHHHHHHHHHHHHHHGGGGGGEEEEECSBCCSEECC--
T ss_pred             ccccccceeeeccccHHHHHHHHHHHhhhhccccceeeccccHHHHHHHHHHhhHHhhccCCCCEEEECCchhhccCCcc
Confidence             1122345566666655555555433                              133578999999999876333333


Q ss_pred             CCCHHHH
Q 025259          108 KTKESVL  114 (255)
Q Consensus       108 ~~~~~~~  114 (255)
                      ..+...+
T Consensus       192 ~~~~~KI  198 (313)
T 1p9o_A          192 EMPEHKI  198 (313)
T ss_dssp             -------
T ss_pred             ccccccc
Confidence            3333333

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.79  E-value=3.7e-05  Score=59.17  Aligned_cols=78  Identities=12%  Similarity=0.159  Sum_probs=58.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.+++++|.| .|.+|..+++.|.+. |+.|++++++++..+..    .+.+.  .++.+|.++++.+.++     ...
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~----~~~g~--~~~~gd~~~~~~l~~~-----~~~  103 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQH----RSEGR--NVISGDATDPDFWERI-----LDT  103 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH----HHTTC--CEEECCTTCHHHHHTB-----CSC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH----HHCCC--CEEEcCCCCHHHHHhc-----cCC
Confidence            45677899998 599999999999999 99999999998776553    33343  3566899887655432     012


Q ss_pred             CCCcEEEECCC
Q 025259           88 GRIDVFVLNAA   98 (255)
Q Consensus        88 g~~d~lv~~ag   98 (255)
                      .+.|.+|.+.+
T Consensus       104 ~~ad~vi~~~~  114 (183)
T 3c85_A          104 GHVKLVLLAMP  114 (183)
T ss_dssp             CCCCEEEECCS
T ss_pred             CCCCEEEEeCC
Confidence            36899998776

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.79  E-value=5.4e-05  Score=64.92  Aligned_cols=70  Identities=16%  Similarity=0.151  Sum_probs=57.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +|+|.|+ |++|+.+++.|++ .++|.+.+++.+.+++..+       ....+.+|++|.+++.++++       +.|+|
T Consensus        18 kilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~-------~~~~~~~d~~d~~~l~~~~~-------~~DvV   81 (365)
T 3abi_A           18 KVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKE-------FATPLKVDASNFDKLVEVMK-------EFELV   81 (365)
T ss_dssp             EEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTT-------TSEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhc-------cCCcEEEecCCHHHHHHHHh-------CCCEE
Confidence            6999998 9999999999865 5789999999887765432       34567899999998887766       68999


Q ss_pred             EECCCC
Q 025259           94 VLNAAV   99 (255)
Q Consensus        94 v~~ag~   99 (255)
                      |++++.
T Consensus        82 i~~~p~   87 (365)
T 3abi_A           82 IGALPG   87 (365)
T ss_dssp             EECCCG
T ss_pred             EEecCC
Confidence            999875

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=97.77  E-value=0.00011  Score=62.13  Aligned_cols=101  Identities=15%  Similarity=0.209  Sum_probs=71.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+..    ++.|.+..   .|..+++..+.    +.+..+++
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~~~~~----~~~~~g~~  233 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLA----RRLGAEVA---VNARDTDPAAW----LQKEIGGA  233 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHH----HHHHHSSE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HHcCCCEE---EeCCCcCHHHH----HHHhCCCC
Confidence            5889999997 8999999988888999999999998876543    34565443   34444333333    33334689


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |.+|.++|..           +               ..+.+++.++++|+++.++...
T Consensus       234 d~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~G~~~  266 (340)
T 3s2e_A          234 HGVLVTAVSP-----------K---------------AFSQAIGMVRRGGTIALNGLPP  266 (340)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECSCCS
T ss_pred             CEEEEeCCCH-----------H---------------HHHHHHHHhccCCEEEEeCCCC
Confidence            9999998731           1               2345566778889999887543

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.77  E-value=0.00012  Score=61.53  Aligned_cols=116  Identities=18%  Similarity=0.228  Sum_probs=77.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcCC--eEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALGI--EVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|.|+||+|.+|..++..|+..|  ..|+++|+++  .+....++.+...  ++....    ...+.+.+++       .
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~~~~~~~l~~~~----~t~d~~~a~~-------~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSHIETRATVKGYL----GPEQLPDCLK-------G   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTTSSSSCEEEEEE----SGGGHHHHHT-------T
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhccCcCceEEEec----CCCCHHHHhC-------C
Confidence            68999999999999999999888  6799999987  3444445544321  222211    0112222222       7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      .|++|+++|....++    .+.   .+.+..|+.....+.+.+.++- +.+.++++|....
T Consensus        69 aDvVvi~ag~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG----MTR---DDLFNTNATIVATLTAACAQHC-PDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCCC----CcH---HHHHHHHHHHHHHHHHHHHhhC-CCeEEEEECCCcc
Confidence            999999999753222    222   2347888888888888888765 6678888876554

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=97.75  E-value=0.0004  Score=59.16  Aligned_cols=100  Identities=19%  Similarity=0.270  Sum_probs=67.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC--CHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS--NEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~   87 (255)
                      .|+++||+|+ |++|...+......|+ +|+++++++++++..    ++.|.+..   .|..  +.++..   +++.+..
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~---~~i~~~~  239 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLV---LQISKESPQEIA---RKVEGQL  239 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEE---EECSSCCHHHHH---HHHHHHH
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHhCCCEE---EcCcccccchHH---HHHHHHh
Confidence            5889999996 8999999888878899 799999988765543    34465422   2444  223322   2232222


Q ss_pred             -CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           88 -GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                       +++|++|.++|..           +               ..+..+..++++|+++.++.
T Consensus       240 ~~g~D~vid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~G~  274 (356)
T 1pl8_A          240 GCKPEVTIECTGAE-----------A---------------SIQAGIYATRSGGTLVLVGL  274 (356)
T ss_dssp             TSCCSEEEECSCCH-----------H---------------HHHHHHHHSCTTCEEEECSC
T ss_pred             CCCCCEEEECCCCh-----------H---------------HHHHHHHHhcCCCEEEEEec
Confidence             4799999999841           1               13445566788899999875

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.74  E-value=6.1e-05  Score=63.96  Aligned_cols=100  Identities=14%  Similarity=0.191  Sum_probs=68.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|+++||+|+ |++|...+..+...|+ +|+.+++++++++...+ +    .+.   ..|..+++ +.+.+.++.  ..+
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~-l----a~~---v~~~~~~~-~~~~~~~~~--~~g  231 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP-Y----ADR---LVNPLEED-LLEVVRRVT--GSG  231 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT-T----CSE---EECTTTSC-HHHHHHHHH--SSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h----HHh---ccCcCccC-HHHHHHHhc--CCC
Confidence            6899999999 9999999998888999 89999999876544322 1    111   23554432 333333332  236


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|++|.++|..                          ...+..++.++++|+++.++..
T Consensus       232 ~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  264 (343)
T 2dq4_A          232 VEVLLEFSGNE--------------------------AAIHQGLMALIPGGEARILGIP  264 (343)
T ss_dssp             EEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECCCC
T ss_pred             CCEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEEecC
Confidence            99999999840                          1235556677788899998764

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=97.74  E-value=0.00027  Score=60.68  Aligned_cols=103  Identities=17%  Similarity=0.242  Sum_probs=70.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+++++++++++..    ++.|.+..   .|..+ .+.+.+.+.++..  +
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~~~~--~  261 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDF---VNPNDHSEPISQVLSKMTN--G  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEE---ECGGGCSSCHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHhCCceE---EeccccchhHHHHHHHHhC--C
Confidence            5889999995 9999999988888999 799999998877643    34454332   34432 1223333333322  4


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~~  149 (255)
                      ++|++|.++|..                          ...+..++.++++ |++|.++...
T Consensus       262 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  297 (374)
T 1cdo_A          262 GVDFSLECVGNV--------------------------GVMRNALESCLKGWGVSVLVGWTD  297 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCS
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEEcCCC
Confidence            799999999841                          1245566778888 9999987653

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.70  E-value=0.00013  Score=53.60  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=56.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++++|.|+ |.+|..+++.|.+.|+.|++++++++..+...    +.+  +.++.+|.++++.++++      .....|.
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~----~~g--~~~i~gd~~~~~~l~~a------~i~~ad~   74 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR----ERG--VRAVLGNAANEEIMQLA------HLECAKW   74 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH----HTT--CEEEESCTTSHHHHHHT------TGGGCSE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----HcC--CCEEECCCCCHHHHHhc------CcccCCE
Confidence            46777786 88999999999999999999999998776543    334  45678999998876653      1126899


Q ss_pred             EEECCC
Q 025259           93 FVLNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      +|.+.+
T Consensus        75 vi~~~~   80 (140)
T 3fwz_A           75 LILTIP   80 (140)
T ss_dssp             EEECCS
T ss_pred             EEEECC
Confidence            988876

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.69  E-value=0.00019  Score=61.37  Aligned_cols=103  Identities=19%  Similarity=0.184  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+| +|++|...+..+...|++|+++++++++++..    ++.|.+..+   | .+.+.+.+.+.++.. ..++
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~vi---~-~~~~~~~~~v~~~~~-g~g~  258 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRA----FALGADHGI---N-RLEEDWVERVYALTG-DRGA  258 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHHTCSEEE---E-TTTSCHHHHHHHHHT-TCCE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHH----HHcCCCEEE---c-CCcccHHHHHHHHhC-CCCc
Confidence            588999999 89999999988888999999999998776553    334544332   4 332222222232221 1269


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      |+++.++|. .                          ..+..+..++++|+++.++....
T Consensus       259 D~vid~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          259 DHILEIAGG-A--------------------------GLGQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             EEEEEETTS-S--------------------------CHHHHHHHEEEEEEEEEECCCSS
T ss_pred             eEEEECCCh-H--------------------------HHHHHHHHhhcCCEEEEEecCCC
Confidence            999999983 1                          02345566778899999986543

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=97.69  E-value=0.00047  Score=58.03  Aligned_cols=119  Identities=10%  Similarity=0.005  Sum_probs=75.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +.+++++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++++..   ..+.... |  +.          
T Consensus         6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~-~--~~----------   71 (326)
T 3vku_A            6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYS-A--EY----------   71 (326)
T ss_dssp             -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C--CG----------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEE-C--cH----------
Confidence            446789999996 9999999999999887  79999999988887777776532   1222222 1  11          


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       +.+...|++|.++|....++       ++-.+.++.|..-...+.+.+.++- +.+.++++|....
T Consensus        72 -~a~~~aDiVvi~ag~~~kpG-------~tR~dL~~~N~~I~~~i~~~i~~~~-p~a~ilvvtNPvd  129 (326)
T 3vku_A           72 -SDAKDADLVVITAGAPQKPG-------ETRLDLVNKNLKILKSIVDPIVDSG-FNGIFLVAANPVD  129 (326)
T ss_dssp             -GGGTTCSEEEECCCCC-----------------------CHHHHHHHHHTTT-CCSEEEECSSSHH
T ss_pred             -HHhcCCCEEEECCCCCCCCC-------chHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEccCchH
Confidence             12347999999999743221       2344567888877777788777753 5678888876543

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=97.68  E-value=0.0012  Score=55.61  Aligned_cols=116  Identities=14%  Similarity=0.032  Sum_probs=82.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC----CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG----IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++++..    ..+.....|   .           +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~-----------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y-----------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G-----------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H-----------H
Confidence            568999996 9999999999999987  79999999988888777776531    122222222   1           1


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      .+...|++|.++|...  ++  ..+.   .+.+..|..-...+.+.+.++- +.+.++++|....
T Consensus        70 a~~~aDvVvi~ag~p~--kp--G~~R---~dL~~~N~~Iv~~i~~~I~~~~-p~a~vlvvtNPvd  126 (326)
T 3pqe_A           70 DCKDADIVCICAGANQ--KP--GETR---LELVEKNLKIFKGIVSEVMASG-FDGIFLVATNPVD  126 (326)
T ss_dssp             GGTTCSEEEECCSCCC--CT--TCCH---HHHHHHHHHHHHHHHHHHHHTT-CCSEEEECSSSHH
T ss_pred             HhCCCCEEEEecccCC--CC--CccH---HHHHHHHHHHHHHHHHHHHHhc-CCeEEEEcCChHH
Confidence            2237999999999643  22  2233   3458888888888888887763 5678888886554

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=97.67  E-value=0.0012  Score=55.90  Aligned_cols=120  Identities=11%  Similarity=0.113  Sum_probs=80.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCChh--HHHHHHHHHHHcC--CeEEEEEecCCCHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQK--NVDKAVEKLKALG--IEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~~--~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~   78 (255)
                      ++.-+|.|+||+|+||.+++..|+....       .++++|.++.  .++...-+++...  ........  ++..    
T Consensus        22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~~----   95 (345)
T 4h7p_A           22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADPR----   95 (345)
T ss_dssp             CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCHH----
T ss_pred             CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CChH----
Confidence            3455899999999999999999987643       6889998763  4566666776642  12222222  1221    


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                            +.+...|++|..||....++    .+.++   .++.|..=.-.+.+.+.++-.++..|+.+|..
T Consensus        96 ------~a~~~advVvi~aG~prkpG----mtR~D---Ll~~Na~I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           96 ------VAFDGVAIAIMCGAFPRKAG----MERKD---LLEMNARIFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             ------HHTTTCSEEEECCCCCCCTT----CCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             ------HHhCCCCEEEECCCCCCCCC----CCHHH---HHHHhHHHHHHHHHHHHhhccCceEEEEeCCC
Confidence                  12347999999999754322    34544   48888887777777777764455667777754

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=97.66  E-value=0.00049  Score=59.10  Aligned_cols=101  Identities=19%  Similarity=0.228  Sum_probs=69.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+++++++++++..    ++.|.+..   .|..+ .+.+.+.+.++.  .+
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~v~~~~--~~  264 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDC---LNPRELDKPVQDVITELT--AG  264 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHH--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCcEE---EccccccchHHHHHHHHh--CC
Confidence            4889999995 9999999988888899 799999998876543    34454432   24332 122333233332  24


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss  147 (255)
                      ++|++|.++|..                          ...+.++..++++ |+++.++.
T Consensus       265 g~Dvvid~~G~~--------------------------~~~~~~~~~l~~~~G~iv~~G~  298 (376)
T 1e3i_A          265 GVDYSLDCAGTA--------------------------QTLKAAVDCTVLGWGSCTVVGA  298 (376)
T ss_dssp             CBSEEEESSCCH--------------------------HHHHHHHHTBCTTTCEEEECCC
T ss_pred             CccEEEECCCCH--------------------------HHHHHHHHHhhcCCCEEEEECC
Confidence            799999999841                          1245566777888 99998876

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=97.64  E-value=0.00046  Score=59.16  Aligned_cols=103  Identities=18%  Similarity=0.226  Sum_probs=69.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+++++++++++...    +.|.+..   .|..+ .+++.+.+.++.  .+
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~~~~~~~~v~~~~--~~  259 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK----EFGATEC---INPQDFSKPIQEVLIEMT--DG  259 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HHTCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH----HcCCceE---eccccccccHHHHHHHHh--CC
Confidence            5889999995 9999999988888899 7999999988766543    3354332   24332 122333233322  24


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~~  149 (255)
                      ++|++|.++|..                          ...+..+..++++ |+++.++...
T Consensus       260 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~~  295 (373)
T 2fzw_A          260 GVDYSFECIGNV--------------------------KVMRAALEACHKGWGVSVVVGVAA  295 (373)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCCC
T ss_pred             CCCEEEECCCcH--------------------------HHHHHHHHhhccCCcEEEEEecCC
Confidence            799999999841                          1235566778888 9999987543

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=97.62  E-value=3.6e-05  Score=56.89  Aligned_cols=73  Identities=16%  Similarity=0.228  Sum_probs=53.9

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..+++++|.|+ |++|+.+++.|++.|+.|++++|+++..+++.+++   +.+..    +..+.   ..+++       .
T Consensus        19 ~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~---~~~~~----~~~~~---~~~~~-------~   80 (144)
T 3oj0_A           19 NGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY---EYEYV----LINDI---DSLIK-------N   80 (144)
T ss_dssp             HCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH---TCEEE----ECSCH---HHHHH-------T
T ss_pred             ccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh---CCceE----eecCH---HHHhc-------C
Confidence            34899999996 99999999999999999999999998887766554   32221    22332   22222       6


Q ss_pred             CcEEEECCCCC
Q 025259           90 IDVFVLNAAVN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      .|++|++.+..
T Consensus        81 ~Divi~at~~~   91 (144)
T 3oj0_A           81 NDVIITATSSK   91 (144)
T ss_dssp             CSEEEECSCCS
T ss_pred             CCEEEEeCCCC
Confidence            89999998753

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=97.62  E-value=0.00022  Score=61.14  Aligned_cols=97  Identities=18%  Similarity=0.222  Sum_probs=69.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.++||+|+ |++|...+..+...|++|+++++++++++...    +.|.+..   .|..+++.++    ++.   +++
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~----~lGa~~v---i~~~~~~~~~----~~~---~g~  258 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK----ALGADEV---VNSRNADEMA----AHL---KSF  258 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH----HHTCSEE---EETTCHHHHH----TTT---TCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCcEE---eccccHHHHH----Hhh---cCC
Confidence            4889999997 88999999888888999999999988876543    2354332   3555554332    221   479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |++|.++|...                          ..+..++.++++|+++.++..
T Consensus       259 Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~  290 (369)
T 1uuf_A          259 DFILNTVAAPH--------------------------NLDDFTTLLKRDGTMTLVGAP  290 (369)
T ss_dssp             EEEEECCSSCC--------------------------CHHHHHTTEEEEEEEEECCCC
T ss_pred             CEEEECCCCHH--------------------------HHHHHHHHhccCCEEEEeccC
Confidence            99999998521                          123455677788999988764

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=97.60  E-value=8.9e-05  Score=62.48  Aligned_cols=98  Identities=19%  Similarity=0.174  Sum_probs=65.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++||+|++|++|...+..+...|++|+.+++++++++..    ++.|.+..   .|..+.+  ...++++  ..+++|++
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~----~~lGa~~~---i~~~~~~--~~~~~~~--~~~~~d~v  220 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEV---LAREDVM--AERIRPL--DKQRWAAA  220 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEE---EECC-----------C--CSCCEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH----HHcCCcEE---EecCCcH--HHHHHHh--cCCcccEE
Confidence            799999999999999998888999999999998776554    33454432   3444332  1112222  11369999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |.++|. .  .                        .+..+..++++|+++.++...
T Consensus       221 id~~g~-~--~------------------------~~~~~~~l~~~G~~v~~G~~~  249 (328)
T 1xa0_A          221 VDPVGG-R--T------------------------LATVLSRMRYGGAVAVSGLTG  249 (328)
T ss_dssp             EECSTT-T--T------------------------HHHHHHTEEEEEEEEECSCCS
T ss_pred             EECCcH-H--H------------------------HHHHHHhhccCCEEEEEeecC
Confidence            999984 1  0                        244556677889999887643

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=97.58  E-value=0.00059  Score=56.48  Aligned_cols=91  Identities=12%  Similarity=0.191  Sum_probs=68.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      ..+|++++|+|.|+ ||+|.++++.|++.|.. +.++|.+.                  .+.+...+.+++.+  .++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            35788999999986 79999999999999975 88998875                  56677777777654  46777


Q ss_pred             EEecCCCHHHHHHHHHHHHHH-c---CCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEK-Y---GRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~-~---g~~d~lv~~ag   98 (255)
                      +..++++.+.++.+++.+... +   ...|+||.+..
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D  146 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD  146 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence            777888777777766554321 1   36899987665

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=97.58  E-value=0.0003  Score=60.18  Aligned_cols=99  Identities=11%  Similarity=0.146  Sum_probs=67.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+||+|++|...+..+.. .|++|+++++++++.+.+    ++.|.+..   .|..+ +    +.+++.+.. +
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~----~~lGad~v---i~~~~-~----~~~~v~~~~~~  238 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV----KSLGAHHV---IDHSK-P----LAAEVAALGLG  238 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH----HHTTCSEE---ECTTS-C----HHHHHHTTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH----HHcCCCEE---EeCCC-C----HHHHHHHhcCC
Confidence            588999999999999888776655 589999999998776543    34565433   23333 1    223333322 4


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ++|+++.++|..                          ...+.++..++++|+++.+++
T Consensus       239 g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~  271 (363)
T 4dvj_A          239 APAFVFSTTHTD--------------------------KHAAEIADLIAPQGRFCLIDD  271 (363)
T ss_dssp             CEEEEEECSCHH--------------------------HHHHHHHHHSCTTCEEEECSC
T ss_pred             CceEEEECCCch--------------------------hhHHHHHHHhcCCCEEEEECC
Confidence            799999999841                          134455667788899998843

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=97.58  E-value=0.00033  Score=59.36  Aligned_cols=101  Identities=15%  Similarity=0.198  Sum_probs=68.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...  |++|+.+++++++++...    +.|.+..   .|..+.   ...++++.+ ..
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---i~~~~~---~~~~~~~~~-g~  237 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL----ELGADYV---SEMKDA---ESLINKLTD-GL  237 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH----HHTCSEE---ECHHHH---HHHHHHHHT-TC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH----HhCCCEE---eccccc---hHHHHHhhc-CC
Confidence            6899999999 89999999888888  999999999887765443    3354332   232220   122333322 12


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|++|.++|..                          ...+..++.++++|+++.++...
T Consensus       238 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~~  272 (344)
T 2h6e_A          238 GASIAIDLVGTE--------------------------ETTYNLGKLLAQEGAIILVGMEG  272 (344)
T ss_dssp             CEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECCCCS
T ss_pred             CccEEEECCCCh--------------------------HHHHHHHHHhhcCCEEEEeCCCC
Confidence            699999999841                          12355566677889999887643

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=97.58  E-value=0.00062  Score=58.38  Aligned_cols=102  Identities=19%  Similarity=0.198  Sum_probs=69.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++++..    ++.|.+..   .|..+ .+.+.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~~~~~~~--~~  260 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATEC---VNPQDYKKPIQEVLTEMS--NG  260 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHhCCceE---ecccccchhHHHHHHHHh--CC
Confidence            5889999995 9999999998888999 799999998876543    34454332   24332 122333333322  14


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~  148 (255)
                      ++|++|.++|..                          ...+..+..++++ |+++.++..
T Consensus       261 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (374)
T 2jhf_A          261 GVDFSFEVIGRL--------------------------DTMVTALSCCQEAYGVSVIVGVP  295 (374)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHHBCTTTCEEEECSCC
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHhhcCCcEEEEeccC
Confidence            799999999841                          1234556677788 999988754

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=97.57  E-value=0.00055  Score=58.88  Aligned_cols=102  Identities=13%  Similarity=0.209  Sum_probs=69.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC--CHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS--NEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~--~~~~~~~~~~~~~~~~   87 (255)
                      .|+++||+| +|++|...+..+...| ++|+++++++++++.+    ++.|.+..   .|..  +.+++.   +++.+..
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~~~~~---~~v~~~~  263 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLT---LNRRETSVEERR---KAIMDIT  263 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEE---EETTTSCHHHHH---HHHHHHT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH----HHcCCcEE---EeccccCcchHH---HHHHHHh
Confidence            488999999 8999999998888889 5999999998776543    34454432   2333  133333   3333333


Q ss_pred             -C-CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           88 -G-RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        88 -g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       + ++|++|.++|...                          ..+..++.++++|+++.++...
T Consensus       264 ~g~g~Dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  301 (380)
T 1vj0_A          264 HGRGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGVAV  301 (380)
T ss_dssp             TTSCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCS
T ss_pred             CCCCCcEEEECCCCHH--------------------------HHHHHHHHHhcCCEEEEEecCC
Confidence             2 5999999998421                          1344556677889999987653

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.57  E-value=0.00017  Score=57.11  Aligned_cols=73  Identities=15%  Similarity=0.157  Sum_probs=57.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +++|.|+ |.+|+++++.|.+.|+.|++++++++..++..+.   .  ...++.+|.++++.++++      .....|.+
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~--~~~~i~gd~~~~~~l~~a------~i~~ad~v   69 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L--KATIIHGDGSHKEILRDA------EVSKNDVV   69 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S--SSEEEESCTTSHHHHHHH------TCCTTCEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c--CCeEEEcCCCCHHHHHhc------CcccCCEE
Confidence            4889996 8999999999999999999999999877654432   2  245688999998876643      12368999


Q ss_pred             EECCC
Q 025259           94 VLNAA   98 (255)
Q Consensus        94 v~~ag   98 (255)
                      |.+.+
T Consensus        70 i~~~~   74 (218)
T 3l4b_C           70 VILTP   74 (218)
T ss_dssp             EECCS
T ss_pred             EEecC
Confidence            87765

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=97.55  E-value=0.00013  Score=62.07  Aligned_cols=93  Identities=14%  Similarity=0.209  Sum_probs=68.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+.+    ++.|.+..+     ++++.+.+          ++
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v~-----~~~~~~~~----------~~  235 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDA----LSMGVKHFY-----TDPKQCKE----------EL  235 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHH----HHTTCSEEE-----SSGGGCCS----------CE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH----HhcCCCeec-----CCHHHHhc----------CC
Confidence            5899999997 9999999988888999999999998876643    345655443     33332211          79


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.++|...                          ..+..++.++++|+++.++...
T Consensus       236 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  268 (348)
T 3two_A          236 DFIISTIPTHY--------------------------DLKDYLKLLTYNGDLALVGLPP  268 (348)
T ss_dssp             EEEEECCCSCC--------------------------CHHHHHTTEEEEEEEEECCCCC
T ss_pred             CEEEECCCcHH--------------------------HHHHHHHHHhcCCEEEEECCCC
Confidence            99999998531                          1334667778889999987543

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=97.51  E-value=0.0023  Score=53.70  Aligned_cols=117  Identities=15%  Similarity=0.101  Sum_probs=79.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..+|.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++.+.    +.++.+. .|  +.+          
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~~----------   70 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EYS----------   70 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CHH----------
Confidence            3468999998 9999999999998884  6999999988777655555432    1222222 22  211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       .+...|++|..+|....++    .+.   .+.+..|..-...+.+.+.++ .+++.++++|....
T Consensus        71 -a~~~aDvVvi~ag~~~~~g----~~r---~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~  127 (317)
T 3d0o_A           71 -DCHDADLVVICAGAAQKPG----ETR---LDLVSKNLKIFKSIVGEVMAS-KFDGIFLVATNPVD  127 (317)
T ss_dssp             -GGTTCSEEEECCCCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred             -HhCCCCEEEECCCCCCCCC----CcH---HHHHHHHHHHHHHHHHHHHHh-CCCcEEEEecCcHH
Confidence             1237999999999743221    233   345777777777777777776 56778888775543

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=97.51  E-value=0.00084  Score=56.62  Aligned_cols=120  Identities=8%  Similarity=0.086  Sum_probs=84.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +.+.+++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++++..   ........  .|.+         
T Consensus        16 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~---------   83 (331)
T 4aj2_A           16 QVPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS---------   83 (331)
T ss_dssp             -CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG---------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH---------
Confidence            345779999997 9999999999999987  69999999988888888887541   11112211  1211         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                        .+...|++|.++|....++    .+.   .+.++.|..=...+.+.+.++ .+.+.++++|....
T Consensus        84 --~~~~aDiVvi~aG~~~kpG----~tR---~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPvd  140 (331)
T 4aj2_A           84 --VTANSKLVIITAGARQQEG----ESR---LNLVQRNVNIFKFIIPNVVKY-SPQCKLLIVSNPVD  140 (331)
T ss_dssp             --GGTTEEEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred             --HhCCCCEEEEccCCCCCCC----ccH---HHHHHHHHHHHHHHHHHHHHH-CCCeEEEEecChHH
Confidence              1237999999999743222    233   345888887777788888776 56788888886654

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=97.49  E-value=0.00027  Score=60.60  Aligned_cols=102  Identities=21%  Similarity=0.287  Sum_probs=69.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH----
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE----   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~----   85 (255)
                      .|+++||+|+ |++|...+......|+ .|+++++++++.+-.    ++.|.+..   .|.++++..    +.+.+    
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~----~~i~~~~~~  249 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLA----EEVGATAT---VDPSAGDVV----EAIAGPVGL  249 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH----HHHTCSEE---ECTTSSCHH----HHHHSTTSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHcCCCEE---ECCCCcCHH----HHHHhhhhc
Confidence            5899999998 8999999888888999 788899988765432    23454432   355443332    23322    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ..+++|++|.++|..                          ...+..+..++++|+++.++....
T Consensus       250 ~~gg~Dvvid~~G~~--------------------------~~~~~~~~~l~~~G~vv~~G~~~~  288 (370)
T 4ej6_A          250 VPGGVDVVIECAGVA--------------------------ETVKQSTRLAKAGGTVVILGVLPQ  288 (370)
T ss_dssp             STTCEEEEEECSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCCT
T ss_pred             cCCCCCEEEECCCCH--------------------------HHHHHHHHHhccCCEEEEEeccCC
Confidence            124799999998841                          134456667778899999876543

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=97.49  E-value=0.0022  Score=53.91  Aligned_cols=116  Identities=17%  Similarity=0.104  Sum_probs=79.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +.+++.|+|+ |.+|.+++..|+..|. .|+++|++++.++....++++.      ..++.. ..   |.+         
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-t~---d~~---------   71 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTG-AN---DYA---------   71 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-ES---SGG---------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEE-eC---CHH---------
Confidence            4568999998 9999999999999998 8999999998877655555442      223321 11   211         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                        .+...|++|.++|....++       ..-.+.+..|..-...+.+.+.++- +.+.++++|....
T Consensus        72 --a~~~aDiVIiaag~p~k~G-------~~R~dl~~~N~~i~~~i~~~i~~~~-p~a~iivvtNPvd  128 (324)
T 3gvi_A           72 --AIEGADVVIVTAGVPRKPG-------MSRDDLLGINLKVMEQVGAGIKKYA-PEAFVICITNPLD  128 (324)
T ss_dssp             --GGTTCSEEEECCSCCCC------------CHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred             --HHCCCCEEEEccCcCCCCC-------CCHHHHHHhhHHHHHHHHHHHHHHC-CCeEEEecCCCcH
Confidence              1236999999999743222       1233457778877777777777764 6678888886554

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=97.48  E-value=0.001  Score=57.03  Aligned_cols=102  Identities=19%  Similarity=0.184  Sum_probs=68.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+......|+ .|+.+++++++++..    ++.|.+..   .|..+ .+.+.+.+.++.  .+
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~i~~~t--~g  260 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA----IELGATEC---LNPKDYDKPIYEVICEKT--NG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHTTCSEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCcEE---EecccccchHHHHHHHHh--CC
Confidence            4889999995 9999999888878899 699999998876543    34454432   23332 112222223221  24


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~  148 (255)
                      ++|++|.++|..                          ...+..+..++++ |+++.++..
T Consensus       261 g~Dvvid~~g~~--------------------------~~~~~~~~~l~~~~G~iv~~G~~  295 (373)
T 1p0f_A          261 GVDYAVECAGRI--------------------------ETMMNALQSTYCGSGVTVVLGLA  295 (373)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECCCC
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHHhcCCCEEEEEccC
Confidence            799999999841                          1245566778888 999988754

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=97.47  E-value=0.0002  Score=60.20  Aligned_cols=97  Identities=16%  Similarity=0.116  Sum_probs=66.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++ +||+|++|++|...+..+...|++|+++++++++.+.+.    +.|.+..+..-|...       ++++  ..+++|
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~vi~~~~~~~-------~~~~--~~~~~d  213 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK----SLGANRILSRDEFAE-------SRPL--EKQLWA  213 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH----HHTCSEEEEGGGSSC-------CCSS--CCCCEE
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----hcCCCEEEecCCHHH-------HHhh--cCCCcc
Confidence            45 999999999999999988889999999999988765543    345544332222211       1111  124689


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +++.++|.            +               ..+..+..++++|+++.++...
T Consensus       214 ~v~d~~g~------------~---------------~~~~~~~~l~~~G~iv~~G~~~  244 (324)
T 3nx4_A          214 GAIDTVGD------------K---------------VLAKVLAQMNYGGCVAACGLAG  244 (324)
T ss_dssp             EEEESSCH------------H---------------HHHHHHHTEEEEEEEEECCCTT
T ss_pred             EEEECCCc------------H---------------HHHHHHHHHhcCCEEEEEecCC
Confidence            99998872            1               1344567778889999987653

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=97.45  E-value=0.0013  Score=57.12  Aligned_cols=77  Identities=23%  Similarity=0.378  Sum_probs=54.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+|+ |++|...+......|+ .|+++++++++++..    ++.|.+..   .|..+++.    .+++.+.. +
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~----~~~i~~~t~g  280 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRRNLA----KELGADHV---IDPTKENF----VEAVLDYTNG  280 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH----HHHTCSEE---ECTTTSCH----HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH----HHcCCCEE---EcCCCCCH----HHHHHHHhCC
Confidence            5889999998 8999999888888999 799999988776543    33454432   24444332    23333333 2


Q ss_pred             -CCcEEEECCCC
Q 025259           89 -RIDVFVLNAAV   99 (255)
Q Consensus        89 -~~d~lv~~ag~   99 (255)
                       ++|++|.++|.
T Consensus       281 ~g~D~vid~~g~  292 (404)
T 3ip1_A          281 LGAKLFLEATGV  292 (404)
T ss_dssp             CCCSEEEECSSC
T ss_pred             CCCCEEEECCCC
Confidence             59999999985

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=97.45  E-value=0.00026  Score=60.37  Aligned_cols=98  Identities=11%  Similarity=0.157  Sum_probs=66.7

Q ss_pred             CCEEEEeCCCCchHHHH-HHHH-HHcCCe-EEEEeCChh---HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGV-AERL-GLEGAS-VVISSRKQK---NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~-a~~l-~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++++||+|+ |++|... +..+ ...|+. |+.++++++   +++.+    ++.|.+.  +  |..+++ +.+ +.++  
T Consensus       173 ~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~----~~lGa~~--v--~~~~~~-~~~-i~~~--  239 (357)
T 2b5w_A          173 PSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELDATY--V--DSRQTP-VED-VPDV--  239 (357)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH----HHTTCEE--E--ETTTSC-GGG-HHHH--
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH----HHcCCcc--c--CCCccC-HHH-HHHh--
Confidence            399999999 9999998 7666 567998 999999887   65443    3456432  2  554432 222 3333  


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       .+++|++|.++|..           +               ..+..+..++++|+++.++...
T Consensus       240 -~gg~Dvvid~~g~~-----------~---------------~~~~~~~~l~~~G~iv~~g~~~  276 (357)
T 2b5w_A          240 -YEQMDFIYEATGFP-----------K---------------HAIQSVQALAPNGVGALLGVPS  276 (357)
T ss_dssp             -SCCEEEEEECSCCH-----------H---------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             -CCCCCEEEECCCCh-----------H---------------HHHHHHHHHhcCCEEEEEeCCC
Confidence             24799999999841           1               2345566677889999988654

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=97.44  E-value=0.00013  Score=62.40  Aligned_cols=99  Identities=15%  Similarity=0.187  Sum_probs=68.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|...+..+...|++|+++++++++.+...+   +.|.+..   .|..+.+.+.       +..+++
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~lGa~~v---i~~~~~~~~~-------~~~~g~  245 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DLGADDY---VIGSDQAKMS-------ELADSL  245 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TSCCSCE---EETTCHHHHH-------HSTTTE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---HcCCcee---eccccHHHHH-------HhcCCC
Confidence            6899999995 999999998888889999999999877654332   3454322   3444543322       222479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |++|.++|...                          ..+..++.++++|+++.++...
T Consensus       246 D~vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~G~~~  278 (357)
T 2cf5_A          246 DYVIDTVPVHH--------------------------ALEPYLSLLKLDGKLILMGVIN  278 (357)
T ss_dssp             EEEEECCCSCC--------------------------CSHHHHTTEEEEEEEEECSCCS
T ss_pred             CEEEECCCChH--------------------------HHHHHHHHhccCCEEEEeCCCC
Confidence            99999998531                          1233456677889999987643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=97.44  E-value=0.0018  Score=53.78  Aligned_cols=115  Identities=8%  Similarity=-0.032  Sum_probs=77.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++++.    +....+...  +|.+.    +       
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~a----~-------   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL----L-------   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG----G-------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCHHH----h-------
Confidence            5889999 9999999999999987  7999999998876544444331    111121111  12211    2       


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ...|++|..+|....++    .+..   +.+..|..-...+.+.+.++ .+.+.++++|....
T Consensus        68 ~~aDiVViaag~~~kpG----~~R~---dl~~~N~~i~~~i~~~i~~~-~p~a~iivvsNPvd  122 (294)
T 1oju_A           68 KGSEIIVVTAGLARKPG----MTRL---DLAHKNAGIIKDIAKKIVEN-APESKILVVTNPMD  122 (294)
T ss_dssp             TTCSEEEECCCCCCCSS----CCHH---HHHHHHHHHHHHHHHHHHTT-STTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC----CcHH---HHHHHHHHHHHHHHHHHHhh-CCCeEEEEeCCcch
Confidence            26899999999743222    3343   44788877777777777776 56778888886543

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=97.44  E-value=0.00094  Score=57.34  Aligned_cols=102  Identities=20%  Similarity=0.253  Sum_probs=69.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC-HHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN-EQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~~~g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+++++++++++..    ++.|.+..   .|..+ .+.+.+.+.++.  .+
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~~~~~~i~~~~--~g  262 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYETA----KKFGVNEF---VNPKDHDKPIQEVIVDLT--DG  262 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH----HTTTCCEE---ECGGGCSSCHHHHHHHHT--TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH----HHcCCcEE---EccccCchhHHHHHHHhc--CC
Confidence            5889999998 9999999988888899 799999998876533    34565432   23331 122222233222  24


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC-CeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG-SSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~iv~vss~  148 (255)
                      ++|++|.++|..                          ...+..+..++++ |+++.++..
T Consensus       263 g~D~vid~~g~~--------------------------~~~~~~~~~l~~g~G~iv~~G~~  297 (378)
T 3uko_A          263 GVDYSFECIGNV--------------------------SVMRAALECCHKGWGTSVIVGVA  297 (378)
T ss_dssp             CBSEEEECSCCH--------------------------HHHHHHHHTBCTTTCEEEECSCC
T ss_pred             CCCEEEECCCCH--------------------------HHHHHHHHHhhccCCEEEEEccc
Confidence            799999999841                          1345566777775 999998754

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=97.43  E-value=0.0026  Score=53.32  Aligned_cols=116  Identities=19%  Similarity=0.184  Sum_probs=79.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCC--hhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRK--QKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~--~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      +.+++.|+|+ |.+|.+++..|+..|. .|+++|++  ++..+....++.+.      ..++..  .  ++.        
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~--t--~d~--------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG--T--SDY--------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE--E--SCG--------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE--c--CCH--------
Confidence            5688999997 9999999999999999 89999999  55555544444332      122322  1  111        


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                         +.+...|++|.++|....+    ..+.   .+.++.|..-...+.+.+.++ .+.+.++++|....
T Consensus        74 ---~a~~~aDvVIiaag~p~kp----g~~R---~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvvsNPvd  131 (315)
T 3tl2_A           74 ---ADTADSDVVVITAGIARKP----GMSR---DDLVATNSKIMKSITRDIAKH-SPNAIIVVLTNPVD  131 (315)
T ss_dssp             ---GGGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTCEEEECCSSHH
T ss_pred             ---HHhCCCCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCeEEEECCChHH
Confidence               1234799999999974322    2333   445788887777777777776 36678888886543

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=97.42  E-value=0.00043  Score=60.06  Aligned_cols=43  Identities=14%  Similarity=0.100  Sum_probs=38.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      .+.+++++|+|+ |.+|+.+++.+...|++|++++++.+.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~  211 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV  211 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence            467999999996 8999999999999999999999998876654

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=97.42  E-value=0.00051  Score=59.72  Aligned_cols=73  Identities=23%  Similarity=0.316  Sum_probs=54.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.|++++|.|+ |++|+.+++.+...|+ +|++++|+.++.++..+++   +.++    .+.   +++..++       
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~---g~~~----~~~---~~l~~~l-------  225 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA----VRF---DELVDHL-------  225 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE----CCG---GGHHHHH-------
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc---CCce----ecH---HhHHHHh-------
Confidence            478999999998 9999999999999999 7999999988766555444   4331    222   2233222       


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|++|.+.+.
T Consensus       226 ~~aDvVi~at~~  237 (404)
T 1gpj_A          226 ARSDVVVSATAA  237 (404)
T ss_dssp             HTCSEEEECCSS
T ss_pred             cCCCEEEEccCC
Confidence            269999999874

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=97.41  E-value=0.0034  Score=52.68  Aligned_cols=115  Identities=18%  Similarity=0.159  Sum_probs=80.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+++.|+| +|.+|.+++..|+..|. .|+++|++++.++....++++.      ..++..  .  .+.+          
T Consensus         5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~--t--~d~~----------   69 (321)
T 3p7m_A            5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRG--T--NDYK----------   69 (321)
T ss_dssp             CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEE--E--SCGG----------
T ss_pred             CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEE--c--CCHH----------
Confidence            46789999 49999999999999887 8999999998887766666643      222221  1  1211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       .+...|++|..+|....++    .+.   .+.+..|..-...+.+.+.++- +.+.+++++....
T Consensus        70 -a~~~aDvVIi~ag~p~k~G----~~R---~dl~~~N~~i~~~i~~~i~~~~-p~a~vivvtNPvd  126 (321)
T 3p7m_A           70 -DLENSDVVIVTAGVPRKPG----MSR---DDLLGINIKVMQTVGEGIKHNC-PNAFVICITNPLD  126 (321)
T ss_dssp             -GGTTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred             -HHCCCCEEEEcCCcCCCCC----CCH---HHHHHHhHHHHHHHHHHHHHHC-CCcEEEEecCchH
Confidence             1236999999999743222    233   3457778887788888777764 6678888876543

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=97.38  E-value=0.0014  Score=53.62  Aligned_cols=66  Identities=17%  Similarity=0.192  Sum_probs=51.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++.+++. ++   +.  ..  .+..+              ....|
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~---~~--~~--~~~~~--------------l~~~D  174 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RL---GC--DC--FMEPP--------------KSAFD  174 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HH---TC--EE--ESSCC--------------SSCCS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HC---CC--eE--ecHHH--------------hccCC
Confidence            899999997 89999999999999988999999999888776 44   22  11  12221              01689


Q ss_pred             EEEECCCCC
Q 025259           92 VFVLNAAVN  100 (255)
Q Consensus        92 ~lv~~ag~~  100 (255)
                      ++||+....
T Consensus       175 iVInaTp~G  183 (269)
T 3phh_A          175 LIINATSAS  183 (269)
T ss_dssp             EEEECCTTC
T ss_pred             EEEEcccCC
Confidence            999987754

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=97.36  E-value=0.0012  Score=56.47  Aligned_cols=114  Identities=18%  Similarity=0.139  Sum_probs=73.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecC-----------CCHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV-----------SNEQHRK   77 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~-----------~~~~~~~   77 (255)
                      .+.+++++|.|+ |.+|..+++.+...|++|++++|+.+.++...+    .|.++.  ..|+           ..++...
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----lGa~~~--~l~~~~~~~~gya~~~~~~~~~  253 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----VGAQWL--DLGIDAAGEGGYARELSEAERA  253 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----TTCEEC--CCC-------------CHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----cCCeEE--eccccccccccchhhhhHHHHh
Confidence            357899999999 799999999999999999999999987766533    344322  1111           0122222


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .-.+.+.+.....|++|.++.......+. -.+                   +..+..|+++..||.++...
T Consensus       254 ~~~~~l~e~l~~aDIVI~tv~iPg~~ap~-Lvt-------------------~emv~~MkpGsVIVDvA~d~  305 (381)
T 3p2y_A          254 QQQQALEDAITKFDIVITTALVPGRPAPR-LVT-------------------AAAATGMQPGSVVVDLAGET  305 (381)
T ss_dssp             HHHHHHHHHHTTCSEEEECCCCTTSCCCC-CBC-------------------HHHHHTSCTTCEEEETTGGG
T ss_pred             hhHHHHHHHHhcCCEEEECCCCCCcccce-eec-------------------HHHHhcCCCCcEEEEEeCCC
Confidence            33444555556899999987543211111 112                   34556777777788887544

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=97.36  E-value=0.00084  Score=54.42  Aligned_cols=82  Identities=16%  Similarity=0.277  Sum_probs=59.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.|+ ||+|.++++.|+..|.. +.++|++.                   .+.+.+.+.+++.+  .++..
T Consensus        24 ~~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~  102 (251)
T 1zud_1           24 QKLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTA  102 (251)
T ss_dssp             HHHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEE
Confidence            4678999999998 67999999999999985 77886642                   56677777777654  35555


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +..+++ ++.+..+++       ..|++|.+..
T Consensus       103 ~~~~~~-~~~~~~~~~-------~~DvVi~~~d  127 (251)
T 1zud_1          103 LQQRLT-GEALKDAVA-------RADVVLDCTD  127 (251)
T ss_dssp             ECSCCC-HHHHHHHHH-------HCSEEEECCS
T ss_pred             EeccCC-HHHHHHHHh-------cCCEEEECCC
Confidence            555554 344444443       5899998755

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=97.36  E-value=0.0013  Score=56.39  Aligned_cols=101  Identities=11%  Similarity=0.157  Sum_probs=68.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+|+ |++|...+..+...|+ .|+.+++++++++..    ++.|.+..   .|..+++-    .+++.+.. +
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~v---i~~~~~~~----~~~~~~~~~g  257 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELA----KQLGATHV---INSKTQDP----VAAIKEITDG  257 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HHHTCSEE---EETTTSCH----HHHHHHHTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH----HHcCCCEE---ecCCccCH----HHHHHHhcCC
Confidence            4889999995 9999999888877899 599999988776544    23354332   24433322    22333322 3


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ++|++|.++|..                          ...+..+..++++|+++.++...
T Consensus       258 g~D~vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  292 (371)
T 1f8f_A          258 GVNFALESTGSP--------------------------EILKQGVDALGILGKIAVVGAPQ  292 (371)
T ss_dssp             CEEEEEECSCCH--------------------------HHHHHHHHTEEEEEEEEECCCCS
T ss_pred             CCcEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEeCCCC
Confidence            699999999841                          12355667778889999987653

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=97.31  E-value=6.8e-05  Score=61.77  Aligned_cols=43  Identities=12%  Similarity=0.193  Sum_probs=38.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKA   52 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~   52 (255)
                      ++++|+++|+|+ ||.|++++..|++.|+ +|++++|+.++.+++
T Consensus       114 ~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~l  157 (277)
T 3don_A          114 GIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNW  157 (277)
T ss_dssp             TGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTC
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            578999999997 7999999999999999 799999998775543

>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1

Probab=97.28  E-value=0.00085  Score=56.34  Aligned_cols=116  Identities=12%  Similarity=0.044  Sum_probs=75.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCC---eEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGI---EVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+|.|+|+ |.+|..++..|+..|.  .|+++|.+++.++....++.+...   ++.+. .  .+.           +.
T Consensus         7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~--~~~-----------~a   71 (318)
T 1y6j_A            7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLY-A--GDY-----------SD   71 (318)
T ss_dssp             CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEE-E--CCH-----------HH
Confidence            457999998 9999999999999987  799999998777765566644311   22111 1  111           12


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      +...|++|.++|...  .+  ..+   ..+.+..|+.-...+.+.+.++ .+++.|+++|...+
T Consensus        72 ~~~aDvVii~~g~p~--k~--g~~---r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~tNPv~  127 (318)
T 1y6j_A           72 VKDCDVIVVTAGANR--KP--GET---RLDLAKKNVMIAKEVTQNIMKY-YNHGVILVVSNPVD  127 (318)
T ss_dssp             GTTCSEEEECCCC----------C---HHHHHHHHHHHHHHHHHHHHHH-CCSCEEEECSSSHH
T ss_pred             hCCCCEEEEcCCCCC--CC--CcC---HHHHHHhhHHHHHHHHHHHHHh-CCCcEEEEecCcHH
Confidence            347999999999643  11  122   3345788888888888888876 46777777765443

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=97.27  E-value=0.0079  Score=50.26  Aligned_cols=116  Identities=16%  Similarity=0.116  Sum_probs=77.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEe-cCCCHHHHHHHHHHHHHHcCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-G--ASVVISSRKQKNVDKAVEKLKALGIEVIGIIC-HVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~-D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|.|+||+|.+|.+++..|+.. +  ..++++|+++ ..+....++++......+... .-.+.+.    +       ..
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~----~-------~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----L-------EG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH----H-------TT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH----h-------CC
Confidence            6899999999999999999875 5  4699999987 455555666654332222211 1112111    2       27


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .|++|..+|....+    ..+.   .+.++.|..-...+.+.+.++ .+.+.++++|...
T Consensus        70 aDivii~ag~~rkp----G~~R---~dll~~N~~I~~~i~~~i~~~-~p~a~vlvvtNPv  121 (312)
T 3hhp_A           70 ADVVLISAGVARKP----GMDR---SDLFNVNAGIVKNLVQQVAKT-CPKACIGIITNPV  121 (312)
T ss_dssp             CSEEEECCSCSCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTSEEEECSSCH
T ss_pred             CCEEEEeCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHH-CCCcEEEEecCcc
Confidence            99999999974322    2333   455888888888888888776 3567788887543

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=97.25  E-value=0.0012  Score=56.28  Aligned_cols=77  Identities=16%  Similarity=0.223  Sum_probs=54.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   88 (255)
                      .|+++||+|+ |++|...+...... |++|+.+++++++++..    ++.|.+..   .|..++  +.+.+.++.  .+ 
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~--~~~~v~~~~--~g~  253 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLA----ERLGADHV---VDARRD--PVKQVMELT--RGR  253 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH----HHTTCSEE---EETTSC--HHHHHHHHT--TTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH----HHhCCCEE---Eeccch--HHHHHHHHh--CCC
Confidence            5899999999 89999999888788 99999999988776543    34454432   344443  332233321  13 


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      ++|++|.++|.
T Consensus       254 g~Dvvid~~G~  264 (359)
T 1h2b_A          254 GVNVAMDFVGS  264 (359)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCcEEEECCCC
Confidence            69999999984

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=97.23  E-value=0.0016  Score=55.07  Aligned_cols=100  Identities=16%  Similarity=0.136  Sum_probs=67.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|++++|+|+ |++|...+...... |++|+.+++++++++..    ++.|.+..+   |..+ +.    .+++.+.. +
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~----~~lGa~~~i---~~~~-~~----~~~v~~~t~g  237 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALA----REVGADAAV---KSGA-GA----ADAIRELTGG  237 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH----HHTTCSEEE---ECST-TH----HHHHHHHHGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCCEEE---cCCC-cH----HHHHHHHhCC
Confidence            5889999998 99999988777666 78899999998876543    345654432   2222 22    23333322 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       ++|+++.++|..                          ...+..+..++++|+++.++...
T Consensus       238 ~g~d~v~d~~G~~--------------------------~~~~~~~~~l~~~G~iv~~G~~~  273 (345)
T 3jv7_A          238 QGATAVFDFVGAQ--------------------------STIDTAQQVVAVDGHISVVGIHA  273 (345)
T ss_dssp             GCEEEEEESSCCH--------------------------HHHHHHHHHEEEEEEEEECSCCT
T ss_pred             CCCeEEEECCCCH--------------------------HHHHHHHHHHhcCCEEEEECCCC
Confidence             799999999841                          13455566777889999887544

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=97.22  E-value=0.0015  Score=55.96  Aligned_cols=101  Identities=11%  Similarity=0.043  Sum_probs=67.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      -.|+++||+|++|++|...+......|++|+.+. ++++++    .+++.|.+..   .|..+++-    .+.+.+.. +
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~----~~~~lGa~~v---i~~~~~~~----~~~v~~~t~g  230 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFD----LAKSRGAEEV---FDYRAPNL----AQTIRTYTKN  230 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH----HHHHTTCSEE---EETTSTTH----HHHHHHHTTT
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHH----HHHHcCCcEE---EECCCchH----HHHHHHHccC
Confidence            4689999999999999999998888999988876 555543    3344565433   34444432    23333322 4


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-cCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~iv~vss~  148 (255)
                      ++|+++.++|..           +               ..+..+..+ +++|+++.++..
T Consensus       231 ~~d~v~d~~g~~-----------~---------------~~~~~~~~l~~~~G~iv~~g~~  265 (371)
T 3gqv_A          231 NLRYALDCITNV-----------E---------------STTFCFAAIGRAGGHYVSLNPF  265 (371)
T ss_dssp             CCCEEEESSCSH-----------H---------------HHHHHHHHSCTTCEEEEESSCC
T ss_pred             CccEEEECCCch-----------H---------------HHHHHHHHhhcCCCEEEEEecC
Confidence            699999999941           1               133344555 467899988743

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=97.19  E-value=0.0014  Score=55.74  Aligned_cols=101  Identities=17%  Similarity=0.225  Sum_probs=68.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+|+ |++|...+......|+ .|+++++++++++..    ++.|.+..   .|..+++.    .+++.+.. +
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~----~~lGa~~v---i~~~~~~~----~~~v~~~t~g  233 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA----LEYGATDI---INYKNGDI----VEQILKATDG  233 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH----HHHTCCEE---ECGGGSCH----HHHHHHHTTT
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH----HHhCCceE---EcCCCcCH----HHHHHHHcCC
Confidence            5889999985 9999998888878899 699999988765433    33454432   23333322    33333333 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       ++|+++.++|...                          ..+..++.++++|+++.++...
T Consensus       234 ~g~D~v~d~~g~~~--------------------------~~~~~~~~l~~~G~~v~~G~~~  269 (352)
T 3fpc_A          234 KGVDKVVIAGGDVH--------------------------TFAQAVKMIKPGSDIGNVNYLG  269 (352)
T ss_dssp             CCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCCCC
T ss_pred             CCCCEEEECCCChH--------------------------HHHHHHHHHhcCCEEEEecccC
Confidence             5999999998521                          2344566777889999887543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=97.19  E-value=0.00094  Score=57.70  Aligned_cols=114  Identities=18%  Similarity=0.198  Sum_probs=70.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEE--------------EecCCCHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI--------------ICHVSNEQ   74 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--------------~~D~~~~~   74 (255)
                      .+.+.+++|.|+ |.+|..+++.+...|++|++++++.+.++...+    .+.++..+              .-.++++.
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~  261 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----LGAKFIAVEDEEFKAAETAGGYAKEMSGEY  261 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----TTCEECCCCC-----------------CHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----cCCceeecccccccccccccchhhhcchhh
Confidence            467899999999 799999999999999999999999987655433    34332111              11122221


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ...-.+.+.+.....|++|+++.......+.                    .+.+..+..|+++..||.++..
T Consensus       262 -~~~~~~~l~e~l~~aDVVI~tvlipg~~ap~--------------------Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          262 -QVKQAALVAEHIAKQDIVITTALIPGRPAPR--------------------LVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             -HHHHHHHHHHHHHTCSEEEECCCCSSSCCCC--------------------CBCHHHHTTSCTTCEEEETTGG
T ss_pred             -hhhhHhHHHHHhcCCCEEEECCcCCCCCCCE--------------------EecHHHHhcCCCCCEEEEEeCC
Confidence             1111122223334799999998653211111                    1123456678877778888753

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=97.18  E-value=0.0012  Score=56.78  Aligned_cols=81  Identities=19%  Similarity=0.245  Sum_probs=56.3

Q ss_pred             CCCCEEEEeC-CCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTA-STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG-~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..|.++||.| |+|++|...+..+...|++|+.+++++++.+.+.    +.|.+..   .|..+++-.+++.+....  .
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~----~lGa~~~---~~~~~~~~~~~v~~~t~~--~  239 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK----AQGAVHV---CNAASPTFMQDLTEALVS--T  239 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH----HTTCSCE---EETTSTTHHHHHHHHHHH--H
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCcEE---EeCCChHHHHHHHHHhcC--C
Confidence            3588999997 9999999999888888999999999887765443    3454432   344443333333222221  2


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      ++|+++.++|.
T Consensus       240 g~d~v~d~~g~  250 (379)
T 3iup_A          240 GATIAFDATGG  250 (379)
T ss_dssp             CCCEEEESCEE
T ss_pred             CceEEEECCCc
Confidence            69999999995

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=97.17  E-value=0.0034  Score=52.80  Aligned_cols=116  Identities=10%  Similarity=0.090  Sum_probs=80.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC-----CeEEEEEecCCCHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG-----IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..+++.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++++..     .++. ...|..+           
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~-~t~d~~~-----------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIV-SGKDYSV-----------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEE-EESSSCS-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEE-EcCCHHH-----------
Confidence            4578999999 9999999999999987  79999999988887777776531     1221 1223221           


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                         +...|++|.++|....++    .+.   .+.+..|..-...+.+.+.++ .+.+.++++|....
T Consensus        87 ---~~daDiVIitaG~p~kpG----~tR---~dll~~N~~I~k~i~~~I~k~-~P~a~ilvvtNPvd  142 (330)
T 3ldh_A           87 ---SAGSKLVVITAGARQQEG----ESR---LNLVQRNVNIFKFIIPNIVKH-SPDCLKELHPELGT  142 (330)
T ss_dssp             ---CSSCSEEEECCSCCCCSS----CCT---TGGGHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred             ---hCCCCEEEEeCCCCCCCC----CCH---HHHHHhhHHHHHHHHHHHHhh-CCCceEEeCCCccH
Confidence               237999999999754222    222   234667776666677777766 56778888886543

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=97.17  E-value=0.0042  Score=52.39  Aligned_cols=121  Identities=12%  Similarity=0.072  Sum_probs=76.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+..+|.|+|+ |.+|.+++..|+..|. +|++++++++.++.....+...      ..++.. .   +|.+   ..+ 
T Consensus         6 ~~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~---ea~-   76 (331)
T 1pzg_A            6 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRA-E---YSYE---AAL-   76 (331)
T ss_dssp             CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEE-E---CSHH---HHH-
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEE-e---CCHH---HHh-
Confidence            334568999998 9999999999999998 8999999998887744444331      122221 1   2322   112 


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCC---CHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKT---KESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~---~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                            ...|++|..+|....++  .+.   +.   .+.+..|..-...+.+.+.++. +.+.++++|...+
T Consensus        77 ------~~aDiVi~a~g~p~~~g--~~~~~~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNP~~  136 (331)
T 1pzg_A           77 ------TGADCVIVTAGLTKVPG--KPDSEWSR---NDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNPLD  136 (331)
T ss_dssp             ------TTCSEEEECCSCSSCTT--CCGGGCCG---GGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred             ------CCCCEEEEccCCCCCCC--cccCCCCH---HHHHHHHHHHHHHHHHHHHHHC-CCcEEEEEcCchH
Confidence                  26899999998643221  100   12   2335566666666666666654 5666766665543

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=97.17  E-value=0.00056  Score=54.63  Aligned_cols=72  Identities=6%  Similarity=-0.034  Sum_probs=55.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |++++++++..+...     .  .+.++.+|.++++.++++      .....|
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-----~--~~~~i~gd~~~~~~l~~a------~i~~ad   73 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR-----S--GANFVHGDPTRVSDLEKA------NVRGAR   73 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-----T--TCEEEESCTTCHHHHHHT------TCTTCS
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-----c--CCeEEEcCCCCHHHHHhc------Ccchhc
Confidence            567899997 8999999999999999 999999988765443     2  356788999998776543      123688


Q ss_pred             EEEECCC
Q 025259           92 VFVLNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      .+|.+.+
T Consensus        74 ~vi~~~~   80 (234)
T 2aef_A           74 AVIVDLE   80 (234)
T ss_dssp             EEEECCS
T ss_pred             EEEEcCC
Confidence            8887654

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=97.14  E-value=0.011  Score=49.48  Aligned_cols=115  Identities=14%  Similarity=0.118  Sum_probs=77.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.|+|+ |.+|.+++..|+..|.  .|+++|++++.++....++++.    +.+..+...|  +.           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~--~~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTN--DY-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEES--SS-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECC--CH-----------HHh
Confidence            5789996 9999999999999886  7999999998877666666542    1122222122  11           123


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ...|++|.++|....++       .+-.+.++.|..-...+.+.+.++ .+.+.++++|....
T Consensus        68 ~~aDvVii~ag~~~kpG-------~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivvtNPvd  122 (314)
T 3nep_X           68 EDSDVCIITAGLPRSPG-------MSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVVANPLD  122 (314)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEECCSSHH
T ss_pred             CCCCEEEECCCCCCCCC-------CCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEecCCchh
Confidence            37999999999743221       223456788887777777777776 46678888886543

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=97.12  E-value=0.0077  Score=50.47  Aligned_cols=115  Identities=10%  Similarity=0.047  Sum_probs=77.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|.|+|+ |.+|.+++..|+..+.  .|+++|++++.++....++.+..   .++.+. .|  +.+           .+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~~~-----------a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--EYS-----------DC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--CHH-----------Hh
Confidence            68999998 9999999999998875  69999999988887777776541   222222 22  211           13


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ...|++|..+|....++       .+-.+.+..|..-...+.+.+.++ .+.+.++++|....
T Consensus        71 ~~aDvVii~ag~~~~~g-------~~R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~  125 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-------ESRLDLVNKNLNILSSIVKPVVDS-GFDGIFLVAANPVD  125 (318)
T ss_dssp             TTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHT-TCCSEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEeCCcHH
Confidence            37999999999743221       123345677777777777777776 46788888876554

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=97.11  E-value=0.00076  Score=57.46  Aligned_cols=106  Identities=16%  Similarity=0.260  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|...+......|+.|+.+.+..+..++..+.+++.|.+..+   |..+ ...+. +.++....+++
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi---~~~~-~~~~~-~~~~~~~~~~~  241 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVI---TEEE-LRRPE-MKNFFKDMPQP  241 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHHHTTCSEEE---EHHH-HHSGG-GGGTTSSSCCC
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHHhcCCcEEE---ecCc-chHHH-HHHHHhCCCCc
Confidence            5899999999999999998877778999887766544333333444556654332   2111 10011 11111111258


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |++|.++|...                          + ...+..++++|+++.++..
T Consensus       242 Dvvid~~g~~~--------------------------~-~~~~~~l~~~G~iv~~G~~  272 (357)
T 1zsy_A          242 RLALNCVGGKS--------------------------S-TELLRQLARGGTMVTYGGM  272 (357)
T ss_dssp             SEEEESSCHHH--------------------------H-HHHHTTSCTTCEEEECCCC
T ss_pred             eEEEECCCcHH--------------------------H-HHHHHhhCCCCEEEEEecC
Confidence            99999988310                          1 2245677888999998653

>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}

Probab=97.10  E-value=0.012  Score=49.43  Aligned_cols=118  Identities=17%  Similarity=0.149  Sum_probs=73.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      +...++|.|+|+ |.+|.+++..|+..|. +|++.|++++.++.....+...      ..++...    +|.+       
T Consensus        11 ~~~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~-------   78 (328)
T 2hjr_A           11 VIMRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGE----NNYE-------   78 (328)
T ss_dssp             --CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE----SCGG-------
T ss_pred             cCCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEEC----CCHH-------
Confidence            334468999998 9999999999999998 8999999998887644444321      2223221    2211       


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                          .+...|++|.++|....++  .  +..   +.+..|..-...+.+.+.++. +.+.++++|...+
T Consensus        79 ----al~~aD~VI~avg~p~k~g--~--tr~---dl~~~n~~i~~~i~~~i~~~~-p~a~viv~tNP~~  135 (328)
T 2hjr_A           79 ----YLQNSDVVIITAGVPRKPN--M--TRS---DLLTVNAKIVGSVAENVGKYC-PNAFVICITNPLD  135 (328)
T ss_dssp             ----GGTTCSEEEECCSCCCCTT--C--CSG---GGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred             ----HHCCCCEEEEcCCCCCCCC--C--chh---hHHhhhHHHHHHHHHHHHHHC-CCeEEEEecCchH
Confidence                1236899999998643222  1  111   234555555555566665553 5566676665443

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=97.05  E-value=0.011  Score=49.68  Aligned_cols=117  Identities=10%  Similarity=0.024  Sum_probs=79.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +..+|.|+|+ |.+|.+++..|+..+.  .|+++|++++.++....++.+..   .++.+. .|  +.++          
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~~a----------   73 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EYSD----------   73 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CHHH----------
Confidence            4568999998 9999999999998875  69999999988887777776531   222222 22  2111          


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       +...|++|..+|....++    .+   -.+.+..|+.-...+.+.+.++ .+.+.|+++|....
T Consensus        74 -~~~aDvVii~ag~~~k~g----~~---R~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~  129 (326)
T 2zqz_A           74 -AKDADLVVITAGAPQKPG----ET---RLDLVNKNLKILKSIVDPIVDS-GFNGIFLVAANPVD  129 (326)
T ss_dssp             -GGGCSEEEECCCCC---------C---HHHHHHHHHHHHHHHHHHHHHH-TCCSEEEECSSSHH
T ss_pred             -hCCCCEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEeCCcHH
Confidence             236999999999743221    22   3345777777777777777766 46788888876554

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=97.04  E-value=0.0012  Score=56.35  Aligned_cols=100  Identities=21%  Similarity=0.199  Sum_probs=67.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCH-HHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNE-QHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~~~~~g~   89 (255)
                      .|+++||+|+ |++|...+..+...|++|+.+++++++++...    +.|.+..   .|..++ +.    .+++.   ++
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~----~lGa~~v---~~~~~~~~~----~~~~~---~~  243 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM----KMGADHY---IATLEEGDW----GEKYF---DT  243 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH----HHTCSEE---EEGGGTSCH----HHHSC---SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH----HcCCCEE---EcCcCchHH----HHHhh---cC
Confidence            5899999999 99999999888888999999999988765543    2354432   233332 22    22221   57


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +|++|.++|... .                       ...+..++.++++|+++.++...
T Consensus       244 ~D~vid~~g~~~-~-----------------------~~~~~~~~~l~~~G~iv~~g~~~  279 (360)
T 1piw_A          244 FDLIVVCASSLT-D-----------------------IDFNIMPKAMKVGGRIVSISIPE  279 (360)
T ss_dssp             EEEEEECCSCST-T-----------------------CCTTTGGGGEEEEEEEEECCCCC
T ss_pred             CCEEEECCCCCc-H-----------------------HHHHHHHHHhcCCCEEEEecCCC
Confidence            999999998520 0                       01233456677788999887654

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=97.04  E-value=0.0029  Score=53.40  Aligned_cols=90  Identities=14%  Similarity=0.161  Sum_probs=58.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcCC--eEEEE
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALGI--EVIGI   66 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~   66 (255)
                      +|++++|+|.|+ ||+|.++++.|+..|.. +.++|++.                   .+.+.+.+.+++.++  ++..+
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP~v~v~~~  109 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  109 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHhCCCCEEEEE
Confidence            578999999987 79999999999999986 88887743                   456667777777654  44444


Q ss_pred             EecC-------CCHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           67 ICHV-------SNEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        67 ~~D~-------~~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ..++       ++++....-.+.+.+.+...|+||.+..-
T Consensus       110 ~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~tDn  149 (340)
T 3rui_A          110 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  149 (340)
T ss_dssp             CCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCcccchhhhhcCCHHHHHhhhccCCEEEecCCC
Confidence            4433       22111111112222222368999988764

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=97.04  E-value=0.0015  Score=57.59  Aligned_cols=82  Identities=21%  Similarity=0.238  Sum_probs=56.5

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ++++++++|+++|.|. |+.|.++|+.|++.|+.|.+.|++........+.+++.|.++..  ...  ++.   +++   
T Consensus         2 ~~~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~--g~~--~~~---~~~---   70 (451)
T 3lk7_A            2 KTITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKPFDENPTAQSLLEEGIKVVC--GSH--PLE---LLD---   70 (451)
T ss_dssp             --CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSCGGGCHHHHHHHHTTCEEEE--SCC--CGG---GGG---
T ss_pred             cchhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCcccCChHHHHHHhCCCEEEE--CCC--hHH---hhc---
Confidence            3446788999999999 78999999999999999999999764323344566666765432  111  111   111   


Q ss_pred             HHcCCCcEEEECCCCC
Q 025259           85 EKYGRIDVFVLNAAVN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                         +..|.+|.+.|+.
T Consensus        71 ---~~~d~vv~spgi~   83 (451)
T 3lk7_A           71 ---EDFCYMIKNPGIP   83 (451)
T ss_dssp             ---SCEEEEEECTTSC
T ss_pred             ---CCCCEEEECCcCC
Confidence               1389999999974

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=97.03  E-value=0.0098  Score=49.60  Aligned_cols=113  Identities=15%  Similarity=0.176  Sum_probs=72.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|++++.++....++.+.      ..++...    +|.++          
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t----~d~~a----------   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT----NNYAD----------   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE----SCGGG----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC----CCHHH----------
Confidence            57999998 9999999999999996 8999999998887666666542      2223221    22111          


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       +...|++|.++|....++    .+   -.+.+..|..-...+.+.+.++- +.+.++++|...
T Consensus        68 -~~~aD~Vi~a~g~p~~~g----~~---r~dl~~~n~~i~~~i~~~i~~~~-p~a~vi~~tNPv  122 (309)
T 1ur5_A           68 -TANSDVIVVTSGAPRKPG----MS---REDLIKVNADITRACISQAAPLS-PNAVIIMVNNPL  122 (309)
T ss_dssp             -GTTCSEEEECCCC---------------CHHHHHHHHHHHHHHHHHGGGC-TTCEEEECCSSH
T ss_pred             -HCCCCEEEEcCCCCCCCC----CC---HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEcCCch
Confidence             236999999999743221    11   22346666666666777776663 556666665544

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.03  E-value=0.012  Score=48.32  Aligned_cols=42  Identities=17%  Similarity=0.198  Sum_probs=36.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK   55 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~   55 (255)
                      ++|.|.|+ |.+|..++..|++.|++|++++++++.+++..+.
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~   46 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKR   46 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHH
Confidence            67888875 7899999999999999999999999888776655

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=97.02  E-value=0.0067  Score=50.49  Aligned_cols=113  Identities=16%  Similarity=0.122  Sum_probs=70.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++....   ....+. .  .+.+           .+.
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~-~--~~~~-----------a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVW-H--GGHS-----------ELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEE-E--ECGG-----------GGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEE-E--CCHH-----------HhC
Confidence            6889998 9999999999999998  89999999887765555543321   111111 1  1211           123


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|++|.++|....++       ....+.+..|+.-...+.+.+.++ .+.+.++++|...
T Consensus        67 ~aDvVIi~~~~~~~~g-------~~r~dl~~~n~~i~~~i~~~i~~~-~p~~~vi~~tNP~  119 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG-------ESRLDLLEKNADIFRELVPQITRA-APDAVLLVTSNPV  119 (304)
T ss_dssp             TCSEEEECC-------------------CHHHHHHHHHHHHHHHHHH-CSSSEEEECSSSH
T ss_pred             CCCEEEEcCCCCCCCC-------CcHHHHHHhHHHHHHHHHHHHHHh-CCCeEEEEecCch
Confidence            7899999998643221       123345677777777777777776 4666777766544

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.01  E-value=0.0024  Score=53.02  Aligned_cols=96  Identities=17%  Similarity=0.238  Sum_probs=65.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++++++|.|+ |.+|+++++.+...|++|++++|+.+..+...    +.+.+.  +  +.   ++++++       +
T Consensus       153 ~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~----~~g~~~--~--~~---~~l~~~-------l  213 (300)
T 2rir_A          153 YTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT----EMGLVP--F--HT---DELKEH-------V  213 (300)
T ss_dssp             SCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTCEE--E--EG---GGHHHH-------S
T ss_pred             CCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----HCCCeE--E--ch---hhHHHH-------h
Confidence            4789999999996 89999999999999999999999986654332    234332  1  11   222222       2


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ...|+++++.....       .+                   +..+..|+++..+|+++..
T Consensus       214 ~~aDvVi~~~p~~~-------i~-------------------~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          214 KDIDICINTIPSMI-------LN-------------------QTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             TTCSEEEECCSSCC-------BC-------------------HHHHTTSCTTCEEEECSST
T ss_pred             hCCCEEEECCChhh-------hC-------------------HHHHHhCCCCCEEEEEeCC
Confidence            47999999987411       01                   1234567777788888753

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=97.00  E-value=0.00065  Score=55.99  Aligned_cols=45  Identities=18%  Similarity=0.231  Sum_probs=39.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVE   54 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~   54 (255)
                      ++++|+++|.|+ ||.|++++..|++.|+ +|.++.|+.++.+++.+
T Consensus       119 ~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~  164 (282)
T 3fbt_A          119 EIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYG  164 (282)
T ss_dssp             CCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCT
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHH
Confidence            578999999997 6999999999999998 79999999988766554

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=96.95  E-value=0.0016  Score=51.06  Aligned_cols=43  Identities=23%  Similarity=0.424  Sum_probs=37.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      +++|+||+|.+|.++++.|++.|++|++++|+++..++..+.+
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~   44 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh
Confidence            5889999999999999999999999999999988777655443

>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*

Probab=96.94  E-value=0.017  Score=49.35  Aligned_cols=120  Identities=11%  Similarity=0.019  Sum_probs=77.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-----eEEEEeCC----hhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-----SVVISSRK----QKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-----~Vv~~~r~----~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+|.|+||+|.||.+++..++..+.     .+++.+.+    .+.++...-+++.... -...+.  +.+. .      
T Consensus        32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~p~~~~v~--i~~~-~------  102 (375)
T 7mdh_A           32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVS--IGID-P------  102 (375)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEE--EESC-H------
T ss_pred             CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhhhhcCCcE--EecC-C------
Confidence            56899999999999999999998764     16665543    4446666677765431 111111  1211 0      


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        .+.+...|++|..||....++    .+.   .+.++.|..=.-.+.+.+.++..+.+.++.+|...
T Consensus       103 --y~~~~daDvVVitag~prkpG----~tR---~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPv  161 (375)
T 7mdh_A          103 --YEVFEDVDWALLIGAKPRGPG----MER---AALLDINGQIFADQGKALNAVASKNVKVLVVGNPC  161 (375)
T ss_dssp             --HHHTTTCSEEEECCCCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSH
T ss_pred             --HHHhCCCCEEEEcCCCCCCCC----CCH---HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCch
Confidence              122347999999999743222    333   45588888777777777777645667888887654

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.91  E-value=0.0068  Score=51.12  Aligned_cols=104  Identities=13%  Similarity=0.085  Sum_probs=66.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ..|++++|+|+ |++|...+..+...|+. ++.+++++++++.    +++.|.+..+   |..+.+. .+..+.+. ...
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~----a~~lGa~~~i---~~~~~~~-~~~~~~~~-~~~  228 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLAL----AKSFGAMQTF---NSSEMSA-PQMQSVLR-ELR  228 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHH----HHHTTCSEEE---ETTTSCH-HHHHHHHG-GGC
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHH----HHHcCCeEEE---eCCCCCH-HHHHHhhc-ccC
Confidence            46899999987 89999998888888987 4678888876543    3455655443   3333222 22223222 234


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..|+++.++|..           +               ..+..+..++++++++.++...
T Consensus       229 g~d~v~d~~G~~-----------~---------------~~~~~~~~l~~~G~~v~~g~~~  263 (346)
T 4a2c_A          229 FNQLILETAGVP-----------Q---------------TVELAVEIAGPHAQLALVGTLH  263 (346)
T ss_dssp             SSEEEEECSCSH-----------H---------------HHHHHHHHCCTTCEEEECCCCS
T ss_pred             Cccccccccccc-----------c---------------hhhhhhheecCCeEEEEEeccC
Confidence            689999998841           1               1233455667888999887543

>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1

Probab=96.90  E-value=0.0056  Score=51.30  Aligned_cols=112  Identities=13%  Similarity=0.127  Sum_probs=74.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc-----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL-----GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++.|.|+ |.+|.+++..|+..|.  .|++++++++.++....++...     ..++.   .  ++.+.    +      
T Consensus         2 kI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~---~--~d~~~----~------   65 (319)
T 1a5z_A            2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIY---A--GDYAD----L------   65 (319)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEE---E--CCGGG----G------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEE---e--CCHHH----h------
Confidence            6889998 9999999999999998  8999999988887765555432     11221   1  23211    1      


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       ...|++|.+++....+    ..+..   +.+..|..-...+.+.+.++. +.+.+++++...+
T Consensus        66 -~~aDvViiav~~~~~~----g~~r~---dl~~~n~~i~~~i~~~i~~~~-~~~~ii~~tNp~~  120 (319)
T 1a5z_A           66 -KGSDVVIVAAGVPQKP----GETRL---QLLGRNARVMKEIARNVSKYA-PDSIVIVVTNPVD  120 (319)
T ss_dssp             -TTCSEEEECCCCCCCS----SCCHH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECSSSHH
T ss_pred             -CCCCEEEEccCCCCCC----CCCHH---HHHHHHHHHHHHHHHHHHhhC-CCeEEEEeCCcHH
Confidence             3689999999964321    12222   346666666666777776663 5667777765443

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=96.88  E-value=0.0039  Score=51.60  Aligned_cols=73  Identities=19%  Similarity=0.345  Sum_probs=52.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++++++++|.| .|.+|+++++.+...|++|++++|+.+..+..    .+.+.+.  +  +.   ++++++       +
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~----~~~g~~~--~--~~---~~l~~~-------l  211 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARI----AEMGMEP--F--HI---SKAAQE-------L  211 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTSEE--E--EG---GGHHHH-------T
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH----HHCCCee--c--Ch---hhHHHH-------h
Confidence            368999999999 48999999999999999999999998664433    2334332  1  11   222222       2


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      ...|+++++...
T Consensus       212 ~~aDvVi~~~p~  223 (293)
T 3d4o_A          212 RDVDVCINTIPA  223 (293)
T ss_dssp             TTCSEEEECCSS
T ss_pred             cCCCEEEECCCh
Confidence            479999998753

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=96.85  E-value=0.0058  Score=51.02  Aligned_cols=115  Identities=15%  Similarity=0.086  Sum_probs=79.5

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|.|+|+ |.+|.+++..|+..+  ..|+++|++++.++....++.+..   .++.+. .+  +.++           +
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~-~~--~~~a-----------~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVW-AG--SYGD-----------L   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEE-EC--CGGG-----------G
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEE-EC--CHHH-----------h
Confidence            36899998 999999999999887  469999999988887777776531   122222 22  2221           2


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ...|++|..+|....++    .+..   +.+..|..-...+.+.+.++ .+.+.|+++|....
T Consensus        66 ~~aD~Vii~ag~~~~~g----~~r~---dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~tNPv~  120 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRPG----ETRL---QLLDRNAQVFAQVVPRVLEA-APEAVLLVATNPVD  120 (310)
T ss_dssp             TTEEEEEECCCCCCCTT----CCHH---HHHHHHHHHHHHHHHHHHHH-CTTCEEEECSSSHH
T ss_pred             CCCCEEEECCCCCCCCC----cCHH---HHHHhhHHHHHHHHHHHHHH-CCCcEEEEecCchH
Confidence            37999999999753222    2333   44777777777777777776 46788888876554

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.84  E-value=0.0017  Score=54.40  Aligned_cols=95  Identities=20%  Similarity=0.260  Sum_probs=65.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|...+..+...|++|+.+++.+ +.    +.+++.|.+..   .|..+++.+.       +...++
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~----~~~~~lGa~~~---i~~~~~~~~~-------~~~~g~  216 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH----AFLKALGAEQC---INYHEEDFLL-------AISTPV  216 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH----HHHHHHTCSEE---EETTTSCHHH-------HCCSCE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH----HHHHHcCCCEE---EeCCCcchhh-------hhccCC
Confidence            589999999999999999999988999998887543 32    33344565432   3444433221       122479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      |+++.++|..                           ..+..+..++++|+++.++.
T Consensus       217 D~v~d~~g~~---------------------------~~~~~~~~l~~~G~iv~~g~  246 (321)
T 3tqh_A          217 DAVIDLVGGD---------------------------VGIQSIDCLKETGCIVSVPT  246 (321)
T ss_dssp             EEEEESSCHH---------------------------HHHHHGGGEEEEEEEEECCS
T ss_pred             CEEEECCCcH---------------------------HHHHHHHhccCCCEEEEeCC
Confidence            9999999831                           01345677888899998753

>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*

Probab=96.82  E-value=0.017  Score=48.35  Aligned_cols=115  Identities=12%  Similarity=0.050  Sum_probs=72.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCC----eEEEEEecCCCHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGI----EVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++.|+|+ |.+|..++..|+..|.  .|+++|++++.++....++.+...    +..+. .|  +.+           
T Consensus         6 ~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~-~~--~~~-----------   70 (316)
T 1ldn_A            6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIW-HG--DYD-----------   70 (316)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEE-EC--CGG-----------
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEE-cC--cHH-----------
Confidence            468999998 9999999999998874  699999998766655555544211    22222 11  211           


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .+...|++|.++|....++  .  +..   +.+..|..-...+.+.+.++. +.+.++++|...
T Consensus        71 al~~aDvViia~~~~~~~g--~--~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~~iv~tNPv  126 (316)
T 1ldn_A           71 DCRDADLVVICAGANQKPG--E--TRL---DLVDKNIAIFRSIVESVMASG-FQGLFLVATNPV  126 (316)
T ss_dssp             GTTTCSEEEECCSCCCCTT--T--CSG---GGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSSH
T ss_pred             HhCCCCEEEEcCCCCCCCC--C--CHH---HHHHcChHHHHHHHHHHHHHC-CCCEEEEeCCch
Confidence            1237999999999754332  1  222   234555544445555555543 566677766543

>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*

Probab=96.81  E-value=0.035  Score=45.87  Aligned_cols=115  Identities=8%  Similarity=-0.047  Sum_probs=78.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +|.|+|+ |+||.+++..|+.++.  +++++|.+++..+....++.+.    +........+  |.+.           +
T Consensus         2 KV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~~--d~~~-----------~   67 (294)
T 2x0j_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGA--DYSL-----------L   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecCC--CHHH-----------h
Confidence            4788895 9999999999988874  4999999998888777777652    2222222221  2221           2


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ..-|++|..||....++    .+.+   +.++.|..=.-.+.+.+.++- +++.++.+|....
T Consensus        68 ~~aDvVvitAG~prkpG----mtR~---dLl~~Na~I~~~i~~~i~~~~-p~aivlvvsNPvd  122 (294)
T 2x0j_A           68 KGSEIIVVTAGLARKPG----MTRL---DLAHKNAGIIKDIAKKIVENA-PESKILVVTNPMD  122 (294)
T ss_dssp             TTCSEEEECCCCCCCSS----SCHH---HHHHHHHHHHHHHHHHHHTTS-TTCEEEECSSSHH
T ss_pred             CCCCEEEEecCCCCCCC----CchH---HHHHHHHHHHHHHHHHHHhcC-CceEEEEecCcch
Confidence            36899999999754332    3444   448888887777777777653 5567777776543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.79  E-value=0.0012  Score=53.55  Aligned_cols=43  Identities=16%  Similarity=0.142  Sum_probs=36.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAV   53 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~   53 (255)
                      .+++ +++|.|+ ||.|++++..|++.|+ +|++++|+.++.+++.
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la  149 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD  149 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH
Confidence            4578 8999987 8999999999999998 7999999987765543

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=96.77  E-value=0.0022  Score=54.60  Aligned_cols=82  Identities=18%  Similarity=0.297  Sum_probs=61.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.|+ ||+|.++++.|+..|.. +.++|++.                   .+.+.+.+.+.+.+  .++..
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~  192 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSE  192 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCCCeEEE
Confidence            4678999999987 78999999999999975 88888753                   35566667776654  46777


Q ss_pred             EEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           66 IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        66 ~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      +..+++....+..        +...|++|.+..
T Consensus       193 ~~~~i~~~~~~~~--------~~~~DlVvd~~D  217 (353)
T 3h5n_A          193 IALNINDYTDLHK--------VPEADIWVVSAD  217 (353)
T ss_dssp             EECCCCSGGGGGG--------SCCCSEEEECCC
T ss_pred             eecccCchhhhhH--------hccCCEEEEecC
Confidence            7777776543222        347999998764

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=96.76  E-value=0.0056  Score=55.42  Aligned_cols=90  Identities=14%  Similarity=0.161  Sum_probs=59.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh-------------------hHHHHHHHHHHHcCC--eEEEE
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ-------------------KNVDKAVEKLKALGI--EVIGI   66 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~-------------------~~~~~~~~~~~~~~~--~~~~~   66 (255)
                      +|++++|+|.|+ ||+|.++++.|+..|.. +.++|.+.                   .+.+.+.+.+++.+.  ++..+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP~V~v~~~  401 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATGV  401 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCTTCEEEEE
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCCCcEEEEe
Confidence            578999999987 69999999999999985 88888853                   456777777777654  45555


Q ss_pred             EecC-------CCHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           67 ICHV-------SNEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        67 ~~D~-------~~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ..++       ++++....-.+.+.+.+...|+||.+..-
T Consensus       402 ~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn  441 (615)
T 4gsl_A          402 KLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDS  441 (615)
T ss_dssp             CCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSS
T ss_pred             eccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCC
Confidence            4443       22221111112222223368999988764

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=96.76  E-value=0.006  Score=52.68  Aligned_cols=115  Identities=13%  Similarity=0.140  Sum_probs=68.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   88 (255)
                      .|+++||+|+ |++|...+......|+ +|+.+++++++++..    ++.|.+  +  .|..+++.+.+.+.++.  .+ 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~~~~~~~~~--~g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLKLL----SDAGFE--T--IDLRNSAPLRDQIDQIL--GKP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH----HTTTCE--E--EETTSSSCHHHHHHHHH--SSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH----HHcCCc--E--EcCCCcchHHHHHHHHh--CCC
Confidence            5889999996 9999999888877899 799999998776543    345653  2  34444322111122221  13 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|++|.++|... ...-.+..           ....-...+..+..++++|+++.++..
T Consensus       254 g~Dvvid~~g~~~-~~~~~~~~-----------~~~~~~~~~~~~~~l~~gG~iv~~G~~  301 (398)
T 2dph_A          254 EVDCGVDAVGFEA-HGLGDEAN-----------TETPNGALNSLFDVVRAGGAIGIPGIY  301 (398)
T ss_dssp             CEEEEEECSCTTC-BCSGGGTT-----------SBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred             CCCEEEECCCCcc-cccccccc-----------ccccHHHHHHHHHHHhcCCEEEEeccc
Confidence            6999999998531 00000000           000001234556667788899888754

>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*

Probab=96.76  E-value=0.027  Score=46.87  Aligned_cols=112  Identities=13%  Similarity=0.130  Sum_probs=75.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++.|+|+ |.+|..++..|+..  |.+|++++++++.++....++.+.      ..++.. .   ++.+.          
T Consensus         2 kI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t---~d~~~----------   66 (310)
T 1guz_A            2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-S---NDYAD----------   66 (310)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-E---SCGGG----------
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-C---CCHHH----------
Confidence            5889998 99999999999985  788999999998877654444321      112221 1   22111          


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       +...|++|.+++...  .+  ..+   ..+.+..|+.-...+.+.+.++. +.+.++.++...
T Consensus        67 -l~~aDvViiav~~p~--~~--g~~---r~dl~~~n~~i~~~i~~~i~~~~-~~~~viv~tNP~  121 (310)
T 1guz_A           67 -TANSDIVIITAGLPR--KP--GMT---REDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSNPL  121 (310)
T ss_dssp             -GTTCSEEEECCSCCC--CT--TCC---HHHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCSSH
T ss_pred             -HCCCCEEEEeCCCCC--CC--CCC---HHHHHHHHHHHHHHHHHHHHHhC-CCcEEEEEcCch
Confidence             236899999998532  11  122   23457778777778888888774 667777776544

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.74  E-value=0.0031  Score=53.83  Aligned_cols=47  Identities=21%  Similarity=0.356  Sum_probs=41.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      +|+||+++|.|. |.+|..+++.|.+.|++|++++++.+.+++..+++
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~  216 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEE  216 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHc
Confidence            689999999997 78999999999999999999999988777666553

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=96.74  E-value=0.03  Score=43.50  Aligned_cols=99  Identities=10%  Similarity=0.169  Sum_probs=70.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC--eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI--EVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++++|-.|++.|.   ++..+++.+.+|++++.+++.++...+.++..+.  ++.++..|..+.-          ...+
T Consensus        55 ~~~~vLDlGcG~G~---~~~~la~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~----------~~~~  121 (204)
T 3njr_A           55 RGELLWDIGGGSGS---VSVEWCLAGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAAL----------ADLP  121 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGG----------TTSC
T ss_pred             CCCEEEEecCCCCH---HHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhc----------ccCC
Confidence            47799999987653   3444555588999999999999888888877653  5899999986511          1224


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .+|.++.+.+.                        ..- +++.+...++++|++++...
T Consensus       122 ~~D~v~~~~~~------------------------~~~-~l~~~~~~LkpgG~lv~~~~  155 (204)
T 3njr_A          122 LPEAVFIGGGG------------------------SQA-LYDRLWEWLAPGTRIVANAV  155 (204)
T ss_dssp             CCSEEEECSCC------------------------CHH-HHHHHHHHSCTTCEEEEEEC
T ss_pred             CCCEEEECCcc------------------------cHH-HHHHHHHhcCCCcEEEEEec
Confidence            78999876632                        012 56666777888898887543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=96.70  E-value=0.0069  Score=49.13  Aligned_cols=88  Identities=15%  Similarity=0.158  Sum_probs=58.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHH--------Hc--CCeEEEEEecCCCHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLK--------AL--GIEVIGIICHVSNEQHRK   77 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~--------~~--~~~~~~~~~D~~~~~~~~   77 (255)
                      ++.+.++.|.|+ |.+|..+++.|++.|+. |.+++|+++..++..+.+.        +.  ..++.+  .- ..+..+.
T Consensus         7 ~~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~Dvvi--~a-v~~~~~~   82 (266)
T 3d1l_A            7 SIEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQKVEAEYTTDLAEVNPYAKLYI--VS-LKDSAFA   82 (266)
T ss_dssp             CGGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTTCEEESCGGGSCSCCSEEE--EC-CCHHHHH
T ss_pred             CCCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCceeCCHHHHhcCCCEEE--Ee-cCHHHHH
Confidence            344567899986 99999999999999998 8899999988777655421        10  112222  11 2344567


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCC
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~  100 (255)
                      .+++++.....+=.++|++.+..
T Consensus        83 ~v~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           83 ELLQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHHHhhcCCCcEEEECCCCC
Confidence            77777755433334677777643

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=96.68  E-value=0.0033  Score=54.71  Aligned_cols=74  Identities=9%  Similarity=0.132  Sum_probs=53.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +..++|.|. |-+|+.+++.|.+.|..|++++++++..+...    ..+  +.++.+|.++++.++++      ...+.|
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~----~~g--~~vi~GDat~~~~L~~a------gi~~A~   70 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR----KFG--MKVFYGDATRMDLLESA------GAAKAE   70 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH----HTT--CCCEESCTTCHHHHHHT------TTTTCS
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH----hCC--CeEEEcCCCCHHHHHhc------CCCccC
Confidence            356888986 77999999999999999999999998876543    333  33466787777665543      012566


Q ss_pred             EEEECCC
Q 025259           92 VFVLNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      .+|.+.+
T Consensus        71 ~viv~~~   77 (413)
T 3l9w_A           71 VLINAID   77 (413)
T ss_dssp             EEEECCS
T ss_pred             EEEECCC
Confidence            6666554

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=96.59  E-value=0.0042  Score=53.47  Aligned_cols=43  Identities=14%  Similarity=0.095  Sum_probs=38.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      ++.+++++|+|+ |.+|+.+++.+...|+.|++++++++.++..
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~  211 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQV  211 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence            578999999996 8999999999999999999999998776554

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.58  E-value=0.007  Score=51.00  Aligned_cols=71  Identities=17%  Similarity=0.199  Sum_probs=51.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++++++.|.|. |.+|+++++.|+..|++|++++|+.+..+..    ...+..  .     .+   ++.+++      
T Consensus       151 ~~l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~----~~~g~~--~-----~~---l~e~l~------  209 (330)
T 2gcg_A          151 YGLTQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEA----AEFQAE--F-----VS---TPELAA------  209 (330)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHH----HTTTCE--E-----CC---HHHHHH------
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHH----HhcCce--e-----CC---HHHHHh------
Confidence            4689999999986 9999999999999999999999987654332    222321  1     12   223333      


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                       ..|+++.+....
T Consensus       210 -~aDvVi~~vp~~  221 (330)
T 2gcg_A          210 -QSDFIVVACSLT  221 (330)
T ss_dssp             -HCSEEEECCCCC
T ss_pred             -hCCEEEEeCCCC
Confidence             489999988754

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.58  E-value=0.0093  Score=49.93  Aligned_cols=88  Identities=13%  Similarity=0.163  Sum_probs=59.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHH--cCCeEEEEEecCCCHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK-------LKA--LGIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~   79 (255)
                      +.+.++|.|.|. |.+|..+++.|++.|+.|++++|+++..++..+.       +.+  ...++.  ..-+.++..++.+
T Consensus        28 ~~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g~~~~~~~~e~~~~aDvV--i~~vp~~~~~~~v  104 (320)
T 4dll_A           28 DPYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARAASLAALGATIHEQARAAARDADIV--VSMLENGAVVQDV  104 (320)
T ss_dssp             -CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTTCEEESSHHHHHTTCSEE--EECCSSHHHHHHH
T ss_pred             ccCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCCCEeeCCHHHHHhcCCEE--EEECCCHHHHHHH
Confidence            345568888865 8999999999999999999999999887665431       111  122333  3345566777777


Q ss_pred             HH--HHHHHcCCCcEEEECCCC
Q 025259           80 ID--KTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        80 ~~--~~~~~~g~~d~lv~~ag~   99 (255)
                      +.  .+.+...+-.++|++...
T Consensus       105 ~~~~~~~~~l~~~~~vi~~st~  126 (320)
T 4dll_A          105 LFAQGVAAAMKPGSLFLDMASI  126 (320)
T ss_dssp             HTTTCHHHHCCTTCEEEECSCC
T ss_pred             HcchhHHhhCCCCCEEEecCCC
Confidence            75  555555455677776653

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.0072  Score=52.10  Aligned_cols=115  Identities=15%  Similarity=0.166  Sum_probs=69.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|+++||+|+ |++|...+......|+ .|+++++++++++..    ++.|.+  .  .|.++++.+.   +++.+.. +
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a----~~lGa~--~--i~~~~~~~~~---~~v~~~t~g  252 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFE--I--ADLSLDTPLH---EQIAALLGE  252 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCE--E--EETTSSSCHH---HHHHHHHSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH----HHcCCc--E--EccCCcchHH---HHHHHHhCC
Confidence            5889999995 9999999888777899 588999988776544    345654  2  3444433222   2232222 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ++|++|.++|... ...-.+..          |...+-...+..+..++++|+++.++..
T Consensus       253 ~g~Dvvid~~G~~~-~~~~~~~~----------~~~~~~~~~~~~~~~l~~~G~iv~~G~~  302 (398)
T 1kol_A          253 PEVDCAVDAVGFEA-RGHGHEGA----------KHEAPATVLNSLMQVTRVAGKIGIPGLY  302 (398)
T ss_dssp             SCEEEEEECCCTTC-BCSSTTGG----------GSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             CCCCEEEECCCCcc-cccccccc----------cccchHHHHHHHHHHHhcCCEEEEeccc
Confidence             6999999999532 10000000          0011111345566777788999988753

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.53  E-value=0.01  Score=47.98  Aligned_cols=106  Identities=9%  Similarity=0.027  Sum_probs=73.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH------------------cCCeEEEEEecCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA------------------LGIEVIGIICHVSN   72 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~------------------~~~~~~~~~~D~~~   72 (255)
                      .+.+||..|++.|.-   +..|++.|++|++++.++..++...++...                  .+.++.++.+|+.+
T Consensus        68 ~~~~vLD~GCG~G~~---~~~La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           68 SGLRVFFPLCGKAIE---MKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CSCEEEETTCTTCTH---HHHHHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCeEEEeCCCCcHH---HHHHHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            678999999887753   567888899999999999998877655421                  23578999999987


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           73 EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        73 ~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      ...         ...+.+|+++.+......       ++++.           -.+++.+...++++|++++++
T Consensus       145 l~~---------~~~~~FD~V~~~~~l~~l-------~~~~~-----------~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          145 LPR---------ANIGKFDRIWDRGALVAI-------NPGDH-----------DRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             GGG---------GCCCCEEEEEESSSTTTS-------CGGGH-----------HHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCc---------ccCCCEEEEEEhhhhhhC-------CHHHH-----------HHHHHHHHHHcCCCeEEEEEE
Confidence            431         012579999987654321       11111           234567778888889876554

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=96.51  E-value=0.027  Score=47.03  Aligned_cols=115  Identities=17%  Similarity=0.119  Sum_probs=71.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+++.|.|+ |.+|.+++..|+..|. +|++++++++.++....++...      ..++...    ++.+          
T Consensus         4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t----~d~~----------   68 (317)
T 2ewd_A            4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT----DDYA----------   68 (317)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE----SCGG----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH----------
Confidence            357999998 9999999999999998 8999999988777643333221      2223211    1211          


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                       .+...|++|.++|....++    .+.++   .+..|..-...+.+.+.++. +...++++|...+
T Consensus        69 -a~~~aDiVi~avg~p~~~g----~~r~d---~~~~~~~i~~~i~~~i~~~~-~~~iii~~sNp~~  125 (317)
T 2ewd_A           69 -DISGSDVVIITASIPGRPK----DDRSE---LLFGNARILDSVAEGVKKYC-PNAFVICITNPLD  125 (317)
T ss_dssp             -GGTTCSEEEECCCCSSCCS----SCGGG---GHHHHHHHHHHHHHHHHHHC-TTSEEEECCSSHH
T ss_pred             -HhCCCCEEEEeCCCCCCCC----CcHHH---HHHhhHHHHHHHHHHHHHHC-CCcEEEEeCChHH
Confidence             1236899999999643222    12222   24444444455556665553 4566777765543

>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}

Probab=96.51  E-value=0.022  Score=47.43  Aligned_cols=115  Identities=14%  Similarity=0.190  Sum_probs=76.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|.|+|+ |.+|..++..++..|. .|+++|++++.++....++.+.    +....+...  .|.+           .+.
T Consensus         1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~-----------a~~   66 (308)
T 2d4a_B            1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE-----------DMR   66 (308)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----------GGT
T ss_pred             CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----------HhC
Confidence            4789998 9999999999998887 5999999998887766666542    212111111  2211           123


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ..|++|..+|....++    .+..   +.+..|..-...+.+.+.++- +.+.++++|....
T Consensus        67 ~aD~Vi~~ag~~~k~G----~~r~---dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNPv~  120 (308)
T 2d4a_B           67 GSDIVLVTAGIGRKPG----MTRE---QLLEANANTMADLAEKIKAYA-KDAIVVITTNPVD  120 (308)
T ss_dssp             TCSEEEECCSCCCCSS----CCTH---HHHHHHHHHHHHHHHHHHHHC-TTCEEEECCSSHH
T ss_pred             CCCEEEEeCCCCCCCC----CcHH---HHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCCchH
Confidence            7999999999754222    2332   446677766666677666653 6778888876543

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=96.50  E-value=0.007  Score=49.72  Aligned_cols=41  Identities=7%  Similarity=0.126  Sum_probs=36.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV   53 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~   53 (255)
                      +++.|.|++|.+|.++++.|++.|++|++++|+++..+...
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~   52 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQ   52 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence            47999999999999999999999999999999988776654

>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*

Probab=96.49  E-value=0.026  Score=47.28  Aligned_cols=118  Identities=14%  Similarity=0.096  Sum_probs=73.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++|.|+|+ |.+|..++..|+..|. +|+++|++++.++.....++..      ..++...    +|.+           
T Consensus         5 ~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t----~d~~-----------   68 (322)
T 1t2d_A            5 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGS----NTYD-----------   68 (322)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEE----CCGG-----------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEEC----CCHH-----------
Confidence            47999998 9999999999999998 8999999998887665555432      2223221    2211           


Q ss_pred             HcCCCcEEEECCCCCCCCCCc-CCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAADL-LKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      .+...|++|.++|....++.. .+...   .+.+..|+.-...+.+.+.++. +.+.++++|...+
T Consensus        69 al~~aD~Vi~a~g~p~k~g~~~qe~~r---~dl~~~n~~i~~~i~~~i~~~~-p~a~iiv~tNP~~  130 (322)
T 1t2d_A           69 DLAGADVVIVTAGFTKAPGKSDKEWNR---DDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNPVD  130 (322)
T ss_dssp             GGTTCSEEEECCSCSSCTTCCSTTCCG---GGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSSHH
T ss_pred             HhCCCCEEEEeCCCCCCCCCCcccccH---HHHHHHHHHHHHHHHHHHHHHC-CCeEEEEecCChH
Confidence            123789999999964322110 00001   1225555555555566666554 5667777765543

>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*

Probab=96.47  E-value=0.061  Score=44.68  Aligned_cols=116  Identities=13%  Similarity=0.072  Sum_probs=71.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++.|.|+ |.+|..++..|+..|.  +|++++|+++.++....++...   .....+...  ++.+.           
T Consensus         7 ~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~-----------   72 (319)
T 1lld_A            7 PTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI-----------   72 (319)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG-----------
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC--CCHHH-----------
Confidence            357999998 9999999999999998  8999999987665322222221   011111111  12111           


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +...|++|.+++....+    ..+.   .+.+..|..-...+.+.+.++ .+...|+.++...
T Consensus        73 ~~~aD~Vii~v~~~~~~----g~~r---~~~~~~n~~~~~~~~~~i~~~-~~~~~vi~~~Np~  127 (319)
T 1lld_A           73 CRDADMVVITAGPRQKP----GQSR---LELVGATVNILKAIMPNLVKV-APNAIYMLITNPV  127 (319)
T ss_dssp             GTTCSEEEECCCCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSSH
T ss_pred             hCCCCEEEECCCCCCCC----CCCH---HHHHHHHHHHHHHHHHHHHHh-CCCceEEEecCch
Confidence            23689999999864322    1223   234666776666667777664 4555666666543

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=96.46  E-value=0.011  Score=48.90  Aligned_cols=85  Identities=9%  Similarity=0.073  Sum_probs=58.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK-------LKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++.|.| .|.+|..+++.|++.|+.|++++|+++..++..+.       +.+.-. ..++..-+.++..++..++.+..
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~-aDvvi~~vp~~~~~~~v~~~l~~   93 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAA-ADLIHITVLDDAQVREVVGELAG   93 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTT-SSEEEECCSSHHHHHHHHHHHHT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHh-CCEEEEECCChHHHHHHHHHHHH
Confidence            4677776 68999999999999999999999998877655431       111111 22334445667788888877766


Q ss_pred             HcCCCcEEEECCCC
Q 025259           86 KYGRIDVFVLNAAV   99 (255)
Q Consensus        86 ~~g~~d~lv~~ag~   99 (255)
                      ...+-.++|++...
T Consensus        94 ~l~~g~ivv~~st~  107 (296)
T 3qha_A           94 HAKPGTVIAIHSTI  107 (296)
T ss_dssp             TCCTTCEEEECSCC
T ss_pred             hcCCCCEEEEeCCC
Confidence            54444677776653

>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}

Probab=96.46  E-value=0.0087  Score=49.78  Aligned_cols=90  Identities=14%  Similarity=0.065  Sum_probs=58.0

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHH--cCCeEEEEEecCCCHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK-------LKA--LGIEVIGIICHVSNEQHR   76 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~   76 (255)
                      |...++.+++.|.| .|.+|.++++.|++.|++|++++|+++..++..+.       +.+  ...++  +..-+.++..+
T Consensus         3 m~~~~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~e~~~~aDv--Vi~~vp~~~~~   79 (306)
T 3l6d_A            3 LSDESFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAAGAHLCESVKAALSASPA--TIFVLLDNHAT   79 (306)
T ss_dssp             CCCCCCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTCEECSSHHHHHHHSSE--EEECCSSHHHH
T ss_pred             CCcccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeecCCHHHHHhcCCE--EEEEeCCHHHH
Confidence            33445567788886 68999999999999999999999999877665432       000  01233  33345566666


Q ss_pred             HHHHH--HHHHHcCCCcEEEECCCC
Q 025259           77 KNLID--KTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        77 ~~~~~--~~~~~~g~~d~lv~~ag~   99 (255)
                      +.++.  .+.. ..+-.++|++...
T Consensus        80 ~~v~~~~~l~~-~~~g~ivid~st~  103 (306)
T 3l6d_A           80 HEVLGMPGVAR-ALAHRTIVDYTTN  103 (306)
T ss_dssp             HHHHTSTTHHH-HTTTCEEEECCCC
T ss_pred             HHHhcccchhh-ccCCCEEEECCCC
Confidence            76664  4432 2334567776554

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.44  E-value=0.0041  Score=50.98  Aligned_cols=39  Identities=28%  Similarity=0.319  Sum_probs=35.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .+++||+++|.|.++-+|+.+++.|+..|++|.++.+..
T Consensus       156 i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          156 IDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            468999999999999999999999999999999987743

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.42  E-value=0.013  Score=45.40  Aligned_cols=106  Identities=16%  Similarity=0.093  Sum_probs=71.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-------------cCCeEEEEEecCCCHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-------------LGIEVIGIICHVSNEQHRK   77 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~D~~~~~~~~   77 (255)
                      .+.+||..|++.|.-   +..|++.|++|+++|.+++.++...+....             ...++.++.+|+.+...- 
T Consensus        22 ~~~~vLD~GCG~G~~---~~~la~~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~-   97 (203)
T 1pjz_A           22 PGARVLVPLCGKSQD---MSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR-   97 (203)
T ss_dssp             TTCEEEETTTCCSHH---HHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH-
T ss_pred             CCCEEEEeCCCCcHh---HHHHHHCCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc-
Confidence            678999999887743   456777799999999999998887766532             134688899999875421 


Q ss_pred             HHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           78 NLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        78 ~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                         +     .+.+|.++.+.....       .+.++.           -.+++.+...++++|++++++
T Consensus        98 ---~-----~~~fD~v~~~~~l~~-------l~~~~~-----------~~~l~~~~r~LkpgG~~~l~~  140 (203)
T 1pjz_A           98 ---D-----IGHCAAFYDRAAMIA-------LPADMR-----------ERYVQHLEALMPQACSGLLIT  140 (203)
T ss_dssp             ---H-----HHSEEEEEEESCGGG-------SCHHHH-----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred             ---c-----CCCEEEEEECcchhh-------CCHHHH-----------HHHHHHHHHHcCCCcEEEEEE
Confidence               1     127999987654422       122222           134567777788889855444

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.42  E-value=0.0098  Score=48.88  Aligned_cols=83  Identities=14%  Similarity=0.104  Sum_probs=57.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH-------HHH--cCCeEEEEEecCCCHHHHHHHH---
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK-------LKA--LGIEVIGIICHVSNEQHRKNLI---   80 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~-------~~~--~~~~~~~~~~D~~~~~~~~~~~---   80 (255)
                      +++.|.|. |.+|..+++.|++.|++|++.+|+++..++..+.       +.+  ...++  +..-+.++..++..+   
T Consensus         2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~~aDv--vi~~vp~~~~~~~v~~~~   78 (287)
T 3pef_A            2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATPCEVVESCPV--TFAMLADPAAAEEVCFGK   78 (287)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHTTCEECSSHHHHHHHCSE--EEECCSSHHHHHHHHHST
T ss_pred             CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCCCeecCCHHHHHhcCCE--EEEEcCCHHHHHHHHcCc
Confidence            46888874 8999999999999999999999998877665431       111  01233  334455667777777   


Q ss_pred             HHHHHHcCCCcEEEECCC
Q 025259           81 DKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag   98 (255)
                      +.+.....+=.++|++.+
T Consensus        79 ~~l~~~l~~~~~vi~~st   96 (287)
T 3pef_A           79 HGVLEGIGEGRGYVDMST   96 (287)
T ss_dssp             TCHHHHCCTTCEEEECSC
T ss_pred             chHhhcCCCCCEEEeCCC
Confidence            666665544467777754

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.40  E-value=0.018  Score=48.92  Aligned_cols=100  Identities=19%  Similarity=0.228  Sum_probs=66.5

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+++||++.|.|- |.||+++++.+...|++|+..+|+...     +.....+.+.      .   ++++.+++     
T Consensus       155 ~~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-----~~~~~~g~~~------~---~~l~ell~-----  214 (352)
T 3gg9_A          155 GRVLKGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENSK-----ERARADGFAV------A---ESKDALFE-----  214 (352)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHHH-----HHHHHTTCEE------C---SSHHHHHH-----
T ss_pred             CccCCCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCCH-----HHHHhcCceE------e---CCHHHHHh-----
Confidence            45789999999985 899999999999999999999987532     1222334321      1   12333443     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                        ..|+|+.+.........+  .                   .+..++.|+++..+|+++...
T Consensus       215 --~aDiV~l~~Plt~~t~~l--i-------------------~~~~l~~mk~gailIN~aRg~  254 (352)
T 3gg9_A          215 --QSDVLSVHLRLNDETRSI--I-------------------TVADLTRMKPTALFVNTSRAE  254 (352)
T ss_dssp             --HCSEEEECCCCSTTTTTC--B-------------------CHHHHTTSCTTCEEEECSCGG
T ss_pred             --hCCEEEEeccCcHHHHHh--h-------------------CHHHHhhCCCCcEEEECCCch
Confidence              489999888754311111  1                   123467788888899888643

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=96.39  E-value=0.0071  Score=49.96  Aligned_cols=95  Identities=15%  Similarity=0.187  Sum_probs=65.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++||++.|.|- |.||+++++.+...|++|+..+|+.+..+.           .   . ..   ++++.+++      
T Consensus       118 ~~l~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~-----------~---~-~~---~~l~ell~------  172 (290)
T 3gvx_A          118 TLLYGKALGILGY-GGIGRRVAHLAKAFGMRVIAYTRSSVDQNV-----------D---V-IS---ESPADLFR------  172 (290)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSCCCTTC-----------S---E-EC---SSHHHHHH------
T ss_pred             eeeecchheeecc-CchhHHHHHHHHhhCcEEEEEecccccccc-----------c---c-cc---CChHHHhh------
Confidence            4689999999985 789999999999999999999998754211           0   0 11   12333343      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                       ..|+++.+.........+.                     .+..++.|+++..+|+++...
T Consensus       173 -~aDiV~l~~P~t~~t~~li---------------------~~~~l~~mk~gailIN~aRG~  212 (290)
T 3gvx_A          173 -QSDFVLIAIPLTDKTRGMV---------------------NSRLLANARKNLTIVNVARAD  212 (290)
T ss_dssp             -HCSEEEECCCCCTTTTTCB---------------------SHHHHTTCCTTCEEEECSCGG
T ss_pred             -ccCeEEEEeeccccchhhh---------------------hHHHHhhhhcCceEEEeehhc
Confidence             4899999887543111111                     134567788888889888653

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.37  E-value=0.011  Score=49.16  Aligned_cols=97  Identities=15%  Similarity=0.205  Sum_probs=64.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++.|+++.|.|. |.||+++++.+...|++|+.++|+.+. +.    ..+.+.+.       .+   ++.+++      
T Consensus       138 ~~l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~----~~~~g~~~-------~~---l~ell~------  195 (307)
T 1wwk_A          138 IELEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ER----AKEVNGKF-------VD---LETLLK------  195 (307)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HH----HHHTTCEE-------CC---HHHHHH------
T ss_pred             cccCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hh----HhhcCccc-------cC---HHHHHh------
Confidence            4689999999975 999999999999999999999998765 21    12334321       12   233333      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ..|+++.+.........+.                     .+..++.|+++..+|++++.
T Consensus       196 -~aDvV~l~~p~~~~t~~li---------------------~~~~l~~mk~ga~lin~arg  234 (307)
T 1wwk_A          196 -ESDVVTIHVPLVESTYHLI---------------------NEERLKLMKKTAILINTSRG  234 (307)
T ss_dssp             -HCSEEEECCCCSTTTTTCB---------------------CHHHHHHSCTTCEEEECSCG
T ss_pred             -hCCEEEEecCCChHHhhhc---------------------CHHHHhcCCCCeEEEECCCC
Confidence             4899999887543111110                     12344567777788888873

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=96.32  E-value=0.005  Score=51.32  Aligned_cols=89  Identities=9%  Similarity=0.093  Sum_probs=59.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+|+ |++|...+......|++|+.++ ++++.+.+    ++.|.+..+   |  |   .+    ++   .+++
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~----~~lGa~~v~---~--d---~~----~v---~~g~  200 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALA----AKRGVRHLY---R--E---PS----QV---TQKY  200 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH----HHHTEEEEE---S--S---GG----GC---CSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH----HHcCCCEEE---c--C---HH----Hh---CCCc
Confidence            5899999999 9999999888888899999999 77665543    334543332   2  2   11    22   3479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      |+++.++|...                           .+..+..++++|+++.++.
T Consensus       201 Dvv~d~~g~~~---------------------------~~~~~~~l~~~G~~v~~g~  230 (315)
T 3goh_A          201 FAIFDAVNSQN---------------------------AAALVPSLKANGHIICIQD  230 (315)
T ss_dssp             EEEECC----------------------------------TTGGGEEEEEEEEEECC
T ss_pred             cEEEECCCchh---------------------------HHHHHHHhcCCCEEEEEeC
Confidence            99999998521                           0122566778899998854

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=96.32  E-value=0.0037  Score=58.95  Aligned_cols=98  Identities=14%  Similarity=0.209  Sum_probs=64.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   88 (255)
                      .|++|||.||+|++|.+.+......|++|+.+++++ +.+..    + .+.+..   .|..+.+-    .+.+.+.. | 
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l----~-lga~~v---~~~~~~~~----~~~i~~~t~g~  411 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV----E-LSREHL---ASSRTCDF----EQQFLGATGGR  411 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS----C-SCGGGE---ECSSSSTH----HHHHHHHSCSS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh----h-cChhhe---eecCChhH----HHHHHHHcCCC
Confidence            589999999999999999988888899999988765 22211    1 232222   23333332    23333333 2 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|+++++.|...                           .+..+..+++.|++|.++..
T Consensus       412 GvDvVld~~gg~~---------------------------~~~~l~~l~~~Gr~v~iG~~  444 (795)
T 3slk_A          412 GVDVVLNSLAGEF---------------------------ADASLRMLPRGGRFLELGKT  444 (795)
T ss_dssp             CCSEEEECCCTTT---------------------------THHHHTSCTTCEEEEECCST
T ss_pred             CeEEEEECCCcHH---------------------------HHHHHHHhcCCCEEEEeccc
Confidence            6999999887411                           13445677888999988743

>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}

Probab=96.31  E-value=0.047  Score=45.43  Aligned_cols=38  Identities=11%  Similarity=-0.025  Sum_probs=29.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~   46 (255)
                      +..+.++|.|.|. |.+|..+++.|++.|+ .|++++|++
T Consensus        20 ~~~~~~~I~iIG~-G~mG~~~A~~L~~~G~~~V~~~dr~~   58 (312)
T 3qsg_A           20 FQSNAMKLGFIGF-GEAASAIASGLRQAGAIDMAAYDAAS   58 (312)
T ss_dssp             -----CEEEEECC-SHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred             ccCCCCEEEEECc-cHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence            3444568888875 9999999999999999 899999973

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=96.28  E-value=0.004  Score=52.24  Aligned_cols=97  Identities=19%  Similarity=0.135  Sum_probs=64.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      ++||+|++|++|...+..+...|++|+++++++++++...    +.|.+..+   |..+.+  ...++++  ..+++|++
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~----~lGa~~v~---~~~~~~--~~~~~~~--~~~~~d~v  221 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK----QLGASEVI---SREDVY--DGTLKAL--SKQQWQGA  221 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH----HHTCSEEE---EHHHHC--SSCCCSS--CCCCEEEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH----HcCCcEEE---ECCCch--HHHHHHh--hcCCccEE
Confidence            7999999999999999988889999999999987765443    33543322   221110  0001111  11368999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |.++|. .                          ..+..+..++++|+++.++..
T Consensus       222 id~~g~-~--------------------------~~~~~~~~l~~~G~iv~~G~~  249 (330)
T 1tt7_A          222 VDPVGG-K--------------------------QLASLLSKIQYGGSVAVSGLT  249 (330)
T ss_dssp             EESCCT-H--------------------------HHHHHHTTEEEEEEEEECCCS
T ss_pred             EECCcH-H--------------------------HHHHHHHhhcCCCEEEEEecC
Confidence            999983 1                          023455677788999988754

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=96.28  E-value=0.01  Score=50.20  Aligned_cols=94  Identities=20%  Similarity=0.144  Sum_probs=61.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++||++.|.|. |.||+++++.+...|++|+..+|+++.         ..+  ...    .   .+++++++      
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~~---------~~~--~~~----~---~sl~ell~------  221 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTLS---------GVD--WIA----H---QSPVDLAR------  221 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCT---------TSC--CEE----C---SSHHHHHH------
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCccc---------ccC--cee----c---CCHHHHHh------
Confidence            5789999999987 899999999999999999999998754         111  111    1   12333443      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ..|+|+.+........           .+          +.+..++.|+++..+|+++..
T Consensus       222 -~aDvVil~vP~t~~t~-----------~l----------i~~~~l~~mk~gailIN~aRG  260 (340)
T 4dgs_A          222 -DSDVLAVCVAASAATQ-----------NI----------VDASLLQALGPEGIVVNVARG  260 (340)
T ss_dssp             -TCSEEEECC-------------------------------CHHHHHHTTTTCEEEECSCC
T ss_pred             -cCCEEEEeCCCCHHHH-----------HH----------hhHHHHhcCCCCCEEEECCCC
Confidence             6899998876432000           00          124455667777788888765

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=96.28  E-value=0.01  Score=46.81  Aligned_cols=120  Identities=13%  Similarity=0.098  Sum_probs=74.3

Q ss_pred             CCCEEEEeCCC-Cc-hHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTAST-QG-IGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~-~g-iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++||=.|++ +| ++..+++.+   +.+|++++.+++.++.+.+.++..+.++.++.+|......+.         -+
T Consensus        55 ~~~~vLDlG~G~~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~---------~~  122 (230)
T 3evz_A           55 GGEVALEIGTGHTAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVV---------EG  122 (230)
T ss_dssp             SSCEEEEECCTTTCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTC---------CS
T ss_pred             CCCEEEEcCCCHHHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcc---------cC
Confidence            47788888866 55 455544444   789999999999999988888877778889999975322211         14


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHH---HHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWE---INVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~---~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      ++|+++.|........  .+. .+.. ..+.   ....-...+++.+...++++|.++++.
T Consensus       123 ~fD~I~~npp~~~~~~--~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~  179 (230)
T 3evz_A          123 TFDVIFSAPPYYDKPL--GRV-LTER-EAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL  179 (230)
T ss_dssp             CEEEEEECCCCC-------------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             ceeEEEECCCCcCCcc--ccc-cChh-hhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence            7999998876543111  000 0000 0000   001112556777888888889888763

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=96.26  E-value=0.091  Score=40.39  Aligned_cols=100  Identities=8%  Similarity=0.017  Sum_probs=71.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+.++|-.|++.|.   ++..+++.+  .+|++++.+++.++...+.+...+ .++.++..|..+..          ...
T Consensus        40 ~~~~vLDiG~G~G~---~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~----------~~~  106 (204)
T 3e05_A           40 DDLVMWDIGAGSAS---VSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGL----------DDL  106 (204)
T ss_dssp             TTCEEEEETCTTCH---HHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTC----------TTS
T ss_pred             CCCEEEEECCCCCH---HHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhh----------hcC
Confidence            47799999987654   445555555  789999999999988888777655 46888999886421          112


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      +.+|.++.+....                       ....+++.+...++++|++++..
T Consensus       107 ~~~D~i~~~~~~~-----------------------~~~~~l~~~~~~LkpgG~l~~~~  142 (204)
T 3e05_A          107 PDPDRVFIGGSGG-----------------------MLEEIIDAVDRRLKSEGVIVLNA  142 (204)
T ss_dssp             CCCSEEEESCCTT-----------------------CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred             CCCCEEEECCCCc-----------------------CHHHHHHHHHHhcCCCeEEEEEe
Confidence            4799998876531                       11245677777888889888754

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=96.22  E-value=0.0094  Score=48.59  Aligned_cols=36  Identities=11%  Similarity=0.161  Sum_probs=34.0

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      ++||+++|.|.++-+|+.+++.|+..|++|.++.+.
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999999998764

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=96.22  E-value=0.021  Score=44.60  Aligned_cols=76  Identities=13%  Similarity=0.137  Sum_probs=52.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +++.+++.|.| .|.+|.+++..|++.|++|++++|+++       .  ....++.++.+  - ...++.+++++.....
T Consensus        16 ~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~-------~--~~~aD~vi~av--~-~~~~~~v~~~l~~~~~   82 (209)
T 2raf_A           16 YFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ-------A--TTLGEIVIMAV--P-YPALAALAKQYATQLK   82 (209)
T ss_dssp             ----CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC-------C--SSCCSEEEECS--C-HHHHHHHHHHTHHHHT
T ss_pred             ccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH-------H--hccCCEEEEcC--C-cHHHHHHHHHHHHhcC
Confidence            46678899999 799999999999999999999999876       1  11335554443  2 6677788887765544


Q ss_pred             CCcEEEECCC
Q 025259           89 RIDVFVLNAA   98 (255)
Q Consensus        89 ~~d~lv~~ag   98 (255)
                       =.+++.+..
T Consensus        83 -~~~vi~~~~   91 (209)
T 2raf_A           83 -GKIVVDITN   91 (209)
T ss_dssp             -TSEEEECCC
T ss_pred             -CCEEEEECC
Confidence             235665544

>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A

Probab=96.21  E-value=0.013  Score=53.04  Aligned_cols=62  Identities=13%  Similarity=0.194  Sum_probs=47.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHHcC--CeEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK-------------------QKNVDKAVEKLKALG--IEVIG   65 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~--~~~~~   65 (255)
                      .+|++++|+|.|+ ||+|.++++.|+..|.. +.++|.+                   ..+.+.+.+.+++.+  .++..
T Consensus       323 ~kL~~~kVLIVGa-GGLGs~va~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~  401 (598)
T 3vh1_A          323 DIIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG  401 (598)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHTTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence            4678899999986 68999999999999985 8888654                   256777888887754  44555


Q ss_pred             EEecC
Q 025259           66 IICHV   70 (255)
Q Consensus        66 ~~~D~   70 (255)
                      +..++
T Consensus       402 ~~~~I  406 (598)
T 3vh1_A          402 VKLSI  406 (598)
T ss_dssp             ECCCC
T ss_pred             Eeccc
Confidence            55443

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.20  E-value=0.0026  Score=53.22  Aligned_cols=82  Identities=20%  Similarity=0.103  Sum_probs=54.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI-GIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++|++++|.|++.-+|+.+++.|+..|++|.+++|+...+.+..+++   ....+ ...+..++++.+.+.+.     
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~l---a~~~~~~t~~~~t~~~~L~e~l~-----  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESL---KLNKHHVEDLGEYSEDLLKKCSL-----  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCS---SCCCCEEEEEEECCHHHHHHHHH-----
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHH---hhhcccccccccccHhHHHHHhc-----
Confidence            3789999999999999999999999999999999998732211100100   11111 11111144456655555     


Q ss_pred             cCCCcEEEECCCC
Q 025259           87 YGRIDVFVLNAAV   99 (255)
Q Consensus        87 ~g~~d~lv~~ag~   99 (255)
                        ..|++|...|.
T Consensus       245 --~ADIVIsAtg~  255 (320)
T 1edz_A          245 --DSDVVITGVPS  255 (320)
T ss_dssp             --HCSEEEECCCC
T ss_pred             --cCCEEEECCCC
Confidence              58999999985

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	255
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-66
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	4e-65
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	2e-64
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	1e-62
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-62
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-61
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	3e-61
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	2e-60
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	3e-60
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	1e-59
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	1e-59
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-58
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	3e-58
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	6e-58
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	7e-58
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	9e-58
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	1e-57
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	2e-57
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	7e-57
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-57
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	9e-57
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	2e-56
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	2e-56
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-56
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	5e-56
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	7e-56
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	9e-55
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	2e-54
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-54
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	1e-53
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-53
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	4e-53
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	6e-53
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	4e-52
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	6e-52
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	1e-51
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	4e-51
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	5e-51
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	6e-51
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	6e-50
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-49
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	5e-49
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	8e-49
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	3e-48
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	5e-48
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	2e-47
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	9e-47
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-43
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	4e-42
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-41
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-41
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-40
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-40
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-38
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	8e-38
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	4e-36
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	5e-36
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	2e-32
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	9e-32
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-30
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	3e-30
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	5e-29
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	4e-27
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	5e-26
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-25
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	1e-15
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-11
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	1e-08
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	8e-05

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  203 bits (517), Expect = 7e-66
 Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 6/246 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R + K+AV+T    GIG  +AER  +EGA + I+        +A   ++ LG  V+ + C
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPA--PEAEAAIRNLGRRVLTVKC 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS     +    + +  +GR D+ V NA + P      +       K +EINV S  L+
Sbjct: 60  DVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLI-PFDELTFEQWKKTFEINVDSGFLM 118

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
            +   P M       ++ ++S   +    A   Y  TK A +G T+ALA+++  D   VN
Sbjct: 119 AKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVN 178

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +AP  V T   +A   +            + RL    ++  A AFLASDDAS+ITG+TL
Sbjct: 179 AIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQTL 238

Query: 246 VVAGGM 251
            V GGM
Sbjct: 239 AVDGGM 244

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  200 bits (511), Expect = 4e-65
 Identities = 77/250 (30%), Positives = 121/250 (48%), Gaps = 14/250 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            F GK  +VT   +GIG  +A+    EGA V +   +     +  E  +A+G        
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLR----PEGKEVAEAIGGAFFQ--V 55

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +E+ R   +++     GR+DV V NAA+       L  +     ++ E+N+ + + L
Sbjct: 56  DLEDERERVRFVEEAAYALGRVDVLVNNAAIAAPG-SALTVRLPEWRRVLEVNLTAPMHL 114

Query: 129 MQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
              AA  M+K    ++V ++S+ G       A Y  +K  L+ LT++LA ++AP   RVN
Sbjct: 115 SALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVN 174

Query: 186 CVAPGFVPTHFAQALLGN----DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            VAPG + T      +      +  R+  E    L RLG    +A A+ FLAS+ AS+IT
Sbjct: 175 AVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT 234

Query: 242 GETLVVAGGM 251
           G  L V GGM
Sbjct: 235 GAILPVDGGM 244

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (506), Expect = 2e-64
 Identities = 79/249 (31%), Positives = 124/249 (49%), Gaps = 11/249 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R+ GKV VVT   +GIG G+       GA VVI  + +       ++L       + I+C
Sbjct: 3   RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG----AVFILC 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+ E   K L+ +T+ ++GR+D  V NA  +P      +T      +L E+N+  +  L
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTL 118

Query: 129 MQDAAPHMQKGS-SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
            + A P+++K   +V+ ISS+ G    +    Y  TK A+  +TKALA + +P   RVNC
Sbjct: 119 TKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNC 178

Query: 187 VAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           ++PG + T   + L        A  +       L R+G    + AA  FLAS +A++ TG
Sbjct: 179 ISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLAS-EANFCTG 237

Query: 243 ETLVVAGGM 251
             L+V GG 
Sbjct: 238 IELLVTGGA 246

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  195 bits (496), Expect = 1e-62
 Identities = 68/252 (26%), Positives = 119/252 (47%), Gaps = 9/252 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GKVA++T  T GIGL +A +   EGA V+I+ R     +KA + +     ++     
Sbjct: 3   RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPD-QIQFFQH 61

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
             S+E     L D T + +G +   V NA +      + +T  +   KL  +N+      
Sbjct: 62  DSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVNK-SVEETTTAEWRKLLAVNLDGVFFG 120

Query: 129 MQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT--- 182
            +     M+    G+S++ +SSI G+    ++  Y  +K A+  ++K+ A + A      
Sbjct: 121 TRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDV 180

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN V PG++ T     L G +    +   KT +  +G   ++A    +LAS+++ + TG
Sbjct: 181 RVNTVHPGYIKTPLVDDLPGAEE-AMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG 239

Query: 243 ETLVVAGGMASR 254
              VV GG  ++
Sbjct: 240 SEFVVDGGYTAQ 251

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  194 bits (494), Expect = 2e-62
 Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 10/254 (3%)

Query: 7   AKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           A R+  +G  A+VT  ++GIG G+ E L   GASV   SR QK ++  + + ++ G +V 
Sbjct: 1   AGRWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVE 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
             +C +S+   R+ L++     + G++++ V NA +  Y  +           +  IN +
Sbjct: 61  ASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY-KEAKDYTVEDYSLIMSINFE 119

Query: 124 SSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           ++  L   A P +   +  +VVFISS++G       A+YG TK A+  LT+ LA E A D
Sbjct: 120 AAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKD 179

Query: 182 T-RVNCVAPGFVPTHFAQALLGNDAVRKALE---GKTLLNRLGTTGNMAAAIAFLASDDA 237
             RVN V PG + T   +  + +   ++ L     +  L R+G    +AA +AFL    A
Sbjct: 180 NIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAA 239

Query: 238 SYITGETLVVAGGM 251
           SY+TG+ + V GG+
Sbjct: 240 SYVTGQIIYVDGGL 253

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  192 bits (490), Expect = 1e-61
 Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VIG 65
           RF  KVA++T S+ GIG   A     EGA V I+ R  + +++  +++ A G+    V  
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNS 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEINV 122
           ++  V+ +  +  ++  T+ K+G++D+ V NA     +  +           D    +N+
Sbjct: 62  VVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNL 121

Query: 123 KSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +S I L + A PH+   KG  V   S  +G         Y + K A+   T+  A ++  
Sbjct: 122 RSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQ 181

Query: 181 D-TRVNCVAPGFVPTHFAQALLGND-------AVRKALEGKTLLNRLGTTGNMAAAIAFL 232
              RVN ++PG V T F  A+   +       +    ++       +G   ++A  IAFL
Sbjct: 182 HGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFL 241

Query: 233 ASDD-ASYITGETLVVAGGM 251
           A    +SYI G  LVV GG 
Sbjct: 242 ADRKTSSYIIGHQLVVDGGS 261

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  191 bits (487), Expect = 3e-61
 Identities = 74/251 (29%), Positives = 125/251 (49%), Gaps = 8/251 (3%)

Query: 7   AKRF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
           ++R+  + K  +VT  T+GIG  + E     GA +   +R +  +++ + K +  G +V 
Sbjct: 1   SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVT 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
           G +C  S    R+ L+      + G++D+ + N      +   L             N++
Sbjct: 61  GSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLE 119

Query: 124 SSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           S+  L Q A P ++     +++F+SSIAG    S  ++Y  TK AL  L + LA E A D
Sbjct: 120 SAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASD 179

Query: 182 T-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             R N VAP  + T  A+A+  +D  +K +  +  L R G    +++ +AFL    ASYI
Sbjct: 180 GIRANAVAPAVIATPLAEAVY-DDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYI 238

Query: 241 TGETLVVAGGM 251
           TG+T+ V GG+
Sbjct: 239 TGQTICVDGGL 249

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  189 bits (481), Expect = 2e-60
 Identities = 68/250 (27%), Positives = 113/250 (45%), Gaps = 11/250 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R QGKVA+VT    G+GL V + L  EGA V  S   +    +   +   LG   + +  
Sbjct: 3   RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAE---LGERSMFVRH 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+E     ++     + G ++V V NA +     D+   +     +L +IN +S  + 
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP-GDMETGRLEDFSRLLKINTESVFIG 118

Query: 129 MQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT---RV 184
            Q     M++ G S++ ++S++ + P    A Y  +K A+  LT+A A          RV
Sbjct: 119 CQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRV 178

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGN---MAAAIAFLASDDASYIT 241
           N + P  + T   QA L     ++ +     LNR G       +A  + FLASD++S ++
Sbjct: 179 NSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMS 238

Query: 242 GETLVVAGGM 251
           G  L     +
Sbjct: 239 GSELHADNSI 248

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  188 bits (479), Expect = 3e-60
 Identities = 61/254 (24%), Positives = 118/254 (46%), Gaps = 14/254 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI--EVIG 65
           +R++ ++A+VT ++ GIG  VA  L  +G  VV  +R   N+++   + K+ G    +I 
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIP 65

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
             C +SNE+   ++      ++  +D+ + NA +      LL    S    ++ +NV + 
Sbjct: 66  YRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP-DTLLSGSTSGWKDMFNVNVLAL 124

Query: 126 ILLMQDAAPHMQK----GSSVVFISSIAGYQ--PPSAMAMYGVTKTALLGLTKALAAEMA 179
            +  ++A   M++       ++ I+S++G++  P S    Y  TK A+  LT+ L  E+ 
Sbjct: 125 SICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELR 184

Query: 180 PDT---RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
                 R  C++PG V T FA  L  +D   +         +     ++A A+ ++ S  
Sbjct: 185 EAQTHIRATCISPGVVETQFAFKL--HDKDPEKAAATYEQMKCLKPEDVAEAVIYVLSTP 242

Query: 237 ASYITGETLVVAGG 250
           A    G+  +   G
Sbjct: 243 AHIQIGDIQMRPTG 256

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  187 bits (477), Expect = 1e-59
 Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI---EVIG 65
           RF  K  ++T S+ GIG   A     EGA+V I+ R  + +++  + +   G+   +V  
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV---NPYAADLLKTKESVLDKLWEINV 122
           ++  V+ E  +  +I+ T++++G+IDV V NA     + +          +  K  ++N+
Sbjct: 62  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 121

Query: 123 KSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           ++ I + +   PH+    G  V   S +AG Q       Y + K AL   T++ A ++A 
Sbjct: 122 QAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAK 181

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEG-------KTLLNRLGTTGNMAAAIAFL 232
              RVN V+PG V T F  A+   D   +              +   G   ++A  I FL
Sbjct: 182 FGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILFL 241

Query: 233 ASDDAS-YITGETLVVAGGM 251
           A  + S YI G+++V  GG 
Sbjct: 242 ADRNLSFYILGQSIVADGGT 261

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  187 bits (475), Expect = 1e-59
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 6/253 (2%)

Query: 3   KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE 62
           K N     + KVA+VT + +GIG  +A+ L    + V+  SR QK+ D  V+++K+ G E
Sbjct: 1   KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYE 60

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
             G    VS ++    +I+K + ++  +D+ V N A        L+ K    + +   N+
Sbjct: 61  SSGYAGDVSKKEEISEVINKILTEHKNVDILV-NNAGITRDNLFLRMKNDEWEDVLRTNL 119

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
            S   + Q  +  M   +   ++ ISSI G       A Y  +K  ++G TK+LA E+A 
Sbjct: 120 NSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELAS 179

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
               VN +APGF+ +        ++ ++K +       R+GT   +A    FL+SD + Y
Sbjct: 180 RNITVNAIAPGFISSDMTDK--ISEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY 237

Query: 240 ITGETLVVAGGMA 252
           I G   V+ GG++
Sbjct: 238 INGRVFVIDGGLS 250

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  184 bits (468), Expect = 3e-58
 Identities = 67/260 (25%), Positives = 117/260 (45%), Gaps = 17/260 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           + +G+  ++T    G+G  + +R   EGA V +  +   + ++  E     G  V+GI+ 
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDK---SAERLAELETDHGDNVLGIVG 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD----KLWEINVKS 124
            V + + +K    + V ++G+ID  + NA +  Y+  L+   E  LD    +++ INVK 
Sbjct: 59  DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKG 118

Query: 125 SILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTR 183
            I  ++   P +     +V+F  S AG+ P     +Y   K A++GL + LA E+AP  R
Sbjct: 119 YIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPYVR 178

Query: 184 VNCVAPGFVPTHF--------AQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS- 234
           VN V  G + +              +    +   L+    + R+        A  F A+ 
Sbjct: 179 VNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFATR 238

Query: 235 DDASYITGETLVVAGGMASR 254
            DA+  TG  L   GG+  R
Sbjct: 239 GDAAPATGALLNYDGGLGVR 258

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  184 bits (467), Expect = 3e-58
 Identities = 72/260 (27%), Positives = 124/260 (47%), Gaps = 17/260 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K+F GKV +VT +   IGL  A RL  EG ++ +    ++ ++KA   ++  G+E    +
Sbjct: 1   KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYV 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           C V++E+     +D  V  +G+ID    NA      A +         ++  INV  +  
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFH 120

Query: 128 LMQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           +++  +  M   +   +V  +S+AG + P  MA YG +K A++ LT+  A ++AP   RV
Sbjct: 121 VLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRV 180

Query: 185 NCVAPGFVPTHFAQALLGN--------------DAVRKALEGKTLLNRLGTTGNMAAAIA 230
           N ++PG++   F                       V + + G   + R G    +   +A
Sbjct: 181 NAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA 240

Query: 231 FLASDDASYITGETLVVAGG 250
           FL  DD+S++TG  L +AGG
Sbjct: 241 FLLGDDSSFMTGVNLPIAGG 260

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  182 bits (463), Expect = 6e-58
 Identities = 59/247 (23%), Positives = 109/247 (44%), Gaps = 13/247 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
            F G  A+VT + +GIG    + L   GA VV  +R   ++    ++       +  +  
Sbjct: 2   NFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG----IEPVCV 57

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            + +     +  +K +   G +D+ V NAA+       L+  +   D+ + +N++S   +
Sbjct: 58  DLGDW----DATEKALGGIGPVDLLVNNAALVIMQ-PFLEVTKEAFDRSFSVNLRSVFQV 112

Query: 129 MQDAAPHMQKGSS---VVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            Q  A  M        +V +SS+  +     +  Y  TK A+  LTKA+A E+ P   RV
Sbjct: 113 SQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRV 172

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N V P  V T   + +  +    + L+ +  L +     ++  +I FL SD ++  +G  
Sbjct: 173 NSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGGG 232

Query: 245 LVVAGGM 251
           ++V  G 
Sbjct: 233 ILVDAGY 239

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  183 bits (465), Expect = 7e-58
 Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 9/251 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R Q KVA++T    GIG   A+     GA VVI+     +  K    + +  + +  + C
Sbjct: 3   RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDV-ISFVHC 61

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYA-ADLLKTKESVLDKLWEINVKSSIL 127
            V+ ++  +NL+D T+ K+G++D+   N  V       +L+       ++ +INV  + L
Sbjct: 62  DVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFL 121

Query: 128 LMQDAAPH--MQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAPDT-R 183
           + + AA      K  S+VF +SI+ +        +Y  TK A+LGLT +L  E+     R
Sbjct: 122 VAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIR 181

Query: 184 VNCVAPGFVPTHFAQALLGNDAVRK---ALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           VNCV+P  V +     + G D+ R    A +   L   L    ++A A+A+LA D++ Y+
Sbjct: 182 VNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV 241

Query: 241 TGETLVVAGGM 251
           +G  LV+ GG 
Sbjct: 242 SGLNLVIDGGY 252

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  182 bits (463), Expect = 9e-58
 Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 6/250 (2%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T +  GIG  +A      GASVV+S       +  V++++ LG +     C
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC 67

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +++EQ    L D  + K G++D+ V NA              +   + +E+NV S   L
Sbjct: 68  DITSEQELSALADFAISKLGKVDILVNNAGGGG--PKPFDMPMADFRRAYELNVFSFFHL 125

Query: 129 MQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVN 185
            Q  AP M    G  ++ I+S+A       M  Y  +K A   L + +A ++     RVN
Sbjct: 126 SQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVN 185

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            +APG + T   ++++    + + +   T + RLG   ++A A  FL S  AS+++G+ L
Sbjct: 186 GIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAASWVSGQIL 244

Query: 246 VVAGGMASRL 255
            V+GG    L
Sbjct: 245 TVSGGGVQEL 254

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  182 bits (462), Expect = 1e-57
 Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 6/247 (2%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEVIGIIC 68
            +G+VA+VT  ++G+G G+A+ L   G SVV++SR  +   +A +KL +  G+E +   C
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRC 62

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VSN +  K L++   EK+G++D  V  A +N       +       ++ E+N+  +  +
Sbjct: 63  DVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRH-PAEEFPLDEFRQVIEVNLFGTYYV 121

Query: 129 MQDAAPH---MQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRV 184
            ++A          S +   S          ++ Y  +K  +  LTKALA E      RV
Sbjct: 122 CREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV 181

Query: 185 NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET 244
           N +APG+  T   +A+  +      +  +  L R G   ++     FLAS++A Y+TG+ 
Sbjct: 182 NVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQI 241

Query: 245 LVVAGGM 251
           + V GG 
Sbjct: 242 IFVDGGW 248

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  182 bits (463), Expect = 2e-57
 Identities = 69/258 (26%), Positives = 116/258 (44%), Gaps = 15/258 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE---VIG 65
           RF GK  ++T S+ GIG   A     EGA V I+ R +  +++  +++   G+    +  
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 60

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADL-LKTKESVLDKLWEINVKS 124
           ++  V+    + ++I+ T+ K+G+ID+ V NA  N             +  K +++N ++
Sbjct: 61  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 120

Query: 125 SILLMQDAAPHMQKGSSVVF--ISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
            I + Q    H+ K    +    S +AG Q  S    Y   K AL   T+  A ++    
Sbjct: 121 VIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHG 180

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALE-------GKTLLNRLGTTGNMAAAIAFLAS 234
            RVN V+PG V T F  A+   +     L            +   G    +A  I FLA 
Sbjct: 181 VRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD 240

Query: 235 DD-ASYITGETLVVAGGM 251
            + +SYI G+++V  GG 
Sbjct: 241 RNLSSYIIGQSIVADGGS 258

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  180 bits (457), Expect = 7e-57
 Identities = 64/259 (24%), Positives = 97/259 (37%), Gaps = 15/259 (5%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-KALGIEV 63
                F  K  +VT   +GIGL     +   GA+V +  R   +  +  EK+ K  G++ 
Sbjct: 2   GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKT 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVK 123
               C VSN       I +     G I   + NA V+       +        ++++NV 
Sbjct: 62  KAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVVK-PATELTHEDFAFVYDVNVF 120

Query: 124 SSILLMQDAAPHM---QKGSSVVFIS-------SIAGYQPPSAMAMYGVTKTALLGLTKA 173
                 +  A      Q+  S+V  S       + +          Y  +K A   L K 
Sbjct: 121 GVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKG 180

Query: 174 LAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFL 232
           LAAE A    RVN ++PG+V T     +  +  +R        LNR      M      L
Sbjct: 181 LAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAILL 238

Query: 233 ASDDASYITGETLVVAGGM 251
            SD A+Y+TG    + GG 
Sbjct: 239 LSDHATYMTGGEYFIDGGQ 257

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  180 bits (457), Expect = 7e-57
 Identities = 72/252 (28%), Positives = 118/252 (46%), Gaps = 9/252 (3%)

Query: 9   RF--QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
           R+  +G  A+VT  ++GIG  + E L   GA V   SR +K +D+ +E  +  G+ V G 
Sbjct: 1   RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGS 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
           +C + +   R  L+      +      ++N A      +     E   + +   N +++ 
Sbjct: 61  VCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAY 120

Query: 127 LLMQ--DAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-R 183
            L Q         +  +V+F+SSIAG+    ++++Y  +K A+  +TK+LA E A D  R
Sbjct: 121 HLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIR 180

Query: 184 VNCVAPGFVPTHFAQALL----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           VN VAPG + T   +  +               KT + R G    ++A IAFL    ASY
Sbjct: 181 VNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASY 240

Query: 240 ITGETLVVAGGM 251
           ITG+ +   GG 
Sbjct: 241 ITGQIIWADGGF 252

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (455), Expect = 9e-57
 Identities = 68/250 (27%), Positives = 112/250 (44%), Gaps = 13/250 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIG 65
           M     G+  +VT + +GIG G  + L   GA VV  SR Q ++D  V +       +  
Sbjct: 1   MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG----IEP 56

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           +   + + +      ++ +   G +D+ V N A        L+  +   D+ +E+N+++ 
Sbjct: 57  VCVDLGDWE----ATERALGSVGPVDLLV-NNAAVALLQPFLEVTKEAFDRSFEVNLRAV 111

Query: 126 ILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
           I + Q  A  +       ++V +SS    +  +  ++Y  TK AL  LTK +A E+ P  
Sbjct: 112 IQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN V P  V T   QA   +    K +  +  L +     ++  AI FL SD +   T
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT 231

Query: 242 GETLVVAGGM 251
           G TL V GG 
Sbjct: 232 GSTLPVEGGF 241

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  179 bits (455), Expect = 2e-56
 Identities = 70/257 (27%), Positives = 121/257 (47%), Gaps = 15/257 (5%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGI 66
           K   GKVA+ T + +GIG G+A  LG  GASVV++     K  ++ V +LK LG + + I
Sbjct: 2   KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAI 61

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              +S       L DK V  +G +D  + N+ +  +  D L+  + + DK++ +N +   
Sbjct: 62  QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW-CDELEVTQELFDKVFNLNTRGQF 120

Query: 127 LLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAPDT-RV 184
            + Q    H ++G  ++  SSIA         A+Y  +K A+ G  +A A +       V
Sbjct: 121 FVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTV 180

Query: 185 NCVAPGFVPTHFAQALLG-----------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLA 233
           NC+APG V T                    + + + L     L R+G   ++  A++ L 
Sbjct: 181 NCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC 240

Query: 234 SDDASYITGETLVVAGG 250
            +++ +I G+ + + GG
Sbjct: 241 QEESEWINGQVIKLTGG 257

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  179 bits (454), Expect = 2e-56
 Identities = 69/248 (27%), Positives = 106/248 (42%), Gaps = 10/248 (4%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
             GK  ++T   +G+G   A +    GA VV++       ++     + LG         
Sbjct: 3   LSGKTVIITGGARGLGAEAARQAVAAGARVVLADV---LDEEGAATARELGDAARYQHLD 59

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+ E+  + ++    E++G +D  V N A       L         K+ EIN+    + M
Sbjct: 60  VTIEEDWQRVVAYAREEFGSVDGLV-NNAGISTGMFLETESVERFRKVVEINLTGVFIGM 118

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           +   P M    G S+V ISS AG    +  + YG +K  + GL+K  A E+  D  RVN 
Sbjct: 119 KTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNS 178

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTT-GNMAAAIAFLASDDASYITGETL 245
           V PG   T             +     T + R+G   G +A A+  L SD +SY+TG  L
Sbjct: 179 VHPGMTYTPMTAET--GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAEL 236

Query: 246 VVAGGMAS 253
            V GG  +
Sbjct: 237 AVDGGWTT 244

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  178 bits (452), Expect = 3e-56
 Identities = 63/245 (25%), Positives = 110/245 (44%), Gaps = 10/245 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R + K  ++T +  GIG    E    EGA +V    ++  + +A E + A       ++ 
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGA-----HPVVM 56

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V++    +    + +   GR+D  V  A +        K      + +  +N+  S L+
Sbjct: 57  DVADPASVERGFAEALAHLGRLDGVVHYAGITRDN-FHWKMPLEDWELVLRVNLTGSFLV 115

Query: 129 MQDAAPHMQKGSSVVFI-SSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
            + A+  M++ +    + ++   Y      A Y  +   ++GLT+ LA E+     RVN 
Sbjct: 116 AKAASEAMREKNPGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNT 175

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           +APGF+ T     +   + VR+     T L R G    +A A  FL SD++S+ITG+ L 
Sbjct: 176 LAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQVLF 233

Query: 247 VAGGM 251
           V GG 
Sbjct: 234 VDGGR 238

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  178 bits (452), Expect = 5e-56
 Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 15/255 (5%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            +VA+VT +T GIGL +A RLG EG  V + +R ++ +   +++L+  G+E  G  C V 
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           +    + L+   VE+YG +DV V NA   P      +  + +   + E N+     + + 
Sbjct: 62  SVPEIEALVAAVVERYGPVDVLVNNAG-RPGGGATAELADELWLDVVETNLTGVFRVTKQ 120

Query: 132 AAPHM----QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
                    +    +V I+S  G Q     A Y  +K  ++G TKAL  E+A     VN 
Sbjct: 121 VLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNA 180

Query: 187 VAPGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           V PGFV T  A ++  +         +     +  +  + R      +A  +A+L    A
Sbjct: 181 VCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA 240

Query: 238 SYITGETLVVAGGMA 252
           + +T + L V GG+ 
Sbjct: 241 AAVTAQALNVCGGLG 255

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (454), Expect = 7e-56
 Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 10/256 (3%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-----LG 60
                QG+VA+VT    GIG  + + L   G++VVI+SRK + +  A ++L+A       
Sbjct: 6   APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQ 65

Query: 61  IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEI 120
             VI I C++ NE+   NL+  T++ +G+I+  V N       +            + E 
Sbjct: 66  ARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLET 124

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMA 179
           N+  +  + +       K      ++ I   +         G  +  +  LTK+LA E A
Sbjct: 125 NLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWA 184

Query: 180 PDT-RVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD 236
               R+NCVAPG + +  A    G    +  +    K    R+G    +++ + FL S  
Sbjct: 185 CSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPA 244

Query: 237 ASYITGETLVVAGGMA 252
           AS+ITG+++ V GG +
Sbjct: 245 ASFITGQSVDVDGGRS 260

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  174 bits (443), Expect = 9e-55
 Identities = 74/251 (29%), Positives = 126/251 (50%), Gaps = 6/251 (2%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVI 64
           M K  +GKV V+T S+ G+G  +A R   E A VV++ R K+   +  +E++K +G E I
Sbjct: 1   MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAI 60

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +   V+ E    NL+   ++++G++DV + NA +    +   +   S  +K+ + N+  
Sbjct: 61  AVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENPVSSH-EMSLSDWNKVIDTNLTG 119

Query: 125 SILLMQDAAPHM---QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
           + L  ++A  +        +V+ +SS+    P      Y  +K  +  +T+ LA E AP 
Sbjct: 120 AFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPK 179

Query: 182 T-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
             RVN + PG + T        +   R  +E    +  +G    +AA  A+LAS +ASY+
Sbjct: 180 GIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV 239

Query: 241 TGETLVVAGGM 251
           TG TL   GGM
Sbjct: 240 TGITLFADGGM 250

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  174 bits (441), Expect = 2e-54
 Identities = 65/255 (25%), Positives = 111/255 (43%), Gaps = 11/255 (4%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL--KALGIEVIGI 66
           RF  +V ++T    G+G   A RL  EGA + +     + ++ +   +   A   EV+  
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTT 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
           +  VS+E   +  +  T E++GRID F  NA +            +  DK+  IN++   
Sbjct: 61  VADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVF 120

Query: 127 LLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TR 183
           L ++     M++     VV  +S+ G +     + Y   K  ++GLT+  A E      R
Sbjct: 121 LGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIR 180

Query: 184 VNCVAPGFVPTHFAQALLGN------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA 237
           +N +APG + T   +  +            +         R G    +AA +AFL SDDA
Sbjct: 181 INAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA 240

Query: 238 SYITGETLVVAGGMA 252
           SY+    + + GG +
Sbjct: 241 SYVNATVVPIDGGQS 255

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  174 bits (441), Expect = 6e-54
 Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 6/257 (2%)

Query: 1   MEKVNMA-KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA- 58
           ++K  +    FQGKVA +T    G+G G+   L   GA  VI+SRK   +    E++ + 
Sbjct: 13  LQKAMLPPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ 72

Query: 59  LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLW 118
            G +V  I C V +    +N + + ++  G  ++ + NAA N  +     +  +      
Sbjct: 73  TGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITD 132

Query: 119 EINVKSSILLMQDAAPHMQKGSSVVFI--SSIAGYQPPSAMAMYGVTKTALLGLTKALAA 176
            +   ++ + ++     ++      F+  ++I        +      K  +  ++K+LAA
Sbjct: 133 IVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAA 192

Query: 177 EMAPD-TRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS 234
           E      R N + PG + T  A + L       K + G+    RLGT   +A   AFL S
Sbjct: 193 EWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCS 252

Query: 235 DDASYITGETLVVAGGM 251
           D AS+I G  +   GG 
Sbjct: 253 DYASWINGAVIKFDGGE 269

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  171 bits (435), Expect = 1e-53
 Identities = 70/244 (28%), Positives = 118/244 (48%), Gaps = 8/244 (3%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK  +VT +  GIG    +    EGAS+V   R+++ + +AV    AL  E I ++ 
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAV---AALEAEAIAVVA 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            VS+ +  + +  + +E++GR+     + A   ++A          +K+  +N+  S L+
Sbjct: 59  DVSDPKAVEAVFAEALEEFGRLHGVA-HFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 129 MQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCV 187
            + A   +++G S+V   S+AG         Y   K  ++GL + LA E+A    RVN +
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVAGLGAFGLAH-YAAGKLGVVGLARTLALELARKGVRVNVL 176

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
            PG + T     L       +   G + L R G    +A A  FL S++++YITG+ L V
Sbjct: 177 LPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV 234

Query: 248 AGGM 251
            GG 
Sbjct: 235 DGGR 238

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  172 bits (436), Expect = 4e-53
 Identities = 51/256 (19%), Positives = 93/256 (36%), Gaps = 23/256 (8%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ------KNVDKAVEKLKALGIE 62
           RF G+V +VT +  G+G   A      GA VV++          K    A + ++ +   
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR 63

Query: 63  VIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINV 122
               + +  + +  + L+   ++ +GRIDV V NA +        +  +   D +  +++
Sbjct: 64  GGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHL 122

Query: 123 KSSILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           + S  + + A  HM  Q    ++  +S +G       A Y   K  LLGL   L  E   
Sbjct: 123 RGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK 182

Query: 181 DT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           +    N +AP          +               L        +A  + +L   ++  
Sbjct: 183 NNIHCNTIAPNAGSRMTETVM------------PEDLVEALKPEYVAPLVLWLCH-ESCE 229

Query: 240 ITGETLVVAGGMASRL 255
             G    V  G   +L
Sbjct: 230 ENGGLFEVGAGWIGKL 245

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  171 bits (434), Expect = 4e-53
 Identities = 58/260 (22%), Positives = 119/260 (45%), Gaps = 15/260 (5%)

Query: 6   MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS-RKQKNVDKAVEKLKALGIEVI 64
            +   +GKVA+VT + +GIG  +A  LG  G  V+++     ++ ++ V  +K  G +  
Sbjct: 12  QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAA 71

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
            +  +V   +    + ++ V+ +G++D+ V + +       +        D+++ IN + 
Sbjct: 72  CVKANVGVVEDIVRMFEEAVKIFGKLDI-VCSNSGVVSFGHVKDVTPEEFDRVFTINTRG 130

Query: 125 SILLMQDAAPHMQK-GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
              + ++A  H++  G  ++  S     +     A+Y  +K A+    + +A +MA    
Sbjct: 131 QFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 190

Query: 183 RVNCVAPGFVPTHFAQALLGN-----------DAVRKALEGKTLLNRLGTTGNMAAAIAF 231
            VN VAPG + T    A+              +    A    + L R+G   ++A  + F
Sbjct: 191 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF 250

Query: 232 LASDDASYITGETLVVAGGM 251
           LAS+D  ++TG+ + + GG 
Sbjct: 251 LASNDGGWVTGKVIGIDGGA 270

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  169 bits (430), Expect = 6e-53
 Identities = 78/245 (31%), Positives = 130/245 (53%), Gaps = 9/245 (3%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F+GK+A+VT +++GIG  +AE L   GA V+ ++  +       +    LG    G++ +
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDY---LGANGKGLMLN 58

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++    +++++K   ++G +D  ++N A       L++ K+   + + E N+ S   L 
Sbjct: 59  VTDPASIESVLEKIRAEFGEVD-ILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           +     M  ++   ++ I S+ G       A Y   K  L+G +K+LA E+A     VN 
Sbjct: 118 KAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNV 177

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           VAPGF+ T   +A   +D  R  +  +    RLG    +A A+AFLASD+A+YITGETL 
Sbjct: 178 VAPGFIETDMTRA--LSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLH 235

Query: 247 VAGGM 251
           V GGM
Sbjct: 236 VNGGM 240

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  167 bits (425), Expect = 4e-52
 Identities = 58/246 (23%), Positives = 93/246 (37%), Gaps = 15/246 (6%)

Query: 15  AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ 74
           A+VT      G+G A RL   G +V       K      ++L+A             +EQ
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHTVACHDESFK----QKDELEAFA--ETYPQLKPMSEQ 56

Query: 75  HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAP 134
               LI+     YG++DV V N    P    + K          E        L+   A 
Sbjct: 57  EPAELIEAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 135 HMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVAPGF 191
            M+  K   ++FI+S   + P   ++ Y   +     L  AL+ E+      V  + P +
Sbjct: 117 QMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNY 176

Query: 192 VPTHFAQALLGNDA------VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
           + +  +      +           ++  T L RLGT   +   +AFLAS    Y+TG+  
Sbjct: 177 LHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQVF 236

Query: 246 VVAGGM 251
            +AGG 
Sbjct: 237 WLAGGF 242

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 6e-52
 Identities = 66/260 (25%), Positives = 114/260 (43%), Gaps = 27/260 (10%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL--KALGIEVIGIICH 69
           GKVA+VT + QGIG   AE L L+GA V +     +   +    L  +    + + I C 
Sbjct: 3   GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCD 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V+++Q  ++   K V+ +GR+D+ V NA VN              +K  +IN+ S I   
Sbjct: 63  VADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN---------WEKTLQINLVSVISGT 113

Query: 130 QDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTK--ALAAEMAPD- 181
                +M K     G  ++ +SS+AG  P +   +Y  +K  ++G T+  ALAA +    
Sbjct: 114 YLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSG 173

Query: 182 TRVNCVAPGFVPTHFAQALLGNDA------VRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            R+N + PGFV T   +++   +        +  ++       +     +A  +  L  D
Sbjct: 174 VRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLIED 233

Query: 236 DASYITGETLVVAGGMASRL 255
           DA  + G  + +        
Sbjct: 234 DA--LNGAIMKITTSKGIHF 251

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  166 bits (422), Expect = 1e-51
 Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 7/252 (2%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEV 63
           +     GK A+V    + + +G  +A +L   GA V +S + ++   +A +  +ALG  +
Sbjct: 2   LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 64  IGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVN---PYAADLLKTKESVLDKLWEI 120
           +     V+ ++    L     E +G +D  V   A           + T+        E+
Sbjct: 62  L-FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEV 120

Query: 121 NVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP 180
           +  S + + + A P +++G  +V ++  A  +      +  + K AL    + LA E+ P
Sbjct: 121 SAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180

Query: 181 D-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
              RVN ++ G V T  A+++ G   +   +     L R  T   +     FL S  AS 
Sbjct: 181 KGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLASG 240

Query: 240 ITGETLVVAGGM 251
           ITGE + V  G 
Sbjct: 241 ITGEVVYVDAGY 252

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  165 bits (419), Expect = 4e-51
 Identities = 67/256 (26%), Positives = 116/256 (45%), Gaps = 17/256 (6%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GK A++T S +GIG   AE    EGA V I+     N++ A      +G     I  
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGARVAIADI---NLEAARATAAEIGPAACAIAL 58

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+++      + + ++++G ID+ V NAA+   A  + +      D+L+ INV  ++ +
Sbjct: 59  DVTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIV-EITRESYDRLFAINVSGTLFM 117

Query: 129 MQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           MQ  A  M     G  ++ ++S AG +  + + +Y  TK A++ LT++    +      V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 185 NCVAPGFVPTHFAQAL---------LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
           N +APG V       +         L     ++ +       R+G   ++     FLA+ 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLATP 237

Query: 236 DASYITGETLVVAGGM 251
           +A YI  +T  V GG 
Sbjct: 238 EADYIVAQTYNVDGGN 253

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 5e-51
 Identities = 58/245 (23%), Positives = 107/245 (43%), Gaps = 9/245 (3%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           K   G++ ++T +  GIG   A       + +V+    +  +++   K K LG +V   +
Sbjct: 3   KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 62

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
              SN +   +   K   + G + + V N A   Y +DL  T++  ++K +E+NV +   
Sbjct: 63  VDCSNREDIYSSAKKVKAEIGDVSILV-NNAGVVYTSDLFATQDPQIEKTFEVNVLAHFW 121

Query: 128 LMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT--- 182
             +   P M       +V ++S AG+     +  Y  +K A +G  K L  E+A      
Sbjct: 122 TTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITG 181

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            +  C+ P FV T F +    + ++   LE + ++NRL         + F+ S  A   T
Sbjct: 182 VKTTCLCPNFVNTGFIKN--PSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAFLTT 239

Query: 242 GETLV 246
            E ++
Sbjct: 240 LERIL 244

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  164 bits (417), Expect = 6e-51
 Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 14/250 (5%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GKVA+V+   +G+G      +  EGA VV      +       +   L      +  
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE---LADAARYVHL 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            V+     K  +D  V  +G + V V NA +            +   ++ ++N+    L 
Sbjct: 60  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIGTI-EDYALTEWQRILDVNLTGVFLG 118

Query: 129 MQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
           ++     M++    S++ ISSI G     A   Y  TK A+ GLTK+ A E+ P   RVN
Sbjct: 119 IRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVN 178

Query: 186 CVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL 245
            + PG V T     +            +T L R      ++  + +LASD++SY TG   
Sbjct: 179 SIHPGLVKTPMTDWV-------PEDIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAEF 231

Query: 246 VVAGGMASRL 255
           VV GG  + L
Sbjct: 232 VVDGGTVAGL 241

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  162 bits (411), Expect = 6e-50
 Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 16/259 (6%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKA-LGIEVIGIIC 68
           +GKVAVVT ST GIGLG+A  L  +GA +V++       ++K    L A  G++V+    
Sbjct: 3   KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGA 62

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
            +S  +  + L+D  V + GRID+ V N A   + A +        D +  +N+ +    
Sbjct: 63  DLSKGEAVRGLVDNAVRQMGRIDILV-NNAGIQHTALIEDFPTEKWDAILALNLSAVFHG 121

Query: 129 MQDAAPHMQKGS--SVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVN 185
              A PHM+K     ++ I+S  G    +  + Y   K  ++G TK  A E A      N
Sbjct: 122 TAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN 181

Query: 186 CVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASD 235
            + PG+V T   +  +             A R+ L  K    +  T   +     FLASD
Sbjct: 182 AICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLASD 241

Query: 236 DASYITGETLVVAGGMASR 254
            A+ ITG T+ V GG  +R
Sbjct: 242 AAAQITGTTVSVDGGWTAR 260

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  161 bits (408), Expect = 1e-49
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 8/245 (3%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            V VVT +++GIG  +A  LG  G  V+++ +R  K  ++  ++++A G + I     VS
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            E   + ++   ++ +G IDV V NA +      + + K+S  D++ ++N+    L  Q 
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGITRDTLLI-RMKKSQWDEVIDLNLTGVFLCTQA 120

Query: 132 AAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNCVA 188
           A   M  ++   ++ I+S+ G       A Y   K  ++G +K  A E A     VN V 
Sbjct: 121 ATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVC 180

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA-SDDASYITGETLVV 247
           PGF+ +     L   + + K + G   L R G   N+A  + FLA S  ASYITG+   +
Sbjct: 181 PGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI 238

Query: 248 AGGMA 252
            GG+A
Sbjct: 239 DGGIA 243

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  159 bits (403), Expect = 5e-49
 Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 17/245 (6%)

Query: 10  FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
           F  +  +VT   +GIGL +A+RL  +G  V ++ R                  + G+   
Sbjct: 5   FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-----------GLFGVEVD 53

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
           V++            E  G ++V V + A     A L++  E   +K+   N+  +  + 
Sbjct: 54  VTDSDAVDRAFTAVEEHQGPVEVLV-SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVA 112

Query: 130 QDAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNC 186
           Q A+      K   ++FI S++G       A Y  +K  ++G+ +++A E++      N 
Sbjct: 113 QRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANV 172

Query: 187 VAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV 246
           VAPG++ T   +AL  ++ +++         R+GT   +A  ++FLAS+DASYI+G  + 
Sbjct: 173 VAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVIP 230

Query: 247 VAGGM 251
           V GGM
Sbjct: 231 VDGGM 235

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  159 bits (402), Expect = 8e-49
 Identities = 70/245 (28%), Positives = 119/245 (48%), Gaps = 20/245 (8%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + K  +V A+++GIG  VA+ L  EGA V I +R +       E LK  G   +  +C +
Sbjct: 3   RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNE-------ELLKRSGHRYV--VCDL 53

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
             +      +D   EK   +D+ V   A  P A    +       +  +    + I +++
Sbjct: 54  RKD------LDLLFEKVKEVDILV-LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVR 106

Query: 131 DAAPH--MQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCV 187
           +  P    +    +V I+S +   P   +      + AL G  K L+ E+AP    VNCV
Sbjct: 107 NYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCV 166

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
           APG+  T   + LL ++  +K +E +  + R+     +A+ +AFL S+ ASY+TG+T+VV
Sbjct: 167 APGWTETERVKELL-SEEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIVV 225

Query: 248 AGGMA 252
            GG++
Sbjct: 226 DGGLS 230

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (399), Expect = 3e-48
 Identities = 69/251 (27%), Positives = 113/251 (45%), Gaps = 18/251 (7%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIIC 68
           R  GKV ++TA+ QGIG   A     EGA V+ +     N  K  E  K  GI+   +  
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDI---NESKLQELEKYPGIQTRVLDV 59

Query: 69  HVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILL 128
               +  +     + ++        + N A   +   +L  +E   D    +NV+S  L+
Sbjct: 60  TKKKQIDQFANEVERLD-------VLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLM 112

Query: 129 MQDAAPHM--QKGSSVVFISSIAG-YQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RV 184
           ++   P M  QK  +++ +SS+A   +      +Y  TK A++GLTK++AA+      R 
Sbjct: 113 IKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRC 172

Query: 185 NCVAPGFVPTHFAQALLGNDA----VRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
           NCV PG V T   Q  +         R     +    R  T   +A    +LASD+++Y+
Sbjct: 173 NCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESAYV 232

Query: 241 TGETLVVAGGM 251
           TG  +++ GG 
Sbjct: 233 TGNPVIIDGGW 243

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  157 bits (398), Expect = 5e-48
 Identities = 72/252 (28%), Positives = 117/252 (46%), Gaps = 14/252 (5%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           KVA+VT + QGIG  +A RL  +G +V I+            ++   G   + +   VS+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSD 61

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDA 132
                  +++  +  G  DV V NA V P    +      ++DK++ INVK  I  +Q A
Sbjct: 62  RDQVFAAVEQARKTLGGFDVIVNNAGVAPS-TPIESITPEIVDKVYNINVKGVIWGIQAA 120

Query: 133 APHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVA 188
               +K   G  ++   S AG+     +A+Y  +K A+ GLT+  A ++AP    VN   
Sbjct: 121 VEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYC 180

Query: 189 PGFVPTHFAQALLGN---------DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY 239
           PG V T     +                     +  L RL    ++AA +++LAS D+ Y
Sbjct: 181 PGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY 240

Query: 240 ITGETLVVAGGM 251
           +TG++L++ GGM
Sbjct: 241 MTGQSLLIDGGM 252

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  156 bits (395), Expect = 2e-47
 Identities = 38/255 (14%), Positives = 75/255 (29%), Gaps = 20/255 (7%)

Query: 9   RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE-KLKALGIEVIGII 67
               K  +  A+  GIGL  +  L        +   + +N     E K     + +    
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 68  CHVSN-EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
             V+      K L+ K  ++   +D+ +  A +              +++   IN    +
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ---------IERTIAINFTGLV 112

Query: 127 LLMQDAAPHMQ-----KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
                            G  +  I S+ G+     + +Y  +K A++  T +LA      
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 182 -TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI 240
                 + PG   T           V   +  + LL+    T          A +  +  
Sbjct: 173 GVTAYSINPGITRTPLVHTFNSWLDVEPRVA-ELLLSHPTQTSEQCGQNFVKAIE--ANK 229

Query: 241 TGETLVVAGGMASRL 255
            G    +  G    +
Sbjct: 230 NGAIWKLDLGTLEAI 244

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  154 bits (389), Expect = 9e-47
 Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 8/250 (3%)

Query: 9   RFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
              GK  +VT  AS   I  G+A+ +  EGA +  + +  K +   VE+  A     I +
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVL 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWE----INV 122
            C V+ +     +  +  + + + D FV +    P          +V  + ++    I+ 
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 123 KSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT 182
            S + + +     +  GS+++ +S +   +      + G+ K +L    + +A  M P+ 
Sbjct: 121 YSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEG 180

Query: 183 -RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RVN ++ G + T  A  +     +    E  T + R  T  ++  + AFL SD ++ I+
Sbjct: 181 VRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGIS 240

Query: 242 GETLVVAGGM 251
           GE + V GG 
Sbjct: 241 GEVVHVDGGF 250

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  146 bits (368), Expect = 1e-43
 Identities = 51/251 (20%), Positives = 93/251 (37%), Gaps = 24/251 (9%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGAS-------VVISSRKQKNVDKAVEKLKALGIEVIG 65
            + ++T + +GIG  +A                +V+SSR   +++K   + +A G     
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSS 125
           I   +S+    + L    VE+YG ID  V N A       L    E   D     N+K +
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLV-NNAGVGRFGALSDLTEEDFDYTMNTNLKGT 120

Query: 126 ILLMQDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT- 182
             L Q     M  Q    + FI+S+A  +     ++Y ++K    GL + +         
Sbjct: 121 FFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNV 180

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           R+  V PG V T     +              +   +    ++AA +       +  +  
Sbjct: 181 RITDVQPGAVYTPMWGKV-----------DDEMQALMMMPEDIAAPVVQAYLQPSRTVVE 229

Query: 243 ETLV--VAGGM 251
           E ++   +G +
Sbjct: 230 EIILRPTSGDI 240

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  142 bits (359), Expect = 4e-42
 Identities = 57/260 (21%), Positives = 101/260 (38%), Gaps = 20/260 (7%)

Query: 7   AKRFQGKVAVVTASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKA--LGI 61
           A      V V+T +++G G  +A +L      G+ +++S+R +  + +  E+L A    +
Sbjct: 1   ADGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDL 60

Query: 62  EVIGIICHVSNEQHRKNLIDKTVE----KYGRIDVFVLNAAVNPYA--ADLLKTKESVLD 115
           +V+     +  E   + L+    E    +  +  + + NAA         L     + ++
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 116 KLWEINVKSSILLMQDAAPHMQK----GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLT 171
             W +N+ S + L        Q       +VV ISS+   QP     +Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 172 KALAAEMAPDTRVNCVAPGFVPTHFAQALL---GNDAVRKALEGKTLLNRLGTTGNMAAA 228
           + LAAE  P  RV   APG +     Q       +  +R  L+       L   G  A  
Sbjct: 181 QVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQK 239

Query: 229 IAFLASDDASYITGETLVVA 248
           +  L   D ++ +G  +   
Sbjct: 240 LLGLLQKD-TFQSGAHVDFY 258

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  140 bits (354), Expect = 2e-41
 Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 27/262 (10%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV--EKLKALGIEVIGIICHVS 71
            AV+T   + IG  +A RL  +G  VV+  R  +   + +  E   A     +     +S
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 72  NEQHR----KNLIDKTVEKYGRIDVFVLNAAVNPYA----------ADLLKTKESVLDKL 117
                    +++ID +   +GR DV V NA+               A   K  ++ + +L
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 118 WEINVKSSILLMQDAAPHMQKGSS-------VVFISSIAGYQPPSAMAMYGVTKTALLGL 170
           +  N  + + L++  A    +G +       VV +       P     +Y + K AL GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 171 TKALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI 229
           T+A A E+AP   RVN VAPG      A      +  R+ +    L     +   +A AI
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEEYRRKV---PLGQSEASAAQIADAI 239

Query: 230 AFLASDDASYITGETLVVAGGM 251
           AFL S DA YITG TL V GG+
Sbjct: 240 AFLVSKDAGYITGTTLKVDGGL 261

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  139 bits (352), Expect = 2e-41
 Identities = 50/250 (20%), Positives = 91/250 (36%), Gaps = 26/250 (10%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           + A+VT    G+G   A  L   G  VV+   +++            G ++I +   V+ 
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYRVVVLDLRRE------------GEDLIYVEGDVTR 49

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLN--AAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
           E+  +  + +  E+     V                         ++ E+N+  +  +++
Sbjct: 50  EEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLR 109

Query: 131 DAAPHM--------QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD- 181
            AA  M         +   +V  +S+A ++     A Y  +K  ++ LT   A E+A   
Sbjct: 110 LAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWG 169

Query: 182 TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT 241
            RV  VAPG   T   Q  L   A            RLG     AA +  +  +    + 
Sbjct: 170 IRVVTVAPGLFDTPLLQG-LPEKAKASLAAQVPFPPRLGRPEEYAALVLHILEN--PMLN 226

Query: 242 GETLVVAGGM 251
           GE + + G +
Sbjct: 227 GEVVRLDGAL 236

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  138 bits (348), Expect = 2e-40
 Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 17/250 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGI 66
           +  QGK  +VT +++GIG  +A  L   GA VV+++R ++ + K V     L       I
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYI 69

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSI 126
              + +    +  + +  +  G +D+ +LN   N  + +L       + K  E+N  S +
Sbjct: 70  AGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYV 128

Query: 127 LLMQDAAPHM-QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT--- 182
           +L   A P + Q   S+V +SS+AG      +A Y  +K AL G   ++  E +      
Sbjct: 129 VLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNV 188

Query: 183 RVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFL 232
            +     G + T  A   +            +   + ++G   L +     + +     L
Sbjct: 189 SITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKG-GALRQEEVYYDSSLWTTLL 247

Query: 233 ASDDASYITG 242
             + +  I  
Sbjct: 248 IRNPSRKILE 257

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (342), Expect = 9e-40
 Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 16/252 (6%)

Query: 8   KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGII 67
           +  +G VAV+T    G+GL  AERL  +GAS V+        +   +KL    +     +
Sbjct: 1   RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADV 60

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAAD--LLKTKESVLDKLWEINVKSS 125
               + Q    L      +          A  +                 ++ ++N+  +
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 126 ILLMQDAAPHM--------QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAE 177
             +++  A  M         +   ++  +S+A ++     A Y  +K  ++G+T  +A +
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 178 MAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-LLNRLGTTGNMAAAIAFLASD 235
           +AP   RV  +APG   T    +L   + V   L  +    +RLG     A  +  +  +
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTSL--PEKVCNFLASQVPFPSRLGDPAEYAHLVQAIIEN 238

Query: 236 DASYITGETLVV 247
              ++ GE + +
Sbjct: 239 --PFLNGEVIRL 248

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (332), Expect = 2e-38
 Identities = 29/240 (12%), Positives = 70/240 (29%), Gaps = 21/240 (8%)

Query: 11  QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
           + +  +V      +G    +        V         +D    +  +  + V       
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVAS-------IDVVENEEASASVIVKMTDSFT 53

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
                    + K +    ++D  +  A          K+     D +W+ ++ +S +   
Sbjct: 54  EQADQVTAEVGK-LLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 131 DAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA---PDTRVNCV 187
            A  H+++G  +    + A       M  YG+ K A+  L ++LA + +          V
Sbjct: 113 LATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAV 172

Query: 188 APGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV 247
            P  + T   +  +               +       +        + +    +G  + V
Sbjct: 173 LPVTLDTPMNRKSMPEAD----------FSSWTPLEFLVETFHDWITGNKRPNSGSLIQV 222

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  131 bits (330), Expect = 8e-38
 Identities = 58/249 (23%), Positives = 108/249 (43%), Gaps = 7/249 (2%)

Query: 9   RFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGI 66
             +GK  ++   A+ + I  G+A+    +GA++  +   +  ++K V  +          
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVY 60

Query: 67  ICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVK 123
              VS E+H K+L +   +  G +D  V + A  P       LL+T +S  +   EI+V 
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 124 SSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-T 182
           S I L     P +  G+SV+ +S +   +  +   + G+ K AL    + LA ++     
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHI 180

Query: 183 RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG 242
           RVN ++ G + T  +  +     + K  E    L +  +   +  A  +L S  +S ++G
Sbjct: 181 RVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG 240

Query: 243 ETLVVAGGM 251
           E   V  G 
Sbjct: 241 EVHFVDAGY 249

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 4e-36
 Identities = 56/280 (20%), Positives = 97/280 (34%), Gaps = 67/280 (23%)

Query: 13  KVAVVTASTQGIGLGVAERLG-LEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
            VA+VT   +GIGL +   L  L    VV+++R       AV++L+A G+        + 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
           + Q  + L D   ++YG +DV V NA +  +            +   + N   +  +  +
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGIA-FKVADPTPFHIQAEVTMKTNFFGTRDVCTE 122

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMY------------------------------- 160
             P ++    VV +SSI   +   + +                                 
Sbjct: 123 LLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVH 182

Query: 161 ----------GVTKTALLGLTKALAAEMAPDT-----RVNCVAPGFVPTHFAQALLGNDA 205
                     GVTK  +  L++  A +++         +N   PG+V T     + G  A
Sbjct: 183 QKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRT----DMAGPKA 238

Query: 206 VRKALEGKTLLNRLGTTGNMAAAIAFLA--SDDASYITGE 243
            +   EG             A    +LA    DA    G+
Sbjct: 239 TKSPEEG-------------AETPVYLALLPPDAEGPHGQ 265

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  126 bits (316), Expect = 5e-36
 Identities = 41/243 (16%), Positives = 79/243 (32%), Gaps = 23/243 (9%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS 71
           GKV +V      +G  + E     G +V+                    I V G      
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSA-------NDQADSNILVDGNKNWTE 54

Query: 72  NEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            EQ           +  ++D     A      +   K      D + + +V SS +  + 
Sbjct: 55  QEQSILEQTAS-SLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMA---PDTRVNCVA 188
           A  H++ G  +    + A   P  +M  YG+ K A+  LT +LAA+ +    ++ V  + 
Sbjct: 114 ATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIM 173

Query: 189 PGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI-AFLASDDASYITGETLVV 247
           P  + T   +  + N             +       ++  +  +     +   +G  L +
Sbjct: 174 PVTLDTPMNRKWMPNAD----------HSSWTPLSFISEHLLKWTTETSSRPSSGALLKI 223

Query: 248 AGG 250
              
Sbjct: 224 TTE 226

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (295), Expect = 2e-32
 Identities = 46/258 (17%), Positives = 87/258 (33%), Gaps = 24/258 (9%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVI---SSRKQKNVDKAVEKLKALGIEVIGIICH 69
            V ++T  + GIGL +A RL  + +       + R  K   +  E  +AL      +   
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 70  VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLM 129
             + +  K++              ++  A       L    E  +  + ++NV  ++ ++
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRML 122

Query: 130 QDAAPHM--QKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD-TRVNC 186
           Q   P M  +    V+   S+ G        +Y  +K AL GL ++LA  + P    ++ 
Sbjct: 123 QAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSL 182

Query: 187 VAPGFVPTHFAQALLGND---------------AVRKALEGKTLLNRLGTTGNMAAAIAF 231
           +  G V T F + +LG+                    A   +           +A     
Sbjct: 183 IECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLT 242

Query: 232 LASDD---ASYITGETLV 246
                     Y T E  +
Sbjct: 243 ALRAPKPTLRYFTTERFL 260

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  115 bits (288), Expect = 9e-32
 Identities = 56/276 (20%), Positives = 93/276 (33%), Gaps = 58/276 (21%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
            + V++    GIG    + L   G  +V    +   V                 I  +S 
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEV-----------------IADLST 44

Query: 73  EQHRKNLIDKTVEKY-GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQD 131
            + RK  I   + K    +D  VL A + P        +  VL  +  +N   +  LM  
Sbjct: 45  AEGRKQAIADVLAKCSKGMDGLVLCAGLGP--------QTKVLGNVVSVNYFGATELMDA 96

Query: 132 AAPHM-----------------------------QKGSSVVFISSIAGYQPPSAMAM-YG 161
             P +                              +        +I  +       + Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 162 VTKTALLGLTKALAAEMA-PDTRVNCVAPGFVPTHFAQALLGNDAVRKAL-EGKTLLNRL 219
            +K AL    +  AA       R+N +APG   T   QA L +    +++ +    + R 
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR 216

Query: 220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMASRL 255
                MA+ IAFL S  ASY+ G  +V+ GG+ + +
Sbjct: 217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDAVM 252

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  112 bits (281), Expect = 2e-30
 Identities = 62/280 (22%), Positives = 96/280 (34%), Gaps = 46/280 (16%)

Query: 14  VAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALG------------ 60
           VA+VT + + +G  +AE L  EG +V +   R     +     L A              
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 61  ------IEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKE--- 111
                 +        V+       L+      +GR DV V NA+       L   ++   
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 112 ----------SVLDKLWEINVKSSI------LLMQDAAPHMQKGSSVVFISSIAGYQ--P 153
                     +    L+  N  +               P   +G++   I+ +      P
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 154 PSAMAMYGVTKTALLGLTKALAAEMAPDTR-VNCVAPGFVPTHFAQALLGNDAVRKALEG 212
                +Y + K AL GLT++ A E+AP    VN V PG              AV +    
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDM----PPAVWEGHRS 239

Query: 213 KT-LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
           K  L  R  +   ++  + FL S  A YITG  + V GG 
Sbjct: 240 KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  111 bits (278), Expect = 3e-30
 Identities = 40/265 (15%), Positives = 87/265 (32%), Gaps = 18/265 (6%)

Query: 9   RFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSR-KQKNVDKAVEKLKALGIEVIG 65
              GK  +V+   +   I   +A     +GA +V++   + + + +  ++L A    +  
Sbjct: 3   LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLEL 62

Query: 66  IICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP----YAADLLKTKESVLDKLWEIN 121
            + +  +       + + +    ++D  V +    P              + + K   I+
Sbjct: 63  DVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHIS 122

Query: 122 VKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
             S   + +   P M  G S+V +        P+   M                      
Sbjct: 123 AYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 182 TRVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNR-LGTTGNMAAAIA 230
            R N VA G + T    A++G             + +  + +  +   +     +A  + 
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 231 FLASDDASYITGETLVVAGGMASRL 255
            L SD     TG+ +   GG  ++L
Sbjct: 243 ALLSDWLPATTGDIIYADGGAHTQL 267

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  108 bits (269), Expect = 5e-29
 Identities = 42/211 (19%), Positives = 82/211 (38%), Gaps = 28/211 (13%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGAS--VVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
               VVT + +GIGLG+ ++L  +     ++ ++R   +V+KA E        V  +   
Sbjct: 3   PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATAR---DVEKATELKSIKDSRVHVLPLT 59

Query: 70  VSNEQHRKNLIDKTVEKYGR--IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           V+ ++     + K  E  G   + + + NA V        +   +V+ +  ++N  S +L
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVL 119

Query: 128 LMQDAAPHMQKG--------------------SSVVFISSIAGYQPPSAMAMYGVTKTAL 167
           L Q   P ++                      S +  I+          +  Y ++K A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 168 LGLTKALAAEMAPD-TRVNCVAPGFVPTHFA 197
               + LA ++  D   V    PG+V T+  
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG 210

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  104 bits (258), Expect = 4e-27
 Identities = 54/284 (19%), Positives = 94/284 (33%), Gaps = 38/284 (13%)

Query: 6   MAKRFQGKVAVVT--ASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE- 62
           +    +GK A +   A   G G  VA+ L   GA +++ +             +    + 
Sbjct: 2   LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQS 61

Query: 63  -------------------------------VIGIICHVSNEQHRKNLIDKTVEKYGRID 91
                                                  S+    +   +   + +G ID
Sbjct: 62  RVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSID 121

Query: 92  -VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG 150
            +    A     +  LL+T           +  S + L+    P M  G + + ++ IA 
Sbjct: 122 ILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIAS 181

Query: 151 YQPPSAMAM-YGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAQALLGNDAVR 207
            +            K AL   T+ LA E       RVN ++ G + +  A+A+   D + 
Sbjct: 182 ERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI 241

Query: 208 KALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM 251
           +       + +  T   +  A AFL S  AS ITG T+ V  G+
Sbjct: 242 EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  101 bits (252), Expect = 5e-26
 Identities = 47/322 (14%), Positives = 92/322 (28%), Gaps = 81/322 (25%)

Query: 11  QGKVAVVT--ASTQGIGLGVAERLGLEGASVVIS-------------------SRKQKNV 49
              +  +     T G G G+A+ L      ++                     +    + 
Sbjct: 1   NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 50  DKAVEKLKALGIEV-------------IGIICHVSNEQHRKNLIDKTVEKYGRIDVFV-L 95
           DK +  L  L  +                   ++      +++ +   +KYG+I++ V  
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 96  NAAVNPYAADLLKTKESVLDKLWEINVKSSIL-LMQDAAPHMQKGSSVVFISSIAGYQPP 154
            A       DLL T           +  S I            + S +      +    P
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP 180

Query: 155 SAMAMYGVTKTALLGLTKALAAEMAPDT--RVNCVAPGFVPTHFAQALLG---------- 202
                    K AL   T+ LA  +  +   R+N ++ G + +  A A+            
Sbjct: 181 GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN 240

Query: 203 ---------------------------------NDAVRKALEGKTLLNRLGTTGNMAAAI 229
                                             D   +  E    L +   + ++ +  
Sbjct: 241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVA 300

Query: 230 AFLASDDASYITGETLVVAGGM 251
           +FL S ++  ITG+T+ V  G+
Sbjct: 301 SFLLSRESRAITGQTIYVDNGL 322

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 47/260 (18%), Positives = 89/260 (34%), Gaps = 40/260 (15%)

Query: 13  KVAVVTASTQGIGLGVAERL---GLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICH 69
              ++T   +G+GLG+ + L         +  + R ++   K +E L      +  +   
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQA-KELEDLAKNHSNIHILEID 61

Query: 70  VSNEQH--RKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
           + N     +     + V K   ++V   NA + P +A +   +   L    + N    I+
Sbjct: 62  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIM 121

Query: 128 LMQDAAPHMQKGSSVVFIS-------------SIAGYQ---PPSAMAMYGVTKTALLGLT 171
           L +   P ++K +                   SI G         M  Y  +K+AL   T
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 172 KALAAEMAPD-TRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA 230
           K+L+ ++ P       + PG+V T    +                L+   +TG +   I+
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------------SAPLDVPTSTGQIVQTIS 228

Query: 231 FLASDDASYITGETLVVAGG 250
            L         G  +   G 
Sbjct: 229 KLGEKQ----NGGFVNYDGT 244

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 71.2 bits (173), Expect = 1e-15
 Identities = 23/184 (12%), Positives = 59/184 (32%), Gaps = 3/184 (1%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN 72
           +VA++   T  +G G+A RL   G  +V+ SR+++  +    + + +  +         +
Sbjct: 2   RVALLGG-TGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNED 60

Query: 73  EQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD-KLWEINVKSSILLMQD 131
                ++   T+     ID       +      +          K +  + + S   +  
Sbjct: 61  AAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPVSRGAKGFTYSSERSAAEIVA 120

Query: 132 AAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDT-RVNCVAPG 190
                +K  S +     A +        + V        +K +   +  +   +  +  G
Sbjct: 121 EVLESEKVVSALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAG 180

Query: 191 FVPT 194
            +  
Sbjct: 181 PLSN 184

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 60.8 bits (146), Expect = 1e-11
 Identities = 31/184 (16%), Positives = 52/184 (28%), Gaps = 5/184 (2%)

Query: 12  GKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHV 70
               +VT  T G+G  +A  L   GA  +++ SR   + D A E +  L           
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 71  SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQ 130
            +   R++ + + +   G                D      +          K       
Sbjct: 69  CDVTDRES-VRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNL 127

Query: 131 DAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPG 190
                    ++ V  SS A       +  Y      L GL +   ++  P      VA G
Sbjct: 128 HELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRRSDGLP---ATAVAWG 184

Query: 191 FVPT 194
               
Sbjct: 185 TWAG 188

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 51.0 bits (121), Expect = 1e-08
 Identities = 24/181 (13%), Positives = 46/181 (25%), Gaps = 17/181 (9%)

Query: 5   NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVI 64
                 +GK AVV A T  +G+  A  L  EGA VV+  RK      A + +      V 
Sbjct: 16  AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK-VN 74

Query: 65  GIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKS 124
                 +++  R   +                 A+           ++       I + +
Sbjct: 75  VTAAETADDASRAEAV-------KGAHFVFTAGAIGLELLP-----QAAWQNESSIEIVA 122

Query: 125 SILLMQDAAPHMQK---GSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAPD 181
                                       G      +    + +  +  L ++       +
Sbjct: 123 DYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLK-LKLHRACIAKLFESSEGVFDAE 181

Query: 182 T 182
            
Sbjct: 182 E 182

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 40.9 bits (95), Expect = 8e-05
 Identities = 35/267 (13%), Positives = 72/267 (26%), Gaps = 44/267 (16%)

Query: 13  KVAVVTASTQGIGLGVAERLGLEGASVVI-----SSRKQKNVDKAVEKLKALGIEVIGII 67
           KVA++T  T   G  +AE L  +G  V       SS   + VD   +       +     
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 68  CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSIL 127
             +S+  +   ++ +   +   +      + V         T         +++   ++ 
Sbjct: 62  GDLSDTSNLTRILREV--QPDEVYNLGAMSHVAVSFESPEYT--------ADVDAMGTLR 111

Query: 128 LMQDAAPH-MQKGSSVVFISSIAGY-----------QPPSAMAMYGVTKTALLGLTKALA 175
           L++      ++K +     S+   Y            P    + Y V K     +T    
Sbjct: 112 LLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR 171

Query: 176 AEMAPDTRV------------NCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTG 223
                                       +    A    G ++        +L +      
Sbjct: 172 ESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKD 231

Query: 224 NMAAAIAFLASDDASYITGETLVVAGG 250
            +      L  +       E  V+A G
Sbjct: 232 YVKMQWMMLQQE-----QPEDFVIATG 253

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	255
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	100.0
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.91
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.84
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.82
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.82
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.81
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.81
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.8
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.77
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.77
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.77
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.76
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.76
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.76
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.75
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.74
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.74
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.72
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.7
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.66
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.61
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.43
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.41
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.36
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.36
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.32
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.23
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.22
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.98
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	98.4
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.28
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	98.28
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	98.21
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	98.16
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	98.14
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	98.12
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	98.03
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.96
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.95
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.92
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.88
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	97.88
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.83
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.83
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.83
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.74
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.73
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	97.69
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	97.67
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.66
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.65
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	97.65
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.63
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.63
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.63
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	97.61
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	97.54
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	97.54
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	97.51
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	97.5
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.49
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.47
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	97.45
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.44
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	97.4
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	97.38
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	97.37
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	97.34
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	97.29
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	97.28
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	97.27
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	97.24
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.22
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	97.22
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	97.2
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.18
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	97.16
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	97.15
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	97.12
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	97.09
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	97.07
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	97.06
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	97.02
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.94
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.93
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	96.92
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	96.89
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	96.87
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	96.84
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.83
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	96.82
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.82
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.8
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.78
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	96.76
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	96.75
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.75
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.73
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	96.73
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.69
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	96.65
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	96.61
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.56
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.5
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	96.45
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	96.41
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	96.27
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	96.27
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	96.2
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.18
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.13
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	96.12
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.01
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	95.99
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.93
d2d59a1	139	Hypothetical protein PH1109 {Pyrococcus horikoshii	95.79
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.77
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	95.73
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.72
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	95.69
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.67
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.61
d1nv8a_	271	N5-glutamine methyltransferase, HemK {Thermotoga m	95.56
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.53
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.53
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	95.52
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.48
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	95.25
d2igta1	309	Putative methyltransferase Atu0340 {Agrobacterium	95.22
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	95.17
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	95.17
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	95.16
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.13
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	95.0
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	94.92
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	94.92
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	94.88
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	94.82
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	94.74
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	94.7
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	94.67
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	94.66
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	94.65
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	94.63
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	94.58
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.58
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	94.53
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	94.51
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	94.44
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	94.4
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	94.28
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	94.21
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	94.17
d1iuka_	136	Hypothetical protein TT1466 {Thermus thermophilus	93.96
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	93.9
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.87
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	93.86
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	93.66
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	93.62
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	93.61
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	93.37
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	93.32
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	93.3
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	93.29
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	93.27
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	93.25
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	93.04
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.01
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	92.98
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	92.91
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	92.89
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	92.81
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	92.8
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	92.74
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	92.69
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.68
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	92.44
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.29
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	92.26
d1yova1	529	Amyloid beta precursor protein-binding protein 1,	92.1
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	91.98
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	91.92
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.8
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	91.58
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	91.46
d1y81a1	116	Hypothetical protein PF0725 {Pyrococcus furiosus [	91.45
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	91.37
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.32
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.31
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	91.16
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.07
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	90.99
d1peya_	119	Sporulation response regulator Spo0F {Bacillus sub	90.99
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.89
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	90.87
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	90.79
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	90.61
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	90.44
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	90.38
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	90.25
d2b3ta1	274	N5-glutamine methyltransferase, HemK {Escherichia	90.24
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	90.05
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.99
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	89.68
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	89.39
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	89.32
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	88.99
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	88.99
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	88.78
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	88.76
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	88.4
d2b9ea1	293	NOL1R {Human (Homo sapiens) [TaxId: 9606]}	88.37
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	88.34
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	87.88
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	87.71
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	87.69
d2csua1	129	Acetate-CoA ligase alpha chain, AcdA, N-terminal d	87.48
d1wbha1	213	KDPG aldolase {Escherichia coli [TaxId: 562]}	87.36
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	87.33
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	87.33
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.31
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	87.04
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	86.99
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	86.82
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	86.79
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	86.6
d1qo0d_	189	Positive regulator of the amidase operon AmiR {Pse	86.53
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	86.45
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	86.41
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	86.31
d1c4oa2	174	Nucleotide excision repair enzyme UvrB {Thermus th	86.3
d1obba1	171	Alpha-glucosidase AglA {Thermotoga maritima [TaxId	86.18
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.14
d1pn3a_	391	TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi	86.04
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	85.99
d1v71a1	318	Hypothetical protein C320.14 (SPCC320.14, SPCC330.	85.91
d1ccwa_	137	Glutamate mutase, small subunit {Clostridium cochl	85.82
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	85.82
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	85.34
d3bula2	156	Methionine synthase, C-terminal domain {Escherichi	85.17
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.75
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	84.65
d1m1na_	477	Nitrogenase iron-molybdenum protein, alpha chain {	84.59
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	84.53
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	84.49
d1m6ia2	137	Apoptosis-inducing factor (AIF) {Human (Homo sapie	84.28
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	84.09
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	84.08
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	83.9
d2fhpa1	182	Putative methylase EF2452 {Enterococcus faecalis [	83.72
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	83.66
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	83.62
d1krwa_	123	NTRC receiver domain {Salmonella typhimurium [TaxI	83.53
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	83.49
d1up7a1	162	6-phospho-beta-glucosidase {Thermotoga maritima [T	83.47
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	83.36
d1t5la2	181	Nucleotide excision repair enzyme UvrB {Bacillus c	83.17
d1s6ya1	169	6-phospho-beta-glucosidase {Bacillus stearothermop	82.83
d2q4oa1	183	Hypothetical protein At2g37210/T2N18.3 {Thale cres	82.27
d1mvoa_	121	PhoP receiver domain {Bacillus subtilis [TaxId: 14	81.93
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	81.87
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	81.67
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	81.6
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	81.38
d1dbwa_	123	Transcriptional regulatory protein FixJ, receiver	80.85
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	80.63
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	80.61
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	80.59
d1ny5a1	137	Transcriptional activator sigm54 (NtrC1), N-termin	80.46
d1pvva2	163	Ornithine transcarbamoylase {Archaeon Pyrococcus f	80.4

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=9.5e-60  Score=387.46  Aligned_cols=251  Identities=29%  Similarity=0.455  Sum_probs=233.7

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |-+++. ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||+++++++++++
T Consensus         1 m~~~d~-m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~   79 (255)
T d1fmca_           1 MFNSDN-LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALA   79 (255)
T ss_dssp             CCCGGG-GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCC-CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHH
Confidence            556654 4799999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCCh
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMA  158 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~  158 (255)
                      +++.+++|++|+||||||... ..++ +.+.++|++++++|+.++++++|++.|+|+  +.++||++||..+..+.++..
T Consensus        80 ~~~~~~~g~iDilvnnAG~~~-~~~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~  157 (255)
T d1fmca_          80 DFAISKLGKVDILVNNAGGGG-PKPF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMT  157 (255)
T ss_dssp             HHHHHHHSSCCEEEECCCCCC-CCCT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCH
T ss_pred             HHHHHHcCCCCEeeeCCcCCC-CCcc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccc
Confidence            999999999999999999865 5555 789999999999999999999999999995  467899999999999999999


Q ss_pred             hhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          159 MYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +|++||+|+++|+|+++.|+++ |||||+|+||+++|++..... .++..+......|++|+.+|+|||+++.||+|+++
T Consensus       158 ~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~-~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s  236 (255)
T d1fmca_         158 SYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI-TPEIEQKMLQHTPIRRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC-CHHHHHHHHHTCSSCSCBCHHHHHHHHHHHHSGGG
T ss_pred             cchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC-CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999 999999999999999987665 35566777888999999999999999999999999


Q ss_pred             CCccccEEeeCCCccCCC
Q 025259          238 SYITGETLVVAGGMASRL  255 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~~  255 (255)
                      +++|||+|.+|||...+|
T Consensus       237 ~~itG~~i~vDGG~~~~l  254 (255)
T d1fmca_         237 SWVSGQILTVSGGGVQEL  254 (255)
T ss_dssp             TTCCSCEEEESTTSCCCC
T ss_pred             cCCcCCEEEECcCccccC
Confidence            999999999999987765

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.1e-59  Score=385.48  Aligned_cols=247  Identities=30%  Similarity=0.449  Sum_probs=232.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh-hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ-KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |.++|+||++|||||++|||+++|++|+++|++|++++|+. +.++++.+++++.+.++.+++||++++++++++++++.
T Consensus         1 M~~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~   80 (261)
T d1geea_           1 MYKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAI   80 (261)
T ss_dssp             CCGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHH
Confidence            45689999999999999999999999999999999999985 46788899999999999999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--C-CCeEEEEcCcCccCCCCCChhhH
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--K-GSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~-~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      +++|++|+||||||... ..++.+.+.++|++++++|+.++++++|++.|+|+  + +++||++||..+..+.++..+|+
T Consensus        81 ~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~  159 (261)
T d1geea_          81 KEFGKLDVMINNAGLEN-PVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HHhCCCCEeeccceecC-CcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccc
Confidence            99999999999999876 78899999999999999999999999999999984  2 34599999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+++++.|+++ |||||+|+||+++|++......+++..+......|++|+.+|+|||+++.||+|++++++
T Consensus       160 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~i  239 (261)
T d1geea_         160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIAAVAAWLASSEASYV  239 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             cCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCC
Confidence            9999999999999999999 999999999999999998777777788888999999999999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      |||+|.+|||+++
T Consensus       240 tG~~i~vDGG~sl  252 (261)
T d1geea_         240 TGITLFADGGMTL  252 (261)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCeEEECCCeeC
Confidence            9999999999975

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.9e-59  Score=384.94  Aligned_cols=247  Identities=30%  Similarity=0.479  Sum_probs=230.4

Q ss_pred             cccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            3 KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         3 ~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      |.|+...|++|++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++.+|+++++++++++++
T Consensus         1 ~~n~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~   80 (251)
T d2c07a1           1 KENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK   80 (251)
T ss_dssp             CCCCCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence            45677889999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|++.|+|+  +.|+||++||..+..+.++..+|
T Consensus        81 ~~~~~g~iDilvnnag~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y  159 (251)
T d2c07a1          81 ILTEHKNVDILVNNAGITR-DNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANY  159 (251)
T ss_dssp             HHHHCSCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHHhcCCceeeeecccccc-ccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHH
Confidence            9999999999999999875 78899999999999999999999999999999985  56899999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+|+++|+|+++.|+++ |||||+|+||+++|+|....  .++..+......|++|+.+|+|||+++.||+|+++.+
T Consensus       160 ~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~  237 (251)
T d2c07a1         160 SSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI--SEQIKKNIISNIPAGRMGTPEEVANLACFLSSDKSGY  237 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999999999999 99999999999999998765  4667788888999999999999999999999999999


Q ss_pred             ccccEEeeCCCcc
Q 025259          240 ITGETLVVAGGMA  252 (255)
Q Consensus       240 ~~G~~i~~dgG~~  252 (255)
                      +||++|.+|||++
T Consensus       238 itG~~i~vDGG~s  250 (251)
T d2c07a1         238 INGRVFVIDGGLS  250 (251)
T ss_dssp             CCSCEEEESTTSC
T ss_pred             CcCcEEEECCCcC
Confidence            9999999999975

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.1e-59  Score=382.83  Aligned_cols=245  Identities=29%  Similarity=0.496  Sum_probs=230.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+ .+.++.+++||++++++++++++++.+++
T Consensus         2 ~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (251)
T d1vl8a_           2 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF   81 (251)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            68999999999999999999999999999999999999999998888754 47889999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|+  +.|+||+++|..+. .+.++...|++||
T Consensus        82 g~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asK  160 (251)
T d1vl8a_          82 GKLDTVVNAAGINR-RHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASK  160 (251)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHH
Confidence            99999999999875 78999999999999999999999999999999996  45799999998765 4677889999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +|+++|+|+++.|+++ |||||+|+||+++|+|......+++..+......|++|+.+|+|||+++.||+|++++++|||
T Consensus       161 aal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~a~~itG~  240 (251)
T d1vl8a_         161 GGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGVAVFLASEEAKYVTGQ  240 (251)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHHHHHHHSGGGTTCCSC
T ss_pred             HhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhCCCcCc
Confidence            9999999999999999 999999999999999998888888888888899999999999999999999999999999999


Q ss_pred             EEeeCCCccCC
Q 025259          244 TLVVAGGMASR  254 (255)
Q Consensus       244 ~i~~dgG~~~~  254 (255)
                      +|.+|||++.+
T Consensus       241 ~i~vDGG~ta~  251 (251)
T d1vl8a_         241 IIFVDGGWTAN  251 (251)
T ss_dssp             EEEESTTGGGC
T ss_pred             EEEeCcCeeCc
Confidence            99999999853

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.1e-58  Score=380.04  Aligned_cols=246  Identities=26%  Similarity=0.405  Sum_probs=228.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+.  +.++.+++||++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999999999999999998888765  458999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      +|++|+||||||+.....++.+.+.++|++++++|+.++++++|++.|+|+  +.|+||++||..+..+.++...|++||
T Consensus        81 ~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  160 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAK  160 (258)
T ss_dssp             HSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHH
T ss_pred             hCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHH
Confidence            999999999999875567899999999999999999999999999999985  678999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +|+.+|+|+++.|+++ |||||+|+||+++|+|......      .....+......|++|+.+|+|||+++.||+|+++
T Consensus       161 aal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL~S~~s  240 (258)
T d1iy8a_         161 HGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGEAPEIAAVVAFLLSDDA  240 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999 9999999999999998765421      24466777888999999999999999999999999


Q ss_pred             CCccccEEeeCCCccCC
Q 025259          238 SYITGETLVVAGGMASR  254 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~~  254 (255)
                      +++||++|.+|||++..
T Consensus       241 ~~itG~~i~VDGG~saa  257 (258)
T d1iy8a_         241 SYVNATVVPIDGGQSAA  257 (258)
T ss_dssp             TTCCSCEEEESTTTTTB
T ss_pred             cCCcCceEEcCcchhcc
Confidence            99999999999999853

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=3.6e-58  Score=378.99  Aligned_cols=246  Identities=30%  Similarity=0.483  Sum_probs=230.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||++++++++++++++.+++
T Consensus         4 f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   83 (259)
T d2ae2a_           4 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   83 (259)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHh
Confidence            37899999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             C-CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 G-RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g-~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      + ++|++|||||... ..++.+.+.++|++++++|+.+++.++|++.|+|+  +.|+||+++|..+..+.++...|++||
T Consensus        84 ~~~idilvnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK  162 (259)
T d2ae2a_          84 HGKLNILVNNAGIVI-YKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATK  162 (259)
T ss_dssp             TTCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCceEEEECCceec-cCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHH
Confidence            7 7999999999875 78899999999999999999999999999999985  568999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH---HHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND---AVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +|+++|+|+++.|+++ |||||+|+||+++|+|.+.....+   +..+......|++|+.+|+|||++++||+|++++++
T Consensus       163 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~i  242 (259)
T d2ae2a_         163 GAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYV  242 (259)
T ss_dssp             HHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCC
Confidence            9999999999999999 999999999999999987766553   344566678999999999999999999999999999


Q ss_pred             cccEEeeCCCccCC
Q 025259          241 TGETLVVAGGMASR  254 (255)
Q Consensus       241 ~G~~i~~dgG~~~~  254 (255)
                      |||+|.+|||++..
T Consensus       243 tG~~i~VDGG~~a~  256 (259)
T d2ae2a_         243 TGQIIYVDGGLMAN  256 (259)
T ss_dssp             CSCEEEESTTGGGC
T ss_pred             cCcEEEECCCeEee
Confidence            99999999999864

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.5e-58  Score=377.74  Aligned_cols=239  Identities=33%  Similarity=0.550  Sum_probs=224.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.+..++.||++++++++++++++.+++|
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   77 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYL---GANGKGLMLNVTDPASIESVLEKIRAEFG   77 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHh---CCCCcEEEEEecCHHHhhhhhhhhhcccC
Confidence            689999999999999999999999999999999999999999888777   34678899999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++|+++|+|+  +.|+||++||..+..+.++.++|++||+|
T Consensus        78 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  156 (243)
T d1q7ba_          78 EVDILVNNAGITR-DNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAG  156 (243)
T ss_dssp             SCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             Ccceehhhhhhcc-ccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHH
Confidence            9999999999876 78899999999999999999999999999999994  56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+|+++.|+++ |||||+|+||+++|+|....  .++..+......|++++.+|+|||+++.||+|++++++|||+|
T Consensus       157 l~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itGq~i  234 (243)
T d1q7ba_         157 LIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL--SDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL  234 (243)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS--CHHHHHHHHTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHHHhCccCeEEEEEecceEechhhhhh--hhhHHHHHHhcCCCCCCCCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999 99999999999999998765  3455677788899999999999999999999999999999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.++
T Consensus       235 ~vdGG~~~  242 (243)
T d1q7ba_         235 HVNGGMYM  242 (243)
T ss_dssp             EESTTSSC
T ss_pred             EECCCeEe
Confidence            99999864

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.1e-58  Score=377.83  Aligned_cols=243  Identities=32%  Similarity=0.461  Sum_probs=210.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.  +..+.+++.+.++.++.||++|+++++++++++.+++
T Consensus         1 qrL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~--~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~   78 (247)
T d2ew8a1           1 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAP--EAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTF   78 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH--HHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            47999999999999999999999999999999999998753  3445667778899999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.++++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.++...|++||+
T Consensus        79 G~iDilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          79 GRCDILVNNAGIYP-LIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCCCEEEECCCCCC-CCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhc
Confidence            99999999999875 78999999999999999999999999999999995  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+++++.|+++ |||||+|+||+++|++..................|++++.+|||||+++.||+|+.++++||++
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~~v~fL~S~~s~~itG~~  237 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTGAAAFLASDDASFITGQT  237 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHHHHHHHTSGGGTTCCSCE
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHHHHHHHhCchhcCCcCCe
Confidence            999999999999999 9999999999999999876654444444444456889999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||+++
T Consensus       238 i~vDGG~~~  246 (247)
T d2ew8a1         238 LAVDGGMVR  246 (247)
T ss_dssp             EEESSSCCC
T ss_pred             EEECCCEec
Confidence            999999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6.8e-58  Score=377.24  Aligned_cols=240  Identities=29%  Similarity=0.446  Sum_probs=226.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||++++++++++++++.+++|++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc--c--CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM--Q--KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l--~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +||||||... ..++.+.+.++|++++++|+.++++++|+++|+|  +  ..++||+++|..+..+.++...|++||+|+
T Consensus        82 ilVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal  160 (257)
T d2rhca1          82 VLVNNAGRPG-GGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGV  160 (257)
T ss_dssp             EEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHH
T ss_pred             EEEecccccC-CCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHH
Confidence            9999999875 7899999999999999999999999999999975  2  457899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      .+|+|+++.|+++ |||||+|+||+++|+|.....         ..++..+......|++|+.+|+|||+++.||+|+++
T Consensus       161 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR~~~pedia~~v~fL~S~~s  240 (257)
T d2rhca1         161 VGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGRYVQPSEVAEMVAYLIGPGA  240 (257)
T ss_dssp             HHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999 999999999999999976532         235667788889999999999999999999999999


Q ss_pred             CCccccEEeeCCCcc
Q 025259          238 SYITGETLVVAGGMA  252 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~  252 (255)
                      +++|||+|.+|||++
T Consensus       241 ~~itG~~i~vDGG~~  255 (257)
T d2rhca1         241 AAVTAQALNVCGGLG  255 (257)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             cCCcCceEEECcCcc
Confidence            999999999999975

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=3e-58  Score=379.96  Aligned_cols=244  Identities=32%  Similarity=0.453  Sum_probs=217.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |+||++|||||++|||+++|++|+++|++|++++|+ .+.+++..+++.+ .+.++.+++||++++++++++++++.+++
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999999997 4667888888755 47789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.++...|++||+
T Consensus        82 G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1x1ta1          82 GRIDILVNNAGIQH-TALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKH  160 (260)
T ss_dssp             SCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCCcEEEeeccccc-CCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhh
Confidence            99999999999875 78999999999999999999999999999999996  4689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----------HHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      |+++|+++++.|+++ |||||+|+||+++|+|.......          ....+......|++|+.+|+|||++++||+|
T Consensus       161 al~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA~~v~fL~S  240 (260)
T d1x1ta1         161 GVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQLGGTAVFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHHHHHHHHHHHS
T ss_pred             hHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            999999999999999 99999999999999997654321          1223445677899999999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++++++|||+|.+|||++.|
T Consensus       241 ~~a~~itG~~i~vDGG~tar  260 (260)
T d1x1ta1         241 DAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             hhhCCCcCCEEEECcchhcC
Confidence            99999999999999999876

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=3.4e-58  Score=379.44  Aligned_cols=243  Identities=30%  Similarity=0.522  Sum_probs=227.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||++++++++++++++.+++
T Consensus         1 krL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (260)
T d1zema1           1 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||......++.+.+.++|++++++|+.++++++|++.|+|+  +.|+||++||..+..+.++...|++||+
T Consensus        81 g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKa  160 (260)
T d1zema1          81 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKG  160 (260)
T ss_dssp             SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHH
T ss_pred             CCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHH
Confidence            99999999999875467899999999999999999999999999999984  6789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc--------------CCHHHHHHhhccCCCCCCCChHHHHHHHH
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL--------------GNDAVRKALEGKTLLNRLGTTGNMAAAIA  230 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~va~~~~  230 (255)
                      |+++|+|+++.|+++ |||||+|+||+++|+|.....              .++...+......|++|+.+|+|||+++.
T Consensus       161 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~  240 (260)
T d1zema1         161 AIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIPGVVA  240 (260)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTSSCBCGGGSHHHHH
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence            999999999999999 999999999999999864321              12445677778899999999999999999


Q ss_pred             HhcCCCCCCccccEEeeCCC
Q 025259          231 FLASDDASYITGETLVVAGG  250 (255)
Q Consensus       231 ~l~s~~~~~~~G~~i~~dgG  250 (255)
                      ||+|++++++|||+|.+|||
T Consensus       241 fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         241 FLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHSGGGTTCCSCEEEESCC
T ss_pred             HHhCchhcCccCCeEEeCCC
Confidence            99999999999999999998

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=4.8e-58  Score=377.72  Aligned_cols=243  Identities=26%  Similarity=0.439  Sum_probs=224.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.+.++++.+++   +.++.+++||++++++++++++++.+++
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~---~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   77 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI---GPAACAIALDVTDQASIDRCVAELLDRW   77 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEeeCCCHHHHHHHHHHHHHHh
Confidence            4699999999999999999999999999999999999999888887766   6789999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-c--CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-Q--KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~--~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++|++.|.| +  +.++||++||..+..+.++.+.|++||
T Consensus        78 g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          78 GSIDILVNNAALFD-LAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             SCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCccEEEeeccccc-ccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence            99999999999875 7899999999999999999999999999999875 3  458999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc---------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL---------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      +|+++|+++++.|+++ |||||+|+||+++|++.....         ...+..+......|++|+.+|+|||+++.||+|
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~p~evA~~v~fL~S  236 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGRMGRAEDLTGMAIFLAT  236 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCHHHHHHHHHHTTS
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence            9999999999999999 999999999999999865432         234566777788999999999999999999999


Q ss_pred             CCCCCccccEEeeCCCccCC
Q 025259          235 DDASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~~~~~~~G~~i~~dgG~~~~  254 (255)
                      ++++++|||+|.+|||.++.
T Consensus       237 ~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         237 PEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             GGGTTCCSCEEEESTTSSCC
T ss_pred             chhCCccCceEEECcchhhC
Confidence            99999999999999999874

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=4.8e-58  Score=378.06  Aligned_cols=243  Identities=30%  Similarity=0.478  Sum_probs=195.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.++.||++++++++++++++.+++ 
T Consensus         5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   84 (259)
T d1xq1a_           5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG   84 (259)
T ss_dssp             CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999999999999999988899999999999999999999999998 


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++|++.|+|+  +.|+||++||..+..+.++...|++||+
T Consensus        85 g~idilvnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  163 (259)
T d1xq1a_          85 GKLDILINNLGAIR-SKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKG  163 (259)
T ss_dssp             TCCSEEEEECCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHH
T ss_pred             CCcccccccccccC-CCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccccccccccccccc
Confidence            68999999999876 78899999999999999999999999999999995  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+.+|+|+++.|+++ |||||+|+||+++|+|...... ++..+......|++++.+|||||+++.||+|++++++||++
T Consensus       164 al~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~iTG~~  242 (259)
T d1xq1a_         164 ALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD-DEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQT  242 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEECCSCC--------------------------CCGGGGHHHHHHHTSGGGTTCCSCE
T ss_pred             chhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhch-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCCcCcE
Confidence            999999999999999 9999999999999999876543 34566677788999999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||+++
T Consensus       243 i~vDGG~s~  251 (259)
T d1xq1a_         243 ICVDGGLTV  251 (259)
T ss_dssp             EECCCCEEE
T ss_pred             EEeCCCEEC
Confidence            999999875

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=2e-57  Score=372.81  Aligned_cols=243  Identities=28%  Similarity=0.440  Sum_probs=224.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.. +.++.+++||++|+++++++++++.+++|
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT-PDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC-TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC-CCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            69999999999999999999999999999999999999999998888754 45899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC---CeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG---SSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~---~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|++.   ++||++||..+..+.++...|++||+
T Consensus        82 ~iDiLVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          82 PVSTLVNNAGIAV-NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             SCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CceEEEecccccc-ccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            9999999999876 7899999999999999999999999999999999632   48999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--hCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          166 ALLGLTKALAAE--MAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       166 a~~~l~~~la~e--~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+.+|+++++.|  +++ |||||+|+||+++|+|...... ++.........|++|+.+|+|||+++.||+|++++++||
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG  239 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG-AEEAMSQRTKTPMGHIGEPNDIAYICVYLASNESKFATG  239 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT-HHHHHTSTTTCTTSSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCC-HHHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhCCCcC
Confidence            999999999998  567 9999999999999999877644 334445566789999999999999999999999999999


Q ss_pred             cEEeeCCCccCC
Q 025259          243 ETLVVAGGMASR  254 (255)
Q Consensus       243 ~~i~~dgG~~~~  254 (255)
                      ++|.+|||++.|
T Consensus       240 ~~i~vDGG~ta~  251 (251)
T d1zk4a1         240 SEFVVDGGYTAQ  251 (251)
T ss_dssp             CEEEESTTGGGC
T ss_pred             cEEEECcccccC
Confidence            999999999875

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=4.1e-57  Score=372.07  Aligned_cols=241  Identities=29%  Similarity=0.448  Sum_probs=224.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+.++.+++||++++++++++++++.+++|++|+
T Consensus         2 KValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   81 (255)
T d1gega_           2 KVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV   81 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred             CEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence            67899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      ||||||+.. ..++.+.++++|++++++|+.++++++|+++|+|.   +.++||++||..+..+.++.+.|++||+|+++
T Consensus        82 lVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  160 (255)
T d1gega_          82 IVNNAGVAP-STPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRG  160 (255)
T ss_dssp             EEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHH
T ss_pred             EEecccccc-cCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHh
Confidence            999999875 78999999999999999999999999999999874   34679999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC---------CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG---------NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      |+|+++.|+++ |||||+|+||+++|+|......         ..+..+......|++|+.+|+|||+++.||+|+++++
T Consensus       161 ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~  240 (255)
T d1gega_         161 LTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAACVSYLASPDSDY  240 (255)
T ss_dssp             HHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             hHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCC
Confidence            99999999999 9999999999999998765422         2345566778899999999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +||++|.+|||..++
T Consensus       241 itG~~i~vDGG~~~n  255 (255)
T d1gega_         241 MTGQSLLIDGGMVFN  255 (255)
T ss_dssp             CCSCEEEESSSSSCC
T ss_pred             ccCcEEEecCCEEeC
Confidence            999999999998753

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.4e-57  Score=369.39  Aligned_cols=237  Identities=28%  Similarity=0.389  Sum_probs=219.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      -+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.+..+++||++++++++++++++.+++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   78 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAEL---ADAARYVHLDVTQPAQWKAAVDTAVTAF   78 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---hCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4789999999999999999999999999999999999999888887776   3468889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++|++.|+|+  +.++||++||..+..+.++...|+++|+
T Consensus        79 g~idilinnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKa  157 (244)
T d1nffa_          79 GGLHVLVNNAGILN-IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKF  157 (244)
T ss_dssp             SCCCEEEECCCCCC-CBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCCeEEEECCcccC-CCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHH
Confidence            99999999999875 78899999999999999999999999999999985  5689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++|+|+++.|+++ |||||+|+||+++|+|......       .....|++++.+|+|||+++.||++++++++|||+
T Consensus       158 al~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-------~~~~~pl~R~~~p~diA~~v~fL~s~~s~~itG~~  230 (244)
T d1nffa_         158 AVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE-------DIFQTALGRAAEPVEVSNLVVYLASDESSYSTGAE  230 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT-------TCSCCSSSSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH-------HHHhccccCCCCHHHHHHHHHHHhChhhCCCcCCE
Confidence            999999999999999 9999999999999999765432       13457899999999999999999999999999999


Q ss_pred             EeeCCCccCCC
Q 025259          245 LVVAGGMASRL  255 (255)
Q Consensus       245 i~~dgG~~~~~  255 (255)
                      |.+|||++..|
T Consensus       231 i~vDGG~~ag~  241 (244)
T d1nffa_         231 FVVDGGTVAGL  241 (244)
T ss_dssp             EEESTTGGGSC
T ss_pred             EEECCCeeccc
Confidence            99999998653

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=4.8e-57  Score=369.00  Aligned_cols=238  Identities=31%  Similarity=0.513  Sum_probs=224.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +++|||||++|||+++|++|+++|++|++. .|+++.++++.+++++.+.++.+++||++++++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            689999999999999999999999999886 5677888999999999899999999999999999999999999999999


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.++...|++||+|+.+
T Consensus        82 iLVnnAg~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~  160 (244)
T d1edoa_          82 VVVNNAGITR-DTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIG  160 (244)
T ss_dssp             EEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHH
T ss_pred             cccccccccc-ccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHH
Confidence            9999999876 78999999999999999999999999999999994  67899999999999999999999999999999


Q ss_pred             HHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc-CCCCCCccccEEee
Q 025259          170 LTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA-SDDASYITGETLVV  247 (255)
Q Consensus       170 l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~-s~~~~~~~G~~i~~  247 (255)
                      |+|+++.|+++ |||||+|+||+++|+|....  .++..+......|++|+.+|+|||+++.||+ |+++.++|||+|.+
T Consensus       161 ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~~~p~dvA~~v~fLa~S~~a~~itG~~i~v  238 (244)
T d1edoa_         161 FSKTAAREGASRNINVNVVCPGFIASDMTAKL--GEDMEKKILGTIPLGRTGQPENVAGLVEFLALSPAASYITGQAFTI  238 (244)
T ss_dssp             HHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT--CHHHHHHHHTSCTTCSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEE
T ss_pred             ChHHHHHHHhhhCcEEEEEecceeccHHHHHh--hHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHCCchhcCCcCCeEEe
Confidence            99999999999 99999999999999998765  4566778888999999999999999999996 89999999999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||+++
T Consensus       239 dGG~si  244 (244)
T d1edoa_         239 DGGIAI  244 (244)
T ss_dssp             STTTTC
T ss_pred             CCCeeC
Confidence            999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=5.7e-57  Score=368.10  Aligned_cols=237  Identities=27%  Similarity=0.404  Sum_probs=216.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++     +..++.||++++++++++++++.+++
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~-----~~~~~~~Dv~~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAV-----GAHPVVMDVADPASVERGFAEALAHL   75 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----TCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc-----CCeEEEEecCCHHHHHHHHHHHHHhc
Confidence            4689999999999999999999999999999999999998888776644     35678999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC--CeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG--SSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~--~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|+||||||+.. ..++.+.+.++|++++++|+.+++++.|++.|+|+++  +.|+++|| .+..+.++..+|++||+
T Consensus        76 g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKa  153 (242)
T d1ulsa_          76 GRLDGVVHYAGITR-DNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMA  153 (242)
T ss_dssp             SSCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHH
T ss_pred             CCceEEEECCcccc-cCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHH
Confidence            99999999999875 7899999999999999999999999999999999643  34555554 57888899999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccE
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      |+++|+|+++.|+++ |||||+|+||+++|++....  +++..+......|++|+.+|+|||+++.||+|++++++||++
T Consensus       154 al~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~itG~~  231 (242)
T d1ulsa_         154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV--PEKVREKAIAATPLGRAGKPLEVAYAALFLLSDESSFITGQV  231 (242)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS--CHHHHHHHHHTCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC--CHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhchhhCCCCCcE
Confidence            999999999999999 99999999999999998654  456778888899999999999999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||+++
T Consensus       232 i~vDGG~t~  240 (242)
T d1ulsa_         232 LFVDGGRTI  240 (242)
T ss_dssp             EEESTTTTT
T ss_pred             EEECCCccC
Confidence            999999975

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-57  Score=369.70  Aligned_cols=241  Identities=32%  Similarity=0.472  Sum_probs=219.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++    .+..++.||++|+++++++++++.+++
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~----~~~~~~~~Dvs~~~~v~~~~~~~~~~~   77 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL----PGAVFILCDVTQEDDVKTLVSETIRRF   77 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC----TTEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEccCCCHHHHHHHHHHHHHhc
Confidence            4799999999999999999999999999999999999998887766554    457889999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      |++|+||||||......++.+.+.++|++++++|+.+++.++|+++|+|+ .+|+||++||..+..+.++...|+++|+|
T Consensus        78 g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  157 (250)
T d1ydea1          78 GRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGA  157 (250)
T ss_dssp             SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHH
T ss_pred             CCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhh
Confidence            99999999999876567788999999999999999999999999999996 35899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +++|+|+++.|+++ |||||+|+||+++|+|.+....    .....++.....|++|+.+|+|||+++.||+|+ ++++|
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eva~~v~fL~Sd-a~~it  236 (250)
T d1ydea1         158 VTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAEVGAAAVFLASE-ANFCT  236 (250)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHHHH-CTTCC
T ss_pred             HHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHhCc-cCCCc
Confidence            99999999999999 9999999999999999865432    233455666678999999999999999999986 78999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||+|.+|||.++
T Consensus       237 G~~i~vDGG~~l  248 (250)
T d1ydea1         237 GIELLVTGGAEL  248 (250)
T ss_dssp             SCEEEESTTTTS
T ss_pred             CCeEEECCCccc
Confidence            999999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.8e-57  Score=373.06  Aligned_cols=239  Identities=28%  Similarity=0.392  Sum_probs=220.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.+++||++++++++++++++.+++|
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   78 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG   78 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCceEEEEcccCCHHHHHHHHHHHHHHcC
Confidence            689999999999999999999999999999999999998887766554   56789999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+  +.|+||++||..+..+.++..+|++||+|
T Consensus        79 ~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaa  157 (254)
T d1hdca_          79 SVDGLVNNAGIST-GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWG  157 (254)
T ss_dssp             CCCEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHH
T ss_pred             CccEEEecCcccc-ccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHH
Confidence            9999999999875 78999999999999999999999999999999985  56899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCC-ChHHHHHHHHHhcCCCCCCccccE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLG-TTGNMAAAIAFLASDDASYITGET  244 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~va~~~~~l~s~~~~~~~G~~  244 (255)
                      +++|+++++.|+++ |||||+|+||+++|+|........  .+......|++|+. +|+|||+++.||+|++++++||++
T Consensus       158 l~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~--~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a~~itG~~  235 (254)
T d1hdca_         158 VRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQ--GEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYVTGAE  235 (254)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCC--STTSCTTSTTSSCB-CHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred             HHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHH--HHHHHhCCCCCCCCCCHHHHHHHHHHHhchhhCCCCCce
Confidence            99999999999999 999999999999999987654332  34455667899997 699999999999999999999999


Q ss_pred             EeeCCCccC
Q 025259          245 LVVAGGMAS  253 (255)
Q Consensus       245 i~~dgG~~~  253 (255)
                      |.+|||++.
T Consensus       236 i~vDGG~t~  244 (254)
T d1hdca_         236 LAVDGGWTT  244 (254)
T ss_dssp             EEESTTTTT
T ss_pred             EEeCCCccC
Confidence            999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-56  Score=367.03  Aligned_cols=240  Identities=32%  Similarity=0.510  Sum_probs=215.8

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|+||++|||||++|||+++|++|+++|++|++++|+++..+ ..+++   +  ..+++||++++++++++++++.+++|
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~-~~~~~---~--~~~~~~Dv~~~~~v~~~~~~~~~~~G   75 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKE-VAEAI---G--GAFFQVDLEDERERVRFVEEAAYALG   75 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHH-HHHHH---T--CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHc---C--CeEEEEeCCCHHHHHHHHHHHHHhcC
Confidence            589999999999999999999999999999999999987643 33332   3  34678999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.++++++|++.|+|++  .++||+++|..+..+.++...|+++|+|
T Consensus        76 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaa  154 (248)
T d2d1ya1          76 RVDVLVNNAAIAA-PGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGG  154 (248)
T ss_dssp             CCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHH
T ss_pred             CCCeEEEeCcCCC-CCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHH
Confidence            9999999999876 789999999999999999999999999999999964  5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      +++|+|+++.|+++ |||||+|+||+++|++......    +++..+......|++|+.+|+|||+.+.||+|++++++|
T Consensus       155 l~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~fL~S~~s~~it  234 (248)
T d2d1ya1         155 LVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASFIT  234 (248)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCC
Confidence            99999999999999 9999999999999998765432    233456677888999999999999999999999999999


Q ss_pred             ccEEeeCCCccCCC
Q 025259          242 GETLVVAGGMASRL  255 (255)
Q Consensus       242 G~~i~~dgG~~~~~  255 (255)
                      ||+|.+|||++..+
T Consensus       235 G~~i~vDGG~tas~  248 (248)
T d2d1ya1         235 GAILPVDGGMTASF  248 (248)
T ss_dssp             SCEEEESTTGGGBC
T ss_pred             CcEEEcCcCccccC
Confidence            99999999998753

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2e-56  Score=363.58  Aligned_cols=231  Identities=29%  Similarity=0.509  Sum_probs=207.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.+           .++..++||++|+++++++++++.+++|
T Consensus         4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   72 (237)
T d1uzma1           4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP-----------KGLFGVEVDVTDSDAVDRAFTAVEEHQG   72 (237)
T ss_dssp             CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-----------TTSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh-----------cCceEEEEecCCHHHHHHHHHHHHHhcC
Confidence            58999999999999999999999999999999999997653           3467899999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      ++|+||||||... ..++.+.+.++|++++++|+.+++.++|+++|+|+  +.++||++||..+..+.++..+|++||+|
T Consensus        73 ~iDiLVnnAG~~~-~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa  151 (237)
T d1uzma1          73 PVEVLVSNAGLSA-DAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAG  151 (237)
T ss_dssp             SCSEEEEECSCCC------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHH
T ss_pred             CceEEEeeecccc-cccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHH
Confidence            9999999999875 78999999999999999999999999999999995  45699999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          167 LLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       167 ~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +++|+|+++.|+++ |||||+|+||+++|+|....  ++...+......|++|+.+|||||+++.||+|++++++|||+|
T Consensus       152 l~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~--~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~~itG~~i  229 (237)
T d1uzma1         152 VIGMARSIARELSKANVTANVVAPGYIDTDMTRAL--DERIQQGALQFIPAKRVGTPAEVAGVVSFLASEDASYISGAVI  229 (237)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS--CHHHHHHHGGGCTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             HHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCCeE
Confidence            99999999999999 99999999999999998765  4566777888899999999999999999999999999999999


Q ss_pred             eeCCCccC
Q 025259          246 VVAGGMAS  253 (255)
Q Consensus       246 ~~dgG~~~  253 (255)
                      .+|||.++
T Consensus       230 ~vdGG~~m  237 (237)
T d1uzma1         230 PVDGGMGM  237 (237)
T ss_dssp             EESTTTTC
T ss_pred             EECCCCCC
Confidence            99999764

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-56  Score=363.80  Aligned_cols=239  Identities=29%  Similarity=0.399  Sum_probs=220.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |.+.|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.    .+..+.+|++|+++++++++    
T Consensus         1 M~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~----   72 (244)
T d1pr9a_           1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECP----GIEPVCVDLGDWEATERALG----   72 (244)
T ss_dssp             CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHST----TCEEEECCTTCHHHHHHHHT----
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcC----CCeEEEEeCCCHHHHHHHHH----
Confidence            4457999999999999999999999999999999999999999888776653    46778999999999877664    


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-c--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-Q--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|+||||||... ..++.+.+.++|++.+++|+.+++.++|++.|.| +  +.++||+++|..+..+.++...|++
T Consensus        73 ~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~a  151 (244)
T d1pr9a_          73 SVGPVDLLVNNAAVAL-LQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCS  151 (244)
T ss_dssp             TCCCCCEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             HhCCceEEEecccccc-ccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhh
Confidence            5799999999999876 7899999999999999999999999999999965 3  4589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ||+|+++|+|+++.|+++ |||||+|+||+++|++........+..+......|++|+.+|+|||+.+.||+|+.++++|
T Consensus       152 sKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~fL~S~~a~~it  231 (244)
T d1pr9a_         152 TKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILFLLSDRSGMTT  231 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhCCcC
Confidence            999999999999999999 9999999999999999988888888888888999999999999999999999999999999


Q ss_pred             ccEEeeCCCccC
Q 025259          242 GETLVVAGGMAS  253 (255)
Q Consensus       242 G~~i~~dgG~~~  253 (255)
                      ||+|.+|||++.
T Consensus       232 G~~i~vDGG~~A  243 (244)
T d1pr9a_         232 GSTLPVEGGFWA  243 (244)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CcEEEECccHhh
Confidence            999999999974

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.3e-56  Score=366.84  Aligned_cols=241  Identities=27%  Similarity=0.343  Sum_probs=220.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++   +.+..+++||++++++++++++++.+++
T Consensus         2 nrL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   78 (253)
T d1hxha_           2 NRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL   78 (253)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---CCCeEEEEeecCCHHHHHHHHHHHHHHh
Confidence            4699999999999999999999999999999999999999988887776   5678899999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTA  166 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa  166 (255)
                      |++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+ ++|+||++||..+..+.++..+|++||+|
T Consensus        79 g~iDilVnnAG~~~-~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaa  157 (253)
T d1hxha_          79 GTLNVLVNNAGILL-PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAA  157 (253)
T ss_dssp             CSCCEEEECCCCCC-CBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             CCCCeEEecccccC-CCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHH
Confidence            99999999999875 78899999999999999999999999999999996 46899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCC---HHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          167 LLGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGN---DAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       167 ~~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +.+|+|+++.|+++   +||||+|+||+++|++.....+.   ++.........|.+++.+|||||++++||+|++++++
T Consensus       158 l~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  237 (253)
T d1hxha_         158 VSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVM  237 (253)
T ss_dssp             HHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHHHHHHHHHHHhChhhCCC
Confidence            99999999999976   49999999999999998766543   2333334445677899999999999999999999999


Q ss_pred             cccEEeeCCCcc
Q 025259          241 TGETLVVAGGMA  252 (255)
Q Consensus       241 ~G~~i~~dgG~~  252 (255)
                      |||+|.+|||+.
T Consensus       238 tG~~i~VDGG~~  249 (253)
T d1hxha_         238 SGSELHADNSIL  249 (253)
T ss_dssp             CSCEEEESSSCT
T ss_pred             cCcEEEECccHh
Confidence            999999999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.3e-56  Score=362.90  Aligned_cols=237  Identities=25%  Similarity=0.364  Sum_probs=219.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++    ..+..+.||++++++++++++    ++
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~----~~   72 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC----PGIEPVCVDLGDWDATEKALG----GI   72 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS----TTCEEEECCTTCHHHHHHHHT----TC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----CCCeEEEEeCCCHHHHHHHHH----Hc
Confidence            4689999999999999999999999999999999999998887776654    346778999999999776654    67


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHhH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVTK  164 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~sK  164 (255)
                      |++|+||||||... ..++.+.+.++|++.+++|+.++++++|++.|.|.   ..++||+++|..+..+.++...|+++|
T Consensus        73 g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          73 GPVDLLVNNAALVI-MQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCeEEEECCcccc-chhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            99999999999875 78999999999999999999999999999999753   457999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          165 TALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       165 aa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +|+.+|+|+++.|+++ |||||+|+||+++|+|.......++..+......|++|+.+|||||+++.||+|++++++|||
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~fL~S~~s~~itG~  231 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILFLLSDRSASTSGG  231 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHHHHSGGGTTCCSS
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCcCCc
Confidence            9999999999999999 999999999999999998888888888888999999999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||++.
T Consensus       232 ~i~vDGG~~a  241 (242)
T d1cyda_         232 GILVDAGYLA  241 (242)
T ss_dssp             EEEESTTGGG
T ss_pred             eEEeCcchhc
Confidence            9999999875

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=1.6e-55  Score=362.79  Aligned_cols=244  Identities=31%  Similarity=0.498  Sum_probs=224.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (255)
                      +|+||++|||||++|||++++++|+++|++|++++|+++.++++.+++++.+.++++++||++++++++++++++.+++ 
T Consensus         3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   82 (258)
T d1ae1a_           3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD   82 (258)
T ss_dssp             CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      +++|+||||||... ..++.+.+.++|++++++|+.+++.+.+++.|+|+  +.++||++||..+..+.++...|+++|+
T Consensus        83 g~idilinnag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~  161 (258)
T d1ae1a_          83 GKLNILVNNAGVVI-HKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKG  161 (258)
T ss_dssp             SCCCEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCcEEEeccccccc-cCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHH
Confidence            57999999999876 78999999999999999999999999999999985  6789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC----CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG----NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      |+++|+|.+++|+++ |||||+|+||+++|+|......    .++..+......|++++.+|+|||+++.||+|++++++
T Consensus       162 al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~pediA~~v~fL~S~~s~~i  241 (258)
T d1ae1a_         162 AINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYI  241 (258)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999 9999999999999998765533    35677888888999999999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      ||+.|.+|||++.
T Consensus       242 tG~~i~vDGG~s~  254 (258)
T d1ae1a_         242 TGQIIWADGGFTA  254 (258)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCcEEEeCCCeec
Confidence            9999999999975

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=7.9e-56  Score=365.42  Aligned_cols=247  Identities=26%  Similarity=0.372  Sum_probs=225.2

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      +.|.++|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++.+ .+.++.++.||+++++++++++++
T Consensus         1 p~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~   80 (260)
T d1h5qa_           1 PGFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQ   80 (260)
T ss_dssp             CCEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHH
Confidence            3577899999999999999999999999999999999999999999988888754 578899999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccC-------
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQ-------  152 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~-------  152 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++++++|+.+++.++|++.|+|.   ..+.|++++|.....       
T Consensus        81 ~~~~~g~iDilVnnAg~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          81 IDADLGPISGLIANAGVSV-VKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHHSCSEEEEEECCCCCC-CSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHHhCCCcEecccccccc-cCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence            9999999999999999875 78899999999999999999999999999999883   345777777766543       


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      +.++...|+++|+|+.+|+|+++.|+++ |||||+|+||+++|++....  .++..+......|++|+.+|+|||+++.|
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~--~~~~~~~~~~~~pl~R~g~pedvA~~v~f  237 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM--DKKIRDHQASNIPLNRFAQPEEMTGQAIL  237 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS--CHHHHHHHHHTCTTSSCBCGGGGHHHHHH
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc--CHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            3357789999999999999999999999 99999999999999998765  56677888889999999999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccC
Q 025259          232 LASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|++++++|||+|.+|||+++
T Consensus       238 L~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         238 LLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HHSGGGTTCCSCEEEECTTGGG
T ss_pred             HhcchhCCCcCceEEECCCeec
Confidence            9999999999999999999864

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=9.2e-56  Score=365.80  Aligned_cols=246  Identities=30%  Similarity=0.475  Sum_probs=211.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+   .++.+++||++++++++++++++.
T Consensus         1 ~rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~   80 (264)
T d1spxa_           1 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   80 (264)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999998764   369999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcC-ccCCCCCChh
Q 025259           85 EKYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIA-GYQPPSAMAM  159 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~-~~~~~~~~~~  159 (255)
                      +++|++|+||||||...   ...++.+.+.++|++++++|+.+++.++|+++|+|+ ..+.+|+++|.. +..+.++...
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~  160 (264)
T d1spxa_          81 GKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPY  160 (264)
T ss_dssp             HHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHH
T ss_pred             HHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchh
Confidence            99999999999999753   233566779999999999999999999999999996 346777777766 4778899999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC-------HHHHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN-------DAVRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      |++||+|+++|+|+++.|+++ |||||+|+||+++|+|......+       ....+......|++|+.+|+|||+++.|
T Consensus       161 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~pedvA~~v~f  240 (264)
T d1spxa_         161 YSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAF  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSSCBCHHHHHHHHHH
T ss_pred             hhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999 99999999999999987654322       2334556677899999999999999999


Q ss_pred             hcCC-CCCCccccEEeeCCCccC
Q 025259          232 LASD-DASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~-~~~~~~G~~i~~dgG~~~  253 (255)
                      |+|+ .++|+|||+|.+|||+++
T Consensus       241 L~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         241 LADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HhCCcccCCccCceEEeCCChhh
Confidence            9995 489999999999999974

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=4.9e-55  Score=362.18  Aligned_cols=246  Identities=30%  Similarity=0.494  Sum_probs=218.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      -+|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++...+ .+.++.||++++++++++++++.+++
T Consensus         2 nrL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (268)
T d2bgka1           2 NRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPD-VISFVHCDVTKDEDVRNLVDTTIAKH   80 (268)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTT-TEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCC-ceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            37999999999999999999999999999999999999999999999886544 57789999999999999999999999


Q ss_pred             CCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCC-hhhHHh
Q 025259           88 GRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAM-AMYGVT  163 (255)
Q Consensus        88 g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~-~~y~~s  163 (255)
                      |++|++|||||.... +..+.+.+.++|++++++|+.++++++|++.|+|+  +.++||+++|..+..+.++. ..|++|
T Consensus        81 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~as  160 (268)
T d2bgka1          81 GKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTAT  160 (268)
T ss_dssp             SCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHH
T ss_pred             CCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchh
Confidence            999999999998642 23578999999999999999999999999999985  56799999999998876664 589999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCH-HHHH--HhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGND-AVRK--ALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|+|.......+ +..+  ......|.+++.+|||||+++.||+|+++.+
T Consensus       161 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~  240 (268)
T d2bgka1         161 KHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKY  240 (268)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCC
Confidence            99999999999999999 999999999999999987665432 2222  2233457889999999999999999999999


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      +|||+|.+|||++..
T Consensus       241 itGq~i~VDGG~t~~  255 (268)
T d2bgka1         241 VSGLNLVIDGGYTRT  255 (268)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             ccCceEEECcCcccC
Confidence            999999999999853

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.4e-55  Score=363.34  Aligned_cols=248  Identities=24%  Similarity=0.292  Sum_probs=217.8

Q ss_pred             cccccCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259            5 NMAKRFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ||..+|+||++|||||+|  |||+++|++|+++|++|++++|+++..++.. ++...+.+..++++|+++++++++++++
T Consensus         1 M~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~v~~~~~~   79 (256)
T d1ulua_           1 MLTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAE-KLAEALGGALLFRADVTQDEELDALFAG   79 (256)
T ss_dssp             CEEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHHHHTTCCEEEECCTTCHHHHHHHHHH
T ss_pred             CCCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHH-HhhhccCcccccccccCCHHHHHHHHHH
Confidence            456689999999999987  9999999999999999999999976655544 4444455677899999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           83 TVEKYGRIDVFVLNAAVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +.+++|++|+||||||...   ...++.+.+.++|++.+++|+.+++.+++++.|+|+++++||++||..+..+.++...
T Consensus        80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~  159 (256)
T d1ulua_          80 VKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNV  159 (256)
T ss_dssp             HHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHH
T ss_pred             HHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchH
Confidence            9999999999999999753   1335678899999999999999999999999999998899999999999999999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+++|+|+++|+|+++.|+++ |||||+|+||+++|++.......++..+......|++|+.+|+|||+++.||+|++++
T Consensus       160 Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~fL~S~~s~  239 (256)
T d1ulua_         160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEEVGNLGLFLLSPLAS  239 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhC
Confidence            999999999999999999999 9999999999999999887777778888888999999999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++|||+|.+|||+++
T Consensus       240 ~itG~~i~VDGG~~~  254 (256)
T d1ulua_         240 GITGEVVYVDAGYHI  254 (256)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CccCCeEEECcCEeC
Confidence            999999999999975

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.2e-55  Score=363.50  Aligned_cols=245  Identities=29%  Similarity=0.442  Sum_probs=220.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++.+.+   .++.++.||++++++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998864   4689999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           86 KYGRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      ++|++|++|||||.... ..+..+.+.++|++++++|+.+++.++|++.|+|+  +.++|+++||..+..+.++...|++
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~a  160 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYAC  160 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehh
Confidence            99999999999997532 33556678999999999999999999999999995  4567888888888899999999999


Q ss_pred             hHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH-------HHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          163 TKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA-------VRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ||+|+++|+|+++.|+++ |||||+|+||+++|++.........       .........|++|+.+|+|||+++.||+|
T Consensus       161 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~pediA~~v~fL~S  240 (274)
T d1xhla_         161 AKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEEIANIIVFLAD  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999 9999999999999999876543322       22334466899999999999999999999


Q ss_pred             C-CCCCccccEEeeCCCccC
Q 025259          235 D-DASYITGETLVVAGGMAS  253 (255)
Q Consensus       235 ~-~~~~~~G~~i~~dgG~~~  253 (255)
                      + .++|+|||+|.+|||+++
T Consensus       241 ~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         241 RNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             HHHHTTCCSCEEEESTTGGG
T ss_pred             CccccCccCcEEEeCcCHHH
Confidence            5 689999999999999985

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=4.7e-55  Score=362.92  Aligned_cols=245  Identities=28%  Similarity=0.459  Sum_probs=218.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++++.+   .++.+++||++++++++++++++.+
T Consensus         2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~   81 (272)
T d1xkqa_           2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLK   81 (272)
T ss_dssp             TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            5899999999999999999999999999999999999999999999998764   4799999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCc----CCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcC-cCccCCCCCChh
Q 025259           86 KYGRIDVFVLNAAVNPYAADL----LKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISS-IAGYQPPSAMAM  159 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss-~~~~~~~~~~~~  159 (255)
                      ++|++|+||||||... ..++    .+.+.++|++++++|+.+++.++|+++|+|+ ..+.+|+++| .++..+.++...
T Consensus        82 ~~g~iDilvnnAG~~~-~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~  160 (272)
T d1xkqa_          82 QFGKIDVLVNNAGAAI-PDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLY  160 (272)
T ss_dssp             HHSCCCEEEECCCCCC-CCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHH
T ss_pred             HhCCceEEEeCCcccC-cccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcch
Confidence            9999999999999865 3333    4678889999999999999999999999995 3466666666 466889999999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHH-------HHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDA-------VRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      |++||+|+++|+|+++.|+++ |||||+|+||+++|+|.........       .........|++|+.+|+|||+++.|
T Consensus       161 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pediA~~v~f  240 (272)
T d1xkqa_         161 YAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIGAAGKPEHIANIILF  240 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHH
Confidence            999999999999999999999 9999999999999999876654432       23445567899999999999999999


Q ss_pred             hcCCC-CCCccccEEeeCCCccCC
Q 025259          232 LASDD-ASYITGETLVVAGGMASR  254 (255)
Q Consensus       232 l~s~~-~~~~~G~~i~~dgG~~~~  254 (255)
                      |+|++ +.|+|||+|.+|||+++.
T Consensus       241 L~S~~as~~iTG~~i~vDGG~~l~  264 (272)
T d1xkqa_         241 LADRNLSFYILGQSIVADGGTSLV  264 (272)
T ss_dssp             HHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HhCcchhCCccCeEEEeCcCHHHh
Confidence            99965 679999999999999863

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.4e-55  Score=363.72  Aligned_cols=244  Identities=26%  Similarity=0.452  Sum_probs=216.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.++.++.+|++++++++++++++.+++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~---~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   77 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDH---GDNVLGIVGDVRSLEDQKQAASRCVARF   77 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeeEEecccccHHHHHHHHHHHHHHh
Confidence            4689999999999999999999999999999999999998887766654   5679999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCC----cCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAAD----LLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      |++|++|||||.......    ..+.+.++|++++++|+.+++.++|+++|+|+ ++++||+++|..+..+.++.+.|++
T Consensus        78 g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~a  157 (276)
T d1bdba_          78 GKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTA  157 (276)
T ss_dssp             SCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHH
T ss_pred             CCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHH
Confidence            999999999997643322    24455667999999999999999999999995 5689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc--------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL--------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLAS  234 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s  234 (255)
                      ||+|+.+|+|+++.|++++||||+|+||+++|+|.....        ..++..+......|++|+.+|+|+|++++||++
T Consensus       158 sKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peeva~~v~fL~S  237 (276)
T d1bdba_         158 AKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIGRMPEVEEYTGAYVFFAT  237 (276)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTSSCCCGGGGSHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCCCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999854322        223456777888999999999999999999998


Q ss_pred             C-CCCCccccEEeeCCCccCC
Q 025259          235 D-DASYITGETLVVAGGMASR  254 (255)
Q Consensus       235 ~-~~~~~~G~~i~~dgG~~~~  254 (255)
                      + ++.++|||+|.+|||+++|
T Consensus       238 ~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         238 RGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHHHTTCSSCEEEESSSGGGC
T ss_pred             CcccCCeeCcEEEECcChhhc
Confidence            5 6899999999999999865

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-54  Score=363.80  Aligned_cols=244  Identities=29%  Similarity=0.416  Sum_probs=222.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-----CCeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-----GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++++.     +.++.++.||+++++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            4589999999999999999999999999999999999999999999998753     56899999999999999999999


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhh
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      +.+++|++|+||||||... ..++.+.+.++|++++++|+.++++++|+++|+|+  +.++||++|+ .+..+.++...|
T Consensus        88 ~~~~~G~iDiLVnnAg~~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y  165 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQF-LSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHS  165 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHH
T ss_pred             HHHHhCCeEEEEeeccccc-cCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccc
Confidence            9999999999999999875 78899999999999999999999999999999985  4567888765 456778899999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC--CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG--NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~  237 (255)
                      +++|+|+++|+|+++.|+++ |||||+|+||+++|++......  .++..+......|++|+.+|+|||+++.||+|+++
T Consensus       166 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedvA~~v~fL~Sd~s  245 (297)
T d1yxma1         166 GAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVSSVVCFLLSPAA  245 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHHHHHHHHHSGGG
T ss_pred             hhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999 9999999999999998765433  23445666677899999999999999999999999


Q ss_pred             CCccccEEeeCCCccC
Q 025259          238 SYITGETLVVAGGMAS  253 (255)
Q Consensus       238 ~~~~G~~i~~dgG~~~  253 (255)
                      .++|||+|.+|||+++
T Consensus       246 ~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         246 SFITGQSVDVDGGRSL  261 (297)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             cCcCCcEEEeCcChhh
Confidence            9999999999999875

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=1.2e-54  Score=354.20  Aligned_cols=238  Identities=29%  Similarity=0.457  Sum_probs=213.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+   +.+.++.+++||++++++++++++++.+++|
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~---~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g   78 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA---ALEAEAIAVVADVSDPKAVEAVFAEALEEFG   78 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---TCCSSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH---HcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            6899999999999999999999999999999999999987765544   4577899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|++|||||... ..++.+.+.++|++++++|+.+++.+.|++.|+|++.+.|+++||. +..+.+++..|+++|+|++
T Consensus        79 ~iDiLinnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~-a~~~~~~~~~Y~~sK~al~  156 (241)
T d2a4ka1          79 RLHGVAHFAGVAH-SALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSV-AGLGAFGLAHYAAGKLGVV  156 (241)
T ss_dssp             CCCEEEEGGGGTT-TTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCC-TTCCHHHHHHHHHCSSHHH
T ss_pred             CccEecccccccc-ccchhhhhccccccccccccccccccccccccccccccceeecccc-ccccccCccccchhhHHHH
Confidence            9999999999875 7899999999999999999999999999999999877777766665 4455578899999999999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEee
Q 025259          169 GLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVV  247 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~  247 (255)
                      +|++++++|+++ |||||+|+||+++|+|....  +++..+......|.+++.+|+|||+++.||+|++++++||++|.+
T Consensus       157 ~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~--~~~~~~~~~~~~p~~r~~~p~dva~~v~fL~S~~s~~itG~~i~v  234 (241)
T d2a4ka1         157 GLARTLALELARKGVRVNVLLPGLIQTPMTAGL--PPWAWEQEVGASPLGRAGRPEEVAQAALFLLSEESAYITGQALYV  234 (241)
T ss_dssp             HHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS--CHHHHHHHHHTSTTCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEE
T ss_pred             HHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh--hHhHHHHHHhCCCCCCCcCHHHHHHHHHHHhcchhCCCcCceEEe
Confidence            999999999999 99999999999999998654  456677778889999999999999999999999999999999999


Q ss_pred             CCCccC
Q 025259          248 AGGMAS  253 (255)
Q Consensus       248 dgG~~~  253 (255)
                      |||+++
T Consensus       235 DGG~s~  240 (241)
T d2a4ka1         235 DGGRSI  240 (241)
T ss_dssp             STTTTT
T ss_pred             CCCccc
Confidence            999874

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=2.7e-54  Score=356.06  Aligned_cols=243  Identities=29%  Similarity=0.513  Sum_probs=223.7

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEE-eCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVIS-SRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +.|+||++|||||++|||+++|++|+++|++|+++ .|+++.++++.+++++.+.++++++||++++++++++++++.++
T Consensus         2 ~~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (259)
T d1ja9a_           2 KPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH   81 (259)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHH
Confidence            56999999999999999999999999999999886 55667788999999999999999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-CCCCChhhHHhHH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-PPSAMAMYGVTKT  165 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-~~~~~~~y~~sKa  165 (255)
                      +|++|++|||||... ..++.+.+.++|++.+++|+.++++++|++.|+|++++++++++|..+.. +.+++..|+++|+
T Consensus        82 ~g~idilinnag~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~  160 (259)
T d1ja9a_          82 FGGLDFVMSNSGMEV-WCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKA  160 (259)
T ss_dssp             HSCEEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHH
T ss_pred             cCCCcEEEecccccc-ccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHH
Confidence            999999999999875 88899999999999999999999999999999998888888888876654 7889999999999


Q ss_pred             HHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc-----------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          166 ALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL-----------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       166 a~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      |+++|+|+++.|+++ |||||+|+||+++|+|.+...           +.++..+......|++|+.+|+|||++++||+
T Consensus       161 al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~eVa~~v~fL~  240 (259)
T d1ja9a_         161 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLKRIGYPADIGRAVSALC  240 (259)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHh
Confidence            999999999999999 999999999999999875432           12456777888999999999999999999999


Q ss_pred             CCCCCCccccEEeeCCCc
Q 025259          234 SDDASYITGETLVVAGGM  251 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~  251 (255)
                      |++++++||++|.+|||.
T Consensus       241 S~~a~~itG~~i~vDGG~  258 (259)
T d1ja9a_         241 QEESEWINGQVIKLTGGG  258 (259)
T ss_dssp             SGGGTTCCSCEEEESTTC
T ss_pred             CchhcCCcCceEEeCCCC
Confidence            999999999999999995

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.6e-53  Score=351.73  Aligned_cols=247  Identities=25%  Similarity=0.440  Sum_probs=223.6

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      ...+|+||++|||||++|||++++++|+++|++|++++|+ ++.++++.+++++.+.++.++.||++++++++++++++.
T Consensus        12 ~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~   91 (272)
T d1g0oa_          12 QSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAV   91 (272)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHH
Confidence            3457999999999999999999999999999999999887 567788899999999999999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-CCCCCChhhHHh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-QPPSAMAMYGVT  163 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-~~~~~~~~y~~s  163 (255)
                      +.+|++|++|||+|... ..++.+.+.++|++++++|+.+++.+.|++.|+|++++++++++|..+. .+.++...|+++
T Consensus        92 ~~~g~idilV~nag~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~as  170 (272)
T d1g0oa_          92 KIFGKLDIVCSNSGVVS-FGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGS  170 (272)
T ss_dssp             HHHSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHH
T ss_pred             HHhCCCCccccccccch-hhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHH
Confidence            99999999999999875 7889999999999999999999999999999999989999999988765 457778889999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----------HH-HHHHhhccCCCCCCCChHHHHHHHHH
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----------DA-VRKALEGKTLLNRLGTTGNMAAAIAF  231 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~~~~va~~~~~  231 (255)
                      |+|+++|+|+++.|+++ |||||+|+||+++|++.......          ++ .........|++|+.+|+|||+++.|
T Consensus       171 Kaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~peevA~~v~f  250 (272)
T d1g0oa_         171 KGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCF  250 (272)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHHHHHHHHH
Confidence            99999999999999999 99999999999999987553221          11 22345677899999999999999999


Q ss_pred             hcCCCCCCccccEEeeCCCccC
Q 025259          232 LASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       232 l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      |++++++++||++|.+|||.++
T Consensus       251 L~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         251 LASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHSGGGTTCCSCEEEESTTCCC
T ss_pred             HhCchhcCccCceEeECCCCCC
Confidence            9999999999999999999875

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=3.6e-54  Score=353.81  Aligned_cols=235  Identities=25%  Similarity=0.338  Sum_probs=214.9

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      .|+|||||++|||+++|++|+++|++|++++|+.+.++++.+.....      ..+|++++++++++++++.++||++|+
T Consensus         1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~------~~~dv~~~~~~~~~~~~~~~~~G~iDi   74 (252)
T d1zmta1           1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETY------PQLKPMSEQEPAELIEAVTSAYGQVDV   74 (252)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHC------TTSEECCCCSHHHHHHHHHHHHSCCCE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcE------EEeccCCHHHHHHHHHHHHHHcCCCCE
Confidence            37999999999999999999999999999999998887776544332      368999999999999999999999999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHH
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGL  170 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l  170 (255)
                      ||||||......++.+.+.++|++.+++|+.++++++|++.|+|+  +.|+||++||..+..+.++...|++||+|+++|
T Consensus        75 LVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          75 LVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             EEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHH
Confidence            999999865467899999999999999999999999999999995  568999999999999999999999999999999


Q ss_pred             HHHHHHHhCC-CcEEEEEeCCcccChhhhhhc------CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcccc
Q 025259          171 TKALAAEMAP-DTRVNCVAPGFVPTHFAQALL------GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGE  243 (255)
Q Consensus       171 ~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~  243 (255)
                      +|+++.|+++ |||||+|+||+++|++.....      ..++..+......|++|+.+|+|||+++.||+|++++|+|||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v~fL~S~~s~~iTG~  234 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELGELVAFLASGSCDYLTGQ  234 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHHHHHHHHHTTSCGGGTTC
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcCCcCC
Confidence            9999999999 999999999999999865432      345667778889999999999999999999999999999999


Q ss_pred             EEeeCCCccC
Q 025259          244 TLVVAGGMAS  253 (255)
Q Consensus       244 ~i~~dgG~~~  253 (255)
                      +|.+|||+++
T Consensus       235 ~i~vdGG~~~  244 (252)
T d1zmta1         235 VFWLAGGFPM  244 (252)
T ss_dssp             EEEESTTCCC
T ss_pred             eEEECCCcee
Confidence            9999999985

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=2.1e-52  Score=339.59  Aligned_cols=227  Identities=30%  Similarity=0.488  Sum_probs=205.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.+++       .+.  .++.||+++.      ++.+.+++|+
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~-------~~~--~~~~~Dv~~~------~~~~~~~~g~   66 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------SGH--RYVVCDLRKD------LDLLFEKVKE   66 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------TCS--EEEECCTTTC------HHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh-------cCC--cEEEcchHHH------HHHHHHHhCC
Confidence            689999999999999999999999999999999999865543       333  3577999863      4556678899


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +|+||||||... ..++.+.+.++|++.+++|+.+++.++|+++|+|+  +.++||+++|..+..+.++...|++||+|+
T Consensus        67 iD~lVnnAG~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal  145 (234)
T d1o5ia_          67 VDILVLNAGGPK-AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMAL  145 (234)
T ss_dssp             CSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             CcEEEecccccC-CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHH
Confidence            999999999865 78899999999999999999999999999999995  558999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      .+|+|+++.|+++ |||||+|+||+++|++.....+ ++..+......|++|+.+|||||++++||+|++++++|||+|.
T Consensus       146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~-~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~~s~~itG~~i~  224 (234)
T d1o5ia_         146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS-EEKKKQVESQIPMRRMAKPEEIASVVAFLCSEKASYLTGQTIV  224 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSC-HHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEE
T ss_pred             HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcC-HHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhcCCcCcEEE
Confidence            9999999999999 9999999999999999877653 4556778888999999999999999999999999999999999


Q ss_pred             eCCCccC
Q 025259          247 VAGGMAS  253 (255)
Q Consensus       247 ~dgG~~~  253 (255)
                      +|||++.
T Consensus       225 vDGG~s~  231 (234)
T d1o5ia_         225 VDGGLSK  231 (234)
T ss_dssp             ESTTCCC
T ss_pred             ECccccc
Confidence            9999874

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-52  Score=341.43  Aligned_cols=241  Identities=25%  Similarity=0.368  Sum_probs=214.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      |.+|+||++|||||++|||+++|+.|+++|++|++++|+++.++++.+++++.+  .++.+++||++++++++++++.+.
T Consensus         5 M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~   84 (257)
T d1xg5a_           5 MERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIR   84 (257)
T ss_dssp             CGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            467999999999999999999999999999999999999999999999999874  589999999999999999999999


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc----CCCeEEEEcCcCccCC--CCCCh
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ----KGSSVVFISSIAGYQP--PSAMA  158 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~----~~~~iv~vss~~~~~~--~~~~~  158 (255)
                      +++|++|+||||||... ..++.+.+.++|++.+++|+.+++.+.+++.|+|+    ++++||++||..+...  .+...
T Consensus        85 ~~~g~iD~lVnnAg~~~-~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~  163 (257)
T d1xg5a_          85 SQHSGVDICINNAGLAR-PDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTH  163 (257)
T ss_dssp             HHHCCCSEEEECCCCCC-CCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGH
T ss_pred             HhcCCCCEEEecccccC-CCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccH
Confidence            99999999999999875 78999999999999999999999999999999874    3589999999998754  45677


Q ss_pred             hhHHhHHHHHHHHHHHHHHh--CC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          159 MYGVTKTALLGLTKALAAEM--AP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       159 ~y~~sKaa~~~l~~~la~e~--~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      .|+++|+|+.+|+|+++.|+  ++ +||||+|+||+++|++.......  ..+......|.+++.+|+|||++++||+++
T Consensus       164 ~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~--~~~~~~~~~~~~r~~~pedvA~~v~fL~s~  241 (257)
T d1xg5a_         164 FYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDK--DPEKAAATYEQMKCLKPEDVAEAVIYVLST  241 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTT--CHHHHHHHHC---CBCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChh--hHHHHHhcCCCCCCcCHHHHHHHHHHHhCC
Confidence            79999999999999999998  56 99999999999999998766433  234556667899999999999999999999


Q ss_pred             CCCCccccEEeeCCC
Q 025259          236 DASYITGETLVVAGG  250 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG  250 (255)
                      +++++|||++.-++|
T Consensus       242 ~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         242 PAHIQIGDIQMRPTG  256 (257)
T ss_dssp             CTTEEEEEEEEEETT
T ss_pred             hhcCeECCEEEEeCC
Confidence            999999997544444

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-53  Score=346.37  Aligned_cols=234  Identities=28%  Similarity=0.416  Sum_probs=210.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++.+.  +.++.+++||++++++++++++++.+++
T Consensus         1 i~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (254)
T d2gdza1           1 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   80 (254)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            36999999999999999999999999999999999999999999988764  4689999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCCChhhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      |++|+||||||...         .++|++++++|+.+++.+.+.++|+|++     .++||++||..+..+.++.++|++
T Consensus        81 G~iDilVnnAg~~~---------~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          81 GRLDILVNNAGVNN---------EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             SCCCEEEECCCCCC---------SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCcCeecccccccc---------cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            99999999999864         1348999999999999999999999852     368999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHhCC-CcEEEEEeCCcccChhhhhhcCCH------HHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          163 TKTALLGLTKA--LAAEMAP-DTRVNCVAPGFVPTHFAQALLGND------AVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       163 sKaa~~~l~~~--la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ||+|+.+|+|+  |+.|+++ |||||+|+||+++|+|........      +..+......|++++.+|+|||++++||+
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~fL~  231 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPLIANGLITLI  231 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence            99999999997  6889998 999999999999999987654432      23455666778899999999999999999


Q ss_pred             CCCCCCccccEEeeCCCccCC
Q 025259          234 SDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       234 s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++  ++||++|.||||..++
T Consensus       232 s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         232 EDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HCT--TCSSCEEEEETTTEEE
T ss_pred             cCC--CCCCCEEEECCCCeee
Confidence            864  5999999999998765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=1.3e-51  Score=335.87  Aligned_cols=227  Identities=23%  Similarity=0.300  Sum_probs=209.4

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe-------EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGAS-------VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~-------Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +++|||||++|||+++|++|+++|++       |++++|+++.++++.+++++.+.++.++.||++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            35899999999999999999999998       89999999999999999999999999999999999999999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++|++|+||||||... ..++.+.+.++|++++++|++|++.++|+++|+|+  +.|+||++||..+..+.++.+.|++|
T Consensus        82 ~~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~as  160 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGR-FGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMS  160 (240)
T ss_dssp             HTSCCSEEEECCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             HcCCcceeeccccccc-CCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHH
Confidence            9999999999999875 78999999999999999999999999999999995  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+.+|+++++.|+++ |||||+|+||+++|+|.......           ...++.+|||||+.++||+++.+++++|
T Consensus       161 K~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~-----------~~~~~~~PedvA~~v~~l~s~~~~~~~~  229 (240)
T d2bd0a1         161 KFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE-----------MQALMMMPEDIAAPVVQAYLQPSRTVVE  229 (240)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST-----------TGGGSBCHHHHHHHHHHHHTSCTTEEEE
T ss_pred             HHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh-----------hHhcCCCHHHHHHHHHHHHcCCccCccC
Confidence            99999999999999999 99999999999999997654321           1245789999999999999998888888


Q ss_pred             c-EEeeCCCc
Q 025259          243 E-TLVVAGGM  251 (255)
Q Consensus       243 ~-~i~~dgG~  251 (255)
                      + ++.++||-
T Consensus       230 ~~~i~p~~G~  239 (240)
T d2bd0a1         230 EIILRPTSGD  239 (240)
T ss_dssp             EEEEEETTCC
T ss_pred             CEEEEecCCC
Confidence            7 56688873

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=8.1e-51  Score=341.22  Aligned_cols=244  Identities=27%  Similarity=0.390  Sum_probs=220.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+|+||++|||||++|||+++|++|+++|++|++++|+.+.+++..+++... +.++.++.||++++++++.+++.+.++
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            4899999999999999999999999999999999999999999988888654 778999999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      ++++|++|||||... ..++.+.+.++|++.+.+|+.+.+.+.+...+.+.   ..+.+++++|..+..+.++..+|+++
T Consensus       101 ~g~iDilvnnAg~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysas  179 (294)
T d1w6ua_         101 AGHPNIVINNAAGNF-ISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASA  179 (294)
T ss_dssp             TCSCSEEEECCCCCC-CSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             ccccchhhhhhhhcc-ccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHH
Confidence            999999999999875 77899999999999999999999999998887653   45678889999889999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      |+|+++|+|++|.|+++ |||||+|+||+++|++...... .+...+......|++++.+|+|||+++.||++++++++|
T Consensus       180 Kaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~sd~s~~it  259 (294)
T d1w6ua_         180 KAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEELANLAAFLCSDYASWIN  259 (294)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHHHHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHHHHHHHHHhCchhcCCC
Confidence            99999999999999999 9999999999999999866543 445678888899999999999999999999999999999


Q ss_pred             ccEEeeCCCcc
Q 025259          242 GETLVVAGGMA  252 (255)
Q Consensus       242 G~~i~~dgG~~  252 (255)
                      |++|.+|||.+
T Consensus       260 G~~i~vDGG~~  270 (294)
T d1w6ua_         260 GAVIKFDGGEE  270 (294)
T ss_dssp             SCEEEESTTHH
T ss_pred             CcEEEECCChh
Confidence            99999999975

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-51  Score=335.58  Aligned_cols=237  Identities=27%  Similarity=0.434  Sum_probs=209.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |.+|+||++|||||++|||+++++.|+++|++|++++|+++.+++..+     ...+....+|+.+.+.++..    .+.
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~-----~~~~~~~~~d~~~~~~~~~~----~~~   71 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK-----YPGIQTRVLDVTKKKQIDQF----ANE   71 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG-----STTEEEEECCTTCHHHHHHH----HHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh-----ccCCceeeeecccccccccc----ccc
Confidence            356999999999999999999999999999999999999887765433     23467788999887765554    456


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCcc-CCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGY-QPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~-~~~~~~~~y~~s  163 (255)
                      ++++|+||||+|... .+++.+.+.++|++.+++|+.+++.++|++.|+|.  +.++||+++|..+. .+.++..+|+++
T Consensus        72 ~~~id~lVn~ag~~~-~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~s  150 (245)
T d2ag5a1          72 VERLDVLFNVAGFVH-HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTT  150 (245)
T ss_dssp             CSCCSEEEECCCCCC-CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             cccceeEEecccccC-CCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHH
Confidence            789999999999876 78899999999999999999999999999999884  56899999998775 578889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhc----CCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALL----GNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      |+|+++|+|++|.|+++ |||||+|+||+++|++.....    ......+......|++|+.+|+|||+++.||+++++.
T Consensus       151 Kaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~~v~fL~s~~s~  230 (245)
T d2ag5a1         151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAMLCVYLASDESA  230 (245)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhChhhC
Confidence            99999999999999999 999999999999999876432    2344567777889999999999999999999999999


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++||++|.+|||+++
T Consensus       231 ~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         231 YVTGNPVIIDGGWSL  245 (245)
T ss_dssp             TCCSCEEEECTTGGG
T ss_pred             CCcCceEEeCCCcCC
Confidence            999999999999974

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=7.4e-50  Score=335.47  Aligned_cols=230  Identities=22%  Similarity=0.339  Sum_probs=204.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC---------hhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK---------QKNVDKAVEKLKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+         .+.+++..+++...+   ....+|+++.+++++
T Consensus         3 m~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~~~~   79 (302)
T d1gz6a_           3 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---GKAVANYDSVEAGEK   79 (302)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---CEEEEECCCGGGHHH
T ss_pred             cCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcc---cccccccchHHHHHH
Confidence            57999999999999999999999999999999998664         455677777776654   345789999999999


Q ss_pred             HHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSA  156 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~  156 (255)
                      +++++.+++|++|+||||||+.. ..++.+.+.++|++++++|+.+++.++|+++|+|+  +.|+||++||..+..+.++
T Consensus        80 ~v~~~~~~~G~iDiLVnNAGi~~-~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~  158 (302)
T d1gz6a_          80 LVKTALDTFGRIDVVVNNAGILR-DRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFG  158 (302)
T ss_dssp             HHHHHHHHTSCCCEEEECCCCCC-CCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTT
T ss_pred             HHHHHHHHcCCCCEEEECCccCC-CCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCC
Confidence            99999999999999999999876 78999999999999999999999999999999995  5689999999999999999


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCC
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~  235 (255)
                      ...|++||+|+.+|+++++.|+++ |||||+|+||++.|++....  +++.          .+..+|||||++++||+|+
T Consensus       159 ~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~--~~~~----------~~~~~PedvA~~v~fL~S~  226 (302)
T d1gz6a_         159 QANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM--PEDL----------VEALKPEYVAPLVLWLCHE  226 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS--CHHH----------HHHSCGGGTHHHHHHHTST
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC--cHhh----------HhcCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999 99999999999988765433  2222          2345799999999999997


Q ss_pred             CCCCccccEEeeCCCccCC
Q 025259          236 DASYITGETLVVAGGMASR  254 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~~~~  254 (255)
                      .+ ++||++|.+|||+..|
T Consensus       227 ~a-~itG~~i~vdGG~~~~  244 (302)
T d1gz6a_         227 SC-EENGGLFEVGAGWIGK  244 (302)
T ss_dssp             TC-CCCSCEEEEETTEEEE
T ss_pred             Cc-CCCCcEEEeCCCceeE
Confidence            65 7899999999998644

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.4e-48  Score=317.50  Aligned_cols=239  Identities=23%  Similarity=0.269  Sum_probs=212.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGL---EGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~---~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ..|+||+++||||++|||+++|++|++   +|++|++++|+++.++++.++++..  +.++.+++||++++++++++++.
T Consensus         2 ~~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~   81 (259)
T d1oaaa_           2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHH
Confidence            368999999999999999999999996   7999999999999999999999764  56899999999999999999999


Q ss_pred             HHHH----cCCCcEEEECCCCCC--CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCC----CeEEEEcCcCccC
Q 025259           83 TVEK----YGRIDVFVLNAAVNP--YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKG----SSVVFISSIAGYQ  152 (255)
Q Consensus        83 ~~~~----~g~~d~lv~~ag~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~----~~iv~vss~~~~~  152 (255)
                      +.+.    ++.+|++|||||...  ...++.+.++++|++++++|+.++++++|++.|+|++.    ++||++||..+..
T Consensus        82 ~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~  161 (259)
T d1oaaa_          82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ  161 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS
T ss_pred             HHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccC
Confidence            8773    357899999999753  24568899999999999999999999999999999743    5899999999999


Q ss_pred             CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh---cCCHHHHHHhhccCCCCCCCChHHHHHHH
Q 025259          153 PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL---LGNDAVRKALEGKTLLNRLGTTGNMAAAI  229 (255)
Q Consensus       153 ~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (255)
                      +.+++..|++||+|+++|+++|+.| .+|||||+|+||+++|+|....   ..+++..+.+....+.+++.+|+|+|+.+
T Consensus       162 ~~~~~~~Y~asKaal~~lt~~la~e-~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~evA~~i  240 (259)
T d1oaaa_         162 PYKGWGLYCAGKAARDMLYQVLAAE-EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSDGALVDCGTSAQKL  240 (259)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHH-CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHTTCSBCHHHHHHHH
T ss_pred             CCccchHHHHHHHHHHHHHHHHHhC-CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence            9999999999999999999999999 4599999999999999987643   23456666777777889999999999999


Q ss_pred             HHhcCCCCCCccccEEeeC
Q 025259          230 AFLASDDASYITGETLVVA  248 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~d  248 (255)
                      ++|+++ ..++||++|.+.
T Consensus       241 ~~ll~~-~s~~TG~~idv~  258 (259)
T d1oaaa_         241 LGLLQK-DTFQSGAHVDFY  258 (259)
T ss_dssp             HHHHHH-CCSCTTEEEETT
T ss_pred             HHHhhh-ccCCCCCeEEec
Confidence            999976 469999999874

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-47  Score=316.44  Aligned_cols=243  Identities=21%  Similarity=0.302  Sum_probs=218.4

Q ss_pred             cCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++..+.. +++.....+...+.+|+++..++...++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRV-EEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHH-HHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            48999999999999  899999999999999999999997655554 444444456778899999999999999999999


Q ss_pred             cCCCcEEEECCCCCCCCCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhH
Q 025259           87 YGRIDVFVLNAAVNPYAAD-----LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYG  161 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~-----~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~  161 (255)
                      ++++|++|||++... ...     ......+.|...+.+|+.+.+.+.+++.+.+++++.||++||..+..+.+....|+
T Consensus        81 ~~~~d~~v~~a~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~  159 (258)
T d1qsga_          81 WPKFDGFVHSIGFAP-GDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG  159 (258)
T ss_dssp             CSSEEEEEECCCCCC-GGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHH
T ss_pred             ccccceEEEeecccc-cccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHH
Confidence            999999999999764 222     23566677999999999999999999999998888899999999999999999999


Q ss_pred             HhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCc
Q 025259          162 VTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYI  240 (255)
Q Consensus       162 ~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~  240 (255)
                      +||+|+++|+|+++.|+++ |||||+|+||+++|++...........+......|++|+.+|||||+++.||++++++++
T Consensus       160 ~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeia~~v~fL~s~~s~~i  239 (258)
T d1qsga_         160 LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIEDVGNSAAFLCSDLSAGI  239 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHHHHHHHHHHHhCchhcCc
Confidence            9999999999999999999 999999999999999988776667777888889999999999999999999999999999


Q ss_pred             cccEEeeCCCccC
Q 025259          241 TGETLVVAGGMAS  253 (255)
Q Consensus       241 ~G~~i~~dgG~~~  253 (255)
                      ||++|.+|||+++
T Consensus       240 tG~~i~vDGG~~i  252 (258)
T d1qsga_         240 SGEVVHVDGGFSI  252 (258)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCceEEECcCHHH
Confidence            9999999999875

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1.1e-48  Score=321.12  Aligned_cols=235  Identities=15%  Similarity=0.192  Sum_probs=199.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCC-CHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVS-NEQHRKNLIDKTVE   85 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~-~~~~~~~~~~~~~~   85 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+..++..+..... +.++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            4799999999999999999999999999999999988877766554433333 458999999998 67889999999999


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-----CCeEEEEcCcCccCCCCCChhh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-----GSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-----~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      ++|++|+||||||...         +++|++++++|+.|++.++++++|+|.+     .++||+++|..+..+.+++..|
T Consensus        81 ~~g~iDilvnnAG~~~---------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y  151 (254)
T d1sbya1          81 QLKTVDILINGAGILD---------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HHSCCCEEEECCCCCC---------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             HcCCCCEEEeCCCCCC---------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHH
Confidence            9999999999999642         4668999999999999999999999842     4789999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASY  239 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~  239 (255)
                      ++||+|+.+|+++++.|+++ |||||+|+||+|+|+|.+......+..+.........+..+||++|+.++++.+.   .
T Consensus       152 ~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~~~~~~---~  228 (254)
T d1sbya1         152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEA---N  228 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHHHhhhC---C
Confidence            99999999999999999998 9999999999999999776544333222333333445677899999998888753   3


Q ss_pred             ccccEEeeCCCccCC
Q 025259          240 ITGETLVVAGGMASR  254 (255)
Q Consensus       240 ~~G~~i~~dgG~~~~  254 (255)
                      .||++|.+|||.+.+
T Consensus       229 ~tG~vi~vdgG~l~~  243 (254)
T d1sbya1         229 KNGAIWKLDLGTLEA  243 (254)
T ss_dssp             CTTCEEEEETTEEEE
T ss_pred             CCCCEEEECCCEeCc
Confidence            599999999997643

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-47  Score=311.50  Aligned_cols=216  Identities=23%  Similarity=0.343  Sum_probs=197.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++|+||++|||||++|||+++|++|+++|++|++++|++++++++.+++++.+.+++++.||++|+++++.+++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            57999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHhHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVTKT  165 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~sKa  165 (255)
                      |++|++|||||... ..++.+.+.++|++++++|+.|+++++++++|+|+  +.|+||++||..+..+.++++.|++||+
T Consensus        83 g~idilinnag~~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKa  161 (244)
T d1yb1a_          83 GDVSILVNNAGVVY-TSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKF  161 (244)
T ss_dssp             CCCSEEEECCCCCC-CCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHH
T ss_pred             CCCceeEeeccccc-cccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHH
Confidence            99999999999886 77888999999999999999999999999999995  4578999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCC----CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCC
Q 025259          166 ALLGLTKALAAEMAP----DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDD  236 (255)
Q Consensus       166 a~~~l~~~la~e~~~----~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~  236 (255)
                      |+.+|+++|+.|+++    ||+||+|+||+|+|+|.+...            .+..+..+|+++|+.+...+...
T Consensus       162 al~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~~------------~~~~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         162 AAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS------------TSLGPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCTH------------HHHCCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCcC------------ccccCCCCHHHHHHHHHHHHhcC
Confidence            999999999999753    799999999999999875421            12345779999999988766443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-46  Score=307.20  Aligned_cols=233  Identities=24%  Similarity=0.385  Sum_probs=201.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++||||++|||||++|||+++|++|+++|++|++++|+++.+++..+++   +.+.....+|+.+.+.++..++.+...+
T Consensus         1 ~slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (248)
T d2o23a1           1 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL---GNNCVFAPADVTSEKDVQTALALAKGKF   77 (248)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh---CCCccccccccccccccccccccccccc
Confidence            4699999999999999999999999999999999999999988877766   5578889999999999999999999999


Q ss_pred             CCCcEEEECCCCCC-----CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--------CCCeEEEEcCcCccCCC
Q 025259           88 GRIDVFVLNAAVNP-----YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--------KGSSVVFISSIAGYQPP  154 (255)
Q Consensus        88 g~~d~lv~~ag~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--------~~~~iv~vss~~~~~~~  154 (255)
                      +.+|.+++|++...     ...+..+.+.++|++++++|+.++++++|++.|+|.        +.|+||++||..+..+.
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~  157 (248)
T d2o23a1          78 GRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQ  157 (248)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCC
T ss_pred             ccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCC
Confidence            99999999987643     123567788999999999999999999999999863        34689999999999999


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC-CCCCChHHHHHHHHHh
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL-NRLGTTGNMAAAIAFL  232 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  232 (255)
                      ++...|++||+|+++|+|+++.|+++ |||||+|+||+++|+|.....  ++..+......|+ +|+.+|||||+++.||
T Consensus       158 ~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~--~~~~~~~~~~~pl~~R~g~peevA~~v~fL  235 (248)
T d2o23a1         158 VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP--EKVCNFLASQVPFPSRLGDPAEYAHLVQAI  235 (248)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC------------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC--HHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999 999999999999999977653  3344455566665 8999999999999999


Q ss_pred             cCCCCCCccccEEee
Q 025259          233 ASDDASYITGETLVV  247 (255)
Q Consensus       233 ~s~~~~~~~G~~i~~  247 (255)
                      ++  ++|+|||+|.|
T Consensus       236 ~s--~~~itGq~I~v  248 (248)
T d2o23a1         236 IE--NPFLNGEVIRL  248 (248)
T ss_dssp             HH--CTTCCSCEEEE
T ss_pred             Hh--CCCCCceEeEC
Confidence            96  57999999986

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=1.2e-45  Score=307.83  Aligned_cols=236  Identities=28%  Similarity=0.369  Sum_probs=197.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC-hhHHHHHHHHHHHc-CCeEEEE-----------------EecCCCH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRK-QKNVDKAVEKLKAL-GIEVIGI-----------------ICHVSNE   73 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~-----------------~~D~~~~   73 (255)
                      .++|||||++|||+++|++|+++|++|++++++ ++..+++.+++++. +.....+                 .+|++++
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            478999999999999999999999999987665 56677888888764 3344444                 5569999


Q ss_pred             HHHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHH--------------HHHHHHhHHHHHHHHHHHhcc---
Q 025259           74 QHRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD--------------KLWEINVKSSILLMQDAAPHM---  136 (255)
Q Consensus        74 ~~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~~~~~~~~~l---  136 (255)
                      ++++++++++.+++|++|+||||||... ..++.+.+.++|+              ..+.+|+.+++.+.|.+.+.+   
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~  161 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFY-PTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT  161 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCC-CCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccC-CCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence            9999999999999999999999999875 6677777666654              478999999999999988753   


Q ss_pred             ---c--CCCeEEEEcCcCccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHh
Q 025259          137 ---Q--KGSSVVFISSIAGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKAL  210 (255)
Q Consensus       137 ---~--~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~  210 (255)
                         +  ..++||+++|.....+.++..+|++||+|+++|+|+++.|+++ |||||+|+||++.+...    ..++..+..
T Consensus       162 ~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~----~~~~~~~~~  237 (284)
T d1e7wa_         162 PAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD----MPPAVWEGH  237 (284)
T ss_dssp             CGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG----SCHHHHHHH
T ss_pred             HHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc----CCHHHHHHH
Confidence               2  2357999999999999999999999999999999999999999 99999999998665432    144566677


Q ss_pred             hccCCC-CCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          211 EGKTLL-NRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       211 ~~~~~~-~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ....|+ +|+.+|+|||+++.||+|+++.|+||++|.+|||+++
T Consensus       238 ~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl  281 (284)
T d1e7wa_         238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL  281 (284)
T ss_dssp             HTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhc
Confidence            777775 8999999999999999999999999999999999985

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.8e-46  Score=319.10  Aligned_cols=243  Identities=19%  Similarity=0.175  Sum_probs=204.8

Q ss_pred             CCCEEEEeC--CCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc------------CCeEEEEE---------
Q 025259           11 QGKVAVVTA--STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL------------GIEVIGII---------   67 (255)
Q Consensus        11 ~~k~vlVtG--~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------------~~~~~~~~---------   67 (255)
                      .+|++||||  +++|||+++|++|+++|++|++++++..............            ........         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  5579999999999999999999999876554443332211            11122333         


Q ss_pred             -----------ecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC-CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhc
Q 025259           68 -----------CHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNPY-AADLLKTKESVLDKLWEINVKSSILLMQDAAPH  135 (255)
Q Consensus        68 -----------~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~  135 (255)
                                 +|++++++++++++.+.+.+|++|+||||+|.... .+++.+.+.++|++.+++|+++++.++|++.|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       36678888999999999999999999999997642 357889999999999999999999999999999


Q ss_pred             ccCCCeEEEEcCcCccCCCCC-ChhhHHhHHHHHHHHHHHHHHhCC--CcEEEEEeCCcccChhhhhh------------
Q 025259          136 MQKGSSVVFISSIAGYQPPSA-MAMYGVTKTALLGLTKALAAEMAP--DTRVNCVAPGFVPTHFAQAL------------  200 (255)
Q Consensus       136 l~~~~~iv~vss~~~~~~~~~-~~~y~~sKaa~~~l~~~la~e~~~--~i~v~~v~pg~v~t~~~~~~------------  200 (255)
                      |+++++||++||..+..+.|+ ...|+++|+|+++|+|+++.|+++  |||||+|+||+++|++....            
T Consensus       161 m~~~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~~~~  240 (329)
T d1uh5a_         161 MKPQSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENNTN  240 (329)
T ss_dssp             EEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC-----------
T ss_pred             cccccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhhhhh
Confidence            998899999999999988876 567999999999999999999975  99999999999999543321            


Q ss_pred             -------------------------------cCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          201 -------------------------------LGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       201 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                                                     ...+...+......|++|+.+|+|||++++||+|+.++++|||+|.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~i~VDG  320 (329)
T d1uh5a_         241 QNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQTIYVDN  320 (329)
T ss_dssp             -------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred             hhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCeEEECC
Confidence                                           1123456777788899999999999999999999999999999999999


Q ss_pred             CccC
Q 025259          250 GMAS  253 (255)
Q Consensus       250 G~~~  253 (255)
                      |++.
T Consensus       321 G~~~  324 (329)
T d1uh5a_         321 GLNI  324 (329)
T ss_dssp             TGGG
T ss_pred             Cccc
Confidence            9974

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=1.8e-45  Score=305.52  Aligned_cols=244  Identities=23%  Similarity=0.283  Sum_probs=214.1

Q ss_pred             cCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ +++..+++.+.+....+..+|++++++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            48999999999765  9999999999999999999999954 45556667676777888999999999999999999999


Q ss_pred             cCCCcEEEECCCCCCC---CCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           87 YGRIDVFVLNAAVNPY---AADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                      +|++|++|||+|....   ..+..+..++.+...+.++.++.+.+.+...+..++...|+++++.....+.+....|+++
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~as  160 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLA  160 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHH
Confidence            9999999999997642   2244456667777788888888888888888877666678888888778888889999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|++.......++.........|.+++.+|+|||+.+.||+|+.+.++||
T Consensus       161 K~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedIA~~v~fL~S~~s~~itG  240 (274)
T d2pd4a1         161 KAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSSGVSG  240 (274)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHHHHHHHHHHHhChhhCCCcC
Confidence            99999999999999999 99999999999999998877666777788888899999999999999999999999999999


Q ss_pred             cEEeeCCCccC
Q 025259          243 ETLVVAGGMAS  253 (255)
Q Consensus       243 ~~i~~dgG~~~  253 (255)
                      ++|.+|||++.
T Consensus       241 ~~i~vDGG~~~  251 (274)
T d2pd4a1         241 EVHFVDAGYHV  251 (274)
T ss_dssp             CEEEESTTGGG
T ss_pred             ceEEECCChhh
Confidence            99999999974

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.8e-46  Score=311.77  Aligned_cols=248  Identities=23%  Similarity=0.230  Sum_probs=207.4

Q ss_pred             ccccCCCCEEEEeCCCC--chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc---------C---CeEEEEEec--
Q 025259            6 MAKRFQGKVAVVTASTQ--GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL---------G---IEVIGIICH--   69 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~--giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~D--   69 (255)
                      |.++|+||++|||||+|  |||+++|++|+++|++|++++|++.............         .   ..-....+|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            56789999999999876  9999999999999999999999865443332222110         0   011223333  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCC-CCCCcCCCCHHHHHHHHHHHhHHHHHHHH
Q 025259           70 ------------------VSNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP-YAADLLKTKESVLDKLWEINVKSSILLMQ  130 (255)
Q Consensus        70 ------------------~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~~~~  130 (255)
                                        .++..+++++++++.++||++|+||||||... ...++.+.+.++|++.+++|+++++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              34556778999999999999999999999753 35678999999999999999999999999


Q ss_pred             HHHhcccCCCeEEEEcCcCccC-CCCCChhhHHhHHHHHHHHHHHHHHhC-C-CcEEEEEeCCcccChhhhhhcCCHHHH
Q 025259          131 DAAPHMQKGSSVVFISSIAGYQ-PPSAMAMYGVTKTALLGLTKALAAEMA-P-DTRVNCVAPGFVPTHFAQALLGNDAVR  207 (255)
Q Consensus       131 ~~~~~l~~~~~iv~vss~~~~~-~~~~~~~y~~sKaa~~~l~~~la~e~~-~-~i~v~~v~pg~v~t~~~~~~~~~~~~~  207 (255)
                      ++.+++++++.++.+++..... ..+....|+++|+++.++++.++.|++ + |||||+|+||+++|++.......++..
T Consensus       162 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~  241 (297)
T d1d7oa_         162 HFLPIMNPGGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFIDTMI  241 (297)
T ss_dssp             HHGGGEEEEEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHHHHH
T ss_pred             HHHHHhhcCCcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCHHHH
Confidence            9999998888888877776654 446777899999999999999999996 5 999999999999999987655556677


Q ss_pred             HHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          208 KALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       208 ~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +......|++|+.+|||||+++.||+|+.++++|||+|.+|||++.
T Consensus       242 ~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         242 EYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            8888889999999999999999999999999999999999999873

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=1.1e-43  Score=293.74  Aligned_cols=244  Identities=20%  Similarity=0.240  Sum_probs=206.6

Q ss_pred             cCCCCEEEEeCC--CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTAS--TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~~k~vlVtG~--~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|+||++|||||  ++|||+++|++|+++|++|++++|+++++.+...  +..+.+...++||++++++++.+++.+.+.
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~--~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~   80 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRIT--DRLPAKAPLLELDVQNEEHLASLAGRVTEA   80 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHH--TTSSSCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHH--HHcCCceeeEeeecccccccccccchhhhc
Confidence            589999999994  5799999999999999999999999876533221  234667788999999999999999999876


Q ss_pred             c---CCCcEEEECCCCCC----CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChh
Q 025259           87 Y---GRIDVFVLNAAVNP----YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAM  159 (255)
Q Consensus        87 ~---g~~d~lv~~ag~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~  159 (255)
                      +   +++|++|||+|...    ...++.+.+.++|.+.+.+|+.+.+...+...+.+.+. .+++++|.....+.|.+..
T Consensus        81 ~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~~~~~~~p~~~~  159 (268)
T d2h7ma1          81 IGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPG-GSIVGMDFDPSRAMPAYNW  159 (268)
T ss_dssp             HCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEE-EEEEEEECCCSSCCTTTHH
T ss_pred             cccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccc-cccccccccccccCcccch
Confidence            4   56899999999753    23356789999999999999999999999999887543 4556666777788889999


Q ss_pred             hHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCC----------HHHHHHhhccCCCCC-CCChHHHHH
Q 025259          160 YGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGN----------DAVRKALEGKTLLNR-LGTTGNMAA  227 (255)
Q Consensus       160 y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~----------~~~~~~~~~~~~~~~-~~~~~~va~  227 (255)
                      |+++|+|+.+|+++++.|+++ |||||+|+||+++|++.......          +...+......|+++ +.+|+|||+
T Consensus       160 y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dva~  239 (268)
T d2h7ma1         160 MTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAK  239 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHHHH
T ss_pred             hhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            999999999999999999999 99999999999999987654432          223455556677765 999999999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCccCCC
Q 025259          228 AIAFLASDDASYITGETLVVAGGMASRL  255 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~~~~  255 (255)
                      ++.||+|+.+.++||++|.+|||++.+|
T Consensus       240 ~v~fL~Sd~a~~iTG~~i~vDGG~~~~~  267 (268)
T d2h7ma1         240 TVCALLSDWLPATTGDIIYADGGAHTQL  267 (268)
T ss_dssp             HHHHHHSSSCTTCCSEEEEESTTGGGCC
T ss_pred             HHHHHhCchhcCccCCEEEECcCccccc
Confidence            9999999999999999999999999875

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-44  Score=296.63  Aligned_cols=220  Identities=25%  Similarity=0.274  Sum_probs=193.5

Q ss_pred             CC-EEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GK-VAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k-~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      || ++|||||++|||+++|++|+++ |++|++++|+.+.+++..+++++.+.++.+++||++|.++++++++++.+++|+
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            45 4599999999999999999986 899999999999999999999999889999999999999999999999999999


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC----------------
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP----------------  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~----------------  153 (255)
                      +|+||||||+.. ..+..+.+.++|++++++|++|++.++++++|+|++.++||+++|..+..+                
T Consensus        82 iDiLVnNAGi~~-~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~  160 (275)
T d1wmaa1          82 LDVLVNNAGIAF-KVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSET  160 (275)
T ss_dssp             EEEEEECCCCCC-CTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSS
T ss_pred             cEEEEEcCCcCC-CCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccc
Confidence            999999999875 667788889999999999999999999999999998899999999765321                


Q ss_pred             -------------------------CCCChhhHHhHHHHHHHHHHHHHHhC----C-CcEEEEEeCCcccChhhhhhcCC
Q 025259          154 -------------------------PSAMAMYGVTKTALLGLTKALAAEMA----P-DTRVNCVAPGFVPTHFAQALLGN  203 (255)
Q Consensus       154 -------------------------~~~~~~y~~sKaa~~~l~~~la~e~~----~-~i~v~~v~pg~v~t~~~~~~~~~  203 (255)
                                               ..+...|++||+++.+|++.++.|++    . +|+||+|+||+|+|+|....   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~---  237 (275)
T d1wmaa1         161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK---  237 (275)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT---
T ss_pred             cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc---
Confidence                                     22345799999999999999999874    2 89999999999999986532   


Q ss_pred             HHHHHHhhccCCCCCCCChHHHHHHHHHhc--CCCCCCccccEEeeCCC
Q 025259          204 DAVRKALEGKTLLNRLGTTGNMAAAIAFLA--SDDASYITGETLVVAGG  250 (255)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~va~~~~~l~--s~~~~~~~G~~i~~dgG  250 (255)
                                    ...+|||+|+.++|++  +++....+|+.+. |.+
T Consensus       238 --------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         238 --------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             --------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             --------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                          2447999999999986  4566778999887 443

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=301.76  Aligned_cols=231  Identities=22%  Similarity=0.294  Sum_probs=186.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEE---EeCChhHHH---HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVI---SSRKQKNVD---KAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~---~~r~~~~~~---~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      -|++|||||++|||+++|++|+++|++|+.   +.|+.+..+   +..+++...+.++.++.||++|+++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            367899999999999999999999998554   455544444   44444444577999999999999999999988743


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc--CCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ--KGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~--~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                        |.+|++|||+|... ..++.+.+.++|++++++|+.|++.++|+++|+|+  +.|+||++||..+..+.++...|++|
T Consensus        82 --g~idilvnnag~~~-~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~as  158 (285)
T d1jtva_          82 --GRVDVLVCNAGLGL-LGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCAS  158 (285)
T ss_dssp             --SCCSEEEECCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHH
T ss_pred             --cchhhhhhcccccc-cccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHH
Confidence              78999999999876 78899999999999999999999999999999995  56899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHH---------HHH------hhccCCCCCCCChHHHHH
Q 025259          164 KTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAV---------RKA------LEGKTLLNRLGTTGNMAA  227 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~---------~~~------~~~~~~~~~~~~~~~va~  227 (255)
                      |+|+++|+++++.|+++ |||||+|+||+++|+|.......++.         .++      .....+.++..+|||||+
T Consensus       159 Kaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PeeVA~  238 (285)
T d1jtva_         159 KFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAE  238 (285)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccCCCHHHHHH
Confidence            99999999999999999 99999999999999998765443211         111      112234456889999999


Q ss_pred             HHHHhcCCC---CCCccccEE
Q 025259          228 AIAFLASDD---ASYITGETL  245 (255)
Q Consensus       228 ~~~~l~s~~---~~~~~G~~i  245 (255)
                      .+++++...   .+|++|+.+
T Consensus       239 ~v~~~~~~~~p~~ry~~g~~~  259 (285)
T d1jtva_         239 VFLTALRAPKPTLRYFTTERF  259 (285)
T ss_dssp             HHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHhCCCCCeEEecHHHH
Confidence            999998654   357777643

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=9.6e-43  Score=287.53  Aligned_cols=236  Identities=32%  Similarity=0.426  Sum_probs=200.8

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHc-CCeEEEEEecCCC----HHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKAL-GIEVIGIICHVSN----EQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~~~~~~~D~~~----~~~~~~~~~~~~~~   86 (255)
                      .++|||||++|||+++|++|+++|++|++++|+.+. .+++.+++... +.+...+.+|+.+    ++.++++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999998654 56777777665 5677777766654    67788888889999


Q ss_pred             cCCCcEEEECCCCCCCCCCcC-----------CCCHHHHHHHHHHHhHHHHHHHHHHHhccc-------CCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLL-----------KTKESVLDKLWEINVKSSILLMQDAAPHMQ-------KGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~-----------~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-------~~~~iv~vss~  148 (255)
                      +|++|++|||||+.. +.++.           +...+.+...+..|+.+.+...+...+.+.       ..+.++.+++.
T Consensus        82 ~g~iDilvnnAG~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (266)
T d1mxha_          82 FGRCDVLVNNASAYY-PTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA  160 (266)
T ss_dssp             HSCCCEEEECCCCCC-CCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred             hCCCCEEEECCccCC-CCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhc
Confidence            999999999999864 33322           334555778899999999999998888773       23578889999


Q ss_pred             CccCCCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCC-CCChHHHH
Q 025259          149 AGYQPPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNR-LGTTGNMA  226 (255)
Q Consensus       149 ~~~~~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~va  226 (255)
                      .+..+.+++..|++||+|+++|+++++.|+++ |||||+|+||+++|++..    .++..+......|+++ +.+|||||
T Consensus       161 ~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~----~~~~~~~~~~~~pl~r~~~~peeva  236 (266)
T d1mxha_         161 MTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM----PQETQEEYRRKVPLGQSEASAAQIA  236 (266)
T ss_dssp             GGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS----CHHHHHHHHTTCTTTSCCBCHHHHH
T ss_pred             cccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC----CHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999999999999999999999999 999999999999998653    3556677788888866 48999999


Q ss_pred             HHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          227 AAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++++||+++++.++||++|.+|||+++
T Consensus       237 ~~v~fL~s~~s~~itG~~i~vDGG~~l  263 (266)
T d1mxha_         237 DAIAFLVSKDAGYITGTTLKVDGGLIL  263 (266)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhCchhCCccCCeEEECccHhh
Confidence            999999999999999999999999985

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-43  Score=288.41  Aligned_cols=217  Identities=13%  Similarity=0.136  Sum_probs=191.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC--
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG--   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--   88 (255)
                      +||++|||||++|||++++++|+++|++|+++++++..          .........+|.++.++.+.+.+.+.+.++  
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE----------EASASVIVKMTDSFTEQADQVTAEVGKLLGDQ   70 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT----------TSSEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc----------cccccceeecccCcHHHHHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999999997643          123556778899999999999888887654  


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ++|+||||||......+..+.+.++|++++++|+.+++.+.+++.|+|+++|+||++||..+..+.+++..|++||+|++
T Consensus        71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~  150 (236)
T d1dhra_          71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVH  150 (236)
T ss_dssp             CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHH
T ss_pred             CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHH
Confidence            69999999997654566777788999999999999999999999999998899999999999999999999999999999


Q ss_pred             HHHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEE
Q 025259          169 GLTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETL  245 (255)
Q Consensus       169 ~l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i  245 (255)
                      +|+++++.|++  + |||||+|+||+++|+|.+...+..          +..++.+|+++|+.+.+|+++...++||+.|
T Consensus       151 ~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~~~----------~~~~~~~pe~va~~~~~l~s~~~~~i~G~~i  220 (236)
T d1dhra_         151 QLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPEA----------DFSSWTPLEFLVETFHDWITGNKRPNSGSLI  220 (236)
T ss_dssp             HHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTTS----------CGGGSEEHHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred             HHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCccc----------hhhcCCCHHHHHHHHHHHhCCCccCCCCCeE
Confidence            99999999997  5 999999999999999976543322          3456778999999999999999999999877


Q ss_pred             ee
Q 025259          246 VV  247 (255)
Q Consensus       246 ~~  247 (255)
                      .+
T Consensus       221 ~v  222 (236)
T d1dhra_         221 QV  222 (236)
T ss_dssp             EE
T ss_pred             EE
Confidence            65

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-43  Score=283.72  Aligned_cols=225  Identities=23%  Similarity=0.302  Sum_probs=191.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|++|||||++|||+++|++|+++|++|++++|+++.            .+....++|+++......+.....+.. ..+
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~------------~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~   67 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG------------EDLIYVEGDVTREEDVRRAVARAQEEA-PLF   67 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS------------SSSEEEECCTTCHHHHHHHHHHHHHHS-CEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc------------ccceEeeccccchhhhHHHHHhhhccc-ccc
Confidence            5999999999999999999999999999999998753            356778999999999999988887765 455


Q ss_pred             EEEECCCCCC---CCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc------c--CCCeEEEEcCcCccCCCCCChhh
Q 025259           92 VFVLNAAVNP---YAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM------Q--KGSSVVFISSIAGYQPPSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l------~--~~~~iv~vss~~~~~~~~~~~~y  160 (255)
                      .++++++...   ........+.+.|++++++|+.+.+.+++.+.+.+      .  +.|+||++||..+..+.++...|
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          68 AVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHH
T ss_pred             chhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhh
Confidence            5666665432   23355677889999999999999999999998864      2  35799999999999999999999


Q ss_pred             HHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCC-CCCCCChHHHHHHHHHhcCCCCC
Q 025259          161 GVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTL-LNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      +++|+|+++|+|+++.|+++ |||||+|+||+++|++.....  ....+......| .+|+.+|||||+++.||++  ++
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--~~  223 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP--EKAKASLAAQVPFPPRLGRPEEYAALVLHILE--NP  223 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC--HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--CT
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh--hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--CC
Confidence            99999999999999999999 999999999999999987653  333444444444 4899999999999999997  46


Q ss_pred             CccccEEeeCCCccC
Q 025259          239 YITGETLVVAGGMAS  253 (255)
Q Consensus       239 ~~~G~~i~~dgG~~~  253 (255)
                      ++|||+|.+|||.++
T Consensus       224 ~iTG~~i~VDGG~~m  238 (241)
T d1uaya_         224 MLNGEVVRLDGALRM  238 (241)
T ss_dssp             TCCSCEEEESTTCCC
T ss_pred             CCCCCEEEECCcccC
Confidence            999999999999875

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=6.2e-43  Score=286.13  Aligned_cols=222  Identities=20%  Similarity=0.257  Sum_probs=184.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH---HcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH--H
Q 025259           12 GKVAVVTASTQGIGLGVAERLG---LEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE--K   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~---~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~   86 (255)
                      -|+||||||++|||+++|++|+   ++|++|++++|+++.++++.+ +.+.+.++.+++||++|+++++++++++..  .
T Consensus         2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   80 (248)
T d1snya_           2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKNHSNIHILEIDLRNFDAYDKLVADIEGVTK   80 (248)
T ss_dssp             CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHG
T ss_pred             cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-HHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhh
Confidence            4789999999999999999997   479999999999999888754 444466899999999999999999999854  6


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-------------CCeEEEEcCcCccC-
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-------------GSSVVFISSIAGYQ-  152 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-------------~~~iv~vss~~~~~-  152 (255)
                      ++++|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|++             .+++|+++|..+.. 
T Consensus        81 ~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          81 DQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             cCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            7899999999998765667889999999999999999999999999999852             57899999998764 


Q ss_pred             --CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHH
Q 025259          153 --PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAI  229 (255)
Q Consensus       153 --~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~  229 (255)
                        +.+++.+|++||+|+++|+++++.|+++ |||||+|+||+++|+|.....+                + ++++.++.+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~~----------------~-~~~~~~~~i  223 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAP----------------L-DVPTSTGQI  223 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTCS----------------B-CHHHHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccCC----------------C-CchHHHHHH
Confidence              4566789999999999999999999998 9999999999999999754321                1 233333333


Q ss_pred             HHhcCCCCCCccccEEeeCCCc
Q 025259          230 AFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       230 ~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      +.++.......||++|.+||+.
T Consensus       224 ~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         224 VQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHhcCccCCCcEEEECCeE
Confidence            3333333345689999999864

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-41  Score=280.17  Aligned_cols=213  Identities=23%  Similarity=0.321  Sum_probs=191.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      |+||++|||||++|||+++|++|+++|++|++++|+++.++++.+++... +.....+.+|+++.+.++.+++.+.+.+|
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999999998887654 67899999999999999999999999999


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      .+|+++||||... ..++.+.+.++|++++++|+.+++.++++++|+|+ ++|+||++||..+..+.++...|++||+|+
T Consensus        92 ~~~~li~nag~~~-~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal  170 (269)
T d1xu9a_          92 GLDMLILNHITNT-SLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFAL  170 (269)
T ss_dssp             SCSEEEECCCCCC-CCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHH
T ss_pred             Ccccccccccccc-ccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHH
Confidence            9999999999875 77888999999999999999999999999999996 468999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCC---CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhc
Q 025259          168 LGLTKALAAEMAP---DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLA  233 (255)
Q Consensus       168 ~~l~~~la~e~~~---~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~  233 (255)
                      ++|+++|+.|+++   +|+||+|+||+|+|+|........          +.....+||++|+.++...
T Consensus       171 ~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~~----------~~~~~~~~e~~a~~i~~~~  229 (269)
T d1xu9a_         171 DGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSGI----------VHMQAAPKEECALEIIKGG  229 (269)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCGG----------GGGGCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccCC----------ccccCCCHHHHHHHHHHHh
Confidence            9999999999864   699999999999999876543221          1223557888888777644

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.1e-41  Score=276.54  Aligned_cols=220  Identities=17%  Similarity=0.177  Sum_probs=188.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH--cCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK--YGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~--~g~   89 (255)
                      +++||||||++|||++++++|+++|++|++++|+++..          ........+|..+.+......+.+...  +++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~   71 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQ----------ADSNILVDGNKNWTEQEQSILEQTASSLQGSQ   71 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTT----------SSEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhc----------ccccceeccccCchhHHHHHHHHHHHHhcCCC
Confidence            45689999999999999999999999999999987531          234566778999888888888877774  588


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +|+||||||......+..+.+.++|+.++++|+++++.+.+++.|+|+++++||++||..+..+.+++..|++||+|+++
T Consensus        72 iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~  151 (235)
T d1ooea_          72 VDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHH  151 (235)
T ss_dssp             EEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHH
T ss_pred             eeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHH
Confidence            99999999986544566677778899999999999999999999999988999999999999999999999999999999


Q ss_pred             HHHHHHHHhC--C-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHH-HhcCCCCCCccccEE
Q 025259          170 LTKALAAEMA--P-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIA-FLASDDASYITGETL  245 (255)
Q Consensus       170 l~~~la~e~~--~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~-~l~s~~~~~~~G~~i  245 (255)
                      |+++++.|++  + +|+||+|+||+++|++.+...+..          +..+..+|+++++.++ |+.+.....+||+.+
T Consensus       152 l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~~~----------~~~~~~~~~~va~~~~~~l~~~~~~~~tG~~i  221 (235)
T d1ooea_         152 LTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMPNA----------DHSSWTPLSFISEHLLKWTTETSSRPSSGALL  221 (235)
T ss_dssp             HHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHSTTC----------CGGGCBCHHHHHHHHHHHHHCGGGCCCTTCEE
T ss_pred             HHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCcCC----------ccccCCCHHHHHHHHHHHhcCccccCCCceEE
Confidence            9999999997  4 899999999999999977654322          2345778999999887 555667788999999


Q ss_pred             ee---CCCc
Q 025259          246 VV---AGGM  251 (255)
Q Consensus       246 ~~---dgG~  251 (255)
                      .+   ||+.
T Consensus       222 ~v~~~~g~~  230 (235)
T d1ooea_         222 KITTENGTS  230 (235)
T ss_dssp             EEEEETTEE
T ss_pred             EEEeeCCEE
Confidence            98   5543

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.2e-41  Score=274.09  Aligned_cols=219  Identities=20%  Similarity=0.241  Sum_probs=179.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.|+||||||++|||+++|++|+++|+  .|++++|+.+.++++.+   ..+.+++++.||++++++++++++++.+.++
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~---~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~   78 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS---IKDSRVHVLPLTVTCDKSLDTFVSKVGEIVG   78 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT---CCCTTEEEEECCTTCHHHHHHHHHHHHHHHG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH---hhCCceEEEEEecCCHHHHHHHHHHHHHHhC
Confidence            459999999999999999999999996  58889999988766432   2356899999999999999999999999876


Q ss_pred             C--CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-------------CCeEEEEcCcCccC-
Q 025259           89 R--IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-------------GSSVVFISSIAGYQ-  152 (255)
Q Consensus        89 ~--~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-------------~~~iv~vss~~~~~-  152 (255)
                      .  +|+||||||+.....++.+.+.++|++++++|+.|++.++++++|+|++             .++++++++..... 
T Consensus        79 ~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          79 SDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence            4  9999999998754677889999999999999999999999999999852             25788888776543 


Q ss_pred             ------CCCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHH
Q 025259          153 ------PPSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNM  225 (255)
Q Consensus       153 ------~~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v  225 (255)
                            +..+..+|++||+|+++|+++++.|+++ ||+||+|+||+|+|+|....                 ...+||+.
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~-----------------~~~~~e~~  221 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN-----------------AALTVEQS  221 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC------------------------------HHH
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC-----------------CCCCHHHH
Confidence                  2334567999999999999999999998 99999999999999986421                 23578999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCC
Q 025259          226 AAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      ++.++..+.......+|+.+..||
T Consensus       222 a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         222 TAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHhcCCCCCCeEEECCCC
Confidence            998888887767778999998875

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=1.3e-39  Score=267.38  Aligned_cols=215  Identities=28%  Similarity=0.389  Sum_probs=163.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-GRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~~d   91 (255)
                      |+||||||++|||+++|++|+++|++|++++|++++                 ..+|+.+++..+....++..+. +.+|
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~-----------------~~~d~~~~~~~~~~~~~~~~~~~~~id   64 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE-----------------VIADLSTAEGRKQAIADVLAKCSKGMD   64 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS-----------------EECCTTSHHHHHHHHHHHHTTCTTCCS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH-----------------HHHHhcCHHHHHHHHHHHHHHhCCCCc
Confidence            789999999999999999999999999999998643                 3589999999988877776655 5799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC--CCeEEEEcCcCc-------------------
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK--GSSVVFISSIAG-------------------  150 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~--~~~iv~vss~~~-------------------  150 (255)
                      ++|||||... .       .+.+++...+|..+...+.+...+.+.+  ...+.++.+...                   
T Consensus        65 ~lv~~Ag~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  136 (257)
T d1fjha_          65 GLVLCAGLGP-Q-------TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EEEECCCCCT-T-------CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EEEEcCCCCC-c-------HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcE
Confidence            9999999754 2       1347788999999999999998887642  234544444322                   


Q ss_pred             --------cCC-CCCChhhHHhHHHHHHHHHHHHHHhCC-CcEEEEEeCCcccChhhhhhcCCHHHHHHh-hccCCCCCC
Q 025259          151 --------YQP-PSAMAMYGVTKTALLGLTKALAAEMAP-DTRVNCVAPGFVPTHFAQALLGNDAVRKAL-EGKTLLNRL  219 (255)
Q Consensus       151 --------~~~-~~~~~~y~~sKaa~~~l~~~la~e~~~-~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~  219 (255)
                              ..+ .++..+|++||+|+++|+|+++.|+++ |||||+|+||+++|++......+++..+.. ....|++|+
T Consensus       137 ~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~PlgR~  216 (257)
T d1fjha_         137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPMGRR  216 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCSTTSC
T ss_pred             EEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                    121 123457999999999999999999999 999999999999999988766655544443 344699999


Q ss_pred             CChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          220 GTTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       220 ~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      .+|+|||+++.||+|++++++||++|.+|||++
T Consensus       217 g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         217 AEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             CCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             cCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence            999999999999999999999999999999986

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=100.00  E-value=5.6e-33  Score=228.00  Aligned_cols=221  Identities=17%  Similarity=0.163  Sum_probs=178.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh---hHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ---KNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++|||||++|||++++++|+++|+. |++++|+.   +..++..+++++.+.++.++.||++|+++++++++.+.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            679999999999999999999999994 88999874   4567777888888899999999999999999999988654 


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      +++|.+|||+|... ..++.+.++++|++++++|+.+++.+.+.+.+.  +.++||++||..+..+.++.+.|+++|+++
T Consensus        88 ~~i~~vv~~ag~~~-~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~--~~~~iv~~SS~a~~~g~~~~~~YaAaka~l  164 (259)
T d2fr1a1          88 VPLSAVFHAAATLD-DGTVDTLTGERIERASRAKVLGARNLHELTREL--DLTAFVLFSSFASAFGAPGLGGYAPGNAYL  164 (259)
T ss_dssp             SCEEEEEECCCCCC-CCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTS--CCSEEEEEEEHHHHTCCTTCTTTHHHHHHH
T ss_pred             cccccccccccccc-ccccccccHHHHHHHhhhhccchhHHHHHhhcc--CCceEeeecchhhccCCcccHHHHHHHHhH
Confidence            58999999999876 788999999999999999999999999877664  567999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccCh-hhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTH-FAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      +.|++.++.+   |+++++|+||++.++ |...     ...+.+...  -....+|+++++.+..++....  ....++.
T Consensus       165 ~~la~~~~~~---Gi~v~~I~pg~~~~~g~~~~-----~~~~~~~~~--G~~~~~~~~~~~~l~~~l~~~~--~~~~v~~  232 (259)
T d2fr1a1         165 DGLAQQRRSD---GLPATAVAWGTWAGSGMAEG-----PVADRFRRH--GVIEMPPETACRALQNALDRAE--VCPIVID  232 (259)
T ss_dssp             HHHHHHHHHT---TCCCEEEEECCBC-----------------CTTT--TEECBCHHHHHHHHHHHHHTTC--SSCEECE
T ss_pred             HHHHHHHHhC---CCCEEECCCCcccCCccccc-----hHHHHHHhc--CCCCCCHHHHHHHHHHHHhCCC--ceEEEEe
Confidence            9999988776   999999999988654 3221     111111111  1135689999999988876543  2334455


Q ss_pred             eC
Q 025259          247 VA  248 (255)
Q Consensus       247 ~d  248 (255)
                      +|
T Consensus       233 ~d  234 (259)
T d2fr1a1         233 VR  234 (259)
T ss_dssp             EC
T ss_pred             Cc
Confidence            54

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=4.4e-23  Score=175.98  Aligned_cols=226  Identities=15%  Similarity=0.068  Sum_probs=159.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-----NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|+||||||+|.||++++++|++.|+.|++++|...     .++....+......++.++.+|++|.++++++++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            489999999999999999999999999999999543     233333333334568999999999999999999875   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcc-cCCCeEEEEcCcCccC-----------CC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHM-QKGSSVVFISSIAGYQ-----------PP  154 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l-~~~~~iv~vss~~~~~-----------~~  154 (255)
                        .+|+++|+|+......     +.++.+..+++|+.|+.++++++...- ++..++|++||...+.           +.
T Consensus        78 --~~d~v~h~aa~~~~~~-----~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~  150 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVAV-----SFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF  150 (357)
T ss_dssp             --CCSEEEECCCCCTTTT-----TTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred             --CCCEEEEeecccccch-----hhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCC
Confidence              7999999999864222     224456678999999999999998754 3456899999876431           22


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHH----HHHHhhccC---------CCCCCCC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDA----VRKALEGKT---------LLNRLGT  221 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~----~~~~~~~~~---------~~~~~~~  221 (255)
                      .+...|+.+|.+.+.+++.++..+  ++++..+.|+.+.+|..........    +........         ....+..
T Consensus       151 ~P~~~Y~~sK~~~E~~~~~~~~~~--~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~  228 (357)
T d1db3a_         151 YPRSPYAVAKLYAYWITVNYRESY--GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH  228 (357)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHh--CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence            356789999999999999999887  6888889998887764322111111    111111111         1123677


Q ss_pred             hHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          222 TGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       222 ~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      .+|+++++..++...    .|+.+++.+|...
T Consensus       229 v~D~~~a~~~~~~~~----~~~~yni~sg~~~  256 (357)
T d1db3a_         229 AKDYVKMQWMMLQQE----QPEDFVIATGVQY  256 (357)
T ss_dssp             HHHHHHHHHHTTSSS----SCCCEEECCCCCE
T ss_pred             echHHHHHHHHHhCC----CCCeEEECCCCce
Confidence            899999998887543    4678888877653

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.84  E-value=9.2e-20  Score=154.22  Aligned_cols=229  Identities=14%  Similarity=0.081  Sum_probs=159.8

Q ss_pred             cccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHH
Q 025259            3 KVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         3 ~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      |+++.--.+||+||||||+|.||++++++|+++|+.|+++.|+.+............  ......+.+|+++.+++..++
T Consensus         2 ~~~~~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~   81 (342)
T d1y1pa1           2 KIDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVI   81 (342)
T ss_dssp             CSTTCSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTT
T ss_pred             CCCCCCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhc
Confidence            566666678999999999999999999999999999999999987766655443322  334556789999998877665


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-------
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-------  153 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-------  153 (255)
                      .       ..|.++|+++....     ..+   ....+..|+.++..+++.+...- ...++|++||..+...       
T Consensus        82 ~-------~~~~v~~~a~~~~~-----~~~---~~~~~~~nv~gt~~ll~~~~~~~-~v~~~i~~SS~~~~~~~~~~~~~  145 (342)
T d1y1pa1          82 K-------GAAGVAHIASVVSF-----SNK---YDEVVTPAIGGTLNALRAAAATP-SVKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             T-------TCSEEEECCCCCSC-----CSC---HHHHHHHHHHHHHHHHHHHHTCT-TCCEEEEECCGGGTCCCCTTCCC
T ss_pred             c-------cchhhhhhcccccc-----ccc---ccccccchhhhHHHHHHhhhccc-ccccccccccceeeccCCCCCCC
Confidence            4       68999999996531     122   34557889999999999988742 2358999999754321       


Q ss_pred             ------------------------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCH---HH
Q 025259          154 ------------------------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGND---AV  206 (255)
Q Consensus       154 ------------------------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~---~~  206 (255)
                                              ..+...|+.+|.+.+.+++.+.++...++++..+.|+.+..+.........   .+
T Consensus       146 ~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~  225 (342)
T d1y1pa1         146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGW  225 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHH
T ss_pred             ccccccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHH
Confidence                                    112346999999999999999999877888888999877665432221111   11


Q ss_pred             HHHhhc-c-------CCCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCC
Q 025259          207 RKALEG-K-------TLLNRLGTTGNMAAAIAFLASDDASYITGETLVVAG  249 (255)
Q Consensus       207 ~~~~~~-~-------~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dg  249 (255)
                      ...... .       .....+..++|+|++.+..+...  ...|+.+...+
T Consensus       226 ~~~l~~g~~~~~~~~~~~~~~v~v~Dva~~~i~~l~~~--~~~g~~~~~~~  274 (342)
T d1y1pa1         226 MMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLP--QIERRRVYGTA  274 (342)
T ss_dssp             HHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHCT--TCCSCEEEECC
T ss_pred             HHHHHcCCcCcccCCccceeeeeHHHHHHHHHHhhcCc--cccceEEEEcC
Confidence            111111 1       11122567899999877666432  24565554444

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.82  E-value=1.8e-19  Score=152.11  Aligned_cols=227  Identities=14%  Similarity=0.115  Sum_probs=157.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|.||+++++.|+++|+.|++++|.....+......+. ...++.++++|++|.+.+.++++..     ++|+
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDH-----AIDT   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCCE
Confidence            499999999999999999999999999998743222222222221 2357888999999999998888863     6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC------------CCCChhh
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP------------PSAMAMY  160 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~------------~~~~~~y  160 (255)
                      |||+|+... .    ..+.++..+.+++|+.|+..+++++...-  -.++|++||...+.+            ..+...|
T Consensus        77 ViHlAa~~~-~----~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~--v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y  149 (338)
T d1udca_          77 VIHFAGLKA-V----GESVQKPLEYYDNNVNGTLRLISAMRAAN--VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPY  149 (338)
T ss_dssp             EEECCSCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHH
T ss_pred             EEECCCccc-h----hhHHhCHHHHHHhHHHHHHHHHHHHHHhC--CCEEEecCcceEEccccccccccccccCCCcchH
Confidence            999999643 1    12234456889999999999999998763  348999998876532            2356779


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-------C---HHHHHHhhc-cCC--------------
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-------N---DAVRKALEG-KTL--------------  215 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-------~---~~~~~~~~~-~~~--------------  215 (255)
                      +.+|.+.+.+++....+.. ++++..+.|+.+.++.......       .   +.+...... ..+              
T Consensus       150 ~~sK~~~e~~~~~~~~~~~-~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~  228 (338)
T d1udca_         150 GKSKLMVEQILTDLQKAQP-DWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT  228 (338)
T ss_dssp             HHHHHHHHHHHHHHHHHST-TCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSS
T ss_pred             HHHHhhhhHHHHHHHhhcc-CCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCC
Confidence            9999999999998887743 5777788888776653321110       0   112221211 111              


Q ss_pred             -CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          216 -LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       216 -~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                       .+.+...+|++.+...+.........++++++.++...
T Consensus       229 ~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~  267 (338)
T d1udca_         229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGN  267 (338)
T ss_dssp             CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCE
T ss_pred             ceeeEEEEeehhhhccccccccccccCcceeeecCCCCC
Confidence             11245678888777665544444566889999887654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.82  E-value=1.8e-21  Score=151.75  Aligned_cols=153  Identities=16%  Similarity=0.114  Sum_probs=114.9

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..+|+||+++||||++|||+++++.|+++|++|++++|+.+++++..+++.... ++.+..+|+++.+++++++      
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRF-KVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHH-TCCCEEEECCSHHHHHHHT------
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhcc-chhhhhhhcccHHHHHHHh------
Confidence            458999999999999999999999999999999999999999999988887642 3456789999998887665      


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccCCC-CCChhhHHhH
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQPP-SAMAMYGVTK  164 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~~~-~~~~~y~~sK  164 (255)
                       +++|+||||||..     ....+.++|++.+++|+.+.+.+...+.+.+. .......+++.....+. .+...|+++|
T Consensus        91 -~~iDilin~Ag~g-----~~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk  164 (191)
T d1luaa1          91 -KGAHFVFTAGAIG-----LELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHR  164 (191)
T ss_dssp             -TTCSEEEECCCTT-----CCCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHH
T ss_pred             -cCcCeeeecCccc-----cccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHH
Confidence             4799999999963     24568899999999999887766544433221 11233333332222111 1335699999


Q ss_pred             HHHHHHHH
Q 025259          165 TALLGLTK  172 (255)
Q Consensus       165 aa~~~l~~  172 (255)
                      +++..+++
T Consensus       165 ~a~~~l~~  172 (191)
T d1luaa1         165 ACIAKLFE  172 (191)
T ss_dssp             HHHHHHTS
T ss_pred             HHHHHHHh
Confidence            99987764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.81  E-value=2.8e-18  Score=147.52  Aligned_cols=174  Identities=14%  Similarity=0.096  Sum_probs=132.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh----------------hHHHHHHHHHHH-cCCeEEEEEecCCCHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ----------------KNVDKAVEKLKA-LGIEVIGIICHVSNEQ   74 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~----------------~~~~~~~~~~~~-~~~~~~~~~~D~~~~~   74 (255)
                      |++||||||+|.||.+++++|+++|+.|+++|.-.                ....+....... .+.++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            78999999999999999999999999999987311                111222222222 2567899999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC--
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--  152 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~--  152 (255)
                      .++++++..     ++|+|+|.|+...  .+......+.....+.+|+.|+..+++++...-. ..++++.||...+.  
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~--~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~-~~~~i~~ss~~~~~~~  152 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRS--APYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGE-ECHLVKLGTMGEYGTP  152 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCC--HHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCT-TCEEEEECCGGGGCCC
T ss_pred             HHHHHHHhh-----cchheeccccccc--cccccccccccccccccccccccHHHHHHHHhcc-ccceeecccccccccc
Confidence            999998875     7999999999743  2334455677788899999999999999887532 23577777665432  


Q ss_pred             ----------------------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccCh
Q 025259          153 ----------------------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTH  195 (255)
Q Consensus       153 ----------------------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~  195 (255)
                                            +..+...|+.+|.+.+.+++.+..+.  ++++..+.|+.+..+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~--~l~~~~lR~~~v~G~  215 (393)
T d1i24a_         153 NIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW--GIRATDLNQGVVYGV  215 (393)
T ss_dssp             SSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECS
T ss_pred             ccccccccccccccccccccccccccccHHHHHhhhhccccccccccc--ceeeeecccccccCC
Confidence                                  12344579999999999999998887  788888888877664

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.81  E-value=6.2e-20  Score=156.54  Aligned_cols=223  Identities=12%  Similarity=0.027  Sum_probs=157.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeE-EEEeCChhHHH-HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASV-VISSRKQKNVD-KAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~V-v~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +||||||+|.||++++++|++.|+.| +++++...... .....+ ....++.++.+|++|.+.++.+++..     ++|
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI-SESNRYNFEHADICDSAEITRIFEQY-----QPD   75 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhh-hhcCCcEEEEccCCCHHHHHHHHHhC-----CCC
Confidence            58999999999999999999999985 45554321110 001111 11357899999999999999888764     799


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-------CCCeEEEEcCcCccCC-----------
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-------KGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-------~~~~iv~vss~~~~~~-----------  153 (255)
                      +|||+|+... .    ..+.++..+.+++|+.|+..+.+++.....       +..++|++||...+..           
T Consensus        76 ~VihlAa~~~-~----~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          76 AVMHLAAESH-V----DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEEECCSCCC-H----HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEEECccccc-h----hhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            9999999643 1    112334467899999999999999987542       2348999999875521           


Q ss_pred             ----------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC---C---
Q 025259          154 ----------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL---N---  217 (255)
Q Consensus       154 ----------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---~---  217 (255)
                                ..+...|+.||.+.+.+++.+...+  ++++..+.|+.+.+|......-.+.+..+.....+.   +   
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~--~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~  228 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY--GLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD  228 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence                      2245669999999999999999887  788889999988876532211112333333322222   1   


Q ss_pred             ---CCCChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          218 ---RLGTTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       218 ---~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                         .+...+|+|+++..++....   .|+++++..|..
T Consensus       229 ~~r~~i~v~D~a~ai~~~~~~~~---~~~~~Ni~s~~~  263 (361)
T d1kewa_         229 QIRDWLYVEDHARALHMVVTEGK---AGETYNIGGHNE  263 (361)
T ss_dssp             CEEEEEEHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             eEEeCEEHHHHHHHHHHHHhcCC---CCCeEEECCCCC
Confidence               24678999999998886542   378899987764

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.80  E-value=1e-18  Score=147.55  Aligned_cols=212  Identities=13%  Similarity=0.039  Sum_probs=147.8

Q ss_pred             CEE-EEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-----HHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVA-VVTASTQGIGLGVAERLGLEGASVVISSRKQKN-----VDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~v-lVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |+| |||||+|.||++++++|+++|+.|++++|..+.     ++........ ...++.++.+|++|.+.+.++++..  
T Consensus         1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--   78 (347)
T d1t2aa_           1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV--   78 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc--
Confidence            456 999999999999999999999999999996432     2221111111 1347899999999999999998875  


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc-CCCeEEEEcCcCccC-----------C
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ-KGSSVVFISSIAGYQ-----------P  153 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~~~~iv~vss~~~~~-----------~  153 (255)
                         .+++++|+++... .    ..+.+.....+++|+.|+..+.+++..+.. +..++|++||...+.           +
T Consensus        79 ---~~~~v~~~~a~~~-~----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~  150 (347)
T d1t2aa_          79 ---KPTEIYNLGAQSH-V----KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTP  150 (347)
T ss_dssp             ---CCSEEEECCSCCC-H----HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSC
T ss_pred             ---ccceeeeeeeccc-c----chhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCC
Confidence               7899999998643 1    122344566789999999999999988653 445899999876541           2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC----HHHHHHhhccCC---------CCCCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTL---------LNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~---------~~~~~  220 (255)
                      ..+...|+.||.+.+.+++.+...+  ++.+..+.|+.+..|........    ..+........+         ...+.
T Consensus       151 ~~P~~~Yg~sK~~aE~~~~~~~~~~--~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i  228 (347)
T d1t2aa_         151 FYPRSPYGAAKLYAYWIVVNFREAY--NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG  228 (347)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence            2345679999999999999998877  67888888877766532111111    111222222211         12467


Q ss_pred             ChHHHHHHHHHhcCCC
Q 025259          221 TTGNMAAAIAFLASDD  236 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~  236 (255)
                      ..+|+++++..++...
T Consensus       229 ~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         229 HAKDYVEAMWLMLQND  244 (347)
T ss_dssp             EHHHHHHHHHHHHHSS
T ss_pred             EecHHHHHHHHHhhcC
Confidence            8899999999887653

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=1.9e-18  Score=146.22  Aligned_cols=171  Identities=16%  Similarity=0.130  Sum_probs=128.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH-HHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN-VDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+||||||+|.||++++++|+++|++|+++++.... .+.....-.....++.++.+|++|.+.++.+++..     ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            4799999999999999999999999999998764322 11111111112446788899999999998887753     79


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC---------------CCC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ---------------PPS  155 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~---------------~~~  155 (255)
                      |++||+|+... ..    ...+.....+.+|+.++..+.+++...-  -.++|++||...+.               +..
T Consensus        76 d~VihlAa~~~-~~----~~~~~~~~~~~~N~~~t~~ll~~~~~~~--i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~  148 (347)
T d1z45a2          76 DSVIHFAGLKA-VG----ESTQIPLRYYHNNILGTVVLLELMQQYN--VSKFVFSSSATVYGDATRFPNMIPIPEECPLG  148 (347)
T ss_dssp             CEEEECCSCCC-HH----HHHHSHHHHHHHHHHHHHHHHHHHHHHT--CCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred             CEEEEcccccc-cc----ccccCcccccccchhhhHHHHHHHHhcc--cceEEeecceeeecCcccCCCCCccccccCCC
Confidence            99999999753 11    1223346778899999999999998753  23899999977652               123


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccC
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPT  194 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t  194 (255)
                      +...|+.+|.+.+.+++.+......++++..+.|+.+..
T Consensus       149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g  187 (347)
T d1z45a2         149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIG  187 (347)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEEC
T ss_pred             CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEe
Confidence            456799999999999999988766577777777765554

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=1.5e-18  Score=145.07  Aligned_cols=222  Identities=15%  Similarity=0.039  Sum_probs=152.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHH-HHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD-KAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |+||||||+|.||++++++|+++|+.|+.++|..+... ...+++. ...++.++.+|++|.+++.+.+...     ..+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~   74 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG-IEGDIQYEDGDMADACSVQRAVIKA-----QPQ   74 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT-CGGGEEEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhc-ccCCcEEEEccccChHHhhhhhccc-----ccc
Confidence            78999999999999999999999999999998754321 1111111 1346899999999999999888875     688


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----------CCCCCChhh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------QPPSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----------~~~~~~~~y  160 (255)
                      +++|+++... .. ..   .+...+.+..|+.++..+++++...-. ..++++.||..-+           .+..+...|
T Consensus        75 ~~~~~a~~~~-~~-~~---~~~~~~~~~~n~~g~~~~l~~~~~~~~-~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~Y  148 (321)
T d1rpna_          75 EVYNLAAQSF-VG-AS---WNQPVTTGVVDGLGVTHLLEAIRQFSP-ETRFYQASTSEMFGLIQAERQDENTPFYPRSPY  148 (321)
T ss_dssp             EEEECCSCCC-HH-HH---TTSHHHHHHHHTHHHHHHHHHHHHHCT-TSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred             cccccccccc-cc-cc---ccchHHHHhhhhhchHHHHHHHHHhCC-CcccccccchhhcCcccCCCCCCCCCccccChh
Confidence            8999888643 11 11   123467789999999999999887532 2356666654432           122356789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC----HHHHHHhhccCCC---------CCCCChHHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTLL---------NRLGTTGNMAA  227 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~~---------~~~~~~~~va~  227 (255)
                      +.+|.+.+.+++.+..++  ++++..+.|+.+..|........    ..+........+.         ..+...+|+++
T Consensus       149 ~~sK~~~E~~~~~~~~~~--~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~  226 (321)
T d1rpna_         149 GVAKLYGHWITVNYRESF--GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVE  226 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhc--CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHH
Confidence            999999999999999887  67888888887776643221111    1111212212111         13577899999


Q ss_pred             HHHHhcCCCCCCccccEEeeCCCcc
Q 025259          228 AIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       228 ~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ++..++....    +..+++.+|..
T Consensus       227 ~~~~~~~~~~----~~~~ni~~~~~  247 (321)
T d1rpna_         227 AMWLMLQQDK----ADDYVVATGVT  247 (321)
T ss_dssp             HHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHhcCC----cCCceeccccc
Confidence            9999885532    35567776643

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=7.1e-18  Score=141.82  Aligned_cols=212  Identities=13%  Similarity=0.032  Sum_probs=147.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-----HHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-----NVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |++|||||+|.||++++++|+++|+.|++++|..+     ..+........ ....+.++.+|+++.+++...++..   
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~---   78 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---   78 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh---
Confidence            78999999999999999999999999999998532     22222111111 1346889999999999999888864   


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhccc---CCCeEEEEcCcCcc----------CC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQ---KGSSVVFISSIAGY----------QP  153 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~---~~~~iv~vss~~~~----------~~  153 (255)
                        ++|++||+|+....     ..+.+.....+..|+.++..+..++.....   ...++++.||....          .+
T Consensus        79 --~~D~Vih~Aa~~~~-----~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~  151 (339)
T d1n7ha_          79 --KPDEVYNLAAQSHV-----AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTP  151 (339)
T ss_dssp             --CCSEEEECCSCCCH-----HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSC
T ss_pred             --ccchhhhccccccc-----cccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCC
Confidence              79999999997531     112344567889999999999998876432   22356666655432          12


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHH----HHHhhccCC---------CCCCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAV----RKALEGKTL---------LNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~----~~~~~~~~~---------~~~~~  220 (255)
                      ..+...|+.+|.+.+.+++.+...+  ++++..+.|+.+.+|...........    ........+         ...+.
T Consensus       152 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~  229 (339)
T d1n7ha_         152 FHPRSPYAASKCAAHWYTVNYREAY--GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWG  229 (339)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECE
T ss_pred             CCCcchhhHHHHHHHHHHHHHHHHh--CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccce
Confidence            3456789999999999999999887  78999999988887643221111111    111111111         11256


Q ss_pred             ChHHHHHHHHHhcCCC
Q 025259          221 TTGNMAAAIAFLASDD  236 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~  236 (255)
                      ..+|+++++..++...
T Consensus       230 ~v~D~a~~~~~~~~~~  245 (339)
T d1n7ha_         230 FAGDYVEAMWLMLQQE  245 (339)
T ss_dssp             EHHHHHHHHHHHHTSS
T ss_pred             eeehHHHHHHHHHhcC
Confidence            7899999999888654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.77  E-value=8.1e-18  Score=141.91  Aligned_cols=226  Identities=15%  Similarity=-0.011  Sum_probs=158.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh----HHHHHHHHH-HHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK----NVDKAVEKL-KALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~----~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .+-|++|||||+|.||++++++|.+.|+.|++++|...    ..+...... .....++.++.+|+.|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            45789999999999999999999999999999987332    222221111 1112468899999999887665433   


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------C
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------P  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~  153 (255)
                          ..+.++|.++....     ..+.++....+++|+.|+..+++++...-  ..++|++||...+.           +
T Consensus        91 ----~~~~v~~~~a~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~~~  159 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSV-----PRSINDPITSNATNIDGFLNMLIAARDAK--VQSFTYAASSSTYGDHPGLPKVEDTI  159 (341)
T ss_dssp             ----TCSEEEECCSCCCH-----HHHHHCHHHHHHHHTHHHHHHHHHHHHTT--CSEEEEEEEGGGGTTCCCSSBCTTCC
T ss_pred             ----cccccccccccccc-----cccccCccchhheeehhHHHHHHHHHhcC--CceEEEcccceeeCCCCCCCccCCCC
Confidence                68999998886431     12456677889999999999999998763  34899999987653           2


Q ss_pred             CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC----HHHHHHhhccCC---------CCCCC
Q 025259          154 PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN----DAVRKALEGKTL---------LNRLG  220 (255)
Q Consensus       154 ~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~----~~~~~~~~~~~~---------~~~~~  220 (255)
                      ..+...|+.+|.+.+.+++.+.+..  ++++..+.|+.+.++........    ...........+         ...+.
T Consensus       160 ~~p~~~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i  237 (341)
T d1sb8a_         160 GKPLSPYAVTKYVNELYADVFSRCY--GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFC  237 (341)
T ss_dssp             CCCCSHHHHHHHHHHHHHHHHHHHH--CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCE
T ss_pred             CCCCCcchHHHHHHHHHHHHHHHHh--CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEE
Confidence            2355789999999999999999877  68888888887776543221111    112222221111         12366


Q ss_pred             ChHHHHHHHHHhcCCCCCCccccEEeeCCCcc
Q 025259          221 TTGNMAAAIAFLASDDASYITGETLVVAGGMA  252 (255)
Q Consensus       221 ~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~  252 (255)
                      ..+|++.++..++.... ...|+.+++.++..
T Consensus       238 ~v~D~~~a~~~~~~~~~-~~~~~~~~~~~~~~  268 (341)
T d1sb8a_         238 YIENTVQANLLAATAGL-DARNQVYNIAVGGR  268 (341)
T ss_dssp             EHHHHHHHHHHHHTCCG-GGCSEEEEESCSCC
T ss_pred             EEeccchhhhhhhhccc-cccceeeeeccccc
Confidence            77999999888775443 35678888876654

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.76  E-value=1e-17  Score=140.46  Aligned_cols=220  Identities=15%  Similarity=0.070  Sum_probs=144.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh-HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQK-NVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|.||++++++|+++|++|+++++-.. ........+.. ..++.++.+|+++.+++.++++..     ++|+
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~-~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~   75 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS-LGNFEFVHGDIRNKNDVTRLITKY-----MPDS   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT-TCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhc-cCCcEEEEcccCCHHHHHHHHHhc-----CCce
Confidence            6899999999999999999999999999875322 22222233332 357888999999999999988865     6999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-------------------
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-------------------  153 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-------------------  153 (255)
                      +||+|+... .    ....++....+++|+.|+.++++++...-  ..+.++.||..+..+                   
T Consensus        76 Vih~aa~~~-~----~~~~~~~~~~~~~Nv~gt~nll~~~~~~~--~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~  148 (338)
T d1orra_          76 CFHLAGQVA-M----TTSIDNPCMDFEINVGGTLNLLEAVRQYN--SNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDK  148 (338)
T ss_dssp             EEECCCCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTC
T ss_pred             EEeeccccc-c----cccccChHHHHHHHHHHHHHHHHhhhccc--cccccccccccccccccccccccccccccccccc
Confidence            999999754 1    11223457889999999999999888753  235555555443321                   


Q ss_pred             ---------CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeC-----CcccChhhhhhcCCHHHHHHhh----c-cC
Q 025259          154 ---------PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAP-----GFVPTHFAQALLGNDAVRKALE----G-KT  214 (255)
Q Consensus       154 ---------~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~p-----g~v~t~~~~~~~~~~~~~~~~~----~-~~  214 (255)
                               ..+...|+.+|...+.+.......+..  ....+.|     +..........  ...+.....    . ..
T Consensus       149 ~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  224 (338)
T d1orra_         149 PNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL--NTVVFRHSSMYGGRQFATYDQGW--VGWFCQKAVEIKNGINK  224 (338)
T ss_dssp             TTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCC--EEEEEEECCEECTTCCCBTTBCH--HHHHHHHHHHHHTTCCC
T ss_pred             ccCcccCCccccccccccccchhhhhhhhhhhccCc--ccccccccceeeccccccccccc--cchhhHHHHHHHhccCC
Confidence                     134678999999999999999988843  3333333     22222111111  011111111    0 00


Q ss_pred             ---------CCCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          215 ---------LLNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       215 ---------~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                               ....+...+|++++++.++... ...+|+++++.+|.
T Consensus       225 ~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~-~~~~~~~~~i~~~~  269 (338)
T d1orra_         225 PFTISGNGKQVRDVLHAEDMISLYFTALANV-SKIRGNAFNIGGTI  269 (338)
T ss_dssp             CEEEESSSCCEEECEEHHHHHHHHHHHHHTH-HHHTTCEEEESSCG
T ss_pred             ceEEeCCCceeEeeecccchhhHHHHHHhcc-ccccCccccccccc
Confidence                     1123556799999998877442 34678888887654

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.3e-17  Score=140.84  Aligned_cols=230  Identities=13%  Similarity=0.066  Sum_probs=155.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC------hhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRK------QKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~------~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .|+||||||+|.||++++++|++.|+.|+++++.      ........+.++. ...++.++.+|++|.+.+++++..  
T Consensus         2 ~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~--   79 (346)
T d1ek6a_           2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKK--   79 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHH--
T ss_pred             CCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeeccccccccccccc--
Confidence            4799999999999999999999999999998742      1111111222222 245788999999999999887775  


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------  153 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------  153 (255)
                         ..+++++|+|+... .    ..+.++..+.+++|+.++..+.+++...-.  .+++++||...+..           
T Consensus        80 ---~~~~~i~h~Aa~~~-~----~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v--~~~i~~ss~~~~~~~~~~~~~~~~~  149 (346)
T d1ek6a_          80 ---YSFMAVIHFAGLKA-V----GESVQKPLDYYRVNLTGTIQLLEIMKAHGV--KNLVFSSSATVYGNPQYLPLDEAHP  149 (346)
T ss_dssp             ---CCEEEEEECCSCCC-H----HHHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred             ---cccccccccccccC-c----HhhHhCHHHHHHhhhcccccccchhhhcCc--ccccccccceeeecccccccccccc
Confidence               36889999999753 1    122334567799999999999999886532  37999988765422           


Q ss_pred             -CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhc-------CC---HHHHHHhhc-cCC------
Q 025259          154 -PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALL-------GN---DAVRKALEG-KTL------  215 (255)
Q Consensus       154 -~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~-------~~---~~~~~~~~~-~~~------  215 (255)
                       ..+...|+.+|...+..++.++.... +.....+.|+.+.++......       ..   +........ ..+      
T Consensus       150 ~~~~~~~Y~~~k~~~e~~~~~~~~~~~-~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~  228 (346)
T d1ek6a_         150 TGGCTNPYGKSKFFIEEMIRDLCQADK-TWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGN  228 (346)
T ss_dssp             CCCCSSHHHHHHHHHHHHHHHHHHHCT-TCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECS
T ss_pred             ccccCChHHHHHHHHHHHHHHHHHhcc-CCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCC
Confidence             23456799999999999998876422 566777777665544211100       00   111111111 111      


Q ss_pred             ---------CCCCCChHHHHHHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          216 ---------LNRLGTTGNMAAAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       216 ---------~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                               .+.+...+|+|.++..+.........++++++.+|...+
T Consensus       229 ~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s  276 (346)
T d1ek6a_         229 DYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYS  276 (346)
T ss_dssp             CSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEE
T ss_pred             cccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCccc
Confidence                     123678899999888776555555678899999887643

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.76  E-value=9.5e-18  Score=142.60  Aligned_cols=218  Identities=15%  Similarity=0.045  Sum_probs=155.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++.+||||||+|.||++++++|+++|+.|+++++......      ...-....+..+|+.+.+.+..+++       ++
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~------~~~~~~~~~~~~D~~~~~~~~~~~~-------~~   80 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM------TEDMFCDEFHLVDLRVMENCLKVTE-------GV   80 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS------CGGGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch------hhhcccCcEEEeechhHHHHHHHhh-------cC
Confidence            5778999999999999999999999999999987643210      0111234567789999888766554       79


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------------  153 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------------  153 (255)
                      |.+||+|+... ..   ....+.....+.+|+.++..+++++...-.  .++|++||...+..                 
T Consensus        81 d~Vih~a~~~~-~~---~~~~~~~~~~~~~n~~gt~~ll~~~~~~~v--k~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~  154 (363)
T d2c5aa1          81 DHVFNLAADMG-GM---GFIQSNHSVIMYNNTMISFNMIEAARINGI--KRFFYASSACIYPEFKQLETTNVSLKESDAW  154 (363)
T ss_dssp             SEEEECCCCCC-CH---HHHTTCHHHHHHHHHHHHHHHHHHHHHTTC--SEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred             CeEeecccccc-cc---cccccccccccccccchhhHHHHhHHhhCc--cccccccccccccccccccccccccccccCC
Confidence            99999998754 21   111233566789999999999999987643  48999999876531                 


Q ss_pred             -CCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC-----HHHHHHhhccC---------CCCC
Q 025259          154 -PSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN-----DAVRKALEGKT---------LLNR  218 (255)
Q Consensus       154 -~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~-----~~~~~~~~~~~---------~~~~  218 (255)
                       ..+...|+.+|.+.+.+++.+..++  ++++..+.|+.+.++........     ...........         ..+.
T Consensus       155 ~~~p~~~Yg~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd  232 (363)
T d2c5aa1         155 PAEPQDAFGLEKLATEELCKHYNKDF--GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS  232 (363)
T ss_dssp             SBCCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEEC
T ss_pred             cCCCCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEE
Confidence             2345679999999999999999887  78999999988877643211111     11111111111         1234


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +...+|+++++..++...    .|+.+++.+|...
T Consensus       233 ~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         233 FTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             CEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             EeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            677899999999887543    4678899888654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.75  E-value=1.3e-17  Score=140.55  Aligned_cols=216  Identities=13%  Similarity=0.048  Sum_probs=152.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      +||||||+|.||++++++|+++|+ .|+++++..+...+..     ...++.++.+|+++.+++.+.+.+      .+|+
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~-----~~~~~~~i~~Di~~~~~~~~~~~~------~~d~   70 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL-----NHPHFHFVEGDISIHSEWIEYHVK------KCDV   70 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT-----TCTTEEEEECCTTTCSHHHHHHHH------HCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhc-----cCCCeEEEECccCChHHHHHHHHh------CCCc
Confidence            589999999999999999999994 7998888765433221     145799999999987776553322      5999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC------------------
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP------------------  154 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~------------------  154 (255)
                      +||+|+.....     ...++..+.+.+|+.++..+++++...   +.+.+++||...+...                  
T Consensus        71 Vih~a~~~~~~-----~~~~~~~~~~~~nv~gt~~ll~~~~~~---~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~  142 (342)
T d2blla1          71 VLPLVAIATPI-----EYTRNPLRVFELDFEENLRIIRYCVKY---RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVN  142 (342)
T ss_dssp             EEECBCCCCHH-----HHHHSHHHHHHHHTHHHHHHHHHHHHT---TCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTT
T ss_pred             ccccccccccc-----ccccCCccccccccccccccccccccc---cccccccccccccccccccccccccccccccccC
Confidence            99999975411     122334578999999999999998764   2366777776654221                  


Q ss_pred             CCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcC-----C---HHHHHHhhccC---------CCC
Q 025259          155 SAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLG-----N---DAVRKALEGKT---------LLN  217 (255)
Q Consensus       155 ~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~-----~---~~~~~~~~~~~---------~~~  217 (255)
                      .+...|+.||.+.+.+++.+.+.+  ++++..+.|..+..+.......     .   ..+..+.....         ...
T Consensus       143 ~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r  220 (342)
T d2blla1         143 KPRWIYSVSKQLLDRVIWAYGEKE--GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKR  220 (342)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEE
T ss_pred             CCcchhhhcccchhhhhhhhhccc--CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeee
Confidence            234679999999999999999887  7788888887776653222211     1   12222222111         122


Q ss_pred             CCCChHHHHHHHHHhcCCCCCCccccEEeeCCC
Q 025259          218 RLGTTGNMAAAIAFLASDDASYITGETLVVAGG  250 (255)
Q Consensus       218 ~~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG  250 (255)
                      .+...+|+++++..++........|+++++.+|
T Consensus       221 ~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~  253 (342)
T d2blla1         221 CFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (342)
T ss_dssp             ECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             eecccccccceeeeehhhccccCCCeEEEEecc
Confidence            377889999999999876555566999999654

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.74  E-value=4.9e-18  Score=143.61  Aligned_cols=220  Identities=15%  Similarity=0.064  Sum_probs=146.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+||||||+|.||++++++|+++|+.|.+++++..........++. .+.++.++.+|++|.+.+..++.       ..
T Consensus         2 ~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~   74 (346)
T d1oc2a_           2 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KA   74 (346)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hh
Confidence            57899999999999999999999998755444321000000011111 24578999999999999888765       68


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------------
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------------  152 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------------  152 (255)
                      |.++|.|+.....     ....+..+.+++|+.++..+++++...-   .++|++||...+.                  
T Consensus        75 ~~v~~~a~~~~~~-----~~~~~~~~~~~~N~~g~~nll~~~~~~~---~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~  146 (346)
T d1oc2a_          75 DAIVHYAAESHND-----NSLNDPSPFIHTNFIGTYTLLEAARKYD---IRFHHVSTDEVYGDLPLREDLPGHGEGPGEK  146 (346)
T ss_dssp             SEEEECCSCCCHH-----HHHHCCHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGGGGCCBCCGGGSTTTTCSTTSS
T ss_pred             hhhhhhhhccccc-----chhhCcccceeeehHhHHhhhhhhcccc---ccccccccceEecccCccccccccccCcccc
Confidence            8899999875411     1123345778999999999999887653   3778887776442                  


Q ss_pred             -----CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHH-hhccC--------CCCC
Q 025259          153 -----PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKA-LEGKT--------LLNR  218 (255)
Q Consensus       153 -----~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~-~~~~~--------~~~~  218 (255)
                           +..+...|+.+|.+.+.+++.+..++  ++++..+.|+.+.+|.............. ..+..        ....
T Consensus       147 ~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~--~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~  224 (346)
T d1oc2a_         147 FTAETNYNPSSPYSSTKAASDLIVKAWVRSF--GVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD  224 (346)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHHHHHHc--CCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCcccc
Confidence                 12244679999999999999998887  89999999998887642111111111111 12111        1123


Q ss_pred             CCChHHHHHHHHHhcCCCCCCccccEEeeCCCc
Q 025259          219 LGTTGNMAAAIAFLASDDASYITGETLVVAGGM  251 (255)
Q Consensus       219 ~~~~~~va~~~~~l~s~~~~~~~G~~i~~dgG~  251 (255)
                      +...+|++++++.+....   ..|..+.+.+|-
T Consensus       225 ~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~~  254 (346)
T d1oc2a_         225 WIHTNDHSTGVWAILTKG---RMGETYLIGADG  254 (346)
T ss_dssp             CEEHHHHHHHHHHHHHHC---CTTCEEEECCSC
T ss_pred             ccchhhHHHHHHHHHhhc---ccCccccccccc
Confidence            677789999988876543   224555555543

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=7.4e-18  Score=140.64  Aligned_cols=214  Identities=13%  Similarity=0.038  Sum_probs=145.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+||||||+|.||++++++|+++|++|+++++......+...... ...++.....|+.+.     +       +.++|+
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~-----~-------~~~~d~   68 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI-GHENFELINHDVVEP-----L-------YIEVDQ   68 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT-TCTTEEEEECCTTSC-----C-------CCCCSE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhc-CCCceEEEehHHHHH-----H-------HcCCCE
Confidence            789999999999999999999999999999874321111111111 123455555555322     1       236999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC----------------CCCC
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ----------------PPSA  156 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~----------------~~~~  156 (255)
                      |||+|+... .. ..   .++..+.+++|+.++..+++++...-   .++|++||...+.                +..+
T Consensus        69 VihlAa~~~-~~-~~---~~~~~~~~~~Nv~g~~~ll~~~~~~~---~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p  140 (312)
T d2b69a1          69 IYHLASPAS-PP-NY---MYNPIKTLKTNTIGTLNMLGLAKRVG---ARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGP  140 (312)
T ss_dssp             EEECCSCCS-HH-HH---TTCHHHHHHHHHHHHHHHHHHHHHHT---CEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSST
T ss_pred             EEECcccCC-ch-hH---HhCHHHHHHHHHHHHHHHHHHHHHcC---CcEEEEEChheecCCCCCCCCccccCCCCCCCC
Confidence            999999653 11 11   12345678999999999999987642   3799999976552                1235


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC--HHHHHHhhccCC---------CCCCCChHHH
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN--DAVRKALEGKTL---------LNRLGTTGNM  225 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~--~~~~~~~~~~~~---------~~~~~~~~~v  225 (255)
                      ...|+.+|.+.+.+++.++.++  ++++..+.|+.+.+|........  +.+..+.....+         ...+...+|+
T Consensus       141 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~  218 (312)
T d2b69a1         141 RACYDEGKRVAETMCYAYMKQE--GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDL  218 (312)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHHHh--CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHH
Confidence            6789999999999999999887  78999999999988654322111  222222222211         1235667999


Q ss_pred             HHHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          226 AAAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       226 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      ++++..++...    .+..+++.+|.+.
T Consensus       219 ~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         219 VNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             HHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             HHHHHHHHhhc----cCCceEecCCccc
Confidence            99999888543    3567888877654

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.74  E-value=6.4e-18  Score=141.48  Aligned_cols=220  Identities=15%  Similarity=0.061  Sum_probs=154.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEE------eCChhHHHH-HHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVIS------SRKQKNVDK-AVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~------~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      +||||||+|.||++++++|+++|+.|..+      ++....... ....+ ....++.++.+|.++.........     
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~-----   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPV-DADPRLRFVHGDIRDAGLLARELR-----   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGG-TTCTTEEEEECCTTCHHHHHHHTT-----
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhh-hcCCCeEEEEeccccchhhhcccc-----
Confidence            58999999999999999999999865433      322111000 00111 124578999999999887665433     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CC
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PS  155 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~  155 (255)
                        .+|.++|+|+...     .....+...+.+++|+.++..+++++...-  ..++|++||...+.+           ..
T Consensus        76 --~~d~vi~~a~~~~-----~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~--~~~~I~~Ss~~~yg~~~~~~~~E~~~~~  146 (322)
T d1r6da_          76 --GVDAIVHFAAESH-----VDRSIAGASVFTETNVQGTQTLLQCAVDAG--VGRVVHVSTNQVYGSIDSGSWTESSPLE  146 (322)
T ss_dssp             --TCCEEEECCSCCC-----HHHHHHCCHHHHHHHTHHHHHHHHHHHHTT--CCEEEEEEEGGGGCCCSSSCBCTTSCCC
T ss_pred             --ccceEEeeccccc-----ccccccchHHHhhhhHHHHHHHHHHHHHcC--CceEEEeecceeecCCCCCCCCCCCCCC
Confidence              7999999998743     112334456778999999999999998753  348999999876533           23


Q ss_pred             CChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC---------CCCCChHHHH
Q 025259          156 AMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL---------NRLGTTGNMA  226 (255)
Q Consensus       156 ~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~va  226 (255)
                      +...|+.+|.+.+.+++.++++.  ++++..+.|+.+.++........+.+..+.....+.         ..+...+|+|
T Consensus       147 p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a  224 (322)
T d1r6da_         147 PNSPYAASKAGSDLVARAYHRTY--GLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHC  224 (322)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH--CCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHh--CCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHH
Confidence            55689999999999999999887  789999999988876432111112333333333222         1246779999


Q ss_pred             HHHHHhcCCCCCCccccEEeeCCCccC
Q 025259          227 AAIAFLASDDASYITGETLVVAGGMAS  253 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  253 (255)
                      +++..++....   .|+++++.+|...
T Consensus       225 ~ai~~~~~~~~---~~~~~ni~~~~~~  248 (322)
T d1r6da_         225 RGIALVLAGGR---AGEIYHIGGGLEL  248 (322)
T ss_dssp             HHHHHHHHHCC---TTCEEEECCCCEE
T ss_pred             HHHHHHHhCCC---CCCeeEEeecccc
Confidence            99999986543   4789999887654

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=3.6e-16  Score=122.52  Aligned_cols=197  Identities=11%  Similarity=0.049  Sum_probs=131.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ..|+|+||||+|.||++++++|+++|+.|.++.|++++++..      ....+.++.+|++|.+++.++++       ..
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~------~~~~~~~~~gD~~d~~~l~~al~-------~~   68 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE------GPRPAHVVVGDVLQAADVDKTVA-------GQ   68 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS------SCCCSEEEESCTTSHHHHHHHHT-------TC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc------cccccccccccccchhhHHHHhc-------CC
Confidence            468899999999999999999999999999999998764321      12457789999999999887766       68


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCC----ChhhHHhHHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSA----MAMYGVTKTA  166 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~----~~~y~~sKaa  166 (255)
                      |++||++|... .  ....         +++..++..+++++...  .-.++|++||.......+.    ...|...|..
T Consensus        69 d~vi~~~g~~~-~--~~~~---------~~~~~~~~~l~~aa~~~--~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~  134 (205)
T d1hdoa_          69 DAVIVLLGTRN-D--LSPT---------TVMSEGARNIVAAMKAH--GVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIR  134 (205)
T ss_dssp             SEEEECCCCTT-C--CSCC---------CHHHHHHHHHHHHHHHH--TCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHH
T ss_pred             CEEEEEeccCC-c--hhhh---------hhhHHHHHHHHHHHHhc--CCCeEEEEeeeeccCCCccccccccccchHHHH
Confidence            99999999643 1  1111         23344555666666543  2348999998766543322    2345555555


Q ss_pred             HHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccccEEe
Q 025259          167 LLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITGETLV  246 (255)
Q Consensus       167 ~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G~~i~  246 (255)
                      .+.+.+   .   .+++...|.||++..........      ..........+.+.+|+|++++..+....  ..|+.+.
T Consensus       135 ~e~~l~---~---~~~~~tiirp~~~~~~~~~~~~~------~~~~~~~~~~~i~~~DvA~~~~~~l~~~~--~~g~~~~  200 (205)
T d1hdoa_         135 MHKVLR---E---SGLKYVAVMPPHIGDQPLTGAYT------VTLDGRGPSRVISKHDLGHFMLRCLTTDE--YDGHSTY  200 (205)
T ss_dssp             HHHHHH---H---TCSEEEEECCSEEECCCCCSCCE------EESSSCSSCSEEEHHHHHHHHHHTTSCST--TTTCEEE
T ss_pred             HHHHHH---h---cCCceEEEecceecCCCCcccEE------EeeCCCCCCCcCCHHHHHHHHHHHhCCCC--CCCEEEe
Confidence            554432   1   28999999999775332111100      00011122346788999999999986543  4588776


Q ss_pred             eC
Q 025259          247 VA  248 (255)
Q Consensus       247 ~d  248 (255)
                      +-
T Consensus       201 ~s  202 (205)
T d1hdoa_         201 PS  202 (205)
T ss_dssp             EE
T ss_pred             cC
Confidence            54

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.71  E-value=4.4e-16  Score=133.19  Aligned_cols=172  Identities=20%  Similarity=0.141  Sum_probs=128.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHH-cCCeEEEEeC---------ChhHHHHHHHHHHHc--------CCeEEEEEecCCCHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGL-EGASVVISSR---------KQKNVDKAVEKLKAL--------GIEVIGIICHVSNEQ   74 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~r---------~~~~~~~~~~~~~~~--------~~~~~~~~~D~~~~~   74 (255)
                      -+||||||+|.||++++++|++ .|++|+++|+         ..+..+.....++..        .....++.+|++|.+
T Consensus         3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~   82 (383)
T d1gy8a_           3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNED   82 (383)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHH
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCHH
Confidence            4699999999999999999986 6899999874         122333333333321        235788999999999


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC--
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ--  152 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~--  152 (255)
                      .++++++.    ..++|+++|+|+... ..    ...+.....+++|+.++..+++++...-.  .++++.++...+.  
T Consensus        83 ~l~~~~~~----~~~~d~ViH~Aa~~~-~~----~~~~~~~~~~~~N~~~t~~~l~~~~~~~~--~~~~~~~s~~~~~~~  151 (383)
T d1gy8a_          83 FLNGVFTR----HGPIDAVVHMCAFLA-VG----ESVRDPLKYYDNNVVGILRLLQAMLLHKC--DKIIFSSSAAIFGNP  151 (383)
T ss_dssp             HHHHHHHH----SCCCCEEEECCCCCC-HH----HHHHCHHHHHHHHHHHHHHHHHHHHHTTC--CEEEEEEEGGGTBSC
T ss_pred             Hhhhhhhc----cceeehhhccccccc-cc----ccccccccccccccccccccchhhhccCC--ccccccccccccccc
Confidence            98887764    357899999999754 11    12344567789999999999999987543  3677766655432  


Q ss_pred             ----------------CCCCChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhh
Q 025259          153 ----------------PPSAMAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFA  197 (255)
Q Consensus       153 ----------------~~~~~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~  197 (255)
                                      +..+...|+.+|.+.+.+++.+...+  ++++.++.|+.+..+..
T Consensus       152 ~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         152 TMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY--GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             CC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEECCCT
T ss_pred             ccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh--CCCEEEEecceeeccCc
Confidence                            12346779999999999999998877  78888888887776543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=1.6e-16  Score=132.26  Aligned_cols=151  Identities=13%  Similarity=0.162  Sum_probs=120.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+||||||+|.||++++++|+++|+.|+++++..                    .+|+++.+.+..+++.-     .+|.
T Consensus         3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~--------------------~~~~~~~~~~~~~~~~~-----~~d~   57 (315)
T d1e6ua_           3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD--------------------ELNLLDSRAVHDFFASE-----RIDQ   57 (315)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT--------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch--------------------hccccCHHHHHHHHhhc-----CCCE
Confidence            5899999999999999999999999988766543                    16899999988877642     7999


Q ss_pred             EEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC----------------CC
Q 025259           93 FVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP----------------SA  156 (255)
Q Consensus        93 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~----------------~~  156 (255)
                      ++|+|+... .   ......+..+.+++|+.++..+++++...-  -.++|++||...+.+.                ++
T Consensus        58 v~~~a~~~~-~---~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~--v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~  131 (315)
T d1e6ua_          58 VYLAAAKVG-G---IVANNTYPADFIYQNMMIESNIIHAAHQND--VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT  131 (315)
T ss_dssp             EEECCCCCC-C---HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT--CCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGG
T ss_pred             EEEcchhcc-c---cccchhhHHHHHHHHHHHHHHHHHHHHHcC--CCEEEEECCceEcCCCCCCCccCCccccCCCCCC
Confidence            999997643 1   111234456678999999999999998763  3489999998876422                12


Q ss_pred             ChhhHHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          157 MAMYGVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       157 ~~~y~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                      ...|+.+|.+.+.+++.+.++.  ++++..+.|+.+.+|.
T Consensus       132 ~~~Y~~sK~~~E~~~~~~~~~~--gl~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         132 NEPYAIAKIAGIKLCESYNRQY--GRDYRSVMPTNLYGPH  169 (315)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHH--CCEEEEEEECEEESTT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHh--CCCEEEEeeccEECCC
Confidence            3469999999999999999887  7899999999888764

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=2.4e-16  Score=133.22  Aligned_cols=213  Identities=19%  Similarity=0.093  Sum_probs=148.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++||+||||||+|.||+++++.|+++|+.|++++|+.+......+... ....+.++.+|++|++++..+++..     .
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~-~~~~i~~~~~Dl~d~~~l~~~~~~~-----~   79 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR-VADGMQSEIGDIRDQNKLLESIREF-----Q   79 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT-TTTTSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh-cccCCeEEEeeccChHhhhhhhhhc-----h
Confidence            689999999999999999999999999999999998765444333221 2345888999999999998888765     7


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC------------CCCCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ------------PPSAM  157 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~------------~~~~~  157 (255)
                      +|+++|+|+...     ...+.+..+..+.+|+.++..+++++...- ....+++.|+.....            +..+.
T Consensus        80 ~~~v~~~aa~~~-----~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~  153 (356)
T d1rkxa_          80 PEIVFHMAAQPL-----VRLSYSEPVETYSTNVMGTVYLLEAIRHVG-GVKAVVNITSDKCYDNKEWIWGYRENEAMGGY  153 (356)
T ss_dssp             CSEEEECCSCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHC-CCCEEEEECCGGGBCCCCSSSCBCTTSCBCCS
T ss_pred             hhhhhhhhcccc-----ccccccCCccccccccccchhhhhhhhccc-cccccccccccccccccccccccccccccCCC
Confidence            999999999643     112245567789999999999999998753 223455555444331            12346


Q ss_pred             hhhHHhHHHHHHHHHHHHHHhC------C-CcEEEEEeCCcccChhhhhhcC-CHHHHHHhhccCCC--------CCCCC
Q 025259          158 AMYGVTKTALLGLTKALAAEMA------P-DTRVNCVAPGFVPTHFAQALLG-NDAVRKALEGKTLL--------NRLGT  221 (255)
Q Consensus       158 ~~y~~sKaa~~~l~~~la~e~~------~-~i~v~~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~~~--------~~~~~  221 (255)
                      ..|+.+|...+.+++.++.++.      . ++.+..+.|+.+..+....... .+.+........+.        ..+..
T Consensus       154 ~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (356)
T d1rkxa_         154 DPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQH  233 (356)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred             CccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccc
Confidence            6799999999999999888763      2 5788888888777653211100 01222233322221        22445


Q ss_pred             hHHHHHHHHHhcC
Q 025259          222 TGNMAAAIAFLAS  234 (255)
Q Consensus       222 ~~~va~~~~~l~s  234 (255)
                      .+|++.++..++.
T Consensus       234 v~D~~~a~~~~~~  246 (356)
T d1rkxa_         234 VLEPLSGYLLLAQ  246 (356)
T ss_dssp             THHHHHHHHHHHH
T ss_pred             cccccchhhhhhh
Confidence            6889988776654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=8.5e-17  Score=128.58  Aligned_cols=200  Identities=11%  Similarity=0.038  Sum_probs=135.8

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..-++++|+||||||+|.||++++++|++.|.  .|+++.|++.....      .....+....+|+.+.+++...    
T Consensus         8 ~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~------~~~~~i~~~~~D~~~~~~~~~~----   77 (232)
T d2bkaa1           8 EDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE------EAYKNVNQEVVDFEKLDDYASA----   77 (232)
T ss_dssp             HHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS------GGGGGCEEEECCGGGGGGGGGG----
T ss_pred             HHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc------cccceeeeeeeccccccccccc----
Confidence            33346789999999999999999999999995  69999997644221      1123566677888876554433    


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHh
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVT  163 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~s  163 (255)
                         +...|+++|++|...        ......+..++|+.++..+.+.+...-  -.++|++|+..+....  ...|+.+
T Consensus        78 ---~~~~d~vi~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~a~~~~--v~~fi~~Ss~~~~~~~--~~~Y~~~  142 (232)
T d2bkaa1          78 ---FQGHDVGFCCLGTTR--------GKAGAEGFVRVDRDYVLKSAELAKAGG--CKHFNLLSSKGADKSS--NFLYLQV  142 (232)
T ss_dssp             ---GSSCSEEEECCCCCH--------HHHHHHHHHHHHTHHHHHHHHHHHHTT--CCEEEEECCTTCCTTC--SSHHHHH
T ss_pred             ---ccccccccccccccc--------cccchhhhhhhcccccceeeecccccC--ccccccCCccccccCc--cchhHHH
Confidence               347999999998642        234466778899999999999887643  3489999998765443  4569999


Q ss_pred             HHHHHHHHHHHHHHhCCCc-EEEEEeCCcccChhhhhhcCCHHHHHHhhccCCC----CCCCChHHHHHHHHHhcCCCC
Q 025259          164 KTALLGLTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLL----NRLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       164 Kaa~~~l~~~la~e~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~va~~~~~l~s~~~  237 (255)
                      |...+...+.    +  +. ++..+.||.+..+...... ...+........+.    ......+|+|++++..+....
T Consensus       143 K~~~E~~l~~----~--~~~~~~IlRP~~i~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~  214 (232)
T d2bkaa1         143 KGEVEAKVEE----L--KFDRYSVFRPGVLLCDRQESRP-GEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR  214 (232)
T ss_dssp             HHHHHHHHHT----T--CCSEEEEEECCEEECTTGGGSH-HHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred             HHHhhhcccc----c--cccceEEecCceeecCCCcCcH-HHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence            9888866532    2  33 5778899999876443211 11122222222211    234566999999887765443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.61  E-value=1.4e-15  Score=120.88  Aligned_cols=216  Identities=11%  Similarity=0.005  Sum_probs=137.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCe--EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGAS--VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++||||||+|.||++++++|+++|+.  |+...|+++..+       ....++.++.+|+++.+.+.++++       .+
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~-------~~~~~~~~~~~d~~~~~~~~~~~~-------~~   69 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKE-------KIGGEADVFIGDITDADSINPAFQ-------GI   69 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHH-------HTTCCTTEEECCTTSHHHHHHHHT-------TC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHH-------hccCCcEEEEeeeccccccccccc-------cc
Confidence            79999999999999999999999976  555677775433       223466788999999999887765       69


Q ss_pred             cEEEECCCCCCCCCC--------cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHH
Q 025259           91 DVFVLNAAVNPYAAD--------LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGV  162 (255)
Q Consensus        91 d~lv~~ag~~~~~~~--------~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~  162 (255)
                      |.+||+++.......        ........+.....+|+.++..+........  .+...+.++.....+..+...+..
T Consensus        70 d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~  147 (252)
T d2q46a1          70 DALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG--VKHIVVVGSMGGTNPDHPLNKLGN  147 (252)
T ss_dssp             SEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT--CSEEEEEEETTTTCTTCGGGGGGG
T ss_pred             eeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeecccccccc--ccccccccccccCCCCcccccccc
Confidence            999999986431111        1111122345567889999988888776653  346777777666555443333333


Q ss_pred             hH-HHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCcc
Q 025259          163 TK-TALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKTLLNRLGTTGNMAAAIAFLASDDASYIT  241 (255)
Q Consensus       163 sK-aa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~  241 (255)
                      ++ .....+...+..+.  ++++..+.|+++..+..............  .......+...+|+|++++.++..+.  ..
T Consensus       148 ~~~~~~~~~~~~~~~~~--~~~~~ilRp~~v~g~~~~~~~~~~~~~~~--~~~~~~~~i~~~Dva~a~~~~l~~~~--~~  221 (252)
T d2q46a1         148 GNILVWKRKAEQYLADS--GTPYTIIRAGGLLDKEGGVRELLVGKDDE--LLQTDTKTVPRADVAEVCIQALLFEE--AK  221 (252)
T ss_dssp             CCHHHHHHHHHHHHHHS--SSCEEEEEECEEECSCTTSSCEEEESTTG--GGGSSCCEEEHHHHHHHHHHHTTCGG--GT
T ss_pred             cchhhhhhhhhhhhhcc--cccceeecceEEECCCcchhhhhhccCcc--cccCCCCeEEHHHHHHHHHHHhCCcc--cc
Confidence            22 22233333333332  78999999998876642211000000000  00112346678999999999886543  56


Q ss_pred             ccEEeeCCC
Q 025259          242 GETLVVAGG  250 (255)
Q Consensus       242 G~~i~~dgG  250 (255)
                      |+++++.++
T Consensus       222 g~~~~i~~~  230 (252)
T d2q46a1         222 NKAFDLGSK  230 (252)
T ss_dssp             TEEEEEEEC
T ss_pred             CcEEEEeeC
Confidence            889988653

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.43  E-value=6.7e-13  Score=107.83  Aligned_cols=191  Identities=14%  Similarity=0.136  Sum_probs=130.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|.||++++++|.++|++|+.++|++                     +|++|.++++++++..     ++|++
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~---------------------~D~~d~~~~~~~l~~~-----~~d~v   56 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------------LDITNVLAVNKFFNEK-----KPNVV   56 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh---------------------ccCCCHHHHHHHHHHc-----CCCEE
Confidence            489999999999999999999999999999854                     5899999999888765     79999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc-----------CCCCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY-----------QPPSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~-----------~~~~~~~~y~~  162 (255)
                      ||+|+...     .+......+..+..|+.....+........   ..+++.||...+           .+..+...|+.
T Consensus        57 ih~a~~~~-----~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~~~  128 (281)
T d1vl0a_          57 INCAAHTA-----VDKCEEQYDLAYKINAIGPKNLAAAAYSVG---AEIVQISTDYVFDGEAKEPITEFDEVNPQSAYGK  128 (281)
T ss_dssp             EECCCCCC-----HHHHHHCHHHHHHHHTHHHHHHHHHHHHHT---CEEEEEEEGGGSCSCCSSCBCTTSCCCCCSHHHH
T ss_pred             Eeeccccc-----cccccccchhhccccccccccccccccccc---ccccccccceeeeccccccccccccccchhhhhh
Confidence            99998643     111233346677888888888877766542   356666665432           12345677999


Q ss_pred             hHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHHHHhhccC-------CCCCCCChHHHHHHHHHhcCC
Q 025259          163 TKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-------LLNRLGTTGNMAAAIAFLASD  235 (255)
Q Consensus       163 sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~va~~~~~l~s~  235 (255)
                      +|...+.+++    +.  +.+...+.|+++..+-...   ...+........       -...+...+|+++++.+++..
T Consensus       129 ~k~~~e~~~~----~~--~~~~~i~R~~~vyG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~  199 (281)
T d1vl0a_         129 TKLEGENFVK----AL--NPKYYIVRTAWLYGDGNNF---VKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDE  199 (281)
T ss_dssp             HHHHHHHHHH----HH--CSSEEEEEECSEESSSSCH---HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHH
T ss_pred             hhhHHHHHHH----Hh--CCCccccceeEEeCCCccc---ccchhhhhccCCceeecCCceeccchhhhhhhhhhhhhhh
Confidence            9988777664    22  4567778998887653211   112222222221       113467889999999999855


Q ss_pred             CCCCccccEEeeCCCc
Q 025259          236 DASYITGETLVVAGGM  251 (255)
Q Consensus       236 ~~~~~~G~~i~~dgG~  251 (255)
                      ..   +| .+++-+|.
T Consensus       200 ~~---~g-~~~~~~~~  211 (281)
T d1vl0a_         200 KN---YG-TFHCTCKG  211 (281)
T ss_dssp             TC---CE-EEECCCBS
T ss_pred             cc---cC-ceeEeCCC
Confidence            42   34 55555543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.41  E-value=3.5e-13  Score=110.86  Aligned_cols=207  Identities=11%  Similarity=0.010  Sum_probs=120.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHH--HHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNV--DKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++||||||+|.||++++++|++.|++|+++.|+....  .+...........+.++.+|+++.+.+.+.++       ..
T Consensus         4 ~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~~   76 (312)
T d1qyda_           4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------QV   76 (312)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------TC
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------Cc
Confidence            3499999999999999999999999999999975432  11111111123457788999999988877665       68


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----CCCChhhHHhHH
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----PSAMAMYGVTKT  165 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----~~~~~~y~~sKa  165 (255)
                      +.++++++... .               ..|..+...++.++....  ..++++.||......     ..+...|..+|.
T Consensus        77 ~~~~~~~~~~~-~---------------~~~~~~~~~~l~~a~~~~--~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~  138 (312)
T d1qyda_          77 DVVISALAGGV-L---------------SHHILEQLKLVEAIKEAG--NIKRFLPSEFGMDPDIMEHALQPGSITFIDKR  138 (312)
T ss_dssp             SEEEECCCCSS-S---------------STTTTTHHHHHHHHHHSC--CCSEEECSCCSSCTTSCCCCCSSTTHHHHHHH
T ss_pred             chhhhhhhhcc-c---------------ccchhhhhHHHHHHHHhc--CCcEEEEeeccccCCCcccccchhhhhhHHHH
Confidence            88999887542 1               123334445555555432  346677776543321     222333444444


Q ss_pred             HHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHHH----H---HhhccCCCCCCCChHHHHHHHHHhcCCCCC
Q 025259          166 ALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAVR----K---ALEGKTLLNRLGTTGNMAAAIAFLASDDAS  238 (255)
Q Consensus       166 a~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~va~~~~~l~s~~~~  238 (255)
                      ..+    .+..+.  ++++..+.|+.+..+............    .   ..........+...+|+|++++.++... .
T Consensus       139 ~~~----~~~~~~--~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~-~  211 (312)
T d1qyda_         139 KVR----RAIEAA--SIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDP-Q  211 (312)
T ss_dssp             HHH----HHHHHT--TCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCG-G
T ss_pred             HHH----Hhhccc--ccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCc-c
Confidence            433    333333  677788888877654332211000000    0   0000011223677899999999988553 3


Q ss_pred             CccccEEeeCCCc
Q 025259          239 YITGETLVVAGGM  251 (255)
Q Consensus       239 ~~~G~~i~~dgG~  251 (255)
                      ..++.++.+.++.
T Consensus       212 ~~~~~~~~~~~~~  224 (312)
T d1qyda_         212 TLNKTMYIRPPMN  224 (312)
T ss_dssp             GSSSEEECCCGGG
T ss_pred             ccCceEEEeCCCc
Confidence            3344445555544

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.36  E-value=2.3e-12  Score=105.12  Aligned_cols=209  Identities=9%  Similarity=0.009  Sum_probs=122.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH--HHHHHHH-cCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK--AVEKLKA-LGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      -|+||||||+|.||++++++|++.|+.|++++|+......  ....+.. ....+.++.+|+.+.......++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            3689999999999999999999999999999997544211  1112222 13456778999999998777765       


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      ..+.++++++...                    ..+...+.++....  ...++++.||........+...+...+....
T Consensus        76 ~~~~vi~~~~~~~--------------------~~~~~~~~~a~~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~  133 (307)
T d1qyca_          76 NVDVVISTVGSLQ--------------------IESQVNIIKAIKEV--GTVKRFFPSEFGNDVDNVHAVEPAKSVFEVK  133 (307)
T ss_dssp             TCSEEEECCCGGG--------------------SGGGHHHHHHHHHH--CCCSEEECSCCSSCTTSCCCCTTHHHHHHHH
T ss_pred             hceeeeecccccc--------------------cchhhHHHHHHHHh--ccccceeeecccccccccccccccccccccc
Confidence            6889999887532                    11223334444433  2235677666544333333333444444333


Q ss_pred             HHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCCHHH------HHHhhccCCCCCCCChHHHHHHHHHhcCCCCCCccc
Q 025259          169 GLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGNDAV------RKALEGKTLLNRLGTTGNMAAAIAFLASDDASYITG  242 (255)
Q Consensus       169 ~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~va~~~~~l~s~~~~~~~G  242 (255)
                      ........+.  +++...+.|+.+..+...........      ............+...+|+|++++.++... ...++
T Consensus       134 ~~~~~~~~~~--~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~-~~~~~  210 (307)
T d1qyca_         134 AKVRRAIEAE--GIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDP-RTLNK  210 (307)
T ss_dssp             HHHHHHHHHH--TCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCG-GGTTE
T ss_pred             ccccchhhcc--CCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcCh-hhcCc
Confidence            3333333333  67788889988876543221110000      000001112234678899999999988653 22334


Q ss_pred             cEEeeCCCcc
Q 025259          243 ETLVVAGGMA  252 (255)
Q Consensus       243 ~~i~~dgG~~  252 (255)
                      ..+++.+|..
T Consensus       211 ~~~~~~~~~~  220 (307)
T d1qyca_         211 TLYLRLPANT  220 (307)
T ss_dssp             EEECCCGGGE
T ss_pred             eeEEeCCCCc
Confidence            4444444443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.36  E-value=1.2e-13  Score=108.15  Aligned_cols=185  Identities=14%  Similarity=0.074  Sum_probs=118.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|+||||||+|.||++++++|++.|+  .|+...|++..          ...+   +..+..|..++.   +   ...+.
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~----------~~~~---~~~~~~d~~~~~---~---~~~~~   62 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA----------EHPR---LDNPVGPLAELL---P---QLDGS   62 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC----------CCTT---EECCBSCHHHHG---G---GCCSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh----------hccc---ccccccchhhhh---h---ccccc
Confidence            58999999999999999999999997  46666665421          1112   334455543322   1   12346


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALLG  169 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~~  169 (255)
                      +|.+|+++|.....       ....+...++|+.++..+++++...  ...+++++||..+...  ....|..+|...+.
T Consensus        63 ~d~vi~~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~a~~~--~v~~~i~~Ss~~~~~~--~~~~y~~~K~~~E~  131 (212)
T d2a35a1          63 IDTAFCCLGTTIKE-------AGSEEAFRAVDFDLPLAVGKRALEM--GARHYLVVSALGADAK--SSIFYNRVKGELEQ  131 (212)
T ss_dssp             CSEEEECCCCCHHH-------HSSHHHHHHHHTHHHHHHHHHHHHT--TCCEEEEECCTTCCTT--CSSHHHHHHHHHHH
T ss_pred             hheeeeeeeeeccc-------cccccccccchhhhhhhcccccccc--cccccccccccccccc--cccchhHHHHHHhh
Confidence            89999999864211       1123567889999999999988764  3348999998766543  35679999988776


Q ss_pred             HHHHHHHHhCCCc-EEEEEeCCcccChhhhhhcCCHHHHHHhhccC-C--CC--CCCChHHHHHHHHHhcCCCC
Q 025259          170 LTKALAAEMAPDT-RVNCVAPGFVPTHFAQALLGNDAVRKALEGKT-L--LN--RLGTTGNMAAAIAFLASDDA  237 (255)
Q Consensus       170 l~~~la~e~~~~i-~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~-~--~~--~~~~~~~va~~~~~l~s~~~  237 (255)
                      +.+    +.  +. ++..+.|+.+..+.......     ....... +  .+  .....+|+|+++..++..+.
T Consensus       132 ~l~----~~--~~~~~~I~Rp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~  194 (212)
T d2a35a1         132 ALQ----EQ--GWPQLTIARPSLLFGPREEFRLA-----EILAAPIARILPGKYHGIEACDLARALWRLALEEG  194 (212)
T ss_dssp             HHT----TS--CCSEEEEEECCSEESTTSCEEGG-----GGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             hcc----cc--ccccceeeCCcceeCCcccccHH-----HHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence            553    21  33 57788999887654221100     0000000 0  00  12456899999999886654

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.32  E-value=3e-12  Score=104.52  Aligned_cols=129  Identities=22%  Similarity=0.178  Sum_probs=95.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +||||||+|.||++++++|.+.|..| .+++....                 +.+|++|.+.++++++..     ++|+|
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~-----------------~~~Dl~~~~~~~~~i~~~-----~~D~V   58 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE-----------------FCGDFSNPKGVAETVRKL-----RPDVI   58 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS-----------------SCCCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc-----------------ccCcCCCHHHHHHHHHHc-----CCCEE
Confidence            49999999999999999999988644 44554321                 347999999999988865     79999


Q ss_pred             EECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC-----------CCCCChhhHH
Q 025259           94 VLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ-----------PPSAMAMYGV  162 (255)
Q Consensus        94 v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~-----------~~~~~~~y~~  162 (255)
                      ||+||... ....    .+.-...+++|+.++..+.+++...   ..+++++||...+.           +..+...|+.
T Consensus        59 ih~Aa~~~-~~~~----~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~  130 (298)
T d1n2sa_          59 VNAAAHTA-VDKA----ESEPELAQLLNATSVEAIAKAANET---GAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGK  130 (298)
T ss_dssp             EECCCCCC-HHHH----TTCHHHHHHHHTHHHHHHHHHHTTT---TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHH
T ss_pred             EEeccccc-cccc----ccCccccccccccccccchhhhhcc---ccccccccccccccCCCCCCCccccccCCCchHhh
Confidence            99999753 1111    1223567899999999999988754   34788888776542           2234568999


Q ss_pred             hHHHHHHHHHH
Q 025259          163 TKTALLGLTKA  173 (255)
Q Consensus       163 sKaa~~~l~~~  173 (255)
                      +|.+.+.+.+.
T Consensus       131 ~k~~~e~~~~~  141 (298)
T d1n2sa_         131 TKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHH
T ss_pred             hhhhhhhhHHh
Confidence            99888766543

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.23  E-value=3.5e-11  Score=100.91  Aligned_cols=205  Identities=14%  Similarity=0.064  Sum_probs=122.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH-HHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH-RKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-~~~~~~~~~~~~g~   89 (255)
                      +-|+|+||||+|.||++++++|+++|++|+++.|+..+...  ..+.. ...+.++.+|+.|+.+ ++.++       ..
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~--~~~~~-~~~v~~~~gD~~d~~~~~~~a~-------~~   71 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA-IPNVTLFQGPLLNNVPLMDTLF-------EG   71 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT-STTEEEEESCCTTCHHHHHHHH-------TT
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhh--hhhcc-cCCCEEEEeeCCCcHHHHHHHh-------cC
Confidence            46899999999999999999999999999999998765432  22222 2457889999998654 33332       36


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC--CCCChhhHHhHHHH
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP--PSAMAMYGVTKTAL  167 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~--~~~~~~y~~sKaa~  167 (255)
                      .|.++++..... .                .++.....+++++...  ...++++.||......  ......|..+|...
T Consensus        72 ~~~~~~~~~~~~-~----------------~~~~~~~~~~~aa~~a--gv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~  132 (350)
T d1xgka_          72 AHLAFINTTSQA-G----------------DEIAIGKDLADAAKRA--GTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTV  132 (350)
T ss_dssp             CSEEEECCCSTT-S----------------CHHHHHHHHHHHHHHH--SCCSEEEEEECCCGGGTSSCCCCTTTHHHHHH
T ss_pred             CceEEeeccccc-c----------------hhhhhhhHHHHHHHHh--CCCceEEEeeccccccCCcccchhhhhhHHHH
Confidence            888777765321 1                1222334455555443  2236777777655432  23345566777666


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChhhhhhcCC---HHHHHHh-hccCCCC-----CCCC-hHHHHHHHHHhcCCCC
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHFAQALLGN---DAVRKAL-EGKTLLN-----RLGT-TGNMAAAIAFLASDDA  237 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~~~~---~~~~~~~-~~~~~~~-----~~~~-~~~va~~~~~l~s~~~  237 (255)
                      +.+.+    +  .+++...+.|+++...+.......   ....... .-..+..     .+.. .+|+++++..++.+..
T Consensus       133 ~~~~~----~--~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~  206 (350)
T d1xgka_         133 ENYVR----Q--LGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGP  206 (350)
T ss_dssp             HHHHH----T--SSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCH
T ss_pred             HHHHH----h--hccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCCh
Confidence            55433    2  256777888886654432111110   0000000 0000110     1123 4789999998886554


Q ss_pred             CCccccEEeeCCC
Q 025259          238 SYITGETLVVAGG  250 (255)
Q Consensus       238 ~~~~G~~i~~dgG  250 (255)
                      ...+|+.+.+.|.
T Consensus       207 ~~~~G~~~~~~g~  219 (350)
T d1xgka_         207 QKWNGHRIALTFE  219 (350)
T ss_dssp             HHHTTCEEEECSE
T ss_pred             hhcCCeEEEEeCC
Confidence            5568899988764

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=3.8e-11  Score=98.12  Aligned_cols=213  Identities=14%  Similarity=0.164  Sum_probs=127.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH--HcCCCc
Q 025259           15 AVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE--KYGRID   91 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~--~~g~~d   91 (255)
                      ||||||+|.||++++++|+++|. .|+++++-....+. . .+.+.      ..+|..+.+..   .+....  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~-~-~~~~~------~~~~~~~~~~~---~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-V-NLVDL------NIADYMDKEDF---LIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG-H-HHHTS------CCSEEEEHHHH---HHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchh-h-ccccc------chhhhccchHH---HHHHhhhhcccchh
Confidence            89999999999999999999996 58887643322111 1 11111      12333333332   233322  234678


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC-----------CCCChhh
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP-----------PSAMAMY  160 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~-----------~~~~~~y  160 (255)
                      +++|.|+.....    ..   ..+...+.|+.++..+.++....-.   ++++.||.....+           ..+...|
T Consensus        71 ~i~~~aa~~~~~----~~---~~~~~~~~~~~~~~~~l~~~~~~~i---~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y  140 (307)
T d1eq2a_          71 AIFHEGACSSTT----EW---DGKYMMDNNYQYSKELLHYCLEREI---PFLYASSAATYGGRTSDFIESREYEKPLNVY  140 (307)
T ss_dssp             EEEECCSCCCTT----CC---CHHHHHHHTHHHHHHHHHHHHHHTC---CEEEEEEGGGGTTCCSCBCSSGGGCCCSSHH
T ss_pred             hhhhhccccccc----cc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc
Confidence            899998854311    11   2344578888888888888776532   3566555554422           2456789


Q ss_pred             HHhHHHHHHHHHHHHHHhCCCcEEEEEeCCcccChhhhhh--cCC--HHHHHHhhcc----------CCCCCCCChHHHH
Q 025259          161 GVTKTALLGLTKALAAEMAPDTRVNCVAPGFVPTHFAQAL--LGN--DAVRKALEGK----------TLLNRLGTTGNMA  226 (255)
Q Consensus       161 ~~sKaa~~~l~~~la~e~~~~i~v~~v~pg~v~t~~~~~~--~~~--~~~~~~~~~~----------~~~~~~~~~~~va  226 (255)
                      +.+|.+.+.+++.+..+.  ++++..+.|..+..+.....  ...  ..+.......          .....+...+|++
T Consensus       141 ~~~K~~~e~~~~~~~~~~--~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~  218 (307)
T d1eq2a_         141 GYSKFLFDEYVRQILPEA--NSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA  218 (307)
T ss_dssp             HHHHHHHHHHHHHHGGGC--SSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHH
T ss_pred             ccccchhhhhcccccccc--ccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHH
Confidence            999999999999888776  56777777776665432111  111  1112222111          1123456678999


Q ss_pred             HHHHHhcCCCCCCccccEEeeCCCccCC
Q 025259          227 AAIAFLASDDASYITGETLVVAGGMASR  254 (255)
Q Consensus       227 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  254 (255)
                      +++..++....    ...+++.+|...+
T Consensus       219 ~~~~~~~~~~~----~~~~~~~~~~~~s  242 (307)
T d1eq2a_         219 DVNLWFLENGV----SGIFNLGTGRAES  242 (307)
T ss_dssp             HHHHHHHHHCC----CEEEEESCSCCBC
T ss_pred             HHHHHHhhhcc----ccccccccccchh
Confidence            99988775432    3567777776543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.98  E-value=8.3e-15  Score=113.27  Aligned_cols=46  Identities=22%  Similarity=0.432  Sum_probs=42.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL   59 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~   59 (255)
                      ++.|+||+|++|+++|+.|++.|++|++.+|++++++++.+++.+.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~   47 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI   47 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence            4778899999999999999999999999999999999999988764

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=98.40  E-value=1.4e-06  Score=66.05  Aligned_cols=110  Identities=15%  Similarity=0.131  Sum_probs=75.5

Q ss_pred             CCEEEE-eCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-HcCC
Q 025259           12 GKVAVV-TASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE-KYGR   89 (255)
Q Consensus        12 ~k~vlV-tG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~g~   89 (255)
                      |++++| +||+|++|.+.+......|++|+.+.|+.+..++..+.+++.|.+..+..-+... .+....+.++.+ ..++
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad~vi~~~~~~~-~~~~~~v~~~~~~~g~~  107 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNS-REFGPTIKEWIKQSGGE  107 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHC-GGGHHHHHHHHHHHTCC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhccccEEEeccccch-hHHHHHHHHHHhhccCC
Confidence            555555 7999999999988888889999999999888888888888888665443321112 223333444433 3457


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      +|+++.+.|..            .+               +..+..++++|++|.++...
T Consensus       108 vdvv~D~vg~~------------~~---------------~~~~~~l~~~G~~v~~G~~~  140 (189)
T d1gu7a2         108 AKLALNCVGGK------------SS---------------TGIARKLNNNGLMLTYGGMS  140 (189)
T ss_dssp             EEEEEESSCHH------------HH---------------HHHHHTSCTTCEEEECCCCS
T ss_pred             ceEEEECCCcc------------hh---------------hhhhhhhcCCcEEEEECCcc
Confidence            99999998731            11               23345678899999887654

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.28  E-value=6e-06  Score=61.98  Aligned_cols=85  Identities=15%  Similarity=0.285  Sum_probs=65.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++++|+++|.|+ ||.|++++..|++.|.. ++++.|+.+..++.....+..  .........|+.+.+++.....   
T Consensus        14 ~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---   89 (182)
T d1vi2a1          14 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA---   89 (182)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH---
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc---
Confidence            4789999999999 69999999999999985 889999988777665544332  1234456788999887765544   


Q ss_pred             HHcCCCcEEEECCCCC
Q 025259           85 EKYGRIDVFVLNAAVN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                          ..|++||+....
T Consensus        90 ----~~diiIN~Tp~G  101 (182)
T d1vi2a1          90 ----SADILTNGTKVG  101 (182)
T ss_dssp             ----TCSEEEECSSTT
T ss_pred             ----ccceeccccCCc
Confidence                699999998754

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=98.28  E-value=1.2e-06  Score=65.58  Aligned_cols=106  Identities=19%  Similarity=0.173  Sum_probs=72.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH-cC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK-YG   88 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~-~g   88 (255)
                      .+|+++||+||+||+|...++.....|++|+.+.+++++.+.+    ++.|.+..+   |-.+.  ..   +.+... -+
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~----~~lGa~~vi---~~~~~--~~---~~~~~~~~~   97 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL----RVLGAKEVL---AREDV--MA---ERIRPLDKQ   97 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH----HHTTCSEEE---ECC--------------CCSC
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH----Hhcccceee---ecchh--HH---HHHHHhhcc
Confidence            3588999999999999999988888999999999998876544    344655443   22221  11   112221 24


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPP  154 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~  154 (255)
                      ++|+++.+.|...                           .+..+..++++|+++.++...+..+.
T Consensus        98 gvD~vid~vgg~~---------------------------~~~~l~~l~~~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2          98 RWAAAVDPVGGRT---------------------------LATVLSRMRYGGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             CEEEEEECSTTTT---------------------------HHHHHHTEEEEEEEEECSCCSSSCCC
T ss_pred             CcCEEEEcCCchh---------------------------HHHHHHHhCCCceEEEeecccCcccC
Confidence            7999999998532                           23445677889999999987666543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=98.21  E-value=8e-06  Score=60.39  Aligned_cols=105  Identities=16%  Similarity=0.209  Sum_probs=72.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-R   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~   89 (255)
                      .|.+++|+| +|++|...+..+...|++|+++++++++++...    +.+.+..+. .|-. .+......+++.+..| .
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~----~~ga~~~~~-~~~~-~~~~~~~~~~~~~~~g~g   98 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK----NCGADVTLV-VDPA-KEEESSIIERIRSAIGDL   98 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HTTCSEEEE-CCTT-TSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHH----HcCCcEEEe-cccc-ccccchhhhhhhcccccC
Confidence            488999997 689999999888889999999999998865443    345444332 2222 2233444556666554 6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|++|.++|..           +               ..+..+..++++|+++.++-.
T Consensus        99 ~D~vid~~g~~-----------~---------------~~~~a~~~~~~~G~iv~~G~~  131 (170)
T d1e3ja2          99 PNVTIDCSGNE-----------K---------------CITIGINITRTGGTLMLVGMG  131 (170)
T ss_dssp             CSEEEECSCCH-----------H---------------HHHHHHHHSCTTCEEEECSCC
T ss_pred             CceeeecCCCh-----------H---------------HHHHHHHHHhcCCceEEEecC
Confidence            89999999841           1               234445667889999998743

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=98.16  E-value=4.7e-06  Score=62.52  Aligned_cols=105  Identities=17%  Similarity=0.259  Sum_probs=74.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +|+++||+||+|++|.+.+......|++|+.+.+++++.+.    +++.+.+..+.   ..+++..+...+..  ...++
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~----~~~~Ga~~vi~---~~~~~~~~~~~~~~--~~~Gv   99 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAY----LKQIGFDAAFN---YKTVNSLEEALKKA--SPDGY   99 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHH----HHHTTCSEEEE---TTSCSCHHHHHHHH--CTTCE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHH----HHhhhhhhhcc---cccccHHHHHHHHh--hcCCC
Confidence            48999999999999999999999999999999998876433    34456554433   33333333332222  12369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY  151 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~  151 (255)
                      |+++.+.|. .                          ..+...+.++++|+++.++.....
T Consensus       100 d~v~D~vG~-~--------------------------~~~~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         100 DCYFDNVGG-E--------------------------FLNTVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             EEEEESSCH-H--------------------------HHHHHGGGEEEEEEEEECCCGGGT
T ss_pred             ceeEEecCc-h--------------------------hhhhhhhhccCCCeEEeecceeec
Confidence            999999983 1                          235567788888999998766544

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=4.6e-06  Score=62.08  Aligned_cols=102  Identities=13%  Similarity=0.170  Sum_probs=70.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|...++.....|++|+.+.+++++.+..    ++.|.+..   .|.++++-.+++.+...  -.++
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~----~~~Ga~~v---i~~~~~~~~~~i~~~t~--~~g~   98 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV----LQNGAHEV---FNHREVNYIDKIKKYVG--EKGI   98 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH----HHTTCSEE---EETTSTTHHHHHHHHHC--TTCE
T ss_pred             CCCEEEEEeccccccccccccccccCcccccccccccccccc----cccCcccc---cccccccHHHHhhhhhc--cCCc
Confidence            588999999999999999998888999999999887665433    34565433   36666554443333221  1258


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |+++.+.|.            +.               .+..++.++++|++|.++..
T Consensus        99 d~v~d~~g~------------~~---------------~~~~~~~l~~~G~iv~~G~~  129 (174)
T d1yb5a2          99 DIIIEMLAN------------VN---------------LSKDLSLLSHGGRVIVVGSR  129 (174)
T ss_dssp             EEEEESCHH------------HH---------------HHHHHHHEEEEEEEEECCCC
T ss_pred             eEEeecccH------------HH---------------HHHHHhccCCCCEEEEEecC
Confidence            999998772            11               23345667788999998643

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=98.12  E-value=6.4e-06  Score=61.72  Aligned_cols=102  Identities=13%  Similarity=0.172  Sum_probs=68.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|.++||+|+ |++|...+..+...|+ +|+++++++++++..    ++.|.+..+   |..+.+ ..+..+++.+.. +
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a----~~lGa~~vi---~~~~~~-~~~~~~~i~~~~~~   98 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA----EEIGADLTL---NRRETS-VEERRKAIMDITHG   98 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH----HHTTCSEEE---ETTTSC-HHHHHHHHHHHTTT
T ss_pred             CCCEEEEECC-Cccchhheeccccccccccccccccccccccc----ccccceEEE---eccccc-hHHHHHHHHHhhCC
Confidence            5899999987 8999999998888998 699999999877543    344654433   333221 222233444432 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                       .+|++|.++|...                          ..+.....++++|+++.++-
T Consensus        99 ~g~Dvvid~vG~~~--------------------------~~~~a~~~l~~~G~iv~~G~  132 (182)
T d1vj0a2          99 RGADFILEATGDSR--------------------------ALLEGSELLRRGGFYSVAGV  132 (182)
T ss_dssp             SCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             CCceEEeecCCchh--------------------------HHHHHHHHhcCCCEEEEEee
Confidence             5899999998521                          12445566778899988863

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=98.03  E-value=1.8e-05  Score=58.48  Aligned_cols=76  Identities=13%  Similarity=0.089  Sum_probs=56.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .+|+|+|.|+ |.+|+.+|+.|+++|++|++++|+.+.++++.+.    .........+..........+.       ..
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~----~~~~~~~~~~~~~~~~~~~~i~-------~~   68 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG----VQHSTPISLDVNDDAALDAEVA-------KH   68 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT----CTTEEEEECCTTCHHHHHHHHT-------TS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc----ccccccccccccchhhhHhhhh-------cc
Confidence            3789999987 9999999999999999999999999988776543    2344555566666666555443       56


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      |.++....
T Consensus        69 ~~~i~~~~   76 (182)
T d1e5qa1          69 DLVISLIP   76 (182)
T ss_dssp             SEEEECSC
T ss_pred             ceeEeecc
Confidence            77775543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.96  E-value=1e-05  Score=60.50  Aligned_cols=102  Identities=17%  Similarity=0.267  Sum_probs=70.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g   88 (255)
                      +|+++||+||+|++|...+......|+.|+++.+++++.+    .+++.|.+..   .|..+++-.    +++.+..  .
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~----~l~~~Ga~~v---i~~~~~~~~----~~v~~~t~~~   93 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKRE----MLSRLGVEYV---GDSRSVDFA----DEILELTDGY   93 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHH----HHHTTCCSEE---EETTCSTHH----HHHHHHTTTC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeeccccccc----cccccccccc---ccCCccCHH----HHHHHHhCCC
Confidence            4789999999999999999988889999999998876643    3445565533   344554433    3333332  2


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAG  150 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~  150 (255)
                      ++|+++.+.|.            +.+               +.++..++++|++|.++....
T Consensus        94 g~d~v~d~~g~------------~~~---------------~~~~~~l~~~G~~v~~G~~~~  128 (183)
T d1pqwa_          94 GVDVVLNSLAG------------EAI---------------QRGVQILAPGGRFIELGKKDV  128 (183)
T ss_dssp             CEEEEEECCCT------------HHH---------------HHHHHTEEEEEEEEECSCGGG
T ss_pred             CEEEEEecccc------------hHH---------------HHHHHHhcCCCEEEEEccCCC
Confidence            69999999983            112               222455777899999875543

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.95  E-value=1.3e-05  Score=59.78  Aligned_cols=103  Identities=15%  Similarity=0.174  Sum_probs=72.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g-   88 (255)
                      .|++++|+||+|++|...++.....|++|+.+++++++.+..+    +.|.+..   .|.++++-.++    +.+.. | 
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~----~lGa~~v---i~~~~~d~~~~----v~~~t~g~   96 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL----KAGAWQV---INYREEDLVER----LKEITGGK   96 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHH----HHHHTTTC
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH----hcCCeEE---EECCCCCHHHH----HHHHhCCC
Confidence            3889999999999999999998889999999999998865543    3454432   36666544443    33322 3 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY  151 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~  151 (255)
                      .+|+++.+.|...            +               +...+.+++.|+++.++.....
T Consensus        97 g~d~v~d~~g~~~------------~---------------~~~~~~l~~~G~~v~~g~~~~~  132 (179)
T d1qora2          97 KVRVVYDSVGRDT------------W---------------ERSLDCLQRRGLMVSFGNSSGA  132 (179)
T ss_dssp             CEEEEEECSCGGG------------H---------------HHHHHTEEEEEEEEECCCTTCC
T ss_pred             CeEEEEeCccHHH------------H---------------HHHHHHHhcCCeeeecccccCC
Confidence            5899999888421            1               2335567778898887765443

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.92  E-value=0.00016  Score=51.89  Aligned_cols=114  Identities=11%  Similarity=0.040  Sum_probs=73.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +.+++.|.|+ |.+|.+++..|+..|  .+|+++|++++..+....+++..   .........|.   +           
T Consensus         4 ~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~---~-----------   68 (146)
T d1ez4a1           4 NHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEY---S-----------   68 (146)
T ss_dssp             TBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCG---G-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccH---H-----------
Confidence            3668899995 999999999999987  46999999998887777777652   22233334343   1           


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .....|++|.++|....+       ..+-.+.+..|+.-...+.+.+.++- +.+.++++|.
T Consensus        69 ~~~~adivvitag~~~~~-------g~~r~~l~~~N~~i~~~~~~~i~~~~-p~aivivvtN  122 (146)
T d1ez4a1          69 DCKDADLVVITAGAPQKP-------GESRLDLVNKNLNILSSIVKPVVDSG-FDGIFLVAAN  122 (146)
T ss_dssp             GGTTCSEEEECCCC-----------------CHHHHHHHHHHHHHHHHHTT-CCSEEEECSS
T ss_pred             HhccccEEEEecccccCC-------CCCHHHHHHHHHHHHHHHHHHHhhcC-CCcEEEEeCC
Confidence            123689999999964311       13344556777766666666666543 4456666654

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=0.00017  Score=53.03  Aligned_cols=103  Identities=18%  Similarity=0.222  Sum_probs=71.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   88 (255)
                      .|.+++|.|+ |++|...+..+...|+ +|+++++++++++..    ++.|.+.... .+-.+....   .+.+...+| 
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a----~~~Ga~~~~~-~~~~~~~~~---~~~~~~~~g~   96 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA----KEIGADLVLQ-ISKESPQEI---ARKVEGQLGC   96 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCSEEEE-CSSCCHHHH---HHHHHHHHTS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHH----HHhCCccccc-ccccccccc---cccccccCCC
Confidence            4789999986 9999999998888999 599999998876643    3446554333 223334333   333333444 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|++|.+.|..                          ...+.....++++|+++.++-.
T Consensus        97 g~Dvvid~~G~~--------------------------~~~~~a~~~~~~gG~iv~~G~~  130 (171)
T d1pl8a2          97 KPEVTIECTGAE--------------------------ASIQAGIYATRSGGTLVLVGLG  130 (171)
T ss_dssp             CCSEEEECSCCH--------------------------HHHHHHHHHSCTTCEEEECSCC
T ss_pred             CceEEEeccCCc--------------------------hhHHHHHHHhcCCCEEEEEecC
Confidence            699999999942                          1244556677888999998743

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.88  E-value=8.4e-05  Score=53.53  Aligned_cols=118  Identities=13%  Similarity=0.021  Sum_probs=78.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ++-.++++.|+|+ |.+|.+++..++..|.  +++++|++++.++....++.+.    +....+...|.   +       
T Consensus         2 ~~~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~---~-------   70 (148)
T d1ldna1           2 KNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY---D-------   70 (148)
T ss_dssp             TTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG---G-------
T ss_pred             CCCCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH---H-------
Confidence            4556889999996 9999999999999875  5999999998888777777653    22333333332   1       


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                          .+..-|++|.++|....+.    .+   -.+.+..|..-.-.+.+.+.++- +.+.++++|..
T Consensus        71 ----~l~daDvvvitag~~~~~~----~~---R~dl~~~N~~i~~~i~~~i~~~~-p~a~~ivvtNP  125 (148)
T d1ldna1          71 ----DCRDADLVVICAGANQKPG----ET---RLDLVDKNIAIFRSIVESVMASG-FQGLFLVATNP  125 (148)
T ss_dssp             ----GTTTCSEEEECCSCCCCTT----TC---SGGGHHHHHHHHHHHHHHHHHHT-CCSEEEECSSS
T ss_pred             ----HhccceeEEEecccccccC----cc---hhHHHHHHHHHHHHHHHHHHhhC-CCceEEEecCc
Confidence                1236899999999754222    11   12335666655555666666553 55677777654

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.83  E-value=2.7e-05  Score=57.00  Aligned_cols=74  Identities=23%  Similarity=0.297  Sum_probs=56.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .+++++++||.|+ |.+|+.++++|...|+. +.++.|+.++.+++.+++   +.+.    .++   +++...+.     
T Consensus        20 ~~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~---~~~~----~~~---~~~~~~l~-----   83 (159)
T d1gpja2          20 GSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL---GGEA----VRF---DELVDHLA-----   83 (159)
T ss_dssp             SCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH---TCEE----CCG---GGHHHHHH-----
T ss_pred             CCcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhh---hccc----ccc---hhHHHHhc-----
Confidence            3789999999998 99999999999999985 999999998887777665   3222    122   23332222     


Q ss_pred             cCCCcEEEECCCC
Q 025259           87 YGRIDVFVLNAAV   99 (255)
Q Consensus        87 ~g~~d~lv~~ag~   99 (255)
                        ..|++|++.+.
T Consensus        84 --~~Divi~atss   94 (159)
T d1gpja2          84 --RSDVVVSATAA   94 (159)
T ss_dssp             --TCSEEEECCSS
T ss_pred             --cCCEEEEecCC
Confidence              79999999884

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.83  E-value=1.8e-05  Score=50.33  Aligned_cols=44  Identities=25%  Similarity=0.206  Sum_probs=38.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV   53 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~   53 (255)
                      .++.++||+||+||+|...+..+...|++|+.+.+++++.+-+.
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~   73 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK   73 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence            36889999999999999999988888999999999988765543

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.83  E-value=2.5e-05  Score=55.23  Aligned_cols=72  Identities=13%  Similarity=0.216  Sum_probs=56.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +|+|.|+ |.+|+.+++.|.+.|+.|++++.+++..++..++   .  ...++..|.++++.++++-      ....|.+
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~---~--~~~vi~Gd~~~~~~l~~~~------i~~a~~v   69 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---I--DALVINGDCTKIKTLEDAG------IEDADMY   69 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---C--SSEEEESCTTSHHHHHHTT------TTTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh---h--hhhhccCcccchhhhhhcC------hhhhhhh
Confidence            5788987 9999999999999999999999999888765543   2  3457889999988876551      1267877


Q ss_pred             EECC
Q 025259           94 VLNA   97 (255)
Q Consensus        94 v~~a   97 (255)
                      +...
T Consensus        70 v~~t   73 (132)
T d1lssa_          70 IAVT   73 (132)
T ss_dssp             EECC
T ss_pred             cccC
Confidence            7653

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.74  E-value=5.5e-05  Score=55.83  Aligned_cols=77  Identities=13%  Similarity=0.141  Sum_probs=58.5

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++||+++|.|+ ||.+++++..|.+.|.+|.++.|+.++.+++.+.+.+.+ .+..+.  ..+.            ..
T Consensus        14 ~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~-~~~~~~--~~~~------------~~   77 (170)
T d1nyta1          14 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTG-SIQALS--MDEL------------EG   77 (170)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGS-SEEECC--SGGG------------TT
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhcc-cccccc--cccc------------cc
Confidence            4678999999997 788999999999999999999999999988888776554 232222  2110            11


Q ss_pred             CCCcEEEECCCCC
Q 025259           88 GRIDVFVLNAAVN  100 (255)
Q Consensus        88 g~~d~lv~~ag~~  100 (255)
                      ...|++||+....
T Consensus        78 ~~~dliIN~Tp~G   90 (170)
T d1nyta1          78 HEFDLIINATSSG   90 (170)
T ss_dssp             CCCSEEEECCSCG
T ss_pred             cccceeecccccC
Confidence            3689999997654

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.73  E-value=0.00011  Score=54.22  Aligned_cols=78  Identities=12%  Similarity=0.167  Sum_probs=60.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ..++++|+++|.|+ ||.+++++..|.+.+.+|+++.|+.++.+...+.++..+ ++.....|..              .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~-~~~~~~~~~~--------------~   76 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSI--------------P   76 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGS-CEEEEEGGGC--------------C
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhcc-ccchhhhccc--------------c
Confidence            34678999999976 677999999999888889999999999999888886553 4444443321              1


Q ss_pred             cCCCcEEEECCCCC
Q 025259           87 YGRIDVFVLNAAVN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                      ....|++||+....
T Consensus        77 ~~~~diiIN~tp~g   90 (171)
T d1p77a1          77 LQTYDLVINATSAG   90 (171)
T ss_dssp             CSCCSEEEECCCC-
T ss_pred             ccccceeeeccccc
Confidence            24789999998764

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=97.69  E-value=0.00072  Score=49.84  Aligned_cols=118  Identities=11%  Similarity=0.010  Sum_probs=72.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcC---C----eEEEEeCCh--hHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEG---A----SVVISSRKQ--KNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G---~----~Vv~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+|.||||+|.||.+++..|+...   .    .+.+++...  +.++...-+++... .....+..- ++..       
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~~-~~~~-------   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSIG-IDPY-------   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEE-SCHH-------
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCcccc-ccch-------
Confidence            4479999999999999999999753   2    355566654  34455555555542 122222211 2211       


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                         +.+...|++|..+|....+    ..+   ..+.++.|..=.-.+.+.+.++-.+...|+.++.
T Consensus        96 ---~~~~~aDvVvi~ag~~rkp----g~t---R~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~N  151 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRGP----GME---RAALLDINGQIFADQGKALNAVASKNVKVLVVGN  151 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCCT----TCC---HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---hhccCCceEEEeeccCCCC----CCc---HHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEecC
Confidence               1223799999999975422    233   4445778877777777777766544556666654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=97.67  E-value=6.3e-05  Score=55.76  Aligned_cols=99  Identities=19%  Similarity=0.237  Sum_probs=66.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-C
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-G   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g   88 (255)
                      .|.+++|.|+ |++|...+......|+ +|+++++++++++...    +.|....   .|..+++..    +++.+.. +
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~----~lGa~~~---i~~~~~~~~----~~v~~~t~g   94 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK----FYGATDI---LNYKNGHIE----DQVMKLTNG   94 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH----HHTCSEE---ECGGGSCHH----HHHHHHTTT
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH----hhCcccc---ccccchhHH----HHHHHHhhc
Confidence            4889999976 8999999988888898 5999999987765543    3454332   344443332    3333332 2


Q ss_pred             -CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 -RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 -~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                       .+|++|.++|...                          ..+..+..++++|+++.++-
T Consensus        95 ~G~D~vid~~g~~~--------------------------~~~~a~~~~~~~G~iv~~G~  128 (174)
T d1jqba2          95 KGVDRVIMAGGGSE--------------------------TLSQAVKMVKPGGIISNINY  128 (174)
T ss_dssp             SCEEEEEECSSCTT--------------------------HHHHHHHHEEEEEEEEECCC
T ss_pred             cCcceEEEccCCHH--------------------------HHHHHHHHHhcCCEEEEEee
Confidence             4999999999532                          12334455677889988763

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.66  E-value=0.00011  Score=54.09  Aligned_cols=97  Identities=15%  Similarity=0.304  Sum_probs=65.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|+++||+||+|++|...+......|++|+.+++++++.+..    ++.|.+..+   |..+.  .    +++. ...++
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~----~~lGa~~~i---~~~~~--~----~~~~-~~~g~   92 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP----LALGAEEAA---TYAEV--P----ERAK-AWGGL   92 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH----HHTTCSEEE---EGGGH--H----HHHH-HTTSE
T ss_pred             CCCEEEEEeccccchhhhhhhhcccccccccccccccccccc----cccccceee---ehhhh--h----hhhh-ccccc
Confidence            689999999999999999988888899999999988766543    345654432   33321  1    2222 23479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      |+++.+.|. .            +               +..+..++++|+++.++...
T Consensus        93 D~v~d~~G~-~------------~---------------~~~~~~l~~~G~~v~~G~~~  123 (171)
T d1iz0a2          93 DLVLEVRGK-E------------V---------------EESLGLLAHGGRLVYIGAAE  123 (171)
T ss_dssp             EEEEECSCT-T------------H---------------HHHHTTEEEEEEEEEC----
T ss_pred             cccccccch-h------------H---------------HHHHHHHhcCCcEEEEeCCC
Confidence            999997762 1            1               22356778889999987543

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.65  E-value=0.00022  Score=51.02  Aligned_cols=116  Identities=16%  Similarity=0.141  Sum_probs=74.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++.|+||+|.+|.+++..|+..|.  +++++|.++.+.+  ..++..... ......-+ ...+....+       ...|
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~--a~Dl~~~~~-~~~~~~~~-~~~~~~~~~-------~~aD   70 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGV--AADLSHIET-RATVKGYL-GPEQLPDCL-------KGCD   70 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHH--HHHHTTSSS-SCEEEEEE-SGGGHHHHH-------TTCS
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchh--hHHHhhhhh-hcCCCeEE-cCCChHHHh-------CCCC
Confidence            689999999999999999998875  3999999865433  234443221 11111112 222222222       2699


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|..+|...  .+-  .+.   .+.++.|..-.-.+.+.+.++ .+.+.++.+|..
T Consensus        71 ivVitag~~~--~~g--~sR---~~ll~~N~~i~~~i~~~i~~~-~p~~iiivvtNP  119 (144)
T d1mlda1          71 VVVIPAGVPR--KPG--MTR---DDLFNTNATIVATLTAACAQH-CPDAMICIISNP  119 (144)
T ss_dssp             EEEECCSCCC--CTT--CCG---GGGHHHHHHHHHHHHHHHHHH-CTTSEEEECSSC
T ss_pred             EEEECCCcCC--CCC--CCc---chHHHHHHHHHHHHHHHHHhc-CCCeEEEEecCc
Confidence            9999999643  221  232   334888888888888888776 456677777654

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=97.65  E-value=0.00039  Score=50.23  Aligned_cols=117  Identities=15%  Similarity=0.126  Sum_probs=72.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC---------eEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA---------SVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~---------~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      -+|.|+||+|.+|.+++..|+..+.         .++..+++.+.++....++.... .....+...-.+.+        
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh--------
Confidence            3899999999999999999997653         12333445555555555554432 23333333322221        


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                         .+...|++|.++|....    ...+.+   +.++.|+.-.-.+.+.+.++-.+...|+.+|.
T Consensus        77 ---~~~~advViitaG~~~~----pg~~r~---dl~~~N~~i~~~~~~~i~k~a~~~~~vivvsN  131 (154)
T d1y7ta1          77 ---AFKDADYALLVGAAPRK----AGMERR---DLLQVNGKIFTEQGRALAEVAKKDVKVLVVGN  131 (154)
T ss_dssp             ---HTTTCSEEEECCCCCCC----TTCCHH---HHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---hcccccEEEeecCcCCC----CCCcHH---HHHHHHHHHHHHHHHHHHHhCCCCcEEEEecC
Confidence               12379999999997532    223444   44777877777777777765444556666653

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.63  E-value=0.00011  Score=56.60  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=55.8

Q ss_pred             cccCCCCEEEEeCC----------------CCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecC
Q 025259            7 AKRFQGKVAVVTAS----------------TQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHV   70 (255)
Q Consensus         7 ~~~l~~k~vlVtG~----------------~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~   70 (255)
                      +.+|+|++||||+|                ||..|.++|+.+...|++|.++......         .....+..+  .+
T Consensus         1 ~~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~---------~~p~~~~~~--~~   69 (223)
T d1u7za_           1 VNDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL---------PTPPFVKRV--DV   69 (223)
T ss_dssp             CCTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC---------CCCTTEEEE--EC
T ss_pred             CcccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhccccc---------Ccccccccc--ee
Confidence            36899999999987                4578999999999999999887554321         001223333  34


Q ss_pred             CCHHHHHHHHHHHHHHcCCCcEEEECCCCCC
Q 025259           71 SNEQHRKNLIDKTVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        71 ~~~~~~~~~~~~~~~~~g~~d~lv~~ag~~~  101 (255)
                      ...+++..   .+.+.+...|++|++|++..
T Consensus        70 ~t~~~m~~---~~~~~~~~~D~~i~aAAvsD   97 (223)
T d1u7za_          70 MTALEMEA---AVNASVQQQNIFIGCAAVAD   97 (223)
T ss_dssp             CSHHHHHH---HHHHHGGGCSEEEECCBCCS
T ss_pred             hhhHHHHH---HHHhhhccceeEeeeechhh
Confidence            44444443   34444557899999999875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.63  E-value=4.7e-05  Score=57.10  Aligned_cols=104  Identities=18%  Similarity=0.259  Sum_probs=64.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +++|||+||+|++|...++-....|+. |+.+.++++.......+   .+.+..   .|..+++..+. ++++..  .++
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~---~gad~v---i~~~~~~~~~~-~~~~~~--~Gv  101 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSE---LGFDAA---VNYKTGNVAEQ-LREACP--GGV  101 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHH---SCCSEE---EETTSSCHHHH-HHHHCT--TCE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhc---ccceEE---eeccchhHHHH-HHHHhc--cCc
Confidence            489999999999999999888778997 44556666555444333   344433   35554443222 333321  369


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCcc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGY  151 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~  151 (255)
                      |+++.+.|.            +               ..+...+.++++|+++.+++..++
T Consensus       102 Dvv~D~vGg------------~---------------~~~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         102 DVYFDNVGG------------D---------------ISNTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             EEEEESSCH------------H---------------HHHHHHTTEEEEEEEEEC------
T ss_pred             eEEEecCCc------------h---------------hHHHHhhhccccccEEEecccccc
Confidence            999999983            1               123456778889999998876554

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.63  E-value=0.00016  Score=53.33  Aligned_cols=101  Identities=11%  Similarity=0.164  Sum_probs=66.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeE-EEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASV-VISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~V-v~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+++|.|+ |++|...+..+...|+.+ +++++++++++..+    +.|....   .|..+++..++ +.++  .-++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~----~~Ga~~~---i~~~~~~~~~~-i~~~--t~gg   96 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK----QLGATHV---INSKTQDPVAA-IKEI--TDGG   96 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH----HHTCSEE---EETTTSCHHHH-HHHH--TTSC
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH----HcCCeEE---EeCCCcCHHHH-HHHH--cCCC
Confidence            5889999987 899999998888889874 56677776655433    3354332   24444433332 2222  1257


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|++|.+.|..           +               ..+.....++++|+++.++..
T Consensus        97 ~D~vid~~G~~-----------~---------------~~~~~~~~~~~~G~i~~~G~~  129 (174)
T d1f8fa2          97 VNFALESTGSP-----------E---------------ILKQGVDALGILGKIAVVGAP  129 (174)
T ss_dssp             EEEEEECSCCH-----------H---------------HHHHHHHTEEEEEEEEECCCC
T ss_pred             CcEEEEcCCcH-----------H---------------HHHHHHhcccCceEEEEEeec
Confidence            99999999942           1               122345667888999988753

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.61  E-value=0.00022  Score=52.28  Aligned_cols=99  Identities=20%  Similarity=0.189  Sum_probs=65.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++..    ++.|.+..+...+..+  .    .+   ...+.+
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a----~~lGa~~~i~~~~~~~--~----~~---~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDA----MKMGADHYIATLEEGD--W----GE---KYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHH----HHHTCSEEEEGGGTSC--H----HH---HSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHh----hccCCcEEeeccchHH--H----HH---hhhccc
Confidence            5889999986 8999998887777899999999999887553    3446554332222211  1    11   223478


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      |.++.+.+... ...+.                       .....++++|+++.++-
T Consensus        93 d~vi~~~~~~~-~~~~~-----------------------~~~~~l~~~G~iv~~G~  125 (168)
T d1piwa2          93 DLIVVCASSLT-DIDFN-----------------------IMPKAMKVGGRIVSISI  125 (168)
T ss_dssp             EEEEECCSCST-TCCTT-----------------------TGGGGEEEEEEEEECCC
T ss_pred             ceEEEEecCCc-cchHH-----------------------HHHHHhhccceEEEecc
Confidence            99999887532 11111                       23566778899998863

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=97.54  E-value=0.00087  Score=47.85  Aligned_cols=117  Identities=11%  Similarity=-0.025  Sum_probs=72.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      |++.|+|+ |.+|.+++..|+.+|.  +++++|++++.++....++++.    +.+......|   .+.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d---~~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIND---WAA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESC---GGG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccC---HHH-----------
Confidence            78899995 9999999999998874  5999999998887777777643    2223333322   221           


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +..-|++|.+||...   ...+.+..+-.+.++.|..=.-.+.+.+.++- +.+.++++|..
T Consensus        67 l~~adiVVitaG~~~---~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtNP  124 (146)
T d1hyha1          67 LADADVVISTLGNIK---LQQDNPTGDRFAELKFTSSMVQSVGTNLKESG-FHGVLVVISNP  124 (146)
T ss_dssp             GTTCSEEEECCSCGG---GTC-------CTTHHHHHHHHHHHHHHHHHTT-CCSEEEECSSS
T ss_pred             hccccEEEEeccccc---cccccCCccHHHHHHHHHHHHHHHHHHHhhcC-CCeEEEEecCc
Confidence            126899999999642   11111122233446667655555555555432 55667777654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=97.54  E-value=0.00021  Score=52.14  Aligned_cols=99  Identities=15%  Similarity=0.240  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|++++|.|+ |++|...+..+...|++|+.+++++++++..    ++.|.+..+   |.++++..+.+.    +..++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a----~~~Ga~~~i---~~~~~~~~~~~~----~~~~g~   94 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA----RKLGASLTV---NARQEDPVEAIQ----RDIGGA   94 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH----HHTTCSEEE---ETTTSCHHHHHH----HHHSSE
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh----hccCccccc---cccchhHHHHHH----HhhcCC
Confidence            4889999886 9999998888888899999999998876543    345654432   445544443332    233456


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +..|.+++..           +               ..+...+.++++|+++.++-
T Consensus        95 ~~~i~~~~~~-----------~---------------~~~~~~~~l~~~G~iv~~G~  125 (166)
T d1llua2          95 HGVLVTAVSN-----------S---------------AFGQAIGMARRGGTIALVGL  125 (166)
T ss_dssp             EEEEECCSCH-----------H---------------HHHHHHTTEEEEEEEEECCC
T ss_pred             cccccccccc-----------h---------------HHHHHHHHhcCCcEEEEEEe
Confidence            6556555521           1               12335677788899998863

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.51  E-value=0.0013  Score=46.89  Aligned_cols=113  Identities=14%  Similarity=0.110  Sum_probs=71.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChh--HHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQK--NVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~--~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ++.|+||+|.+|.+++..++..|.  +++++|+++.  .++....++...    ..........-.+.+           
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~d~~-----------   70 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDENLR-----------   70 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETTCGG-----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcchHH-----------
Confidence            489999999999999999999884  6999999863  345555556542    222222111111211           


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      .+..-|++|.+||....+    ..+.   .+.++.|..=.-.+.+.+.++- + ..|+.+|
T Consensus        71 ~l~~aDvVVitAG~~~~~----g~sR---~dl~~~Na~iv~~i~~~i~~~~-~-~~iivVt  122 (145)
T d1hyea1          71 IIDESDVVIITSGVPRKE----GMSR---MDLAKTNAKIVGKYAKKIAEIC-D-TKIFVIT  122 (145)
T ss_dssp             GGTTCSEEEECCSCCCCT----TCCH---HHHHHHHHHHHHHHHHHHHHHC-C-CEEEECS
T ss_pred             HhccceEEEEecccccCC----CCCh---hhhhhhhHHHHHHHHHHHhccC-C-CeEEEEc
Confidence            122699999999974322    2233   3457788887777777777663 3 3455454

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=97.50  E-value=0.00093  Score=48.42  Aligned_cols=117  Identities=10%  Similarity=0.066  Sum_probs=77.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      .+..+++.|.|+ |.+|.+++..++..|.  +++++|++++..+....++++.    +........|.   +.       
T Consensus        17 ~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~---~~-------   85 (160)
T d1i0za1          17 TVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDY---SV-------   85 (160)
T ss_dssp             CCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSG---GG-------
T ss_pred             cCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccch---hh-------
Confidence            456789999996 9999999999999986  5999999998888777777652    22222222222   21       


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                          ...-|++|..||....++    .+.   .+.+..|..-.-.+...+.+. .+.+-++++|..
T Consensus        86 ----~~~adiVVitAg~~~~~g----~tR---~~l~~~N~~i~~~i~~~i~~~-~p~aiiivvtNP  139 (160)
T d1i0za1          86 ----TANSKIVVVTAGVRQQEG----ESR---LNLVQRNVNVFKFIIPQIVKY-SPDCIIIVVSNP  139 (160)
T ss_dssp             ----GTTCSEEEECCSCCCCTT----CCG---GGGHHHHHHHHHHHHHHHHHH-CTTCEEEECSSS
T ss_pred             ----cccccEEEEecCCccccC----cch---HHHHHHHHHHHHHHHHHHHhc-CCCcEEEEeCCc
Confidence                236999999999753221    222   344566766555555555554 245667777654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.49  E-value=0.0002  Score=52.50  Aligned_cols=101  Identities=11%  Similarity=0.127  Sum_probs=68.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC-
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG-   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-   88 (255)
                      .+.+++|+|++|++|...+..+...|. .|+++++++++.+...    +.|.+..   .|.++++..++..+.   ..+ 
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~----~~Ga~~~---i~~~~~~~~~~~~~~---~~~~   96 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK----RAGADYV---INASMQDPLAEIRRI---TESK   96 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH----HHTCSEE---EETTTSCHHHHHHHH---TTTS
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH----HcCCcee---eccCCcCHHHHHHHH---hhcc
Confidence            478999999999999999999988885 6889999987755443    3465433   234444443433322   223 


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .+|+++.++|...           .               .+.....++++|+++.++-
T Consensus        97 ~~d~vid~~g~~~-----------~---------------~~~a~~~l~~~G~iv~~G~  129 (170)
T d1jvba2          97 GVDAVIDLNNSEK-----------T---------------LSVYPKALAKQGKYVMVGL  129 (170)
T ss_dssp             CEEEEEESCCCHH-----------H---------------HTTGGGGEEEEEEEEECCS
T ss_pred             cchhhhcccccch-----------H---------------HHhhhhhcccCCEEEEecc
Confidence            5899999998421           1               1223566778899998864

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.47  E-value=7.6e-05  Score=52.58  Aligned_cols=73  Identities=14%  Similarity=0.174  Sum_probs=55.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |+++|.|. |-+|+++++.|.+.|+.|++++.+++..++..    +.+.  ..+.+|.++++.++++-      ....|.
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~----~~~~--~~~~gd~~~~~~l~~a~------i~~a~~   67 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA----SYAT--HAVIANATEENELLSLG------IRNFEY   67 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT----TTCS--EEEECCTTCTTHHHHHT------GGGCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH----HhCC--cceeeecccchhhhccC------CccccE
Confidence            56788866 78999999999999999999999998876643    3343  34568999988876541      125788


Q ss_pred             EEECCC
Q 025259           93 FVLNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      +|...+
T Consensus        68 vi~~~~   73 (134)
T d2hmva1          68 VIVAIG   73 (134)
T ss_dssp             EEECCC
T ss_pred             EEEEcC
Confidence            777666

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=97.45  E-value=0.0015  Score=48.12  Aligned_cols=80  Identities=16%  Similarity=0.147  Sum_probs=54.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+++|.|+ ||+|...+..+...|+ +|+.+++++++++...    +.|.+..+..-|-.+  ..+...+..  ....
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak----~~GA~~~in~~~~~~--~~~~~~~~~--~g~G   99 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM----AVGATECISPKDSTK--PISEVLSEM--TGNN   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH----HHTCSEEECGGGCSS--CHHHHHHHH--HTSC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH----hcCCcEEECccccch--HHHHHHHHh--cccc
Confidence            5889999986 8999999999999996 6999999999876543    336555443323221  112222211  1247


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|++|.+.|.
T Consensus       100 ~d~vi~~~g~  109 (176)
T d1d1ta2         100 VGYTFEVIGH  109 (176)
T ss_dssp             CCEEEECSCC
T ss_pred             ceEEEEeCCc
Confidence            9999999995

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.44  E-value=0.0003  Score=51.95  Aligned_cols=42  Identities=21%  Similarity=0.221  Sum_probs=37.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVE   54 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~   54 (255)
                      +|++.|.|+ |.+|.+++..|++.|++|.+++|+++..+...+
T Consensus         1 sk~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~   42 (184)
T d1bg6a2           1 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQD   42 (184)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred             CCEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence            588999998 899999999999999999999999887766543

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=97.40  E-value=0.0032  Score=44.54  Aligned_cols=113  Identities=12%  Similarity=-0.000  Sum_probs=73.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCC--hhHHHHHHHHHHH---cCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRK--QKNVDKAVEKLKA---LGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~--~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++.|+|++|.+|.+++..++.+|.  .++++|.+  ++..+....++.+   ...+..+...|.   ++           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~---~~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGY---ED-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCG---GG-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCH---HH-----------
Confidence            688999999999999999999875  48999964  3445555555654   233333333332   21           


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ...-|++|..||...  ++-  .+   -.+.++.|..=.-.+.+.+.++- +.+.++.++..
T Consensus        68 ~~~aDiVvitaG~~~--~~g--~~---R~dl~~~N~~I~~~i~~~i~~~~-p~~i~ivvtNP  121 (142)
T d1o6za1          68 TAGSDVVVITAGIPR--QPG--QT---RIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNP  121 (142)
T ss_dssp             GTTCSEEEECCCCCC--CTT--CC---HHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSS
T ss_pred             hhhcCEEEEeccccc--ccC--Cc---hhhHHHHHHHHHHHHHHHHHhcC-CCceEEEecCh
Confidence            236999999999643  221  23   45567888776666666666553 45666666543

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=97.38  E-value=0.00025  Score=53.44  Aligned_cols=116  Identities=14%  Similarity=0.148  Sum_probs=70.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+|+|.|+ |++|...+......|+ .|+++++++++++..    ++.|....   .|-.+++..++. .++. ....
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a----~~~Ga~~~---~~~~~~~~~~~i-~~~t-~g~g   94 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHA----KAQGFEIA---DLSLDTPLHEQI-AALL-GEPE   94 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH----HHTTCEEE---ETTSSSCHHHHH-HHHH-SSSC
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhh----hhccccEE---EeCCCcCHHHHH-HHHh-CCCC
Confidence            4889999986 8999888877777787 588899998776443    34465432   233333332222 2221 1236


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +|++|.+.|.-....+..           ..+..+.-..++.....++++|+|+.++-
T Consensus        95 ~D~vid~vG~~~~~~~~~-----------~~~~~~~~~~l~~~~~~~r~gG~v~~~G~  141 (195)
T d1kola2          95 VDCAVDAVGFEARGHGHE-----------GAKHEAPATVLNSLMQVTRVAGKIGIPGL  141 (195)
T ss_dssp             EEEEEECCCTTCBCSSTT-----------GGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred             cEEEEECccccccCCccc-----------ceeecCcHHHHHHHHHHHhcCCEEEEeee
Confidence            899999998532111110           01122333345666667788899998874

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=97.37  E-value=0.00083  Score=48.41  Aligned_cols=121  Identities=12%  Similarity=0.052  Sum_probs=76.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |.+++.|.|+ |.+|..++..++..+. +++++|.+++.++....+++..    +...... ++ ++.+   ..+     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~~---~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSYE---AAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSHH---HHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cchh---hhh-----
Confidence            3678888997 9999999998888885 6999999998887777776542    2222211 11 2221   111     


Q ss_pred             HcCCCcEEEECCCCCCCCCC-cCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           86 KYGRIDVFVLNAAVNPYAAD-LLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~-~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                        ..-|++|.++|....++. -...+   -.+.+..|..-...+.+.+.++- +.+.++.+|..
T Consensus        75 --~~adiVvitag~~~~~g~~~~~~t---R~~l~~~n~~iv~~i~~~i~~~~-p~aiviivsNP  132 (154)
T d1pzga1          75 --TGADCVIVTAGLTKVPGKPDSEWS---RNDLLPFNSKIIREIGQNIKKYC-PKTFIIVVTNP  132 (154)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCC---GGGGHHHHHHHHHHHHHHHHHHC-TTCEEEECCSS
T ss_pred             --cCCCeEEEecccccCCCCCCcccc---hhhhhhhhHHHHHHHHHHHHhcC-CCcEEEEeCCc
Confidence              269999999997543321 11122   23346667766666666666553 45666666643

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.34  E-value=0.003  Score=44.85  Aligned_cols=115  Identities=16%  Similarity=0.152  Sum_probs=73.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-C--CeEEEEeCChhHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-G--ASVVISSRKQKNVDKAVEKLKALGIEVI-GIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++.|+|++|.+|.+++..|+.+ +  .+++++|..+ ..+...-++++...... .....-.+.+.    ++       .
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h~~~~~~~~~~~~~~~~~~----~~-------~   69 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA----LE-------G   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHTSCSSCEEEEECSSCCHHH----HT-------T
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHCCccccCCcEEEcCCCccc----cC-------C
Confidence            5789999999999999988653 3  5699999865 45555566666432221 11222223222    22       5


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      -|++|.++|....++    .+   -.+.++.|..-.-.+.+.+.++- +.+.++.+|..
T Consensus        70 aDvvvitaG~~~k~g----~~---R~dl~~~N~~i~~~v~~~i~~~~-p~aivivvtNP  120 (145)
T d2cmda1          70 ADVVLISAGVRRKPG----MD---RSDLFNVNAGIVKNLVQQVAKTC-PKACIGIITNP  120 (145)
T ss_dssp             CSEEEECCSCCCCTT----CC---GGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred             CCEEEECCCccCCCC----cc---hhhHHHHHHHHHHHHHHHHHhhC-CCcEEEEccCC
Confidence            899999999753222    23   33447888777777777777654 45667777654

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=97.29  E-value=0.00013  Score=53.57  Aligned_cols=103  Identities=19%  Similarity=0.107  Sum_probs=70.0

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-CC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-GR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~   89 (255)
                      ++++|||+||+||+|...+......|++|+.+.+++++.+.+    ++.+.+..+..-|     ..   .+.+.... ++
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~----~~lGad~vi~~~~-----~~---~~~~~~~~~~g   90 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL----KQLGASEVISRED-----VY---DGTLKALSKQQ   90 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH----HHHTCSEEEEHHH-----HC---SSCCCSSCCCC
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH----HhhcccceEeccc-----hh---chhhhcccCCC
Confidence            577899999999999999977777899999999998876554    3446554322111     00   11111112 36


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQ  152 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~  152 (255)
                      +|+++.+.|..                           ..+..++.++++|++|.++...+..
T Consensus        91 vd~vid~vgg~---------------------------~~~~~~~~l~~~G~iv~~G~~~g~~  126 (167)
T d1tt7a2          91 WQGAVDPVGGK---------------------------QLASLLSKIQYGGSVAVSGLTGGGE  126 (167)
T ss_dssp             EEEEEESCCTH---------------------------HHHHHHTTEEEEEEEEECCCSSCSC
T ss_pred             ceEEEecCcHH---------------------------HHHHHHHHhccCceEEEeeccCCCc
Confidence            89999998841                           2234567788889999998776543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=97.28  E-value=0.0055  Score=43.31  Aligned_cols=114  Identities=13%  Similarity=0.080  Sum_probs=73.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++.|+|+ |.+|.+++..++..|.  +++++|++++.++....++++.   .....+...  .+.+.    +       
T Consensus         2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~--~~~~~----~-------   67 (143)
T d1llda1           2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS--DDPEI----C-------   67 (143)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE--SCGGG----G-------
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecC--CCHHH----h-------
Confidence            46788896 9999999999999875  5999999998887766667653   112222221  11111    1       


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..-|++|..||....+    ..+..   +.+..|..=.-.+.+.+.++- +.+.++.+|..
T Consensus        68 ~daDvVVitaG~~~~~----g~~R~---dl~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNP  120 (143)
T d1llda1          68 RDADMVVITAGPRQKP----GQSRL---ELVGATVNILKAIMPNLVKVA-PNAIYMLITNP  120 (143)
T ss_dssp             TTCSEEEECCCCCCCT----TCCHH---HHHHHHHHHHHHHHHHHHHHC-TTSEEEECCSS
T ss_pred             hCCcEEEEecccccCC----CCchh---hhhhhhHHHHHHHHHHHHhhC-CCeEEEEeCCc
Confidence            2589999999974322    23333   457777766666666665543 45666666643

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=97.27  E-value=0.00057  Score=48.63  Aligned_cols=113  Identities=12%  Similarity=0.039  Sum_probs=69.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      +++.|.|+ |.+|.+++..++.++.  +++++|++++.++....++.+..   ........   +.+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~---~~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAG---DYS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC-----CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeC---cHH-----------Hh
Confidence            35666786 9999999999999875  59999999987776666776531   22222111   111           12


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..-|++|..||....+.       +.-.+.+..|..=...+.+.+.++- +.+.++++|..
T Consensus        67 ~~adivvitag~~~~~~-------~~r~~l~~~N~~i~~~i~~~i~~~~-p~ai~ivvtNP  119 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKPG-------ETRLDLAKKNVMIAKEVTQNIMKYY-NHGVILVVSNP  119 (142)
T ss_dssp             TTCSEEEECCCC-------------CHHHHHHHHHHHHHHHHHHHHHHC-CSCEEEECSSS
T ss_pred             CCCceEEEecccccCcC-------cchhHHhhHHHHHHHHHHHHhhccC-CCceEEEecCh
Confidence            36899999999643211       2234557788776666666666643 45667766643

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00023  Score=52.76  Aligned_cols=104  Identities=17%  Similarity=0.122  Sum_probs=69.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+++++||+||+||+|...++.....|++|+.+.+++++.+..    ++.|.+..+..-|....       +.+.  ...
T Consensus        30 ~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~----~~lGad~vi~~~~~~~~-------~~l~--~~~   96 (177)
T d1o89a2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL----KSLGASRVLPRDEFAES-------RPLE--KQV   96 (177)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH----HHHTEEEEEEGGGSSSC-------CSSC--CCC
T ss_pred             CCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH----HhhccccccccccHHHH-------HHHH--hhc
Confidence            3456999999999999999988888999999999998885443    33354443322221111       1111  124


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQP  153 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~  153 (255)
                      .|.+|.+.|.            +               .....++.+++.|++|.++...+...
T Consensus        97 ~~~vvD~Vgg------------~---------------~~~~~l~~l~~~Griv~~G~~~~~~~  133 (177)
T d1o89a2          97 WAGAIDTVGD------------K---------------VLAKVLAQMNYGGCVAACGLAGGFTL  133 (177)
T ss_dssp             EEEEEESSCH------------H---------------HHHHHHHTEEEEEEEEECCCTTCSCC
T ss_pred             CCeeEEEcch------------H---------------HHHHHHHHhccccceEeecccCCccc
Confidence            6888887762            1               13456677888899999987766543

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.22  E-value=0.00057  Score=46.49  Aligned_cols=46  Identities=11%  Similarity=0.156  Sum_probs=38.2

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      |.-.-+..+++||++||.|++. +|..-++.|++.|+.|++++....
T Consensus         1 M~~~Pi~l~l~~k~vlVvG~G~-va~~ka~~ll~~ga~v~v~~~~~~   46 (113)
T d1pjqa1           1 MDHLPIFCQLRDRDCLIVGGGD-VAERKARLLLEAGARLTVNALTFI   46 (113)
T ss_dssp             CCCEEEEECCBTCEEEEECCSH-HHHHHHHHHHHTTBEEEEEESSCC
T ss_pred             CCccceEEEeCCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEeccCC
Confidence            4444456789999999999865 999999999999999988876543

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.00086  Score=48.90  Aligned_cols=97  Identities=20%  Similarity=0.258  Sum_probs=66.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.+|+|.|+ |++|...+......|++++++++++++.+..    ++.|.+..   .|..+++....       ...++
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a----~~lGad~~---i~~~~~~~~~~-------~~~~~   94 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAA----KALGADEV---VNSRNADEMAA-------HLKSF   94 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHH----HHHTCSEE---EETTCHHHHHT-------TTTCE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHH----hccCCcEE---EECchhhHHHH-------hcCCC
Confidence            4889999986 8999999888888899999999988876432    33454433   35555544321       22479


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      |++|.+.|...   .        +               +.....++++|+++.++..
T Consensus        95 D~vid~~g~~~---~--------~---------------~~~~~~l~~~G~iv~~G~~  126 (168)
T d1uufa2          95 DFILNTVAAPH---N--------L---------------DDFTTLLKRDGTMTLVGAP  126 (168)
T ss_dssp             EEEEECCSSCC---C--------H---------------HHHHTTEEEEEEEEECCCC
T ss_pred             ceeeeeeecch---h--------H---------------HHHHHHHhcCCEEEEeccC
Confidence            99999998532   0        1               2334567788899988643

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=97.20  E-value=0.0048  Score=43.50  Aligned_cols=112  Identities=12%  Similarity=0.089  Sum_probs=72.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.|+|+ |.+|.+++..++..|  .+++++|++++.++.....+...    ..+..+...  .+.++           +
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~--~~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGS--NDYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEec--CCHHH-----------h
Confidence            4778896 999999999999987  36999999998877665555432    223333222  22222           1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ...|++|.++|....++    .+.   .+.++.|..=...+.+.+.++- +.+.++++|.
T Consensus        68 ~dadvvvitag~~~~~g----~~r---~~l~~~N~~i~~~i~~~i~~~~-p~aivivvtN  119 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG----MTR---EDLLMKNAGIVKEVTDNIMKHS-KNPIIIVVSN  119 (142)
T ss_dssp             TTCSEEEECCSCCCCTT----CCH---HHHHHHHHHHHHHHHHHHHHHC-SSCEEEECCS
T ss_pred             cCCeEEEEEEecCCCCC----Cch---HHHHHHHHHHHHHHHHHhhccC-CCeEEEEecC
Confidence            26899999999753222    222   3446677766666666666553 5566666654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.0002  Score=47.06  Aligned_cols=38  Identities=18%  Similarity=0.257  Sum_probs=34.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      +++||+++|.|. |..|.++++.|++.|++|.+.|.+..
T Consensus         2 ~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~   39 (93)
T d2jfga1           2 DYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT   39 (93)
T ss_dssp             CCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred             CcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence            689999999988 66899999999999999999998654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.16  E-value=0.00097  Score=48.26  Aligned_cols=116  Identities=9%  Similarity=0.107  Sum_probs=71.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++..++.|+|+ |.+|.+++..|+..|.  +++++|++++.++....++++.    +........|.   +         
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~---~---------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDY---N---------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSG---G---------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccch---h---------
Confidence            45567888885 9999999999999875  5999999998888887888753    22222222232   1         


Q ss_pred             HHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           84 VEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                        ....-|++|..||....+.    .+..   +.++.|..-...+.+.+.++ .+.+.++.+|..
T Consensus        84 --~~~~adivvitag~~~~~~----~~R~---dll~~N~~i~~~i~~~i~~~-~p~~ivivvtNP  138 (159)
T d2ldxa1          84 --VSANSKLVIITAGARMVSG----QTRL---DLLQRNVAIMKAIVPGVIQN-SPDCKIIVVTNP  138 (159)
T ss_dssp             --GGTTEEEEEECCSCCCCTT----TCSS---CTTHHHHHHHHHHTTTHHHH-STTCEEEECSSS
T ss_pred             --hhccccEEEEecccccCCC----CCHH---HHHHHHHHHHHHHHHHHhcc-CCCeEEEEeCCc
Confidence              1236899999999754222    1111   12444444333333333322 255677777653

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.15  E-value=0.0055  Score=43.14  Aligned_cols=111  Identities=14%  Similarity=0.072  Sum_probs=69.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc---CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL---GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      ++.|.|+ |.+|.+++..++..+.  +++++|++++.++....++...   ..+......|   .++           +.
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~---~~~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGD---YAD-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECC---GGG-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCc---HHH-----------hc
Confidence            4678886 8999999999988874  5999999998888766666552   2233333322   222           12


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .-|++|.++|....++    .+.   .+.+..|..=...+.+.+.++- +.+.++++|.
T Consensus        67 ~adivvitag~~~~~g----~~r---~dl~~~N~~I~~~i~~~i~~~~-p~aivivvtN  117 (140)
T d1a5za1          67 GSDVVIVAAGVPQKPG----ETR---LQLLGRNARVMKEIARNVSKYA-PDSIVIVVTN  117 (140)
T ss_dssp             TCSEEEECCCCCCCSS----CCH---HHHHHHHHHHHHHHHHHHHHHC-TTCEEEECSS
T ss_pred             CCCEEEEecccccCCC----cch---hhhhccccchHHHHHHHHHhcC-CCcEEEEeCC
Confidence            6899999999754222    233   3345666544444444444432 5566666664

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=97.12  E-value=0.0044  Score=43.75  Aligned_cols=113  Identities=15%  Similarity=0.157  Sum_probs=67.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      |++.|.|+ |.+|.+++..|+.++. +++++|.+++..+....++...    +....+..+  .|.+.           .
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYAD-----------T   67 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGGG-----------G
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEec--CcHHH-----------h
Confidence            57888886 9999999999998875 6999999998877766666432    212222211  11111           1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ..-|++|.+||....++       ..-.+.+..|..-.-.+.+.+.++ .+.+.++.+|.
T Consensus        68 ~~advvvitag~~~~~~-------~~r~dl~~~N~~i~~~i~~~i~k~-~p~aivivvtN  119 (142)
T d1uxja1          68 ANSDVIVVTSGAPRKPG-------MSREDLIKVNADITRACISQAAPL-SPNAVIIMVNN  119 (142)
T ss_dssp             TTCSEEEECCSCC----------------CHHHHHHHHHHHHHHHGGG-CTTCEEEECSS
T ss_pred             cCCCEEEEeeeccCCcC-------cchhHHHhHHHHHHHHHHHHHhcc-CCCceEEEeCC
Confidence            26899999999743211       223444667765444555555443 24566666654

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=97.09  E-value=0.0013  Score=46.97  Aligned_cols=83  Identities=12%  Similarity=0.048  Sum_probs=56.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      +.+-|+|.|.||.|-+|..+++.|.++|++|.+.+|+.....+..    ..+.+..+...+   ..++...+.++.....
T Consensus         6 ~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~----~~~~~~v~~~~~---~~~~~~v~~~~~~~~~   78 (152)
T d2pv7a2           6 NSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI----LANADVVIVSVP---INLTLETIERLKPYLT   78 (152)
T ss_dssp             CTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH----HTTCSEEEECSC---GGGHHHHHHHHGGGCC
T ss_pred             CCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh----hhhccccccccc---hhhheeeeeccccccc
Confidence            455679999999999999999999999999999999876544322    223444444433   4455556666655433


Q ss_pred             CCcEEEECCC
Q 025259           89 RIDVFVLNAA   98 (255)
Q Consensus        89 ~~d~lv~~ag   98 (255)
                      +=.+++..+.
T Consensus        79 ~~~iiiD~~S   88 (152)
T d2pv7a2          79 ENMLLADLTS   88 (152)
T ss_dssp             TTSEEEECCS
T ss_pred             CCceEEEecc
Confidence            3345665554

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00063  Score=50.97  Aligned_cols=45  Identities=20%  Similarity=0.319  Sum_probs=40.0

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA   58 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~   58 (255)
                      |+|.|.|+ |-+|..+|..|+..|+.|++++++++.+++..+.+++
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~   49 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEE   49 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHH
Confidence            68999998 7799999999999999999999999988877776653

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=97.06  E-value=0.00055  Score=50.37  Aligned_cols=80  Identities=19%  Similarity=0.196  Sum_probs=54.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+|+|.|+ +|+|...+..++..|+ .|+++++++++.+..    .+.+....+...+-  ++.+....+..  ..+.
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a----~~~Ga~~~i~~~~~--~~~~~~~~~~~--~~~G   98 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKA----KEVGATECVNPQDY--KKPIQEVLTEM--SNGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEEECGGGC--SSCHHHHHHHH--TTSC
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHH----HHhCCeeEEecCCc--hhHHHHHHHHH--hcCC
Confidence            5889999999 6899999999999986 689999999886544    23354433322222  22233333332  2247


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2jhfa2          99 VDFSFEVIGR  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEecCCc
Confidence            9999999995

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.02  E-value=0.0051  Score=43.85  Aligned_cols=119  Identities=14%  Similarity=0.036  Sum_probs=74.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .++.|.|+ |.+|.+++..++..+. +++++|++++..+....++++.    +.+..+...+  +.+           .+
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~--~~~-----------~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSN--TYD-----------DL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEEC--CGG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecc--ccc-----------cc
Confidence            46788895 9999999988888775 4999999998887776666542    2333333322  111           12


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..-|++|.++|....++..  ....+-.+.+..|..-...+.+.+.++- +.+.++++|..
T Consensus        70 ~~advvvitag~~~~~g~~--~~~~~R~~l~~~N~~iv~~i~~~i~~~~-p~aivivvtNP  127 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKS--DKEWNRDDLLPLNNKIMIEIGGHIKKNC-PNAFIIVVTNP  127 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCC--STTCCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEECSSS
T ss_pred             CCCcEEEEecccccCCCCC--ccccchhHHHHHHHHHHHHHHHHHHhcC-CCeEEEEecCc
Confidence            3699999999975433211  1111223446777766666666666552 45667777654

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.94  E-value=0.0022  Score=45.85  Aligned_cols=76  Identities=13%  Similarity=0.028  Sum_probs=58.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      .++|.|. +-+|+.+++.|.+.|..|++++.+++...+..++....  .+.++.+|.++++.++++--      .+.|.+
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~--~~~vi~Gd~~d~~~L~~a~i------~~a~~v   75 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGI------DRCRAI   75 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTT------TTCSEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcC--CcEEEEccCcchHHHHHhcc------ccCCEE
Confidence            5777777 69999999999999999999999987766655555443  46678899999887665422      267888


Q ss_pred             EECCC
Q 025259           94 VLNAA   98 (255)
Q Consensus        94 v~~ag   98 (255)
                      |...+
T Consensus        76 i~~~~   80 (153)
T d1id1a_          76 LALSD   80 (153)
T ss_dssp             EECSS
T ss_pred             EEccc
Confidence            87754

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.93  E-value=0.0034  Score=45.31  Aligned_cols=81  Identities=21%  Similarity=0.150  Sum_probs=55.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH---------HH-cCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL---------KA-LGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~---------~~-~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++.|.|. |-+|.++++.|.+.|++|++++|+++..++..+.-         +. ...++.++..   .+++++++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3667755 99999999999999999999999988776654321         00 1234444332   367788888888


Q ss_pred             HHHcCCCcEEEECCC
Q 025259           84 VEKYGRIDVFVLNAA   98 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag   98 (255)
                      .+.+.+=.++++.++
T Consensus        78 ~~~l~~~~iv~~~~s   92 (165)
T d2f1ka2          78 IPHLSPTAIVTDVAS   92 (165)
T ss_dssp             GGGSCTTCEEEECCS
T ss_pred             hhhcccccceeeccc
Confidence            766554456666554

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.92  E-value=0.0019  Score=46.69  Aligned_cols=99  Identities=21%  Similarity=0.294  Sum_probs=64.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.+++|.|+ |++|...+..+...|++|+++++++++++..    ++.|.+...   |-.+++..+    .+.+.....
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~----k~~Ga~~~~---~~~~~~~~~----~~~~~~~~~   94 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA----KELGADLVV---NPLKEDAAK----FMKEKVGGV   94 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH----HHTTCSEEE---CTTTSCHHH----HHHHHHSSE
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh----hhcCcceec---ccccchhhh----hcccccCCC
Confidence            5889999865 9999998888888899999999999876543    445655433   333333222    222222456


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +.+|.+++..           +               ..+...+.++++|+++.++-
T Consensus        95 ~~~v~~~~~~-----------~---------------~~~~a~~~l~~~G~i~~~g~  125 (168)
T d1rjwa2          95 HAAVVTAVSK-----------P---------------AFQSAYNSIRRGGACVLVGL  125 (168)
T ss_dssp             EEEEESSCCH-----------H---------------HHHHHHHHEEEEEEEEECCC
T ss_pred             ceEEeecCCH-----------H---------------HHHHHHHHhccCCceEeccc
Confidence            6666666531           1               13455666778888888864

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.89  E-value=0.0046  Score=44.26  Aligned_cols=117  Identities=15%  Similarity=0.151  Sum_probs=66.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC-------eEEEEeCCh--hHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA-------SVVISSRKQ--KNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      -+|.|+||+|.+|.+++..|+..+.       .+++.+.++  +.++....++.... .....+..--.+.+        
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--------   75 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEI--------   75 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHH--------
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCccccc--------
Confidence            4799999999999999999986542       356666654  33444444444431 22222222111111        


Q ss_pred             HHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           83 TVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                         .+...|++|..+|....++    .+.+   +.++.|..=.-.+.+...++-.+...++.+|.
T Consensus        76 ---~~~~~dvVVitag~~~~~g----~sr~---dll~~N~~i~k~~~~~i~k~a~~~~~iivvsN  130 (154)
T d5mdha1          76 ---AFKDLDVAILVGSMPRRDG----MERK---DLLKANVKIFKCQGAALDKYAKKSVKVIVVGN  130 (154)
T ss_dssp             ---HTTTCSEEEECCSCCCCTT----CCTT---TTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred             ---ccCCceEEEEecccCCCCC----Cchh---HHHHHhHHHHHHHHHHHHhhCCCceEEEEecC
Confidence               1237999999999754222    2222   23666665555555555554334445555553

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=96.87  E-value=0.00083  Score=52.02  Aligned_cols=106  Identities=14%  Similarity=0.124  Sum_probs=78.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.+++||=.|++.|.   ++..|++.|.+|+++|.+++.++.+.+.+...+.++.++.+|+.+.+           ..+
T Consensus        35 ~~~~~~vLDiGCG~G~---~~~~l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~-----------~~~  100 (246)
T d1y8ca_          35 NLVFDDYLDLACGTGN---LTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN-----------INR  100 (246)
T ss_dssp             TCCTTEEEEETCTTST---THHHHGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC-----------CSC
T ss_pred             CCCCCeEEEEeCcCCH---HHHHHHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc-----------ccc
Confidence            3567899999988885   77888999999999999999999888888887778888988886532           113


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      ++|++++..+...     .-.+.++..           .+++.+..+|+++|.+|+
T Consensus       101 ~fD~i~~~~~~~~-----~~~~~~~~~-----------~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         101 KFDLITCCLDSTN-----YIIDSDDLK-----------KYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             CEEEEEECTTGGG-----GCCSHHHHH-----------HHHHHHHTTEEEEEEEEE
T ss_pred             cccccceeeeeee-----ccCCHHHHH-----------HHHHHHHHhCCCCeEEEE
Confidence            7899887654322     112344433           346778888888888765

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=96.84  E-value=0.0038  Score=45.71  Aligned_cols=85  Identities=18%  Similarity=0.114  Sum_probs=60.7

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH---------------HHHcCCeEEEEEecCCCHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK---------------LKALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      .|-|.|- |-+|.+++++|+++|++|++.+|++++.+++.++               +.+.-.....+...+.+.+.+..
T Consensus         4 nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            4556665 8899999999999999999999999988876543               11111122334445677788888


Q ss_pred             HHHHHHHHcCCCcEEEECCCC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ..+.+.....+=+++|.+...
T Consensus        83 v~~~l~~~~~~g~iiid~sT~  103 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGGNS  103 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECSCC
T ss_pred             HHHHHHhccccCcEEEecCcc
Confidence            888887766555777777654

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.83  E-value=0.0023  Score=46.71  Aligned_cols=99  Identities=12%  Similarity=0.159  Sum_probs=64.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+++|.|+ |++|...+..+...|+. |+.+++++++++...    +.+....+   |.. ++.++...+...  ...
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~----~~ga~~~i---~~~-~~~~~~~~~~~~--~~g  100 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE----RLGADHVV---DAR-RDPVKQVMELTR--GRG  100 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH----HTTCSEEE---ETT-SCHHHHHHHHTT--TCC
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh----hcccceee---cCc-ccHHHHHHHhhC--CCC
Confidence            4789999885 99999999888888875 777888887655433    44544322   332 233333332211  125


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      +|++|.++|...                          ..+..+..++++|+++.++
T Consensus       101 ~d~vid~~g~~~--------------------------~~~~a~~~l~~~G~iv~~G  131 (172)
T d1h2ba2         101 VNVAMDFVGSQA--------------------------TVDYTPYLLGRMGRLIIVG  131 (172)
T ss_dssp             EEEEEESSCCHH--------------------------HHHHGGGGEEEEEEEEECC
T ss_pred             ceEEEEecCcch--------------------------HHHHHHHHHhCCCEEEEEe
Confidence            999999999521                          1244566778889999886

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.82  E-value=0.009  Score=42.09  Aligned_cols=112  Identities=8%  Similarity=-0.046  Sum_probs=72.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++.|.|+ |.+|.+++..++.+|.  +++++|++++..+....++++.    +.......+  .|.++           +
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~--~d~~~-----------~   67 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADYSL-----------L   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccC--CCHHH-----------h
Confidence            5678886 9999999999998874  4999999998887766666542    222222222  12221           1


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      ..-|++|..+|....++    .+   ..+.+..|..=...+.+.+.++- +.+.++.+|.
T Consensus        68 ~~adiVvitag~~~~~g----~~---r~~l~~~n~~i~~~i~~~i~~~~-p~aivivvtN  119 (142)
T d1ojua1          68 KGSEIIVVTAGLARKPG----MT---RLDLAHKNAGIIKDIAKKIVENA-PESKILVVTN  119 (142)
T ss_dssp             TTCSEEEECCCCCCCSS----CC---HHHHHHHHHHHHHHHHHHHHTTS-TTCEEEECSS
T ss_pred             ccccEEEEeccccCCCC----Cc---hHHHHHHhhHHHHHHHHHHHhhC-CCcEEEEecC
Confidence            26899999999643222    22   34456667766666666666653 4566666664

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.82  E-value=0.0037  Score=45.70  Aligned_cols=80  Identities=19%  Similarity=0.193  Sum_probs=54.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHH-HHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQ-HRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~-~~~~~~~~~~~~~   87 (255)
                      -.|.+|+|.|+ |++|...+..+...|+ .|+.+++++++++...    +.|.+..+   |.++.+ .+.+.....  ..
T Consensus        26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~----~lGa~~~i---~~~~~d~~~~~~~~~~--~~   95 (174)
T d1p0fa2          26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI----ELGATECL---NPKDYDKPIYEVICEK--TN   95 (174)
T ss_dssp             CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH----HTTCSEEE---CGGGCSSCHHHHHHHH--TT
T ss_pred             CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH----HcCCcEEE---cCCCchhHHHHHHHHh--cC
Confidence            35889999985 8999999999999997 5889999998875543    44654443   222211 122222221  22


Q ss_pred             CCCcEEEECCCC
Q 025259           88 GRIDVFVLNAAV   99 (255)
Q Consensus        88 g~~d~lv~~ag~   99 (255)
                      +.+|++|.+.|.
T Consensus        96 ~G~d~vid~~g~  107 (174)
T d1p0fa2          96 GGVDYAVECAGR  107 (174)
T ss_dssp             SCBSEEEECSCC
T ss_pred             CCCcEEEEcCCC
Confidence            479999999884

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.80  E-value=0.0012  Score=48.08  Aligned_cols=45  Identities=18%  Similarity=0.183  Sum_probs=39.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~   56 (255)
                      ++|+|+|.|+ ||.+++++..|.+.|+ +|.++.|+.++.+.+.+.+
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~   61 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALY   61 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHH
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhh
Confidence            6889999987 8999999999999997 5999999998887776654

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.78  E-value=0.0031  Score=46.57  Aligned_cols=92  Identities=20%  Similarity=0.121  Sum_probs=62.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++||++.|.|.+. ||+.+++.+...|++|+.++|.....          ..         .-.+++++++       .
T Consensus        39 ~l~gk~vgIiG~G~-IG~~va~~l~~~g~~v~~~d~~~~~~----------~~---------~~~~~l~ell-------~   91 (181)
T d1qp8a1          39 LIQGEKVAVLGLGE-IGTRVGKILAALGAQVRGFSRTPKEG----------PW---------RFTNSLEEAL-------R   91 (181)
T ss_dssp             CCTTCEEEEESCST-HHHHHHHHHHHTTCEEEEECSSCCCS----------SS---------CCBSCSHHHH-------T
T ss_pred             cccCceEEEecccc-ccccceeeeecccccccccccccccc----------ce---------eeeechhhhh-------h
Confidence            58999999999765 99999999999999999999876321          00         1111233333       3


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..|+++.+.........+  .                   .+..+..|+++..+|+++-.
T Consensus        92 ~sDiv~~~~pl~~~t~~l--i-------------------~~~~l~~mk~~ailIN~~RG  130 (181)
T d1qp8a1          92 EARAAVCALPLNKHTRGL--V-------------------KYQHLALMAEDAVFVNVGRA  130 (181)
T ss_dssp             TCSEEEECCCCSTTTTTC--B-------------------CHHHHTTSCTTCEEEECSCG
T ss_pred             ccchhhcccccccccccc--c-------------------ccceeeeccccceEEecccc
Confidence            699999988765322211  1                   23556777887888888743

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=96.76  E-value=0.06  Score=42.99  Aligned_cols=157  Identities=18%  Similarity=0.170  Sum_probs=94.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+|++||=.++..| |.++  +++..+.+|+.++.+++.++...+.++..+. ++.++.+|..+      +.+......
T Consensus       143 ~~~g~rVLDl~~gtG-~~s~--~~a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~------~~~~~~~~~  213 (318)
T d1wxxa2         143 RFRGERALDVFSYAG-GFAL--HLALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFD------LLRRLEKEG  213 (318)
T ss_dssp             GCCEEEEEEETCTTT-HHHH--HHHHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHH------HHHHHHHTT
T ss_pred             HhCCCeeeccCCCCc-HHHH--HHHhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHH------HhhhhHhhh
Confidence            457889987775554 2333  3455677899999999999999888887763 57788877643      223333334


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHH
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTAL  167 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~  167 (255)
                      .++|.+|.+.......+    ...       .........+.+.+..+++++|.+++.+....           .+..-+
T Consensus       214 ~~fD~Vi~DpP~~~~~~----~~~-------~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs~~-----------~~~~~f  271 (318)
T d1wxxa2         214 ERFDLVVLDPPAFAKGK----KDV-------ERAYRAYKEVNLRAIKLLKEGGILATASCSHH-----------MTEPLF  271 (318)
T ss_dssp             CCEEEEEECCCCSCCST----TSH-------HHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT-----------SCHHHH
T ss_pred             cCCCEEEEcCCccccch----HHH-------HHHHHHHHHHHHHHHHHcCCCCEEEEEeCCcc-----------cCHHHH
Confidence            57999999987654111    111       11222344577888888899898887654321           122233


Q ss_pred             HHHHHHHHHHhCCCcEEEEEeCCcccChh
Q 025259          168 LGLTKALAAEMAPDTRVNCVAPGFVPTHF  196 (255)
Q Consensus       168 ~~l~~~la~e~~~~i~v~~v~pg~v~t~~  196 (255)
                      ..++...+.+.+..+++.....-+.|-|.
T Consensus       272 ~~~v~~a~~~a~~~~~~~~~~~~~~DhP~  300 (318)
T d1wxxa2         272 YAMVAEAAQDAHRLLRVVEKRGQPFDHPV  300 (318)
T ss_dssp             HHHHHHHHHHTTCCEEEEEEECCCTTSCC
T ss_pred             HHHHHHHHHHcCCCEEEEEecCCCCCCCC
Confidence            44444444454445665544333344443

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=96.75  E-value=0.001  Score=49.52  Aligned_cols=83  Identities=13%  Similarity=0.231  Sum_probs=55.7

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH-----Hc
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE-----KY   87 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-----~~   87 (255)
                      |+|.|.|+ |-+|..+|..|+..|+.|++++++++.+++..+.+...-.+.  +.-....++..+...+.+.-     .+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~~~l~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~   81 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKLLVGR--VDKGRMTPAKMAEVLNGIRPTLSYGDF   81 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHHHHHHHH--HTTTSSCHHHHHHHHHHEEEESSSTTG
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhhhhHHhh--hcccccchhhhhhhhceeecccccccc
Confidence            56889998 789999999999999999999999998887766664320000  01123345666665555431     12


Q ss_pred             CCCcEEEECCC
Q 025259           88 GRIDVFVLNAA   98 (255)
Q Consensus        88 g~~d~lv~~ag   98 (255)
                      ...|.+|-++.
T Consensus        82 ~~adlViEav~   92 (186)
T d1wdka3          82 GNVDLVVEAVV   92 (186)
T ss_dssp             GGCSEEEECCC
T ss_pred             cccceeeeeec
Confidence            34677777555

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.75  E-value=0.0018  Score=47.53  Aligned_cols=102  Identities=19%  Similarity=0.178  Sum_probs=66.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHHHc
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVEKY   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~~   87 (255)
                      -.|.+|+|.| .|++|...+..+...|+. |+++++++++++..    ++.|....+   |.. .++......+..  ..
T Consensus        27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a----~~~Ga~~~i---~~~~~~~~~~~~~~~~--~~   96 (174)
T d1e3ia2          27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA----KALGATDCL---NPRELDKPVQDVITEL--TA   96 (174)
T ss_dssp             CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCSEEE---CGGGCSSCHHHHHHHH--HT
T ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH----HHhCCCccc---CCccchhhhhhhHhhh--hc
Confidence            3588999997 599999999999999985 88889998876433    344544432   221 122233333322  22


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccC-CCeEEEEcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQK-GSSVVFISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~-~~~iv~vss  147 (255)
                      +.+|++|.++|..           +               ..+.....+++ .|+++.++-
T Consensus        97 ~G~d~vie~~G~~-----------~---------------~~~~a~~~~~~g~G~~v~vG~  131 (174)
T d1e3ia2          97 GGVDYSLDCAGTA-----------Q---------------TLKAAVDCTVLGWGSCTVVGA  131 (174)
T ss_dssp             SCBSEEEESSCCH-----------H---------------HHHHHHHTBCTTTCEEEECCC
T ss_pred             CCCcEEEEecccc-----------h---------------HHHHHHHHhhcCCeEEEecCC
Confidence            5799999999942           1               13344555666 489998874

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.73  E-value=0.0017  Score=47.51  Aligned_cols=80  Identities=19%  Similarity=0.177  Sum_probs=51.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+++|.|+ +|+|...+..+...|+. |+.+++++++.+..    ++.|.+..+..-+  +.+.+.+.++..  ..+.
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a----k~lGa~~~i~~~~--~~~~~~~~~~~~--~~~g   98 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARA----KEFGATECINPQD--FSKPIQEVLIEM--TDGG   98 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH----HHHTCSEEECGGG--CSSCHHHHHHHH--TTSC
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHH----HHhCCcEEEeCCc--hhhHHHHHHHHH--cCCC
Confidence            4889999998 58999999888889975 77778877775433    2335444322111  122233333332  2247


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|++|.+.|.
T Consensus        99 ~D~vid~~G~  108 (176)
T d2fzwa2          99 VDYSFECIGN  108 (176)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEeeecCCC
Confidence            9999999984

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.73  E-value=0.0014  Score=48.25  Aligned_cols=51  Identities=18%  Similarity=0.294  Sum_probs=43.2

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL   59 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~   59 (255)
                      ..++++|+++|.|+ ||.+++++..|.+.| +|.++.|+.++.+.+.+.+...
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~   63 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEK   63 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHh
Confidence            34689999999976 578999999997766 8999999999999888887653

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.69  E-value=0.0007  Score=48.47  Aligned_cols=44  Identities=16%  Similarity=0.296  Sum_probs=36.5

Q ss_pred             CccccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259            1 MEKVNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus         1 ~~~~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      |+.--+..+|+||++||.|| |.+|..-++.|++.|++|.+++..
T Consensus         2 ~~~lpl~~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           2 VKSLQLAHQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             CCCEEEEECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             cccchhheeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            34444556899999999999 559999999999999999888653

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=96.65  E-value=0.0074  Score=43.60  Aligned_cols=106  Identities=18%  Similarity=0.113  Sum_probs=76.5

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+.-+++|.|+ |-.|.+-++...+.|+.|.++|.+.+.++++.......   +   .+-..+++.+++.+.       .
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~---~---~~~~~~~~~l~~~~~-------~   95 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSR---V---ELLYSNSAEIETAVA-------E   95 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGG---S---EEEECCHHHHHHHHH-------T
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhccc---c---eeehhhhhhHHHhhc-------c
Confidence            35678899986 56799999999999999999999999988776655332   2   233467777665555       6


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      .|++|.++-+.....                    +..+.+..+..|+++..||-++.-.
T Consensus        96 aDivI~aalipG~~a--------------------P~lIt~~mv~~Mk~GSVIVDvaidq  135 (168)
T d1pjca1          96 ADLLIGAVLVPGRRA--------------------PILVPASLVEQMRTGSVIVDVAVDQ  135 (168)
T ss_dssp             CSEEEECCCCTTSSC--------------------CCCBCHHHHTTSCTTCEEEETTCTT
T ss_pred             CcEEEEeeecCCccc--------------------CeeecHHHHhhcCCCcEEEEeecCC
Confidence            899999998654222                    2233566678888888888887544

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=96.61  E-value=0.0014  Score=48.96  Aligned_cols=110  Identities=18%  Similarity=0.215  Sum_probs=73.8

Q ss_pred             EeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc--CCCcEEE
Q 025259           17 VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY--GRIDVFV   94 (255)
Q Consensus        17 VtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--g~~d~lv   94 (255)
                      +|-|+||...++.+.+ . +..|+++|++++.++...+.++..+.++.++..++++...       +.+.+  .++|.++
T Consensus        30 ~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~-------~~~~~~~~~vdgIl  100 (192)
T d1m6ya2          30 CTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADF-------LLKTLGIEKVDGIL  100 (192)
T ss_dssp             TTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHH-------HHHHTTCSCEEEEE
T ss_pred             ecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHH-------HHHHcCCCCcceee
Confidence            4667777777777776 3 4689999999999999999888888899999999987433       33332  5799999


Q ss_pred             ECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           95 LNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        95 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      ...|+.+ .. + +..    ++-+..    .-.........++++|+++.++
T Consensus       101 ~DlGvSs-~Q-l-d~~----~r~~~~----~~~~L~~a~~~Lk~gG~l~ii~  141 (192)
T d1m6ya2         101 MDLGVST-YQ-L-KGE----NRELEN----LKEFLKKAEDLLNPGGRIVVIS  141 (192)
T ss_dssp             EECSCCH-HH-H-HTS----HTHHHH----HHHHHHHGGGGEEEEEEEEEEE
T ss_pred             eccchhH-hh-h-hhh----hccchh----HHHHHHHHHHhcCCCCeeeeec
Confidence            9999753 11 1 111    111111    1122344445567788887765

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.56  E-value=0.0072  Score=43.90  Aligned_cols=80  Identities=18%  Similarity=0.189  Sum_probs=51.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+++|.|+ +++|...+..++..|+. |+.+++++++++..    ++.|.+..+..-+-.+  ..++..+..  ..+.
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a----~~~GAd~~in~~~~~~--~~~~~~~~~--~~~G   98 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA----KVFGATDFVNPNDHSE--PISQVLSKM--TNGG   98 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH----HHTTCCEEECGGGCSS--CHHHHHHHH--HTSC
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHH----HHcCCcEEEcCCCcch--hHHHHHHhh--ccCC
Confidence            5889999985 77888888888888775 88899999887553    3456544332222211  122222221  1247


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|+++.+.|.
T Consensus        99 ~d~vid~~G~  108 (175)
T d1cdoa2          99 VDFSLECVGN  108 (175)
T ss_dssp             BSEEEECSCC
T ss_pred             cceeeeecCC
Confidence            9999999995

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.50  E-value=0.0031  Score=47.34  Aligned_cols=43  Identities=16%  Similarity=0.292  Sum_probs=38.3

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDK   51 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~   51 (255)
                      .+|+||+++|-| .|.+|..+++.|.+.|++|++++.+.+.+..
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~   65 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH   65 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence            469999999997 7779999999999999999999998876654

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=96.45  E-value=0.0063  Score=43.75  Aligned_cols=84  Identities=19%  Similarity=0.199  Sum_probs=54.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------HHcCCeEEEEEecCCCHHHHHHHH---HHHH
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-------KALGIEVIGIICHVSNEQHRKNLI---DKTV   84 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~---~~~~   84 (255)
                      |-|. |.|-+|.++|++|++.|++|++.+|+++..++..+.-       ++.-.+..++..-+.++++++..+   +.+.
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~~   81 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII   81 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCHH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcchh
Confidence            4555 4589999999999999999999999998877654421       000001223445567788888776   3344


Q ss_pred             HHcCCCcEEEECCCC
Q 025259           85 EKYGRIDVFVLNAAV   99 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~   99 (255)
                      ....+=+++|.+...
T Consensus        82 ~~~~~g~iiid~sT~   96 (161)
T d1vpda2          82 EGAKPGTVLIDMSSI   96 (161)
T ss_dssp             HHCCTTCEEEECSCC
T ss_pred             hccCCCCEEEECCCC
Confidence            444444567766554

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=96.41  E-value=0.023  Score=40.80  Aligned_cols=83  Identities=12%  Similarity=0.069  Sum_probs=56.3

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCChhHHHHHHHHHH------------HcCCeEEEEEecCCCHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQKNVDKAVEKLK------------ALGIEVIGIICHVSNEQHRKN   78 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~~~~~   78 (255)
                      |+++|.| .|-+|..+++.|.+.|+  +|++++++++.++...+.-.            ....++.++.   .-++++..
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila---~p~~~~~~   77 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS---SPVRTFRE   77 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEEC---SCHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhcchhhhhhhhhhhcccccccccc---CCchhhhh
Confidence            4688887 49999999999999996  58889999888776554310            0012333322   23677888


Q ss_pred             HHHHHHHHcCCCcEEEECCCC
Q 025259           79 LIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        79 ~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .++++.+...+=.+++..++.
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            888887776544566665554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.27  E-value=0.046  Score=43.77  Aligned_cols=117  Identities=17%  Similarity=0.199  Sum_probs=77.8

Q ss_pred             CCCEEEEeCCCC-chHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQ-GIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~~-giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|++||=.++.. +++.    .++..|+ .|+.++.+++.++...+.++..+  .++.++..|+.+      ....+...
T Consensus       145 ~g~~VLDl~~g~G~~si----~~a~~ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~------~~~~~~~~  214 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAI----HAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFE------EMEKLQKK  214 (324)
T ss_dssp             TTCEEEETTCTTTHHHH----HHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH------HHHHHHHT
T ss_pred             CCCeeecccCcccchhh----hhhhcCCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhh------hhHHHHhc
Confidence            388888887654 4443    3446676 59999999999999888887775  367777777632      22333334


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ..++|.+|.+..... ..      ..+.    .........+.+.+.+.++++|.+++.+..
T Consensus       215 ~~~fD~Vi~DpP~~~-~~------~~~~----~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s  265 (324)
T d2as0a2         215 GEKFDIVVLDPPAFV-QH------EKDL----KAGLRAYFNVNFAGLNLVKDGGILVTCSCS  265 (324)
T ss_dssp             TCCEEEEEECCCCSC-SS------GGGH----HHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred             cCCCCchhcCCcccc-CC------HHHH----HHHHHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence            457999999987653 11      1111    222334556788888999998988877643

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=96.27  E-value=0.0087  Score=46.16  Aligned_cols=83  Identities=13%  Similarity=0.213  Sum_probs=55.6

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC-------------------hhHHHHHHHHHHHcCCeEEEEE
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK-------------------QKNVDKAVEKLKALGIEVIGII   67 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~-------------------~~~~~~~~~~~~~~~~~~~~~~   67 (255)
                      ++|++++|+|.| .||+|..++..|++.|.. +.++|.+                   ..+.+.+.+.+++.+..+.+..
T Consensus        26 ~kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~np~~~i~~  104 (247)
T d1jw9b_          26 EALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITP  104 (247)
T ss_dssp             HHHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHhhcccchhh
Confidence            468899999999 678999999999999985 8888763                   2345666777777654444333


Q ss_pred             ecCC-CHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           68 CHVS-NEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        68 ~D~~-~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+.. +.+.......       ..|++|.+..
T Consensus       105 ~~~~~~~~~~~~~~~-------~~divid~~d  129 (247)
T d1jw9b_         105 VNALLDDAELAALIA-------EHDLVLDCTD  129 (247)
T ss_dssp             ECSCCCHHHHHHHHH-------TSSEEEECCS
T ss_pred             hhhhhhhcccccccc-------ccceeeeccc
Confidence            3332 2333333222       6788887654

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=96.20  E-value=0.018  Score=44.68  Aligned_cols=98  Identities=13%  Similarity=0.109  Sum_probs=69.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ..|++||=.|+++|+-   +..+++.|++|+++|.++..++.+.+..+..+.+..++..|+.+      .+     ..++
T Consensus       119 ~~g~~VLDiGcGsG~l---~i~aa~~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~------~~-----~~~~  184 (254)
T d2nxca1         119 RPGDKVLDLGTGSGVL---AIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEA------AL-----PFGP  184 (254)
T ss_dssp             CTTCEEEEETCTTSHH---HHHHHHTTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHH------HG-----GGCC
T ss_pred             CccCEEEEcccchhHH---HHHHHhcCCEEEEEECChHHHHHHHHHHHHcCCceeEEeccccc------cc-----cccc
Confidence            5689999999998863   34567789999999999999999988888877777777766421      11     1257


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      +|.++.|...            +.+           ..+.+.+...++++|+++.
T Consensus       185 fD~V~ani~~------------~~l-----------~~l~~~~~~~LkpGG~lil  216 (254)
T d2nxca1         185 FDLLVANLYA------------ELH-----------AALAPRYREALVPGGRALL  216 (254)
T ss_dssp             EEEEEEECCH------------HHH-----------HHHHHHHHHHEEEEEEEEE
T ss_pred             cchhhhcccc------------ccH-----------HHHHHHHHHhcCCCcEEEE
Confidence            9999877321            111           1234556667788888775

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.18  E-value=0.04  Score=40.23  Aligned_cols=99  Identities=18%  Similarity=0.213  Sum_probs=70.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+.+||=.|+++|   .++..+++.+.+|+.++.+++.++...+.+++.+  .++.++.+|..          +......
T Consensus        33 ~g~~VLDiGcGsG---~~s~~lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~gda~----------~~~~~~~   99 (186)
T d1l3ia_          33 KNDVAVDVGCGTG---GVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP----------EALCKIP   99 (186)
T ss_dssp             TTCEEEEESCTTS---HHHHHHHTTSSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH----------HHHTTSC
T ss_pred             CCCEEEEEECCeE---cccccccccceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEECchh----------hcccccC
Confidence            4778888887776   3345566777899999999999999999888876  57888888742          1112335


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .+|.++.+.+...            +           ..+.+.+..+++++|+++..
T Consensus       100 ~~D~v~~~~~~~~------------~-----------~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         100 DIDIAVVGGSGGE------------L-----------QEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             CEEEEEESCCTTC------------H-----------HHHHHHHHHTEEEEEEEEEE
T ss_pred             CcCEEEEeCcccc------------c-----------hHHHHHHHHHhCcCCEEEEE
Confidence            7899987754321            1           12466777888888887653

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.13  E-value=0.0079  Score=44.37  Aligned_cols=97  Identities=27%  Similarity=0.292  Sum_probs=63.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..+.+|++.|.| .|.||+++++.+...|++|+..++........     ..+.+       ..   ++++++.      
T Consensus        40 ~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~-----~~~~~-------~~---~l~ell~------   97 (184)
T d1ygya1          40 TEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA-----QLGIE-------LL---SLDDLLA------   97 (184)
T ss_dssp             CCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH-----HHTCE-------EC---CHHHHHH------
T ss_pred             ccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHh-----hcCce-------ec---cHHHHHh------
Confidence            358899999988 68999999999999999999999876543221     11111       11   2334444      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ..|+|+.+.........                     .+-+..+..|+++..+|++|-.
T Consensus        98 -~sDiv~~~~Plt~~T~~---------------------lin~~~l~~mk~~a~lIN~sRG  136 (184)
T d1ygya1          98 -RADFISVHLPKTPETAG---------------------LIDKEALAKTKPGVIIVNAARG  136 (184)
T ss_dssp             -HCSEEEECCCCSTTTTT---------------------CBCHHHHTTSCTTEEEEECSCT
T ss_pred             -hCCEEEEcCCCCchhhh---------------------hhhHHHHhhhCCCceEEEecch
Confidence             48988888776532221                     2233455677777777877643

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=96.12  E-value=0.23  Score=39.43  Aligned_cols=116  Identities=9%  Similarity=0.075  Sum_probs=73.9

Q ss_pred             CCCEEEEeCCCCc-hHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQG-IGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~g-iG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      +|++||=..+..| ++.    +.+..|+ .|+.++.++..++-..+.++..+   .++.++..|..      ..++...+
T Consensus       144 ~g~~VLdlf~~~G~~sl----~aa~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~~  213 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSV----AAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF------DYFKYARR  213 (317)
T ss_dssp             BTCEEEEETCTTTHHHH----HHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHHH
T ss_pred             CCCceeecCCCCcHHHH----HHHhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH------HHHHHHHh
Confidence            5888887665544 443    3456787 49999999999988888876654   36788888773      22344444


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      +..++|++|.....+...+. .-...          ......+.+.++++++++|.+++.|.
T Consensus       214 ~~~~fD~Ii~DPP~f~~~~~-~~~~~----------~~~~~~L~~~a~~ll~pgG~l~~~sc  264 (317)
T d2b78a2         214 HHLTYDIIIIDPPSFARNKK-EVFSV----------SKDYHKLIRQGLEILSENGLIIASTN  264 (317)
T ss_dssp             TTCCEEEEEECCCCC------CCCCH----------HHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             hcCCCCEEEEcChhhccchh-HHHHH----------HHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence            54579999999775431111 11111          12334567888888888887776553

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.01  E-value=0.0071  Score=44.99  Aligned_cols=99  Identities=20%  Similarity=0.223  Sum_probs=63.6

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ...|+||++.|.| -|.||+++++.+...|++|+..++.......  .   ..+         +...++++.++.     
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~---~~~---------~~~~~~l~~ll~-----  103 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--R---ALG---------LQRVSTLQDLLF-----  103 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--H---HHT---------CEECSSHHHHHH-----
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCcccccch--h---hhc---------cccccchhhccc-----
Confidence            3468999999995 5789999999999999999999987543111  1   111         111223344444     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                        ..|+++.+.........+                     +-+..+..|+++..+|++|-.
T Consensus       104 --~sD~i~~~~plt~~T~~l---------------------i~~~~l~~mk~~a~lIN~sRG  142 (193)
T d1mx3a1         104 --HSDCVTLHCGLNEHNHHL---------------------INDFTVKQMRQGAFLVNTARG  142 (193)
T ss_dssp             --HCSEEEECCCCCTTCTTS---------------------BSHHHHTTSCTTEEEEECSCT
T ss_pred             --cCCEEEEeecccccchhh---------------------hhHHHHhccCCCCeEEecCCc
Confidence              478888877754322211                     234456677777777777643

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=95.99  E-value=0.037  Score=40.18  Aligned_cols=46  Identities=15%  Similarity=0.119  Sum_probs=39.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA   58 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~   58 (255)
                      ..|++||..|++.|   ..+..|+++|++|+++|.++..++...+..++
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~   64 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAVERYFTERGE   64 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHHHHHHHHHCS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHHHHHHHHhcc
Confidence            46889999999887   46779999999999999999999888777643

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.93  E-value=0.0071  Score=45.14  Aligned_cols=40  Identities=18%  Similarity=0.143  Sum_probs=35.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN   48 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~   48 (255)
                      ..|+||++.|.|- |.||+.+++.+...|++|+..++....
T Consensus        39 ~el~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~   78 (197)
T d1j4aa1          39 REVRDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNP   78 (197)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH
T ss_pred             ccccCCeEEEecc-cccchhHHHhHhhhcccccccCccccc
Confidence            4689999999984 789999999999999999999887643

>d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PH1109
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=95.79  E-value=0.03  Score=39.07  Aligned_cols=85  Identities=15%  Similarity=0.123  Sum_probs=57.2

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHHcCCeEEEEeCChhHHH--HHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHH
Q 025259           11 QGKVAVVTAST---QGIGLGVAERLGLEGASVVISSRKQKNVD--KAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        11 ~~k~vlVtG~~---~giG~~~a~~l~~~G~~Vv~~~r~~~~~~--~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      +.|++.|.|+|   +..|..+.+.|.+.|++|+.+....+...  .+...+.+..  .++..+   +..++.+..+++++
T Consensus        18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i~G~~~~~sl~dlp~~iD~v~i---~vp~~~~~~~~~e~   94 (139)
T d2d59a1          18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEVLGRKCYPSVLDIPDKIEVVDL---FVKPKLTMEYVEQA   94 (139)
T ss_dssp             HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGCSSCCSEEEE---CSCHHHHHHHHHHH
T ss_pred             cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccccCCCcccccccccCccceEEEE---EeCHHHHHHHHHHH
Confidence            58999999999   57999999999999999998876543321  1122222222  222221   24577788888887


Q ss_pred             HHHcCCCcEEEECCCCC
Q 025259           84 VEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~  100 (255)
                      .+.  ++..++...|..
T Consensus        95 ~~~--g~k~v~~~~G~~  109 (139)
T d2d59a1          95 IKK--GAKVVWFQYNTY  109 (139)
T ss_dssp             HHH--TCSEEEECTTCC
T ss_pred             HHh--CCCEEEEecccc
Confidence            765  467777777753

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.77  E-value=0.011  Score=42.73  Aligned_cols=42  Identities=26%  Similarity=0.294  Sum_probs=37.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNV   49 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~   49 (255)
                      -+++||+++|.|-+.-+|+.++..|.++|++|..+.+....+
T Consensus        33 i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          33 IDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             cccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            368999999999999999999999999999999887765443

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.73  E-value=0.028  Score=41.84  Aligned_cols=78  Identities=23%  Similarity=0.294  Sum_probs=60.1

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..+++|++||=.|+++|.   ++..++..|+ .|++++.+++.++.+.+.++..+.+..++.+|+...            
T Consensus        42 ~~dl~g~~vLDlg~GtG~---l~i~a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~------------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGV---LSYGALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCH---HHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------------
T ss_pred             cCCCCCCEEEECcCcchH---HHHHHHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh------------
Confidence            346899999999977663   2334456776 699999999999888888877788888888886431            


Q ss_pred             HcCCCcEEEECCCCC
Q 025259           86 KYGRIDVFVLNAAVN  100 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~  100 (255)
                       .+++|++|.|..+.
T Consensus       107 -~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 -NSRVDIVIMNPPFG  120 (201)
T ss_dssp             -CCCCSEEEECCCCS
T ss_pred             -CCcCcEEEEcCccc
Confidence             25799999998764

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.72  E-value=0.011  Score=43.66  Aligned_cols=41  Identities=22%  Similarity=0.199  Sum_probs=35.3

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN   48 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~   48 (255)
                      ..+++++++.|.| .|.||+++++.+...|.+|+..++....
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~   79 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLP   79 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecccc
Confidence            4468899999998 5789999999999999999999987543

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0044  Score=51.98  Aligned_cols=36  Identities=17%  Similarity=0.286  Sum_probs=31.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRK   45 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~   45 (255)
                      .|++.+|||.|+ ||+|.++++.|+..|.. +.++|.+
T Consensus        34 ~l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D   70 (426)
T d1yovb1          34 LLDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMD   70 (426)
T ss_dssp             HHHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCC
T ss_pred             HHhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECC
Confidence            367889999998 67999999999999985 8888774

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.67  E-value=0.045  Score=39.06  Aligned_cols=85  Identities=14%  Similarity=0.047  Sum_probs=54.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH-------HHcCCeEEEEEecCCCHHHHHHHHHH---H
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL-------KALGIEVIGIICHVSNEQHRKNLIDK---T   83 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~---~   83 (255)
                      +|-+. |.|-+|.++|++|+++|+.|.+.+|+++..+.+.+.-       .+......++..-+.+...++.++..   +
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~~   81 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDGL   81 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTCH
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhccccc
Confidence            45566 5689999999999999999999999988766554321       11111222344556677777766543   3


Q ss_pred             HHHcCCCcEEEECCCC
Q 025259           84 VEKYGRIDVFVLNAAV   99 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~   99 (255)
                      .....+=+++|.+...
T Consensus        82 ~~~l~~g~iiid~st~   97 (162)
T d3cuma2          82 LAHIAPGTLVLECSTI   97 (162)
T ss_dssp             HHHSCTTCEEEECSCC
T ss_pred             cccCCCCCEEEECCCC
Confidence            3333333567766654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.61  E-value=0.0066  Score=43.48  Aligned_cols=34  Identities=18%  Similarity=0.018  Sum_probs=31.2

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKN   48 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~   48 (255)
                      +|+|.|+ |.+|..++..|++.|++|.+++|+++.
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~   35 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP   35 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence            5889988 999999999999999999999998754

>d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Thermotoga maritima [TaxId: 2336]

Probab=95.56  E-value=0.04  Score=43.03  Aligned_cols=78  Identities=19%  Similarity=0.187  Sum_probs=55.7

Q ss_pred             CCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           12 GKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        12 ~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .++++-.|+++|+ +.+++ +  ...+.|++++.+++.++-+.+-++..+  .++.+...|+.+.         ....++
T Consensus       111 ~~~vld~g~GsG~i~~~la-~--~~~~~v~a~Dis~~Al~~A~~Na~~~~~~~~~~i~~~~~~~~---------~~~~~~  178 (271)
T d1nv8a_         111 IKTVADIGTGSGAIGVSVA-K--FSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---------FKEKFA  178 (271)
T ss_dssp             CCEEEEESCTTSHHHHHHH-H--HSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---------GGGGTT
T ss_pred             ccEEEEeeeeeehhhhhhh-h--cccceeeechhhhhHHHHHHHHHHHcCCCceeEEeecccccc---------cccccC
Confidence            4566766666664 44433 2  356789999999999988888887765  4677888888643         223346


Q ss_pred             CCcEEEECCCCCC
Q 025259           89 RIDVFVLNAAVNP  101 (255)
Q Consensus        89 ~~d~lv~~ag~~~  101 (255)
                      ++|++|.|..+.+
T Consensus       179 ~fDlIVsNPPYI~  191 (271)
T d1nv8a_         179 SIEMILSNPPYVK  191 (271)
T ss_dssp             TCCEEEECCCCBC
T ss_pred             cccEEEEcccccC
Confidence            8999999999764

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.53  E-value=0.011  Score=42.98  Aligned_cols=43  Identities=23%  Similarity=0.302  Sum_probs=38.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHH
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVD   50 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~   50 (255)
                      -+++||+++|.|-+.-+|+.++..|+++|+.|..+......+.
T Consensus        35 i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~   77 (170)
T d1a4ia1          35 VPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD   77 (170)
T ss_dssp             CCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH
T ss_pred             cccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHH
Confidence            3689999999999999999999999999999999888665543

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.058  Score=35.99  Aligned_cols=74  Identities=9%  Similarity=0.084  Sum_probs=55.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ....++.|.| +|-+|+-++....+.|.+|++.+.+++....        ...-.++..|..|.+.+.++..+.     .
T Consensus         9 ~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~--------~va~~~i~~~~~d~~~l~~~~~~~-----~   74 (111)
T d1kjqa2           9 PAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAM--------HVAHRSHVINMLDGDALRRVVELE-----K   74 (111)
T ss_dssp             TTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGG--------GGSSEEEECCTTCHHHHHHHHHHH-----C
T ss_pred             CCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchh--------hcCCeEEECCCCCHHHHHHHHHhh-----C
Confidence            4566899999 6789999999999999999999988653211        111245778999999998887754     6


Q ss_pred             CcEEEECC
Q 025259           90 IDVFVLNA   97 (255)
Q Consensus        90 ~d~lv~~a   97 (255)
                      +|++.+--
T Consensus        75 ~DviT~E~   82 (111)
T d1kjqa2          75 PHYIVPEI   82 (111)
T ss_dssp             CSEEEECS
T ss_pred             CceEEEEe
Confidence            89886543

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=95.52  E-value=0.044  Score=39.62  Aligned_cols=79  Identities=11%  Similarity=0.112  Sum_probs=51.8

Q ss_pred             CCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc------------------CCeEEEEEecCCCHHHHHHHHH
Q 025259           20 STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL------------------GIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus        20 ~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      |.|-.|.+++++|+++|++|.+.+|++++.+++.++-...                  -.+...+..-+.....+...+.
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTIE   87 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhhh
Confidence            6788999999999999999999999999888776543110                  0111222333445555666666


Q ss_pred             HHHHHcCCCcEEEECCC
Q 025259           82 KTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag   98 (255)
                      .+...+.+=++++...-
T Consensus        88 ~~~~~~~~~~iii~~st  104 (178)
T d1pgja2          88 QLKKVFEKGDILVDTGN  104 (178)
T ss_dssp             HHHHHCCTTCEEEECCC
T ss_pred             hhhhhccccceecccCc
Confidence            66555544456666554

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.48  E-value=0.02  Score=42.41  Aligned_cols=99  Identities=14%  Similarity=0.147  Sum_probs=62.9

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++||++.|.|. |.||+++++.+...|.+|+..++.....+.....    .         ....++++.++.      
T Consensus        43 ~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~~----~---------~~~~~~l~~ll~------  102 (191)
T d1gdha1          43 EKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEASY----Q---------ATFHDSLDSLLS------  102 (191)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHHH----T---------CEECSSHHHHHH------
T ss_pred             ceecccceEEeec-ccchHHHHHHHHhhccccccccccccccchhhcc----c---------ccccCCHHHHHh------
Confidence            4678999999975 6899999999999999999999875533221111    1         011123444444      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       ..|+++.+.........+                     +.+..+..|+++..+|+++=.
T Consensus       103 -~sD~v~l~~plt~~T~~l---------------------i~~~~l~~mk~~a~lIN~sRG  141 (191)
T d1gdha1         103 -VSQFFSLNAPSTPETRYF---------------------FNKATIKSLPQGAIVVNTARG  141 (191)
T ss_dssp             -HCSEEEECCCCCTTTTTC---------------------BSHHHHTTSCTTEEEEECSCG
T ss_pred             -hCCeEEecCCCCchHhhe---------------------ecHHHhhCcCCccEEEecCCc
Confidence             479888877765312111                     223445677777777777643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=95.25  E-value=0.012  Score=40.53  Aligned_cols=71  Identities=11%  Similarity=0.085  Sum_probs=50.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      |.++|.|. +.+|+.+++.|.  |..|++++.+++..+..    ...+  +.++.+|.++++.++++      ...+.+.
T Consensus         1 kHivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~----~~~~--~~~i~Gd~~~~~~L~~a------~i~~A~~   65 (129)
T d2fy8a1           1 RHVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKV----LRSG--ANFVHGDPTRVSDLEKA------NVRGARA   65 (129)
T ss_dssp             CCEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHH----HHTT--CEEEESCTTSHHHHHHT------TCTTCSE
T ss_pred             CEEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHH----HhcC--ccccccccCCHHHHHHh------hhhcCcE
Confidence            56788875 778999999994  56788889888776543    3333  56678999998876653      1236777


Q ss_pred             EEECCC
Q 025259           93 FVLNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      +|.+..
T Consensus        66 vi~~~~   71 (129)
T d2fy8a1          66 VIVNLE   71 (129)
T ss_dssp             EEECCS
T ss_pred             EEEecc
Confidence            776543

>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Putative methyltransferase Atu0340
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=95.22  E-value=0.24  Score=39.14  Aligned_cols=118  Identities=11%  Similarity=0.032  Sum_probs=72.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++||=..+.+|.   ++.+++..|+.|+.++.+...++...+.++..+   .++.++..|+.      +.+++.....
T Consensus       132 ~~~rVLdlf~~tG~---~sl~aa~~GA~V~~VD~s~~al~~a~~N~~ln~~~~~~~~~i~~D~~------~~l~~~~~~~  202 (309)
T d2igta1         132 RPLKVLNLFGYTGV---ASLVAAAAGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAM------KFIQREERRG  202 (309)
T ss_dssp             SCCEEEEETCTTCH---HHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHH------HHHHHHHHHT
T ss_pred             CCCeEEEecCCCcH---HHHHHHhCCCeEEEEeChHHHHHHHHHhhhhhcccCCcEEEEeCCHH------HhHHHHhhcC
Confidence            57888876655542   333456789999999999999988877665443   35778877763      2344444444


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcC
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISS  147 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss  147 (255)
                      .++|+||.+...+...+.-..   ..+.+.+       -.+.+.+..++.+++.++++++
T Consensus       203 ~~fD~IilDPP~f~~~~~~~~---~~~~~~~-------~~l~~~~~~ll~~~g~~ll~t~  252 (309)
T d2igta1         203 STYDIILTDPPKFGRGTHGEV---WQLFDHL-------PLMLDICREILSPKALGLVLTA  252 (309)
T ss_dssp             CCBSEEEECCCSEEECTTCCE---EEHHHHH-------HHHHHHHHHTBCTTCCEEEEEE
T ss_pred             CCCCEEEECCCcccccccchh---HHHHHHH-------HHHHHHHHHhcCCCCCEEEEec
Confidence            579999998765431111111   1122222       1355667777777776665554

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.17  E-value=0.067  Score=40.30  Aligned_cols=44  Identities=11%  Similarity=0.017  Sum_probs=37.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      ..+++||..|++.|   ..+..|++.|++|+++|.+++.++.+.++.
T Consensus        44 ~~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai~~a~~~~   87 (229)
T d2bzga1          44 KSGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGIQEFFTEQ   87 (229)
T ss_dssp             CCSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHHHHHHHHh
Confidence            36789999999887   458888999999999999999888776654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=95.17  E-value=0.067  Score=35.78  Aligned_cols=35  Identities=23%  Similarity=0.201  Sum_probs=30.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            578888875 78999999999999999999988764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=95.16  E-value=0.029  Score=38.55  Aligned_cols=73  Identities=11%  Similarity=0.115  Sum_probs=55.0

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEE-EEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++.|.|++|-.|+++++.+.+.|+.++ .++++....      +  ...+   +..|+|.++.....++...+.  +..+
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~~~------~--~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~   68 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGVEE------L--DSPD---VVIDFSSPEALPKTVDLCKKY--RAGL   68 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEEEE------C--SCCS---EEEECSCGGGHHHHHHHHHHH--TCEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcHHH------h--ccCC---EEEEecCHHHHHHHHHHHHhc--CCCE
Confidence            589999999999999999989999865 455543210      0  1223   457999999999999988876  5667


Q ss_pred             EEECCCC
Q 025259           93 FVLNAAV   99 (255)
Q Consensus        93 lv~~ag~   99 (255)
                      ++-.-|.
T Consensus        69 ViGTTG~   75 (128)
T d1vm6a3          69 VLGTTAL   75 (128)
T ss_dssp             EECCCSC
T ss_pred             EEEcCCC
Confidence            7777774

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.13  E-value=0.034  Score=42.31  Aligned_cols=103  Identities=16%  Similarity=0.070  Sum_probs=74.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.++||=.|++.|   ..+..|+++|++|++++.+++-++.+.+.+++.+.++.++.+|+.+-+     +      -+.+
T Consensus        41 ~~~~iLDiGcGtG---~~~~~l~~~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l~-----~------~~~f  106 (251)
T d1wzna1          41 EVRRVLDLACGTG---IPTLELAERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIA-----F------KNEF  106 (251)
T ss_dssp             CCCEEEEETCTTC---HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCC-----C------CSCE
T ss_pred             CCCEEEEeCCCCC---ccchhhcccceEEEEEeeccccccccccccccccccchheehhhhhcc-----c------cccc
Confidence            4678999998886   456678899999999999999999988888888878899999886522     0      1368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      |.+++..+...      -.+.++..           .+++.+...|+++|.++.
T Consensus       107 D~I~~~~~~~~------~~~~~~~~-----------~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         107 DAVTMFFSTIM------YFDEEDLR-----------KLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             EEEEECSSGGG------GSCHHHHH-----------HHHHHHHHHEEEEEEEEE
T ss_pred             chHhhhhhhhh------cCChHHHH-----------HHHHHHHHHcCCCcEEEE
Confidence            98887644322      11233332           345666777888887665

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.00  E-value=0.067  Score=40.40  Aligned_cols=80  Identities=18%  Similarity=0.083  Sum_probs=61.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC------CeEEEEEecCCCHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG------IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .|.+||-.|.++|--.++..++......|+.++++++-++...+.++..+      .++.+...|..+..          
T Consensus        76 ~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~~----------  145 (224)
T d1i1na_          76 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGY----------  145 (224)
T ss_dssp             TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCC----------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeeccccc----------
Confidence            47799999999999888888888877899999999999888888776532      35677777764211          


Q ss_pred             HHcCCCcEEEECCCCC
Q 025259           85 EKYGRIDVFVLNAAVN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                      ...+++|.++.+++..
T Consensus       146 ~~~~~fD~I~~~~~~~  161 (224)
T d1i1na_         146 AEEAPYDAIHVGAAAP  161 (224)
T ss_dssp             GGGCCEEEEEECSBBS
T ss_pred             chhhhhhhhhhhcchh
Confidence            1124789999988764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=94.92  E-value=0.056  Score=38.08  Aligned_cols=36  Identities=33%  Similarity=0.348  Sum_probs=29.5

Q ss_pred             CCEEEEe-CCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVT-ASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVt-G~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      ++.++|. .+++.||.++|..|++.|++|.++.+.+.
T Consensus        39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4455554 57799999999999999999999988754

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=94.92  E-value=0.026  Score=39.89  Aligned_cols=41  Identities=15%  Similarity=0.187  Sum_probs=33.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEK   55 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~   55 (255)
                      ++.+.|+ |.+|.++++.|++.| .+|++++|+++..+++.++
T Consensus         2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~   43 (152)
T d1yqga2           2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKE   43 (152)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHH
T ss_pred             EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhh
Confidence            3566665 999999999999887 7899999999887766553

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.88  E-value=0.021  Score=41.44  Aligned_cols=38  Identities=26%  Similarity=0.350  Sum_probs=35.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +++||.++|.|-|.-+|+-++..|+++|+.|..+..+.
T Consensus        26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~   63 (171)
T d1edza1          26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNN   63 (171)
T ss_dssp             TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSE
T ss_pred             CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccc
Confidence            79999999999999999999999999999999887653

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=94.82  E-value=0.099  Score=36.11  Aligned_cols=76  Identities=8%  Similarity=0.058  Sum_probs=54.3

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEE-EEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-GASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ++.|.|++|-.|+++++...+. ++.++ .+++.+.. .    .+...+.+   +..|+|.++.+...++...+.  +..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~-~----~~~~~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~   70 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPL-S----LLTDGNTE---VVIDFTHPDVVMGNLEFLIDN--GIH   70 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCT-H----HHHTTTCS---EEEECCCTTTHHHHHHHHHHT--TCE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCch-h----hhccccCC---EEEEcccHHHHHHHHHHHHhc--CCC
Confidence            5899999999999999998764 66754 55664332 1    22223334   457999999999999988765  566


Q ss_pred             EEEECCCC
Q 025259           92 VFVLNAAV   99 (255)
Q Consensus        92 ~lv~~ag~   99 (255)
                      +++-.-|.
T Consensus        71 ~ViGTTG~   78 (135)
T d1yl7a1          71 AVVGTTGF   78 (135)
T ss_dssp             EEECCCCC
T ss_pred             EEEecccc
Confidence            77766664

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=94.74  E-value=0.26  Score=35.19  Aligned_cols=78  Identities=8%  Similarity=0.052  Sum_probs=45.2

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH-c----CCeEEEEeCChhHHHHHHHHHHHc----CCeEEEEEecCCCHHHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGL-E----GASVVISSRKQKNVDKAVEKLKAL----GIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~-~----G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ..++.|.||++.....++..++. .    +.+++++|.++++++.....++..    +........  +|..   ..+  
T Consensus         3 ~~KI~iIGaGsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~---eal--   75 (167)
T d1u8xx1           3 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAAT--TDPE---EAF--   75 (167)
T ss_dssp             CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEE--SCHH---HHH--
T ss_pred             CceEEEECCChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEec--CChh---hcc--
Confidence            44678888866433334444443 2    236999999999887655555432    322222221  2221   112  


Q ss_pred             HHHHcCCCcEEEECCCCCC
Q 025259           83 TVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~  101 (255)
                           ..-|++|+.+|...
T Consensus        76 -----~~AD~Vvitag~~~   89 (167)
T d1u8xx1          76 -----TDVDFVMAHIRVGK   89 (167)
T ss_dssp             -----SSCSEEEECCCTTH
T ss_pred             -----CCCCEEEECCCcCC
Confidence                 27999999999753

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=94.70  E-value=0.2  Score=33.34  Aligned_cols=82  Identities=16%  Similarity=0.191  Sum_probs=58.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      ||+|||.--...+-..+...|.+.|+.|+....+.   ++..+.+++...++.++-.++-+.+.+ .+++++++..+.+.
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~---~~al~~~~~~~~dliilD~~mp~~~G~-e~~~~ir~~~~~~p   76 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNG---REAVEKYKELKPDIVTMDITMPEMNGI-DAIKEIMKIDPNAK   76 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSH---HHHHHHHHHHCCSEEEEECSCGGGCHH-HHHHHHHHHCTTCC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCH---HHHHHHHHhccCCEEEEecCCCCCCHH-HHHHHHHHhCCCCc
Confidence            78999999999999999999999999988665544   233344445556676665555555554 45677777777777


Q ss_pred             EEEECC
Q 025259           92 VFVLNA   97 (255)
Q Consensus        92 ~lv~~a   97 (255)
                      +++..+
T Consensus        77 vi~ls~   82 (118)
T d1u0sy_          77 IIVCSA   82 (118)
T ss_dssp             EEEEEC
T ss_pred             EEEEEc
Confidence            776653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=94.67  E-value=0.079  Score=35.55  Aligned_cols=34  Identities=18%  Similarity=0.115  Sum_probs=29.7

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence            578887775 7899999999999999999999865

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.66  E-value=0.09  Score=35.50  Aligned_cols=35  Identities=17%  Similarity=0.182  Sum_probs=30.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|+++|.|| |.||.++|..|++.|.+|.++.+.+.
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~   57 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQ   57 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEeccc
Confidence            578888875 68999999999999999999988653

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.65  E-value=0.17  Score=36.96  Aligned_cols=103  Identities=10%  Similarity=0.138  Sum_probs=71.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC---CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG---IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++||=.|+++|   .++..+++.+.+|++++.++...+.+.+.++..+   .++.++.+|+.+.-      .     
T Consensus        51 ~~~~~VLDiGcG~G---~~~~~la~~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~------~-----  116 (194)
T d1dusa_          51 DKDDDILDLGCGYG---VIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV------K-----  116 (194)
T ss_dssp             CTTCEEEEETCTTS---HHHHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC------T-----
T ss_pred             CCCCeEEEEeecCC---hhHHHHHhhccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh------c-----
Confidence            46889999998777   3445667788899999999998888877776543   46888999986421      1     


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      -..+|.++.|.....        ..+..           ..+++.+..+|+++|.++.+
T Consensus       117 ~~~fD~Ii~~~p~~~--------~~~~~-----------~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         117 DRKYNKIITNPPIRA--------GKEVL-----------HRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             TSCEEEEEECCCSTT--------CHHHH-----------HHHHHHHHHHEEEEEEEEEE
T ss_pred             cCCceEEEEcccEEe--------cchhh-----------hhHHHHHHHhcCcCcEEEEE
Confidence            137999998866422        12211           12466677778888877654

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=94.63  E-value=0.044  Score=41.61  Aligned_cols=48  Identities=21%  Similarity=0.385  Sum_probs=41.0

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHH
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEK   55 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~   55 (255)
                      ..+|+|++++|-| .|.+|..+++.|.+.|+.|+.++.+...++....+
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~   81 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAE   81 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHh
Confidence            3469999999987 57899999999999999999999998877665554

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=94.58  E-value=0.13  Score=37.27  Aligned_cols=113  Identities=18%  Similarity=0.222  Sum_probs=70.8

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC---------------HH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN---------------EQ   74 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~---------------~~   74 (255)
                      ...-+++|.|| |-.|.+-++-....|+.|.++|.+.+.++++.+    .+.++.  ..+..+               ++
T Consensus        27 V~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~----l~~~~i--~~~~~~~~~~~~~~gyA~~~s~~   99 (183)
T d1l7da1          27 VPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVES----LGGKFI--TVDDEAMKTAETAGGYAKEMGEE   99 (183)
T ss_dssp             ECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH----TTCEEC--CC---------------------
T ss_pred             cCCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH----hhcceE--EEeccccccccccccchhhcCHH
Confidence            45568888886 567889888889999999999999988766543    333222  111111               11


Q ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcC
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIA  149 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~  149 (255)
                      ..+..-+.+.+.....|++|..+-+.....|.                    .+.+.....|++++.||-++...
T Consensus       100 ~~~~~~~~l~~~l~~aDlVI~talipG~~aP~--------------------lit~~mv~~Mk~GSVIVDvaidq  154 (183)
T d1l7da1         100 FRKKQAEAVLKELVKTDIAITTALIPGKPAPV--------------------LITEEMVTKMKPGSVIIDLAVEA  154 (183)
T ss_dssp             --CCHHHHHHHHHTTCSEEEECCCCTTSCCCC--------------------CSCHHHHTTSCTTCEEEETTGGG
T ss_pred             HHHHHHHHHHHHHHhhhhheeeeecCCcccce--------------------eehHHHHHhcCCCcEEEEEeecC
Confidence            12222334444456899999999765423222                    23556677888878888877543

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.58  E-value=0.027  Score=41.45  Aligned_cols=95  Identities=22%  Similarity=0.175  Sum_probs=61.8

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++++++.|. |.|.||+.+++.+...|++|+..++......         . ..  .  ..   ++++++++      
T Consensus        40 ~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~~~~~---------~-~~--~--~~---~~l~ell~------   95 (188)
T d1sc6a1          40 FEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIENKLPL---------G-NA--T--QV---QHLSDLLN------   95 (188)
T ss_dssp             CCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSCCCCC---------T-TC--E--EC---SCHHHHHH------
T ss_pred             ccccceEEEEe-ecccchhhhhhhcccccceEeeccccccchh---------h-hh--h--hh---hhHHHHHh------
Confidence            46899999999 5689999999999999999999998653210         0 01  1  11   23444444      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                       .-|+++.++......  ..                   .+.+.++..|+++..+|+++-.
T Consensus        96 -~sDii~i~~plt~~T--~~-------------------li~~~~l~~mk~~a~lIN~aRG  134 (188)
T d1sc6a1          96 -MSDVVSLHVPENPST--KN-------------------MMGAKEISLMKPGSLLINASRG  134 (188)
T ss_dssp             -HCSEEEECCCSSTTT--TT-------------------CBCHHHHHHSCTTEEEEECSCS
T ss_pred             -hccceeecccCCcch--hh-------------------hccHHHHhhCCCCCEEEEcCcH
Confidence             479988888765311  11                   1233455667776677777644

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=94.53  E-value=0.079  Score=35.85  Aligned_cols=37  Identities=22%  Similarity=0.205  Sum_probs=31.5

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +.++|+++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        27 ~~~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          27 DPEVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             CTTCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             ccCCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence            34578888885 57999999999999999999998865

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.51  E-value=0.075  Score=36.04  Aligned_cols=34  Identities=18%  Similarity=0.185  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .|+++|.||+ .||.++|..|++.|.+|.++.|.+
T Consensus        22 pk~vvIvGgG-~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAG-YIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCC-ccHHHHHHHHhcCCcEEEEEeecc
Confidence            5788898875 699999999999999999999864

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=94.44  E-value=0.091  Score=39.40  Aligned_cols=78  Identities=18%  Similarity=0.161  Sum_probs=62.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      ++.+||..|+++|--.++..++.  |..|+.+.++++-.+...+.+++.+ .++.++.+|..+-          ....++
T Consensus        78 ~g~~VLeIGsGsGY~taila~l~--g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g----------~~~~~p  145 (215)
T d1jg1a_          78 PGMNILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKG----------FPPKAP  145 (215)
T ss_dssp             TTCCEEEECCTTSHHHHHHHHHH--CSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----------CGGGCC
T ss_pred             ccceEEEecCCCChhHHHHHHhh--CceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccC----------CcccCc
Confidence            47799999999999999888876  4669999999988888888888876 6799999987631          112357


Q ss_pred             CcEEEECCCCC
Q 025259           90 IDVFVLNAAVN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      +|.++.+++..
T Consensus       146 fD~Iiv~~a~~  156 (215)
T d1jg1a_         146 YDVIIVTAGAP  156 (215)
T ss_dssp             EEEEEECSBBS
T ss_pred             ceeEEeecccc
Confidence            89999888864

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=94.40  E-value=0.12  Score=34.81  Aligned_cols=35  Identities=17%  Similarity=0.253  Sum_probs=30.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      +|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeeccc
Confidence            678777764 79999999999999999999988764

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=94.28  E-value=0.1  Score=34.80  Aligned_cols=35  Identities=14%  Similarity=0.076  Sum_probs=29.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            577777764 78999999999999999999998753

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=94.21  E-value=0.14  Score=34.22  Aligned_cols=35  Identities=20%  Similarity=0.112  Sum_probs=30.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      ..++++|.|| |.||.++|..|++.|..|.++.+.+
T Consensus        21 ~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~   55 (119)
T d3lada2          21 VPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD   55 (119)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             CCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence            4688888875 7899999999999999999988765

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=94.17  E-value=0.11  Score=38.39  Aligned_cols=104  Identities=13%  Similarity=0.063  Sum_probs=73.4

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      ++.+||=.|+++|.   ++..|++.|++|+++|.+++.++..++.....+.++..+..|..+...          ....+
T Consensus        37 ~~~~ILDiGcG~G~---~~~~la~~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~~l~~----------~~~~f  103 (226)
T d1ve3a1          37 KRGKVLDLACGVGG---FSFLLEDYGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSF----------EDKTF  103 (226)
T ss_dssp             SCCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCS----------CTTCE
T ss_pred             CCCEEEEECCCcch---hhhhHhhhhcccccccccccchhhhhhhhccccccccccccccccccc----------cCcCc
Confidence            35678999988876   667888899999999999999998888887777777788888765220          11368


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      |+++.......       .+.+++.+           +++.+...|+++|++++.
T Consensus       104 D~I~~~~~l~~-------~~~~d~~~-----------~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         104 DYVIFIDSIVH-------FEPLELNQ-----------VFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             EEEEEESCGGG-------CCHHHHHH-----------HHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEecchhh-------CChhHHHH-----------HHHHHHHHcCcCcEEEEE
Confidence            99887755321       23333332           356666777888876543

>d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein TT1466
species: Thermus thermophilus [TaxId: 274]

Probab=93.96  E-value=0.087  Score=36.42  Aligned_cols=96  Identities=16%  Similarity=0.128  Sum_probs=54.9

Q ss_pred             CccccccccC-CCCEEEEeCCCC---chHHHHHHHHHHcCCeEEEEeCChhH--H--HHHHHHHHHcCCeEEEEEecCCC
Q 025259            1 MEKVNMAKRF-QGKVAVVTASTQ---GIGLGVAERLGLEGASVVISSRKQKN--V--DKAVEKLKALGIEVIGIICHVSN   72 (255)
Q Consensus         1 ~~~~~~~~~l-~~k~vlVtG~~~---giG~~~a~~l~~~G~~Vv~~~r~~~~--~--~~~~~~~~~~~~~~~~~~~D~~~   72 (255)
                      |++..+..-| +.|++.|.|+|.   ..|..+.+.|.+.|+.++.+.-+...  .  ......+.+....+..+.. ...
T Consensus         1 M~d~~i~~~L~~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~~i~g~~~~~~l~~i~~~iD~v~v-~~p   79 (136)
T d1iuka_           1 MNDQELRAYLSQAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGEELFGEEAVASLLDLKEPVDILDV-FRP   79 (136)
T ss_dssp             CCHHHHHHHHHHCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTSEETTEECBSSGGGCCSCCSEEEE-CSC
T ss_pred             CCHHHHHHHHhCCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccceeeceecccchhhccCCCceEEE-ecc
Confidence            5554443334 689999999994   68999999999999998877554321  0  0111111121111111111 234


Q ss_pred             HHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           73 EQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        73 ~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ++.+..+++++.+.  ++..++...|.
T Consensus        80 ~~~v~~~v~~~~~~--g~k~i~~q~G~  104 (136)
T d1iuka_          80 PSALMDHLPEVLAL--RPGLVWLQSGI  104 (136)
T ss_dssp             HHHHTTTHHHHHHH--CCSCEEECTTC
T ss_pred             HHHHHHHHHHHHhh--CCCeEEEecCc
Confidence            66666666666655  34556666664

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.90  E-value=0.14  Score=34.56  Aligned_cols=33  Identities=21%  Similarity=0.170  Sum_probs=28.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      .++++|.|| |.||.++|..|.+.|.+|.++.|+
T Consensus        20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            567777775 789999999999999999998876

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.87  E-value=0.027  Score=41.47  Aligned_cols=40  Identities=23%  Similarity=0.178  Sum_probs=33.2

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAV   53 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~   53 (255)
                      ++|.|.|++ ..|.+++..|++.|++|.+.+|+++..+...
T Consensus         8 ~KI~ViGaG-~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~   47 (189)
T d1n1ea2           8 NKAVVFGSG-AFGTALAMVLSKKCREVCVWHMNEEEVRLVN   47 (189)
T ss_dssp             EEEEEECCS-HHHHHHHHHHHTTEEEEEEECSCHHHHHHHH
T ss_pred             ceEEEECCC-HHHHHHHHHHHHcCCeEEEEEecHHHHHHHh
Confidence            358888764 5999999999999999999999987765543

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.86  E-value=0.013  Score=46.18  Aligned_cols=112  Identities=15%  Similarity=0.018  Sum_probs=67.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCe-----EEEEEecCCCHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE-----VIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++||=.|++.|.   ++..|++.|++|+++|.+++.++.+.+.....+..     .....+|....+.      .+ .
T Consensus        56 ~~~~vLD~GcG~G~---~~~~la~~g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~  125 (292)
T d1xvaa_          56 GCHRVLDVACGTGV---DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK------DV-P  125 (292)
T ss_dssp             TCCEEEESSCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH------HS-C
T ss_pred             CCCEEEEecCCCcH---HHHHHHHcCCeeeeccCchHHHHHHHHHHHhcccccccceeeeeecccccccc------cc-C
Confidence            46799999988776   46667888999999999999988887776654322     2233344332110      00 0


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      .....|.+++........ +....+.++.           ..+++.+...|+++|.+|+
T Consensus       126 ~~~~fd~v~~~~~~~~~~-~~~~~~~~~~-----------~~~l~~~~~~LkpgG~li~  172 (292)
T d1xvaa_         126 AGDGFDAVICLGNSFAHL-PDSKGDQSEH-----------RLALKNIASMVRPGGLLVI  172 (292)
T ss_dssp             CTTCEEEEEECSSCGGGS-CCTTSSSHHH-----------HHHHHHHHHTEEEEEEEEE
T ss_pred             CCCCceEEEEecCchhhc-CCcccChHHH-----------HHHHHHHHHHcCcCcEEEE
Confidence            113578888755432211 1111122332           3356788888999898766

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=93.66  E-value=0.083  Score=40.36  Aligned_cols=107  Identities=11%  Similarity=0.101  Sum_probs=72.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ++++||=.|++.|-   ....+++.|. .|+++|.+++.++.+.+..++.+  .++.+..+|.....-         ...
T Consensus        24 ~~~~VLDlGCG~G~---~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~---------~~~   91 (252)
T d1ri5a_          24 RGDSVLDLGCGKGG---DLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHM---------DLG   91 (252)
T ss_dssp             TTCEEEEETCTTTT---THHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCC---------CCS
T ss_pred             CcCEEEEecccCcH---HHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcc---------ccc
Confidence            57899999987762   3456677775 69999999999999888777653  478899999753311         011


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      +.+|+++++.......     .+.++++           .+++.+...|+++|.+|..
T Consensus        92 ~~fD~V~~~~~l~~~~-----~~~~~~~-----------~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_          92 KEFDVISSQFSFHYAF-----STSESLD-----------IAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCEEEEEEESCGGGGG-----SSHHHHH-----------HHHHHHHHTEEEEEEEEEE
T ss_pred             ccceEEEEcceeeecC-----CCHHHHH-----------HHHHHHhceeCCCCEEEEE
Confidence            3689988876653211     2234333           3456677778888877654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=93.62  E-value=0.032  Score=41.37  Aligned_cols=75  Identities=20%  Similarity=0.237  Sum_probs=53.7

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHH
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..++.||+||=.|+++|+   ++..++..|+. |++++.+++.++...+.    -.++.++.+|+.+.           
T Consensus        43 ~~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N----~~~~~~~~~D~~~l-----------  104 (197)
T d1ne2a_          43 NDGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRN----CGGVNFMVADVSEI-----------  104 (197)
T ss_dssp             HHTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHH----CTTSEEEECCGGGC-----------
T ss_pred             HcCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHc----cccccEEEEehhhc-----------
Confidence            3457899999999988873   33446677765 99999998877655443    23567788887531           


Q ss_pred             HHcCCCcEEEECCCCC
Q 025259           85 EKYGRIDVFVLNAAVN  100 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~  100 (255)
                        -+++|++|.|..+.
T Consensus       105 --~~~fD~Vi~NPPfg  118 (197)
T d1ne2a_         105 --SGKYDTWIMNPPFG  118 (197)
T ss_dssp             --CCCEEEEEECCCC-
T ss_pred             --CCcceEEEeCcccc
Confidence              25899999997753

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=93.61  E-value=0.15  Score=38.01  Aligned_cols=80  Identities=20%  Similarity=0.194  Sum_probs=58.8

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+||-.|+++|--.++..++......|+.++.+++.++...+.++..+ .++.++..|..+..          ...++
T Consensus        75 ~g~~VLdiG~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~----------~~~~~  144 (213)
T d1dl5a1          75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV----------PEFSP  144 (213)
T ss_dssp             TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC----------GGGCC
T ss_pred             ccceEEEecCccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHcc----------ccccc
Confidence            47799999988887777666665566689999999999999988888765 45666776654311          11246


Q ss_pred             CcEEEECCCCC
Q 025259           90 IDVFVLNAAVN  100 (255)
Q Consensus        90 ~d~lv~~ag~~  100 (255)
                      +|.++.+++..
T Consensus       145 fD~I~~~~~~~  155 (213)
T d1dl5a1         145 YDVIFVTVGVD  155 (213)
T ss_dssp             EEEEEECSBBS
T ss_pred             hhhhhhhccHH
Confidence            89999888753

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=93.37  E-value=0.19  Score=37.74  Aligned_cols=75  Identities=16%  Similarity=0.031  Sum_probs=53.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      .|.+||-.|+++|--.++   |++.+.+|+.++++++..+...+.+.. ..++.++..|...-          ....+++
T Consensus        70 ~g~~VLdIG~GsGy~ta~---La~l~~~V~aiE~~~~~~~~A~~~~~~-~~nv~~~~~d~~~g----------~~~~~pf  135 (224)
T d1vbfa_          70 KGQKVLEIGTGIGYYTAL---IAEIVDKVVSVEINEKMYNYASKLLSY-YNNIKLILGDGTLG----------YEEEKPY  135 (224)
T ss_dssp             TTCEEEEECCTTSHHHHH---HHHHSSEEEEEESCHHHHHHHHHHHTT-CSSEEEEESCGGGC----------CGGGCCE
T ss_pred             ccceEEEecCCCCHHHHH---HHHHhcccccccccHHHHHHHHHHHhc-ccccccccCchhhc----------chhhhhH
Confidence            477999999998865544   555567899999999888777665543 35788888887531          0112578


Q ss_pred             cEEEECCCC
Q 025259           91 DVFVLNAAV   99 (255)
Q Consensus        91 d~lv~~ag~   99 (255)
                      |.++.+++.
T Consensus       136 D~Iiv~~a~  144 (224)
T d1vbfa_         136 DRVVVWATA  144 (224)
T ss_dssp             EEEEESSBB
T ss_pred             HHHHhhcch
Confidence            999988875

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.32  E-value=0.18  Score=39.69  Aligned_cols=76  Identities=16%  Similarity=0.153  Sum_probs=53.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .+++|+||-.|++.|+   ++..+++.|+ .|++++.++.. ....+.+.+.  ..++.++..|+.+...          
T Consensus        33 ~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~-~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          33 IFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEIL-YQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHH-HHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             cCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHH-HHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            4689999999999886   5667778897 59999988754 3344444443  4678899988876321          


Q ss_pred             HcCCCcEEEECCC
Q 025259           86 KYGRIDVFVLNAA   98 (255)
Q Consensus        86 ~~g~~d~lv~~ag   98 (255)
                      ...++|+++...-
T Consensus        99 ~~~~~D~Ivse~~  111 (311)
T d2fyta1          99 PVEKVDVIISEWM  111 (311)
T ss_dssp             SCSCEEEEEECCC
T ss_pred             ccccceEEEEeee
Confidence            1137899987543

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=93.30  E-value=0.46  Score=33.05  Aligned_cols=77  Identities=14%  Similarity=0.173  Sum_probs=55.1

Q ss_pred             cCCCCEEEEeCCCCc-hHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQG-IGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG~~~g-iG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +++|+++|=.|+++| +|.    ..+..|+ +|+.++.+++..+...+.++..+  .++.++..|...      ++   .
T Consensus        12 ~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l---~   78 (152)
T d2esra1          12 YFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AI---D   78 (152)
T ss_dssp             CCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HH---H
T ss_pred             hCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------cc---c
Confidence            578999988886655 444    4466776 59999999999888888887664  468888887432      12   2


Q ss_pred             HHcCCCcEEEECCC
Q 025259           85 EKYGRIDVFVLNAA   98 (255)
Q Consensus        85 ~~~g~~d~lv~~ag   98 (255)
                      ....+.|+++.+..
T Consensus        79 ~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 CLTGRFDLVFLDPP   92 (152)
T ss_dssp             HBCSCEEEEEECCS
T ss_pred             ccccccceeEechh
Confidence            23357899988754

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=93.29  E-value=0.071  Score=39.44  Aligned_cols=37  Identities=16%  Similarity=0.119  Sum_probs=31.5

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      |.|. |.|.+|..+|..|+++|++|+++|.+++..+..
T Consensus         3 I~Vi-GlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l   39 (202)
T d1mv8a2           3 ISIF-GLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI   39 (202)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEE-CCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh
Confidence            5566 789999999999999999999999998765443

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=93.27  E-value=0.27  Score=35.73  Aligned_cols=106  Identities=10%  Similarity=0.107  Sum_probs=73.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+++.+||=.|++.|.   .+..|++.|++|++++.+++.++.+.+..++.+. .+.+...|+.+..     .+      
T Consensus        28 ~~~~grvLDiGcG~G~---~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~~-----~~------   93 (198)
T d2i6ga1          28 VVAPGRTLDLGCGNGR---NSLYLAANGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTLT-----FD------   93 (198)
T ss_dssp             TSCSCEEEEETCTTSH---HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTCC-----CC------
T ss_pred             cCCCCcEEEECCCCCH---HHHHHHHHhhhhccccCcHHHHHHHHHHhhhccccchhhhheeccccc-----cc------
Confidence            3567789999986553   5568889999999999999999988877777653 4777778876532     11      


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      +.+|.++.+.-...       .+++++.           .+++.+...++++|.+++..
T Consensus        94 ~~fD~I~~~~~~~~-------~~~~~~~-----------~~l~~~~~~L~pgG~~~~~~  134 (198)
T d2i6ga1          94 GEYDFILSTVVMMF-------LEAQTIP-----------GLIANMQRCTKPGGYNLIVA  134 (198)
T ss_dssp             CCEEEEEEESCGGG-------SCTTHHH-----------HHHHHHHHTEEEEEEEEEEE
T ss_pred             ccccEEEEeeeeec-------CCHHHHH-----------HHHHHHHHHcCCCcEEEEEE
Confidence            36898887665432       1222222           24566667778888777654

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=93.25  E-value=0.25  Score=32.86  Aligned_cols=37  Identities=16%  Similarity=0.175  Sum_probs=31.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      ..+|+++|.|| |.+|..+|..|++.|..|.++.|.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            45788887765 78999999999999999999988653

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=93.04  E-value=0.19  Score=33.86  Aligned_cols=35  Identities=26%  Similarity=0.268  Sum_probs=30.6

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|+++|.|| |-||.++|..|++.|.+|.++.|.+.
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence            678888875 79999999999999999999988653

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.01  E-value=0.15  Score=39.64  Aligned_cols=103  Identities=13%  Similarity=0.097  Sum_probs=72.2

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGL---EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~---~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++++||=.|++.|.   ++..|++   .|+.|+++|.++..++...+.+...+.++.+...|+.+.+     +      
T Consensus        26 ~~~~~ILDiGcG~G~---~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~~-----~------   91 (281)
T d2gh1a1          26 TKPVHIVDYGCGYGY---LGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIE-----L------   91 (281)
T ss_dssp             CSCCEEEEETCTTTH---HHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTCC-----C------
T ss_pred             CCcCEEEEecCcCCH---HHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccccccccccccccc-----c------
Confidence            357789999977663   3334443   5788999999999999988888877778999999987532     1      


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      .+++|+++.+.......      +              +..+++.+...++++|.++.+.
T Consensus        92 ~~~fD~v~~~~~l~~~~------d--------------~~~~l~~~~~~LkpgG~lii~~  131 (281)
T d2gh1a1          92 NDKYDIAICHAFLLHMT------T--------------PETMLQKMIHSVKKGGKIICFE  131 (281)
T ss_dssp             SSCEEEEEEESCGGGCS------S--------------HHHHHHHHHHTEEEEEEEEEEE
T ss_pred             cCCceEEEEehhhhcCC------C--------------HHHHHHHHHHHcCcCcEEEEEE
Confidence            13689888876643211      1              1234577778888888877654

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.98  E-value=0.19  Score=37.30  Aligned_cols=103  Identities=14%  Similarity=0.186  Sum_probs=66.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      |.+||=.|+++|.-......+...| .|++++.+++.++.+.+..+.. .++.++..|..++......       +..+|
T Consensus        57 g~~VLDlGcG~G~~~~~la~~v~~g-~V~gvDis~~~i~~a~~~a~~~-~ni~~i~~d~~~~~~~~~~-------~~~vd  127 (209)
T d1nt2a_          57 DERVLYLGAASGTTVSHLADIVDEG-IIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-------VEKVD  127 (209)
T ss_dssp             SCEEEEETCTTSHHHHHHHHHTTTS-EEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-------CCCEE
T ss_pred             CCEEEEeCCcCCHHHHHHHHhccCC-eEEEEeCCHHHHHHHHHHhhcc-CCceEEEeeccCccccccc-------cceEE
Confidence            7899999988775333333333344 7999999999999888777665 4788888888876553322       22566


Q ss_pred             EEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           92 VFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        92 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      ++++......           +           .-.+++.+...++++|.++..
T Consensus       128 ~v~~~~~~~~-----------~-----------~~~~l~~~~~~LkpgG~l~i~  159 (209)
T d1nt2a_         128 LIYQDIAQKN-----------Q-----------IEILKANAEFFLKEKGEVVIM  159 (209)
T ss_dssp             EEEECCCSTT-----------H-----------HHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEecccChh-----------h-----------HHHHHHHHHHHhccCCeEEEE
Confidence            6666533211           1           112455566677888876654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=92.91  E-value=0.051  Score=42.73  Aligned_cols=38  Identities=26%  Similarity=0.248  Sum_probs=33.0

Q ss_pred             cccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe
Q 025259            5 NMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS   43 (255)
Q Consensus         5 ~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~   43 (255)
                      .+..+|+||+++|-|- |.+|..+++.|.+.|+.|+.++
T Consensus        29 gl~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vs   66 (293)
T d1hwxa1          29 GMTPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVG   66 (293)
T ss_dssp             TCCSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEE
T ss_pred             cCCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEE
Confidence            3456799999999986 7999999999999999988764

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=92.89  E-value=0.058  Score=38.06  Aligned_cols=41  Identities=12%  Similarity=0.165  Sum_probs=33.9

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      +.+. |.|-+|.++++.|++.|++|++.+|+.++.++..++.
T Consensus         3 Ig~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~   43 (152)
T d2ahra2           3 IGII-GVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL   43 (152)
T ss_dssp             EEEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH
T ss_pred             EEEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc
Confidence            3444 6789999999999999999999999998877665544

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=92.81  E-value=1.2  Score=32.35  Aligned_cols=141  Identities=15%  Similarity=0.105  Sum_probs=76.8

Q ss_pred             CCCEEEEeCCC--CchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTAST--QGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~--~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .+++++|....  .....+++..|...|..|+.+.-..+                       .+.+.   +.+. ....+
T Consensus        24 ~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-----------------------~~~~~---l~~~-~~~~~   76 (209)
T d2fr1a2          24 DGTWLVAKYAGTADETSTAAREALESAGARVRELVVDAR-----------------------CGRDE---LAER-LRSVG   76 (209)
T ss_dssp             CSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTT-----------------------CCHHH---HHHH-HTTSC
T ss_pred             CCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCc-----------------------cCHHH---HHHH-hhccC
Confidence            34444444332  23566677777777777665433221                       12222   2222 23446


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCcCccCCCCCChhhHHhHHHHH
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFISSIAGYQPPSAMAMYGVTKTALL  168 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~~~~~~~~~~~~y~~sKaa~~  168 (255)
                      .++.+||..+.........+.        ....+...+.++|++...- ...++.+++..... ..++...-....+++-
T Consensus        77 ~~~~vv~l~~~~~~~~~~~~~--------~~~~~~~~l~l~qal~~~~-~~~~l~~vT~~a~~-~~~~d~~~~p~~A~l~  146 (209)
T d2fr1a2          77 EVAGVLSLLAVDEAEPEEAPL--------ALASLADTLSLVQAMVSAE-LGCPLWTVTESAVA-TGPFERVRNAAHGALW  146 (209)
T ss_dssp             CCSEEEECTTTTCCCCSSCGG--------GCHHHHHHHHHHHHHHHTT-CCCCEEEEEESCSC-SSTTSCCSCGGGHHHH
T ss_pred             CCCeEEEeCCCCCCCCcchhH--------HHHHHHHHHHHHHHHHhCC-CCCcEEEEEcCCcc-cCCCcccCCHhHHhHH
Confidence            789999987754312111111        1223556677778776543 23456666543221 1122233456789999


Q ss_pred             HHHHHHHHHhCC-CcEEEEEe
Q 025259          169 GLTKALAAEMAP-DTRVNCVA  188 (255)
Q Consensus       169 ~l~~~la~e~~~-~i~v~~v~  188 (255)
                      +|+++++.|+.. ..++..+-
T Consensus       147 Gl~r~~~~E~P~l~~~~vDl~  167 (209)
T d2fr1a2         147 GVGRVIALENPAVWGGLVDVP  167 (209)
T ss_dssp             HHHHHHHHHCGGGEEEEEEEC
T ss_pred             HHHHHHHHhCCCceEEEEECC
Confidence            999999999865 45555553

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.80  E-value=0.14  Score=36.50  Aligned_cols=38  Identities=37%  Similarity=0.431  Sum_probs=34.2

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|.||+++|.|= |-+|+.+|+.+...|++|++++.++-
T Consensus        21 ~l~Gk~v~V~Gy-G~iG~g~A~~~rg~G~~V~v~e~dp~   58 (163)
T d1li4a1          21 MIAGKVAVVAGY-GDVGKGCAQALRGFGARVIITEIDPI   58 (163)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-ccccHHHHHHHHhCCCeeEeeecccc
Confidence            478999999985 48999999999999999999999874

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=92.74  E-value=0.095  Score=35.70  Aligned_cols=81  Identities=15%  Similarity=0.078  Sum_probs=56.4

Q ss_pred             cccCCCCEEEEeCCCC----------chHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHH
Q 025259            7 AKRFQGKVAVVTASTQ----------GIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~----------giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      .++-.-|++||.|++.          --+.+.+++|.+.|+.++++..|++....-.    ...+++++-+   -..+.+
T Consensus         2 p~~~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~----d~aD~lYfeP---lt~e~v   74 (127)
T d1a9xa3           2 PKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDP----EMADATYIEP---IHWEVV   74 (127)
T ss_dssp             CCCSSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCG----GGSSEEECSC---CCHHHH
T ss_pred             CCCCCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcCh----hhcceeeeec---CCHHHH
Confidence            3445678999999864          3377889999999999999999987643211    1134555433   346676


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCC
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .+.+++     .++|.++...|.
T Consensus        75 ~~Ii~~-----E~pd~il~~~GG   92 (127)
T d1a9xa3          75 RKIIEK-----ERPDAVLPTMGG   92 (127)
T ss_dssp             HHHHHH-----HCCSEEECSSSH
T ss_pred             HHHHHH-----hCcCCeEEEeee
Confidence            666665     289999887774

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=92.69  E-value=0.036  Score=40.41  Aligned_cols=75  Identities=12%  Similarity=0.117  Sum_probs=45.6

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCe----EEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIE----VIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +|.|.|+ |..|.++|..|++.|++|.+.+|..+.  +..+.++..+..    ......++.-.++++.+++       .
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------~   71 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLE-------N   71 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHT-------T
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhhhhhhhhcchhccccccccccHHHHHh-------c
Confidence            4667765 789999999999999999999986542  334555443210    1111112222333343333       6


Q ss_pred             CcEEEECCC
Q 025259           90 IDVFVLNAA   98 (255)
Q Consensus        90 ~d~lv~~ag   98 (255)
                      .|++|.+..
T Consensus        72 ad~Ii~avp   80 (180)
T d1txga2          72 AEVVLLGVS   80 (180)
T ss_dssp             CSEEEECSC
T ss_pred             cchhhcccc
Confidence            899988665

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.68  E-value=0.56  Score=32.76  Aligned_cols=66  Identities=21%  Similarity=0.158  Sum_probs=42.6

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           13 KVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      |++.|.|+||.||.....-+.+.  .++|+++.-+. ..+.+.+++.+..++..++    .|++..+.+.+.+
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~-N~~~L~~q~~~f~pk~v~i----~d~~~~~~l~~~l   69 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK-NVTRMVEQCLEFSPRYAVM----DDEASAKLLKTML   69 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS-CHHHHHHHHHHHCCSEEEE----SSHHHHHHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC-cHHHHHHHHHHHhhccccc----ccHHHHHHHHHHh
Confidence            57999999999999999988776  46666543222 2355566666666665543    4555544444433

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=92.44  E-value=0.36  Score=31.84  Aligned_cols=34  Identities=24%  Similarity=0.222  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .|+++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~   54 (115)
T d1lvla2          21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE   54 (115)
T ss_dssp             CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence            57777775 57999999999999999999998864

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.29  E-value=0.076  Score=40.92  Aligned_cols=36  Identities=25%  Similarity=0.349  Sum_probs=31.8

Q ss_pred             cccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe
Q 025259            7 AKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS   43 (255)
Q Consensus         7 ~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~   43 (255)
                      ..+|+|++++|-| .|.+|..+++.|.+.|+.|+.+.
T Consensus        31 ~~~l~g~~v~IQG-fGnVG~~~a~~L~e~Gakvvavs   66 (255)
T d1bgva1          31 NDTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLS   66 (255)
T ss_dssp             TCCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEE
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEe
Confidence            3579999999999 68999999999999999987653

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=92.26  E-value=0.19  Score=34.01  Aligned_cols=35  Identities=11%  Similarity=0.090  Sum_probs=30.5

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      ..++++|.|| |.||.++|..|++.|.+|.++.+.+
T Consensus        25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence            3678888875 7999999999999999999998764

>d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: Amyloid beta precursor protein-binding protein 1, APPBP1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.10  E-value=0.028  Score=48.29  Aligned_cols=36  Identities=14%  Similarity=0.228  Sum_probs=31.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeC
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSR   44 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r   44 (255)
                      .+|++.+|+|.|+ ||+|.++++.|+..|.. +.++|.
T Consensus        21 ~~L~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~   57 (529)
T d1yova1          21 EALESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDG   57 (529)
T ss_dssp             HHHHHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECC
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcC
Confidence            4678889999987 78999999999999975 888766

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=91.98  E-value=0.36  Score=35.71  Aligned_cols=104  Identities=13%  Similarity=0.130  Sum_probs=73.3

Q ss_pred             cCC-CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259            9 RFQ-GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus         9 ~l~-~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .++ +++||=.|++.|.-   +..|++.|++|++++.+++.++...+.+...+ .++.++.+|..+..     +     .
T Consensus        12 ~l~~~~rVLDiGcG~G~~---~~~l~~~~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~~l~-----~-----~   78 (231)
T d1vl5a_          12 ALKGNEEVLDVATGGGHV---ANAFAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP-----F-----T   78 (231)
T ss_dssp             TCCSCCEEEEETCTTCHH---HHHHGGGSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCC-----S-----C
T ss_pred             CCCCcCEEEEecccCcHH---HHHHHHhCCEEEEEECCHHHHhhhhhccccccccccccccccccccc-----c-----c
Confidence            344 68999999888854   45678889999999999998888877776654 57888888887632     0     1


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .+.+|.++.+.......      +              +..+++.+...|+++|++++.
T Consensus        79 ~~~fD~v~~~~~l~~~~------d--------------~~~~l~~~~r~LkpgG~l~i~  117 (231)
T d1vl5a_          79 DERFHIVTCRIAAHHFP------N--------------PASFVSEAYRVLKKGGQLLLV  117 (231)
T ss_dssp             TTCEEEEEEESCGGGCS------C--------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccccccccccccC------C--------------HHHHHHHHHHhcCCCcEEEEE
Confidence            14789988877653211      1              123466677778888887764

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=91.92  E-value=0.36  Score=31.94  Aligned_cols=34  Identities=12%  Similarity=0.094  Sum_probs=27.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHc---CCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLE---GASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~---G~~Vv~~~r~~   46 (255)
                      .++++|.|| |.+|.++|..|.+.   |.+|.++.+.+
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~   56 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGE   56 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccc
Confidence            688999988 89999999777654   45798888754

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.80  E-value=0.1  Score=39.83  Aligned_cols=35  Identities=26%  Similarity=0.285  Sum_probs=31.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEe
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISS   43 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~   43 (255)
                      .+|+|++++|-| .|.+|..+++.|.+.|++|+.++
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vs   61 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVS   61 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEE
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEee
Confidence            478999999997 88999999999999999988665

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.58  E-value=0.34  Score=38.22  Aligned_cols=76  Identities=24%  Similarity=0.184  Sum_probs=52.9

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      .++||+||-.|++.|+   ++..+++.|+. |++++.++. .....+.++..  ..++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            3589999999998885   45667788875 999998754 44444444444  3568999988876321          


Q ss_pred             HcCCCcEEEECCC
Q 025259           86 KYGRIDVFVLNAA   98 (255)
Q Consensus        86 ~~g~~d~lv~~ag   98 (255)
                      ...++|+++....
T Consensus        97 ~~~~~D~ivs~~~  109 (316)
T d1oria_          97 PVEKVDIIISEWM  109 (316)
T ss_dssp             SSSCEEEEEECCC
T ss_pred             ccceeEEEeeeee
Confidence            1236899887644

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.46  E-value=0.29  Score=38.27  Aligned_cols=35  Identities=29%  Similarity=0.271  Sum_probs=27.6

Q ss_pred             CCCCE-EEEeCCC------------------CchHHHHHHHHHHcCCeEEEEeC
Q 025259           10 FQGKV-AVVTAST------------------QGIGLGVAERLGLEGASVVISSR   44 (255)
Q Consensus        10 l~~k~-vlVtG~~------------------~giG~~~a~~l~~~G~~Vv~~~r   44 (255)
                      ++||+ ||||.|+                  |..|.++|+.|...|+.|+++.+
T Consensus        15 ~~g~k~VLITaG~T~epID~~pVR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g   68 (290)
T d1p9oa_          15 AQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYR   68 (290)
T ss_dssp             HTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred             ccCCcEEEEccCCcCcccCCCCceEeCCCCchHHHHHHHHHHHHcCCEEEEEec
Confidence            45665 6787664                  45799999999999999998754

>d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Hypothetical protein PF0725
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.45  E-value=1.2  Score=29.37  Aligned_cols=82  Identities=13%  Similarity=0.193  Sum_probs=51.6

Q ss_pred             CEEEEeCCC---CchHHHHHHHHHHcCCeEEEEeCChhHHH--HHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259           13 KVAVVTAST---QGIGLGVAERLGLEGASVVISSRKQKNVD--KAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus        13 k~vlVtG~~---~giG~~~a~~l~~~G~~Vv~~~r~~~~~~--~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      |++.|.|+|   +..|..+.+.|.+.|++|+.+..+.+...  .....+.+..  .++.++   ...++.+..+++++.+
T Consensus         2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i~G~~~y~sl~~lp~~~D~vvi---~vp~~~~~~~l~~~~~   78 (116)
T d1y81a1           2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEIEGLKCYRSVRELPKDVDVIVF---VVPPKVGLQVAKEAVE   78 (116)
T ss_dssp             CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEETTEECBSSGGGSCTTCCEEEE---CSCHHHHHHHHHHHHH
T ss_pred             cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccccCccccccchhccccceEEEE---EeCHHHHHHHHHHHHh
Confidence            789999998   46899999999999999988865543321  1112222222  222221   2457777777777766


Q ss_pred             HcCCCcEEEECCCC
Q 025259           86 KYGRIDVFVLNAAV   99 (255)
Q Consensus        86 ~~g~~d~lv~~ag~   99 (255)
                      .  ++..++...|.
T Consensus        79 ~--g~k~v~~~~g~   90 (116)
T d1y81a1          79 A--GFKKLWFQPGA   90 (116)
T ss_dssp             T--TCCEEEECTTS
T ss_pred             c--CCceEEeccch
Confidence            4  45666665554

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=91.37  E-value=0.095  Score=40.45  Aligned_cols=37  Identities=19%  Similarity=0.242  Sum_probs=32.3

Q ss_pred             CCCEEEEeCCCCchHHHH-----HHHHHHcCCeEEEEeCChh
Q 025259           11 QGKVAVVTASTQGIGLGV-----AERLGLEGASVVISSRKQK   47 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~-----a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .+++++|+.|-||+|+..     +..|++.|.+|.++|-+++
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            578888888899999976     7889999999999999865

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.32  E-value=0.5  Score=32.05  Aligned_cols=36  Identities=22%  Similarity=0.147  Sum_probs=31.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      ++|+++|.| +|.+|.++|..|++.|.+|.++.+.+.
T Consensus        34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence            478888886 579999999999999999999988653

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.31  E-value=0.95  Score=32.05  Aligned_cols=81  Identities=12%  Similarity=0.082  Sum_probs=51.3

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .+|+++|=.|+++|.   ++...++.|++|+.++.++...+.+.+.++..+....+...   +.+..   .........+
T Consensus        40 ~~g~~vLDl~~G~G~---~~i~a~~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~---~~d~~---~~~~~~~~~~  110 (171)
T d1ws6a1          40 PRRGRFLDPFAGSGA---VGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVAL---PVEVF---LPEAKAQGER  110 (171)
T ss_dssp             TTCCEEEEETCSSCH---HHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECS---CHHHH---HHHHHHTTCC
T ss_pred             cCCCeEEEeccccch---hhhhhhhccchhhhcccCHHHHhhhhHHHHhhccccceeee---ehhcc---cccccccCCc
Confidence            367788766655552   33456678999999999999998888888776543332222   22221   2222233357


Q ss_pred             CcEEEECCCC
Q 025259           90 IDVFVLNAAV   99 (255)
Q Consensus        90 ~d~lv~~ag~   99 (255)
                      +|+++.+..+
T Consensus       111 fD~If~DPPY  120 (171)
T d1ws6a1         111 FTVAFMAPPY  120 (171)
T ss_dssp             EEEEEECCCT
T ss_pred             cceeEEcccc
Confidence            9999988653

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=91.16  E-value=0.19  Score=35.04  Aligned_cols=37  Identities=19%  Similarity=0.129  Sum_probs=30.1

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      |-|. |.|-+|+++++.|+++|+.|+..+++++.....
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~   39 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIE   39 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHH
Confidence            4555 559999999999999999999998887665443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.07  E-value=0.1  Score=37.64  Aligned_cols=35  Identities=14%  Similarity=0.136  Sum_probs=29.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCCh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQ   46 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~   46 (255)
                      .+|+|+|.|| |-.|...|..|+++|+. |.++.+..
T Consensus         3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~   38 (196)
T d1gtea4           3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQE   38 (196)
T ss_dssp             GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSS
T ss_pred             CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecC
Confidence            3788999986 67899999999999995 98888864

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=90.99  E-value=0.67  Score=32.23  Aligned_cols=83  Identities=10%  Similarity=0.031  Sum_probs=52.4

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      |-+.|- |-.|.+++++|++.|+.+ ...|+.++.++..++....      -.+...+...+.+.+.+....+.+.....
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            455555 889999999999988765 5678877766665554211      01222233445667777777777665444


Q ss_pred             CCcEEEECCCC
Q 025259           89 RIDVFVLNAAV   99 (255)
Q Consensus        89 ~~d~lv~~ag~   99 (255)
                      +-.++|.+...
T Consensus        81 ~~~~iid~sT~   91 (156)
T d2cvza2          81 EGTYWVDATSG   91 (156)
T ss_dssp             TTEEEEECSCC
T ss_pred             ccccccccccC
Confidence            44566665553

>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Sporulation response regulator Spo0F
species: Bacillus subtilis [TaxId: 1423]

Probab=90.99  E-value=1.2  Score=29.37  Aligned_cols=81  Identities=10%  Similarity=0.161  Sum_probs=56.9

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+|||.--...+-..+.+.|.+.|+.|..+....+.+    +.+++...++.+.-..+-+.+.+ ++++++++....+.
T Consensus         1 NkrILvVDD~~~~~~~l~~~L~~~g~~v~~a~~g~eal----~~~~~~~~dlillD~~mP~~~G~-el~~~lr~~~~~~p   75 (119)
T d1peya_           1 NEKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQAL----DIVTKERPDLVLLDMKIPGMDGI-EILKRMKVIDENIR   75 (119)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHHCCSEEEEESCCTTCCHH-HHHHHHHHHCTTCE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCEEEEeCCHHHHH----HHHHhCCCCEEEEeccCCCCCHH-HHHHHHHHhCCCCc
Confidence            68999999999999999999999999988666544443    34444555666655555565554 45677777766666


Q ss_pred             EEEECC
Q 025259           92 VFVLNA   97 (255)
Q Consensus        92 ~lv~~a   97 (255)
                      +++..+
T Consensus        76 vi~lt~   81 (119)
T d1peya_          76 VIIMTA   81 (119)
T ss_dssp             EEEEES
T ss_pred             EEEEec
Confidence            766654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.89  E-value=0.14  Score=38.35  Aligned_cols=34  Identities=41%  Similarity=0.330  Sum_probs=28.8

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .|+|+|.|| |-.|.++|..|+++|++|.+++|..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            456888875 6789999999999999999999864

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=90.87  E-value=0.11  Score=38.30  Aligned_cols=39  Identities=18%  Similarity=0.085  Sum_probs=34.2

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .+|.+|++.|.|. |.||+++++.+...|++|+.+++...
T Consensus        41 ~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   79 (199)
T d1dxya1          41 KELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPM   79 (199)
T ss_dssp             CCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccceeeeeeec-ccccccccccccccceeeeccCCccc
Confidence            4688999999985 67999999999999999999998654

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=90.79  E-value=1.5  Score=32.64  Aligned_cols=110  Identities=12%  Similarity=0.110  Sum_probs=72.3

Q ss_pred             cCCCCEEEEeCCCCchH-HHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIG-LGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVE   85 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG-~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~   85 (255)
                      ..+.|+||=.|...|.. ..+++.+ ..+..|+.+..+++..+...+.++..|  .++.++..|.  .+.+.++.+. ..
T Consensus        57 ~~~~k~iLEiGT~~GyStl~la~al-~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a--~~~L~~l~~~-~~  132 (227)
T d1susa1          57 LINAKNTMEIGVYTGYSLLATALAI-PEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA--LPVLDEMIKD-EK  132 (227)
T ss_dssp             HHTCCEEEEECCGGGHHHHHHHHHS-CTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH--HHHHHHHHHC-GG
T ss_pred             hcCCCcEEEecchhhhhHHHHHhhC-CCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHH--HHHHHHHHhc-cc
Confidence            45789999999776654 4444455 345689999999999888888888765  3577777665  2333333321 11


Q ss_pred             HcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           86 KYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        86 ~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      ..+++|.++..|....                       .....+.+.++++++|-||+=
T Consensus       133 ~~~~fD~iFiDa~k~~-----------------------y~~~~e~~~~ll~~gGiii~D  169 (227)
T d1susa1         133 NHGSYDFIFVDADKDN-----------------------YLNYHKRLIDLVKVGGVIGYD  169 (227)
T ss_dssp             GTTCBSEEEECSCSTT-----------------------HHHHHHHHHHHBCTTCCEEEE
T ss_pred             cCCceeEEEeccchhh-----------------------hHHHHHHHHhhcCCCcEEEEc
Confidence            2357999999876421                       123344556778888877763

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=90.61  E-value=0.11  Score=34.17  Aligned_cols=40  Identities=13%  Similarity=0.101  Sum_probs=32.5

Q ss_pred             ccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            6 MAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         6 ~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      -..+++||+|+|.|++ .-|..++..|++.+.+|+...|..
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~   65 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLG   65 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTT
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecC
Confidence            3456899999999976 778999999999888877666654

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=90.44  E-value=0.3  Score=32.62  Aligned_cols=34  Identities=26%  Similarity=0.275  Sum_probs=29.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +|+++|.| +|.+|.++|..|++.|.+|.++.+.+
T Consensus        32 ~~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          32 SGEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HSEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCcEEEEC-CcHHHHHHHHHhhcccceEEEEeccc
Confidence            46777766 47999999999999999999998865

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=90.38  E-value=0.36  Score=33.75  Aligned_cols=56  Identities=18%  Similarity=0.179  Sum_probs=39.9

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHHcCCeEEEEE
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKALGIEVIGII   67 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~   67 (255)
                      +.|++.|.|+||.||.....-+.+.  .++|+++.-+. ..+.+.+++++..++..++.
T Consensus         1 ~pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~-N~~~L~~q~~ef~Pk~v~i~   58 (150)
T d1r0ka2           1 QPRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR-NVKDLADAAKRTNAKRAVIA   58 (150)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS-CHHHHHHHHHHTTCSEEEES
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC-CHHHHHHHHHhhccccceec
Confidence            4689999999999999999888765  57776543322 34566677777777665443

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.25  E-value=0.21  Score=37.77  Aligned_cols=35  Identities=20%  Similarity=0.091  Sum_probs=30.1

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHH-cCCeEEEEe
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGL-EGASVVISS   43 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~-~G~~Vv~~~   43 (255)
                      .++++++++|-| .|.+|+.+++.|++ .|+.|+.++
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vs   62 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVS   62 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEE
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEee
Confidence            478999999986 89999999999975 599987664

>d2b3ta1 c.66.1.30 (A:2-275) N5-glutamine methyltransferase, HemK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: N5-glutamine methyltransferase, HemK
domain: N5-glutamine methyltransferase, HemK
species: Escherichia coli [TaxId: 562]

Probab=90.24  E-value=0.6  Score=36.05  Aligned_cols=77  Identities=14%  Similarity=0.084  Sum_probs=56.3

Q ss_pred             CCEEEEeC-CCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           12 GKVAVVTA-STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        12 ~k~vlVtG-~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      +.++|=.| |+|.||.+++..+  ..+.|+++|.++..++-+.+-++..+. ++.+++.|+.+.-         .  ..+
T Consensus       109 ~~~vlDlGtGSG~I~i~la~~~--p~~~v~avDis~~Al~~A~~Na~~~~~~~v~~~~~d~~~~~---------~--~~~  175 (274)
T d2b3ta1         109 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL---------A--GQQ  175 (274)
T ss_dssp             CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGG---------T--TCC
T ss_pred             ccceeeeehhhhHHHHHHHhhC--CcceeeeccchhHHHhHHHHHHHHhCcccceeeeccccccc---------C--CCc
Confidence            44566677 4555666665543  356899999999999988888877765 5999999986531         1  147


Q ss_pred             CcEEEECCCCCC
Q 025259           90 IDVFVLNAAVNP  101 (255)
Q Consensus        90 ~d~lv~~ag~~~  101 (255)
                      +|++|.|..+..
T Consensus       176 fDlIvsNPPYi~  187 (274)
T d2b3ta1         176 FAMIVSNPPYID  187 (274)
T ss_dssp             EEEEEECCCCBC
T ss_pred             eeEEEecchhhh
Confidence            999999988754

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.05  E-value=0.64  Score=36.69  Aligned_cols=75  Identities=13%  Similarity=0.192  Sum_probs=52.4

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHc--CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKAL--GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++|++||-.|++.|+   ++..+++.|+. |++++.++ .++...+.+++.  ..++.++..|+.+.+.          .
T Consensus        37 ~~~~~VLDlGcGtG~---ls~~aa~~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~~l~~----------~  102 (328)
T d1g6q1_          37 FKDKIVLDVGCGTGI---LSMFAAKHGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLEDVHL----------P  102 (328)
T ss_dssp             HTTCEEEEETCTTSH---HHHHHHHTCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------S
T ss_pred             CCcCEEEEeCCCCCH---HHHHHHHhCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehhhccC----------c
Confidence            589999999998874   45566788875 88999875 455555555554  3578899988876320          0


Q ss_pred             cCCCcEEEECCC
Q 025259           87 YGRIDVFVLNAA   98 (255)
Q Consensus        87 ~g~~d~lv~~ag   98 (255)
                      -.++|+++...-
T Consensus       103 ~~~~D~i~se~~  114 (328)
T d1g6q1_         103 FPKVDIIISEWM  114 (328)
T ss_dssp             SSCEEEEEECCC
T ss_pred             ccceeEEEEEec
Confidence            136898887654

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.99  E-value=0.21  Score=36.11  Aligned_cols=37  Identities=22%  Similarity=0.204  Sum_probs=32.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      ..+.|+|+|.|| |--|.+.|..|+++|++|.++.+..
T Consensus        40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~   76 (179)
T d1ps9a3          40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHS   76 (179)
T ss_dssp             CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred             CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccC
Confidence            356899999986 5679999999999999999999864

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=89.68  E-value=0.24  Score=37.35  Aligned_cols=37  Identities=22%  Similarity=0.118  Sum_probs=30.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      ...++|+|.|| |--|..+|..|+++|++|+++.++.+
T Consensus         2 ~~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~   38 (265)
T d2voua1           2 PTTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQ   38 (265)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            35678999986 46689999999999999999998653

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=89.39  E-value=0.15  Score=39.62  Aligned_cols=36  Identities=22%  Similarity=0.196  Sum_probs=30.7

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      -+.|+|+|.||+ --|...|..|+++|++|.++.+++
T Consensus        28 ~~pkkV~IIGaG-~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAG-MAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCB-HHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECCC-HHHHHHHHHHHHCCCCEEEEeCCC
Confidence            357899999875 559999999999999999998765

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=89.32  E-value=2.4  Score=32.51  Aligned_cols=127  Identities=14%  Similarity=0.188  Sum_probs=77.6

Q ss_pred             CCCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+||=..|+.|- -.+++. +. ....|+.++.++.+++.+...++..+.+......+-......        ...+.
T Consensus       102 ~g~~vLD~CAaPGgKt~~la~-l~-~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~--------~~~~~  171 (284)
T d1sqga2         102 NGEHILDLCAAPGGKTTHILE-VA-PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQW--------CGEQQ  171 (284)
T ss_dssp             TTCEEEEESCTTCHHHHHHHH-HC-TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHH--------HTTCC
T ss_pred             ccceeEeccCccccchhhhhh-hh-hhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchh--------ccccc
Confidence            46677766665542 333332 32 235699999999999999999999887655555443332111        11246


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHH---HHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVL---DKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      +|.|+.-|.-+. .+.+...+.-.|   .+.+.-...-...+++.+.++++++|.+||.+.+
T Consensus       172 fd~IL~DaPCSg-~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS  232 (284)
T d1sqga2         172 FDRILLDAPCSA-TGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS  232 (284)
T ss_dssp             EEEEEEECCCCC-GGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred             ccEEEEeccccc-cCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeec
Confidence            898888775443 332322222111   1223344555778888888999999999998754

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=88.99  E-value=0.22  Score=37.91  Aligned_cols=34  Identities=24%  Similarity=0.293  Sum_probs=29.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +|+|+|.|| |--|...|..|++.|++|.++.+++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999976 4568999999999999999998754

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.99  E-value=0.85  Score=31.89  Aligned_cols=84  Identities=11%  Similarity=0.196  Sum_probs=55.1

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC---CHHHHHHHHHHHHHH
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS---NEQHRKNLIDKTVEK   86 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~---~~~~~~~~~~~~~~~   86 (255)
                      .+|+++.|.+.+||.|--++-.+.+.|..+  ..-+++..+++.+.+....  ..-.+.|++   +.+...+.++.+.+.
T Consensus         1 P~G~rvaiit~sGG~~~l~aD~~~~~Gl~l--~~l~~~t~~~L~~~lp~~~--~~~NPlD~~~~~~~~~~~~~l~~~~~d   76 (163)
T d2csua3           1 PRGNKVAIMTNAGGPGVLTADELDKRGLKL--ATLEEKTIEELRSFLPPMA--AVKNPVDMIASARGEDYYRTAKLLLQD   76 (163)
T ss_dssp             CSSSEEEEEESCHHHHHHHHHHHHTTTCEE--CCCCHHHHHHHHHHSCTTC--EESSEEECCTTCCHHHHHHHHHHHHHS
T ss_pred             CCCCeEEEEECChHHHHHHHHHHHHcCCcc--CCCCHHHHHHHHHhCCCcc--cCCCcccccCCCCHHHHHHHHHHHHcC
Confidence            479999999999999999999999888554  4455555555555443321  112234443   566677777666553


Q ss_pred             cCCCcEEEECCC
Q 025259           87 YGRIDVFVLNAA   98 (255)
Q Consensus        87 ~g~~d~lv~~ag   98 (255)
                       +.+|.++....
T Consensus        77 -~~vd~v~v~~~   87 (163)
T d2csua3          77 -PNVDMLIAICV   87 (163)
T ss_dssp             -TTCSEEEEEEE
T ss_pred             -CCcCEEEEeec
Confidence             57887655443

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.78  E-value=0.8  Score=34.22  Aligned_cols=104  Identities=13%  Similarity=0.179  Sum_probs=67.2

Q ss_pred             CCCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Q 025259           11 QGKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGR   89 (255)
Q Consensus        11 ~~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   89 (255)
                      .|.+||=.|+++|. -.++++ +...+..|++++.++..++.+.+..+.. .....+..|..+++.....       .+.
T Consensus        73 pG~~VLDlGaGsG~~t~~la~-~VG~~G~V~aVD~s~~~l~~a~~~a~~~-~~~~~i~~d~~~~~~~~~~-------~~~  143 (227)
T d1g8aa_          73 PGKSVLYLGIASGTTASHVSD-IVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRAL-------VPK  143 (227)
T ss_dssp             TTCEEEEETTTSTTHHHHHHH-HHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTT-------CCC
T ss_pred             CCCEEEEeccCCCHHHHHHHH-HhCCCCEEEEEeCcHHHHHHHHHHHHhc-CCceEEEEECCCccccccc-------ccc
Confidence            37799989977665 444444 3333457999999999988887766544 4567788888876653321       236


Q ss_pred             CcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           90 IDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        90 ~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      +|.+++......                      -...+++.+...++++|.++..
T Consensus       144 vD~i~~d~~~~~----------------------~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         144 VDVIFEDVAQPT----------------------QAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             EEEEEECCCSTT----------------------HHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eEEEEEEccccc----------------------hHHHHHHHHHHhcccCCeEEEE
Confidence            788877544311                      1223566667778888876543

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=88.76  E-value=0.61  Score=33.62  Aligned_cols=76  Identities=13%  Similarity=0.060  Sum_probs=51.0

Q ss_pred             EeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEEC
Q 025259           17 VTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLN   96 (255)
Q Consensus        17 VtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~   96 (255)
                      +..+|-|-|-+ .+.+++.+.+|+++||+++.++.....   ...++.++..+.++.+..   +...  ..+++|.++..
T Consensus        22 ~vD~T~G~GGh-s~~iL~~~~~viaiD~D~~ai~~a~~~---~~~~~~~~~~~f~~~~~~---l~~~--~~~~vdgIl~D   92 (182)
T d1wg8a2          22 YVDATLGGAGH-ARGILERGGRVIGLDQDPEAVARAKGL---HLPGLTVVQGNFRHLKRH---LAAL--GVERVDGILAD   92 (182)
T ss_dssp             EEETTCTTSHH-HHHHHHTTCEEEEEESCHHHHHHHHHT---CCTTEEEEESCGGGHHHH---HHHT--TCSCEEEEEEE
T ss_pred             EEEeCCCCcHH-HHHHhcccCcEEEEhhhhhHHHHHhhc---cccceeEeehHHHHHHHH---HHHc--CCCccCEEEEE
Confidence            34455555555 455666777999999999887665432   345788999888874332   2221  13579999999


Q ss_pred             CCCCC
Q 025259           97 AAVNP  101 (255)
Q Consensus        97 ag~~~  101 (255)
                      -|+.+
T Consensus        93 LGvSs   97 (182)
T d1wg8a2          93 LGVSS   97 (182)
T ss_dssp             CSCCH
T ss_pred             ccCCH
Confidence            99864

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=88.40  E-value=0.16  Score=37.32  Aligned_cols=32  Identities=16%  Similarity=0.086  Sum_probs=27.5

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCeEEEEeC
Q 025259           13 KVAVVTASTQGIGLG-----VAERLGLEGASVVISSR   44 (255)
Q Consensus        13 k~vlVtG~~~giG~~-----~a~~l~~~G~~Vv~~~r   44 (255)
                      |++.|||-++|+|+.     +++.|+++|.+|.+++-
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id~   38 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKP   38 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEECc
Confidence            789999999899975     67888899999998863

>d2b9ea1 c.66.1.38 (A:133-425) NOL1R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: NOL1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.37  E-value=3  Score=32.14  Aligned_cols=128  Identities=9%  Similarity=0.026  Sum_probs=69.8

Q ss_pred             CCCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|.+||=..|+.|- -.+++. +...+..|+.++.+..+++.+.+.++..+. ++.+...|..+...       ....++
T Consensus        94 ~g~~vLD~cAapGgKt~~la~-l~~~~~~i~a~d~~~~R~~~l~~~l~r~g~~~~~~~~~d~~~~~~-------~~~~~~  165 (293)
T d2b9ea1          94 PGSHVIDACAAPGNKTSHLAA-LLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP-------SDPRYH  165 (293)
T ss_dssp             TTCEEEESSCTTCHHHHHHHH-HHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT-------TCGGGT
T ss_pred             ccceEEecccchhhHHHHHHH-HhcCCceEeeecCCHHHHHHHHHHHHhcCccceeeeehhhhhhcc-------cccccc
Confidence            46677777766553 444443 445556899999999999999999988874 46666767653221       112235


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHH---HH-hH-HHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWE---IN-VK-SSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~---~n-~~-~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      ++|.|+..|.-+. .+.+...+...|.....   .+ +. -...+.+++.. ++++|.+||.+-+
T Consensus       166 ~fD~VL~DaPCSg-~G~~~r~p~~~~~~~~~~~~~~~l~~~Q~~il~~a~~-l~~gG~lvYsTCS  228 (293)
T d2b9ea1         166 EVHYILLDPSCSG-SGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALT-FPSLQRLVYSTCS  228 (293)
T ss_dssp             TEEEEEECCCCCC-------------------CCHHHHHHHHHHHHHHHTT-CTTCCEEEEEESC
T ss_pred             eeeEEeecCcccc-hhhhcccchhhccCCcchhhHHHHhhhhHHhHHHhhh-cccccEEEEeecc
Confidence            7899988876543 22222222211211111   11 11 12334444543 5678899998754

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=88.34  E-value=0.94  Score=33.52  Aligned_cols=101  Identities=9%  Similarity=-0.000  Sum_probs=71.3

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC-CeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG-IEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      |.+||=.|++.|.   ++..|++.+.+|+.+|.+++-++...+.++..+ .++.++..|..+..     +.     .+.+
T Consensus        17 ~~rILDiGcGtG~---~~~~la~~~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~-----~~-----~~~f   83 (234)
T d1xxla_          17 EHRVLDIGAGAGH---TALAFSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP-----FP-----DDSF   83 (234)
T ss_dssp             TCEEEEESCTTSH---HHHHHGGGSSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCC-----SC-----TTCE
T ss_pred             CCEEEEeCCcCcH---HHHHHHHhCCeEEEEeCChhhhhhhhhhhccccccccccccccccccc-----cc-----cccc
Confidence            7899999988884   445667788999999999999888887777665 46888888876522     11     1478


Q ss_pred             cEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           91 DVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        91 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      |.++.+-.... .   .  ++              ..+++.+...|+++|.+++.
T Consensus        84 D~v~~~~~l~~-~---~--d~--------------~~~l~~~~r~LkpgG~~~~~  118 (234)
T d1xxla_          84 DIITCRYAAHH-F---S--DV--------------RKAVREVARVLKQDGRFLLV  118 (234)
T ss_dssp             EEEEEESCGGG-C---S--CH--------------HHHHHHHHHHEEEEEEEEEE
T ss_pred             ceeeeeceeec-c---c--CH--------------HHHHHHHHHeeCCCcEEEEE
Confidence            98777655422 1   1  11              24566777788888887764

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=87.88  E-value=0.79  Score=34.12  Aligned_cols=80  Identities=13%  Similarity=0.042  Sum_probs=58.3

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHH-cC----CeEEEEeCChhHHHHHHHHHHHc------CCeEEEEEecCCCHHHHHHH
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGL-EG----ASVVISSRKQKNVDKAVEKLKAL------GIEVIGIICHVSNEQHRKNL   79 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~-~G----~~Vv~~~r~~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~   79 (255)
                      .+.+||..|.++|--.++..+++. .|    .+|+.+.++++-.+...+.+...      -.++.+...|..+.      
T Consensus        80 ~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~------  153 (223)
T d1r18a_          80 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG------  153 (223)
T ss_dssp             TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC------
T ss_pred             CCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEecccccc------
Confidence            478999999999988888888865 45    47999999998777666554332      24688888887531      


Q ss_pred             HHHHHHHcCCCcEEEECCCCC
Q 025259           80 IDKTVEKYGRIDVFVLNAAVN  100 (255)
Q Consensus        80 ~~~~~~~~g~~d~lv~~ag~~  100 (255)
                          ....+++|.++.+++..
T Consensus       154 ----~~~~~~fD~Iiv~~a~~  170 (223)
T d1r18a_         154 ----YPPNAPYNAIHVGAAAP  170 (223)
T ss_dssp             ----CGGGCSEEEEEECSCBS
T ss_pred             ----cccccceeeEEEEeech
Confidence                11235789999988863

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=87.71  E-value=0.34  Score=36.18  Aligned_cols=37  Identities=14%  Similarity=0.123  Sum_probs=31.3

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .-..|+++|.||+ --|...|..|++.|++|.++.++.
T Consensus        46 ~~~~k~VvIIGaG-pAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          46 TKNKDSVLIVGAG-PSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             CSSCCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             ccCCceEEEEccc-HHHHHHHHHHHHhccceeeEeecc
Confidence            3468999999875 558999999999999999998754

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=87.69  E-value=3.2  Score=32.36  Aligned_cols=126  Identities=15%  Similarity=0.167  Sum_probs=74.7

Q ss_pred             CCCEEEEeCCCCchHHHH-HHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCC-eEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           11 QGKVAVVTASTQGIGLGV-AERLGLEGASVVISSRKQKNVDKAVEKLKALGI-EVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~-a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      .|.+||=..|+.| |+.+ ...+......|+..+.++.+++.+.+.++..+. ++..+..|.....          ...+
T Consensus       116 ~g~~vlD~CAapG-gKt~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~----------~~~~  184 (313)
T d1ixka_         116 PGEIVADMAAAPG-GKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG----------ELNV  184 (313)
T ss_dssp             TTCEEEECCSSCS-HHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG----------GGCC
T ss_pred             ccceeeecccchh-hhhHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccc----------cccc
Confidence            4666666666555 4332 223334455789999999999999988888764 4555544443221          1234


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHH---HHHHHHHhHHHHHHHHHHHhcccCCCeEEEEcCc
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVL---DKLWEINVKSSILLMQDAAPHMQKGSSVVFISSI  148 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vss~  148 (255)
                      .+|.++.-|.-.. .+.+...+...|   .+.+.-...-...+.+.+.++++++|.+||.+-+
T Consensus       185 ~fD~ILvDaPCSg-~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTCS  246 (313)
T d1ixka_         185 EFDKILLDAPCTG-SGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS  246 (313)
T ss_dssp             CEEEEEEECCTTS-TTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             cccEEEEcccccc-CCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeecc
Confidence            6898887664332 222221111111   1334445566777888888889999999998754

>d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: CoA-binding domain
domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=87.48  E-value=0.27  Score=33.43  Aligned_cols=87  Identities=23%  Similarity=0.268  Sum_probs=55.7

Q ss_pred             cCCCCEEEEeCCC---CchHHHHHHHHHHcC-CeEEEEeCChhHHH--HHHHHHHHcC--CeEEEEEecCCCHHHHHHHH
Q 025259            9 RFQGKVAVVTAST---QGIGLGVAERLGLEG-ASVVISSRKQKNVD--KAVEKLKALG--IEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus         9 ~l~~k~vlVtG~~---~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~--~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~   80 (255)
                      -++.|+|.|.|+|   +..|..+.+.|.+.| ..|+.+....+...  .+...+.+..  .++.++   ....+.+.+++
T Consensus         5 lf~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~G~~~y~sl~dlp~~vDlvvi---~vp~~~~~~~~   81 (129)
T d2csua1           5 FFNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQGVKAYKSVKDIPDEIDLAII---VVPKRFVKDTL   81 (129)
T ss_dssp             TTSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEETTEECBSSTTSCSSCCSEEEE---CSCHHHHHHHH
T ss_pred             hCCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccCCeEeecchhhcCCCCceEEE---ecChHHhHHHH
Confidence            3789999999999   788999999987665 46888876654321  1222222222  233222   23578888888


Q ss_pred             HHHHHHcCCCc-EEEECCCCC
Q 025259           81 DKTVEKYGRID-VFVLNAAVN  100 (255)
Q Consensus        81 ~~~~~~~g~~d-~lv~~ag~~  100 (255)
                      +++.+.  ++. +++..+|+.
T Consensus        82 ~~~~~~--g~~~~vi~s~Gf~  100 (129)
T d2csua1          82 IQCGEK--GVKGVVIITAGFG  100 (129)
T ss_dssp             HHHHHH--TCCEEEECCCSST
T ss_pred             HHHHHc--CCCEEEEeccccc
Confidence            888776  455 555555643

>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Aldolase
family: Class I aldolase
domain: KDPG aldolase
species: Escherichia coli [TaxId: 562]

Probab=87.36  E-value=1.5  Score=32.24  Aligned_cols=87  Identities=17%  Similarity=0.170  Sum_probs=60.8

Q ss_pred             Ccccccccc--C-CCCEE-EEeCCCCchHHHHHHHHHHcCCeEE-EEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259            1 MEKVNMAKR--F-QGKVA-VVTASTQGIGLGVAERLGLEGASVV-ISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus         1 ~~~~~~~~~--l-~~k~v-lVtG~~~giG~~~a~~l~~~G~~Vv-~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      |++.++..+  | +++.+ +|++-+---...+++.|.+.|.+++ ++-|++.. .+..+.+.+...++.+=..-+.+.++
T Consensus         1 m~~~~~~~~~~l~~~~iipvlr~~~~~~a~~~~~al~~~Gi~~iEitl~tp~a-~~~I~~l~~~~p~~~vGaGTV~~~~~   79 (213)
T d1wbha1           1 MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVLNVTLRTECA-VDAIRAIAKEVPEAIVGAGTVLNPQQ   79 (213)
T ss_dssp             CCCCSSCHHHHHHSCSEEEEECCSSGGGHHHHHHHHHHTTCCEEEEESCSTTH-HHHHHHHHHHCTTSEEEEESCCSHHH
T ss_pred             CCCcccCHHHHHHhCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEeCCChhH-HHHHHHHHHHCCCCeeeccccccHHH
Confidence            555554332  3 34443 7778888889999999999999965 66666554 45555555543457777889999999


Q ss_pred             HHHHHHHHHHHcCCCcEEE
Q 025259           76 RKNLIDKTVEKYGRIDVFV   94 (255)
Q Consensus        76 ~~~~~~~~~~~~g~~d~lv   94 (255)
                      ++++.+.      +.+++|
T Consensus        80 ~~~a~~a------Ga~Fiv   92 (213)
T d1wbha1          80 LAEVTEA------GAQFAI   92 (213)
T ss_dssp             HHHHHHH------TCSCEE
T ss_pred             HHHHHHC------CCcEEE
Confidence            9888774      566665

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=87.33  E-value=0.29  Score=36.32  Aligned_cols=34  Identities=21%  Similarity=0.399  Sum_probs=29.4

Q ss_pred             CCEEEEeCCCCchHHH-----HHHHHHHcCCeEEEEeCC
Q 025259           12 GKVAVVTASTQGIGLG-----VAERLGLEGASVVISSRK   45 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~-----~a~~l~~~G~~Vv~~~r~   45 (255)
                      +|+|.|+|+.||+|+.     ++..|++.|.+|.++|-+
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~D   40 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD   40 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeCC
Confidence            7899999999999874     677788899999999865

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=87.33  E-value=1.3  Score=33.75  Aligned_cols=103  Identities=11%  Similarity=0.006  Sum_probs=70.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLE-GASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+.+||=.|++.|.   ++..|+++ |++|++++.++..++...+..+..+  .++.++.+|..+..     +     .-
T Consensus        67 ~~~~vLDiGcG~G~---~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~-----~-----~~  133 (282)
T d2o57a1          67 RQAKGLDLGAGYGG---AARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-----C-----ED  133 (282)
T ss_dssp             TTCEEEEETCTTSH---HHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-----S-----CT
T ss_pred             CCCEEEEeCCCCcH---HHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccccccccc-----c-----cc
Confidence            57899999987663   44555554 8899999999998888877776654  57999999987631     0     11


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      +.+|+++..-.....+      ++              ..+++.+...|+++|++++..
T Consensus       134 ~sfD~V~~~~~l~h~~------d~--------------~~~l~~~~~~LkpgG~l~~~~  172 (282)
T d2o57a1         134 NSYDFIWSQDAFLHSP------DK--------------LKVFQECARVLKPRGVMAITD  172 (282)
T ss_dssp             TCEEEEEEESCGGGCS------CH--------------HHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccchhhccchhhhcc------CH--------------HHHHHHHHHhcCCCcEEEEEE
Confidence            4689888765542211      11              234667777888888877653

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.31  E-value=0.32  Score=38.07  Aligned_cols=32  Identities=31%  Similarity=0.275  Sum_probs=23.9

Q ss_pred             CEEEEeCCCCchHH-----HHHHHHHHcCCeEEEEeCC
Q 025259           13 KVAVVTASTQGIGL-----GVAERLGLEGASVVISSRK   45 (255)
Q Consensus        13 k~vlVtG~~~giG~-----~~a~~l~~~G~~Vv~~~r~   45 (255)
                      |+|+|++|++| |.     +++++|.++|++|..++..
T Consensus         1 kkili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            67888776544 54     6889998999999876654

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.04  E-value=1.4  Score=32.64  Aligned_cols=109  Identities=15%  Similarity=0.125  Sum_probs=70.1

Q ss_pred             ccCCCCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHH
Q 025259            8 KRFQGKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      +..+.|+||=.|...|. ...+++.+ ..+..|+.++.+++..+...+.++..+  .++.+...|..  +.+.+++..- 
T Consensus        56 ~~~~~k~vLEiGt~~GyStl~~a~al-~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~--e~l~~~~~~~-  131 (219)
T d2avda1          56 RLIQAKKALDLGTFTGYSALALALAL-PADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL--ETLDELLAAG-  131 (219)
T ss_dssp             HHTTCCEEEEECCTTSHHHHHHHTTS-CTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH--HHHHHHHHTT-
T ss_pred             HccCCCeEEEEechhhHHHHHHHHhC-CCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehh--hcchhhhhhc-
Confidence            34578999999976665 44555554 335589999999999888888887764  56777776653  2233322211 


Q ss_pred             HHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           85 EKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                       ..+++|.++..+....                       .....+.+.++++++|-||+
T Consensus       132 -~~~~fD~ifiD~dk~~-----------------------y~~~~~~~~~lL~~GGvii~  167 (219)
T d2avda1         132 -EAGTFDVAVVDADKEN-----------------------CSAYYERCLQLLRPGGILAV  167 (219)
T ss_dssp             -CTTCEEEEEECSCSTT-----------------------HHHHHHHHHHHEEEEEEEEE
T ss_pred             -ccCCccEEEEeCCHHH-----------------------HHHHHHHHHHHhcCCcEEEE
Confidence             1247899998876422                       11223455678887777665

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=86.99  E-value=0.36  Score=35.05  Aligned_cols=37  Identities=24%  Similarity=0.227  Sum_probs=29.8

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKA   52 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~   52 (255)
                      +|.|.| .|.+|..+|..|+ +|++|+++|.+++..+.+
T Consensus         2 kI~ViG-lG~vGl~~a~~~a-~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAG-SGYVGLSLGVLLS-LQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSCHHHHHHH
T ss_pred             EEEEEC-CChhHHHHHHHHH-CCCcEEEEECCHHHHHHH
Confidence            366775 8999999998665 699999999998876554

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=86.82  E-value=1.7  Score=27.55  Aligned_cols=72  Identities=22%  Similarity=0.185  Sum_probs=47.2

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +.|++.+.|-+|--=.++|+.|+++|+.|...|+.....   .+.+.+.|.+++.  .+-  ++.           ....
T Consensus         7 ~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~---~~~L~~~Gi~v~~--g~~--~~~-----------i~~~   68 (96)
T d1p3da1           7 RVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVV---TQRLAQAGAKIYI--GHA--EEH-----------IEGA   68 (96)
T ss_dssp             TCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHH---HHHHHHTTCEEEE--SCC--GGG-----------GTTC
T ss_pred             hCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChh---hhHHHHCCCeEEE--CCc--ccc-----------CCCC
Confidence            467888888543222678999999999999999975432   2444556655432  211  211           1268


Q ss_pred             cEEEECCCCC
Q 025259           91 DVFVLNAAVN  100 (255)
Q Consensus        91 d~lv~~ag~~  100 (255)
                      |.+|+..++.
T Consensus        69 d~vV~S~AI~   78 (96)
T d1p3da1          69 SVVVVSSAIK   78 (96)
T ss_dssp             SEEEECTTSC
T ss_pred             CEEEECCCcC
Confidence            9999998874

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.79  E-value=5.7  Score=30.91  Aligned_cols=104  Identities=13%  Similarity=0.047  Sum_probs=61.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHHH----------cCCeEEEEEecCCCHHHHHHHH
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLKA----------LGIEVIGIICHVSNEQHRKNLI   80 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~D~~~~~~~~~~~   80 (255)
                      +.+++=.|++.|  ..+.......|+ .+++++.++...+-....+++          ...++.++..|+.+..--+..+
T Consensus       152 ~~~vlD~GcG~G--~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~~~~~~~  229 (328)
T d1nw3a_         152 DDLFVDLGSGVG--QVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIA  229 (328)
T ss_dssp             TCEEEEETCTTS--HHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHHHHHHHH
T ss_pred             CCEEEEcCCCCC--HHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccccccccC
Confidence            567777775444  333333334566 599999998776655544433          2357899999999866443333


Q ss_pred             HHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           81 DKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        81 ~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                              ..|+++.|.-.+.          .++.           ..++.....|+++++||..-
T Consensus       230 --------~advi~~~~~~f~----------~~~~-----------~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         230 --------NTSVIFVNNFAFG----------PEVD-----------HQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             --------HCSEEEECCTTTC----------HHHH-----------HHHHHHHTTCCTTCEEEESS
T ss_pred             --------cceEEEEcceecc----------hHHH-----------HHHHHHHHhCCCCcEEEEec
Confidence                    2677765533221          1222           12344445678889987643

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=86.60  E-value=0.21  Score=38.20  Aligned_cols=34  Identities=18%  Similarity=0.326  Sum_probs=28.0

Q ss_pred             CEEEEeCCCCchHHHH-----HHHHHHcCCeEEEEeCChh
Q 025259           13 KVAVVTASTQGIGLGV-----AERLGLEGASVVISSRKQK   47 (255)
Q Consensus        13 k~vlVtG~~~giG~~~-----a~~l~~~G~~Vv~~~r~~~   47 (255)
                      |+|.|+| -||+|+..     +..|++.|.+|.++|-+.+
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D~q   40 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPK   40 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEECTT
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecCCC
Confidence            6788997 88988765     5588899999999998754

>d1qo0d_ c.23.1.3 (D:) Positive regulator of the amidase operon AmiR {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: Positive regulator of the amidase operon AmiR
domain: Positive regulator of the amidase operon AmiR
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=86.53  E-value=0.34  Score=34.81  Aligned_cols=84  Identities=12%  Similarity=0.052  Sum_probs=58.4

Q ss_pred             ccccccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHH
Q 025259            4 VNMAKRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus         4 ~~~~~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ..++..|++.+|||.--.......+...|.+.|+.|..+....+.++        ...++.+.-+++-. .....+ .++
T Consensus         3 ~~~~~~l~~~~iLvvdd~~~~~~~l~~~L~~~G~~v~~~~~~~~al~--------~~~Dlvl~D~~mp~-~~~~~~-~~~   72 (189)
T d1qo0d_           3 NSLLGSLRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAFD--------VPVDVVFTSIFQNR-HHDEIA-ALL   72 (189)
T ss_dssp             HHHHHTGGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSCS--------SCCSEEEEECCSST-HHHHHH-HHH
T ss_pred             hHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCcceecCCHHHhcc--------CCCCEEEEcCCCCC-cHHHHH-HHH
Confidence            35667899999999999999999999999999999998877665442        24455555444332 233333 344


Q ss_pred             HHHcCCCcEEEECC
Q 025259           84 VEKYGRIDVFVLNA   97 (255)
Q Consensus        84 ~~~~g~~d~lv~~a   97 (255)
                      ....+.+-+++..+
T Consensus        73 ~~~~p~~pvI~lta   86 (189)
T d1qo0d_          73 AAGTPRTTLVALVE   86 (189)
T ss_dssp             HHSCTTCEEEEEEC
T ss_pred             HHcCCCCCEEEEec
Confidence            55556666766654

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=86.45  E-value=4.6  Score=31.01  Aligned_cols=106  Identities=7%  Similarity=-0.060  Sum_probs=65.5

Q ss_pred             CCCEEEEeCCC-CchHHHHHHHHH-HcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTAST-QGIGLGVAERLG-LEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        11 ~~k~vlVtG~~-~giG~~~a~~l~-~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      .|.+||=.|++ |++    +..++ +.|++|+.++.+++..+...+.++..+  .++.+...|...       .      
T Consensus        61 ~G~~VLDiGCG~G~~----~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~~-------~------  123 (291)
T d1kpia_          61 PGMTLLDIGCGWGST----MRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE-------F------  123 (291)
T ss_dssp             TTCEEEEETCTTSHH----HHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGGG-------C------
T ss_pred             CCCEEEEecCcchHH----HHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhcccc-------c------
Confidence            48899999987 444    44444 349999999999998888888777754  456665555421       1      


Q ss_pred             cCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEE
Q 025259           87 YGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVF  144 (255)
Q Consensus        87 ~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~  144 (255)
                      -+++|.++..-..-....+....-.+.+           -.+.+.+...|+++|+++.
T Consensus       124 ~~~fD~i~sie~~eH~~~~~~~~~~~~~-----------~~~f~~i~~~LkpgG~~~l  170 (291)
T d1kpia_         124 DEPVDRIVSLGAFEHFADGAGDAGFERY-----------DTFFKKFYNLTPDDGRMLL  170 (291)
T ss_dssp             CCCCSEEEEESCGGGTTCCSSCCSTTHH-----------HHHHHHHHHTSCTTCEEEE
T ss_pred             ccccceEeechhHHhcchhhhhhHHHHH-----------HHHHHHHHHhCCCCCceEE
Confidence            1479988876553221111111111222           2345677778889998664

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=86.41  E-value=2.1  Score=27.86  Aligned_cols=34  Identities=21%  Similarity=0.211  Sum_probs=27.1

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHH---cCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLGL---EGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~---~G~~Vv~~~r~~   46 (255)
                      .|+++|.|| |.+|.++|..|.+   .|..|.++.|.+
T Consensus        18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~   54 (117)
T d1feca2          18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD   54 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred             CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence            688888876 6899999987655   488899998864

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=86.31  E-value=0.37  Score=35.29  Aligned_cols=31  Identities=16%  Similarity=0.188  Sum_probs=26.7

Q ss_pred             EEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           15 AVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        15 vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      |+|.| +|--|..+|..|+++|.+|.++.++.
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            67776 56779999999999999999998865

>d1c4oa2 c.37.1.19 (A:410-583) Nucleotide excision repair enzyme UvrB {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Thermus thermophilus [TaxId: 274]

Probab=86.30  E-value=3.4  Score=29.26  Aligned_cols=64  Identities=16%  Similarity=0.161  Sum_probs=50.9

Q ss_pred             HHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Q 025259           33 GLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        33 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      .+.|-.++++..+....+.+...+++.|.+...+..++.+ .+-++.++++.+  |++++||..--.
T Consensus        28 ~~~g~r~lvfc~t~~~~~~l~~~L~~~Gi~a~~~Hg~~~~-~eR~~~l~~F~~--G~~~vLVaT~v~   91 (174)
T d1c4oa2          28 AARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDA-FKRQALIRDLRL--GHYDCLVGINLL   91 (174)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHHTTCCEEEECTTCCH-HHHHHHHHHHHT--TSCSEEEESCCC
T ss_pred             HhcCCcEEEEEcchhHHHHHHHHHHhcCCceEEEecccch-HHHHHHHHHHHC--CCeEEEEeeeee
Confidence            3568889999999999999999999999999999999874 444445555543  789999986643

>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Alpha-glucosidase AglA
species: Thermotoga maritima [TaxId: 2336]

Probab=86.18  E-value=0.68  Score=32.93  Aligned_cols=75  Identities=15%  Similarity=0.131  Sum_probs=45.3

Q ss_pred             EEEEeCCCCchHH--HHHHHHHHc----CCeEEEEeCChhHHHHHHHHHHH----cCCeEEEEEecCCCHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGL--GVAERLGLE----GASVVISSRKQKNVDKAVEKLKA----LGIEVIGIICHVSNEQHRKNLIDKT   83 (255)
Q Consensus        14 ~vlVtG~~~giG~--~~a~~l~~~----G~~Vv~~~r~~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~   83 (255)
                      ++.|.|| |.+|.  ++...++..    +.+++++|++++.++.....+++    .+....+..  .+|.++   .+   
T Consensus         4 KI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~--~td~~e---aL---   74 (171)
T d1obba1           4 KIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEK--TMNLDD---VI---   74 (171)
T ss_dssp             EEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEE--ESCHHH---HH---
T ss_pred             EEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEE--eCChhh---cc---
Confidence            5778886 55554  455556543    35799999999988765555544    233333222  123222   12   


Q ss_pred             HHHcCCCcEEEECCCCCC
Q 025259           84 VEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        84 ~~~~g~~d~lv~~ag~~~  101 (255)
                          ...|++|+.++...
T Consensus        75 ----~dad~Vv~~~~~g~   88 (171)
T d1obba1          75 ----IDADFVINTAMVGG   88 (171)
T ss_dssp             ----TTCSEEEECCCTTH
T ss_pred             ----cCCCeEeeeccccc
Confidence                37999999998643

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.14  E-value=0.4  Score=37.71  Aligned_cols=36  Identities=17%  Similarity=0.255  Sum_probs=30.1

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      ++|+|+|.|| |--|..+|..|+++|++|.++.++..
T Consensus         1 k~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           1 KSKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            4789999986 45789999999999999999987653

>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Gtf glycosyltransferase
domain: TDP-epi-vancosaminyltransferase GtfA
species: Amycolatopsis orientalis [TaxId: 31958]

Probab=86.04  E-value=1.6  Score=34.21  Aligned_cols=78  Identities=19%  Similarity=0.229  Sum_probs=45.7

Q ss_pred             EEEEeCCCCc-h--HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC----------------HH
Q 025259           14 VAVVTASTQG-I--GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN----------------EQ   74 (255)
Q Consensus        14 ~vlVtG~~~g-i--G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~----------------~~   74 (255)
                      .++.++||+| |  -.+++++|+++|++|++++...  .   .+.+++.|..+..+..+...                ..
T Consensus         3 il~~~~gt~Ghi~P~laLA~~L~~rGh~V~~~~~~~--~---~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (391)
T d1pn3a_           3 VLITGCGSRGDTEPLVALAARLRELGADARMCLPPD--Y---VERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVTE   77 (391)
T ss_dssp             EEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEECGG--G---HHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHHH
T ss_pred             EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEEEChh--h---HhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHHH
Confidence            3444556632 3  5679999999999998877422  1   23344445555544433221                23


Q ss_pred             HHHHHHHHHHHHcCCCcEEEEC
Q 025259           75 HRKNLIDKTVEKYGRIDVFVLN   96 (255)
Q Consensus        75 ~~~~~~~~~~~~~g~~d~lv~~   96 (255)
                      .+...++.+.+....+|.+|..
T Consensus        78 ~~~~~~~~l~~~~~~~D~vi~~   99 (391)
T d1pn3a_          78 VVAEWFDKVPAAIEGCDAVVTT   99 (391)
T ss_dssp             HHHHHHHHHHHHHTTCSEEEEE
T ss_pred             HHHHHHHHHHHHhcCCCeEEEc
Confidence            3455555665555578888774

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=85.99  E-value=1.6  Score=27.22  Aligned_cols=68  Identities=24%  Similarity=0.242  Sum_probs=45.5

Q ss_pred             EEEEeCCCCchHH-HHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           14 VAVVTASTQGIGL-GVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        14 ~vlVtG~~~giG~-~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      ++-+.| -+|+|- ++|+.|.++|+.|...|+.+..   ..+.+++.|.+++. .-|..+              ....|.
T Consensus         3 ~ihfiG-IgG~GMs~LA~~L~~~G~~VsGSD~~~~~---~t~~L~~~Gi~i~~-gh~~~~--------------i~~~d~   63 (89)
T d1j6ua1           3 KIHFVG-IGGIGMSAVALHEFSNGNDVYGSNIEETE---RTAYLRKLGIPIFV-PHSADN--------------WYDPDL   63 (89)
T ss_dssp             EEEEET-TTSHHHHHHHHHHHHTTCEEEEECSSCCH---HHHHHHHTTCCEES-SCCTTS--------------CCCCSE
T ss_pred             EEEEEe-ECHHHHHHHHHHHHhCCCeEEEEeCCCCh---hHHHHHHCCCeEEe-eecccc--------------cCCCCE
Confidence            455554 345554 7899999999999999998643   33457787866542 112111              136899


Q ss_pred             EEECCCCC
Q 025259           93 FVLNAAVN  100 (255)
Q Consensus        93 lv~~ag~~  100 (255)
                      +|+..++.
T Consensus        64 vV~SsAI~   71 (89)
T d1j6ua1          64 VIKTPAVR   71 (89)
T ss_dssp             EEECTTCC
T ss_pred             EEEecCcC
Confidence            99999974

>d1v71a1 c.79.1.1 (A:6-323) Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c) {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Hypothetical protein C320.14 (SPCC320.14, SPCC330.15c)
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=85.91  E-value=3.1  Score=32.15  Aligned_cols=58  Identities=19%  Similarity=0.092  Sum_probs=37.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCC
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSN   72 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~   72 (255)
                      ..+|+..+|..|.+++..-+..|..++++...... +.....++..|.++..+..+..+
T Consensus        70 ~~vv~~ssGN~g~a~A~~a~~~g~~~~i~~p~~~~-~~k~~~l~~~Ga~vi~~~~~~~~  127 (318)
T d1v71a1          70 AGVLTFSSGNHAQAIALSAKILGIPAKIIMPLDAP-EAKVAATKGYGGQVIMYDRYKDD  127 (318)
T ss_dssp             HCEEECCSSHHHHHHHHHHHHTTCCEEEEEETTCC-HHHHHHHHHTTCEEEEECTTTTC
T ss_pred             ceeeeeccchhhHHHHHhhcccccceeeccccccc-HHHHHHHHHcCCcEEeccCCchH
Confidence            35888888999999999988899885544332222 22345566677777665544433

>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Glutamate mutase, small subunit
species: Clostridium cochlearium [TaxId: 1494]

Probab=85.82  E-value=3.7  Score=27.73  Aligned_cols=87  Identities=15%  Similarity=0.088  Sum_probs=59.5

Q ss_pred             CCCEEEEeCCC---CchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHH
Q 025259           11 QGKVAVVTAST---QGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVE   85 (255)
Q Consensus        11 ~~k~vlVtG~~---~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~   85 (255)
                      +.++++++-..   -.+|..++..+++ .||+|+-.+.+.+ .++..+.+.+.+.++..+.+=.. ....+.++.+.+++
T Consensus         2 ~k~kVvi~~~~gD~H~lG~~mva~~l~~~G~~V~~LG~~~p-~e~iv~a~~~~~~d~v~lS~~~~~~~~~~~~~~~~l~~   80 (137)
T d1ccwa_           2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP-QELFIKAAIETKADAILVSSLYGQGEIDCKGLRQKCDE   80 (137)
T ss_dssp             CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC-HHHHHHHHHHHTCSEEEEEECSSTHHHHHTTHHHHHHH
T ss_pred             CCCEEEEEecCCChhHHHHHHHHHHHHHCCCeEEecccccC-HHHHHHHHHhcCCCEEEEeeccccchHHHHHHHHHHHH
Confidence            45777775443   4789999988876 6999997776543 35666667777788887765444 46667777777776


Q ss_pred             HcCCCcEEEECCCC
Q 025259           86 KYGRIDVFVLNAAV   99 (255)
Q Consensus        86 ~~g~~d~lv~~ag~   99 (255)
                      . +.-|+.|...|.
T Consensus        81 ~-~~~~i~iivGG~   93 (137)
T d1ccwa_          81 A-GLEGILLYVGGN   93 (137)
T ss_dssp             T-TCTTCEEEEEES
T ss_pred             h-ccCCCEEEEeCC
Confidence            5 334665665554

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=85.82  E-value=1.3  Score=33.02  Aligned_cols=61  Identities=11%  Similarity=0.080  Sum_probs=43.0

Q ss_pred             CCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHH
Q 025259           12 GKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQH   75 (255)
Q Consensus        12 ~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~   75 (255)
                      |.+||=.|+++|. -.+++.. .. +..|++++.++..++.+.+.... ...+.++..|..++..
T Consensus        75 G~~VLDlGcGsG~~~~~la~~-~~-~g~V~aVDiS~~~i~~a~~~a~~-~~ni~~i~~d~~~~~~  136 (230)
T d1g8sa_          75 DSKILYLGASAGTTPSHVADI-AD-KGIVYAIEYAPRIMRELLDACAE-RENIIPILGDANKPQE  136 (230)
T ss_dssp             TCEEEEESCCSSHHHHHHHHH-TT-TSEEEEEESCHHHHHHHHHHTTT-CTTEEEEECCTTCGGG
T ss_pred             CCEEEEeCEEcCHHHHHHHHh-CC-CCEEEEEeCcHHHHHHHHHHHhh-hcccceEEEeeccCcc
Confidence            7899999988775 3344432 22 24799999999988877665443 3467778888887654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=85.34  E-value=0.46  Score=33.24  Aligned_cols=35  Identities=20%  Similarity=0.246  Sum_probs=28.7

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCC--eEEEEeCCh
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGA--SVVISSRKQ   46 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~--~Vv~~~r~~   46 (255)
                      .||+|+|.|| |..|..+|..|.+.+.  +|+++.+++
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999987 4669999999999885  588887664

>d3bula2 c.23.6.1 (A:741-896) Methionine synthase, C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Cobalamin (vitamin B12)-binding domain
family: Cobalamin (vitamin B12)-binding domain
domain: Methionine synthase, C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=85.17  E-value=4.4  Score=28.03  Aligned_cols=64  Identities=13%  Similarity=0.162  Sum_probs=49.1

Q ss_pred             CchHHHHHHHHHH-cCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCC-CHHHHHHHHHHHHHH
Q 025259           22 QGIGLGVAERLGL-EGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVS-NEQHRKNLIDKTVEK   86 (255)
Q Consensus        22 ~giG~~~a~~l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~~~~~~~~~~~~   86 (255)
                      -.||..++..+++ .||+|+-.+.+.+ .+++.+.+.+.+.++..+.+=++ ....+..+++.+.+.
T Consensus        19 HdiG~~iv~~~l~~~G~~Vi~LG~~~p-~e~~~~~~~~~~~d~i~lS~l~~~~~~~~~~~~~~l~~~   84 (156)
T d3bula2          19 HDIGKNIVGVVLQCNNYEIVDLGVMVP-AEKILRTAKEVNADLIGLSGLITPSLDEMVNVAKEMERQ   84 (156)
T ss_dssp             CCHHHHHHHHHHHTTTCEEEECCSSBC-HHHHHHHHHHHTCSEEEEECCSTHHHHHHHHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHCCCEEEECCCCCC-HHHHHHHHHhhCCCEEEEecccccchHHHHHHHHHHHhc
Confidence            4799999999987 5999998887764 36677777777888888876655 466677777777765

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.75  E-value=0.36  Score=35.69  Aligned_cols=34  Identities=21%  Similarity=0.266  Sum_probs=28.6

Q ss_pred             CEEEEeCCCCchHHH-----HHHHHHHcCCeEEEEeCCh
Q 025259           13 KVAVVTASTQGIGLG-----VAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        13 k~vlVtG~~~giG~~-----~a~~l~~~G~~Vv~~~r~~   46 (255)
                      |+|.|+++.||.|+.     +|..|++.|.+|.++|-+.
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~D~   40 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDADI   40 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            689999999999874     5677888999999998764

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=84.65  E-value=0.46  Score=36.38  Aligned_cols=33  Identities=21%  Similarity=0.224  Sum_probs=28.9

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      .|+|.||+ -.|..+|..|++.|.+|+++.+.++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888876 8899999999999999999999764

>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: Chelatase-like
superfamily: "Helical backbone" metal receptor
family: Nitrogenase iron-molybdenum protein
domain: Nitrogenase iron-molybdenum protein, alpha chain
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.59  E-value=1  Score=37.57  Aligned_cols=81  Identities=14%  Similarity=0.103  Sum_probs=52.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      ..|+||+++|.|+. ....++++.|.+.|..|+.++......+.....++..+....  ..|-.|..++++++++.    
T Consensus       341 ~~l~Gkrv~i~~~~-~~~~~l~~~l~elGmevv~~~~~~~~~~d~~~~~~~~~~~~~--i~~d~~~~el~~~i~~~----  413 (477)
T d1m1na_         341 PRLEGKRVMLYIGG-LRPRHVIGAYEDLGMEVVGTGYEFAHNDDYDRTMKEMGDSTL--LYDDVTGYEFEEFVKRI----  413 (477)
T ss_dssp             HHHTTCEEEECBSS-SHHHHTHHHHHTTTCEEEEEEESSCCHHHHHTTTTTSCTTCE--EEESCBHHHHHHHHHHH----
T ss_pred             HhhcCCcEEEecCc-hhHHHHHHHHHHCCCEEEEEeecCCChHHHHHHHHhcCCCcE--EecCCCHHHHHHHHHhc----
Confidence            45899999998764 588899999988999988776543322222122222232222  23445677777777765    


Q ss_pred             CCCcEEEEC
Q 025259           88 GRIDVFVLN   96 (255)
Q Consensus        88 g~~d~lv~~   96 (255)
                       ++|+++-+
T Consensus       414 -~pDL~ig~  421 (477)
T d1m1na_         414 -KPDLIGSG  421 (477)
T ss_dssp             -CCSEEEEC
T ss_pred             -CCCEEEEC
Confidence             79998743

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=84.53  E-value=0.89  Score=33.48  Aligned_cols=105  Identities=10%  Similarity=0.098  Sum_probs=69.2

Q ss_pred             CCCEEEEeCCCCch-HHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHc
Q 025259           11 QGKVAVVTASTQGI-GLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKY   87 (255)
Q Consensus        11 ~~k~vlVtG~~~gi-G~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~   87 (255)
                      .+.+||=.|++.|- ...+++++...+++|+++|.+++-++...+.+.+.+  .++.+...|..+.            .+
T Consensus        39 ~~~~vLDlGCGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d~~~~------------~~  106 (225)
T d1im8a_          39 ADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHV------------EI  106 (225)
T ss_dssp             TTCEEEEESCTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSCTTTC------------CC
T ss_pred             CCCEEEEeccchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccchhhcc------------cc
Confidence            47789999966554 556666655578999999999999999988887654  4566666665431            11


Q ss_pred             CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           88 GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        88 g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      ...|+++.+.....       .+.++..           .+++.+...|+++|.+++.
T Consensus       107 ~~~d~i~~~~~l~~-------~~~~d~~-----------~~l~~i~~~LkpgG~li~~  146 (225)
T d1im8a_         107 KNASMVILNFTLQF-------LPPEDRI-----------ALLTKIYEGLNPNGVLVLS  146 (225)
T ss_dssp             CSEEEEEEESCGGG-------SCGGGHH-----------HHHHHHHHHEEEEEEEEEE
T ss_pred             ccceeeEEeeeccc-------cChhhHH-----------HHHHHHHHhCCCCceeecc
Confidence            35676665544321       1223322           3566677788888888764

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=84.49  E-value=2.1  Score=32.25  Aligned_cols=97  Identities=16%  Similarity=0.162  Sum_probs=68.9

Q ss_pred             CCEEEEeCCCCc-hHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHHHHcC
Q 025259           12 GKVAVVTASTQG-IGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTVEKYG   88 (255)
Q Consensus        12 ~k~vlVtG~~~g-iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~g   88 (255)
                      |.+||=.|+++| +...+++.+.. +..|+.++++++.++...+.+++.+  .++.+...|+.+.-      .     -.
T Consensus        86 G~rVLEiG~GsG~lt~~la~~v~~-~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~~~~------~-----~~  153 (250)
T d1yb2a1          86 GMDILEVGVGSGNMSSYILYALNG-KGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFI------S-----DQ  153 (250)
T ss_dssp             TCEEEEECCTTSHHHHHHHHHHTT-SSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCC------C-----SC
T ss_pred             cCEEEEeeeeCcHHHHHHHHHhCC-CcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeeeccc------c-----cc
Confidence            789999997766 45555555533 3479999999999999999888753  57889999987521      1     13


Q ss_pred             CCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           89 RIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        89 ~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                      .+|.++.+..     .+                    +.+++.+...|+++|+++..
T Consensus       154 ~fD~V~ld~p-----~p--------------------~~~l~~~~~~LKpGG~lv~~  185 (250)
T d1yb2a1         154 MYDAVIADIP-----DP--------------------WNHVQKIASMMKPGSVATFY  185 (250)
T ss_dssp             CEEEEEECCS-----CG--------------------GGSHHHHHHTEEEEEEEEEE
T ss_pred             eeeeeeecCC-----ch--------------------HHHHHHHHHhcCCCceEEEE
Confidence            6898887532     11                    23467777888888887753

>d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Apoptosis-inducing factor (AIF)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.28  E-value=2.2  Score=28.71  Aligned_cols=34  Identities=21%  Similarity=0.177  Sum_probs=27.0

Q ss_pred             CCEEEEeCCCCchHHHHHHHHH----HcCCeEEEEeCCh
Q 025259           12 GKVAVVTASTQGIGLGVAERLG----LEGASVVISSRKQ   46 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~----~~G~~Vv~~~r~~   46 (255)
                      .|+++|.|| |.+|.++|..|+    +.|.+|.++.+.+
T Consensus        37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~   74 (137)
T d1m6ia2          37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEK   74 (137)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence            678888865 889988888886    3588999887754

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=84.09  E-value=0.79  Score=34.58  Aligned_cols=35  Identities=23%  Similarity=0.336  Sum_probs=29.0

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHc-CCeEEEEe
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLE-GASVVISS   43 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~-G~~Vv~~~   43 (255)
                      .+|+||+++|-|- |.+|..+++.|+++ |+.|+.+.
T Consensus        28 ~~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vs   63 (239)
T d1gtma1          28 DTLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVS   63 (239)
T ss_dssp             SCSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred             CCcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecc
Confidence            3589999999987 66999999999864 88877653

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.08  E-value=0.72  Score=33.88  Aligned_cols=89  Identities=8%  Similarity=0.004  Sum_probs=58.2

Q ss_pred             CCCCEEEEeCCCCchHH-----HHHHHHHH----cCCeEEEEeCChhHHHHHHHHHH--------------HcCCeEEEE
Q 025259           10 FQGKVAVVTASTQGIGL-----GVAERLGL----EGASVVISSRKQKNVDKAVEKLK--------------ALGIEVIGI   66 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~-----~~a~~l~~----~G~~Vv~~~r~~~~~~~~~~~~~--------------~~~~~~~~~   66 (255)
                      ...-+++|.||+|.+-+     ++-..+..    .+..|++++|.+-..++..+.+.              ..-.++.++
T Consensus        18 ~~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~   97 (203)
T d1qkia1          18 SDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYV   97 (203)
T ss_dssp             SCCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECC
T ss_pred             CCCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhccc
Confidence            34568999999998864     33333332    24569999997644444444332              223478899


Q ss_pred             EecCCCHHHHHHHHHHHHHHc-C-CCcEEEECCC
Q 025259           67 ICHVSNEQHRKNLIDKTVEKY-G-RIDVFVLNAA   98 (255)
Q Consensus        67 ~~D~~~~~~~~~~~~~~~~~~-g-~~d~lv~~ag   98 (255)
                      .+|++++++..++-+.+.+.. + .-+.+++.|=
T Consensus        98 ~~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLAv  131 (203)
T d1qkia1          98 AGQYDDAASYQRLNSHMNALHLGSQANRLFYLAL  131 (203)
T ss_dssp             BCCTTCHHHHHHHHHHHHHTTTTTTSEEEEEECS
T ss_pred             cCcCCChhhHHHHHHHHHHHhcCCCcceEEEEec
Confidence            999999999999877776532 2 2346666664

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=83.90  E-value=0.52  Score=36.32  Aligned_cols=32  Identities=16%  Similarity=0.250  Sum_probs=26.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCCh
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQ   46 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~   46 (255)
                      .|+|.|| |-+|.++|.+|++.|. +|++++++.
T Consensus         3 dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~   35 (305)
T d1pj5a2           3 RIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP   35 (305)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred             CEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            4677775 5899999999999997 599998864

>d2fhpa1 c.66.1.46 (A:1-182) Putative methylase EF2452 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methylase EF2452
species: Enterococcus faecalis [TaxId: 1351]

Probab=83.72  E-value=5.6  Score=28.07  Aligned_cols=81  Identities=11%  Similarity=0.132  Sum_probs=56.5

Q ss_pred             cCCCCEEEEeC-CCCchHHHHHHHHHHcCCe-EEEEeCChhHHHHHHHHHHHcC--CeEEEEEecCCCHHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTA-STQGIGLGVAERLGLEGAS-VVISSRKQKNVDKAVEKLKALG--IEVIGIICHVSNEQHRKNLIDKTV   84 (255)
Q Consensus         9 ~l~~k~vlVtG-~~~giG~~~a~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~   84 (255)
                      .++|+++|=.. |+|.+|.+    .++.|+. |++++.+.+..+-+.+.++..+  .++.++..|+.      +.+++..
T Consensus        39 ~~~~~~vLDlfaGsG~~g~e----a~srGa~~v~~ve~~~~a~~~~~~N~~~~~~~~~~~i~~~D~~------~~l~~~~  108 (182)
T d2fhpa1          39 YFDGGMALDLYSGSGGLAIE----AVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDAN------RALEQFY  108 (182)
T ss_dssp             CCSSCEEEETTCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHH------HHHHHHH
T ss_pred             hcCCCEEEEcccccccccce----eeecchhHHHHHHHHHHHHHHHHHHhhhhhcccccccccccch------hhhhhhc
Confidence            46788877655 44556664    4568886 9999999999888888776654  36888887773      2344444


Q ss_pred             HHcCCCcEEEECCCC
Q 025259           85 EKYGRIDVFVLNAAV   99 (255)
Q Consensus        85 ~~~g~~d~lv~~ag~   99 (255)
                      ....++|+++....+
T Consensus       109 ~~~~~fDlIflDPPY  123 (182)
T d2fhpa1         109 EEKLQFDLVLLDPPY  123 (182)
T ss_dssp             HTTCCEEEEEECCCG
T ss_pred             ccCCCcceEEechhh
Confidence            444578999987754

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=83.66  E-value=0.43  Score=36.08  Aligned_cols=32  Identities=25%  Similarity=0.273  Sum_probs=27.5

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      +|+|.|| |--|...|..|+++|++|.++.+++
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788887 6679999999999999999998754

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=83.62  E-value=0.76  Score=32.42  Aligned_cols=38  Identities=26%  Similarity=0.347  Sum_probs=33.6

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChh
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQK   47 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~   47 (255)
                      -+.||+++|.|= |-+|+.+|+++...|++|+++..++-
T Consensus        20 ~laGk~vvV~GY-G~vGrG~A~~~rg~Ga~V~V~E~DPi   57 (163)
T d1v8ba1          20 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPI   57 (163)
T ss_dssp             CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred             eecCCEEEEecc-cccchhHHHHHHhCCCEEEEEecCch
Confidence            378999999874 57999999999999999999999873

>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: NTRC receiver domain
species: Salmonella typhimurium [TaxId: 90371]

Probab=83.53  E-value=4.2  Score=26.55  Aligned_cols=81  Identities=11%  Similarity=0.097  Sum_probs=55.1

Q ss_pred             CEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcE
Q 025259           13 KVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDV   92 (255)
Q Consensus        13 k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~   92 (255)
                      .+|||.--...+...+.+.|.+.|+.|..+....+.+    +.+++...++.+.-..+-+.+.++ +++++.+..+.+-+
T Consensus         4 ~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~----~~l~~~~~dlii~D~~mp~~~G~e-l~~~l~~~~~~~pi   78 (123)
T d1krwa_           4 GIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVL----AALASKTPDVLLSDIRMPGMDGLA-LLKQIKQRHPMLPV   78 (123)
T ss_dssp             CEEEEESSSHHHHHHHHHHHHHTTCEEEEESSSHHHH----HHHTTCCCSEEEECCSSSSSTTHH-HHHHHHHHSSSCCE
T ss_pred             CEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHH----HHHHhCCCCEEEehhhcCCchHHH-HHHHHHHhCCCCeE
Confidence            4799999999999999999999999998766655443    344444455554444444444443 56777777666666


Q ss_pred             EEECCC
Q 025259           93 FVLNAA   98 (255)
Q Consensus        93 lv~~ag   98 (255)
                      ++..+-
T Consensus        79 I~~t~~   84 (123)
T d1krwa_          79 IIMTAH   84 (123)
T ss_dssp             EESCCC
T ss_pred             EEEecC
Confidence            665543

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.49  E-value=2.5  Score=32.56  Aligned_cols=110  Identities=10%  Similarity=0.064  Sum_probs=66.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHc--CCeEEEEeCChhHHHHHHHHHHH-----cCCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLE--GASVVISSRKQKNVDKAVEKLKA-----LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~--G~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+.|+|||.|+++|   .+++.+++.  ..+|.++..+++-.+-..+.+..     ...++.++..|-         .+
T Consensus        76 ~~~pk~vLiiGgG~G---~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da---------~~  143 (285)
T d2o07a1          76 HPNPRKVLIIGGGDG---GVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDG---------FE  143 (285)
T ss_dssp             SSSCCEEEEEECTTS---HHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCH---------HH
T ss_pred             CcCcCeEEEeCCCch---HHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccH---------HH
Confidence            456789999998887   355566664  34689999998877766665532     256888888773         23


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      .+.+.-.+.|++|..+-- + .++     ..         ..-+..+.+.+...|+++|.++.-+
T Consensus       144 ~l~~~~~~yDvIi~D~~~-p-~~~-----~~---------~L~t~eF~~~~~~~L~~~Gi~v~q~  192 (285)
T d2o07a1         144 FMKQNQDAFDVIITDSSD-P-MGP-----AE---------SLFKESYYQLMKTALKEDGVLCCQG  192 (285)
T ss_dssp             HHHTCSSCEEEEEEECC---------------------------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCCEEEEcCCC-C-CCc-----cc---------ccccHHHHHHHHHhcCCCCeEEEec
Confidence            333333479999987632 1 110     00         0122334566677777778766543

>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.47  E-value=2.2  Score=29.71  Aligned_cols=74  Identities=8%  Similarity=-0.078  Sum_probs=40.4

Q ss_pred             EEEEeCCCCchHHHHHH-HHHH-c----CCeEEEEeCChhHHHHHHHHHHHc-CCeEEEEEecCCCHHHHHHHHHHHHHH
Q 025259           14 VAVVTASTQGIGLGVAE-RLGL-E----GASVVISSRKQKNVDKAVEKLKAL-GIEVIGIICHVSNEQHRKNLIDKTVEK   86 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~-~l~~-~----G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (255)
                      ++.|.||++ +|...+- .+++ .    +..++++|.++++++......... ...... ..- ++.+   +.+      
T Consensus         2 KIaiIGaGs-~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~-~~t-~~~~---~~l------   69 (162)
T d1up7a1           2 RIAVIGGGS-SYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKV-LIS-DTFE---GAV------   69 (162)
T ss_dssp             EEEEETTTC-TTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEE-EEC-SSHH---HHH------
T ss_pred             EEEEECCCH-HHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceE-EEe-cCcc---ccc------
Confidence            478888865 5544442 2332 1    347999999998876543332221 111111 111 2222   112      


Q ss_pred             cCCCcEEEECCCCC
Q 025259           87 YGRIDVFVLNAAVN  100 (255)
Q Consensus        87 ~g~~d~lv~~ag~~  100 (255)
                       ...|++|..+|..
T Consensus        70 -~~aDvVVita~~~   82 (162)
T d1up7a1          70 -VDAKYVIFQFRPG   82 (162)
T ss_dssp             -TTCSEEEECCCTT
T ss_pred             -CCCCEEEEecccC
Confidence             2689999999964

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=83.36  E-value=2.7  Score=32.53  Aligned_cols=111  Identities=10%  Similarity=0.063  Sum_probs=66.4

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcC--CeEEEEeCChhHHHHHHHHHHH-----cCCeEEEEEecCCCHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEG--ASVVISSRKQKNVDKAVEKLKA-----LGIEVIGIICHVSNEQHRKNLID   81 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G--~~Vv~~~r~~~~~~~~~~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~   81 (255)
                      ..+.|+|||.|+++|   .+++.+++..  ..|.++..+++-.+-..+.+..     ...++.++..|-.         +
T Consensus        87 ~~~pk~VLiiGgG~G---~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~---------~  154 (295)
T d1inla_          87 HPNPKKVLIIGGGDG---GTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGA---------E  154 (295)
T ss_dssp             SSSCCEEEEEECTTC---HHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHH---------H
T ss_pred             CCCCceEEEecCCch---HHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHH---------H
Confidence            456899999999887   4566776653  4699999998877766555432     2467888776642         2


Q ss_pred             HHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEEc
Q 025259           82 KTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFIS  146 (255)
Q Consensus        82 ~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~vs  146 (255)
                      .+.+.-.+.|++|...--.. ..+..             ++ -+..+.+.+...|+++|.++.-+
T Consensus       155 ~l~~~~~~yDvIi~D~~dp~-~~~~~-------------~L-~t~efy~~~~~~L~~~Gi~v~q~  204 (295)
T d1inla_         155 YVRKFKNEFDVIIIDSTDPT-AGQGG-------------HL-FTEEFYQACYDALKEDGVFSAET  204 (295)
T ss_dssp             HGGGCSSCEEEEEEEC------------------------C-CSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             HHhcCCCCCCEEEEcCCCCC-cCchh-------------hh-ccHHHHHHHHhhcCCCcEEEEec
Confidence            23333347999998653211 01110             11 12344566677787878766543

>d1t5la2 c.37.1.19 (A:415-595) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Tandem AAA-ATPase domain
domain: Nucleotide excision repair enzyme UvrB
species: Bacillus caldotenax [TaxId: 1395]

Probab=83.17  E-value=5.9  Score=27.99  Aligned_cols=63  Identities=19%  Similarity=0.231  Sum_probs=50.2

Q ss_pred             HHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Q 025259           33 GLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVFVLNAA   98 (255)
Q Consensus        33 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~lv~~ag   98 (255)
                      .+.+..++++..+....+.+...++..|.++..+..|++..+ -.+.+++..+  |.+++||..--
T Consensus        28 ~~~~~~~iif~~~~~~~~~~~~~l~~~g~~~~~~hg~~~~~e-R~~~l~~Fr~--g~~~vLVaTdv   90 (181)
T d1t5la2          28 VERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLE-RIEIIRDLRL--GKYDVLVGINL   90 (181)
T ss_dssp             HHTTCEEEEECSSHHHHHHHHHHHHTTTCCEEEECSSCCHHH-HHHHHHHHHH--TSCSEEEESCC
T ss_pred             HhcCCeEEEEeehhhhhHHHHHHHHhCCcceeEecCCccHHH-HHHHHHHHHC--CCCCEEEehhH
Confidence            346788999999999999999999999999999999987544 4555565544  68999998743

>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: 6-phospho-beta-glucosidase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=82.83  E-value=5.8  Score=27.63  Aligned_cols=76  Identities=5%  Similarity=-0.058  Sum_probs=42.9

Q ss_pred             EEEEeCC-CCchHHHHHHHHHHcC----CeEEEEeCChhH--HHHHHHHH----HHcCCeEEEEEecCCCHHHHHHHHHH
Q 025259           14 VAVVTAS-TQGIGLGVAERLGLEG----ASVVISSRKQKN--VDKAVEKL----KALGIEVIGIICHVSNEQHRKNLIDK   82 (255)
Q Consensus        14 ~vlVtG~-~~giG~~~a~~l~~~G----~~Vv~~~r~~~~--~~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~   82 (255)
                      ++.|.|| +.+.+.+++..++...    -.++++|.+++.  ++......    ...+.+...  ...+|..+   .+  
T Consensus         3 KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~--~~~td~~~---al--   75 (169)
T d1s6ya1           3 KIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEI--HLTLDRRR---AL--   75 (169)
T ss_dssp             EEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEE--EEESCHHH---HH--
T ss_pred             EEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCcee--eecCCchh---hc--
Confidence            4667776 5567777777766542    369999998754  33332211    122322222  22344322   11  


Q ss_pred             HHHHcCCCcEEEECCCCCC
Q 025259           83 TVEKYGRIDVFVLNAAVNP  101 (255)
Q Consensus        83 ~~~~~g~~d~lv~~ag~~~  101 (255)
                           ..-|++|+.+|...
T Consensus        76 -----~gaDvVv~ta~~~~   89 (169)
T d1s6ya1          76 -----DGADFVTTQFRVGG   89 (169)
T ss_dssp             -----TTCSEEEECCCTTH
T ss_pred             -----CCCCEEEEccccCC
Confidence                 26899999999753

>d2q4oa1 c.129.1.1 (A:8-190) Hypothetical protein At2g37210/T2N18.3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: MCP/YpsA-like
superfamily: MCP/YpsA-like
family: MoCo carrier protein-like
domain: Hypothetical protein At2g37210/T2N18.3
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=82.27  E-value=6.5  Score=27.82  Aligned_cols=12  Identities=17%  Similarity=0.158  Sum_probs=9.2

Q ss_pred             CCcEEEECCCCC
Q 025259           89 RIDVFVLNAAVN  100 (255)
Q Consensus        89 ~~d~lv~~ag~~  100 (255)
                      .-|.+|...|..
T Consensus       102 ~sdafIvlPGG~  113 (183)
T d2q4oa1         102 HSDAFIALPGGY  113 (183)
T ss_dssp             TCSEEEECSCCH
T ss_pred             hCceEEEeCCcc
Confidence            568888888864

>d1mvoa_ c.23.1.1 (A:) PhoP receiver domain {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: PhoP receiver domain
species: Bacillus subtilis [TaxId: 1423]

Probab=81.93  E-value=4.8  Score=26.10  Aligned_cols=82  Identities=13%  Similarity=0.119  Sum_probs=57.5

Q ss_pred             CCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCc
Q 025259           12 GKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRID   91 (255)
Q Consensus        12 ~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d   91 (255)
                      +|+|||.--..-+-..+...|.+.|+.|..+...++.+    +.+++...++.+.-..+-+.+.++ ++.+++.......
T Consensus         2 ~krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al----~~l~~~~~dlillD~~mp~~~G~~-~~~~~r~~~~~~~   76 (121)
T d1mvoa_           2 NKKILVVDDEESIVTLLQYNLERSGYDVITASDGEEAL----KKAETEKPDLIVLDVMLPKLDGIE-VCKQLRQQKLMFP   76 (121)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHH----HHHHHHCCSEEEEESSCSSSCHHH-HHHHHHHTTCCCC
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHH----HHHhcccccEEEecccccCCCCch-hhhhhhccCCCCE
Confidence            47899999999999999999999999988766655444    344445566766666666666654 4566776655566


Q ss_pred             EEEECCC
Q 025259           92 VFVLNAA   98 (255)
Q Consensus        92 ~lv~~ag   98 (255)
                      +++..+.
T Consensus        77 ii~lt~~   83 (121)
T d1mvoa_          77 ILMLTAK   83 (121)
T ss_dssp             EEEEECT
T ss_pred             EEEEEee
Confidence            6665543

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=81.87  E-value=0.25  Score=34.31  Aligned_cols=37  Identities=19%  Similarity=-0.054  Sum_probs=26.5

Q ss_pred             CCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHH
Q 025259           20 STQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKL   56 (255)
Q Consensus        20 ~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~   56 (255)
                      |+|-+|+++++.|.+.+..+.+++|++++++++.++.
T Consensus         6 G~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~   42 (153)
T d2i76a2           6 GTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVY   42 (153)
T ss_dssp             SCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHT
T ss_pred             eCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhcc
Confidence            5778999999988665544567899999888876653

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=81.67  E-value=0.76  Score=33.69  Aligned_cols=38  Identities=18%  Similarity=0.327  Sum_probs=32.4

Q ss_pred             ccCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCCh
Q 025259            8 KRFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQ   46 (255)
Q Consensus         8 ~~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~   46 (255)
                      .+++||+|+|.|++. .|..+|..+++.+..++.+.|..
T Consensus        28 ~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~   65 (235)
T d1w4xa2          28 VDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTP   65 (235)
T ss_dssp             CCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSC
T ss_pred             CCCCCCEEEEECCCc-cHHHHHHHHHhhhcccccccccc
Confidence            468999999998654 68999999999999988887765

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=81.60  E-value=5.1  Score=30.46  Aligned_cols=108  Identities=10%  Similarity=0.008  Sum_probs=63.0

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCC-eEEEEeCChhHHHHHHHHHH-----------HcCCeEEEEEecCCCHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGA-SVVISSRKQKNVDKAVEKLK-----------ALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~-~Vv~~~r~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~   76 (255)
                      ..+.++|||.|+++|.   +++++++.+. +|.++..+++-.+-....+.           ....++.++..|..     
T Consensus        70 ~~~p~~vLiiG~G~G~---~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~-----  141 (276)
T d1mjfa_          70 HPKPKRVLVIGGGDGG---TVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGF-----  141 (276)
T ss_dssp             SSCCCEEEEEECTTSH---HHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHH-----
T ss_pred             CCCCceEEEecCCchH---HHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHH-----
Confidence            4578999999998773   3344444443 58889998877665544331           12467888887763     


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                       ..++    +..+.|++|..+--.  .++...             ++ +..+.+.+...|+++|.++.-
T Consensus       142 -~~l~----~~~~yDvIi~D~~~~--~~~~~~-------------L~-t~eF~~~~~~~L~~~Gv~v~q  189 (276)
T d1mjfa_         142 -EFIK----NNRGFDVIIADSTDP--VGPAKV-------------LF-SEEFYRYVYDALNNPGIYVTQ  189 (276)
T ss_dssp             -HHHH----HCCCEEEEEEECCCC--C------------------TT-SHHHHHHHHHHEEEEEEEEEE
T ss_pred             -HHHh----ccCCCCEEEEeCCCC--CCCccc-------------cc-CHHHHHhhHhhcCCCceEEEe
Confidence             1122    235799999876531  111111             11 123346666778888876543

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.38  E-value=0.15  Score=39.14  Aligned_cols=48  Identities=8%  Similarity=-0.044  Sum_probs=34.7

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHH
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKA   58 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~   58 (255)
                      +.+|+++|=.|++.|+-..  ..+.+.+.+|+++|-++..++.+.+.++.
T Consensus        52 ~~~g~~vLDiGcG~g~~~~--~~~~~~~~~v~~~D~S~~~i~~~~~~~~~   99 (263)
T d2g72a1          52 EVSGRTLIDIGSGPTVYQL--LSACSHFEDITMTDFLEVNRQELGRWLQE   99 (263)
T ss_dssp             CSCCSEEEEETCTTCCGGG--TTGGGGCSEEEEECSCHHHHHHHHHHHTT
T ss_pred             CCCCcEEEEeccCCCHHHH--HHhcccCCeEEEEeCCHHHHHHHHHHHhc
Confidence            5678999999998885432  22234455799999999988877766544

>d1dbwa_ c.23.1.1 (A:) Transcriptional regulatory protein FixJ, receiver domain {Rhizobium meliloti [TaxId: 382]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional regulatory protein FixJ, receiver domain
species: Rhizobium meliloti [TaxId: 382]

Probab=80.85  E-value=5.4  Score=25.99  Aligned_cols=83  Identities=11%  Similarity=0.061  Sum_probs=55.6

Q ss_pred             CCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Q 025259           11 QGKVAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRI   90 (255)
Q Consensus        11 ~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   90 (255)
                      +..++||.--...+...+.+.|.+.|+.|..+.. .   ++..+.+++...++.+.-..+-+.+.+ .+++++++..+.+
T Consensus         2 ~~~~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~-~---~~al~~~~~~~~dlvi~D~~mp~~~G~-e~~~~lr~~~~~~   76 (123)
T d1dbwa_           2 QDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQS-A---EAFLAFAPDVRNGVLVTDLRMPDMSGV-ELLRNLGDLKINI   76 (123)
T ss_dssp             CCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESC-H---HHHHHHGGGCCSEEEEEECCSTTSCHH-HHHHHHHHTTCCC
T ss_pred             CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECC-H---HHHHHHHhhcCCcEEEEeccCccccch-HHHHHHHhcCCCC
Confidence            3468999999999999999999999999876443 3   333344455555555544444566554 4567777766667


Q ss_pred             cEEEECCC
Q 025259           91 DVFVLNAA   98 (255)
Q Consensus        91 d~lv~~ag   98 (255)
                      -+++..+-
T Consensus        77 ~iI~lt~~   84 (123)
T d1dbwa_          77 PSIVITGH   84 (123)
T ss_dssp             CEEEEECT
T ss_pred             eEEEEEee
Confidence            77666543

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.63  E-value=2  Score=31.61  Aligned_cols=108  Identities=9%  Similarity=0.040  Sum_probs=68.6

Q ss_pred             CCCCEEEEeCCCCchHHHHHHHHHHcC-CeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHc-
Q 025259           10 FQGKVAVVTASTQGIGLGVAERLGLEG-ASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKY-   87 (255)
Q Consensus        10 l~~k~vlVtG~~~giG~~~a~~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-   87 (255)
                      ..|++||-.|++.|+   .+..+++.+ .+|++++.++.-++...+.....+.++..+..|..          .+...+ 
T Consensus        52 ~~g~~VLdIGcG~G~---~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~----------~~~~~~~  118 (229)
T d1zx0a1          52 SKGGRVLEVGFGMAI---AASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWE----------DVAPTLP  118 (229)
T ss_dssp             TTCEEEEEECCTTSH---HHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHH----------HHGGGSC
T ss_pred             cCCCeEEEeeccchH---HHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhccccccccccccc----------ccccccc
Confidence            368899999988884   456677764 57999999999888888777666666766665421          111111 


Q ss_pred             -CCCcEEEECCCCCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHhcccCCCeEEEE
Q 025259           88 -GRIDVFVLNAAVNPYAADLLKTKESVLDKLWEINVKSSILLMQDAAPHMQKGSSVVFI  145 (255)
Q Consensus        88 -g~~d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~iv~v  145 (255)
                       +++|.+++.+-... ....   ...           -.-.+.+.+...|+++|.+++.
T Consensus       119 ~~~fD~i~fD~~~~~-~~~~---~~~-----------~~~~~~~~~~r~LkpGG~~~~~  162 (229)
T d1zx0a1         119 DGHFDGILYDTYPLS-EETW---HTH-----------QFNFIKNHAFRLLKPGGVLTYC  162 (229)
T ss_dssp             TTCEEEEEECCCCCB-GGGT---TTH-----------HHHHHHHTHHHHEEEEEEEEEC
T ss_pred             cccccceeecccccc-cccc---ccc-----------CHHHHHHHHHHHcCCCcEEEEE
Confidence             47888887654321 1100   011           1223455566778888888764

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=80.61  E-value=4.2  Score=28.83  Aligned_cols=83  Identities=11%  Similarity=0.063  Sum_probs=44.4

Q ss_pred             CCCCEEEEeCCCCc-------------hHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHH
Q 025259           10 FQGKVAVVTASTQG-------------IGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus        10 l~~k~vlVtG~~~g-------------iG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      +++|++++.|=|-.             -+..+.+.|-..+.+|+-.+.+-.........                     
T Consensus         1 ~~~~ti~~~GDS~~~g~~~~~~~~~~Gw~~~L~~~l~~~~~~v~N~gi~G~t~~~~~~~---------------------   59 (208)
T d2o14a2           1 VTNRTIYVGGDSTVCNYYPLNSSKQAGWGQMLPHYIDKHTFQVRNMASGGQIARGFRND---------------------   59 (208)
T ss_dssp             CCCCEEEEEECTTTSCCSSTTTCSBCCHHHHGGGTSCTTTCEEEECCCTTCCHHHHHHS---------------------
T ss_pred             CCCCEEEEEEcccccCcCCCCCCCCCCHHHHHHHHhCCCceEEEeCeechhhhccHhhh---------------------
Confidence            47899999997733             34445545444566665555544322221110                     


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCCCCCCCCcCCCCHHHHH
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAVNPYAADLLKTKESVLD  115 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~~~~~~~~~~~~~~~~~  115 (255)
                       ..+.++...+.+.|++|.+.|... .......+.+++.
T Consensus        60 -~~~~~~~~~~~~~D~vvi~~G~ND-~~~~~~~~~~~~~   96 (208)
T d2o14a2          60 -GQLEAILKYIKPGDYFMLQLGIND-TNPKHKESEAEFK   96 (208)
T ss_dssp             -SHHHHHHTTCCTTCEEEEECCTGG-GCGGGCCCHHHHH
T ss_pred             -hhHHHHHHhcCCCCEEEEEcCCCc-ccccccccHHHHH
Confidence             113333444456799999999764 2223344555443

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=80.59  E-value=0.27  Score=34.89  Aligned_cols=83  Identities=7%  Similarity=0.075  Sum_probs=53.4

Q ss_pred             EEEEeCCCCchHHHHHHHHHHc-CCeEE-EEeCChhHH-HHHHH--------------HHHHcCCeEEEEEecCCCHHHH
Q 025259           14 VAVVTASTQGIGLGVAERLGLE-GASVV-ISSRKQKNV-DKAVE--------------KLKALGIEVIGIICHVSNEQHR   76 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~-G~~Vv-~~~r~~~~~-~~~~~--------------~~~~~~~~~~~~~~D~~~~~~~   76 (255)
                      ++.|.|++|-.|+++++...+. ++.++ +++|..... ..-..              .+...-... -+..|++.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHHH
Confidence            5899999999999999999875 66644 455532210 00000              000000011 145899999999


Q ss_pred             HHHHHHHHHHcCCCcEEEECCCC
Q 025259           77 KNLIDKTVEKYGRIDVFVLNAAV   99 (255)
Q Consensus        77 ~~~~~~~~~~~g~~d~lv~~ag~   99 (255)
                      ...++...+.  +..+|+-.-|.
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999887765  68888877774

>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: Transcriptional activator sigm54 (NtrC1), N-terminal domain
species: Aquifex aeolicus [TaxId: 63363]

Probab=80.46  E-value=6.1  Score=26.28  Aligned_cols=79  Identities=15%  Similarity=0.149  Sum_probs=55.1

Q ss_pred             EEEEeCCCCchHHHHHHHHHHcCCeEEEEeCChhHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCcEE
Q 025259           14 VAVVTASTQGIGLGVAERLGLEGASVVISSRKQKNVDKAVEKLKALGIEVIGIICHVSNEQHRKNLIDKTVEKYGRIDVF   93 (255)
Q Consensus        14 ~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~l   93 (255)
                      +|||.--...+...+...|-+.|+.|..+...    ++..+.+.+...++.+.-..+-+.+.+ .+++++++..+.+-++
T Consensus         2 kILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~----~eAl~~l~~~~~dlvilD~~mp~~~G~-e~~~~lr~~~~~~piI   76 (137)
T d1ny5a1           2 NVLVIEDDKVFRGLLEEYLSMKGIKVESAERG----KEAYKLLSEKHFNVVLLDLLLPDVNGL-EILKWIKERSPETEVI   76 (137)
T ss_dssp             EEEEECCCHHHHHHHHHHHHHHTCEEEEESSH----HHHHHHHHHSCCSEEEEESBCSSSBHH-HHHHHHHHHCTTSEEE
T ss_pred             EEEEEecCHHHHHHHHHHHHHCCCEEEEECCH----HHHHHHhhccccccchHHHhhhhhhHH-HHHHHHHHhCCCCCEE
Confidence            47778778888888888888899998865443    333445555566676666666676665 4567787776677777


Q ss_pred             EECC
Q 025259           94 VLNA   97 (255)
Q Consensus        94 v~~a   97 (255)
                      +..+
T Consensus        77 ~lT~   80 (137)
T d1ny5a1          77 VITG   80 (137)
T ss_dssp             EEEE
T ss_pred             EEEC
Confidence            7654

>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: ATC-like
superfamily: Aspartate/ornithine carbamoyltransferase
family: Aspartate/ornithine carbamoyltransferase
domain: Ornithine transcarbamoylase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=80.40  E-value=5.6  Score=27.50  Aligned_cols=37  Identities=16%  Similarity=0.188  Sum_probs=33.1

Q ss_pred             cCCCCEEEEeCCCCchHHHHHHHHHHcCCeEEEEeCC
Q 025259            9 RFQGKVAVVTASTQGIGLGVAERLGLEGASVVISSRK   45 (255)
Q Consensus         9 ~l~~k~vlVtG~~~giG~~~a~~l~~~G~~Vv~~~r~   45 (255)
                      +|+|++|++.|-.+.+...++..+...|+++.+++-.
T Consensus         1 sl~gl~Ia~VGD~~nv~~Sli~~l~~~g~~v~~~~P~   37 (163)
T d1pvva2           1 TIKGVKVVYVGDGNNVAHSLMIAGTKLGADVVVATPE   37 (163)
T ss_dssp             CCTTCEEEEESCCCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEeccc
Confidence            4789999999999999999999999999999888653